Patl_3495 66c2e0e99d9bfa402e669928c976146f 501 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 11 86 6.1E-10 T 11-10-2018 IPR011933 Double transmembrane domain Patl_3495 66c2e0e99d9bfa402e669928c976146f 501 Pfam PF07584 Aerotolerance regulator N-terminal 12 84 6.9E-6 T 11-10-2018 IPR024163 Aerotolerance regulator, N-terminal Patl_1863 08a9d3410799025e45c830b6f553d4dd 781 SUPERFAMILY SSF56935 109 781 1.8E-84 T 11-10-2018 Patl_1863 08a9d3410799025e45c830b6f553d4dd 781 Pfam PF07715 TonB-dependent Receptor Plug Domain 123 231 1.6E-11 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1863 08a9d3410799025e45c830b6f553d4dd 781 Pfam PF00593 TonB dependent receptor 255 779 4.6E-36 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1863 08a9d3410799025e45c830b6f553d4dd 781 Gene3D G3DSA:2.40.170.20 250 781 3.8E-56 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_1863 08a9d3410799025e45c830b6f553d4dd 781 Gene3D G3DSA:2.170.130.10 108 235 2.4E-21 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 Gene3D G3DSA:3.30.2090.10 181 278 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 Gene3D G3DSA:3.30.70.1430 572 673 0.0 T 11-10-2018 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 SUPERFAMILY SSF82693 40 133 1.36E-27 T 11-10-2018 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 Gene3D G3DSA:3.30.70.1320 135 335 0.0 T 11-10-2018 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 Gene3D G3DSA:3.30.70.1430 40 822 0.0 T 11-10-2018 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 SUPERFAMILY SSF82693 570 676 8.02E-24 T 11-10-2018 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 SUPERFAMILY SSF82693 138 333 6.54E-24 T 11-10-2018 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 SUPERFAMILY SSF82866 299 499 5.62E-48 T 11-10-2018 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 SUPERFAMILY SSF82866 836 1032 7.46E-46 T 11-10-2018 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 SUPERFAMILY SSF82693 677 862 7.32E-28 T 11-10-2018 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 PRINTS PR00702 Acriflavin resistance protein family signature 626 640 5.5E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.5E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 5.5E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 PRINTS PR00702 Acriflavin resistance protein family signature 557 574 5.5E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 5.5E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 5.5E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 5.5E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 5.5E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.5E-89 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1034 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 SUPERFAMILY SSF82714 185 275 1.09E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 Gene3D G3DSA:1.20.1640.10 10 517 0.0 T 11-10-2018 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 SUPERFAMILY SSF82714 727 812 5.1E-22 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 Gene3D G3DSA:1.20.1640.10 518 1028 0.0 T 11-10-2018 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 Gene3D G3DSA:3.30.70.1440 674 871 0.0 T 11-10-2018 Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 Gene3D G3DSA:3.30.2090.10 726 814 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_0738 99e097c812b6dbf754f8e835e2136c7d 1055 Pfam PF00873 AcrB/AcrD/AcrF family 3 1031 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0671 af2d4ff3c162ef33f7d090d5f3397e1c 376 SMART SM00842 13 180 4.0E-4 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Patl_0671 af2d4ff3c162ef33f7d090d5f3397e1c 376 Gene3D G3DSA:3.30.420.40 186 336 2.2E-57 T 11-10-2018 Patl_0671 af2d4ff3c162ef33f7d090d5f3397e1c 376 Pfam PF11104 Type IV pilus assembly protein PilM; 15 371 6.0E-131 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM Patl_0671 af2d4ff3c162ef33f7d090d5f3397e1c 376 PIRSF PIRSF019169 2 372 2.8E-109 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM Patl_0671 af2d4ff3c162ef33f7d090d5f3397e1c 376 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 11 371 6.4E-70 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM Patl_0671 af2d4ff3c162ef33f7d090d5f3397e1c 376 Gene3D G3DSA:3.30.1490.300 89 148 2.2E-57 T 11-10-2018 Patl_0671 af2d4ff3c162ef33f7d090d5f3397e1c 376 Gene3D G3DSA:3.30.420.40 14 369 2.2E-57 T 11-10-2018 Patl_0671 af2d4ff3c162ef33f7d090d5f3397e1c 376 SUPERFAMILY SSF53067 13 336 2.36E-7 T 11-10-2018 Patl_0671 af2d4ff3c162ef33f7d090d5f3397e1c 376 SUPERFAMILY SSF53067 53 176 1.66E-12 T 11-10-2018 Patl_3047 ced99de7865c3b8362602e8edd44c8ad 568 Pfam PF01514 Secretory protein of YscJ/FliF family 50 237 2.2E-54 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF Patl_3047 ced99de7865c3b8362602e8edd44c8ad 568 Pfam PF08345 Flagellar M-ring protein C-terminal 270 438 1.6E-44 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal Patl_3047 ced99de7865c3b8362602e8edd44c8ad 568 Gene3D G3DSA:3.30.300.30 139 238 2.7E-12 T 11-10-2018 Patl_3047 ced99de7865c3b8362602e8edd44c8ad 568 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 38 567 6.6E-77 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Patl_3047 ced99de7865c3b8362602e8edd44c8ad 568 PIRSF PIRSF004862 23 568 3.0E-129 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Patl_3047 ced99de7865c3b8362602e8edd44c8ad 568 PRINTS PR01009 Flagellar M-ring protein signature 170 184 5.3E-25 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Patl_3047 ced99de7865c3b8362602e8edd44c8ad 568 PRINTS PR01009 Flagellar M-ring protein signature 283 301 5.3E-25 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Patl_3047 ced99de7865c3b8362602e8edd44c8ad 568 PRINTS PR01009 Flagellar M-ring protein signature 362 386 5.3E-25 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Patl_3047 ced99de7865c3b8362602e8edd44c8ad 568 PRINTS PR01009 Flagellar M-ring protein signature 213 231 5.3E-25 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Patl_3047 ced99de7865c3b8362602e8edd44c8ad 568 PRINTS PR01009 Flagellar M-ring protein signature 138 156 5.3E-25 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Patl_0107 f031e7e49d0d5e109e47be49759f7c60 158 PIRSF PIRSF006092 2 158 1.8E-42 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Patl_0107 f031e7e49d0d5e109e47be49759f7c60 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 26.779 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Patl_0107 f031e7e49d0d5e109e47be49759f7c60 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Patl_0107 f031e7e49d0d5e109e47be49759f7c60 158 Gene3D G3DSA:1.10.287.180 1 76 4.9E-28 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Patl_0107 f031e7e49d0d5e109e47be49759f7c60 158 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 50.471 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 Patl_0107 f031e7e49d0d5e109e47be49759f7c60 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Patl_0107 f031e7e49d0d5e109e47be49759f7c60 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.3E-23 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Patl_0107 f031e7e49d0d5e109e47be49759f7c60 158 Gene3D G3DSA:3.10.50.30 77 158 1.9E-32 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Patl_0107 f031e7e49d0d5e109e47be49759f7c60 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 1.1E-23 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Patl_0107 f031e7e49d0d5e109e47be49759f7c60 158 SUPERFAMILY SSF54534 80 156 4.97E-19 T 11-10-2018 Patl_0107 f031e7e49d0d5e109e47be49759f7c60 158 SUPERFAMILY SSF46557 3 78 3.14E-25 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Patl_0107 f031e7e49d0d5e109e47be49759f7c60 158 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 158 1.7E-72 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 Patl_3879 2ade4aa0f4f419eca97abfa5bd3c889f 453 Pfam PF12804 MobA-like NTP transferase domain 5 128 4.1E-22 T 11-10-2018 IPR025877 MobA-like NTP transferase Patl_3879 2ade4aa0f4f419eca97abfa5bd3c889f 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 315 347 2.9E-5 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_3879 2ade4aa0f4f419eca97abfa5bd3c889f 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 41.783 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Patl_3879 2ade4aa0f4f419eca97abfa5bd3c889f 453 SUPERFAMILY SSF53448 2 249 1.15E-60 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3879 2ade4aa0f4f419eca97abfa5bd3c889f 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Patl_3879 2ade4aa0f4f419eca97abfa5bd3c889f 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 9.8E-191 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Patl_3879 2ade4aa0f4f419eca97abfa5bd3c889f 453 Gene3D G3DSA:3.90.550.10 2 224 1.1E-66 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3879 2ade4aa0f4f419eca97abfa5bd3c889f 453 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 281 313 1.4E-5 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_3879 2ade4aa0f4f419eca97abfa5bd3c889f 453 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 392 426 2.0E-8 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_3879 2ade4aa0f4f419eca97abfa5bd3c889f 453 Gene3D G3DSA:2.160.10.10 225 452 5.3E-67 T 11-10-2018 Patl_3879 2ade4aa0f4f419eca97abfa5bd3c889f 453 SUPERFAMILY SSF51161 218 450 7.07E-50 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 SMART SM00052 1241 1487 3.3E-105 T 11-10-2018 IPR001633 EAL domain Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 SUPERFAMILY SSF63829 43 175 4.09E-9 T 11-10-2018 Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 SUPERFAMILY SSF55073 1079 1233 2.9E-45 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 SUPERFAMILY SSF55785 856 947 9.9E-10 T 11-10-2018 IPR035965 PAS domain superfamily Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 Pfam PF00563 EAL domain 1249 1482 1.8E-67 T 11-10-2018 IPR001633 EAL domain Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 SMART SM00086 901 944 8.1 T 11-10-2018 IPR001610 PAC motif Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 SMART SM00086 1021 1063 8.9E-5 T 11-10-2018 IPR001610 PAC motif Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 Gene3D G3DSA:2.60.40.10 666 794 2.1E-25 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 SUPERFAMILY SSF50969 326 615 5.57E-15 T 11-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 Gene3D G3DSA:3.30.450.20 822 939 2.4E-18 T 11-10-2018 Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 Gene3D G3DSA:2.130.10.10 407 653 8.1E-24 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 Pfam PF08447 PAS fold 860 937 9.1E-13 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1072 1229 2.4E-34 T 11-10-2018 IPR000160 GGDEF domain Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 SUPERFAMILY SSF141868 1246 1496 2.48E-83 T 11-10-2018 IPR035919 EAL domain superfamily Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 Gene3D G3DSA:3.30.70.270 1069 1244 7.4E-57 T 11-10-2018 Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 Pfam PF13426 PAS domain 963 1061 8.8E-12 T 11-10-2018 IPR000014 PAS domain Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1074 1227 5.2E-43 T 11-10-2018 IPR000160 GGDEF domain Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 Gene3D G3DSA:3.30.450.20 946 1066 1.8E-25 T 11-10-2018 Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 Pfam PF07495 Y_Y_Y domain 728 784 1.5E-12 T 11-10-2018 IPR011123 Two component regulator three Y Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 Gene3D G3DSA:3.20.20.450 1245 1496 4.8E-94 T 11-10-2018 IPR035919 EAL domain superfamily Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 948 1070 2.2E-15 T 11-10-2018 IPR000014 PAS domain Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 SMART SM00267 1063 1231 1.6E-57 T 11-10-2018 IPR000160 GGDEF domain Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 Gene3D G3DSA:2.130.10.10 30 346 2.5E-66 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 SUPERFAMILY SSF55785 958 1061 1.92E-18 T 11-10-2018 IPR035965 PAS domain superfamily Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 Pfam PF07494 Two component regulator propeller 86 109 0.012 T 11-10-2018 IPR011110 Two component regulator propeller Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 Pfam PF07494 Two component regulator propeller 41 64 0.0034 T 11-10-2018 IPR011110 Two component regulator propeller Patl_1665 68a60d479bf6593f3e100404954cd36e 1505 Pfam PF07494 Two component regulator propeller 264 286 0.0013 T 11-10-2018 IPR011110 Two component regulator propeller Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 Pfam PF00072 Response regulator receiver domain 1099 1209 8.1E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 Gene3D G3DSA:1.10.10.60 1235 1341 2.1E-26 T 11-10-2018 Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 Pfam PF12833 Helix-turn-helix domain 1262 1338 8.6E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1009 1027 8.8E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 PRINTS PR00344 Bacterial sensor protein C-terminal signature 992 1002 8.8E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1033 1046 8.8E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 PRINTS PR00344 Bacterial sensor protein C-terminal signature 974 988 8.8E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 SUPERFAMILY SSF47384 811 892 4.51E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 SUPERFAMILY SSF52172 1097 1222 2.56E-38 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 Gene3D G3DSA:2.130.10.10 35 332 2.6E-15 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 SMART SM00387 937 1049 1.4E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 SUPERFAMILY SSF55874 881 1045 4.71E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 Gene3D G3DSA:2.60.40.10 642 769 2.6E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 Pfam PF00512 His Kinase A (phospho-acceptor) domain 825 888 6.2E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 Gene3D G3DSA:3.40.50.2300 1083 1227 2.5E-36 T 11-10-2018 Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 SMART SM00448 1097 1209 3.7E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 SMART SM00388 824 891 4.0E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 Gene3D G3DSA:1.10.287.130 789 889 4.1E-15 T 11-10-2018 Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 SUPERFAMILY SSF46689 1292 1338 1.48E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 SUPERFAMILY SSF50998 55 511 5.41E-6 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 SMART SM00342 1256 1339 1.4E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 Gene3D G3DSA:3.30.565.10 898 1056 3.1E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 939 1047 2.2E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1836 ebed4b988dcfa4aa95d9894a2e1e1b1b 1341 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1293 1335 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Patl_3202 a9e9604bdd59869df1e4102f5f38408b 224 SUPERFAMILY SSF159270 23 221 3.53E-50 T 11-10-2018 IPR023373 YmcC-like superfamily Patl_3202 a9e9604bdd59869df1e4102f5f38408b 224 Gene3D G3DSA:2.40.360.10 21 222 2.1E-59 T 11-10-2018 IPR023373 YmcC-like superfamily Patl_3202 a9e9604bdd59869df1e4102f5f38408b 224 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 16 217 3.5E-58 T 11-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB Patl_2516 4abb0f4005c0fda6e46dd678b8ba349f 278 SMART SM00382 25 183 7.8E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2516 4abb0f4005c0fda6e46dd678b8ba349f 278 SUPERFAMILY SSF52540 9 272 6.38E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2516 4abb0f4005c0fda6e46dd678b8ba349f 278 Gene3D G3DSA:3.40.50.300 4 206 7.7E-29 T 11-10-2018 Patl_2516 4abb0f4005c0fda6e46dd678b8ba349f 278 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 175 5.7E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Patl_2516 4abb0f4005c0fda6e46dd678b8ba349f 278 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 113 131 7.3E-5 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Patl_2516 4abb0f4005c0fda6e46dd678b8ba349f 278 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 29 47 7.3E-5 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Patl_4041 300c49fd065a90967c6a6f7798db5e84 328 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 12 328 3.1E-145 T 11-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 Patl_4041 300c49fd065a90967c6a6f7798db5e84 328 PIRSF PIRSF029693 2 328 1.6E-145 T 11-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 Patl_1503 dd38ff81356271402484e9cf5b8115d6 751 Gene3D G3DSA:1.25.40.10 491 741 5.1E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1503 dd38ff81356271402484e9cf5b8115d6 751 Gene3D G3DSA:1.25.40.10 375 490 2.9E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1503 dd38ff81356271402484e9cf5b8115d6 751 SUPERFAMILY SSF81901 419 648 9.15E-24 T 11-10-2018 Patl_1503 dd38ff81356271402484e9cf5b8115d6 751 SMART SM00028 440 473 18.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1503 dd38ff81356271402484e9cf5b8115d6 751 SMART SM00028 582 615 62.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1503 dd38ff81356271402484e9cf5b8115d6 751 SMART SM00028 548 581 1.2E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1503 dd38ff81356271402484e9cf5b8115d6 751 SMART SM00028 621 654 3.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1503 dd38ff81356271402484e9cf5b8115d6 751 SMART SM00028 704 737 190.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1503 dd38ff81356271402484e9cf5b8115d6 751 Pfam PF13176 Tetratricopeptide repeat 550 581 0.0023 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2085 08be7bfeeb10d216075ef6e8476a8684 264 SMART SM00419 177 225 1.3E-13 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Patl_2085 08be7bfeeb10d216075ef6e8476a8684 264 Pfam PF13545 Crp-like helix-turn-helix domain 158 232 7.3E-19 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Patl_2085 08be7bfeeb10d216075ef6e8476a8684 264 SUPERFAMILY SSF51206 36 150 2.75E-21 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like Patl_2085 08be7bfeeb10d216075ef6e8476a8684 264 SMART SM00100 21 141 4.0E-7 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Patl_2085 08be7bfeeb10d216075ef6e8476a8684 264 Gene3D G3DSA:1.10.10.10 156 236 4.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2085 08be7bfeeb10d216075ef6e8476a8684 264 ProSitePatterns PS00042 Crp-type HTH domain signature. 185 208 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 Patl_2085 08be7bfeeb10d216075ef6e8476a8684 264 SUPERFAMILY SSF46785 157 233 3.1E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2085 08be7bfeeb10d216075ef6e8476a8684 264 Gene3D G3DSA:2.60.120.10 35 152 1.2E-29 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_2085 08be7bfeeb10d216075ef6e8476a8684 264 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 199 214 1.4E-10 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Patl_2085 08be7bfeeb10d216075ef6e8476a8684 264 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 183 199 1.4E-10 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Patl_2085 08be7bfeeb10d216075ef6e8476a8684 264 Pfam PF00027 Cyclic nucleotide-binding domain 41 125 3.9E-13 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Patl_1904 7feec3a477917a4c266ddef0dab17cef 688 SUPERFAMILY SSF51445 199 392 2.22E-16 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_1904 7feec3a477917a4c266ddef0dab17cef 688 Gene3D G3DSA:3.20.20.80 56 453 6.3E-89 T 11-10-2018 Patl_1904 7feec3a477917a4c266ddef0dab17cef 688 Gene3D G3DSA:2.60.120.1200 556 682 2.0E-42 T 11-10-2018 Patl_1839 d088a6206cec289b3be40d19231b8328 822 ProSitePatterns PS00211 ABC transporters family signature. 714 728 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_1839 d088a6206cec289b3be40d19231b8328 822 Gene3D G3DSA:3.40.50.300 486 820 3.5E-126 T 11-10-2018 Patl_1839 d088a6206cec289b3be40d19231b8328 822 Pfam PF00005 ABC transporter 492 744 6.2E-7 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1839 d088a6206cec289b3be40d19231b8328 822 Gene3D G3DSA:1.20.1580.10 86 359 3.1E-176 T 11-10-2018 Patl_1839 d088a6206cec289b3be40d19231b8328 822 SUPERFAMILY SSF52540 3 441 4.75E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1839 d088a6206cec289b3be40d19231b8328 822 Gene3D G3DSA:1.20.1580.10 598 755 3.5E-126 T 11-10-2018 Patl_1839 d088a6206cec289b3be40d19231b8328 822 SUPERFAMILY SSF52540 489 793 3.7E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1839 d088a6206cec289b3be40d19231b8328 822 Gene3D G3DSA:3.40.50.300 1 460 3.1E-176 T 11-10-2018 Patl_1839 d088a6206cec289b3be40d19231b8328 822 Gene3D G3DSA:1.10.8.280 144 268 3.1E-176 T 11-10-2018 Patl_1839 d088a6206cec289b3be40d19231b8328 822 ProSitePatterns PS00211 ABC transporters family signature. 359 373 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_0638 21b06d086dec2cfb770f4973f82f27c2 878 Gene3D G3DSA:2.60.120.260 707 846 6.2E-20 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0638 21b06d086dec2cfb770f4973f82f27c2 878 Gene3D G3DSA:2.60.120.260 482 603 3.1E-18 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0638 21b06d086dec2cfb770f4973f82f27c2 878 Gene3D G3DSA:3.40.50.200 149 477 6.9E-62 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Patl_0638 21b06d086dec2cfb770f4973f82f27c2 878 Pfam PF05345 Putative Ig domain 678 715 8.6E-9 T 11-10-2018 IPR008009 Putative Ig Patl_0638 21b06d086dec2cfb770f4973f82f27c2 878 PRINTS PR00723 Subtilisin serine protease family (S8) signature 247 260 8.8E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Patl_0638 21b06d086dec2cfb770f4973f82f27c2 878 PRINTS PR00723 Subtilisin serine protease family (S8) signature 425 441 8.8E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Patl_0638 21b06d086dec2cfb770f4973f82f27c2 878 PRINTS PR00723 Subtilisin serine protease family (S8) signature 186 205 8.8E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Patl_0638 21b06d086dec2cfb770f4973f82f27c2 878 SUPERFAMILY SSF49313 641 728 1.88E-10 T 11-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 Patl_0638 21b06d086dec2cfb770f4973f82f27c2 878 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 426 436 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Patl_0638 21b06d086dec2cfb770f4973f82f27c2 878 Pfam PF00082 Subtilase family 186 464 3.5E-39 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Patl_0638 21b06d086dec2cfb770f4973f82f27c2 878 SUPERFAMILY SSF52743 171 477 5.37E-56 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Patl_0638 21b06d086dec2cfb770f4973f82f27c2 878 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 251 261 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site Patl_0638 21b06d086dec2cfb770f4973f82f27c2 878 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 191 202 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Patl_4080 068a97cf0e55a0c9bf796c2438180a63 418 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 410 8.3E-39 T 11-10-2018 IPR000160 GGDEF domain Patl_4080 068a97cf0e55a0c9bf796c2438180a63 418 Pfam PF00072 Response regulator receiver domain 128 237 2.7E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4080 068a97cf0e55a0c9bf796c2438180a63 418 SUPERFAMILY SSF55073 262 410 1.8E-39 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_4080 068a97cf0e55a0c9bf796c2438180a63 418 SUPERFAMILY SSF52172 3 120 1.02E-9 T 11-10-2018 IPR011006 CheY-like superfamily Patl_4080 068a97cf0e55a0c9bf796c2438180a63 418 SUPERFAMILY SSF52172 127 248 1.07E-22 T 11-10-2018 IPR011006 CheY-like superfamily Patl_4080 068a97cf0e55a0c9bf796c2438180a63 418 Pfam PF00990 Diguanylate cyclase, GGDEF domain 257 408 6.6E-36 T 11-10-2018 IPR000160 GGDEF domain Patl_4080 068a97cf0e55a0c9bf796c2438180a63 418 Gene3D G3DSA:3.30.70.270 252 413 1.6E-45 T 11-10-2018 Patl_4080 068a97cf0e55a0c9bf796c2438180a63 418 Gene3D G3DSA:3.40.50.2300 1 124 9.7E-9 T 11-10-2018 Patl_4080 068a97cf0e55a0c9bf796c2438180a63 418 SMART SM00448 126 240 3.2E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4080 068a97cf0e55a0c9bf796c2438180a63 418 SMART SM00448 3 116 0.1 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4080 068a97cf0e55a0c9bf796c2438180a63 418 Gene3D G3DSA:3.40.50.2300 127 251 8.0E-23 T 11-10-2018 Patl_4080 068a97cf0e55a0c9bf796c2438180a63 418 SMART SM00267 246 412 2.1E-40 T 11-10-2018 IPR000160 GGDEF domain Patl_3384 b8bc37fbae74bbc7092862baf1dc5e2a 705 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 4 698 26.91 T 11-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 Patl_3384 b8bc37fbae74bbc7092862baf1dc5e2a 705 Gene3D G3DSA:3.40.50.150 6 250 1.4E-99 T 11-10-2018 Patl_3384 b8bc37fbae74bbc7092862baf1dc5e2a 705 Pfam PF01266 FAD dependent oxidoreductase 285 673 1.7E-41 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Patl_3384 b8bc37fbae74bbc7092862baf1dc5e2a 705 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 285 702 1.4E-124 T 11-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 Patl_3384 b8bc37fbae74bbc7092862baf1dc5e2a 705 Gene3D G3DSA:3.30.9.10 370 609 4.4E-132 T 11-10-2018 Patl_3384 b8bc37fbae74bbc7092862baf1dc5e2a 705 Gene3D G3DSA:3.50.50.60 285 700 4.4E-132 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3384 b8bc37fbae74bbc7092862baf1dc5e2a 705 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 239 3.4E-43 T 11-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 Patl_3384 b8bc37fbae74bbc7092862baf1dc5e2a 705 SUPERFAMILY SSF51905 283 702 3.69E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0936 0f80a71e9c95fbba42ce2814697d63a2 350 PIRSF PIRSF018266 8 349 1.9E-72 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Patl_0936 0f80a71e9c95fbba42ce2814697d63a2 350 Pfam PF04773 FecR protein 125 216 2.3E-17 T 11-10-2018 IPR006860 FecR protein Patl_0936 0f80a71e9c95fbba42ce2814697d63a2 350 Pfam PF16344 Domain of unknown function (DUF4974) 246 336 9.4E-10 T 11-10-2018 IPR032508 Protein FecR, C-terminal Patl_0936 0f80a71e9c95fbba42ce2814697d63a2 350 Gene3D G3DSA:3.55.50.30 272 346 1.1E-10 T 11-10-2018 Patl_0936 0f80a71e9c95fbba42ce2814697d63a2 350 Pfam PF16220 Domain of unknown function (DUF4880) 16 58 1.0E-8 T 11-10-2018 IPR032623 FecR, N-terminal Patl_0936 0f80a71e9c95fbba42ce2814697d63a2 350 Gene3D G3DSA:2.60.120.1440 112 254 3.1E-24 T 11-10-2018 Patl_4236 cbf67b52e0be08821ad9ce4d348f267a 205 SUPERFAMILY SSF55729 4 202 1.45E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_4236 cbf67b52e0be08821ad9ce4d348f267a 205 Gene3D G3DSA:3.40.630.30 3 205 1.3E-26 T 11-10-2018 Patl_4236 cbf67b52e0be08821ad9ce4d348f267a 205 Pfam PF00583 Acetyltransferase (GNAT) family 54 181 2.0E-11 T 11-10-2018 IPR000182 GNAT domain Patl_2510 bb81e960b9620569b053d2b6807c5b6e 751 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 34 1.2E-6 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Patl_2510 bb81e960b9620569b053d2b6807c5b6e 751 SUPERFAMILY SSF56003 323 746 2.22E-114 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Patl_2510 bb81e960b9620569b053d2b6807c5b6e 751 SMART SM01008 211 300 2.2E-12 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Patl_2510 bb81e960b9620569b053d2b6807c5b6e 751 Gene3D G3DSA:3.30.365.10 590 748 2.2E-32 T 11-10-2018 Patl_2510 bb81e960b9620569b053d2b6807c5b6e 751 SUPERFAMILY SSF56003 21 244 8.37E-43 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Patl_2510 bb81e960b9620569b053d2b6807c5b6e 751 Gene3D G3DSA:3.30.365.10 352 443 2.8E-56 T 11-10-2018 Patl_2510 bb81e960b9620569b053d2b6807c5b6e 751 Gene3D G3DSA:3.90.1170.50 183 295 1.1E-8 T 11-10-2018 Patl_2510 bb81e960b9620569b053d2b6807c5b6e 751 Gene3D G3DSA:3.30.365.10 44 182 3.0E-24 T 11-10-2018 Patl_2510 bb81e960b9620569b053d2b6807c5b6e 751 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 37 180 1.4E-17 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Patl_2510 bb81e960b9620569b053d2b6807c5b6e 751 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 326 604 1.7E-38 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Patl_2510 bb81e960b9620569b053d2b6807c5b6e 751 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 622 700 1.3E-11 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Patl_2510 bb81e960b9620569b053d2b6807c5b6e 751 Gene3D G3DSA:3.30.365.10 328 551 2.8E-56 T 11-10-2018 Patl_2510 bb81e960b9620569b053d2b6807c5b6e 751 PIRSF PIRSF036389 1 751 1.3E-248 T 11-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related Patl_3978 ad3fe80020195aa3bad35112a6ad03e5 83 Pfam PF17209 Hfq protein 7 67 3.9E-31 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Patl_3978 ad3fe80020195aa3bad35112a6ad03e5 83 Gene3D G3DSA:2.30.30.100 1 69 6.8E-33 T 11-10-2018 Patl_3978 ad3fe80020195aa3bad35112a6ad03e5 83 SUPERFAMILY SSF50182 7 68 2.62E-24 T 11-10-2018 IPR010920 LSM domain superfamily Patl_3978 ad3fe80020195aa3bad35112a6ad03e5 83 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 3.6E-30 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Patl_3978 ad3fe80020195aa3bad35112a6ad03e5 83 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.752 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Patl_2963 738859fb4409f0edf819fc0d665a2268 669 SUPERFAMILY SSF46600 619 666 6.67E-11 T 11-10-2018 IPR036876 UVR domain superfamily Patl_2963 738859fb4409f0edf819fc0d665a2268 669 Pfam PF12344 Ultra-violet resistance protein B 552 593 6.3E-21 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Patl_2963 738859fb4409f0edf819fc0d665a2268 669 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 664 43.161 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Patl_2963 738859fb4409f0edf819fc0d665a2268 669 Pfam PF00271 Helicase conserved C-terminal domain 439 544 6.4E-17 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_2963 738859fb4409f0edf819fc0d665a2268 669 Pfam PF02151 UvrB/uvrC motif 630 663 3.0E-8 T 11-10-2018 IPR001943 UVR domain GO:0005515 Patl_2963 738859fb4409f0edf819fc0d665a2268 669 SMART SM00490 460 546 4.0E-19 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_2963 738859fb4409f0edf819fc0d665a2268 669 SMART SM00487 9 426 1.1E-23 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_2963 738859fb4409f0edf819fc0d665a2268 669 Gene3D G3DSA:3.40.50.300 259 414 1.3E-51 T 11-10-2018 Patl_2963 738859fb4409f0edf819fc0d665a2268 669 SUPERFAMILY SSF52540 37 584 9.55E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2963 738859fb4409f0edf819fc0d665a2268 669 Pfam PF04851 Type III restriction enzyme, res subunit 16 138 8.6E-9 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Patl_2963 738859fb4409f0edf819fc0d665a2268 669 Gene3D G3DSA:4.10.860.10 614 669 5.2E-13 T 11-10-2018 Patl_2963 738859fb4409f0edf819fc0d665a2268 669 Gene3D G3DSA:3.40.50.300 1 244 1.3E-77 T 11-10-2018 Patl_2963 738859fb4409f0edf819fc0d665a2268 669 SUPERFAMILY SSF52540 5 415 1.61E-135 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2963 738859fb4409f0edf819fc0d665a2268 669 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 662 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Patl_2963 738859fb4409f0edf819fc0d665a2268 669 Gene3D G3DSA:3.40.50.300 415 596 9.9E-50 T 11-10-2018 Patl_1008 860f53ca22e68c3a2acf132cdd553cbc 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 143 3.0E-48 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1008 860f53ca22e68c3a2acf132cdd553cbc 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.0E-31 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P Patl_1008 860f53ca22e68c3a2acf132cdd553cbc 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 20.224 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Patl_1008 860f53ca22e68c3a2acf132cdd553cbc 144 SUPERFAMILY SSF52080 4 143 1.2E-47 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Patl_1008 860f53ca22e68c3a2acf132cdd553cbc 144 Gene3D G3DSA:3.100.10.10 71 144 4.2E-16 T 11-10-2018 Patl_0884 09871ebb499f75b1e5d81acbc9e8114a 259 Gene3D G3DSA:2.60.120.560 15 259 4.5E-40 T 11-10-2018 Patl_0884 09871ebb499f75b1e5d81acbc9e8114a 259 Pfam PF06439 Domain of Unknown Function (DUF1080) 28 257 3.7E-39 T 11-10-2018 IPR010496 Domain of unknown function DUF1080 Patl_2036 2741a20f862cceb903611c5bcba8fd26 398 Gene3D G3DSA:3.40.50.970 9 394 1.9E-138 T 11-10-2018 Patl_2036 2741a20f862cceb903611c5bcba8fd26 398 Pfam PF00676 Dehydrogenase E1 component 58 350 1.1E-95 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Patl_2036 2741a20f862cceb903611c5bcba8fd26 398 SUPERFAMILY SSF52518 21 379 9.77E-109 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Patl_2561 d7ca99b12a6f2fe630efbb4bc5017974 517 Pfam PF00072 Response regulator receiver domain 24 134 9.2E-8 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2561 d7ca99b12a6f2fe630efbb4bc5017974 517 Gene3D G3DSA:3.40.50.2300 11 160 3.4E-14 T 11-10-2018 Patl_2561 d7ca99b12a6f2fe630efbb4bc5017974 517 SMART SM00448 22 144 0.0033 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2561 d7ca99b12a6f2fe630efbb4bc5017974 517 Gene3D G3DSA:1.10.3210.10 317 515 2.3E-41 T 11-10-2018 Patl_2561 d7ca99b12a6f2fe630efbb4bc5017974 517 SUPERFAMILY SSF109604 344 505 2.64E-16 T 11-10-2018 Patl_2561 d7ca99b12a6f2fe630efbb4bc5017974 517 Pfam PF11849 Domain of unknown function (DUF3369) 144 321 4.5E-51 T 11-10-2018 IPR021800 Domain of unknown function DUF3369 Patl_2561 d7ca99b12a6f2fe630efbb4bc5017974 517 SUPERFAMILY SSF52172 19 154 1.07E-13 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2561 d7ca99b12a6f2fe630efbb4bc5017974 517 Pfam PF13487 HD domain 394 456 4.4E-13 T 11-10-2018 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 Gene3D G3DSA:3.30.1480.10 1 132 5.8E-38 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 Pfam PF00575 S1 RNA binding domain 136 195 3.9E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 Pfam PF08529 NusA N-terminal domain 4 126 5.2E-31 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 Gene3D G3DSA:1.10.150.20 434 493 1.8E-20 T 11-10-2018 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 SUPERFAMILY SSF47794 357 419 6.12E-17 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 SUPERFAMILY SSF50249 135 202 2.07E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_1694 92b979381418c39b32597bbd91ab50a3 497 Gene3D G3DSA:3.30.300.20 281 348 3.7E-25 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Patl_1694 92b979381418c39b32597bbd91ab50a3 497 SMART SM00322 304 382 0.032 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 SMART SM00322 233 296 21.0 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 413 28.507 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 Pfam PF13184 NusA-like KH domain 233 300 4.8E-28 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 Pfam PF14520 Helix-hairpin-helix domain 435 489 6.0E-8 T 11-10-2018 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 SUPERFAMILY SSF54814 282 346 2.03E-15 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 345 2.5E-123 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 Gene3D G3DSA:2.40.50.140 138 201 3.8E-18 T 11-10-2018 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 SUPERFAMILY SSF47794 432 495 2.51E-15 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 Gene3D G3DSA:3.30.300.20 202 280 3.6E-31 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Patl_1694 92b979381418c39b32597bbd91ab50a3 497 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 443 491 1.8E-14 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication Patl_1694 92b979381418c39b32597bbd91ab50a3 497 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 368 417 1.2E-21 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication Patl_1694 92b979381418c39b32597bbd91ab50a3 497 Gene3D G3DSA:1.10.150.20 357 424 1.8E-26 T 11-10-2018 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 SUPERFAMILY SSF69705 1 129 5.36E-36 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 SMART SM00316 136 203 3.9E-10 T 11-10-2018 IPR022967 RNA-binding domain, S1 Patl_1694 92b979381418c39b32597bbd91ab50a3 497 SUPERFAMILY SSF54814 203 281 1.9E-29 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Patl_2738 b07349025261d8bd1791d90c41b378ca 184 Gene3D G3DSA:3.40.630.30 2 153 1.9E-28 T 11-10-2018 Patl_2738 b07349025261d8bd1791d90c41b378ca 184 SUPERFAMILY SSF55729 15 142 7.09E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_2738 b07349025261d8bd1791d90c41b378ca 184 Pfam PF13508 Acetyltransferase (GNAT) domain 52 132 4.0E-8 T 11-10-2018 IPR000182 GNAT domain Patl_0970 d7fac0647da172847fe9e128291a34cd 496 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 490 85.938 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Patl_0970 d7fac0647da172847fe9e128291a34cd 496 PIRSF PIRSF000110 1 492 5.3E-174 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Patl_0970 d7fac0647da172847fe9e128291a34cd 496 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 1.8E-115 T 11-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Patl_0970 d7fac0647da172847fe9e128291a34cd 496 Gene3D G3DSA:3.40.50.720 12 438 4.1E-166 T 11-10-2018 Patl_0970 d7fac0647da172847fe9e128291a34cd 496 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 175 181 - T 11-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Patl_0970 d7fac0647da172847fe9e128291a34cd 496 Gene3D G3DSA:3.30.360.10 175 477 4.1E-166 T 11-10-2018 Patl_0970 d7fac0647da172847fe9e128291a34cd 496 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 235 251 4.8E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Patl_0970 d7fac0647da172847fe9e128291a34cd 496 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 217 234 4.8E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Patl_0970 d7fac0647da172847fe9e128291a34cd 496 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 141 154 4.8E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Patl_0970 d7fac0647da172847fe9e128291a34cd 496 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 326 352 4.8E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Patl_0970 d7fac0647da172847fe9e128291a34cd 496 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 165 193 4.8E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Patl_0970 d7fac0647da172847fe9e128291a34cd 496 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 490 1.1E-184 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Patl_0970 d7fac0647da172847fe9e128291a34cd 496 SUPERFAMILY SSF51735 7 188 3.35E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0970 d7fac0647da172847fe9e128291a34cd 496 SUPERFAMILY SSF55347 175 489 8.83E-113 T 11-10-2018 Patl_0970 d7fac0647da172847fe9e128291a34cd 496 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 185 8.9E-56 T 11-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Patl_1641 89697c8152573b474d4e23948da5fa12 375 Gene3D G3DSA:3.40.630.10 113 375 2.1E-70 T 11-10-2018 Patl_1641 89697c8152573b474d4e23948da5fa12 375 Gene3D G3DSA:2.60.40.3120 1 112 9.7E-42 T 11-10-2018 Patl_1641 89697c8152573b474d4e23948da5fa12 375 Pfam PF00246 Zinc carboxypeptidase 132 341 1.7E-24 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Patl_1641 89697c8152573b474d4e23948da5fa12 375 SUPERFAMILY SSF53187 102 369 8.93E-60 T 11-10-2018 Patl_1641 89697c8152573b474d4e23948da5fa12 375 SMART SM00631 114 373 8.9E-4 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Patl_1284 29e72e14fad878f3c6076a7715687731 907 ProSitePatterns PS01244 Aconitase family signature 2. 510 523 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Patl_1284 29e72e14fad878f3c6076a7715687731 907 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 17 902 0.0 T 11-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 Patl_1284 29e72e14fad878f3c6076a7715687731 907 Gene3D G3DSA:3.20.19.10 670 905 8.1E-105 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Patl_1284 29e72e14fad878f3c6076a7715687731 907 Gene3D G3DSA:3.30.499.10 371 607 2.4E-101 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Patl_1284 29e72e14fad878f3c6076a7715687731 907 PRINTS PR00415 Aconitase family signature 370 384 7.4E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1284 29e72e14fad878f3c6076a7715687731 907 PRINTS PR00415 Aconitase family signature 214 229 7.4E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1284 29e72e14fad878f3c6076a7715687731 907 PRINTS PR00415 Aconitase family signature 290 303 7.4E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1284 29e72e14fad878f3c6076a7715687731 907 PRINTS PR00415 Aconitase family signature 200 213 7.4E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1284 29e72e14fad878f3c6076a7715687731 907 PRINTS PR00415 Aconitase family signature 167 175 7.4E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1284 29e72e14fad878f3c6076a7715687731 907 PRINTS PR00415 Aconitase family signature 276 289 7.4E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1284 29e72e14fad878f3c6076a7715687731 907 PRINTS PR00415 Aconitase family signature 510 523 7.4E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1284 29e72e14fad878f3c6076a7715687731 907 PRINTS PR00415 Aconitase family signature 143 156 7.4E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1284 29e72e14fad878f3c6076a7715687731 907 PRINTS PR00415 Aconitase family signature 448 459 7.4E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1284 29e72e14fad878f3c6076a7715687731 907 Gene3D G3DSA:3.30.499.20 4 370 4.3E-160 T 11-10-2018 Patl_1284 29e72e14fad878f3c6076a7715687731 907 ProSitePatterns PS00450 Aconitase family signature 1. 444 460 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Patl_1284 29e72e14fad878f3c6076a7715687731 907 Pfam PF00694 Aconitase C-terminal domain 707 835 4.7E-48 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Patl_1284 29e72e14fad878f3c6076a7715687731 907 SUPERFAMILY SSF53732 7 643 1.96E-222 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Patl_1284 29e72e14fad878f3c6076a7715687731 907 Gene3D G3DSA:1.10.1440.20 608 667 2.6E-17 T 11-10-2018 Patl_1284 29e72e14fad878f3c6076a7715687731 907 Pfam PF00330 Aconitase family (aconitate hydratase) 66 579 6.6E-182 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1284 29e72e14fad878f3c6076a7715687731 907 SUPERFAMILY SSF52016 652 902 4.91E-80 T 11-10-2018 Patl_1608 b85f14d8314efd423ef14f40d9fe1269 162 Pfam PF02674 Colicin V production protein 4 141 4.4E-37 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 Patl_1758 bdb24c8cd9653e133fb05b5414633b0c 737 Gene3D G3DSA:3.40.50.300 197 446 2.4E-62 T 11-10-2018 Patl_1758 bdb24c8cd9653e133fb05b5414633b0c 737 SUPERFAMILY SSF52540 264 715 2.2E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1758 bdb24c8cd9653e133fb05b5414633b0c 737 Pfam PF13604 AAA domain 266 429 4.4E-31 T 11-10-2018 Patl_1758 bdb24c8cd9653e133fb05b5414633b0c 737 Pfam PF13538 UvrD-like helicase C-terminal domain 660 710 2.9E-16 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain Patl_1758 bdb24c8cd9653e133fb05b5414633b0c 737 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 142 735 1.1E-155 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 Patl_1758 bdb24c8cd9653e133fb05b5414633b0c 737 Gene3D G3DSA:3.40.50.300 601 724 3.4E-26 T 11-10-2018 Patl_1758 bdb24c8cd9653e133fb05b5414633b0c 737 Gene3D G3DSA:3.40.50.300 486 600 3.4E-15 T 11-10-2018 Patl_1758 bdb24c8cd9653e133fb05b5414633b0c 737 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 43 733 53.914 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 Patl_1676 04f80e9b01cfab6cfd6602013800e203 231 Pfam PF02678 Pirin 10 119 1.4E-31 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Patl_1676 04f80e9b01cfab6cfd6602013800e203 231 SUPERFAMILY SSF51182 1 230 2.82E-69 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_1676 04f80e9b01cfab6cfd6602013800e203 231 Gene3D G3DSA:2.60.120.10 8 231 1.8E-81 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_1676 04f80e9b01cfab6cfd6602013800e203 231 Gene3D G3DSA:2.60.120.10 11 135 1.8E-81 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_1676 04f80e9b01cfab6cfd6602013800e203 231 PIRSF PIRSF006232 1 229 6.8E-50 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Patl_2082 c4816a2dbb2a04c576db93969993143c 714 SUPERFAMILY SSF55874 274 445 1.27E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2082 c4816a2dbb2a04c576db93969993143c 714 SMART SM00388 220 285 6.5E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2082 c4816a2dbb2a04c576db93969993143c 714 Gene3D G3DSA:3.40.50.2300 461 594 3.6E-15 T 11-10-2018 Patl_2082 c4816a2dbb2a04c576db93969993143c 714 SMART SM00387 332 447 5.8E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2082 c4816a2dbb2a04c576db93969993143c 714 SMART SM00448 595 706 1.8E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2082 c4816a2dbb2a04c576db93969993143c 714 SMART SM00448 464 578 1.6E-6 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2082 c4816a2dbb2a04c576db93969993143c 714 SUPERFAMILY SSF47384 218 284 2.55E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_2082 c4816a2dbb2a04c576db93969993143c 714 SUPERFAMILY SSF52172 593 711 7.54E-35 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2082 c4816a2dbb2a04c576db93969993143c 714 SUPERFAMILY SSF52172 464 586 1.01E-16 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2082 c4816a2dbb2a04c576db93969993143c 714 Gene3D G3DSA:1.10.287.130 194 283 1.2E-17 T 11-10-2018 Patl_2082 c4816a2dbb2a04c576db93969993143c 714 Pfam PF00512 His Kinase A (phospho-acceptor) domain 221 284 3.1E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2082 c4816a2dbb2a04c576db93969993143c 714 Gene3D G3DSA:3.40.50.2300 595 714 3.0E-34 T 11-10-2018 Patl_2082 c4816a2dbb2a04c576db93969993143c 714 Gene3D G3DSA:3.30.565.10 286 451 6.6E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2082 c4816a2dbb2a04c576db93969993143c 714 Pfam PF00072 Response regulator receiver domain 468 578 5.9E-10 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2082 c4816a2dbb2a04c576db93969993143c 714 Pfam PF00072 Response regulator receiver domain 597 706 1.4E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2082 c4816a2dbb2a04c576db93969993143c 714 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 3.1E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2082 c4816a2dbb2a04c576db93969993143c 714 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 3.1E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2082 c4816a2dbb2a04c576db93969993143c 714 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 3.1E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2082 c4816a2dbb2a04c576db93969993143c 714 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 3.1E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2082 c4816a2dbb2a04c576db93969993143c 714 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 446 3.1E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2668 969b29274de606787974f9b2aca1a5ae 537 SUPERFAMILY SSF47917 361 472 1.23E-43 T 11-10-2018 Patl_2668 969b29274de606787974f9b2aca1a5ae 537 Gene3D G3DSA:1.10.1140.10 361 479 2.3E-46 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_2668 969b29274de606787974f9b2aca1a5ae 537 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 144 357 4.4E-64 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_2668 969b29274de606787974f9b2aca1a5ae 537 Gene3D G3DSA:3.40.50.300 90 359 6.2E-100 T 11-10-2018 Patl_2668 969b29274de606787974f9b2aca1a5ae 537 SUPERFAMILY SSF52540 91 361 1.83E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2668 969b29274de606787974f9b2aca1a5ae 537 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_2668 969b29274de606787974f9b2aca1a5ae 537 SMART SM00382 156 341 1.1E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2668 969b29274de606787974f9b2aca1a5ae 537 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 20 470 3.7E-190 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Patl_2668 969b29274de606787974f9b2aca1a5ae 537 SUPERFAMILY SSF50615 16 89 8.63E-17 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_2668 969b29274de606787974f9b2aca1a5ae 537 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 24 87 1.7E-10 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_2668 969b29274de606787974f9b2aca1a5ae 537 TIGRFAM TIGR03305 alt_F1F0_F1_bet: alternate F1F0 ATPase, F1 subunit beta 21 468 5.0E-272 T 11-10-2018 IPR017691 ATP synthase subunit beta, bacterial and archaeal GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_2668 969b29274de606787974f9b2aca1a5ae 537 Gene3D G3DSA:2.40.10.170 8 89 2.2E-19 T 11-10-2018 Patl_2668 969b29274de606787974f9b2aca1a5ae 537 Hamap MF_01347 ATP synthase subunit beta [atpB]. 18 475 48.904 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Patl_3929 67ff5fa78923588cb9b436ea7912f5ba 225 SUPERFAMILY SSF53335 48 216 1.98E-15 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3929 67ff5fa78923588cb9b436ea7912f5ba 225 Gene3D G3DSA:3.40.50.150 29 225 7.4E-31 T 11-10-2018 Patl_3929 67ff5fa78923588cb9b436ea7912f5ba 225 Pfam PF02390 Putative methyltransferase 62 219 2.1E-14 T 11-10-2018 Patl_0952 f1a8e8de16d6d0fca09b234a0796c861 253 Gene3D G3DSA:3.40.50.720 1 253 4.9E-73 T 11-10-2018 Patl_0952 f1a8e8de16d6d0fca09b234a0796c861 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 2.3E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0952 f1a8e8de16d6d0fca09b234a0796c861 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.3E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0952 f1a8e8de16d6d0fca09b234a0796c861 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 2.3E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0952 f1a8e8de16d6d0fca09b234a0796c861 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 251 1.6E-52 T 11-10-2018 Patl_0952 f1a8e8de16d6d0fca09b234a0796c861 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_0952 f1a8e8de16d6d0fca09b234a0796c861 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 3.1E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0952 f1a8e8de16d6d0fca09b234a0796c861 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 3.1E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0952 f1a8e8de16d6d0fca09b234a0796c861 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.1E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0952 f1a8e8de16d6d0fca09b234a0796c861 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 3.1E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0952 f1a8e8de16d6d0fca09b234a0796c861 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.1E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0952 f1a8e8de16d6d0fca09b234a0796c861 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 3.1E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0952 f1a8e8de16d6d0fca09b234a0796c861 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 194 9.5E-6 T 11-10-2018 Patl_0952 f1a8e8de16d6d0fca09b234a0796c861 253 SUPERFAMILY SSF51735 1 252 1.53E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2321 cef1b3882a75e11ded5548f0f6905d97 303 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 181 278 1.5E-21 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Patl_2321 cef1b3882a75e11ded5548f0f6905d97 303 Gene3D G3DSA:3.40.50.720 5 182 2.5E-57 T 11-10-2018 Patl_2321 cef1b3882a75e11ded5548f0f6905d97 303 PIRSF PIRSF000105 2 302 1.5E-80 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 Patl_2321 cef1b3882a75e11ded5548f0f6905d97 303 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 178 1.6E-51 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Patl_2321 cef1b3882a75e11ded5548f0f6905d97 303 Gene3D G3DSA:1.10.1040.10 183 302 1.7E-34 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Patl_2321 cef1b3882a75e11ded5548f0f6905d97 303 SUPERFAMILY SSF48179 180 287 2.38E-21 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_2321 cef1b3882a75e11ded5548f0f6905d97 303 SUPERFAMILY SSF51735 2 177 9.69E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3669 7eafa50c959748f6256b60b5376a631f 300 SUPERFAMILY SSF55073 142 297 1.49E-44 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3669 7eafa50c959748f6256b60b5376a631f 300 Pfam PF00990 Diguanylate cyclase, GGDEF domain 137 296 9.3E-44 T 11-10-2018 IPR000160 GGDEF domain Patl_3669 7eafa50c959748f6256b60b5376a631f 300 SMART SM00448 8 120 1.6E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3669 7eafa50c959748f6256b60b5376a631f 300 SMART SM00267 126 300 2.2E-65 T 11-10-2018 IPR000160 GGDEF domain Patl_3669 7eafa50c959748f6256b60b5376a631f 300 Gene3D G3DSA:3.30.70.270 135 300 1.0E-51 T 11-10-2018 Patl_3669 7eafa50c959748f6256b60b5376a631f 300 Gene3D G3DSA:3.40.50.2300 2 134 1.1E-38 T 11-10-2018 Patl_3669 7eafa50c959748f6256b60b5376a631f 300 Pfam PF00072 Response regulator receiver domain 10 120 2.1E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3669 7eafa50c959748f6256b60b5376a631f 300 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 133 297 5.0E-49 T 11-10-2018 IPR000160 GGDEF domain Patl_3669 7eafa50c959748f6256b60b5376a631f 300 SUPERFAMILY SSF52172 7 164 6.69E-41 T 11-10-2018 IPR011006 CheY-like superfamily Patl_0067 a6196d1f421034c5c2db9d2608b5d335 273 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 272 27.447 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Patl_0067 a6196d1f421034c5c2db9d2608b5d335 273 Pfam PF01040 UbiA prenyltransferase family 12 254 6.1E-63 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Patl_0067 a6196d1f421034c5c2db9d2608b5d335 273 Gene3D G3DSA:1.10.357.140 7 153 9.8E-41 T 11-10-2018 Patl_0067 a6196d1f421034c5c2db9d2608b5d335 273 Gene3D G3DSA:1.20.120.1780 154 272 7.0E-11 T 11-10-2018 Patl_0067 a6196d1f421034c5c2db9d2608b5d335 273 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 1 271 5.3E-100 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 Patl_0333 98421c0975aec394968ba95d1cf482a6 431 Gene3D G3DSA:1.50.10.10 13 430 1.1E-111 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Patl_0333 98421c0975aec394968ba95d1cf482a6 431 SUPERFAMILY SSF48208 24 430 3.57E-64 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Patl_0333 98421c0975aec394968ba95d1cf482a6 431 Pfam PF01204 Trehalase 109 390 3.6E-8 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 Patl_0584 2db60cb7d91d3667ad05c55a4de2b827 344 SUPERFAMILY SSF51556 1 342 2.81E-143 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_0584 2db60cb7d91d3667ad05c55a4de2b827 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_0584 2db60cb7d91d3667ad05c55a4de2b827 344 PIRSF PIRSF001237 1 344 1.0E-141 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_0584 2db60cb7d91d3667ad05c55a4de2b827 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_0584 2db60cb7d91d3667ad05c55a4de2b827 344 Hamap MF_00219 Dihydroorotase [pyrC]. 2 343 46.237 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_0584 2db60cb7d91d3667ad05c55a4de2b827 344 Gene3D G3DSA:3.20.20.140 2 344 1.4E-108 T 11-10-2018 Patl_0584 2db60cb7d91d3667ad05c55a4de2b827 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 3 343 8.9E-136 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_0584 2db60cb7d91d3667ad05c55a4de2b827 344 Pfam PF01979 Amidohydrolase family 11 304 7.4E-15 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Patl_0122 387b714e5e7fd6883719bfe0c9c635f8 964 Gene3D G3DSA:2.170.130.10 41 173 1.6E-16 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_0122 387b714e5e7fd6883719bfe0c9c635f8 964 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 170 3.0E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0122 387b714e5e7fd6883719bfe0c9c635f8 964 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 48 964 2.0E-191 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor Patl_0122 387b714e5e7fd6883719bfe0c9c635f8 964 SUPERFAMILY SSF56935 41 964 2.09E-82 T 11-10-2018 Patl_0122 387b714e5e7fd6883719bfe0c9c635f8 964 Pfam PF00593 TonB dependent receptor 422 963 1.1E-37 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3200 d8404d63565742c17708393a520d9c59 446 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 423 1.1E-29 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Patl_3200 d8404d63565742c17708393a520d9c59 446 Gene3D G3DSA:3.40.50.720 235 445 1.9E-76 T 11-10-2018 Patl_3200 d8404d63565742c17708393a520d9c59 446 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 295 1.9E-38 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Patl_3200 d8404d63565742c17708393a520d9c59 446 SUPERFAMILY SSF52413 307 435 9.68E-40 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Patl_3200 d8404d63565742c17708393a520d9c59 446 PIRSF PIRSF500134 1 442 2.1E-190 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 Patl_3200 d8404d63565742c17708393a520d9c59 446 SUPERFAMILY SSF48179 203 301 7.82E-34 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_3200 d8404d63565742c17708393a520d9c59 446 Gene3D G3DSA:1.20.5.100 203 233 1.1E-17 T 11-10-2018 Patl_3200 d8404d63565742c17708393a520d9c59 446 Gene3D G3DSA:3.40.50.720 1 202 4.8E-81 T 11-10-2018 Patl_3200 d8404d63565742c17708393a520d9c59 446 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 420 2.5E-146 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Patl_3200 d8404d63565742c17708393a520d9c59 446 SMART SM00984 320 424 1.4E-48 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Patl_3200 d8404d63565742c17708393a520d9c59 446 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 187 2.0E-70 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Patl_3200 d8404d63565742c17708393a520d9c59 446 PIRSF PIRSF000124 1 439 3.4E-150 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Patl_3200 d8404d63565742c17708393a520d9c59 446 SUPERFAMILY SSF51735 1 195 4.51E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3456 53343825691b117b86ff86e89ebed823 597 Gene3D G3DSA:3.40.50.300 188 381 5.9E-32 T 11-10-2018 Patl_3456 53343825691b117b86ff86e89ebed823 597 Gene3D G3DSA:3.40.50.300 1 170 1.8E-27 T 11-10-2018 Patl_3456 53343825691b117b86ff86e89ebed823 597 Pfam PF00271 Helicase conserved C-terminal domain 248 347 2.0E-13 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_3456 53343825691b117b86ff86e89ebed823 597 SMART SM00487 3 187 3.9E-10 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_3456 53343825691b117b86ff86e89ebed823 597 SUPERFAMILY SSF57829 434 479 4.03E-6 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Patl_3456 53343825691b117b86ff86e89ebed823 597 SUPERFAMILY SSF52540 51 363 1.96E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3456 53343825691b117b86ff86e89ebed823 597 Pfam PF04851 Type III restriction enzyme, res subunit 6 157 3.6E-21 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Patl_3456 53343825691b117b86ff86e89ebed823 597 SMART SM00490 267 349 3.3E-10 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_1237 c7bda93e061924b6d6c4dbb4636a86ea 161 SUPERFAMILY SSF46785 2 133 2.92E-35 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1237 c7bda93e061924b6d6c4dbb4636a86ea 161 Pfam PF02082 Transcriptional regulator 1 83 3.4E-28 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type Patl_1237 c7bda93e061924b6d6c4dbb4636a86ea 161 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 7.2E-65 T 11-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 Patl_1237 c7bda93e061924b6d6c4dbb4636a86ea 161 Gene3D G3DSA:1.10.10.10 1 144 1.5E-54 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1237 c7bda93e061924b6d6c4dbb4636a86ea 161 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 1.3E-46 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type Patl_2133 42e0151f4dfc234e5d0c60364717fbbf 318 SUPERFAMILY SSF55174 21 72 2.35E-8 T 11-10-2018 Patl_2133 42e0151f4dfc234e5d0c60364717fbbf 318 Pfam PF00849 RNA pseudouridylate synthase 103 250 1.6E-33 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_2133 42e0151f4dfc234e5d0c60364717fbbf 318 Gene3D G3DSA:3.30.2350.10 94 316 3.7E-83 T 11-10-2018 Patl_2133 42e0151f4dfc234e5d0c60364717fbbf 318 SUPERFAMILY SSF55120 96 315 7.36E-68 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_2133 42e0151f4dfc234e5d0c60364717fbbf 318 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_2133 42e0151f4dfc234e5d0c60364717fbbf 318 SMART SM00363 22 82 2.9E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_2133 42e0151f4dfc234e5d0c60364717fbbf 318 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 314 3.1E-91 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_2133 42e0151f4dfc234e5d0c60364717fbbf 318 Pfam PF01479 S4 domain 22 67 6.2E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_2133 42e0151f4dfc234e5d0c60364717fbbf 318 Gene3D G3DSA:3.10.290.10 10 74 1.6E-14 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Patl_0981 835661f47681029c75422bbf8b6b6915 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 229 5.5E-59 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Patl_0981 835661f47681029c75422bbf8b6b6915 257 Pfam PF00696 Amino acid kinase family 4 233 3.0E-37 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Patl_0981 835661f47681029c75422bbf8b6b6915 257 SUPERFAMILY SSF53633 2 255 4.58E-57 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Patl_0981 835661f47681029c75422bbf8b6b6915 257 PIRSF PIRSF000728 1 256 6.0E-65 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Patl_0981 835661f47681029c75422bbf8b6b6915 257 Gene3D G3DSA:3.40.1160.10 1 254 3.8E-64 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Patl_0981 835661f47681029c75422bbf8b6b6915 257 Hamap MF_00082 Acetylglutamate kinase [argB]. 1 248 41.939 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Patl_1251 c871cd006f870add794c9184b1982f22 247 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 3.1E-102 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Patl_1251 c871cd006f870add794c9184b1982f22 247 Gene3D G3DSA:3.40.1160.10 4 244 3.0E-77 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Patl_1251 c871cd006f870add794c9184b1982f22 247 PIRSF PIRSF005650 4 247 1.7E-90 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Patl_1251 c871cd006f870add794c9184b1982f22 247 Pfam PF00696 Amino acid kinase family 11 219 2.0E-29 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Patl_1251 c871cd006f870add794c9184b1982f22 247 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.011 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Patl_1251 c871cd006f870add794c9184b1982f22 247 SUPERFAMILY SSF53633 8 239 4.58E-73 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Patl_0834 ae9069ae6e032771b7d8d9bcfc4886fe 492 SUPERFAMILY SSF51735 17 286 1.54E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0834 ae9069ae6e032771b7d8d9bcfc4886fe 492 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 221 455 1.2E-62 T 11-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 Patl_0834 ae9069ae6e032771b7d8d9bcfc4886fe 492 Gene3D G3DSA:3.40.50.720 5 286 9.4E-92 T 11-10-2018 Patl_0834 ae9069ae6e032771b7d8d9bcfc4886fe 492 SUPERFAMILY SSF48179 288 479 5.1E-46 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_0834 ae9069ae6e032771b7d8d9bcfc4886fe 492 PRINTS PR00084 Mannitol dehydrogenase signature 36 46 1.1E-13 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Patl_0834 ae9069ae6e032771b7d8d9bcfc4886fe 492 PRINTS PR00084 Mannitol dehydrogenase signature 223 236 1.1E-13 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Patl_0834 ae9069ae6e032771b7d8d9bcfc4886fe 492 PRINTS PR00084 Mannitol dehydrogenase signature 184 197 1.1E-13 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Patl_0834 ae9069ae6e032771b7d8d9bcfc4886fe 492 PRINTS PR00084 Mannitol dehydrogenase signature 253 268 1.1E-13 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Patl_0834 ae9069ae6e032771b7d8d9bcfc4886fe 492 Gene3D G3DSA:1.10.1040.10 287 484 5.1E-57 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Patl_0834 ae9069ae6e032771b7d8d9bcfc4886fe 492 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 35 193 3.1E-35 T 11-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_0514 5cf2792ab77afed0751e963395d97a6e 399 Gene3D G3DSA:1.10.240.10 218 326 2.8E-34 T 11-10-2018 Patl_0514 5cf2792ab77afed0751e963395d97a6e 399 SUPERFAMILY SSF55174 320 398 8.05E-17 T 11-10-2018 Patl_0514 5cf2792ab77afed0751e963395d97a6e 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 10 397 3.2E-127 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Patl_0514 5cf2792ab77afed0751e963395d97a6e 399 SMART SM00363 337 399 0.0085 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0514 5cf2792ab77afed0751e963395d97a6e 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_0514 5cf2792ab77afed0751e963395d97a6e 399 Gene3D G3DSA:3.40.50.620 5 217 2.1E-72 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_0514 5cf2792ab77afed0751e963395d97a6e 399 SUPERFAMILY SSF52374 11 315 1.53E-97 T 11-10-2018 Patl_0514 5cf2792ab77afed0751e963395d97a6e 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 398 48.647 T 11-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 Patl_0514 5cf2792ab77afed0751e963395d97a6e 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.5E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Patl_0514 5cf2792ab77afed0751e963395d97a6e 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.5E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Patl_0514 5cf2792ab77afed0751e963395d97a6e 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.5E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Patl_0514 5cf2792ab77afed0751e963395d97a6e 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.5E-24 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Patl_0514 5cf2792ab77afed0751e963395d97a6e 399 Gene3D G3DSA:3.10.290.10 327 398 1.0E-18 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Patl_0514 5cf2792ab77afed0751e963395d97a6e 399 Pfam PF00579 tRNA synthetases class I (W and Y) 31 317 3.2E-79 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_3419 ef00b0d04c38e4c6c3b764d46bf18ea6 431 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 320 341 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 Patl_3419 ef00b0d04c38e4c6c3b764d46bf18ea6 431 Hamap MF_01183 Chaperone SurA [surA]. 1 427 34.545 T 11-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 Patl_3419 ef00b0d04c38e4c6c3b764d46bf18ea6 431 SUPERFAMILY SSF54534 173 275 1.44E-25 T 11-10-2018 Patl_3419 ef00b0d04c38e4c6c3b764d46bf18ea6 431 Gene3D G3DSA:1.10.4030.30 26 276 1.0E-67 T 11-10-2018 Patl_3419 ef00b0d04c38e4c6c3b764d46bf18ea6 431 Gene3D G3DSA:3.10.50.40 172 274 1.0E-67 T 11-10-2018 Patl_3419 ef00b0d04c38e4c6c3b764d46bf18ea6 431 SUPERFAMILY SSF54534 283 383 1.5E-30 T 11-10-2018 Patl_3419 ef00b0d04c38e4c6c3b764d46bf18ea6 431 Gene3D G3DSA:1.10.4030.30 381 427 1.5E-6 T 11-10-2018 Patl_3419 ef00b0d04c38e4c6c3b764d46bf18ea6 431 Pfam PF09312 SurA N-terminal domain 25 142 9.1E-37 T 11-10-2018 IPR015391 SurA N-terminal Patl_3419 ef00b0d04c38e4c6c3b764d46bf18ea6 431 Gene3D G3DSA:3.10.50.40 281 380 7.1E-34 T 11-10-2018 Patl_3419 ef00b0d04c38e4c6c3b764d46bf18ea6 431 SUPERFAMILY SSF109998 25 202 1.96E-37 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily Patl_3419 ef00b0d04c38e4c6c3b764d46bf18ea6 431 Pfam PF00639 PPIC-type PPIASE domain 288 381 4.1E-24 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Patl_3419 ef00b0d04c38e4c6c3b764d46bf18ea6 431 Pfam PF00639 PPIC-type PPIASE domain 178 271 3.6E-19 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Patl_4148 3a7121650e5b4ad39eb534fb41b5038a 181 SUPERFAMILY SSF46785 7 146 1.16E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_4148 3a7121650e5b4ad39eb534fb41b5038a 181 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Patl_4148 3a7121650e5b4ad39eb534fb41b5038a 181 Pfam PF01047 MarR family 38 96 1.7E-14 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_4148 3a7121650e5b4ad39eb534fb41b5038a 181 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 1.0E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_4148 3a7121650e5b4ad39eb534fb41b5038a 181 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 1.0E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_4148 3a7121650e5b4ad39eb534fb41b5038a 181 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 1.0E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_4148 3a7121650e5b4ad39eb534fb41b5038a 181 Gene3D G3DSA:1.10.10.10 5 147 1.9E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_4148 3a7121650e5b4ad39eb534fb41b5038a 181 SMART SM00347 31 131 1.5E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_1255 4f887a845983d0d1b99ec501d8fce8de 397 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 1.5E-43 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Patl_1255 4f887a845983d0d1b99ec501d8fce8de 397 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 388 44.527 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Patl_1255 4f887a845983d0d1b99ec501d8fce8de 397 SUPERFAMILY SSF51735 2 150 3.01E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1255 4f887a845983d0d1b99ec501d8fce8de 397 SUPERFAMILY SSF55347 126 270 8.5E-61 T 11-10-2018 Patl_1255 4f887a845983d0d1b99ec501d8fce8de 397 Gene3D G3DSA:3.40.50.720 1 150 1.2E-52 T 11-10-2018 Patl_1255 4f887a845983d0d1b99ec501d8fce8de 397 SUPERFAMILY SSF69055 298 391 3.14E-27 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Patl_1255 4f887a845983d0d1b99ec501d8fce8de 397 PIRSF PIRSF006205 1 395 2.9E-149 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Patl_1255 4f887a845983d0d1b99ec501d8fce8de 397 Gene3D G3DSA:1.10.1740.10 309 393 2.1E-25 T 11-10-2018 Patl_1255 4f887a845983d0d1b99ec501d8fce8de 397 Pfam PF13288 DXP reductoisomerase C-terminal domain 267 383 2.8E-36 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Patl_1255 4f887a845983d0d1b99ec501d8fce8de 397 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 235 1.8E-37 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Patl_1255 4f887a845983d0d1b99ec501d8fce8de 397 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 387 9.3E-156 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SUPERFAMILY SSF48452 476 715 2.97E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Gene3D G3DSA:1.25.40.10 689 843 1.1E-43 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SUPERFAMILY SSF48452 59 255 6.32E-28 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 143 176 9.9E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 185 218 0.3 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 815 848 0.12 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 605 638 1.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 395 428 24.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 227 260 9.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 563 596 16.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 773 806 0.59 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 941 974 0.0052 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 269 302 0.87 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 689 722 19.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 311 344 2.5E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 857 890 0.18 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 521 554 1.3 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 983 1016 10.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 479 512 94.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 59 92 0.0019 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 101 134 3.9E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 731 764 25.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 647 680 0.13 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 437 470 0.53 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 899 932 0.39 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SMART SM00028 353 386 0.064 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 PRINTS PR00381 Kinesin light chain signature 183 203 1.0E-5 T 11-10-2018 IPR002151 Kinesin light chain GO:0003777|GO:0005871 Reactome: R-HSA-2132295|Reactome: R-HSA-5625970|Reactome: R-HSA-6811434|Reactome: R-HSA-983189 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 PRINTS PR00381 Kinesin light chain signature 218 239 1.0E-5 T 11-10-2018 IPR002151 Kinesin light chain GO:0003777|GO:0005871 Reactome: R-HSA-2132295|Reactome: R-HSA-5625970|Reactome: R-HSA-6811434|Reactome: R-HSA-983189 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 PRINTS PR00381 Kinesin light chain signature 74 92 1.0E-5 T 11-10-2018 IPR002151 Kinesin light chain GO:0003777|GO:0005871 Reactome: R-HSA-2132295|Reactome: R-HSA-5625970|Reactome: R-HSA-6811434|Reactome: R-HSA-983189 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 PRINTS PR00381 Kinesin light chain signature 139 156 1.0E-5 T 11-10-2018 IPR002151 Kinesin light chain GO:0003777|GO:0005871 Reactome: R-HSA-2132295|Reactome: R-HSA-5625970|Reactome: R-HSA-6811434|Reactome: R-HSA-983189 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SUPERFAMILY SSF48452 273 465 4.6E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Gene3D G3DSA:1.25.40.10 846 1038 1.5E-53 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Gene3D G3DSA:1.25.40.10 44 255 8.0E-56 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Pfam PF13424 Tetratricopeptide repeat 604 675 1.3E-13 T 11-10-2018 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Pfam PF13424 Tetratricopeptide repeat 184 255 2.7E-14 T 11-10-2018 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Pfam PF13424 Tetratricopeptide repeat 730 801 2.4E-13 T 11-10-2018 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Pfam PF13424 Tetratricopeptide repeat 944 1011 1.3E-15 T 11-10-2018 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Pfam PF13424 Tetratricopeptide repeat 310 382 1.1E-14 T 11-10-2018 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Pfam PF13424 Tetratricopeptide repeat 100 171 1.0E-14 T 11-10-2018 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Pfam PF13424 Tetratricopeptide repeat 520 590 1.4E-11 T 11-10-2018 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Pfam PF13424 Tetratricopeptide repeat 818 885 7.8E-12 T 11-10-2018 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Pfam PF13424 Tetratricopeptide repeat 436 506 2.6E-12 T 11-10-2018 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Pfam PF07719 Tetratricopeptide repeat 62 89 3.2E-5 T 11-10-2018 IPR013105 Tetratricopeptide repeat 2 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SUPERFAMILY SSF48452 812 1011 3.32E-28 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Gene3D G3DSA:1.25.40.10 594 688 7.0E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Pfam PF13374 Tetratricopeptide repeat 899 938 2.7E-5 T 11-10-2018 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Pfam PF13374 Tetratricopeptide repeat 268 308 0.002 T 11-10-2018 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Pfam PF13374 Tetratricopeptide repeat 691 728 4.6E-4 T 11-10-2018 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Pfam PF13374 Tetratricopeptide repeat 396 435 5.5E-4 T 11-10-2018 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Gene3D G3DSA:1.25.40.10 427 593 8.3E-42 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 Gene3D G3DSA:1.25.40.10 256 426 1.3E-52 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3796 d2feb9f068e2deebb7523a3130516ecf 1040 SUPERFAMILY SSF48452 683 801 2.6E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1283 87eac6fc75c731afb305164604393a19 703 Pfam PF00990 Diguanylate cyclase, GGDEF domain 260 414 3.7E-50 T 11-10-2018 IPR000160 GGDEF domain Patl_1283 87eac6fc75c731afb305164604393a19 703 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 259 419 1.8E-43 T 11-10-2018 IPR000160 GGDEF domain Patl_1283 87eac6fc75c731afb305164604393a19 703 Pfam PF00563 EAL domain 437 683 4.4E-63 T 11-10-2018 IPR001633 EAL domain Patl_1283 87eac6fc75c731afb305164604393a19 703 SMART SM00267 249 421 4.2E-64 T 11-10-2018 IPR000160 GGDEF domain Patl_1283 87eac6fc75c731afb305164604393a19 703 Pfam PF17152 Periplasmic sensor domain 43 145 3.6E-12 T 11-10-2018 IPR033417 Periplasmic sensor domain CHASE8 Patl_1283 87eac6fc75c731afb305164604393a19 703 SUPERFAMILY SSF55073 265 423 3.61E-48 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_1283 87eac6fc75c731afb305164604393a19 703 SMART SM00052 431 688 9.6E-99 T 11-10-2018 IPR001633 EAL domain Patl_1283 87eac6fc75c731afb305164604393a19 703 SMART SM00304 183 236 4.0E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_1283 87eac6fc75c731afb305164604393a19 703 Gene3D G3DSA:3.20.20.450 434 697 3.3E-86 T 11-10-2018 IPR035919 EAL domain superfamily Patl_1283 87eac6fc75c731afb305164604393a19 703 SUPERFAMILY SSF141868 436 693 1.57E-74 T 11-10-2018 IPR035919 EAL domain superfamily Patl_1283 87eac6fc75c731afb305164604393a19 703 Gene3D G3DSA:1.20.1480.50 144 242 1.2E-5 T 11-10-2018 Patl_1283 87eac6fc75c731afb305164604393a19 703 Gene3D G3DSA:3.30.70.270 254 433 1.6E-58 T 11-10-2018 Patl_1283 87eac6fc75c731afb305164604393a19 703 SUPERFAMILY SSF158472 185 233 3.01E-5 T 11-10-2018 Patl_2532 9758570048a168d2d4a0dbac515668f2 967 SUPERFAMILY SSF50692 572 721 5.88E-29 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Patl_2532 9758570048a168d2d4a0dbac515668f2 967 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 21 72 9.5E-15 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Patl_2532 9758570048a168d2d4a0dbac515668f2 967 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 22 40 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Patl_2532 9758570048a168d2d4a0dbac515668f2 967 Pfam PF00384 Molybdopterin oxidoreductase 78 501 2.0E-85 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Patl_2532 9758570048a168d2d4a0dbac515668f2 967 Gene3D G3DSA:2.20.25.90 18 73 2.6E-14 T 11-10-2018 Patl_2532 9758570048a168d2d4a0dbac515668f2 967 Gene3D G3DSA:1.10.10.1100 871 924 4.5E-11 T 11-10-2018 Patl_2532 9758570048a168d2d4a0dbac515668f2 967 Pfam PF04324 BFD-like [2Fe-2S] binding domain 871 919 7.5E-9 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Patl_2532 9758570048a168d2d4a0dbac515668f2 967 SMART SM00926 17 74 3.2E-15 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Patl_2532 9758570048a168d2d4a0dbac515668f2 967 Pfam PF01568 Molydopterin dinucleotide binding domain 601 715 4.1E-19 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Patl_2532 9758570048a168d2d4a0dbac515668f2 967 Gene3D G3DSA:3.40.228.10 155 584 1.4E-179 T 11-10-2018 Patl_2532 9758570048a168d2d4a0dbac515668f2 967 Gene3D G3DSA:3.40.50.740 88 581 1.4E-179 T 11-10-2018 Patl_2532 9758570048a168d2d4a0dbac515668f2 967 Gene3D G3DSA:2.40.40.20 591 722 6.5E-29 T 11-10-2018 Patl_2532 9758570048a168d2d4a0dbac515668f2 967 SUPERFAMILY SSF53706 18 585 1.31E-190 T 11-10-2018 Patl_2532 9758570048a168d2d4a0dbac515668f2 967 PIRSF PIRSF036643 3 749 1.5E-158 T 11-10-2018 Patl_0845 02a57e7727d4d1c2fb812242d6930327 231 SUPERFAMILY SSF46785 7 93 5.81E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0845 02a57e7727d4d1c2fb812242d6930327 231 SMART SM00345 8 66 9.0E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_0845 02a57e7727d4d1c2fb812242d6930327 231 SMART SM00895 76 213 1.1E-20 T 11-10-2018 IPR011711 GntR, C-terminal Patl_0845 02a57e7727d4d1c2fb812242d6930327 231 Gene3D G3DSA:1.20.120.530 77 216 7.3E-22 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_0845 02a57e7727d4d1c2fb812242d6930327 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 66 3.1E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_0845 02a57e7727d4d1c2fb812242d6930327 231 SUPERFAMILY SSF48008 73 214 4.45E-16 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_0845 02a57e7727d4d1c2fb812242d6930327 231 Gene3D G3DSA:1.10.10.10 5 67 2.0E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0845 02a57e7727d4d1c2fb812242d6930327 231 Pfam PF07729 FCD domain 78 211 2.2E-16 T 11-10-2018 IPR011711 GntR, C-terminal Patl_4188 48e0f384a529f5a9caf5baa22eba6f87 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 3.5E-22 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_4188 48e0f384a529f5a9caf5baa22eba6f87 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 3.5E-22 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_4188 48e0f384a529f5a9caf5baa22eba6f87 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.5E-22 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_4188 48e0f384a529f5a9caf5baa22eba6f87 71 SUPERFAMILY SSF143800 1 67 1.29E-28 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_4188 48e0f384a529f5a9caf5baa22eba6f87 71 Gene3D G3DSA:2.30.170.50 1 70 4.8E-33 T 11-10-2018 Patl_4188 48e0f384a529f5a9caf5baa22eba6f87 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 29.966 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_4188 48e0f384a529f5a9caf5baa22eba6f87 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_4188 48e0f384a529f5a9caf5baa22eba6f87 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 1.0E-34 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_4188 48e0f384a529f5a9caf5baa22eba6f87 71 Pfam PF01197 Ribosomal protein L31 1 64 1.3E-31 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_2861 ab062de39da62f1d696dff333badae8a 695 Gene3D G3DSA:2.60.40.1760 13 235 7.1E-30 T 11-10-2018 Patl_2861 ab062de39da62f1d696dff333badae8a 695 Gene3D G3DSA:2.60.40.1180 618 665 2.6E-10 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_2861 ab062de39da62f1d696dff333badae8a 695 Pfam PF13802 Galactose mutarotase-like 147 206 1.2E-15 T 11-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain Patl_2861 ab062de39da62f1d696dff333badae8a 695 Gene3D G3DSA:3.20.20.80 238 617 3.0E-121 T 11-10-2018 Patl_2861 ab062de39da62f1d696dff333badae8a 695 SUPERFAMILY SSF51011 587 664 3.52E-17 T 11-10-2018 Patl_2861 ab062de39da62f1d696dff333badae8a 695 Pfam PF01055 Glycosyl hydrolases family 31 231 667 9.2E-112 T 11-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 Patl_2861 ab062de39da62f1d696dff333badae8a 695 SUPERFAMILY SSF74650 4 236 1.38E-37 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Patl_2861 ab062de39da62f1d696dff333badae8a 695 SUPERFAMILY SSF51445 241 584 2.9E-71 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_2651 e2e9022cc61ad8bf9664538b1b4a2fad 301 SUPERFAMILY SSF53850 97 299 1.77E-39 T 11-10-2018 Patl_2651 e2e9022cc61ad8bf9664538b1b4a2fad 301 Pfam PF03466 LysR substrate binding domain 97 296 1.7E-37 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_2651 e2e9022cc61ad8bf9664538b1b4a2fad 301 SUPERFAMILY SSF46785 11 91 1.19E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2651 e2e9022cc61ad8bf9664538b1b4a2fad 301 Gene3D G3DSA:1.10.10.10 11 97 1.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2651 e2e9022cc61ad8bf9664538b1b4a2fad 301 Gene3D G3DSA:3.40.190.290 99 296 2.9E-53 T 11-10-2018 Patl_2651 e2e9022cc61ad8bf9664538b1b4a2fad 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 71 1.0E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3194 3fcbf77afd0ad6a238626515c0c8a4b4 451 Pfam PF14793 Domain of unknown function (DUF4478) 5 110 4.8E-44 T 11-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 Patl_3194 3fcbf77afd0ad6a238626515c0c8a4b4 451 Gene3D G3DSA:3.30.1850.10 1 118 2.2E-42 T 11-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 Patl_3194 3fcbf77afd0ad6a238626515c0c8a4b4 451 SUPERFAMILY SSF102405 133 327 2.75E-37 T 11-10-2018 Patl_3194 3fcbf77afd0ad6a238626515c0c8a4b4 451 Gene3D G3DSA:3.40.50.450 120 450 3.4E-113 T 11-10-2018 Patl_3194 3fcbf77afd0ad6a238626515c0c8a4b4 451 Pfam PF03641 Possible lysine decarboxylase 188 326 1.1E-31 T 11-10-2018 IPR031100 LOG family Patl_3194 3fcbf77afd0ad6a238626515c0c8a4b4 451 Pfam PF11892 Domain of unknown function (DUF3412) 333 451 1.7E-54 T 11-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 Patl_2788 28eae842dcfc6224770a2b8c3a9b15fe 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.6E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2788 28eae842dcfc6224770a2b8c3a9b15fe 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.6E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2788 28eae842dcfc6224770a2b8c3a9b15fe 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.6E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2788 28eae842dcfc6224770a2b8c3a9b15fe 292 Gene3D G3DSA:3.40.190.290 92 291 9.9E-28 T 11-10-2018 Patl_2788 28eae842dcfc6224770a2b8c3a9b15fe 292 Pfam PF03466 LysR substrate binding domain 88 290 8.7E-32 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_2788 28eae842dcfc6224770a2b8c3a9b15fe 292 SUPERFAMILY SSF53850 90 291 6.15E-33 T 11-10-2018 Patl_2788 28eae842dcfc6224770a2b8c3a9b15fe 292 SUPERFAMILY SSF46785 2 111 5.44E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2788 28eae842dcfc6224770a2b8c3a9b15fe 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.2E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2788 28eae842dcfc6224770a2b8c3a9b15fe 292 Gene3D G3DSA:1.10.10.10 1 91 3.1E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_4079 02641e807684399dd642844cf85ba6ac 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 722 0.0 T 11-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 Patl_4079 02641e807684399dd642844cf85ba6ac 724 Gene3D G3DSA:3.40.50.300 10 274 3.5E-100 T 11-10-2018 Patl_4079 02641e807684399dd642844cf85ba6ac 724 SUPERFAMILY SSF52540 6 642 2.54E-179 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4079 02641e807684399dd642844cf85ba6ac 724 Gene3D G3DSA:3.40.50.300 281 636 3.3E-131 T 11-10-2018 Patl_4079 02641e807684399dd642844cf85ba6ac 724 Gene3D G3DSA:1.10.486.10 382 538 3.3E-131 T 11-10-2018 Patl_4079 02641e807684399dd642844cf85ba6ac 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 1.4E-77 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Patl_4079 02641e807684399dd642844cf85ba6ac 724 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 1.1E-70 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Patl_4079 02641e807684399dd642844cf85ba6ac 724 Gene3D G3DSA:1.10.10.160 114 187 3.5E-100 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily Patl_1546 09bf00261e904d3dbdb6ca77922633a6 245 SUPERFAMILY SSF53474 8 244 3.89E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1546 09bf00261e904d3dbdb6ca77922633a6 245 Gene3D G3DSA:3.40.50.1820 8 243 9.0E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1546 09bf00261e904d3dbdb6ca77922633a6 245 Pfam PF01738 Dienelactone hydrolase family 19 243 8.0E-26 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Patl_4282 6890c5da513a20fbd60f55c7526665c5 237 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 6.7E-113 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Patl_4282 6890c5da513a20fbd60f55c7526665c5 237 Pfam PF03725 3' exoribonuclease family, domain 2 157 223 4.7E-10 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Patl_4282 6890c5da513a20fbd60f55c7526665c5 237 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.078 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Patl_4282 6890c5da513a20fbd60f55c7526665c5 237 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.4E-23 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Patl_4282 6890c5da513a20fbd60f55c7526665c5 237 Gene3D G3DSA:3.30.230.70 9 237 1.8E-63 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Patl_4282 6890c5da513a20fbd60f55c7526665c5 237 SUPERFAMILY SSF54211 1 181 8.1E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_4282 6890c5da513a20fbd60f55c7526665c5 237 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site Patl_4282 6890c5da513a20fbd60f55c7526665c5 237 SUPERFAMILY SSF55666 153 236 3.93E-26 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Patl_3658 8c3881909ee77b44ea1020c8006b5c60 432 Pfam PF07690 Major Facilitator Superfamily 14 385 4.6E-52 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_3658 8c3881909ee77b44ea1020c8006b5c60 432 Gene3D G3DSA:1.20.1250.20 1 203 4.0E-43 T 11-10-2018 Patl_3658 8c3881909ee77b44ea1020c8006b5c60 432 Gene3D G3DSA:1.20.1250.20 227 426 9.3E-31 T 11-10-2018 Patl_3658 8c3881909ee77b44ea1020c8006b5c60 432 SUPERFAMILY SSF103473 4 426 1.31E-79 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_0390 5c23dc964eda27b2c4dc7ee34bc0e097 206 Gene3D G3DSA:1.20.120.1760 3 199 9.8E-22 T 11-10-2018 Patl_0390 5c23dc964eda27b2c4dc7ee34bc0e097 206 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Patl_0390 5c23dc964eda27b2c4dc7ee34bc0e097 206 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 1.4E-9 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Patl_0397 bfea13c43ce70e59144a014e841c2d81 415 Pfam PF07690 Major Facilitator Superfamily 11 302 5.4E-17 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_0397 bfea13c43ce70e59144a014e841c2d81 415 SUPERFAMILY SSF103473 10 400 3.53E-33 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_0397 bfea13c43ce70e59144a014e841c2d81 415 Gene3D G3DSA:1.20.1250.20 8 193 4.8E-15 T 11-10-2018 Patl_0397 bfea13c43ce70e59144a014e841c2d81 415 Gene3D G3DSA:1.20.1250.20 225 406 1.1E-10 T 11-10-2018 Patl_1527 3071deb8ffa2233028f302002a7d52ca 230 SMART SM00862 152 229 3.2E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_1527 3071deb8ffa2233028f302002a7d52ca 230 SUPERFAMILY SSF46894 131 229 1.07E-23 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_1527 3071deb8ffa2233028f302002a7d52ca 230 SMART SM00448 5 115 5.6E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1527 3071deb8ffa2233028f302002a7d52ca 230 Gene3D G3DSA:3.40.50.2300 2 126 7.0E-36 T 11-10-2018 Patl_1527 3071deb8ffa2233028f302002a7d52ca 230 SUPERFAMILY SSF52172 3 127 2.13E-39 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1527 3071deb8ffa2233028f302002a7d52ca 230 Gene3D G3DSA:1.10.10.10 128 230 1.5E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1527 3071deb8ffa2233028f302002a7d52ca 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 1.9E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_1527 3071deb8ffa2233028f302002a7d52ca 230 Pfam PF00072 Response regulator receiver domain 7 115 2.2E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1371 2fe0f1c82f031dc58b79150e5a5b4aa6 682 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 632 646 9.9E-7 T 11-10-2018 Patl_1371 2fe0f1c82f031dc58b79150e5a5b4aa6 682 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 409 9.9E-7 T 11-10-2018 Patl_1371 2fe0f1c82f031dc58b79150e5a5b4aa6 682 Gene3D G3DSA:3.20.20.70 13 380 2.8E-123 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_1371 2fe0f1c82f031dc58b79150e5a5b4aa6 682 Gene3D G3DSA:3.40.50.720 386 676 7.2E-114 T 11-10-2018 Patl_1371 2fe0f1c82f031dc58b79150e5a5b4aa6 682 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 470 488 1.9E-18 T 11-10-2018 Patl_1371 2fe0f1c82f031dc58b79150e5a5b4aa6 682 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 631 647 1.9E-18 T 11-10-2018 Patl_1371 2fe0f1c82f031dc58b79150e5a5b4aa6 682 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 388 407 1.9E-18 T 11-10-2018 Patl_1371 2fe0f1c82f031dc58b79150e5a5b4aa6 682 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 510 528 1.9E-18 T 11-10-2018 Patl_1371 2fe0f1c82f031dc58b79150e5a5b4aa6 682 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 16 341 3.0E-83 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Patl_1371 2fe0f1c82f031dc58b79150e5a5b4aa6 682 Gene3D G3DSA:3.50.50.60 482 638 7.2E-114 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1371 2fe0f1c82f031dc58b79150e5a5b4aa6 682 SUPERFAMILY SSF51905 481 640 2.0E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1371 2fe0f1c82f031dc58b79150e5a5b4aa6 682 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 386 648 4.7E-25 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Patl_1371 2fe0f1c82f031dc58b79150e5a5b4aa6 682 SUPERFAMILY SSF51395 14 372 1.08E-109 T 11-10-2018 Patl_1371 2fe0f1c82f031dc58b79150e5a5b4aa6 682 SUPERFAMILY SSF51971 344 533 1.02E-42 T 11-10-2018 Patl_2562 6937a260b26ecb392a10825599c3ee12 298 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 20 295 2.7E-72 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Patl_2562 6937a260b26ecb392a10825599c3ee12 298 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 33 291 7.8E-89 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Patl_2562 6937a260b26ecb392a10825599c3ee12 298 SUPERFAMILY SSF53335 13 292 8.22E-58 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_2562 6937a260b26ecb392a10825599c3ee12 298 Gene3D G3DSA:3.40.50.150 95 295 2.2E-58 T 11-10-2018 Patl_2562 6937a260b26ecb392a10825599c3ee12 298 Gene3D G3DSA:1.10.8.10 12 94 7.4E-21 T 11-10-2018 Patl_2562 6937a260b26ecb392a10825599c3ee12 298 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 13 295 40.994 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Patl_2562 6937a260b26ecb392a10825599c3ee12 298 Pfam PF13847 Methyltransferase domain 120 264 4.9E-19 T 11-10-2018 IPR025714 Methyltransferase domain Patl_2562 6937a260b26ecb392a10825599c3ee12 298 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 200 206 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Patl_3694 09953b6f91de474867b01354f95423e7 114 Gene3D G3DSA:3.40.1350.10 5 112 3.1E-25 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Patl_3694 09953b6f91de474867b01354f95423e7 114 SUPERFAMILY SSF52980 5 97 5.81E-17 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Patl_3694 09953b6f91de474867b01354f95423e7 114 Pfam PF02021 Uncharacterised protein family UPF0102 6 98 4.0E-26 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 Patl_3694 09953b6f91de474867b01354f95423e7 114 Hamap MF_00048 UPF0102 protein YraN [yraN]. 1 111 17.239 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 Patl_3694 09953b6f91de474867b01354f95423e7 114 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 2 103 2.5E-22 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 Patl_2118 234f939c36d0c72f76c928402decf6a6 312 Gene3D G3DSA:3.30.160.60 52 90 8.4E-10 T 11-10-2018 Patl_2118 234f939c36d0c72f76c928402decf6a6 312 Pfam PF02618 YceG-like family 24 306 1.7E-82 T 11-10-2018 IPR003770 Endolytic murein transglycosylase Patl_2118 234f939c36d0c72f76c928402decf6a6 312 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 1 312 31.851 T 11-10-2018 IPR003770 Endolytic murein transglycosylase Patl_2118 234f939c36d0c72f76c928402decf6a6 312 Gene3D G3DSA:3.30.160.60 282 311 4.4E-12 T 11-10-2018 Patl_2118 234f939c36d0c72f76c928402decf6a6 312 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 14 308 1.2E-86 T 11-10-2018 IPR003770 Endolytic murein transglycosylase Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 SUPERFAMILY SSF56059 128 401 1.94E-107 T 11-10-2018 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 Gene3D G3DSA:3.30.470.20 665 935 2.9E-119 T 11-10-2018 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 SUPERFAMILY SSF52440 1 127 1.73E-50 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 4.3E-39 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 Gene3D G3DSA:3.30.470.20 119 403 4.9E-128 T 11-10-2018 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 Gene3D G3DSA:3.40.50.20 1 116 2.7E-50 T 11-10-2018 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.027 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 SUPERFAMILY SSF48108 396 554 6.15E-53 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 5.8E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 5.8E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 5.8E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 5.8E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 5.8E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 5.8E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 5.8E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 6.6E-34 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 7.6E-73 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 Gene3D G3DSA:3.40.50.1380 937 1072 3.1E-35 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 Gene3D G3DSA:3.40.50.20 554 662 6.9E-48 T 11-10-2018 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 SUPERFAMILY SSF52335 936 1070 4.84E-36 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 SUPERFAMILY SSF52440 556 675 2.59E-48 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 SUPERFAMILY SSF56059 673 932 3.01E-102 T 11-10-2018 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1052 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 Pfam PF02142 MGS-like domain 956 1041 1.6E-16 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.369 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 SMART SM01096 424 547 2.4E-74 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 Gene3D G3DSA:1.10.1030.10 404 553 5.4E-49 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2214 67335ee89d469ed25a7d45d3a51df05f 1072 SMART SM00851 955 1041 6.0E-30 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Patl_3644 aa62bdc53beab13124701240b1c0cd1b 162 Gene3D G3DSA:3.40.50.300 1 162 3.7E-58 T 11-10-2018 Patl_3644 aa62bdc53beab13124701240b1c0cd1b 162 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 4 157 1.5E-46 T 11-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 Patl_3644 aa62bdc53beab13124701240b1c0cd1b 162 SUPERFAMILY SSF52540 1 160 1.16E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3644 aa62bdc53beab13124701240b1c0cd1b 162 Pfam PF01202 Shikimate kinase 9 159 1.3E-12 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Patl_4217 b5559ae6bba61bea875820fab2af783f 262 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Patl_4217 b5559ae6bba61bea875820fab2af783f 262 Pfam PF01026 TatD related DNase 15 258 2.5E-60 T 11-10-2018 IPR001130 TatD family GO:0016788 Patl_4217 b5559ae6bba61bea875820fab2af783f 262 PIRSF PIRSF005902 1 261 9.1E-71 T 11-10-2018 IPR001130 TatD family GO:0016788 Patl_4217 b5559ae6bba61bea875820fab2af783f 262 SUPERFAMILY SSF51556 4 260 1.93E-72 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_4217 b5559ae6bba61bea875820fab2af783f 262 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Patl_4217 b5559ae6bba61bea875820fab2af783f 262 Gene3D G3DSA:3.20.20.140 2 261 2.6E-82 T 11-10-2018 Patl_3006 7e55cb23b534c5701ac7b7d93131a099 544 Gene3D G3DSA:3.90.76.10 50 222 1.6E-163 T 11-10-2018 Patl_3006 7e55cb23b534c5701ac7b7d93131a099 544 PIRSF PIRSF002741 8 543 1.1E-103 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Patl_3006 7e55cb23b534c5701ac7b7d93131a099 544 Gene3D G3DSA:3.10.105.10 302 520 1.6E-163 T 11-10-2018 Patl_3006 7e55cb23b534c5701ac7b7d93131a099 544 SUPERFAMILY SSF53850 40 542 3.44E-139 T 11-10-2018 Patl_3006 7e55cb23b534c5701ac7b7d93131a099 544 Gene3D G3DSA:3.40.190.10 223 532 1.6E-163 T 11-10-2018 Patl_3006 7e55cb23b534c5701ac7b7d93131a099 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 462 7.7E-87 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain Patl_2333 b8b6de225f4b9c64b6ff51b291e65f8b 306 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 78 177 2.6E-5 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Patl_2333 b8b6de225f4b9c64b6ff51b291e65f8b 306 Gene3D G3DSA:3.40.630.10 4 306 2.1E-108 T 11-10-2018 Patl_2333 b8b6de225f4b9c64b6ff51b291e65f8b 306 SUPERFAMILY SSF53187 36 277 7.61E-33 T 11-10-2018 Patl_2587 3dbe8a8c24df3dddddd62ae6d9b281ee 556 Gene3D G3DSA:3.50.50.60 6 528 3.3E-182 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2587 3dbe8a8c24df3dddddd62ae6d9b281ee 556 Gene3D G3DSA:4.10.450.10 39 198 3.3E-182 T 11-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 Patl_2587 3dbe8a8c24df3dddddd62ae6d9b281ee 556 TIGRFAM TIGR01810 betA: choline dehydrogenase 7 534 6.2E-242 T 11-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 Patl_2587 3dbe8a8c24df3dddddd62ae6d9b281ee 556 Gene3D G3DSA:1.10.1220.110 98 151 3.3E-182 T 11-10-2018 Patl_2587 3dbe8a8c24df3dddddd62ae6d9b281ee 556 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 83 106 - T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Patl_2587 3dbe8a8c24df3dddddd62ae6d9b281ee 556 SUPERFAMILY SSF54373 292 474 4.41E-63 T 11-10-2018 Patl_2587 3dbe8a8c24df3dddddd62ae6d9b281ee 556 SUPERFAMILY SSF51905 2 532 2.22E-87 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2587 3dbe8a8c24df3dddddd62ae6d9b281ee 556 Gene3D G3DSA:3.30.410.40 152 471 3.3E-182 T 11-10-2018 Patl_2587 3dbe8a8c24df3dddddd62ae6d9b281ee 556 Pfam PF00732 GMC oxidoreductase 6 297 3.9E-95 T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Patl_2587 3dbe8a8c24df3dddddd62ae6d9b281ee 556 Pfam PF05199 GMC oxidoreductase 388 524 1.5E-40 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Patl_2587 3dbe8a8c24df3dddddd62ae6d9b281ee 556 PIRSF PIRSF000137 1 540 1.4E-153 T 11-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Patl_2587 3dbe8a8c24df3dddddd62ae6d9b281ee 556 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 256 270 - T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Patl_4019 dba19b91340fe5aea633f52f05d0a36e 445 SUPERFAMILY SSF50494 30 234 2.14E-33 T 11-10-2018 IPR009003 Peptidase S1, PA clan Patl_4019 dba19b91340fe5aea633f52f05d0a36e 445 PRINTS PR00834 HtrA/DegQ protease family signature 85 97 9.2E-13 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Patl_4019 dba19b91340fe5aea633f52f05d0a36e 445 PRINTS PR00834 HtrA/DegQ protease family signature 205 222 9.2E-13 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Patl_4019 dba19b91340fe5aea633f52f05d0a36e 445 PRINTS PR00834 HtrA/DegQ protease family signature 153 177 9.2E-13 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Patl_4019 dba19b91340fe5aea633f52f05d0a36e 445 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 9.2E-13 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Patl_4019 dba19b91340fe5aea633f52f05d0a36e 445 Pfam PF13365 Trypsin-like peptidase domain 76 212 9.5E-24 T 11-10-2018 Patl_4019 dba19b91340fe5aea633f52f05d0a36e 445 Gene3D G3DSA:2.40.10.120 39 238 1.9E-32 T 11-10-2018 Patl_2291 f71e4c3c61038a7c4e95779fa3737201 464 Gene3D G3DSA:3.30.565.10 316 453 2.5E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2291 f71e4c3c61038a7c4e95779fa3737201 464 Gene3D G3DSA:3.30.450.20 29 206 5.8E-45 T 11-10-2018 Patl_2291 f71e4c3c61038a7c4e95779fa3737201 464 SUPERFAMILY SSF55874 330 448 5.37E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2291 f71e4c3c61038a7c4e95779fa3737201 464 PIRSF PIRSF037314 1 463 1.4E-198 T 11-10-2018 IPR017171 Signal transduction histidine kinase, MctS Patl_2291 f71e4c3c61038a7c4e95779fa3737201 464 SMART SM00387 356 451 1.6E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2291 f71e4c3c61038a7c4e95779fa3737201 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 449 3.3E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2291 f71e4c3c61038a7c4e95779fa3737201 464 Pfam PF07730 Histidine kinase 251 317 5.5E-14 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Patl_2291 f71e4c3c61038a7c4e95779fa3737201 464 SMART SM01049 42 134 8.0E-26 T 11-10-2018 IPR033480 Single Cache domain 2 Patl_2291 f71e4c3c61038a7c4e95779fa3737201 464 Pfam PF17200 Single Cache domain 2 45 194 1.9E-40 T 11-10-2018 IPR033480 Single Cache domain 2 Patl_3173 3905cccace8675066d47d5a5669af091 288 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3173 3905cccace8675066d47d5a5669af091 288 Pfam PF16074 Type IV Pilus-assembly protein W 148 278 3.6E-18 T 11-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 Patl_3173 3905cccace8675066d47d5a5669af091 288 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 1.6E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3173 3905cccace8675066d47d5a5669af091 288 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 3.3E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_1054 61b11e0adc6942071cccbdd09240568d 436 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 5.2E-28 T 11-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 Patl_1054 61b11e0adc6942071cccbdd09240568d 436 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 97 425 3.7E-134 T 11-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 Patl_1054 61b11e0adc6942071cccbdd09240568d 436 SUPERFAMILY SSF47384 191 271 7.06E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_1054 61b11e0adc6942071cccbdd09240568d 436 SUPERFAMILY SSF55874 262 425 1.7E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1054 61b11e0adc6942071cccbdd09240568d 436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 4.2E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1054 61b11e0adc6942071cccbdd09240568d 436 Gene3D G3DSA:3.30.450.20 87 201 5.6E-5 T 11-10-2018 Patl_1054 61b11e0adc6942071cccbdd09240568d 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 1.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1054 61b11e0adc6942071cccbdd09240568d 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 1.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1054 61b11e0adc6942071cccbdd09240568d 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 1.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1054 61b11e0adc6942071cccbdd09240568d 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 1.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1054 61b11e0adc6942071cccbdd09240568d 436 Gene3D G3DSA:3.30.565.10 278 433 1.2E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1054 61b11e0adc6942071cccbdd09240568d 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 426 2.6E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1054 61b11e0adc6942071cccbdd09240568d 436 SMART SM00387 317 429 5.8E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1054 61b11e0adc6942071cccbdd09240568d 436 SUPERFAMILY SSF55785 91 197 1.28E-6 T 11-10-2018 IPR035965 PAS domain superfamily Patl_1054 61b11e0adc6942071cccbdd09240568d 436 Gene3D G3DSA:1.10.287.130 202 272 6.9E-22 T 11-10-2018 Patl_1054 61b11e0adc6942071cccbdd09240568d 436 Pfam PF00989 PAS fold 100 175 7.8E-6 T 11-10-2018 IPR013767 PAS fold GO:0006355 Patl_1054 61b11e0adc6942071cccbdd09240568d 436 SMART SM00388 205 272 6.7E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2236 7f9ed19d43c22799a6c85d8b487a735e 726 Pfam PF01568 Molydopterin dinucleotide binding domain 589 713 3.2E-19 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Patl_2236 7f9ed19d43c22799a6c85d8b487a735e 726 Gene3D G3DSA:2.40.40.20 567 724 2.0E-27 T 11-10-2018 Patl_2236 7f9ed19d43c22799a6c85d8b487a735e 726 Pfam PF00384 Molybdopterin oxidoreductase 62 482 1.4E-46 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Patl_2236 7f9ed19d43c22799a6c85d8b487a735e 726 Gene3D G3DSA:3.40.228.10 137 335 1.6E-97 T 11-10-2018 Patl_2236 7f9ed19d43c22799a6c85d8b487a735e 726 SUPERFAMILY SSF53706 7 486 1.83E-117 T 11-10-2018 Patl_2236 7f9ed19d43c22799a6c85d8b487a735e 726 Gene3D G3DSA:3.40.50.740 72 484 1.6E-97 T 11-10-2018 Patl_2236 7f9ed19d43c22799a6c85d8b487a735e 726 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 10 55 1.2E-10 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Patl_2236 7f9ed19d43c22799a6c85d8b487a735e 726 SUPERFAMILY SSF50692 589 723 5.2E-30 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Patl_2236 7f9ed19d43c22799a6c85d8b487a735e 726 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 632 659 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Patl_2236 7f9ed19d43c22799a6c85d8b487a735e 726 Gene3D G3DSA:2.20.25.90 1 64 1.2E-14 T 11-10-2018 Patl_2236 7f9ed19d43c22799a6c85d8b487a735e 726 SMART SM00926 5 59 4.5E-13 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 Gene3D G3DSA:3.40.50.2300 468 603 4.5E-15 T 11-10-2018 Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 2.5E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 2.5E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 2.5E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 2.5E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 SUPERFAMILY SSF52172 602 720 4.7E-40 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 SMART SM00387 341 456 5.4E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 455 1.0E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 Gene3D G3DSA:1.10.287.130 199 292 5.9E-22 T 11-10-2018 Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 Gene3D G3DSA:3.40.50.12740 604 720 8.7E-44 T 11-10-2018 Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 SMART SM00448 603 715 1.4E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 SMART SM00448 470 582 1.9E-4 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 SUPERFAMILY SSF55874 283 455 2.88E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 SMART SM00388 231 294 1.9E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 Gene3D G3DSA:3.30.565.10 293 462 7.9E-51 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 99 2.2E-9 T 11-10-2018 IPR029095 NarX-like, N-terminal Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 Pfam PF00072 Response regulator receiver domain 605 715 1.0E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 Pfam PF00072 Response regulator receiver domain 474 579 1.7E-10 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 SUPERFAMILY SSF47384 220 295 8.83E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 SUPERFAMILY SSF52172 469 587 2.85E-15 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2818 c94eb70bf1d004346c950589e0e61ace 720 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 294 2.0E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3883 3382ff2cad756ea22e097484cd42b426 328 PRINTS PR00069 Aldo-keto reductase signature 105 123 1.7E-6 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Patl_3883 3382ff2cad756ea22e097484cd42b426 328 PRINTS PR00069 Aldo-keto reductase signature 136 153 1.7E-6 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Patl_3883 3382ff2cad756ea22e097484cd42b426 328 PRINTS PR00069 Aldo-keto reductase signature 41 65 1.7E-6 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Patl_3883 3382ff2cad756ea22e097484cd42b426 328 Gene3D G3DSA:3.20.20.100 7 326 2.6E-106 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Patl_3883 3382ff2cad756ea22e097484cd42b426 328 Pfam PF00248 Aldo/keto reductase family 14 304 9.0E-74 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain Patl_3883 3382ff2cad756ea22e097484cd42b426 328 SUPERFAMILY SSF51430 9 309 7.99E-91 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Patl_0747 6183a2183092a9241410925f5413b213 375 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 95 331 4.3E-9 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Patl_0747 6183a2183092a9241410925f5413b213 375 Gene3D G3DSA:3.20.20.10 15 243 1.9E-150 T 11-10-2018 IPR029066 PLP-binding barrel Patl_0747 6183a2183092a9241410925f5413b213 375 Gene3D G3DSA:2.40.37.10 6 370 1.9E-150 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Patl_0747 6183a2183092a9241410925f5413b213 375 PIRSF PIRSF038941 2 375 6.0E-163 T 11-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 Patl_0747 6183a2183092a9241410925f5413b213 375 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 374 4.1E-156 T 11-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 Patl_0747 6183a2183092a9241410925f5413b213 375 SUPERFAMILY SSF50621 213 364 6.28E-31 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Patl_0747 6183a2183092a9241410925f5413b213 375 SUPERFAMILY SSF51419 15 246 8.34E-40 T 11-10-2018 IPR029066 PLP-binding barrel Patl_0538 5b404658dcd10a397ca1e67df214bbb0 154 Hamap MF_00173 Arginine repressor [argR]. 1 154 57.323 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Patl_0538 5b404658dcd10a397ca1e67df214bbb0 154 PRINTS PR01467 Bacterial arginine repressor signature 120 135 5.2E-21 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Patl_0538 5b404658dcd10a397ca1e67df214bbb0 154 PRINTS PR01467 Bacterial arginine repressor signature 89 102 5.2E-21 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Patl_0538 5b404658dcd10a397ca1e67df214bbb0 154 PRINTS PR01467 Bacterial arginine repressor signature 41 56 5.2E-21 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Patl_0538 5b404658dcd10a397ca1e67df214bbb0 154 PRINTS PR01467 Bacterial arginine repressor signature 24 37 5.2E-21 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Patl_0538 5b404658dcd10a397ca1e67df214bbb0 154 Pfam PF01316 Arginine repressor, DNA binding domain 5 73 6.5E-21 T 11-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 Patl_0538 5b404658dcd10a397ca1e67df214bbb0 154 TIGRFAM TIGR01529 argR_whole: arginine repressor 9 150 3.4E-41 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Patl_0538 5b404658dcd10a397ca1e67df214bbb0 154 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 88 129 8.0E-17 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Patl_0538 5b404658dcd10a397ca1e67df214bbb0 154 SUPERFAMILY SSF55252 81 144 1.7E-18 T 11-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 Patl_0538 5b404658dcd10a397ca1e67df214bbb0 154 Gene3D G3DSA:3.30.1360.40 74 154 6.2E-30 T 11-10-2018 Patl_0538 5b404658dcd10a397ca1e67df214bbb0 154 SUPERFAMILY SSF46785 3 75 1.09E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0538 5b404658dcd10a397ca1e67df214bbb0 154 Pfam PF02863 Arginine repressor, C-terminal domain 81 147 7.9E-22 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Patl_0538 5b404658dcd10a397ca1e67df214bbb0 154 Gene3D G3DSA:1.10.10.10 1 73 1.1E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3850 aae9e19792613d43c9bf9546e32389da 546 Gene3D G3DSA:3.40.50.970 1 178 6.7E-62 T 11-10-2018 Patl_3850 aae9e19792613d43c9bf9546e32389da 546 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 378 524 5.8E-38 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Patl_3850 aae9e19792613d43c9bf9546e32389da 546 Gene3D G3DSA:3.40.50.970 350 543 5.8E-51 T 11-10-2018 Patl_3850 aae9e19792613d43c9bf9546e32389da 546 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 415 434 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Patl_3850 aae9e19792613d43c9bf9546e32389da 546 SUPERFAMILY SSF52518 1 175 4.63E-49 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Patl_3850 aae9e19792613d43c9bf9546e32389da 546 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 318 6.6E-30 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Patl_3850 aae9e19792613d43c9bf9546e32389da 546 SUPERFAMILY SSF52467 178 361 1.76E-39 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Patl_3850 aae9e19792613d43c9bf9546e32389da 546 Gene3D G3DSA:3.40.50.1220 180 330 2.1E-37 T 11-10-2018 Patl_3850 aae9e19792613d43c9bf9546e32389da 546 SUPERFAMILY SSF52518 358 535 4.18E-56 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Patl_3850 aae9e19792613d43c9bf9546e32389da 546 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 168 1.1E-53 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Patl_1618 76c70b2c10c353752830c4b049180b31 447 Gene3D G3DSA:3.40.50.300 215 411 1.8E-46 T 11-10-2018 Patl_1618 76c70b2c10c353752830c4b049180b31 447 Pfam PF00270 DEAD/DEAH box helicase 25 190 2.8E-46 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Patl_1618 76c70b2c10c353752830c4b049180b31 447 SMART SM00490 260 341 5.3E-28 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_1618 76c70b2c10c353752830c4b049180b31 447 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Patl_1618 76c70b2c10c353752830c4b049180b31 447 Pfam PF00271 Helicase conserved C-terminal domain 236 341 1.8E-26 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_1618 76c70b2c10c353752830c4b049180b31 447 Gene3D G3DSA:3.40.50.300 1 212 2.1E-66 T 11-10-2018 Patl_1618 76c70b2c10c353752830c4b049180b31 447 SUPERFAMILY SSF52540 73 359 6.32E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1618 76c70b2c10c353752830c4b049180b31 447 SMART SM00487 20 223 6.8E-50 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_4306 20f9781eae4e1c250440c91a67d89b35 633 Pfam PF01134 Glucose inhibited division protein A 8 399 3.0E-166 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Patl_4306 20f9781eae4e1c250440c91a67d89b35 633 Gene3D G3DSA:1.10.10.1800 459 550 1.9E-30 T 11-10-2018 Patl_4306 20f9781eae4e1c250440c91a67d89b35 633 Pfam PF13932 GidA associated domain 401 616 2.7E-77 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 Patl_4306 20f9781eae4e1c250440c91a67d89b35 633 SUPERFAMILY SSF51905 5 261 1.99E-50 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_4306 20f9781eae4e1c250440c91a67d89b35 633 Gene3D G3DSA:1.10.150.570 570 622 3.7E-23 T 11-10-2018 Patl_4306 20f9781eae4e1c250440c91a67d89b35 633 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 6.0E-285 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Patl_4306 20f9781eae4e1c250440c91a67d89b35 633 Gene3D G3DSA:3.50.50.60 1 232 2.2E-90 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_4306 20f9781eae4e1c250440c91a67d89b35 633 Gene3D G3DSA:3.50.50.60 305 458 5.5E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_4306 20f9781eae4e1c250440c91a67d89b35 633 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Patl_4306 20f9781eae4e1c250440c91a67d89b35 633 SMART SM01228 546 617 6.1E-44 T 11-10-2018 Patl_4306 20f9781eae4e1c250440c91a67d89b35 633 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.869 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Patl_4306 20f9781eae4e1c250440c91a67d89b35 633 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Patl_4224 2eef4c2f6ab96f75631b52e3609db35b 163 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 30.753 T 11-10-2018 IPR033747 Class I PurE Patl_4224 2eef4c2f6ab96f75631b52e3609db35b 163 SUPERFAMILY SSF52255 3 156 3.53E-61 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Patl_4224 2eef4c2f6ab96f75631b52e3609db35b 163 Pfam PF00731 AIR carboxylase 3 150 1.7E-60 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Patl_4224 2eef4c2f6ab96f75631b52e3609db35b 163 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 156 4.7E-61 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Patl_4224 2eef4c2f6ab96f75631b52e3609db35b 163 SMART SM01001 2 153 1.1E-95 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Patl_4224 2eef4c2f6ab96f75631b52e3609db35b 163 PIRSF PIRSF001338 1 161 2.3E-66 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Patl_4224 2eef4c2f6ab96f75631b52e3609db35b 163 Gene3D G3DSA:3.40.50.7700 1 160 4.9E-68 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Patl_2056 e02bcbc81a6a71041bb61ca21128d102 469 PRINTS PR00149 Fumarate lyase superfamily signature 189 207 5.9E-33 T 11-10-2018 IPR000362 Fumarate lyase family Patl_2056 e02bcbc81a6a71041bb61ca21128d102 469 PRINTS PR00149 Fumarate lyase superfamily signature 326 342 5.9E-33 T 11-10-2018 IPR000362 Fumarate lyase family Patl_2056 e02bcbc81a6a71041bb61ca21128d102 469 PRINTS PR00149 Fumarate lyase superfamily signature 280 307 5.9E-33 T 11-10-2018 IPR000362 Fumarate lyase family Patl_2056 e02bcbc81a6a71041bb61ca21128d102 469 PRINTS PR00149 Fumarate lyase superfamily signature 143 161 5.9E-33 T 11-10-2018 IPR000362 Fumarate lyase family Patl_2056 e02bcbc81a6a71041bb61ca21128d102 469 Gene3D G3DSA:1.10.275.10 32 147 6.6E-39 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal Patl_2056 e02bcbc81a6a71041bb61ca21128d102 469 Pfam PF00206 Lyase 35 351 1.3E-95 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal Patl_2056 e02bcbc81a6a71041bb61ca21128d102 469 ProSitePatterns PS00163 Fumarate lyases signature. 326 335 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Patl_2056 e02bcbc81a6a71041bb61ca21128d102 469 Gene3D G3DSA:1.20.200.10 148 414 8.0E-101 T 11-10-2018 Patl_2056 e02bcbc81a6a71041bb61ca21128d102 469 Gene3D G3DSA:1.10.40.30 417 468 2.5E-14 T 11-10-2018 Patl_2056 e02bcbc81a6a71041bb61ca21128d102 469 SUPERFAMILY SSF48557 33 469 2.98E-130 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 Patl_2056 e02bcbc81a6a71041bb61ca21128d102 469 Pfam PF10415 Fumarase C C-terminus 417 469 3.6E-15 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 Pfam PF02824 TGS domain 4 61 5.5E-12 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 Gene3D G3DSA:3.40.50.800 532 638 2.5E-31 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 SUPERFAMILY SSF81271 3 61 8.83E-15 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 Gene3D G3DSA:3.30.980.10 69 222 9.9E-63 T 11-10-2018 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 2.0E-14 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 Gene3D G3DSA:3.30.54.20 130 187 9.9E-63 T 11-10-2018 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 SMART SM00863 170 219 2.3E-20 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 Gene3D G3DSA:3.30.930.10 223 531 7.2E-129 T 11-10-2018 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.0E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.0E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.0E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.0E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.0E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 SUPERFAMILY SSF52954 529 634 3.17E-31 T 11-10-2018 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 SUPERFAMILY SSF55186 63 241 4.58E-65 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 322 529 2.6E-45 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 Gene3D G3DSA:3.10.20.30 3 62 5.8E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.561 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 Pfam PF03129 Anticodon binding domain 541 627 4.1E-21 T 11-10-2018 IPR004154 Anticodon-binding Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 SUPERFAMILY SSF55681 243 526 6.17E-98 T 11-10-2018 Patl_2499 29dacdda6692dd7eaf2561d1a9714923 638 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 627 1.1E-238 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Patl_3155 d10d470487ba26daa9d64c4423209de1 192 SUPERFAMILY SSF88659 124 186 5.05E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_3155 d10d470487ba26daa9d64c4423209de1 192 Pfam PF04542 Sigma-70 region 2 25 92 1.8E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Patl_3155 d10d470487ba26daa9d64c4423209de1 192 Gene3D G3DSA:1.10.1740.10 1 121 2.8E-42 T 11-10-2018 Patl_3155 d10d470487ba26daa9d64c4423209de1 192 Gene3D G3DSA:1.10.10.10 122 192 9.0E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3155 d10d470487ba26daa9d64c4423209de1 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 184 5.2E-31 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Patl_3155 d10d470487ba26daa9d64c4423209de1 192 Pfam PF08281 Sigma-70, region 4 134 182 3.6E-17 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_3155 d10d470487ba26daa9d64c4423209de1 192 SUPERFAMILY SSF88946 2 108 4.24E-30 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Patl_3155 d10d470487ba26daa9d64c4423209de1 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 190 3.6E-98 T 11-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_0617 e6ff85234a013d6ef08091bd11b3cb93 681 SMART SM00490 253 334 3.1E-27 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_0617 e6ff85234a013d6ef08091bd11b3cb93 681 Gene3D G3DSA:1.10.10.10 538 681 2.3E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0617 e6ff85234a013d6ef08091bd11b3cb93 681 SUPERFAMILY SSF52540 69 349 2.97E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0617 e6ff85234a013d6ef08091bd11b3cb93 681 Pfam PF00271 Helicase conserved C-terminal domain 227 333 6.1E-17 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_0617 e6ff85234a013d6ef08091bd11b3cb93 681 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 351 1.1E-109 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Patl_0617 e6ff85234a013d6ef08091bd11b3cb93 681 Pfam PF16124 RecQ zinc-binding 547 593 1.1E-5 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Patl_0617 e6ff85234a013d6ef08091bd11b3cb93 681 Gene3D G3DSA:3.40.50.300 212 402 3.6E-46 T 11-10-2018 Patl_0617 e6ff85234a013d6ef08091bd11b3cb93 681 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 143 152 - T 11-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site Patl_0617 e6ff85234a013d6ef08091bd11b3cb93 681 Pfam PF00270 DEAD/DEAH box helicase 32 191 2.6E-16 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Patl_0617 e6ff85234a013d6ef08091bd11b3cb93 681 Gene3D G3DSA:3.40.50.300 6 210 2.2E-65 T 11-10-2018 Patl_0617 e6ff85234a013d6ef08091bd11b3cb93 681 SMART SM00487 24 220 8.2E-26 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_0055 0b9c6024d716267d1f2195f9fd7226b3 239 Gene3D G3DSA:1.10.510.10 142 239 4.8E-16 T 11-10-2018 Patl_0055 0b9c6024d716267d1f2195f9fd7226b3 239 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 4 237 34.668 T 11-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 Patl_0055 0b9c6024d716267d1f2195f9fd7226b3 239 SUPERFAMILY SSF56112 46 199 6.34E-19 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Patl_0055 0b9c6024d716267d1f2195f9fd7226b3 239 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 32 235 4.3E-57 T 11-10-2018 Patl_0809 851b14da509f361e8168111af0f49280 1218 Pfam PF00593 TonB dependent receptor 777 1217 1.5E-29 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0809 851b14da509f361e8168111af0f49280 1218 Pfam PF00593 TonB dependent receptor 518 709 5.3E-4 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0809 851b14da509f361e8168111af0f49280 1218 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 53 1190 1.7E-148 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor Patl_0809 851b14da509f361e8168111af0f49280 1218 SUPERFAMILY SSF56935 56 1218 1.14E-78 T 11-10-2018 Patl_0809 851b14da509f361e8168111af0f49280 1218 Gene3D G3DSA:2.170.130.10 43 188 1.8E-13 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_0809 851b14da509f361e8168111af0f49280 1218 Pfam PF07715 TonB-dependent Receptor Plug Domain 80 183 1.0E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 Gene3D G3DSA:1.25.40.10 597 744 2.0E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 SMART SM00028 772 805 410.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 SMART SM00028 461 494 34.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 SMART SM00028 192 225 34.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 SMART SM00028 59 92 32.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 SMART SM00028 362 395 68.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 SMART SM00028 226 259 430.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 SMART SM00028 25 58 3.4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 SMART SM00028 840 873 33.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 SMART SM00028 294 327 230.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 SMART SM00028 603 636 15.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 SMART SM00028 637 670 480.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 SMART SM00028 806 839 85.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 SUPERFAMILY SSF48452 533 644 1.42E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 Gene3D G3DSA:1.25.40.10 770 846 2.0E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 SUPERFAMILY SSF48452 608 899 3.29E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 Gene3D G3DSA:1.25.40.10 847 917 1.4E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 7 898 2.7E-134 T 11-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 Gene3D G3DSA:1.25.40.10 29 107 9.4E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 Pfam PF13432 Tetratricopeptide repeat 470 521 0.0017 T 11-10-2018 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 Pfam PF13432 Tetratricopeptide repeat 31 88 3.2E-4 T 11-10-2018 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 Pfam PF14559 Tetratricopeptide repeat 850 899 1.3E-6 T 11-10-2018 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 Pfam PF14559 Tetratricopeptide repeat 205 269 5.1E-8 T 11-10-2018 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 Gene3D G3DSA:1.25.40.10 116 351 1.5E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 Gene3D G3DSA:1.25.40.10 352 596 5.8E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1201 80a91a753ec5ca0e7f98fdea526a7e52 918 SUPERFAMILY SSF48452 35 522 1.75E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0814 479deaa95a115a9170757157db5044d7 472 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 24 3.6E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Patl_0814 479deaa95a115a9170757157db5044d7 472 SUPERFAMILY SSF53649 288 456 2.62E-18 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_0814 479deaa95a115a9170757157db5044d7 472 Pfam PF07394 Protein of unknown function (DUF1501) 50 470 4.0E-152 T 11-10-2018 IPR010869 Protein of unknown function DUF1501 Patl_4299 c890dea514eae615dc4f0c349edfecd7 156 Gene3D G3DSA:1.20.5.620 62 122 5.4E-21 T 11-10-2018 Patl_4299 c890dea514eae615dc4f0c349edfecd7 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 11 156 2.5E-55 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 Patl_4299 c890dea514eae615dc4f0c349edfecd7 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 3.0E-38 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Patl_4299 c890dea514eae615dc4f0c349edfecd7 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.941 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Patl_4299 c890dea514eae615dc4f0c349edfecd7 156 SUPERFAMILY SSF81573 63 121 1.26E-15 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Patl_3323 4c0edaa1aa6fadb541024a3e8c120da2 509 SUPERFAMILY SSF53067 143 317 6.48E-45 T 11-10-2018 Patl_3323 4c0edaa1aa6fadb541024a3e8c120da2 509 PIRSF PIRSF001267 11 509 2.5E-185 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 Patl_3323 4c0edaa1aa6fadb541024a3e8c120da2 509 SUPERFAMILY SSF109604 321 506 2.32E-49 T 11-10-2018 Patl_3323 4c0edaa1aa6fadb541024a3e8c120da2 509 SUPERFAMILY SSF53067 19 138 3.76E-35 T 11-10-2018 Patl_3323 4c0edaa1aa6fadb541024a3e8c120da2 509 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 18 314 4.8E-103 T 11-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 Patl_3323 4c0edaa1aa6fadb541024a3e8c120da2 509 Gene3D G3DSA:1.10.3210.10 318 509 6.0E-61 T 11-10-2018 Patl_3323 4c0edaa1aa6fadb541024a3e8c120da2 509 Gene3D G3DSA:3.30.420.150 123 303 7.9E-89 T 11-10-2018 Patl_3323 4c0edaa1aa6fadb541024a3e8c120da2 509 Gene3D G3DSA:3.30.420.40 20 311 7.9E-89 T 11-10-2018 Patl_3323 4c0edaa1aa6fadb541024a3e8c120da2 509 Pfam PF02541 Ppx/GppA phosphatase family 32 315 4.6E-79 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Patl_0428 566458ef76bdc8a82d95839580c1785a 107 SUPERFAMILY SSF54862 3 101 8.63E-26 T 11-10-2018 Patl_0428 566458ef76bdc8a82d95839580c1785a 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 4.6E-14 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Patl_0428 566458ef76bdc8a82d95839580c1785a 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 4.6E-14 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Patl_0428 566458ef76bdc8a82d95839580c1785a 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 4.6E-14 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 Patl_0428 566458ef76bdc8a82d95839580c1785a 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 106 6.0E-19 T 11-10-2018 IPR022569 Ferredoxin, C-terminal Patl_0428 566458ef76bdc8a82d95839580c1785a 107 Gene3D G3DSA:3.30.70.20 2 99 2.4E-28 T 11-10-2018 Patl_0428 566458ef76bdc8a82d95839580c1785a 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Patl_0428 566458ef76bdc8a82d95839580c1785a 107 Pfam PF00037 4Fe-4S binding domain 34 55 6.3E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Patl_2406 01a08d52b88d66dc58abaffb306560c0 247 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_2406 01a08d52b88d66dc58abaffb306560c0 247 SMART SM00382 30 217 5.3E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2406 01a08d52b88d66dc58abaffb306560c0 247 SUPERFAMILY SSF52540 1 223 1.02E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2406 01a08d52b88d66dc58abaffb306560c0 247 Gene3D G3DSA:3.40.50.300 1 239 1.6E-64 T 11-10-2018 Patl_2406 01a08d52b88d66dc58abaffb306560c0 247 Pfam PF00005 ABC transporter 21 169 6.8E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_3979 e29605e2d0a9721d3004e37ad109fd0b 432 SUPERFAMILY SSF52540 198 370 1.52E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3979 e29605e2d0a9721d3004e37ad109fd0b 432 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 360 1.3E-155 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Patl_3979 e29605e2d0a9721d3004e37ad109fd0b 432 Gene3D G3DSA:3.40.50.300 197 371 1.4E-38 T 11-10-2018 Patl_3979 e29605e2d0a9721d3004e37ad109fd0b 432 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.748 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Patl_3979 e29605e2d0a9721d3004e37ad109fd0b 432 SUPERFAMILY SSF54980 365 420 1.87E-14 T 11-10-2018 IPR035647 EF-G domain III/V-like Patl_3979 e29605e2d0a9721d3004e37ad109fd0b 432 PIRSF PIRSF006809 3 420 4.0E-147 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 Patl_3979 e29605e2d0a9721d3004e37ad109fd0b 432 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 2.1E-31 T 11-10-2018 IPR025121 GTPase HflX, N-terminal Patl_3979 e29605e2d0a9721d3004e37ad109fd0b 432 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 3.8E-28 T 11-10-2018 IPR032305 GTP-binding protein, middle domain Patl_3979 e29605e2d0a9721d3004e37ad109fd0b 432 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 3.8E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_3979 e29605e2d0a9721d3004e37ad109fd0b 432 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 3.8E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_3979 e29605e2d0a9721d3004e37ad109fd0b 432 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 3.8E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_3979 e29605e2d0a9721d3004e37ad109fd0b 432 Pfam PF01926 50S ribosome-binding GTPase 200 318 5.4E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_3979 e29605e2d0a9721d3004e37ad109fd0b 432 Gene3D G3DSA:3.40.50.11060 18 138 1.1E-37 T 11-10-2018 Patl_3265 0db2e89ee447033a0690f18eed7413c7 543 Hamap MF_01227 CTP synthase [pyrG]. 2 539 51.123 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Patl_3265 0db2e89ee447033a0690f18eed7413c7 543 Pfam PF00117 Glutamine amidotransferase class-I 300 534 8.5E-59 T 11-10-2018 IPR017926 Glutamine amidotransferase Patl_3265 0db2e89ee447033a0690f18eed7413c7 543 Gene3D G3DSA:3.40.50.880 286 543 6.9E-103 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_3265 0db2e89ee447033a0690f18eed7413c7 543 SUPERFAMILY SSF52540 1 268 1.01E-121 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3265 0db2e89ee447033a0690f18eed7413c7 543 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 1.6E-256 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Patl_3265 0db2e89ee447033a0690f18eed7413c7 543 SUPERFAMILY SSF52317 288 540 4.16E-87 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_3265 0db2e89ee447033a0690f18eed7413c7 543 Pfam PF06418 CTP synthase N-terminus 4 265 1.9E-125 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Patl_3265 0db2e89ee447033a0690f18eed7413c7 543 Gene3D G3DSA:3.40.50.300 1 284 6.3E-133 T 11-10-2018 Patl_3036 634f22a724cf7d2c2e541694afea71b8 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.0E-14 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Patl_3036 634f22a724cf7d2c2e541694afea71b8 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.0E-14 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Patl_3036 634f22a724cf7d2c2e541694afea71b8 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.0E-14 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Patl_3036 634f22a724cf7d2c2e541694afea71b8 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.2E-24 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Patl_3036 634f22a724cf7d2c2e541694afea71b8 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 6.0E-28 T 11-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 Patl_3036 634f22a724cf7d2c2e541694afea71b8 89 PIRSF PIRSF004669 1 89 2.2E-26 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Patl_1227 1e87c962fc8bad7a59b417ceb5a08bac 346 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 342 46.107 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Patl_1227 1e87c962fc8bad7a59b417ceb5a08bac 346 Gene3D G3DSA:2.40.10.240 62 159 6.2E-116 T 11-10-2018 Patl_1227 1e87c962fc8bad7a59b417ceb5a08bac 346 SUPERFAMILY SSF111337 1 341 7.06E-133 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Patl_1227 1e87c962fc8bad7a59b417ceb5a08bac 346 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 341 9.2E-150 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Patl_1227 1e87c962fc8bad7a59b417ceb5a08bac 346 Pfam PF02547 Queuosine biosynthesis protein 3 341 2.5E-131 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Patl_1227 1e87c962fc8bad7a59b417ceb5a08bac 346 Gene3D G3DSA:3.40.1780.10 14 341 6.2E-116 T 11-10-2018 Patl_4075 629b3f04106e9b07212ca6976264748f 232 Pfam PF04340 Protein of unknown function, DUF484 22 227 1.3E-43 T 11-10-2018 IPR007435 Protein of unknown function DUF484 Patl_4075 629b3f04106e9b07212ca6976264748f 232 Gene3D G3DSA:3.30.450.40 59 230 1.3E-35 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_1764 8a69635403a9e923d7e919d5827dd39b 344 Gene3D G3DSA:3.40.50.1580 78 321 3.8E-12 T 11-10-2018 Patl_1764 8a69635403a9e923d7e919d5827dd39b 344 Pfam PF06516 Purine nucleoside permease (NUP) 40 340 3.5E-77 T 11-10-2018 IPR009486 Purine nucleoside permease GO:0055085 Patl_1764 8a69635403a9e923d7e919d5827dd39b 344 SUPERFAMILY SSF53167 86 304 1.36E-7 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Patl_1764 8a69635403a9e923d7e919d5827dd39b 344 PIRSF PIRSF013171 1 344 1.1E-57 T 11-10-2018 IPR009486 Purine nucleoside permease GO:0055085 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 1.1E-21 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 2.3E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 2.3E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 2.3E-13 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 SUPERFAMILY SSF55957 357 446 5.76E-22 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 Gene3D G3DSA:3.40.120.10 174 362 2.9E-63 T 11-10-2018 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 SUPERFAMILY SSF53738 156 257 2.47E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 444 46.895 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 136 2.7E-43 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 367 3.5E-31 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 Gene3D G3DSA:3.40.120.10 3 154 7.1E-48 T 11-10-2018 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 Gene3D G3DSA:3.40.120.10 257 339 2.9E-63 T 11-10-2018 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 SUPERFAMILY SSF53738 258 365 2.94E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 9.3E-13 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 442 6.1E-189 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 Gene3D G3DSA:3.30.310.50 370 447 5.6E-24 T 11-10-2018 Patl_1573 d373389fd5fd6c10bee65b96dd69b153 447 SUPERFAMILY SSF53738 2 181 5.1E-49 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_2417 c17ec0a46e79ca9966fe8c175e11dc98 466 Pfam PF13379 NMT1-like family 42 320 5.0E-108 T 11-10-2018 Patl_2417 c17ec0a46e79ca9966fe8c175e11dc98 466 Gene3D G3DSA:3.40.190.10 48 444 5.2E-142 T 11-10-2018 Patl_2417 c17ec0a46e79ca9966fe8c175e11dc98 466 SUPERFAMILY SSF53850 47 347 6.76E-20 T 11-10-2018 Patl_2417 c17ec0a46e79ca9966fe8c175e11dc98 466 Gene3D G3DSA:3.40.190.10 133 449 5.2E-142 T 11-10-2018 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 Pfam PF01588 Putative tRNA binding domain 580 672 2.4E-24 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 4.0E-22 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 383 394 4.0E-22 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 4.0E-22 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 4.0E-22 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 4.0E-22 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 290 305 4.0E-22 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 Gene3D G3DSA:2.40.50.140 564 675 1.3E-34 T 11-10-2018 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 Gene3D G3DSA:1.10.730.10 388 525 3.0E-34 T 11-10-2018 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 544 40.197 T 11-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 Gene3D G3DSA:3.40.50.620 8 383 3.5E-152 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 SUPERFAMILY SSF50249 569 674 6.61E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 Pfam PF08264 Anticodon-binding domain of tRNA 416 502 8.3E-7 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 SUPERFAMILY SSF47323 389 545 2.43E-43 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 Pfam PF09334 tRNA synthetases class I (M) 8 395 2.8E-155 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 SUPERFAMILY SSF52374 5 386 4.29E-101 T 11-10-2018 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 SUPERFAMILY SSF57770 142 176 6.02E-12 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 Gene3D G3DSA:2.20.28.20 142 176 3.5E-152 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 533 2.2E-183 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Patl_1897 c8b527b58991e9cfc1b52dce7c503835 675 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 556 675 3.3E-44 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 Gene3D G3DSA:3.30.565.10 491 649 1.5E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 SMART SM00448 681 792 6.4E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 SUPERFAMILY SSF52172 681 805 3.7E-35 T 11-10-2018 IPR011006 CheY-like superfamily Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 Gene3D G3DSA:3.40.50.2300 670 800 1.7E-32 T 11-10-2018 Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 Pfam PF07695 7TM diverse intracellular signalling 179 377 1.0E-27 T 11-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 SUPERFAMILY SSF55874 479 650 7.6E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 Pfam PF00512 His Kinase A (phospho-acceptor) domain 425 489 2.2E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 SUPERFAMILY SSF47226 804 894 3.27E-15 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 SUPERFAMILY SSF47384 411 491 1.71E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 538 645 9.0E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 SMART SM00388 424 490 2.9E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 Gene3D G3DSA:1.10.287.130 388 488 1.3E-26 T 11-10-2018 Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 626 8.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 587 8.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 PRINTS PR00344 Bacterial sensor protein C-terminal signature 632 645 8.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 601 8.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 SMART SM00387 537 648 2.3E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 Pfam PF00072 Response regulator receiver domain 683 791 2.6E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 Pfam PF01627 Hpt domain 814 880 8.4E-11 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Patl_4293 d5e37cf048a3a2383d76aff1514582b2 1011 Gene3D G3DSA:1.20.120.160 801 895 1.0E-13 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Patl_1996 4933f8c3b2a91cd91b401965610efdaa 874 Gene3D G3DSA:1.25.50.10 547 870 1.3E-103 T 11-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily Patl_1996 4933f8c3b2a91cd91b401965610efdaa 874 SUPERFAMILY SSF63737 11 194 7.59E-42 T 11-10-2018 Patl_1996 4933f8c3b2a91cd91b401965610efdaa 874 SUPERFAMILY SSF55486 205 451 2.01E-72 T 11-10-2018 Patl_1996 4933f8c3b2a91cd91b401965610efdaa 874 Gene3D G3DSA:2.60.40.1840 445 546 3.1E-26 T 11-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily Patl_1996 4933f8c3b2a91cd91b401965610efdaa 874 Pfam PF01433 Peptidase family M1 domain 209 437 1.3E-57 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_1996 4933f8c3b2a91cd91b401965610efdaa 874 Gene3D G3DSA:1.10.1740.60 196 280 7.1E-38 T 11-10-2018 Patl_1996 4933f8c3b2a91cd91b401965610efdaa 874 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 445 545 1.3E-27 T 11-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold Patl_1996 4933f8c3b2a91cd91b401965610efdaa 874 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 259 269 4.8E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_1996 4933f8c3b2a91cd91b401965610efdaa 874 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 177 192 4.8E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_1996 4933f8c3b2a91cd91b401965610efdaa 874 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 314 326 4.8E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_1996 4933f8c3b2a91cd91b401965610efdaa 874 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 127 142 4.8E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_1996 4933f8c3b2a91cd91b401965610efdaa 874 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 295 310 4.8E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_1996 4933f8c3b2a91cd91b401965610efdaa 874 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 550 870 1.9E-106 T 11-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal Patl_1996 4933f8c3b2a91cd91b401965610efdaa 874 Gene3D G3DSA:1.10.390.10 281 444 1.8E-64 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily Patl_1996 4933f8c3b2a91cd91b401965610efdaa 874 Gene3D G3DSA:2.60.40.1730 16 195 2.2E-69 T 11-10-2018 Patl_1996 4933f8c3b2a91cd91b401965610efdaa 874 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 869 0.0 T 11-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 Patl_2877 aed74374e3a4d26c3750080cf8144a93 321 PRINTS PR00069 Aldo-keto reductase signature 30 54 7.9E-48 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Patl_2877 aed74374e3a4d26c3750080cf8144a93 321 PRINTS PR00069 Aldo-keto reductase signature 149 166 7.9E-48 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Patl_2877 aed74374e3a4d26c3750080cf8144a93 321 PRINTS PR00069 Aldo-keto reductase signature 232 256 7.9E-48 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Patl_2877 aed74374e3a4d26c3750080cf8144a93 321 PRINTS PR00069 Aldo-keto reductase signature 90 108 7.9E-48 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Patl_2877 aed74374e3a4d26c3750080cf8144a93 321 PRINTS PR00069 Aldo-keto reductase signature 183 212 7.9E-48 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Patl_2877 aed74374e3a4d26c3750080cf8144a93 321 Gene3D G3DSA:3.20.20.100 2 314 1.2E-113 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Patl_2877 aed74374e3a4d26c3750080cf8144a93 321 Pfam PF00248 Aldo/keto reductase family 11 296 6.8E-44 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain Patl_2877 aed74374e3a4d26c3750080cf8144a93 321 PIRSF PIRSF000097 2 319 1.1E-111 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Patl_2877 aed74374e3a4d26c3750080cf8144a93 321 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 265 280 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Patl_2877 aed74374e3a4d26c3750080cf8144a93 321 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 34 51 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Patl_2877 aed74374e3a4d26c3750080cf8144a93 321 SUPERFAMILY SSF51430 6 305 5.24E-87 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Patl_2877 aed74374e3a4d26c3750080cf8144a93 321 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 149 166 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 Gene3D G3DSA:3.30.450.20 23 124 3.2E-10 T 11-10-2018 Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 SUPERFAMILY SSF55073 263 421 7.53E-49 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 417 1.3E-42 T 11-10-2018 IPR000160 GGDEF domain Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 Gene3D G3DSA:3.30.70.270 253 430 1.5E-60 T 11-10-2018 Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 SUPERFAMILY SSF55785 125 245 2.97E-14 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 SMART SM00052 429 675 2.9E-113 T 11-10-2018 IPR001633 EAL domain Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 Pfam PF00990 Diguanylate cyclase, GGDEF domain 258 415 2.7E-48 T 11-10-2018 IPR000160 GGDEF domain Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 Pfam PF08447 PAS fold 33 113 2.0E-8 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 138 252 3.0E-8 T 11-10-2018 IPR000014 PAS domain Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 SUPERFAMILY SSF55785 27 132 2.09E-11 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 SMART SM00091 11 78 0.028 T 11-10-2018 IPR000014 PAS domain Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 SMART SM00091 138 204 0.75 T 11-10-2018 IPR000014 PAS domain Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 Pfam PF08448 PAS fold 144 248 5.1E-9 T 11-10-2018 IPR013656 PAS fold-4 Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 Gene3D G3DSA:3.20.20.450 431 680 5.7E-99 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 SUPERFAMILY SSF141868 434 680 6.54E-91 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 Pfam PF00563 EAL domain 435 670 2.7E-79 T 11-10-2018 IPR001633 EAL domain Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 SMART SM00267 247 419 4.5E-65 T 11-10-2018 IPR000160 GGDEF domain Patl_3437 d1cf72b9356ade6553b434e8bacf1669 684 Gene3D G3DSA:3.30.450.20 125 252 8.4E-15 T 11-10-2018 Patl_0544 95cdd2035b560aa88bb39b41e74ee488 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 1.3E-20 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Patl_0544 95cdd2035b560aa88bb39b41e74ee488 114 Gene3D G3DSA:2.60.300.12 9 104 3.4E-34 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Patl_0544 95cdd2035b560aa88bb39b41e74ee488 114 SUPERFAMILY SSF89360 5 100 5.36E-31 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Patl_0544 95cdd2035b560aa88bb39b41e74ee488 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 114 1.8E-38 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Patl_0544 95cdd2035b560aa88bb39b41e74ee488 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.069 T 11-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 Patl_0544 95cdd2035b560aa88bb39b41e74ee488 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Patl_2996 6c9ed0f83fb677e7afb9338592d55121 156 Gene3D G3DSA:3.30.70.920 57 141 3.8E-26 T 11-10-2018 Patl_2996 6c9ed0f83fb677e7afb9338592d55121 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 3.7E-18 T 11-10-2018 Patl_2996 6c9ed0f83fb677e7afb9338592d55121 156 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Patl_2996 6c9ed0f83fb677e7afb9338592d55121 156 Pfam PF01037 Lrp/AsnC ligand binding domain 72 144 2.0E-20 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Patl_2996 6c9ed0f83fb677e7afb9338592d55121 156 SUPERFAMILY SSF46785 3 62 2.23E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2996 6c9ed0f83fb677e7afb9338592d55121 156 SUPERFAMILY SSF54909 64 153 5.5E-21 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_2996 6c9ed0f83fb677e7afb9338592d55121 156 Gene3D G3DSA:1.10.10.10 5 56 2.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2996 6c9ed0f83fb677e7afb9338592d55121 156 SMART SM00344 4 113 2.6E-44 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Patl_2996 6c9ed0f83fb677e7afb9338592d55121 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.6E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_2996 6c9ed0f83fb677e7afb9338592d55121 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.6E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_2996 6c9ed0f83fb677e7afb9338592d55121 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.6E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_2005 70c6f7dff56b26f0c00b1508cd1ca499 701 Gene3D G3DSA:3.40.50.150 483 700 9.6E-79 T 11-10-2018 Patl_2005 70c6f7dff56b26f0c00b1508cd1ca499 701 Pfam PF01170 Putative RNA methylase family UPF0020 163 373 4.2E-50 T 11-10-2018 IPR000241 Putative RNA methylase domain Patl_2005 70c6f7dff56b26f0c00b1508cd1ca499 701 SUPERFAMILY SSF53335 143 373 3.65E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_2005 70c6f7dff56b26f0c00b1508cd1ca499 701 Gene3D G3DSA:3.30.2130.30 6 254 2.0E-125 T 11-10-2018 Patl_2005 70c6f7dff56b26f0c00b1508cd1ca499 701 Gene3D G3DSA:3.30.750.80 391 482 2.1E-36 T 11-10-2018 Patl_2005 70c6f7dff56b26f0c00b1508cd1ca499 701 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 304 310 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Patl_2005 70c6f7dff56b26f0c00b1508cd1ca499 701 SUPERFAMILY SSF53335 394 695 1.69E-72 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_2005 70c6f7dff56b26f0c00b1508cd1ca499 701 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 700 31.587 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 Patl_2005 70c6f7dff56b26f0c00b1508cd1ca499 701 Pfam PF02926 THUMP domain 40 151 2.6E-8 T 11-10-2018 IPR004114 THUMP domain GO:0003723 Patl_2005 70c6f7dff56b26f0c00b1508cd1ca499 701 PIRSF PIRSF037618 1 701 1.3E-302 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 Patl_2005 70c6f7dff56b26f0c00b1508cd1ca499 701 SMART SM00981 57 155 2.8E-13 T 11-10-2018 IPR004114 THUMP domain GO:0003723 Patl_2005 70c6f7dff56b26f0c00b1508cd1ca499 701 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 468 653 5.6E-27 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Patl_2005 70c6f7dff56b26f0c00b1508cd1ca499 701 Gene3D G3DSA:3.40.50.150 170 370 2.0E-125 T 11-10-2018 Patl_1913 5167da41f7dc133edbcc6483946582a8 549 Pfam PF13193 AMP-binding enzyme C-terminal domain 456 530 6.6E-17 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Patl_1913 5167da41f7dc133edbcc6483946582a8 549 Gene3D G3DSA:3.30.300.310 442 544 2.5E-29 T 11-10-2018 Patl_1913 5167da41f7dc133edbcc6483946582a8 549 Pfam PF00501 AMP-binding enzyme 19 446 1.4E-87 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Patl_1913 5167da41f7dc133edbcc6483946582a8 549 SUPERFAMILY SSF56801 11 543 2.09E-131 T 11-10-2018 Patl_1913 5167da41f7dc133edbcc6483946582a8 549 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 11-10-2018 IPR020845 AMP-binding, conserved site Patl_1913 5167da41f7dc133edbcc6483946582a8 549 Gene3D G3DSA:3.40.50.12780 1 441 3.8E-118 T 11-10-2018 Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 626 737 1.3E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 Gene3D G3DSA:1.10.287.130 480 576 1.8E-24 T 11-10-2018 Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 Gene3D G3DSA:3.30.450.20 97 230 9.3E-36 T 11-10-2018 Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 SMART SM00091 369 434 6.8E-6 T 11-10-2018 IPR000014 PAS domain Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 SUPERFAMILY SSF47384 502 579 5.49E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 SMART SM00388 513 578 5.1E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 Pfam PF00989 PAS fold 372 479 9.2E-14 T 11-10-2018 IPR013767 PAS fold GO:0006355 Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 SUPERFAMILY SSF52172 905 1032 1.38E-35 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 Gene3D G3DSA:3.30.565.10 577 741 5.0E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 SUPERFAMILY SSF55874 567 736 7.99E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 SMART SM00448 908 1029 1.1E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 SUPERFAMILY SSF55785 362 480 3.14E-13 T 11-10-2018 IPR035965 PAS domain superfamily Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 Gene3D G3DSA:3.40.50.12740 907 1041 4.4E-39 T 11-10-2018 Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 373 488 8.3E-12 T 11-10-2018 IPR000014 PAS domain Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 PRINTS PR00344 Bacterial sensor protein C-terminal signature 683 693 1.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 PRINTS PR00344 Bacterial sensor protein C-terminal signature 700 718 1.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 PRINTS PR00344 Bacterial sensor protein C-terminal signature 724 737 1.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 PRINTS PR00344 Bacterial sensor protein C-terminal signature 665 679 1.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 Pfam PF00072 Response regulator receiver domain 910 1029 2.0E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 Pfam PF00512 His Kinase A (phospho-acceptor) domain 514 578 5.5E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 Pfam PF02743 Cache domain 41 263 1.7E-14 T 11-10-2018 IPR033479 Double Cache domain 1 Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 Gene3D G3DSA:3.30.450.20 365 479 3.5E-16 T 11-10-2018 Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 SUPERFAMILY SSF103190 47 230 5.49E-41 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Patl_2104 022be9c38ac0f3e3f26711a7b15f25de 1042 SMART SM00387 625 740 8.2E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1989 b241eefe5d4a4cef39bf4ceee92b2b5e 155 Pfam PF01322 Cytochrome C' 33 153 5.7E-32 T 11-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 Patl_1989 b241eefe5d4a4cef39bf4ceee92b2b5e 155 PIRSF PIRSF000027 8 155 6.1E-34 T 11-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 Patl_1989 b241eefe5d4a4cef39bf4ceee92b2b5e 155 Gene3D G3DSA:1.20.120.10 26 155 6.0E-33 T 11-10-2018 Patl_1989 b241eefe5d4a4cef39bf4ceee92b2b5e 155 SUPERFAMILY SSF47175 30 153 1.62E-33 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 Patl_1571 50a8e9c38a0b1aabfbed9ff9d95c6234 656 Gene3D G3DSA:3.40.50.300 143 328 1.4E-70 T 11-10-2018 Patl_1571 50a8e9c38a0b1aabfbed9ff9d95c6234 656 SUPERFAMILY SSF140990 408 609 2.09E-74 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Patl_1571 50a8e9c38a0b1aabfbed9ff9d95c6234 656 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 194 326 2.7E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Patl_1571 50a8e9c38a0b1aabfbed9ff9d95c6234 656 ProSitePatterns PS00674 AAA-protein family signature. 297 315 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Patl_1571 50a8e9c38a0b1aabfbed9ff9d95c6234 656 Pfam PF01434 Peptidase family M41 388 597 3.9E-81 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Patl_1571 50a8e9c38a0b1aabfbed9ff9d95c6234 656 Gene3D G3DSA:1.10.8.60 329 402 7.7E-29 T 11-10-2018 Patl_1571 50a8e9c38a0b1aabfbed9ff9d95c6234 656 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 599 1.1E-242 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Patl_1571 50a8e9c38a0b1aabfbed9ff9d95c6234 656 SUPERFAMILY SSF52540 151 397 7.19E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1571 50a8e9c38a0b1aabfbed9ff9d95c6234 656 Gene3D G3DSA:1.20.58.760 403 606 1.4E-71 T 11-10-2018 Patl_1571 50a8e9c38a0b1aabfbed9ff9d95c6234 656 Gene3D G3DSA:2.40.50.920 27 106 7.4E-23 T 11-10-2018 Patl_1571 50a8e9c38a0b1aabfbed9ff9d95c6234 656 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 615 37.398 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Patl_1571 50a8e9c38a0b1aabfbed9ff9d95c6234 656 Pfam PF06480 FtsH Extracellular 8 93 9.7E-12 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 Patl_1571 50a8e9c38a0b1aabfbed9ff9d95c6234 656 SMART SM00382 190 329 1.6E-26 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2976 eefbc5904e47d10b28aa237299e93b1b 228 Pfam PF09603 Fibrobacter succinogenes major domain (Fib_succ_major) 42 227 3.9E-44 T 11-10-2018 IPR011871 Fibrobacter succinogenes major paralogous domain Patl_2976 eefbc5904e47d10b28aa237299e93b1b 228 TIGRFAM TIGR02145 Fib_succ_major: fibrobacter succinogenes major paralogous domain 35 228 9.7E-33 T 11-10-2018 IPR011871 Fibrobacter succinogenes major paralogous domain Patl_3077 e476c040fce42f86ecab081718af381f 358 SUPERFAMILY SSF53756 11 341 3.11E-6 T 11-10-2018 Patl_1043 2f5d017f9e6298f2eb5ea2c4c075d5c0 200 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 1.6E-49 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Patl_1043 2f5d017f9e6298f2eb5ea2c4c075d5c0 200 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 1.4E-71 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Patl_1043 2f5d017f9e6298f2eb5ea2c4c075d5c0 200 SMART SM01207 10 185 9.8E-81 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Patl_1043 2f5d017f9e6298f2eb5ea2c4c075d5c0 200 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.95 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Patl_4004 bf59542236a2622c808bf699d1344509 211 Gene3D G3DSA:3.40.50.20 2 86 4.3E-21 T 11-10-2018 Patl_4004 bf59542236a2622c808bf699d1344509 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 158 189 1.3E-4 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_4004 bf59542236a2622c808bf699d1344509 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 155 0.0015 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_4004 bf59542236a2622c808bf699d1344509 211 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 165 193 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Patl_4004 bf59542236a2622c808bf699d1344509 211 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 4 205 3.8E-69 T 11-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like Patl_4004 bf59542236a2622c808bf699d1344509 211 SUPERFAMILY SSF51161 3 207 1.11E-42 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Patl_4004 bf59542236a2622c808bf699d1344509 211 Gene3D G3DSA:2.160.10.10 87 211 3.0E-27 T 11-10-2018 Patl_3727 fd78079d07e5c00b49cb29fa8020c750 466 SUPERFAMILY SSF103473 17 465 1.24E-67 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_3727 fd78079d07e5c00b49cb29fa8020c750 466 ProSitePatterns PS00216 Sugar transport proteins signature 1. 317 334 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Patl_3727 fd78079d07e5c00b49cb29fa8020c750 466 Gene3D G3DSA:1.20.1250.20 4 466 9.7E-123 T 11-10-2018 Patl_3727 fd78079d07e5c00b49cb29fa8020c750 466 PRINTS PR00171 Sugar transporter signature 273 283 5.4E-25 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_3727 fd78079d07e5c00b49cb29fa8020c750 466 PRINTS PR00171 Sugar transporter signature 105 124 5.4E-25 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_3727 fd78079d07e5c00b49cb29fa8020c750 466 PRINTS PR00171 Sugar transporter signature 369 390 5.4E-25 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_3727 fd78079d07e5c00b49cb29fa8020c750 466 PRINTS PR00171 Sugar transporter signature 22 32 5.4E-25 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_3727 fd78079d07e5c00b49cb29fa8020c750 466 PRINTS PR00171 Sugar transporter signature 392 404 5.4E-25 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_3727 fd78079d07e5c00b49cb29fa8020c750 466 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 3 464 9.7E-112 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_3727 fd78079d07e5c00b49cb29fa8020c750 466 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 85 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Patl_3727 fd78079d07e5c00b49cb29fa8020c750 466 ProSitePatterns PS00217 Sugar transport proteins signature 2. 110 135 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Patl_3727 fd78079d07e5c00b49cb29fa8020c750 466 Pfam PF00083 Sugar (and other) transporter 15 465 5.1E-112 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 901 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 Gene3D G3DSA:1.10.730.10 601 786 1.9E-57 T 11-10-2018 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 Gene3D G3DSA:3.40.50.620 2 194 7.8E-55 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 Gene3D G3DSA:3.40.50.620 332 598 2.7E-62 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 Gene3D G3DSA:1.10.287.380 847 918 1.0E-17 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 SUPERFAMILY SSF46589 854 918 1.52E-15 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 SUPERFAMILY SSF50677 188 339 3.14E-64 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 Pfam PF08264 Anticodon-binding domain of tRNA 642 795 1.7E-44 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 PRINTS PR00986 Valyl-tRNA synthetase signature 33 44 6.7E-36 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 PRINTS PR00986 Valyl-tRNA synthetase signature 474 492 6.7E-36 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 PRINTS PR00986 Valyl-tRNA synthetase signature 443 464 6.7E-36 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 PRINTS PR00986 Valyl-tRNA synthetase signature 343 356 6.7E-36 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 PRINTS PR00986 Valyl-tRNA synthetase signature 227 244 6.7E-36 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 13 599 1.7E-218 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 854 914 5.0E-16 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 SUPERFAMILY SSF52374 1 609 3.13E-136 T 11-10-2018 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 919 16.215 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 Gene3D G3DSA:3.90.740.10 195 331 1.6E-55 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Patl_3564 ed4822d98cabc2e949f92b2998d1f046 921 SUPERFAMILY SSF47323 610 869 9.72E-71 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_3663 1b762c3bb9ee6fe3e6948de653010388 722 SUPERFAMILY SSF53335 520 676 1.91E-20 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3663 1b762c3bb9ee6fe3e6948de653010388 722 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 479 721 8.1E-76 T 11-10-2018 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain Patl_3663 1b762c3bb9ee6fe3e6948de653010388 722 Pfam PF12867 DinB superfamily 44 177 7.9E-9 T 11-10-2018 IPR024775 DinB-like domain Patl_3663 1b762c3bb9ee6fe3e6948de653010388 722 Gene3D G3DSA:3.90.1580.10 200 475 3.6E-31 T 11-10-2018 Patl_3663 1b762c3bb9ee6fe3e6948de653010388 722 Pfam PF13847 Methyltransferase domain 522 670 2.7E-14 T 11-10-2018 IPR025714 Methyltransferase domain Patl_3663 1b762c3bb9ee6fe3e6948de653010388 722 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 23 464 7.2E-195 T 11-10-2018 IPR027577 5-histidylcysteine sulfoxide synthase Patl_3663 1b762c3bb9ee6fe3e6948de653010388 722 SUPERFAMILY SSF56436 212 465 1.04E-59 T 11-10-2018 IPR016187 C-type lectin fold Patl_3663 1b762c3bb9ee6fe3e6948de653010388 722 Pfam PF03781 Sulfatase-modifying factor enzyme 1 213 464 8.1E-30 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Patl_3663 1b762c3bb9ee6fe3e6948de653010388 722 Gene3D G3DSA:3.40.50.150 495 702 8.1E-22 T 11-10-2018 Patl_2995 fa341d58cdb8cbdc8d6099b62b623156 371 SUPERFAMILY SSF53223 9 167 3.01E-44 T 11-10-2018 Patl_2995 fa341d58cdb8cbdc8d6099b62b623156 371 SUPERFAMILY SSF51735 172 369 2.73E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2995 fa341d58cdb8cbdc8d6099b62b623156 371 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 176 225 1.5E-5 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Patl_2995 fa341d58cdb8cbdc8d6099b62b623156 371 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 243 365 4.7E-12 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Patl_2995 fa341d58cdb8cbdc8d6099b62b623156 371 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 96 109 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Patl_2995 fa341d58cdb8cbdc8d6099b62b623156 371 Gene3D G3DSA:3.40.50.720 156 362 2.1E-135 T 11-10-2018 Patl_2995 fa341d58cdb8cbdc8d6099b62b623156 371 SMART SM00839 171 371 6.5E-74 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Patl_2995 fa341d58cdb8cbdc8d6099b62b623156 371 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 36 153 9.8E-28 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Patl_2995 fa341d58cdb8cbdc8d6099b62b623156 371 PIRSF PIRSF000188 23 371 4.8E-142 T 11-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 Patl_2995 fa341d58cdb8cbdc8d6099b62b623156 371 Gene3D G3DSA:3.40.50.10860 33 369 2.1E-135 T 11-10-2018 Patl_0991 f71f7b075ee0f73b4a8fe57dcd2341e7 237 SUPERFAMILY SSF52343 105 235 6.55E-29 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_0991 f71f7b075ee0f73b4a8fe57dcd2341e7 237 Gene3D G3DSA:2.40.30.10 3 98 6.5E-21 T 11-10-2018 Patl_0991 f71f7b075ee0f73b4a8fe57dcd2341e7 237 Gene3D G3DSA:3.40.50.80 101 237 5.4E-23 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_0991 f71f7b075ee0f73b4a8fe57dcd2341e7 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 3.4E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Patl_0991 f71f7b075ee0f73b4a8fe57dcd2341e7 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 3.4E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Patl_0991 f71f7b075ee0f73b4a8fe57dcd2341e7 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 3.4E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Patl_0991 f71f7b075ee0f73b4a8fe57dcd2341e7 237 SUPERFAMILY SSF63380 4 97 2.2E-17 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Patl_0991 f71f7b075ee0f73b4a8fe57dcd2341e7 237 Pfam PF00175 Oxidoreductase NAD-binding domain 108 216 4.5E-20 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Patl_2255 fb4f74148198442626fee6c268bfbf3b 331 Pfam PF00248 Aldo/keto reductase family 16 308 2.8E-72 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain Patl_2255 fb4f74148198442626fee6c268bfbf3b 331 SUPERFAMILY SSF51430 1 315 3.8E-96 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Patl_2255 fb4f74148198442626fee6c268bfbf3b 331 Gene3D G3DSA:3.20.20.100 1 329 6.7E-115 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Patl_3673 a36a8e7017c7c508732c05db333277e6 296 SMART SM00342 210 293 1.5E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_3673 a36a8e7017c7c508732c05db333277e6 296 Gene3D G3DSA:1.10.10.60 189 296 2.0E-28 T 11-10-2018 Patl_3673 a36a8e7017c7c508732c05db333277e6 296 Pfam PF12833 Helix-turn-helix domain 216 292 9.6E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_3673 a36a8e7017c7c508732c05db333277e6 296 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 181 1.2E-35 T 11-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal Patl_3673 a36a8e7017c7c508732c05db333277e6 296 SUPERFAMILY SSF46689 246 292 4.21E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_3673 a36a8e7017c7c508732c05db333277e6 296 SUPERFAMILY SSF46689 193 244 1.43E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0418 85a184318e9100c55f71e0de864a234a 579 Gene3D G3DSA:3.30.70.330 495 567 4.1E-13 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Patl_0418 85a184318e9100c55f71e0de864a234a 579 Gene3D G3DSA:3.40.50.300 212 433 1.6E-50 T 11-10-2018 Patl_0418 85a184318e9100c55f71e0de864a234a 579 Pfam PF00270 DEAD/DEAH box helicase 31 197 9.3E-50 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Patl_0418 85a184318e9100c55f71e0de864a234a 579 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Patl_0418 85a184318e9100c55f71e0de864a234a 579 SMART SM00487 26 224 4.2E-63 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_0418 85a184318e9100c55f71e0de864a234a 579 SMART SM00490 260 341 1.3E-32 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_0418 85a184318e9100c55f71e0de864a234a 579 Pfam PF03880 DbpA RNA binding domain 495 565 1.4E-23 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Patl_0418 85a184318e9100c55f71e0de864a234a 579 SUPERFAMILY SSF52540 75 362 7.71E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0418 85a184318e9100c55f71e0de864a234a 579 Pfam PF00271 Helicase conserved C-terminal domain 233 341 4.6E-30 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_0418 85a184318e9100c55f71e0de864a234a 579 Gene3D G3DSA:3.40.50.300 2 211 4.9E-76 T 11-10-2018 Patl_0418 85a184318e9100c55f71e0de864a234a 579 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 567 44.595 T 11-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 Patl_3546 7bd50f1fca391caf643c00f1eaf122ab 518 Pfam PF08448 PAS fold 181 284 9.6E-11 T 11-10-2018 IPR013656 PAS fold-4 Patl_3546 7bd50f1fca391caf643c00f1eaf122ab 518 SMART SM00388 296 364 3.2E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3546 7bd50f1fca391caf643c00f1eaf122ab 518 Gene3D G3DSA:3.30.450.20 158 291 2.0E-12 T 11-10-2018 Patl_3546 7bd50f1fca391caf643c00f1eaf122ab 518 Gene3D G3DSA:3.30.565.10 368 514 4.8E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3546 7bd50f1fca391caf643c00f1eaf122ab 518 SMART SM00387 401 512 1.8E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3546 7bd50f1fca391caf643c00f1eaf122ab 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 509 1.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3546 7bd50f1fca391caf643c00f1eaf122ab 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 467 1.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3546 7bd50f1fca391caf643c00f1eaf122ab 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 453 1.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3546 7bd50f1fca391caf643c00f1eaf122ab 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 490 1.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3546 7bd50f1fca391caf643c00f1eaf122ab 518 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 176 288 6.1E-8 T 11-10-2018 IPR000014 PAS domain Patl_3546 7bd50f1fca391caf643c00f1eaf122ab 518 SUPERFAMILY SSF55874 372 511 3.14E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3546 7bd50f1fca391caf643c00f1eaf122ab 518 SUPERFAMILY SSF47384 285 363 5.69E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_3546 7bd50f1fca391caf643c00f1eaf122ab 518 Pfam PF00512 His Kinase A (phospho-acceptor) domain 297 362 2.3E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3546 7bd50f1fca391caf643c00f1eaf122ab 518 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 405 510 3.8E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3546 7bd50f1fca391caf643c00f1eaf122ab 518 SUPERFAMILY SSF55785 174 283 1.17E-10 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3546 7bd50f1fca391caf643c00f1eaf122ab 518 Gene3D G3DSA:1.10.287.130 292 367 1.1E-9 T 11-10-2018 Patl_0063 22b19c79a4abc46180831fc692850fe0 106 Pfam PF00581 Rhodanese-like domain 9 97 2.2E-17 T 11-10-2018 IPR001763 Rhodanese-like domain Patl_0063 22b19c79a4abc46180831fc692850fe0 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 30.404 T 11-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 Patl_0063 22b19c79a4abc46180831fc692850fe0 106 SMART SM00450 7 102 4.8E-24 T 11-10-2018 IPR001763 Rhodanese-like domain Patl_0063 22b19c79a4abc46180831fc692850fe0 106 Gene3D G3DSA:3.40.250.10 1 101 6.3E-30 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Patl_0063 22b19c79a4abc46180831fc692850fe0 106 SUPERFAMILY SSF52821 2 103 2.49E-30 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Patl_4094 c125261165ca3184160e1bf854684961 110 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 2 91 2.5E-18 T 11-10-2018 IPR000160 GGDEF domain Patl_4094 c125261165ca3184160e1bf854684961 110 Gene3D G3DSA:3.30.70.270 1 97 9.8E-25 T 11-10-2018 Patl_4094 c125261165ca3184160e1bf854684961 110 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1 89 2.5E-17 T 11-10-2018 IPR000160 GGDEF domain Patl_4094 c125261165ca3184160e1bf854684961 110 SUPERFAMILY SSF55073 2 90 5.57E-22 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3231 830e7b34df30590283796c61e38d7f86 396 Pfam PF00482 Type II secretion system (T2SS), protein F 64 186 1.4E-24 T 11-10-2018 IPR018076 Type II secretion system F domain Patl_3231 830e7b34df30590283796c61e38d7f86 396 Pfam PF00482 Type II secretion system (T2SS), protein F 267 386 5.2E-20 T 11-10-2018 IPR018076 Type II secretion system F domain Patl_3231 830e7b34df30590283796c61e38d7f86 396 Gene3D G3DSA:1.20.81.30 248 360 8.1E-18 T 11-10-2018 Patl_3231 830e7b34df30590283796c61e38d7f86 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 158 186 5.9E-9 T 11-10-2018 IPR003004 GspF/PilC family Patl_3231 830e7b34df30590283796c61e38d7f86 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 59 71 5.9E-9 T 11-10-2018 IPR003004 GspF/PilC family Patl_3231 830e7b34df30590283796c61e38d7f86 396 PRINTS PR00812 Bacterial general secretion pathway protein F signature 360 374 5.9E-9 T 11-10-2018 IPR003004 GspF/PilC family Patl_3231 830e7b34df30590283796c61e38d7f86 396 Gene3D G3DSA:1.20.81.30 49 165 1.6E-18 T 11-10-2018 Patl_2088 1af8833d8be98543a7eba9d5ff30813c 332 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 326 6.3E-28 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Patl_2088 1af8833d8be98543a7eba9d5ff30813c 332 SUPERFAMILY SSF52283 2 135 3.21E-38 T 11-10-2018 Patl_2088 1af8833d8be98543a7eba9d5ff30813c 332 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Patl_2088 1af8833d8be98543a7eba9d5ff30813c 332 Gene3D G3DSA:3.40.50.720 102 297 7.6E-136 T 11-10-2018 Patl_2088 1af8833d8be98543a7eba9d5ff30813c 332 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 8.9E-57 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Patl_2088 1af8833d8be98543a7eba9d5ff30813c 332 SUPERFAMILY SSF51735 102 298 1.9E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2088 1af8833d8be98543a7eba9d5ff30813c 332 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Patl_2088 1af8833d8be98543a7eba9d5ff30813c 332 Gene3D G3DSA:3.40.50.720 2 317 7.6E-136 T 11-10-2018 Patl_2073 2b1fc619d4deabd67525e68b5635d53b 479 Gene3D G3DSA:1.20.210.10 4 475 3.2E-203 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_2073 2b1fc619d4deabd67525e68b5635d53b 479 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_2073 2b1fc619d4deabd67525e68b5635d53b 479 SUPERFAMILY SSF81442 11 465 1.96E-120 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_2073 2b1fc619d4deabd67525e68b5635d53b 479 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 14 444 3.2E-110 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_2073 2b1fc619d4deabd67525e68b5635d53b 479 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 10 468 2.2E-224 T 11-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Patl_0202 8c37ba6cec13df57ed532fc9c282690a 386 ProSitePatterns PS00099 Thiolases active site. 367 380 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 Patl_0202 8c37ba6cec13df57ed532fc9c282690a 386 ProSitePatterns PS00737 Thiolases signature 2. 332 348 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Patl_0202 8c37ba6cec13df57ed532fc9c282690a 386 Pfam PF02803 Thiolase, C-terminal domain 261 385 5.6E-48 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Patl_0202 8c37ba6cec13df57ed532fc9c282690a 386 Gene3D G3DSA:3.40.47.10 134 380 7.2E-144 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_0202 8c37ba6cec13df57ed532fc9c282690a 386 PIRSF PIRSF000429 1 386 1.2E-124 T 11-10-2018 IPR002155 Thiolase GO:0016747 Patl_0202 8c37ba6cec13df57ed532fc9c282690a 386 Pfam PF00108 Thiolase, N-terminal domain 4 252 7.8E-73 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Patl_0202 8c37ba6cec13df57ed532fc9c282690a 386 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 386 62.633 T 11-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 Patl_0202 8c37ba6cec13df57ed532fc9c282690a 386 SUPERFAMILY SSF53901 1 257 1.41E-71 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_0202 8c37ba6cec13df57ed532fc9c282690a 386 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Patl_0202 8c37ba6cec13df57ed532fc9c282690a 386 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 386 1.6E-202 T 11-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 Patl_0202 8c37ba6cec13df57ed532fc9c282690a 386 Gene3D G3DSA:3.40.47.10 4 266 7.2E-144 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_0202 8c37ba6cec13df57ed532fc9c282690a 386 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 384 8.3E-134 T 11-10-2018 IPR002155 Thiolase GO:0016747 Patl_0202 8c37ba6cec13df57ed532fc9c282690a 386 SUPERFAMILY SSF53901 261 385 6.08E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_0378 2bdb156502960a8d66e4abf99dd8f567 465 Gene3D G3DSA:3.40.50.80 323 464 1.4E-27 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_0378 2bdb156502960a8d66e4abf99dd8f567 465 Pfam PF00175 Oxidoreductase NAD-binding domain 335 445 3.4E-16 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Patl_0378 2bdb156502960a8d66e4abf99dd8f567 465 Pfam PF01794 Ferric reductase like transmembrane component 63 181 2.0E-13 T 11-10-2018 IPR013130 Ferric reductase transmembrane component-like domain Patl_0378 2bdb156502960a8d66e4abf99dd8f567 465 Gene3D G3DSA:2.40.30.10 220 321 2.1E-13 T 11-10-2018 Patl_0378 2bdb156502960a8d66e4abf99dd8f567 465 Pfam PF08022 FAD-binding domain 244 307 3.5E-7 T 11-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 Patl_0378 2bdb156502960a8d66e4abf99dd8f567 465 PRINTS PR00410 Phenol hydroxylase reductase family signature 431 439 8.6E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Patl_0378 2bdb156502960a8d66e4abf99dd8f567 465 PRINTS PR00410 Phenol hydroxylase reductase family signature 318 327 8.6E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Patl_0378 2bdb156502960a8d66e4abf99dd8f567 465 PRINTS PR00410 Phenol hydroxylase reductase family signature 334 353 8.6E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Patl_0378 2bdb156502960a8d66e4abf99dd8f567 465 PRINTS PR00410 Phenol hydroxylase reductase family signature 257 269 8.6E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Patl_0378 2bdb156502960a8d66e4abf99dd8f567 465 PRINTS PR00410 Phenol hydroxylase reductase family signature 359 368 8.6E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Patl_0378 2bdb156502960a8d66e4abf99dd8f567 465 SUPERFAMILY SSF52343 313 461 1.7E-33 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_0378 2bdb156502960a8d66e4abf99dd8f567 465 SUPERFAMILY SSF63380 228 324 2.65E-16 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Patl_4022 9496e6a7bb0ebb13b8afc31c4a0b4329 131 SUPERFAMILY SSF82784 1 128 4.06E-36 T 11-10-2018 IPR036102 OsmC/Ohr superfamily Patl_4022 9496e6a7bb0ebb13b8afc31c4a0b4329 131 Gene3D G3DSA:3.30.300.20 34 130 7.6E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Patl_4022 9496e6a7bb0ebb13b8afc31c4a0b4329 131 Gene3D G3DSA:2.20.25.10 1 33 9.4E-8 T 11-10-2018 Patl_4022 9496e6a7bb0ebb13b8afc31c4a0b4329 131 Pfam PF02566 OsmC-like protein 27 125 2.1E-18 T 11-10-2018 IPR003718 OsmC/Ohr family Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 Gene3D G3DSA:3.30.2090.10 179 270 1.0E-256 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 Pfam PF00873 AcrB/AcrD/AcrF family 3 1016 1.7E-174 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 Gene3D G3DSA:3.30.70.1440 660 861 1.0E-256 T 11-10-2018 Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 Gene3D G3DSA:3.30.70.1320 135 328 1.0E-256 T 11-10-2018 Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 SUPERFAMILY SSF82693 41 134 6.45E-18 T 11-10-2018 Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 SUPERFAMILY SSF82693 136 325 6.28E-21 T 11-10-2018 Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 SUPERFAMILY SSF82866 803 1020 7.06E-47 T 11-10-2018 Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 Gene3D G3DSA:3.30.70.1430 40 809 1.0E-256 T 11-10-2018 Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 SUPERFAMILY SSF82714 717 792 4.45E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 7.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 7.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 7.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 7.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 Gene3D G3DSA:1.20.1640.10 10 508 1.0E-256 T 11-10-2018 Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 Gene3D G3DSA:3.30.2090.10 711 801 1.0E-256 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 SUPERFAMILY SSF82866 293 491 4.19E-36 T 11-10-2018 Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 SUPERFAMILY SSF82714 184 266 1.44E-13 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 Gene3D G3DSA:3.30.70.1430 561 659 1.0E-256 T 11-10-2018 Patl_2869 4910b34aee342aa1d94f23f50cffdd28 1024 Gene3D G3DSA:1.20.1640.10 509 1013 1.0E-256 T 11-10-2018 Patl_3730 01b8d55084b6255d7a24d8654f8feaf4 805 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 46 372 3.2E-78 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Patl_3730 01b8d55084b6255d7a24d8654f8feaf4 805 Gene3D G3DSA:2.60.40.10 670 785 9.0E-37 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_3730 01b8d55084b6255d7a24d8654f8feaf4 805 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 293 310 - T 11-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 Patl_3730 01b8d55084b6255d7a24d8654f8feaf4 805 Gene3D G3DSA:3.20.20.300 34 393 2.8E-122 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Patl_3730 01b8d55084b6255d7a24d8654f8feaf4 805 Pfam PF14310 Fibronectin type III-like domain 704 773 2.0E-23 T 11-10-2018 IPR026891 Fibronectin type III-like domain Patl_3730 01b8d55084b6255d7a24d8654f8feaf4 805 Gene3D G3DSA:3.40.50.1700 396 669 9.3E-78 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Patl_3730 01b8d55084b6255d7a24d8654f8feaf4 805 SUPERFAMILY SSF52279 411 670 1.7E-55 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Patl_3730 01b8d55084b6255d7a24d8654f8feaf4 805 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 411 667 1.1E-61 T 11-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 Patl_3730 01b8d55084b6255d7a24d8654f8feaf4 805 SMART SM01217 704 773 3.7E-35 T 11-10-2018 IPR026891 Fibronectin type III-like domain Patl_3730 01b8d55084b6255d7a24d8654f8feaf4 805 PRINTS PR00133 Glycosyl hydrolase family 3 signature 222 238 7.4E-24 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Patl_3730 01b8d55084b6255d7a24d8654f8feaf4 805 PRINTS PR00133 Glycosyl hydrolase family 3 signature 184 200 7.4E-24 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Patl_3730 01b8d55084b6255d7a24d8654f8feaf4 805 PRINTS PR00133 Glycosyl hydrolase family 3 signature 293 311 7.4E-24 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Patl_3730 01b8d55084b6255d7a24d8654f8feaf4 805 PRINTS PR00133 Glycosyl hydrolase family 3 signature 115 131 7.4E-24 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Patl_3730 01b8d55084b6255d7a24d8654f8feaf4 805 PRINTS PR00133 Glycosyl hydrolase family 3 signature 138 157 7.4E-24 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Patl_3730 01b8d55084b6255d7a24d8654f8feaf4 805 SUPERFAMILY SSF51445 27 410 3.9E-110 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_3272 99d78fc2cd94fff84d5c7f4bb696ee0b 352 Gene3D G3DSA:1.10.260.40 10 69 5.4E-20 T 11-10-2018 Patl_3272 99d78fc2cd94fff84d5c7f4bb696ee0b 352 SUPERFAMILY SSF47413 15 73 3.84E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_3272 99d78fc2cd94fff84d5c7f4bb696ee0b 352 SUPERFAMILY SSF53822 76 349 2.65E-83 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Patl_3272 99d78fc2cd94fff84d5c7f4bb696ee0b 352 Pfam PF00356 Bacterial regulatory proteins, lacI family 18 62 1.8E-17 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_3272 99d78fc2cd94fff84d5c7f4bb696ee0b 352 Gene3D G3DSA:3.40.50.2300 176 305 1.8E-80 T 11-10-2018 Patl_3272 99d78fc2cd94fff84d5c7f4bb696ee0b 352 SMART SM00354 15 85 7.0E-25 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_3272 99d78fc2cd94fff84d5c7f4bb696ee0b 352 Pfam PF13377 Periplasmic binding protein-like domain 184 345 3.1E-42 T 11-10-2018 Patl_3272 99d78fc2cd94fff84d5c7f4bb696ee0b 352 Gene3D G3DSA:3.40.50.2300 70 322 1.8E-80 T 11-10-2018 Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 SUPERFAMILY SSF52540 140 384 1.1E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 8.2E-226 T 11-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 Gene3D G3DSA:3.40.50.300 126 312 9.0E-67 T 11-10-2018 Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 SUPERFAMILY SSF46689 380 468 2.06E-20 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 SMART SM00382 161 304 2.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 Gene3D G3DSA:1.10.8.60 313 384 4.5E-22 T 11-10-2018 Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 2.6E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 468 2.6E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 Pfam PF00072 Response regulator receiver domain 6 113 9.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 Pfam PF02954 Bacterial regulatory protein, Fis family 429 466 3.8E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 Gene3D G3DSA:3.40.50.2300 2 125 7.6E-37 T 11-10-2018 Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 SUPERFAMILY SSF52172 5 186 4.13E-40 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 Gene3D G3DSA:1.10.10.60 385 468 4.6E-23 T 11-10-2018 Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 Pfam PF00158 Sigma-54 interaction domain 141 308 1.1E-70 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Patl_1028 2321c6606acb245d6d4dafa3a5bfeb8a 468 SMART SM00448 4 116 6.1E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0177 b25f6f4e1898256826872f8439d18b2d 186 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0177 b25f6f4e1898256826872f8439d18b2d 186 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 5.8E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0177 b25f6f4e1898256826872f8439d18b2d 186 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 1.0E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0177 b25f6f4e1898256826872f8439d18b2d 186 Gene3D G3DSA:3.30.700.10 10 181 2.1E-12 T 11-10-2018 Patl_0177 b25f6f4e1898256826872f8439d18b2d 186 SUPERFAMILY SSF54523 10 152 6.04E-14 T 11-10-2018 Patl_1564 144c0c17978319d05bbb3a16c9357ab1 340 Gene3D G3DSA:3.40.50.300 1 139 1.9E-49 T 11-10-2018 Patl_1564 144c0c17978319d05bbb3a16c9357ab1 340 Gene3D G3DSA:1.20.272.10 213 339 3.0E-32 T 11-10-2018 Patl_1564 144c0c17978319d05bbb3a16c9357ab1 340 SUPERFAMILY SSF52540 1 209 4.32E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1564 144c0c17978319d05bbb3a16c9357ab1 340 Gene3D G3DSA:1.10.8.60 142 212 1.5E-24 T 11-10-2018 Patl_1564 144c0c17978319d05bbb3a16c9357ab1 340 Pfam PF06144 DNA polymerase III, delta subunit 20 189 4.5E-34 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 Patl_1564 144c0c17978319d05bbb3a16c9357ab1 340 SUPERFAMILY SSF48019 211 328 2.64E-21 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Patl_1564 144c0c17978319d05bbb3a16c9357ab1 340 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 329 4.7E-84 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 Patl_1564 144c0c17978319d05bbb3a16c9357ab1 340 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 331 2.9E-14 T 11-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_0906 5edf4a65973bbc63f4f0ac700009be5c 273 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_0906 5edf4a65973bbc63f4f0ac700009be5c 273 Pfam PF00106 short chain dehydrogenase 9 203 5.0E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0906 5edf4a65973bbc63f4f0ac700009be5c 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 7.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0906 5edf4a65973bbc63f4f0ac700009be5c 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 7.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0906 5edf4a65973bbc63f4f0ac700009be5c 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 7.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0906 5edf4a65973bbc63f4f0ac700009be5c 273 Gene3D G3DSA:3.40.50.720 4 259 1.4E-58 T 11-10-2018 Patl_0906 5edf4a65973bbc63f4f0ac700009be5c 273 SUPERFAMILY SSF51735 4 250 6.58E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0906 5edf4a65973bbc63f4f0ac700009be5c 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.5E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0906 5edf4a65973bbc63f4f0ac700009be5c 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.5E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0906 5edf4a65973bbc63f4f0ac700009be5c 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.5E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0906 5edf4a65973bbc63f4f0ac700009be5c 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.5E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0906 5edf4a65973bbc63f4f0ac700009be5c 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.5E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0906 5edf4a65973bbc63f4f0ac700009be5c 273 PIRSF PIRSF000126 1 267 7.1E-74 T 11-10-2018 Patl_2925 47bd046ce76bffd59320ee8f2cf48ea6 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Patl_2925 47bd046ce76bffd59320ee8f2cf48ea6 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 125 1.3E-34 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Patl_2925 47bd046ce76bffd59320ee8f2cf48ea6 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 8.0E-27 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Patl_2925 47bd046ce76bffd59320ee8f2cf48ea6 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Patl_2925 47bd046ce76bffd59320ee8f2cf48ea6 389 Gene3D G3DSA:2.40.110.10 128 241 4.4E-46 T 11-10-2018 Patl_2925 47bd046ce76bffd59320ee8f2cf48ea6 389 SUPERFAMILY SSF47203 235 387 2.26E-48 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_2925 47bd046ce76bffd59320ee8f2cf48ea6 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 1.2E-43 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_2925 47bd046ce76bffd59320ee8f2cf48ea6 389 SUPERFAMILY SSF56645 6 249 3.4E-86 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_2925 47bd046ce76bffd59320ee8f2cf48ea6 389 Gene3D G3DSA:1.10.540.10 3 127 1.4E-44 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Patl_2925 47bd046ce76bffd59320ee8f2cf48ea6 389 Gene3D G3DSA:1.20.140.10 242 389 2.5E-47 T 11-10-2018 Patl_2925 47bd046ce76bffd59320ee8f2cf48ea6 389 PIRSF PIRSF016578 20 103 1.8 T 11-10-2018 Patl_2925 47bd046ce76bffd59320ee8f2cf48ea6 389 PIRSF PIRSF016578 137 389 5.7E-11 T 11-10-2018 Patl_0967 115187ba3be4ddea16ce4db7f820610c 869 SUPERFAMILY SSF56935 32 869 8.85E-107 T 11-10-2018 Patl_0967 115187ba3be4ddea16ce4db7f820610c 869 Gene3D G3DSA:2.170.130.10 26 169 1.5E-34 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_0967 115187ba3be4ddea16ce4db7f820610c 869 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 852 869 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site Patl_0967 115187ba3be4ddea16ce4db7f820610c 869 Pfam PF00593 TonB dependent receptor 381 868 1.1E-49 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0967 115187ba3be4ddea16ce4db7f820610c 869 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 165 2.4E-22 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0967 115187ba3be4ddea16ce4db7f820610c 869 Gene3D G3DSA:2.40.170.20 299 869 4.9E-65 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_0121 3ff957b734081cd9f5dd02402170a0fb 335 Pfam PF13377 Periplasmic binding protein-like domain 169 330 9.3E-37 T 11-10-2018 Patl_0121 3ff957b734081cd9f5dd02402170a0fb 335 SMART SM00354 1 71 3.4E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_0121 3ff957b734081cd9f5dd02402170a0fb 335 SUPERFAMILY SSF47413 1 60 7.59E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_0121 3ff957b734081cd9f5dd02402170a0fb 335 SUPERFAMILY SSF53822 61 333 2.98E-79 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Patl_0121 3ff957b734081cd9f5dd02402170a0fb 335 Gene3D G3DSA:1.10.260.40 1 54 5.4E-17 T 11-10-2018 Patl_0121 3ff957b734081cd9f5dd02402170a0fb 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 4.4E-14 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_0121 3ff957b734081cd9f5dd02402170a0fb 335 Gene3D G3DSA:3.40.50.2300 161 290 1.8E-77 T 11-10-2018 Patl_0121 3ff957b734081cd9f5dd02402170a0fb 335 Gene3D G3DSA:3.40.50.2300 55 306 1.8E-77 T 11-10-2018 Patl_2826 3792ea3b3f94a4012705a0007d74895c 285 Pfam PF02616 Segregation and condensation protein ScpA 67 279 1.2E-26 T 11-10-2018 IPR003768 Segregation and condensation protein A Patl_2826 3792ea3b3f94a4012705a0007d74895c 285 Hamap MF_01805 Segregation and condensation protein A [scpA]. 50 281 21.276 T 11-10-2018 IPR003768 Segregation and condensation protein A Patl_1654 6f1e41f2c9f612ce3e257859a1113d57 152 Gene3D G3DSA:3.40.630.30 5 147 9.0E-38 T 11-10-2018 Patl_1654 6f1e41f2c9f612ce3e257859a1113d57 152 SUPERFAMILY SSF55729 10 150 6.38E-33 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_1654 6f1e41f2c9f612ce3e257859a1113d57 152 Pfam PF13673 Acetyltransferase (GNAT) domain 31 147 1.6E-21 T 11-10-2018 IPR000182 GNAT domain Patl_2199 4ddb12f2cd8a00c41b2bd7d9e33d95a6 174 PIRSF PIRSF019401 1 173 5.8E-72 T 11-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 Patl_2199 4ddb12f2cd8a00c41b2bd7d9e33d95a6 174 Gene3D G3DSA:1.20.1380.10 52 165 5.8E-36 T 11-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 Patl_2199 4ddb12f2cd8a00c41b2bd7d9e33d95a6 174 SUPERFAMILY SSF47598 1 33 4.89E-13 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Patl_2199 4ddb12f2cd8a00c41b2bd7d9e33d95a6 174 Pfam PF03925 SeqA protein C-terminal domain 61 159 9.2E-32 T 11-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 Patl_2199 4ddb12f2cd8a00c41b2bd7d9e33d95a6 174 Gene3D G3DSA:1.10.1220.10 1 39 2.1E-21 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Patl_2199 4ddb12f2cd8a00c41b2bd7d9e33d95a6 174 SUPERFAMILY SSF82808 53 164 7.98E-33 T 11-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 Patl_2199 4ddb12f2cd8a00c41b2bd7d9e33d95a6 174 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 167 41.74 T 11-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 Patl_2199 4ddb12f2cd8a00c41b2bd7d9e33d95a6 174 Pfam PF17206 SeqA protein N-terminal domain 1 33 1.2E-20 T 11-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal Patl_3916 de25ef74bffaad1a7071954d03a2c829 297 Gene3D G3DSA:3.40.190.10 92 291 7.4E-69 T 11-10-2018 Patl_3916 de25ef74bffaad1a7071954d03a2c829 297 SUPERFAMILY SSF53850 88 292 9.5E-38 T 11-10-2018 Patl_3916 de25ef74bffaad1a7071954d03a2c829 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 3.6E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3916 de25ef74bffaad1a7071954d03a2c829 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.6E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3916 de25ef74bffaad1a7071954d03a2c829 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.6E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3916 de25ef74bffaad1a7071954d03a2c829 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.6E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3916 de25ef74bffaad1a7071954d03a2c829 297 Gene3D G3DSA:3.40.190.10 163 268 7.4E-69 T 11-10-2018 Patl_3916 de25ef74bffaad1a7071954d03a2c829 297 Pfam PF03466 LysR substrate binding domain 88 292 1.2E-35 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_3916 de25ef74bffaad1a7071954d03a2c829 297 SUPERFAMILY SSF46785 2 111 3.53E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3916 de25ef74bffaad1a7071954d03a2c829 297 Gene3D G3DSA:1.10.10.10 1 91 2.8E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1799 1cc6622c3c442ea46c226da98396734a 940 PIRSF PIRSF000157 1 939 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Patl_1799 1cc6622c3c442ea46c226da98396734a 940 SMART SM00861 598 791 1.2E-59 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Patl_1799 1cc6622c3c442ea46c226da98396734a 940 Gene3D G3DSA:3.40.50.11610 728 934 7.4E-169 T 11-10-2018 Patl_1799 1cc6622c3c442ea46c226da98396734a 940 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 937 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Patl_1799 1cc6622c3c442ea46c226da98396734a 940 Pfam PF02779 Transketolase, pyrimidine binding domain 598 792 2.6E-64 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Patl_1799 1cc6622c3c442ea46c226da98396734a 940 SUPERFAMILY SSF52518 126 550 1.93E-83 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Patl_1799 1cc6622c3c442ea46c226da98396734a 940 Gene3D G3DSA:3.40.50.12470 561 807 7.4E-169 T 11-10-2018 Patl_1799 1cc6622c3c442ea46c226da98396734a 940 Gene3D G3DSA:1.10.287.1150 89 171 5.5E-27 T 11-10-2018 Patl_1799 1cc6622c3c442ea46c226da98396734a 940 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 4.5E-17 T 11-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Patl_1799 1cc6622c3c442ea46c226da98396734a 940 Gene3D G3DSA:3.40.50.970 172 538 3.7E-146 T 11-10-2018 Patl_1799 1cc6622c3c442ea46c226da98396734a 940 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 795 937 2.8E-53 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Patl_1799 1cc6622c3c442ea46c226da98396734a 940 SUPERFAMILY SSF52518 582 798 1.08E-51 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Patl_1799 1cc6622c3c442ea46c226da98396734a 940 Pfam PF00676 Dehydrogenase E1 component 220 522 1.8E-49 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Patl_1941 e7be1b1f81a4a1e60f20c5d2014ce479 1450 SUPERFAMILY SSF49452 70 212 1.34E-27 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Patl_1941 e7be1b1f81a4a1e60f20c5d2014ce479 1450 Gene3D G3DSA:2.60.40.1180 1026 1116 3.9E-19 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_1941 e7be1b1f81a4a1e60f20c5d2014ce479 1450 SUPERFAMILY SSF81296 350 457 4.67E-20 T 11-10-2018 IPR014756 Immunoglobulin E-set Patl_1941 e7be1b1f81a4a1e60f20c5d2014ce479 1450 Gene3D G3DSA:2.60.40.1130 225 340 7.8E-27 T 11-10-2018 Patl_1941 e7be1b1f81a4a1e60f20c5d2014ce479 1450 Pfam PF11852 Domain of unknown function (DUF3372) 922 1103 5.0E-57 T 11-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal Patl_1941 e7be1b1f81a4a1e60f20c5d2014ce479 1450 Pfam PF03714 Bacterial pullanase-associated domain 107 193 6.8E-9 T 11-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 Patl_1941 e7be1b1f81a4a1e60f20c5d2014ce479 1450 Gene3D G3DSA:3.20.20.80 453 1015 1.8E-186 T 11-10-2018 Patl_1941 e7be1b1f81a4a1e60f20c5d2014ce479 1450 SUPERFAMILY SSF51445 451 980 5.05E-110 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_1941 e7be1b1f81a4a1e60f20c5d2014ce479 1450 Gene3D G3DSA:2.60.40.10 346 452 3.1E-25 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_1941 e7be1b1f81a4a1e60f20c5d2014ce479 1450 Gene3D G3DSA:2.60.40.10 1122 1185 4.7E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_1941 e7be1b1f81a4a1e60f20c5d2014ce479 1450 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 354 438 5.6E-12 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Patl_1941 e7be1b1f81a4a1e60f20c5d2014ce479 1450 SUPERFAMILY SSF81296 216 341 2.94E-30 T 11-10-2018 IPR014756 Immunoglobulin E-set Patl_1941 e7be1b1f81a4a1e60f20c5d2014ce479 1450 SUPERFAMILY SSF81296 1124 1172 7.0E-5 T 11-10-2018 IPR014756 Immunoglobulin E-set Patl_1941 e7be1b1f81a4a1e60f20c5d2014ce479 1450 Gene3D G3DSA:2.60.40.1110 72 212 3.4E-25 T 11-10-2018 Patl_1941 e7be1b1f81a4a1e60f20c5d2014ce479 1450 SUPERFAMILY SSF51011 983 1114 2.59E-32 T 11-10-2018 Patl_1491 3aa7de68413e99a0988ac3b1897a552b 244 SUPERFAMILY SSF50475 13 236 1.29E-49 T 11-10-2018 Patl_1491 3aa7de68413e99a0988ac3b1897a552b 244 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 10 148 2.2E-19 T 11-10-2018 Patl_1491 3aa7de68413e99a0988ac3b1897a552b 244 Pfam PF10615 Protein of unknown function (DUF2470) 161 229 1.6E-11 T 11-10-2018 IPR019595 Domain of unknown function DUF2470 Patl_1491 3aa7de68413e99a0988ac3b1897a552b 244 Gene3D G3DSA:3.20.180.10 157 240 9.7E-18 T 11-10-2018 IPR037119 Haem oxygenase HugZ-like superfamily Patl_1491 3aa7de68413e99a0988ac3b1897a552b 244 Gene3D G3DSA:2.30.110.10 6 148 3.3E-42 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Patl_3410 489116ff0449244e76cdb9ef1ab633f9 781 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 151 5.2E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3410 489116ff0449244e76cdb9ef1ab633f9 781 Pfam PF00593 TonB dependent receptor 405 779 3.3E-30 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3410 489116ff0449244e76cdb9ef1ab633f9 781 SUPERFAMILY SSF56935 28 781 3.79E-80 T 11-10-2018 Patl_3410 489116ff0449244e76cdb9ef1ab633f9 781 Gene3D G3DSA:2.170.130.10 48 171 9.0E-13 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_3410 489116ff0449244e76cdb9ef1ab633f9 781 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 764 781 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site Patl_0785 a1bb5cbca955b112b28ddd7180e0baa3 829 Gene3D G3DSA:3.55.50.30 25 129 4.0E-18 T 11-10-2018 Patl_0785 a1bb5cbca955b112b28ddd7180e0baa3 829 SUPERFAMILY SSF56935 119 829 2.72E-110 T 11-10-2018 Patl_0785 a1bb5cbca955b112b28ddd7180e0baa3 829 Pfam PF00593 TonB dependent receptor 363 827 1.4E-30 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0785 a1bb5cbca955b112b28ddd7180e0baa3 829 Gene3D G3DSA:2.40.170.20 130 829 6.4E-121 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_0785 a1bb5cbca955b112b28ddd7180e0baa3 829 Pfam PF07715 TonB-dependent Receptor Plug Domain 135 245 1.3E-21 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0785 a1bb5cbca955b112b28ddd7180e0baa3 829 SMART SM00965 52 103 4.4E-7 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Patl_0636 def1fe7f28bcb55c4dbc0595dcfee2f8 302 Gene3D G3DSA:3.40.190.10 175 271 1.5E-52 T 11-10-2018 Patl_0636 def1fe7f28bcb55c4dbc0595dcfee2f8 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 71 7.2E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0636 def1fe7f28bcb55c4dbc0595dcfee2f8 302 Pfam PF03466 LysR substrate binding domain 100 295 1.0E-21 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_0636 def1fe7f28bcb55c4dbc0595dcfee2f8 302 Gene3D G3DSA:3.40.190.10 96 295 1.5E-52 T 11-10-2018 Patl_0636 def1fe7f28bcb55c4dbc0595dcfee2f8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 4.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0636 def1fe7f28bcb55c4dbc0595dcfee2f8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 4.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0636 def1fe7f28bcb55c4dbc0595dcfee2f8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 4.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0636 def1fe7f28bcb55c4dbc0595dcfee2f8 302 SUPERFAMILY SSF46785 8 91 4.99E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0636 def1fe7f28bcb55c4dbc0595dcfee2f8 302 SUPERFAMILY SSF53850 94 296 2.35E-36 T 11-10-2018 Patl_0636 def1fe7f28bcb55c4dbc0595dcfee2f8 302 Gene3D G3DSA:1.10.10.10 3 93 2.3E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1272 793c55be3fa02e577325cab5baf508bc 350 Gene3D G3DSA:3.20.80.10 198 350 1.6E-24 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Patl_1272 793c55be3fa02e577325cab5baf508bc 350 Pfam PF06445 GyrI-like small molecule binding domain 198 349 6.2E-20 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain Patl_1272 793c55be3fa02e577325cab5baf508bc 350 SUPERFAMILY SSF55136 199 349 4.58E-21 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily Patl_1272 793c55be3fa02e577325cab5baf508bc 350 SUPERFAMILY SSF46689 22 69 2.87E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1272 793c55be3fa02e577325cab5baf508bc 350 SUPERFAMILY SSF46689 73 125 7.17E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1272 793c55be3fa02e577325cab5baf508bc 350 Pfam PF12833 Helix-turn-helix domain 42 122 4.8E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_1272 793c55be3fa02e577325cab5baf508bc 350 Gene3D G3DSA:1.10.10.60 11 72 1.9E-13 T 11-10-2018 Patl_1272 793c55be3fa02e577325cab5baf508bc 350 Gene3D G3DSA:1.10.10.60 73 130 1.2E-13 T 11-10-2018 Patl_1272 793c55be3fa02e577325cab5baf508bc 350 SMART SM00871 197 350 4.3E-26 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding Patl_1272 793c55be3fa02e577325cab5baf508bc 350 SMART SM00342 36 120 2.2E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_3170 b22a781061aab12134fd8424eab6f835 155 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 34 121 3.4E-12 T 11-10-2018 IPR031982 Type IV minor pilin ComP Patl_3170 b22a781061aab12134fd8424eab6f835 155 Gene3D G3DSA:3.30.700.10 13 153 1.9E-17 T 11-10-2018 Patl_3170 b22a781061aab12134fd8424eab6f835 155 SUPERFAMILY SSF54523 13 135 1.49E-17 T 11-10-2018 Patl_3170 b22a781061aab12134fd8424eab6f835 155 PRINTS PR00813 Bacterial general secretion pathway protein G signature 12 37 7.3E-9 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Patl_3170 b22a781061aab12134fd8424eab6f835 155 PRINTS PR00813 Bacterial general secretion pathway protein G signature 48 66 7.3E-9 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Patl_3170 b22a781061aab12134fd8424eab6f835 155 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 33 3.0E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3170 b22a781061aab12134fd8424eab6f835 155 ProSitePatterns PS00018 EF-hand calcium-binding domain. 139 151 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Patl_3170 b22a781061aab12134fd8424eab6f835 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 6.2E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0987 d961b16dbfec8370f939a6bec61481d7 235 SUPERFAMILY SSF52172 4 128 1.32E-38 T 11-10-2018 IPR011006 CheY-like superfamily Patl_0987 d961b16dbfec8370f939a6bec61481d7 235 Pfam PF00072 Response regulator receiver domain 7 115 8.2E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0987 d961b16dbfec8370f939a6bec61481d7 235 Gene3D G3DSA:1.10.10.10 125 234 3.3E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0987 d961b16dbfec8370f939a6bec61481d7 235 SMART SM00862 156 231 2.0E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_0987 d961b16dbfec8370f939a6bec61481d7 235 SUPERFAMILY SSF46894 131 231 4.25E-24 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_0987 d961b16dbfec8370f939a6bec61481d7 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 4.0E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_0987 d961b16dbfec8370f939a6bec61481d7 235 Gene3D G3DSA:3.40.50.2300 1 124 1.6E-35 T 11-10-2018 Patl_0987 d961b16dbfec8370f939a6bec61481d7 235 SMART SM00448 4 115 9.7E-45 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0090 d01ee8831fccd0787b6ff5900af8acd8 449 Gene3D G3DSA:3.40.50.20 1 85 7.4E-34 T 11-10-2018 Patl_0090 d01ee8831fccd0787b6ff5900af8acd8 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 6.6E-236 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 Patl_0090 d01ee8831fccd0787b6ff5900af8acd8 449 Gene3D G3DSA:3.30.470.20 87 433 3.7E-152 T 11-10-2018 Patl_0090 d01ee8831fccd0787b6ff5900af8acd8 449 SMART SM00878 336 441 1.0E-66 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Patl_0090 d01ee8831fccd0787b6ff5900af8acd8 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.9E-38 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Patl_0090 d01ee8831fccd0787b6ff5900af8acd8 449 SUPERFAMILY SSF52440 1 113 7.19E-45 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Patl_0090 d01ee8831fccd0787b6ff5900af8acd8 449 SUPERFAMILY SSF56059 83 344 7.24E-65 T 11-10-2018 Patl_0090 d01ee8831fccd0787b6ff5900af8acd8 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.3E-43 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Patl_0090 d01ee8831fccd0787b6ff5900af8acd8 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 3.9E-80 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Patl_0090 d01ee8831fccd0787b6ff5900af8acd8 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Patl_0090 d01ee8831fccd0787b6ff5900af8acd8 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Patl_0090 d01ee8831fccd0787b6ff5900af8acd8 449 Gene3D G3DSA:3.30.1490.20 131 203 3.7E-152 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Patl_0090 d01ee8831fccd0787b6ff5900af8acd8 449 SUPERFAMILY SSF51246 331 444 1.52E-43 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Patl_3666 31a610d08348c6aaa7427ed07b8d61c0 301 Gene3D G3DSA:3.30.1490.20 115 181 2.0E-27 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Patl_3666 31a610d08348c6aaa7427ed07b8d61c0 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 1.2E-68 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 Patl_3666 31a610d08348c6aaa7427ed07b8d61c0 301 SUPERFAMILY SSF56059 98 288 2.09E-50 T 11-10-2018 Patl_3666 31a610d08348c6aaa7427ed07b8d61c0 301 Gene3D G3DSA:3.40.50.20 1 114 3.7E-39 T 11-10-2018 Patl_3666 31a610d08348c6aaa7427ed07b8d61c0 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 1.3E-85 T 11-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 Patl_3666 31a610d08348c6aaa7427ed07b8d61c0 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 51.225 T 11-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK Patl_3666 31a610d08348c6aaa7427ed07b8d61c0 301 Gene3D G3DSA:3.30.470.80 182 299 2.9E-43 T 11-10-2018 Patl_2360 dfe5bf946e0f2002ad0fa82c8832d1fe 411 Pfam PF02687 FtsX-like permease family 298 405 3.3E-13 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Patl_2360 dfe5bf946e0f2002ad0fa82c8832d1fe 411 Pfam PF12704 MacB-like periplasmic core domain 28 191 1.2E-10 T 11-10-2018 IPR025857 MacB-like periplasmic core domain Patl_2360 dfe5bf946e0f2002ad0fa82c8832d1fe 411 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 409 3.5E-123 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 Patl_0895 8a662a3254eed0affe37b6b767f2de95 471 ProSitePatterns PS00523 Sulfatases signature 1. 73 85 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_0895 8a662a3254eed0affe37b6b767f2de95 471 Gene3D G3DSA:3.30.1120.10 382 438 1.3E-130 T 11-10-2018 Patl_0895 8a662a3254eed0affe37b6b767f2de95 471 Gene3D G3DSA:3.40.720.10 26 381 1.3E-130 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_0895 8a662a3254eed0affe37b6b767f2de95 471 Pfam PF00884 Sulfatase 27 350 2.5E-74 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_0895 8a662a3254eed0affe37b6b767f2de95 471 SUPERFAMILY SSF53649 25 439 4.36E-124 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_2790 cec3dfadaa4cc9d34f8457d81c727db1 341 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 10 116 2.7E-10 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Patl_2790 cec3dfadaa4cc9d34f8457d81c727db1 341 SMART SM00922 135 226 1.2E-8 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Patl_2790 cec3dfadaa4cc9d34f8457d81c727db1 341 Gene3D G3DSA:3.20.20.120 110 331 2.2E-50 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Patl_2790 cec3dfadaa4cc9d34f8457d81c727db1 341 Gene3D G3DSA:3.30.390.10 1 108 2.5E-24 T 11-10-2018 IPR029017 Enolase-like, N-terminal Patl_2790 cec3dfadaa4cc9d34f8457d81c727db1 341 Pfam PF13378 Enolase C-terminal domain-like 151 287 1.3E-20 T 11-10-2018 IPR029065 Enolase C-terminal domain-like Patl_2790 cec3dfadaa4cc9d34f8457d81c727db1 341 SUPERFAMILY SSF51604 123 322 3.54E-48 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Patl_2790 cec3dfadaa4cc9d34f8457d81c727db1 341 SUPERFAMILY SSF54826 5 116 5.11E-22 T 11-10-2018 Patl_2790 cec3dfadaa4cc9d34f8457d81c727db1 341 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 176 207 - T 11-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Patl_0187 466c45abc169db996132a2e85e93ab1f 487 Pfam PF10150 Ribonuclease E/G family 124 391 1.8E-100 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Patl_0187 466c45abc169db996132a2e85e93ab1f 487 Pfam PF00575 S1 RNA binding domain 38 109 1.4E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 Patl_0187 466c45abc169db996132a2e85e93ab1f 487 Gene3D G3DSA:2.40.50.140 30 127 1.4E-30 T 11-10-2018 Patl_0187 466c45abc169db996132a2e85e93ab1f 487 SMART SM00316 37 122 2.1E-8 T 11-10-2018 IPR022967 RNA-binding domain, S1 Patl_0187 466c45abc169db996132a2e85e93ab1f 487 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 424 2.9E-160 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Patl_0187 466c45abc169db996132a2e85e93ab1f 487 Gene3D G3DSA:3.40.1260.20 401 485 3.0E-5 T 11-10-2018 Patl_0187 466c45abc169db996132a2e85e93ab1f 487 SUPERFAMILY SSF50249 39 127 9.43E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_3049 d517f6e30fd2ec173228ae609e4414c1 447 SMART SM00448 4 115 9.3E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3049 d517f6e30fd2ec173228ae609e4414c1 447 SUPERFAMILY SSF52172 1 173 2.13E-39 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3049 d517f6e30fd2ec173228ae609e4414c1 447 Gene3D G3DSA:3.40.50.300 124 300 1.3E-62 T 11-10-2018 Patl_3049 d517f6e30fd2ec173228ae609e4414c1 447 SUPERFAMILY SSF52540 136 370 7.17E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3049 d517f6e30fd2ec173228ae609e4414c1 447 Pfam PF00158 Sigma-54 interaction domain 133 295 2.5E-65 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Patl_3049 d517f6e30fd2ec173228ae609e4414c1 447 Gene3D G3DSA:1.10.8.60 302 377 9.1E-25 T 11-10-2018 Patl_3049 d517f6e30fd2ec173228ae609e4414c1 447 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Patl_3049 d517f6e30fd2ec173228ae609e4414c1 447 Gene3D G3DSA:3.40.50.2300 1 123 4.7E-35 T 11-10-2018 Patl_3049 d517f6e30fd2ec173228ae609e4414c1 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 421 441 7.6E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_3049 d517f6e30fd2ec173228ae609e4414c1 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 404 421 7.6E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_3049 d517f6e30fd2ec173228ae609e4414c1 447 SUPERFAMILY SSF46689 342 438 5.38E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_3049 d517f6e30fd2ec173228ae609e4414c1 447 Pfam PF00072 Response regulator receiver domain 6 114 3.3E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3049 d517f6e30fd2ec173228ae609e4414c1 447 SMART SM00382 149 293 5.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3049 d517f6e30fd2ec173228ae609e4414c1 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Patl_3049 d517f6e30fd2ec173228ae609e4414c1 447 Gene3D G3DSA:1.10.10.60 378 444 1.8E-11 T 11-10-2018 Patl_3049 d517f6e30fd2ec173228ae609e4414c1 447 Pfam PF02954 Bacterial regulatory protein, Fis family 398 437 2.7E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_0064 fcd1db58d6f955ca1b11fa927ce1835f 292 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 5 93 1.5E-24 T 11-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 Patl_0064 fcd1db58d6f955ca1b11fa927ce1835f 292 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 7 281 1.1E-84 T 11-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 Patl_0064 fcd1db58d6f955ca1b11fa927ce1835f 292 Gene3D G3DSA:1.20.1540.10 102 282 2.8E-49 T 11-10-2018 IPR035952 Rhomboid-like superfamily Patl_0064 fcd1db58d6f955ca1b11fa927ce1835f 292 SUPERFAMILY SSF144091 103 284 2.75E-37 T 11-10-2018 Patl_0064 fcd1db58d6f955ca1b11fa927ce1835f 292 Pfam PF01694 Rhomboid family 143 283 1.7E-26 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Patl_3895 f61e176e9165768fc26ef1832c0c38b5 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Patl_3895 f61e176e9165768fc26ef1832c0c38b5 480 SUPERFAMILY SSF53720 2 475 9.95E-159 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_3895 f61e176e9165768fc26ef1832c0c38b5 480 Gene3D G3DSA:3.40.309.10 252 439 1.2E-161 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Patl_3895 f61e176e9165768fc26ef1832c0c38b5 480 Gene3D G3DSA:3.40.605.10 8 467 1.2E-161 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_3895 f61e176e9165768fc26ef1832c0c38b5 480 Pfam PF00171 Aldehyde dehydrogenase family 19 469 2.7E-159 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Patl_3848 044ebbc4117d306061f480fa0b493488 228 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 12 225 2.0E-94 T 11-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 Patl_3848 044ebbc4117d306061f480fa0b493488 228 Gene3D G3DSA:3.40.600.10 2 227 7.7E-53 T 11-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 Patl_3848 044ebbc4117d306061f480fa0b493488 228 Pfam PF02976 DNA mismatch repair enzyme MutH 60 158 2.9E-30 T 11-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 Patl_3848 044ebbc4117d306061f480fa0b493488 228 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 228 129.399 T 11-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 Patl_3848 044ebbc4117d306061f480fa0b493488 228 SMART SM00927 60 158 5.7E-58 T 11-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 Patl_3848 044ebbc4117d306061f480fa0b493488 228 SUPERFAMILY SSF52980 10 227 1.13E-70 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 SMART SM00382 278 422 5.4E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 56 160 9.0E-57 T 11-10-2018 IPR010523 Activator of aromatic catabolism Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 Gene3D G3DSA:1.10.8.60 429 494 1.0E-22 T 11-10-2018 Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 Gene3D G3DSA:1.10.10.60 519 590 5.3E-8 T 11-10-2018 Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 282 295 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 Gene3D G3DSA:3.30.1380.20 54 215 3.7E-9 T 11-10-2018 Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 SMART SM00989 148 210 2.2E-19 T 11-10-2018 IPR004096 4-vinyl reductase, 4VR Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 471 480 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 Pfam PF00158 Sigma-54 interaction domain 258 425 2.2E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 SUPERFAMILY SSF46689 472 589 3.99E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 Gene3D G3DSA:3.40.50.300 245 428 7.6E-62 T 11-10-2018 Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 Pfam PF02954 Bacterial regulatory protein, Fis family 548 584 7.5E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 571 590 1.1E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 554 571 1.1E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 SUPERFAMILY SSF111126 47 205 3.77E-11 T 11-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 SUPERFAMILY SSF52540 258 492 1.41E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 344 359 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 Pfam PF02830 V4R domain 167 210 3.0E-13 T 11-10-2018 IPR004096 4-vinyl reductase, 4VR Patl_3898 6aefbf44fa879c712fa39fccb3a9535b 590 Pfam PF06505 Activator of aromatic catabolism 36 137 8.2E-29 T 11-10-2018 IPR010523 Activator of aromatic catabolism Patl_4174 7c86298ac0e4ca02b077da44eb8f6eef 376 Gene3D G3DSA:2.30.40.10 7 368 2.0E-113 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Patl_4174 7c86298ac0e4ca02b077da44eb8f6eef 376 Gene3D G3DSA:3.20.20.140 51 338 2.0E-113 T 11-10-2018 Patl_4174 7c86298ac0e4ca02b077da44eb8f6eef 376 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 6 365 2.5E-87 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 Patl_4174 7c86298ac0e4ca02b077da44eb8f6eef 376 SUPERFAMILY SSF51338 5 373 2.83E-7 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Patl_4174 7c86298ac0e4ca02b077da44eb8f6eef 376 Pfam PF01979 Amidohydrolase family 47 359 9.1E-22 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Patl_4174 7c86298ac0e4ca02b077da44eb8f6eef 376 SUPERFAMILY SSF51556 50 344 5.58E-95 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_4174 7c86298ac0e4ca02b077da44eb8f6eef 376 PIRSF PIRSF038994 1 376 1.7E-103 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 Patl_2598 37c965ea9b224a79a75ebdf4935e6f72 402 SUPERFAMILY SSF53098 2 378 6.98E-63 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_2598 37c965ea9b224a79a75ebdf4935e6f72 402 Pfam PF01609 Transposase DDE domain 91 326 4.7E-19 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Patl_2744 37c965ea9b224a79a75ebdf4935e6f72 402 SUPERFAMILY SSF53098 2 378 6.98E-63 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_2744 37c965ea9b224a79a75ebdf4935e6f72 402 Pfam PF01609 Transposase DDE domain 91 326 4.7E-19 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Patl_3451 37c965ea9b224a79a75ebdf4935e6f72 402 SUPERFAMILY SSF53098 2 378 6.98E-63 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_3451 37c965ea9b224a79a75ebdf4935e6f72 402 Pfam PF01609 Transposase DDE domain 91 326 4.7E-19 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Patl_3718 5f61f3f95f958951281be9b440f635fa 227 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 226 7.5E-82 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Patl_3718 5f61f3f95f958951281be9b440f635fa 227 SUPERFAMILY SSF51419 2 224 8.43E-81 T 11-10-2018 IPR029066 PLP-binding barrel Patl_3718 5f61f3f95f958951281be9b440f635fa 227 PIRSF PIRSF004848 1 227 2.0E-76 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Patl_3718 5f61f3f95f958951281be9b440f635fa 227 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Patl_3718 5f61f3f95f958951281be9b440f635fa 227 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 225 32.897 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Patl_3718 5f61f3f95f958951281be9b440f635fa 227 Gene3D G3DSA:3.20.20.10 1 227 1.6E-82 T 11-10-2018 IPR029066 PLP-binding barrel Patl_3718 5f61f3f95f958951281be9b440f635fa 227 Pfam PF01168 Alanine racemase, N-terminal domain 23 226 1.8E-28 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Patl_1992 0affc13b80cde10ace1c49ab837d50b7 216 Gene3D G3DSA:1.10.1710.10 1 122 1.9E-23 T 11-10-2018 IPR036442 ProQ/FinO domain superfamily Patl_1992 0affc13b80cde10ace1c49ab837d50b7 216 SMART SM00945 5 119 7.0E-63 T 11-10-2018 IPR016103 ProQ/FinO domain Patl_1992 0affc13b80cde10ace1c49ab837d50b7 216 SUPERFAMILY SSF48657 4 119 1.11E-36 T 11-10-2018 IPR036442 ProQ/FinO domain superfamily Patl_1992 0affc13b80cde10ace1c49ab837d50b7 216 Pfam PF04352 ProQ/FINO family 8 115 1.6E-40 T 11-10-2018 IPR016103 ProQ/FinO domain Patl_1992 0affc13b80cde10ace1c49ab837d50b7 216 Pfam PF17516 ProQ C-terminal domain 162 210 1.8E-22 T 11-10-2018 IPR035236 RNA chaperone ProQ, C-terminal Patl_1992 0affc13b80cde10ace1c49ab837d50b7 216 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 212 26.732 T 11-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 Patl_2948 66cf5f0fae3892d231833d2953b25e52 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 101 3.2E-16 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Patl_2948 66cf5f0fae3892d231833d2953b25e52 592 Gene3D G3DSA:3.30.1360.30 271 420 3.7E-194 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Patl_2948 66cf5f0fae3892d231833d2953b25e52 592 Gene3D G3DSA:3.30.930.10 116 580 3.7E-194 T 11-10-2018 Patl_2948 66cf5f0fae3892d231833d2953b25e52 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 556 1.2E-106 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_2948 66cf5f0fae3892d231833d2953b25e52 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.1E-25 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_2948 66cf5f0fae3892d231833d2953b25e52 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.1E-25 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_2948 66cf5f0fae3892d231833d2953b25e52 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 516 530 1.1E-25 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_2948 66cf5f0fae3892d231833d2953b25e52 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 472 488 1.1E-25 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_2948 66cf5f0fae3892d231833d2953b25e52 592 SUPERFAMILY SSF55261 288 419 1.36E-45 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Patl_2948 66cf5f0fae3892d231833d2953b25e52 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 582 33.428 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Patl_2948 66cf5f0fae3892d231833d2953b25e52 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 580 1.0E-256 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Patl_2948 66cf5f0fae3892d231833d2953b25e52 592 SUPERFAMILY SSF50249 1 105 6.48E-35 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_2948 66cf5f0fae3892d231833d2953b25e52 592 SUPERFAMILY SSF55681 108 580 1.43E-102 T 11-10-2018 Patl_2948 66cf5f0fae3892d231833d2953b25e52 592 Gene3D G3DSA:2.40.50.140 1 106 4.3E-35 T 11-10-2018 Patl_2948 66cf5f0fae3892d231833d2953b25e52 592 Pfam PF02938 GAD domain 307 406 6.7E-30 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Patl_3358 964d8b3ecabad76004e660cefd5c2946 245 Pfam PF04338 Protein of unknown function, DUF481 30 244 1.1E-60 T 11-10-2018 IPR007433 Protein of unknown function DUF481 Patl_0979 228278b0d2d89a90454b8fd351841052 412 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Patl_0979 228278b0d2d89a90454b8fd351841052 412 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 396 2.5E-143 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Patl_0979 228278b0d2d89a90454b8fd351841052 412 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Patl_0979 228278b0d2d89a90454b8fd351841052 412 Pfam PF00764 Arginosuccinate synthase 10 396 2.8E-153 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Patl_0979 228278b0d2d89a90454b8fd351841052 412 SUPERFAMILY SSF52402 7 170 1.48E-47 T 11-10-2018 Patl_0979 228278b0d2d89a90454b8fd351841052 412 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 52.056 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Patl_0979 228278b0d2d89a90454b8fd351841052 412 Gene3D G3DSA:3.40.50.620 9 177 1.6E-147 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_0979 228278b0d2d89a90454b8fd351841052 412 SUPERFAMILY SSF69864 177 402 9.81E-89 T 11-10-2018 Patl_0979 228278b0d2d89a90454b8fd351841052 412 Gene3D G3DSA:3.90.1260.10 68 357 1.6E-147 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Patl_0979 228278b0d2d89a90454b8fd351841052 412 Gene3D G3DSA:1.20.5.470 368 403 3.4E-9 T 11-10-2018 Patl_1807 dcca4ce26e1e582712d30c6718bbc741 260 Gene3D G3DSA:3.40.190.10 45 250 2.4E-18 T 11-10-2018 Patl_1807 dcca4ce26e1e582712d30c6718bbc741 260 SMART SM00062 35 254 4.6E-4 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_1807 dcca4ce26e1e582712d30c6718bbc741 260 SUPERFAMILY SSF53850 34 250 1.54E-25 T 11-10-2018 Patl_1807 dcca4ce26e1e582712d30c6718bbc741 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 250 8.5E-17 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_1807 dcca4ce26e1e582712d30c6718bbc741 260 Gene3D G3DSA:3.40.190.10 113 215 2.4E-18 T 11-10-2018 Patl_4305 a899aca14dd498f7ea186a6c23ce745a 212 SUPERFAMILY SSF53335 10 211 9.74E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_4305 a899aca14dd498f7ea186a6c23ce745a 212 PIRSF PIRSF003078 8 212 2.1E-56 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Patl_4305 a899aca14dd498f7ea186a6c23ce745a 212 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 20 208 27.309 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Patl_4305 a899aca14dd498f7ea186a6c23ce745a 212 Pfam PF02527 rRNA small subunit methyltransferase G 27 207 2.3E-59 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Patl_4305 a899aca14dd498f7ea186a6c23ce745a 212 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 34 209 4.7E-55 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Patl_4305 a899aca14dd498f7ea186a6c23ce745a 212 Gene3D G3DSA:3.40.50.150 10 212 8.0E-64 T 11-10-2018 Patl_3333 ffe2550d9e2a7c6445c31587a5b372c8 275 SUPERFAMILY SSF50182 107 172 1.18E-17 T 11-10-2018 IPR010920 LSM domain superfamily Patl_3333 ffe2550d9e2a7c6445c31587a5b372c8 275 SUPERFAMILY SSF82689 175 272 5.49E-36 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Patl_3333 ffe2550d9e2a7c6445c31587a5b372c8 275 Pfam PF00924 Mechanosensitive ion channel 64 261 1.4E-54 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Patl_3333 ffe2550d9e2a7c6445c31587a5b372c8 275 Gene3D G3DSA:3.30.70.100 172 266 7.6E-30 T 11-10-2018 Patl_3333 ffe2550d9e2a7c6445c31587a5b372c8 275 Gene3D G3DSA:2.30.30.60 122 171 9.1E-21 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Patl_3333 ffe2550d9e2a7c6445c31587a5b372c8 275 SUPERFAMILY SSF82861 21 105 1.15E-17 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 Gene3D G3DSA:1.20.1640.10 523 1034 4.0E-229 T 11-10-2018 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 Gene3D G3DSA:3.30.70.1430 56 825 4.0E-229 T 11-10-2018 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 SUPERFAMILY SSF82866 814 1038 1.83E-42 T 11-10-2018 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 Gene3D G3DSA:3.30.70.1440 684 874 4.0E-229 T 11-10-2018 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 SUPERFAMILY SSF82866 308 504 1.11E-29 T 11-10-2018 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 SUPERFAMILY SSF82693 160 339 3.14E-8 T 11-10-2018 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 Gene3D G3DSA:3.30.70.1430 584 683 4.0E-229 T 11-10-2018 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 SUPERFAMILY SSF82714 740 813 2.22E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 SUPERFAMILY SSF82714 194 277 2.09E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 Gene3D G3DSA:3.30.2090.10 191 284 4.0E-229 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 5.4E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 5.4E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 PRINTS PR00702 Acriflavin resistance protein family signature 345 368 5.4E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 PRINTS PR00702 Acriflavin resistance protein family signature 401 425 5.4E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 PRINTS PR00702 Acriflavin resistance protein family signature 26 50 5.4E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 PRINTS PR00702 Acriflavin resistance protein family signature 54 72 5.4E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 Gene3D G3DSA:1.20.1640.10 27 522 4.0E-229 T 11-10-2018 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 SUPERFAMILY SSF82693 57 146 2.62E-14 T 11-10-2018 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 Gene3D G3DSA:3.30.70.1320 149 339 4.0E-229 T 11-10-2018 Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 Gene3D G3DSA:3.30.2090.10 730 817 4.0E-229 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_3597 f63315b5b706add372b2b7a56317fae1 1068 Pfam PF00873 AcrB/AcrD/AcrF family 20 1035 2.1E-144 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_1783 488dbc6aee60073b50db4e2084d0bd9e 254 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 251 46.619 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Patl_1783 488dbc6aee60073b50db4e2084d0bd9e 254 SUPERFAMILY SSF53448 1 246 1.6E-59 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_1783 488dbc6aee60073b50db4e2084d0bd9e 254 Pfam PF02348 Cytidylyltransferase 5 224 7.7E-65 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 Patl_1783 488dbc6aee60073b50db4e2084d0bd9e 254 Gene3D G3DSA:3.90.550.10 1 248 9.1E-89 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_1783 488dbc6aee60073b50db4e2084d0bd9e 254 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 244 4.4E-109 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 Patl_4214 1560c6a9376dddbfbd85c82b07f4d690 99 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.9E-21 T 11-10-2018 Patl_4214 1560c6a9376dddbfbd85c82b07f4d690 99 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.9E-21 T 11-10-2018 Patl_4214 1560c6a9376dddbfbd85c82b07f4d690 99 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.9E-21 T 11-10-2018 Patl_4214 1560c6a9376dddbfbd85c82b07f4d690 99 Pfam PF02416 mttA/Hcf106 family 4 52 8.0E-8 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Patl_4214 1560c6a9376dddbfbd85c82b07f4d690 99 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 81 8.0E-30 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Patl_4214 1560c6a9376dddbfbd85c82b07f4d690 99 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 99 13.461 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 Patl_1784 127c0a571c0c6bcb414fcd55864afc13 332 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 317 9.3E-43 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Patl_1784 127c0a571c0c6bcb414fcd55864afc13 332 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 9 328 3.2E-91 T 11-10-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 Patl_1784 127c0a571c0c6bcb414fcd55864afc13 332 PIRSF PIRSF006278 1 332 4.0E-91 T 11-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase Patl_1784 127c0a571c0c6bcb414fcd55864afc13 332 Gene3D G3DSA:3.40.50.1100 14 323 4.6E-110 T 11-10-2018 Patl_1784 127c0a571c0c6bcb414fcd55864afc13 332 Gene3D G3DSA:3.40.50.1100 48 150 4.6E-110 T 11-10-2018 Patl_1784 127c0a571c0c6bcb414fcd55864afc13 332 SUPERFAMILY SSF53686 9 329 1.92E-75 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Patl_3956 4103d9b9b1908e23832da1345ace459e 107 Pfam PF01340 Met Apo-repressor, MetJ 6 102 3.8E-60 T 11-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 Patl_3956 4103d9b9b1908e23832da1345ace459e 107 SUPERFAMILY SSF47598 6 105 5.78E-55 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Patl_3956 4103d9b9b1908e23832da1345ace459e 107 Gene3D G3DSA:1.10.140.10 5 107 1.5E-54 T 11-10-2018 IPR023453 Methionine repressor MetJ domain superfamily Patl_3956 4103d9b9b1908e23832da1345ace459e 107 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 14 102 1.0E-47 T 11-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 Patl_1223 5dfed5d6f272374b7ddc639a229c1052 349 Pfam PF07885 Ion channel 24 100 6.0E-12 T 11-10-2018 IPR013099 Potassium channel domain Patl_1223 5dfed5d6f272374b7ddc639a229c1052 349 Gene3D G3DSA:1.10.287.70 1 101 1.3E-14 T 11-10-2018 Patl_1223 5dfed5d6f272374b7ddc639a229c1052 349 SUPERFAMILY SSF51735 118 242 1.87E-9 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1223 5dfed5d6f272374b7ddc639a229c1052 349 Gene3D G3DSA:3.40.50.720 109 234 1.1E-11 T 11-10-2018 Patl_1223 5dfed5d6f272374b7ddc639a229c1052 349 SUPERFAMILY SSF81324 7 130 1.14E-18 T 11-10-2018 Patl_2628 d0719ec065cf9ec72942fcae64c28413 237 SUPERFAMILY SSF50249 1 67 4.16E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_2628 d0719ec065cf9ec72942fcae64c28413 237 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 8.1E-12 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_2628 d0719ec065cf9ec72942fcae64c28413 237 Gene3D G3DSA:2.40.50.140 1 83 6.1E-16 T 11-10-2018 Patl_2628 d0719ec065cf9ec72942fcae64c28413 237 SMART SM00357 4 68 5.8E-11 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Patl_2628 d0719ec065cf9ec72942fcae64c28413 237 Pfam PF06961 Protein of unknown function (DUF1294) 137 191 2.8E-23 T 11-10-2018 IPR010718 Protein of unknown function DUF1294 Patl_1437 902974e1808d149aff0ed380d0844d5e 108 SUPERFAMILY SSF103481 5 106 6.67E-18 T 11-10-2018 Patl_1437 902974e1808d149aff0ed380d0844d5e 108 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.3E-19 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Patl_1437 902974e1808d149aff0ed380d0844d5e 108 Gene3D G3DSA:1.10.3730.20 1 108 6.9E-29 T 11-10-2018 Patl_1723 d7ee9de5ea960d218114a7be20048446 868 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 176 9.3E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1723 d7ee9de5ea960d218114a7be20048446 868 SUPERFAMILY SSF56935 44 859 3.26E-106 T 11-10-2018 Patl_1723 d7ee9de5ea960d218114a7be20048446 868 Pfam PF00593 TonB dependent receptor 378 860 9.1E-35 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1723 d7ee9de5ea960d218114a7be20048446 868 Gene3D G3DSA:2.170.130.10 39 180 1.4E-30 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_1973 f568356406d5514a633dfcf85f870763 421 SMART SM00364 83 102 0.96 T 11-10-2018 Patl_1973 f568356406d5514a633dfcf85f870763 421 SMART SM00364 128 147 87.0 T 11-10-2018 Patl_1973 f568356406d5514a633dfcf85f870763 421 SMART SM00364 60 79 85.0 T 11-10-2018 Patl_1973 f568356406d5514a633dfcf85f870763 421 SMART SM00364 151 170 43.0 T 11-10-2018 Patl_1973 f568356406d5514a633dfcf85f870763 421 Gene3D G3DSA:3.30.200.20 216 307 8.5E-10 T 11-10-2018 Patl_1973 f568356406d5514a633dfcf85f870763 421 Gene3D G3DSA:3.80.10.10 128 215 4.5E-14 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily Patl_1973 f568356406d5514a633dfcf85f870763 421 SUPERFAMILY SSF52058 16 211 1.29E-32 T 11-10-2018 Patl_1973 f568356406d5514a633dfcf85f870763 421 Gene3D G3DSA:3.80.10.10 9 127 2.3E-16 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily Patl_1973 f568356406d5514a633dfcf85f870763 421 Gene3D G3DSA:1.10.510.10 330 417 2.8E-9 T 11-10-2018 Patl_1973 f568356406d5514a633dfcf85f870763 421 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 234 261 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Patl_1973 f568356406d5514a633dfcf85f870763 421 SMART SM00220 228 420 0.001 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Patl_1973 f568356406d5514a633dfcf85f870763 421 SUPERFAMILY SSF56112 227 397 3.91E-25 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Patl_1973 f568356406d5514a633dfcf85f870763 421 Pfam PF13855 Leucine rich repeat 130 187 3.5E-7 T 11-10-2018 IPR001611 Leucine-rich repeat GO:0005515 Patl_1973 f568356406d5514a633dfcf85f870763 421 Pfam PF00069 Protein kinase domain 228 393 8.5E-17 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Patl_1973 f568356406d5514a633dfcf85f870763 421 SMART SM00369 127 151 69.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype Patl_1973 f568356406d5514a633dfcf85f870763 421 SMART SM00369 174 197 33.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype Patl_1973 f568356406d5514a633dfcf85f870763 421 SMART SM00369 83 106 0.54 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype Patl_1973 f568356406d5514a633dfcf85f870763 421 SMART SM00369 63 82 8.8 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype Patl_1973 f568356406d5514a633dfcf85f870763 421 SMART SM00369 152 173 190.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype Patl_0314 519f191a440a4f324ec3a8487a624f7a 322 Gene3D G3DSA:1.10.10.60 267 321 1.3E-14 T 11-10-2018 Patl_0314 519f191a440a4f324ec3a8487a624f7a 322 SMART SM00342 233 316 1.7E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_0314 519f191a440a4f324ec3a8487a624f7a 322 SUPERFAMILY SSF46689 217 268 4.48E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0314 519f191a440a4f324ec3a8487a624f7a 322 Pfam PF01965 DJ-1/PfpI family 33 173 2.4E-12 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Patl_0314 519f191a440a4f324ec3a8487a624f7a 322 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 270 312 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Patl_0314 519f191a440a4f324ec3a8487a624f7a 322 SUPERFAMILY SSF46689 269 320 3.23E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0314 519f191a440a4f324ec3a8487a624f7a 322 Gene3D G3DSA:1.10.10.60 209 266 1.3E-11 T 11-10-2018 Patl_0314 519f191a440a4f324ec3a8487a624f7a 322 SUPERFAMILY SSF52317 3 197 2.86E-31 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_0314 519f191a440a4f324ec3a8487a624f7a 322 Pfam PF12833 Helix-turn-helix domain 239 318 9.3E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_0314 519f191a440a4f324ec3a8487a624f7a 322 Gene3D G3DSA:3.40.50.880 2 201 7.8E-39 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_0463 52c1475664787e113b808b7e92c5f4a8 552 Gene3D G3DSA:3.10.310.70 97 214 3.7E-133 T 11-10-2018 Patl_0463 52c1475664787e113b808b7e92c5f4a8 552 Gene3D G3DSA:3.20.20.140 79 505 3.7E-133 T 11-10-2018 Patl_0463 52c1475664787e113b808b7e92c5f4a8 552 SUPERFAMILY SSF51338 20 547 1.79E-13 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Patl_0463 52c1475664787e113b808b7e92c5f4a8 552 Gene3D G3DSA:2.30.40.10 40 523 3.7E-133 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Patl_0463 52c1475664787e113b808b7e92c5f4a8 552 SUPERFAMILY SSF51556 78 506 2.18E-33 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_0463 52c1475664787e113b808b7e92c5f4a8 552 Pfam PF07969 Amidohydrolase family 68 543 5.9E-93 T 11-10-2018 IPR013108 Amidohydrolase 3 Patl_2168 0ea94ed9b68b564c896adb4589e2537d 395 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 395 70.4 T 11-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 Patl_2168 0ea94ed9b68b564c896adb4589e2537d 395 Gene3D G3DSA:2.30.130.10 1 72 9.3E-29 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 Patl_2168 0ea94ed9b68b564c896adb4589e2537d 395 SUPERFAMILY SSF53335 79 391 1.77E-71 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_2168 0ea94ed9b68b564c896adb4589e2537d 395 Gene3D G3DSA:3.40.50.150 182 395 2.0E-69 T 11-10-2018 Patl_2168 0ea94ed9b68b564c896adb4589e2537d 395 Gene3D G3DSA:3.30.750.80 73 181 4.2E-36 T 11-10-2018 Patl_2168 0ea94ed9b68b564c896adb4589e2537d 395 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 169 375 6.4E-25 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 Patl_2168 0ea94ed9b68b564c896adb4589e2537d 395 SUPERFAMILY SSF88697 4 72 4.9E-17 T 11-10-2018 IPR015947 PUA-like superfamily Patl_2168 0ea94ed9b68b564c896adb4589e2537d 395 SMART SM00359 3 88 3.6E-11 T 11-10-2018 IPR002478 PUA domain GO:0003723 Patl_3159 bcb06a9f94f266135b243d27b7f76309 83 Gene3D G3DSA:1.10.150.250 1 83 8.2E-31 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily Patl_3159 bcb06a9f94f266135b243d27b7f76309 83 Pfam PF03937 Flavinator of succinate dehydrogenase 8 77 1.0E-24 T 11-10-2018 IPR005631 Flavinator of succinate dehydrogenase Patl_3159 bcb06a9f94f266135b243d27b7f76309 83 SUPERFAMILY SSF109910 3 79 1.96E-24 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily Patl_0234 8938746bd74888f457a7def029cd7cce 146 SUPERFAMILY SSF54523 36 141 4.29E-35 T 11-10-2018 Patl_0234 8938746bd74888f457a7def029cd7cce 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 1.3E-17 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Patl_0234 8938746bd74888f457a7def029cd7cce 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 1.3E-17 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Patl_0234 8938746bd74888f457a7def029cd7cce 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 5.3E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0234 8938746bd74888f457a7def029cd7cce 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0234 8938746bd74888f457a7def029cd7cce 146 Pfam PF08334 Type II secretion system (T2SS), protein G 34 139 3.4E-34 T 11-10-2018 IPR013545 Type II secretion system protein G Patl_0234 8938746bd74888f457a7def029cd7cce 146 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 30 5.4E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0234 8938746bd74888f457a7def029cd7cce 146 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 140 7.8E-49 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 Patl_0234 8938746bd74888f457a7def029cd7cce 146 Gene3D G3DSA:3.30.700.10 24 139 8.5E-34 T 11-10-2018 Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 SUPERFAMILY SSF49373 266 337 1.06E-12 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 SMART SM00634 252 338 5.4E-5 T 11-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 SMART SM00634 440 527 0.059 T 11-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 SMART SM00634 157 249 0.035 T 11-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 SMART SM00634 342 429 0.28 T 11-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 SMART SM00634 48 143 0.011 T 11-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 Gene3D G3DSA:2.60.40.10 347 436 2.2E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 Gene3D G3DSA:2.60.40.10 442 533 7.0E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 Gene3D G3DSA:2.60.40.10 250 339 9.2E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 Gene3D G3DSA:2.60.40.10 41 145 2.7E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 Gene3D G3DSA:2.60.40.10 150 249 1.5E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 SUPERFAMILY SSF49373 64 145 8.63E-6 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 SUPERFAMILY SSF49373 354 422 4.91E-8 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 SUPERFAMILY SSF49373 440 535 2.35E-8 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 Pfam PF02369 Bacterial Ig-like domain (group 1) 265 333 6.7E-9 T 11-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 Pfam PF02369 Bacterial Ig-like domain (group 1) 452 510 3.5E-9 T 11-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Patl_2358 2905fece1a9d262130ac28c6babfe2f1 727 SUPERFAMILY SSF49373 159 250 1.91E-10 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Patl_4280 2b6200cf4ae2a03f252e085e81ded339 83 Pfam PF01206 Sulfurtransferase TusA 11 80 2.4E-22 T 11-10-2018 IPR001455 TusA-like domain Patl_4280 2b6200cf4ae2a03f252e085e81ded339 83 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 4 82 25.659 T 11-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 Patl_4280 2b6200cf4ae2a03f252e085e81ded339 83 SUPERFAMILY SSF64307 8 80 2.62E-24 T 11-10-2018 IPR036868 TusA-like domain superfamily Patl_4280 2b6200cf4ae2a03f252e085e81ded339 83 Gene3D G3DSA:3.30.110.40 2 81 3.8E-27 T 11-10-2018 IPR036868 TusA-like domain superfamily Patl_4280 2b6200cf4ae2a03f252e085e81ded339 83 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 13 37 - T 11-10-2018 IPR001455 TusA-like domain Patl_1779 26d9c1e63801b12963dca30f02105389 762 Pfam PF00753 Metallo-beta-lactamase superfamily 522 590 2.7E-5 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_1779 26d9c1e63801b12963dca30f02105389 762 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 231 419 1.9E-21 T 11-10-2018 IPR004477 ComEC/Rec2-related protein Patl_1779 26d9c1e63801b12963dca30f02105389 762 SMART SM00849 524 702 0.0034 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_1779 26d9c1e63801b12963dca30f02105389 762 Pfam PF13567 Domain of unknown function (DUF4131) 18 177 3.6E-20 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 Patl_1779 26d9c1e63801b12963dca30f02105389 762 Gene3D G3DSA:3.60.15.10 512 748 5.2E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_1779 26d9c1e63801b12963dca30f02105389 762 Pfam PF03772 Competence protein 210 488 1.5E-55 T 11-10-2018 IPR004477 ComEC/Rec2-related protein Patl_1779 26d9c1e63801b12963dca30f02105389 762 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 107 731 3.4E-110 T 11-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 Patl_1779 26d9c1e63801b12963dca30f02105389 762 SUPERFAMILY SSF56281 512 755 6.5E-42 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_2657 baa2eac82bf82be077a5eeb385a43060 423 Pfam PF00331 Glycosyl hydrolase family 10 77 418 1.2E-107 T 11-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Patl_2657 baa2eac82bf82be077a5eeb385a43060 423 SUPERFAMILY SSF51445 72 420 2.32E-109 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_2657 baa2eac82bf82be077a5eeb385a43060 423 PRINTS PR00134 Glycosyl hydrolase family 10 signature 152 164 2.6E-17 T 11-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Patl_2657 baa2eac82bf82be077a5eeb385a43060 423 PRINTS PR00134 Glycosyl hydrolase family 10 signature 272 284 2.6E-17 T 11-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Patl_2657 baa2eac82bf82be077a5eeb385a43060 423 PRINTS PR00134 Glycosyl hydrolase family 10 signature 200 211 2.6E-17 T 11-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Patl_2657 baa2eac82bf82be077a5eeb385a43060 423 PRINTS PR00134 Glycosyl hydrolase family 10 signature 244 255 2.6E-17 T 11-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Patl_2657 baa2eac82bf82be077a5eeb385a43060 423 Gene3D G3DSA:3.20.20.80 77 421 9.9E-124 T 11-10-2018 Patl_2657 baa2eac82bf82be077a5eeb385a43060 423 SMART SM00633 121 421 7.2E-109 T 11-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 Gene3D G3DSA:3.30.2090.10 705 794 1.5E-256 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2235 50918b6938cba7f50cb9373de968d555 1022 Gene3D G3DSA:3.30.70.1440 654 853 1.5E-256 T 11-10-2018 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 Gene3D G3DSA:3.30.70.1430 552 653 1.5E-256 T 11-10-2018 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 SUPERFAMILY SSF82693 134 320 6.28E-15 T 11-10-2018 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 SUPERFAMILY SSF82714 184 264 4.05E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2235 50918b6938cba7f50cb9373de968d555 1022 SUPERFAMILY SSF82866 291 489 4.58E-39 T 11-10-2018 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 Gene3D G3DSA:1.20.1640.10 11 500 1.5E-256 T 11-10-2018 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 SUPERFAMILY SSF82866 795 1012 7.06E-45 T 11-10-2018 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 SUPERFAMILY SSF82693 40 133 1.27E-21 T 11-10-2018 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 Gene3D G3DSA:1.20.1640.10 501 1007 1.5E-256 T 11-10-2018 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 SUPERFAMILY SSF82714 708 790 2.75E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2235 50918b6938cba7f50cb9373de968d555 1022 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 8.3E-30 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 8.3E-30 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 8.3E-30 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 8.3E-30 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 8.3E-30 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 PRINTS PR00702 Acriflavin resistance protein family signature 537 554 8.3E-30 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 8.3E-30 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 4.5E-172 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 Gene3D G3DSA:3.30.70.1430 40 802 1.5E-256 T 11-10-2018 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 Gene3D G3DSA:3.30.70.1320 134 326 1.5E-256 T 11-10-2018 Patl_2235 50918b6938cba7f50cb9373de968d555 1022 Gene3D G3DSA:3.30.2090.10 177 268 1.5E-256 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 Gene3D G3DSA:1.10.287.610 6 71 1.6E-25 T 11-10-2018 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 Gene3D G3DSA:2.20.70.80 396 435 2.6E-19 T 11-10-2018 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 SUPERFAMILY SSF52113 598 672 2.24E-18 T 11-10-2018 IPR036420 BRCT domain superfamily Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 Pfam PF12826 Helix-hairpin-helix motif 515 578 3.7E-22 T 11-10-2018 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 Pfam PF14520 Helix-hairpin-helix domain 451 507 3.6E-6 T 11-10-2018 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 PIRSF PIRSF001604 1 676 1.6E-249 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 Hamap MF_01588 DNA ligase [ligA]. 5 672 52.068 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 597 671 3.3E-13 T 11-10-2018 IPR001357 BRCT domain Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 327 403 4.3E-34 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 Gene3D G3DSA:1.10.150.20 511 590 1.0E-29 T 11-10-2018 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 Gene3D G3DSA:2.40.50.140 323 395 3.1E-33 T 11-10-2018 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 118 147 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 Gene3D G3DSA:3.30.470.90 72 322 6.4E-98 T 11-10-2018 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 SUPERFAMILY SSF56091 6 321 5.76E-116 T 11-10-2018 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 SMART SM00278 520 536 1900.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 SMART SM00278 451 470 27.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 SMART SM00278 549 568 380.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 SMART SM00278 485 504 200.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 SMART SM00532 6 453 1.6E-259 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 SMART SM00292 598 675 9.5E-13 T 11-10-2018 IPR001357 BRCT domain Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 16 668 5.3E-260 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 Gene3D G3DSA:1.10.150.20 437 510 2.4E-28 T 11-10-2018 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 SUPERFAMILY SSF50249 323 404 1.56E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 Gene3D G3DSA:3.40.50.10190 591 675 2.1E-23 T 11-10-2018 IPR036420 BRCT domain superfamily Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 SUPERFAMILY SSF47781 408 588 1.78E-58 T 11-10-2018 IPR010994 RuvA domain 2-like Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 9 323 1.5E-129 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Patl_1776 dbf7cc8424d7b140459ab4f12fe5615d 677 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 413 439 1.0E-9 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 Patl_0625 542250415ace0ac5440dd68d6c1b6b63 165 Gene3D G3DSA:3.30.70.260 1 78 6.2E-33 T 11-10-2018 Patl_0625 542250415ace0ac5440dd68d6c1b6b63 165 SUPERFAMILY SSF55021 79 163 4.58E-24 T 11-10-2018 Patl_0625 542250415ace0ac5440dd68d6c1b6b63 165 Pfam PF13710 ACT domain 11 73 2.9E-17 T 11-10-2018 Patl_0625 542250415ace0ac5440dd68d6c1b6b63 165 Pfam PF10369 Small subunit of acetolactate synthase 84 159 3.1E-24 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Patl_0625 542250415ace0ac5440dd68d6c1b6b63 165 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 160 1.3E-58 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Patl_0625 542250415ace0ac5440dd68d6c1b6b63 165 SUPERFAMILY SSF55021 2 76 9.4E-22 T 11-10-2018 Patl_0625 542250415ace0ac5440dd68d6c1b6b63 165 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 6.0E-37 T 11-10-2018 Patl_0625 542250415ace0ac5440dd68d6c1b6b63 165 Gene3D G3DSA:3.30.70.1150 80 158 5.6E-26 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Patl_2656 0d4f451446af0a77a0bda1937f374ee1 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2656 0d4f451446af0a77a0bda1937f374ee1 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2656 0d4f451446af0a77a0bda1937f374ee1 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2656 0d4f451446af0a77a0bda1937f374ee1 293 SUPERFAMILY SSF53850 89 286 3.8E-20 T 11-10-2018 Patl_2656 0d4f451446af0a77a0bda1937f374ee1 293 Gene3D G3DSA:1.10.10.10 5 68 9.3E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2656 0d4f451446af0a77a0bda1937f374ee1 293 Gene3D G3DSA:3.40.190.290 91 287 1.1E-12 T 11-10-2018 Patl_2656 0d4f451446af0a77a0bda1937f374ee1 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 3.7E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2656 0d4f451446af0a77a0bda1937f374ee1 293 Pfam PF03466 LysR substrate binding domain 89 285 1.8E-22 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_2656 0d4f451446af0a77a0bda1937f374ee1 293 SUPERFAMILY SSF46785 5 82 1.02E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0849 cdf5b7574fd2a532c9df03317afe4ca1 359 Gene3D G3DSA:3.90.850.10 95 347 5.4E-51 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Patl_0849 cdf5b7574fd2a532c9df03317afe4ca1 359 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 105 340 5.5E-59 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Patl_0849 cdf5b7574fd2a532c9df03317afe4ca1 359 SUPERFAMILY SSF56529 98 343 1.06E-48 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Patl_3062 241ac11ce52a1377bb731445c9b5c0b1 352 Gene3D G3DSA:3.90.25.10 190 351 1.9E-53 T 11-10-2018 Patl_3062 241ac11ce52a1377bb731445c9b5c0b1 352 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 7 348 2.0E-142 T 11-10-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 Patl_3062 241ac11ce52a1377bb731445c9b5c0b1 352 SUPERFAMILY SSF51735 7 333 3.82E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3062 241ac11ce52a1377bb731445c9b5c0b1 352 Gene3D G3DSA:3.40.50.720 4 189 6.0E-52 T 11-10-2018 Patl_3062 241ac11ce52a1377bb731445c9b5c0b1 352 Pfam PF16363 GDP-mannose 4,6 dehydratase 14 237 5.5E-35 T 11-10-2018 IPR016040 NAD(P)-binding domain Patl_0268 59f45d5351a4d4d31c43b7b3ab810240 540 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 471 1.4E-117 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Patl_0268 59f45d5351a4d4d31c43b7b3ab810240 540 Gene3D G3DSA:3.40.50.1380 1 201 4.3E-84 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Patl_0268 59f45d5351a4d4d31c43b7b3ab810240 540 Pfam PF02142 MGS-like domain 19 132 7.8E-29 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Patl_0268 59f45d5351a4d4d31c43b7b3ab810240 540 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 540 45.09 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Patl_0268 59f45d5351a4d4d31c43b7b3ab810240 540 SUPERFAMILY SSF53927 231 540 1.5E-132 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Patl_0268 59f45d5351a4d4d31c43b7b3ab810240 540 SMART SM00851 19 132 3.9E-57 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Patl_0268 59f45d5351a4d4d31c43b7b3ab810240 540 SMART SM00798 137 472 4.3E-213 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Patl_0268 59f45d5351a4d4d31c43b7b3ab810240 540 Gene3D G3DSA:3.40.140.20 403 540 5.5E-61 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Patl_0268 59f45d5351a4d4d31c43b7b3ab810240 540 SUPERFAMILY SSF52335 7 197 1.7E-69 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Patl_0268 59f45d5351a4d4d31c43b7b3ab810240 540 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 540 1.6E-247 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Patl_0268 59f45d5351a4d4d31c43b7b3ab810240 540 Gene3D G3DSA:3.40.140.20 227 381 1.9E-57 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Patl_0268 59f45d5351a4d4d31c43b7b3ab810240 540 PIRSF PIRSF000414 1 540 7.1E-224 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 700 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 Gene3D G3DSA:3.30.70.870 413 487 1.9E-32 T 11-10-2018 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 5.4E-34 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 SUPERFAMILY SSF52540 6 287 1.23E-105 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.0E-15 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 Gene3D G3DSA:3.40.50.300 1 299 2.2E-115 T 11-10-2018 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 Hamap MF_00054_B Elongation factor G [fusA]. 6 699 111.587 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 Pfam PF00679 Elongation factor G C-terminus 607 693 2.5E-28 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.3E-18 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.3E-18 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.3E-18 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.3E-18 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.3E-18 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 SMART SM00889 487 605 8.0E-78 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 SUPERFAMILY SSF54211 486 606 4.8E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 SMART SM00838 607 695 9.5E-54 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 Pfam PF03764 Elongation factor G, domain IV 486 605 2.1E-49 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 Gene3D G3DSA:3.30.70.240 611 682 7.3E-92 T 11-10-2018 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 Gene3D G3DSA:2.40.30.10 300 412 2.8E-41 T 11-10-2018 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 Pfam PF14492 Elongation Factor G, domain II 411 485 7.9E-33 T 11-10-2018 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 SUPERFAMILY SSF50447 271 411 1.56E-33 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 1.5E-66 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 SUPERFAMILY SSF54980 411 488 1.83E-24 T 11-10-2018 IPR035647 EF-G domain III/V-like Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 Gene3D G3DSA:3.30.230.10 491 695 7.3E-92 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Patl_0602 a6cd622232678d8d99e7d2407ed0a705 701 SUPERFAMILY SSF54980 610 698 2.16E-28 T 11-10-2018 IPR035647 EF-G domain III/V-like Patl_2596 44450521b0e8bae774ff1569ab1b56bf 337 SUPERFAMILY SSF55347 155 317 3.57E-68 T 11-10-2018 Patl_2596 44450521b0e8bae774ff1569ab1b56bf 337 Gene3D G3DSA:3.40.50.720 5 328 1.7E-143 T 11-10-2018 Patl_2596 44450521b0e8bae774ff1569ab1b56bf 337 SUPERFAMILY SSF51735 1 180 2.82E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2596 44450521b0e8bae774ff1569ab1b56bf 337 SMART SM00846 3 155 5.6E-86 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_2596 44450521b0e8bae774ff1569ab1b56bf 337 Gene3D G3DSA:3.30.360.10 154 318 1.7E-143 T 11-10-2018 Patl_2596 44450521b0e8bae774ff1569ab1b56bf 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 328 1.4E-128 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_2596 44450521b0e8bae774ff1569ab1b56bf 337 PIRSF PIRSF000149 1 337 8.8E-134 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_2596 44450521b0e8bae774ff1569ab1b56bf 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 5.7E-63 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_2596 44450521b0e8bae774ff1569ab1b56bf 337 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_2596 44450521b0e8bae774ff1569ab1b56bf 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 5.8E-37 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_2596 44450521b0e8bae774ff1569ab1b56bf 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 5.8E-37 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_2596 44450521b0e8bae774ff1569ab1b56bf 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 5.8E-37 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_2596 44450521b0e8bae774ff1569ab1b56bf 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 5.8E-37 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_2596 44450521b0e8bae774ff1569ab1b56bf 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 5.8E-37 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_2596 44450521b0e8bae774ff1569ab1b56bf 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 105 1.1E-36 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_0341 9f6019011f1e158cdd7c8e5db3a99e84 240 Gene3D G3DSA:3.40.50.10090 32 160 4.1E-48 T 11-10-2018 Patl_0341 9f6019011f1e158cdd7c8e5db3a99e84 240 Gene3D G3DSA:3.40.50.10090 4 232 4.1E-48 T 11-10-2018 Patl_0341 9f6019011f1e158cdd7c8e5db3a99e84 240 SUPERFAMILY SSF69618 1 237 8.5E-39 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Patl_0341 9f6019011f1e158cdd7c8e5db3a99e84 240 Pfam PF02602 Uroporphyrinogen-III synthase HemD 18 231 2.0E-27 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Patl_4218 4071ae5662212c45cd78f435e9613cd3 631 SMART SM00267 451 625 4.7E-56 T 11-10-2018 IPR000160 GGDEF domain Patl_4218 4071ae5662212c45cd78f435e9613cd3 631 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 458 624 1.1E-46 T 11-10-2018 IPR000160 GGDEF domain Patl_4218 4071ae5662212c45cd78f435e9613cd3 631 Gene3D G3DSA:2.60.40.2380 39 185 1.6E-23 T 11-10-2018 Patl_4218 4071ae5662212c45cd78f435e9613cd3 631 Pfam PF07695 7TM diverse intracellular signalling 191 391 2.0E-38 T 11-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 Patl_4218 4071ae5662212c45cd78f435e9613cd3 631 SUPERFAMILY SSF55073 467 623 9.42E-46 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_4218 4071ae5662212c45cd78f435e9613cd3 631 Pfam PF07696 7TMR-DISM extracellular 2 46 177 5.1E-23 T 11-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 Patl_4218 4071ae5662212c45cd78f435e9613cd3 631 Gene3D G3DSA:3.30.70.270 448 624 1.1E-53 T 11-10-2018 Patl_4218 4071ae5662212c45cd78f435e9613cd3 631 Pfam PF00990 Diguanylate cyclase, GGDEF domain 464 620 3.9E-42 T 11-10-2018 IPR000160 GGDEF domain Patl_1025 0be36fb9435776744fb703870564b63a 469 Gene3D G3DSA:3.30.590.10 105 456 3.4E-147 T 11-10-2018 Patl_1025 0be36fb9435776744fb703870564b63a 469 SUPERFAMILY SSF54368 3 100 8.89E-36 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Patl_1025 0be36fb9435776744fb703870564b63a 469 Gene3D G3DSA:3.10.20.70 2 104 1.4E-40 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Patl_1025 0be36fb9435776744fb703870564b63a 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 468 8.7E-210 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Patl_1025 0be36fb9435776744fb703870564b63a 469 SUPERFAMILY SSF55931 102 468 3.34E-138 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Patl_1025 0be36fb9435776744fb703870564b63a 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 15 95 2.3E-31 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Patl_1025 0be36fb9435776744fb703870564b63a 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Patl_1025 0be36fb9435776744fb703870564b63a 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Patl_1025 0be36fb9435776744fb703870564b63a 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 11-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Patl_1025 0be36fb9435776744fb703870564b63a 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 7.2E-138 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Patl_1025 0be36fb9435776744fb703870564b63a 469 SMART SM01230 102 379 1.2E-148 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Patl_2211 da8f6ff21c116e106e61a75726ec9c9b 293 Pfam PF00892 EamA-like transporter family 2 129 2.5E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Patl_2211 da8f6ff21c116e106e61a75726ec9c9b 293 Pfam PF00892 EamA-like transporter family 146 282 5.7E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Patl_2211 da8f6ff21c116e106e61a75726ec9c9b 293 SUPERFAMILY SSF103481 189 283 1.31E-8 T 11-10-2018 Patl_2211 da8f6ff21c116e106e61a75726ec9c9b 293 SUPERFAMILY SSF103481 32 135 4.32E-13 T 11-10-2018 Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 Gene3D G3DSA:2.60.120.380 607 706 2.9E-10 T 11-10-2018 Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 Gene3D G3DSA:2.60.120.380 719 816 1.4E-7 T 11-10-2018 Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 Gene3D G3DSA:2.60.120.380 279 379 4.8E-11 T 11-10-2018 Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 Gene3D G3DSA:2.60.120.380 498 597 5.5E-10 T 11-10-2018 Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 Gene3D G3DSA:2.60.120.380 388 488 2.8E-10 T 11-10-2018 Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 Gene3D G3DSA:2.60.120.380 54 166 3.4E-12 T 11-10-2018 Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 296 362 3.2E-5 T 11-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 Pfam PF02010 REJ domain 1188 1276 1.7E-10 T 11-10-2018 IPR002859 PKD/REJ-like domain Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 Pfam PF02010 REJ domain 954 1078 1.0E-6 T 11-10-2018 IPR002859 PKD/REJ-like domain Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 Gene3D G3DSA:2.60.40.10 1028 1112 6.1E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 SUPERFAMILY SSF49299 1215 1309 7.06E-5 T 11-10-2018 IPR035986 PKD domain superfamily Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 Gene3D G3DSA:2.60.40.10 824 923 9.7E-18 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 Gene3D G3DSA:2.60.40.10 1218 1312 3.4E-18 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 Gene3D G3DSA:2.60.40.10 924 1022 4.2E-21 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 Gene3D G3DSA:2.60.40.10 1118 1217 8.1E-17 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1317 1329 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 SUPERFAMILY SSF49299 1117 1213 7.85E-6 T 11-10-2018 IPR035986 PKD domain superfamily Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 SMART SM00089 1020 1114 0.3 T 11-10-2018 IPR022409 PKD/Chitinase domain Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 SMART SM00089 928 1013 4.5 T 11-10-2018 IPR022409 PKD/Chitinase domain Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 SMART SM00089 1121 1215 0.093 T 11-10-2018 IPR022409 PKD/Chitinase domain Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 SMART SM00089 1219 1310 1.1 T 11-10-2018 IPR022409 PKD/Chitinase domain Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 SMART SM00089 827 921 1.0 T 11-10-2018 IPR022409 PKD/Chitinase domain Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 SUPERFAMILY SSF49299 824 919 4.12E-5 T 11-10-2018 IPR035986 PKD domain superfamily Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 Gene3D G3DSA:2.60.120.380 172 270 1.8E-9 T 11-10-2018 Patl_1501 249a43a637b09f5a54b388f7a0c5d400 1376 SUPERFAMILY SSF49299 920 1012 1.07E-7 T 11-10-2018 IPR035986 PKD domain superfamily Patl_1298 f7c67df94b8042c35176f6f242a22868 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 139 3.8E-24 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Patl_1298 f7c67df94b8042c35176f6f242a22868 349 Gene3D G3DSA:3.30.360.10 172 345 3.2E-46 T 11-10-2018 Patl_1298 f7c67df94b8042c35176f6f242a22868 349 Gene3D G3DSA:3.40.50.720 4 171 3.8E-46 T 11-10-2018 Patl_1298 f7c67df94b8042c35176f6f242a22868 349 SUPERFAMILY SSF55347 146 310 8.67E-37 T 11-10-2018 Patl_1298 f7c67df94b8042c35176f6f242a22868 349 SUPERFAMILY SSF51735 3 169 2.14E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0948 5ec079c70589f4b4ff6042d23b74d3c8 496 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 480 2.3E-240 T 11-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 Patl_0948 5ec079c70589f4b4ff6042d23b74d3c8 496 SUPERFAMILY SSF53720 2 482 1.83E-146 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_0948 5ec079c70589f4b4ff6042d23b74d3c8 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Patl_0948 5ec079c70589f4b4ff6042d23b74d3c8 496 Gene3D G3DSA:3.40.309.10 249 449 7.2E-144 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Patl_0948 5ec079c70589f4b4ff6042d23b74d3c8 496 Pfam PF00171 Aldehyde dehydrogenase family 13 476 4.4E-140 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Patl_0948 5ec079c70589f4b4ff6042d23b74d3c8 496 Gene3D G3DSA:3.40.605.10 23 457 7.2E-144 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_1074 0cbb6ef3eb4cbd592e41d22e48081990 242 SUPERFAMILY SSF89550 2 209 1.69E-12 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Patl_1074 0cbb6ef3eb4cbd592e41d22e48081990 242 Gene3D G3DSA:3.20.20.140 1 242 1.2E-72 T 11-10-2018 Patl_1074 0cbb6ef3eb4cbd592e41d22e48081990 242 PIRSF PIRSF016557 1 241 5.0E-61 T 11-10-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 Patl_3738 9eab9e2ab19a769e80ad5dc29dde0550 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_3738 9eab9e2ab19a769e80ad5dc29dde0550 103 SUPERFAMILY SSF141091 1 102 9.03E-37 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3738 9eab9e2ab19a769e80ad5dc29dde0550 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.352 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3738 9eab9e2ab19a769e80ad5dc29dde0550 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.0E-43 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3738 9eab9e2ab19a769e80ad5dc29dde0550 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 7.1E-38 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2116 bb49827dd2b07532051da6659ba70af9 300 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 10 195 9.5E-56 T 11-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_2116 bb49827dd2b07532051da6659ba70af9 300 Pfam PF13177 DNA polymerase III, delta subunit 8 164 1.9E-43 T 11-10-2018 Patl_2116 bb49827dd2b07532051da6659ba70af9 300 SUPERFAMILY SSF52540 4 200 6.57E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2116 bb49827dd2b07532051da6659ba70af9 300 Gene3D G3DSA:3.40.50.300 1 166 1.1E-50 T 11-10-2018 Patl_0528 0a8a1c6e581595eb93d36dc09f2d09f5 611 Pfam PF03445 Putative nucleotidyltransferase DUF294 297 431 2.2E-37 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 Patl_0528 0a8a1c6e581595eb93d36dc09f2d09f5 611 SUPERFAMILY SSF51206 5 129 4.84E-15 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like Patl_0528 0a8a1c6e581595eb93d36dc09f2d09f5 611 Gene3D G3DSA:3.10.580.10 142 289 1.6E-28 T 11-10-2018 Patl_0528 0a8a1c6e581595eb93d36dc09f2d09f5 611 Gene3D G3DSA:2.60.120.10 3 133 4.2E-14 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_0528 0a8a1c6e581595eb93d36dc09f2d09f5 611 SUPERFAMILY SSF54631 145 268 9.6E-29 T 11-10-2018 Patl_0528 0a8a1c6e581595eb93d36dc09f2d09f5 611 SMART SM00116 157 204 0.0011 T 11-10-2018 IPR000644 CBS domain Patl_0528 0a8a1c6e581595eb93d36dc09f2d09f5 611 SMART SM00116 221 270 7.3E-11 T 11-10-2018 IPR000644 CBS domain Patl_0528 0a8a1c6e581595eb93d36dc09f2d09f5 611 Pfam PF00571 CBS domain 151 203 2.7E-4 T 11-10-2018 IPR000644 CBS domain Patl_0528 0a8a1c6e581595eb93d36dc09f2d09f5 611 Pfam PF00571 CBS domain 214 268 1.1E-11 T 11-10-2018 IPR000644 CBS domain Patl_0528 0a8a1c6e581595eb93d36dc09f2d09f5 611 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 467 606 5.5E-31 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding Patl_0833 231daf42d51795df71cad11b9fe3b775 545 Gene3D G3DSA:2.60.40.10 31 119 9.2E-17 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0833 231daf42d51795df71cad11b9fe3b775 545 Pfam PF13204 Protein of unknown function (DUF4038) 134 421 6.7E-16 T 11-10-2018 IPR025277 Putative glycohydrolase domain DUF4038 Patl_0833 231daf42d51795df71cad11b9fe3b775 545 Gene3D G3DSA:3.20.20.80 132 444 4.0E-54 T 11-10-2018 Patl_0833 231daf42d51795df71cad11b9fe3b775 545 Pfam PF16586 Domain of unknown function (DUF5060) 34 101 2.4E-15 T 11-10-2018 IPR032260 Domain of unknown function DUF5060 Patl_0833 231daf42d51795df71cad11b9fe3b775 545 SUPERFAMILY SSF51445 138 419 1.92E-8 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_0396 0a1a69f0266d478c7d8942265f1a8510 799 Pfam PF07715 TonB-dependent Receptor Plug Domain 79 173 9.6E-6 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0396 0a1a69f0266d478c7d8942265f1a8510 799 Pfam PF00593 TonB dependent receptor 284 796 2.9E-18 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0396 0a1a69f0266d478c7d8942265f1a8510 799 SUPERFAMILY SSF56935 40 797 3.66E-78 T 11-10-2018 Patl_0396 0a1a69f0266d478c7d8942265f1a8510 799 Gene3D G3DSA:2.170.130.10 71 187 1.6E-10 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_0047 e17f64a1533504f48ce37f6125579fcd 270 Pfam PF00535 Glycosyl transferase family 2 4 102 9.6E-17 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Patl_0047 e17f64a1533504f48ce37f6125579fcd 270 Gene3D G3DSA:3.90.550.10 1 241 1.5E-38 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_0047 e17f64a1533504f48ce37f6125579fcd 270 SUPERFAMILY SSF53448 1 258 4.88E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3525 cd061b4fca7a12d1b714a095c3e57881 586 SUPERFAMILY SSF56519 66 236 8.11E-44 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Patl_3525 cd061b4fca7a12d1b714a095c3e57881 586 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 22 573 45.294 T 11-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Patl_3525 cd061b4fca7a12d1b714a095c3e57881 586 Gene3D G3DSA:3.90.1310.30 62 236 1.2E-42 T 11-10-2018 Patl_3525 cd061b4fca7a12d1b714a095c3e57881 586 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 557 1.7E-68 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Patl_3525 cd061b4fca7a12d1b714a095c3e57881 586 SUPERFAMILY SSF56601 189 569 4.51E-89 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Patl_3525 cd061b4fca7a12d1b714a095c3e57881 586 Gene3D G3DSA:3.30.450.330 238 562 6.4E-107 T 11-10-2018 Patl_3525 cd061b4fca7a12d1b714a095c3e57881 586 Pfam PF03717 Penicillin-binding Protein dimerisation domain 71 221 2.3E-16 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Patl_3525 cd061b4fca7a12d1b714a095c3e57881 586 Gene3D G3DSA:3.40.710.10 298 480 6.4E-107 T 11-10-2018 Patl_0942 45d14d1e097da8ea0c3d3c82bef9dc79 180 PIRSF PIRSF029681 1 180 2.1E-57 T 11-10-2018 IPR018550 Lipid A 3-O-deacylase-related Patl_0942 45d14d1e097da8ea0c3d3c82bef9dc79 180 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 40 178 2.1E-32 T 11-10-2018 IPR018550 Lipid A 3-O-deacylase-related Patl_0942 45d14d1e097da8ea0c3d3c82bef9dc79 180 Gene3D G3DSA:2.40.160.20 33 179 1.9E-37 T 11-10-2018 Patl_0421 2afa71be91323ae0d99239181902c7db 282 Gene3D G3DSA:1.20.120.350 7 121 3.4E-25 T 11-10-2018 IPR027359 Voltage-dependent channel domain superfamily Patl_0421 2afa71be91323ae0d99239181902c7db 282 SUPERFAMILY SSF81324 17 232 9.81E-31 T 11-10-2018 Patl_0421 2afa71be91323ae0d99239181902c7db 282 Gene3D G3DSA:1.10.287.70 122 233 9.8E-32 T 11-10-2018 Patl_0421 2afa71be91323ae0d99239181902c7db 282 Pfam PF00520 Ion transport protein 16 233 1.3E-40 T 11-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 Patl_1312 29798b661fe32ab711525d2bb2c3293d 221 Gene3D G3DSA:2.40.30.20 102 205 1.6E-33 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_1312 29798b661fe32ab711525d2bb2c3293d 221 SUPERFAMILY SSF63380 93 194 4.76E-32 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Patl_1312 29798b661fe32ab711525d2bb2c3293d 221 Gene3D G3DSA:2.40.30.20 1 89 5.8E-27 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_1312 29798b661fe32ab711525d2bb2c3293d 221 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 3.8E-65 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Patl_1312 29798b661fe32ab711525d2bb2c3293d 221 Pfam PF00677 Lumazine binding domain 3 87 4.0E-22 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Patl_1312 29798b661fe32ab711525d2bb2c3293d 221 Pfam PF00677 Lumazine binding domain 100 184 4.6E-23 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Patl_1312 29798b661fe32ab711525d2bb2c3293d 221 SUPERFAMILY SSF63380 1 89 4.51E-26 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Patl_1312 29798b661fe32ab711525d2bb2c3293d 221 PIRSF PIRSF000498 1 212 2.6E-76 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Patl_0103 e140fca030d6790f606f0513c6dd8313 456 Pfam PF05762 VWA domain containing CoxE-like protein 233 443 2.4E-36 T 11-10-2018 IPR008912 Uncharacterised protein family CoxE-like Patl_0103 e140fca030d6790f606f0513c6dd8313 456 PIRSF PIRSF010256 1 455 9.8E-77 T 11-10-2018 IPR011195 Uncharacterised conserved protein UCP010256 Patl_0103 e140fca030d6790f606f0513c6dd8313 456 Gene3D G3DSA:3.40.50.410 288 412 1.3E-5 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Patl_0103 e140fca030d6790f606f0513c6dd8313 456 SUPERFAMILY SSF53300 289 452 1.05E-9 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 Pfam PF03707 Bacterial signalling protein N terminal repeat 102 158 1.7E-15 T 11-10-2018 IPR005330 MHYT domain Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 Pfam PF03707 Bacterial signalling protein N terminal repeat 165 211 1.9E-11 T 11-10-2018 IPR005330 MHYT domain Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 Pfam PF03707 Bacterial signalling protein N terminal repeat 235 289 5.9E-8 T 11-10-2018 IPR005330 MHYT domain Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 SMART SM00086 507 549 7.5E-4 T 11-10-2018 IPR001610 PAC motif Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 SUPERFAMILY SSF47384 553 635 7.26E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 Pfam PF08447 PAS fold 458 538 1.6E-12 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 SUPERFAMILY SSF55785 454 552 2.74E-16 T 11-10-2018 IPR035965 PAS domain superfamily Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 SMART SM00387 681 793 1.0E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 777 790 6.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 718 732 6.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 753 771 6.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 736 746 6.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 429 556 3.4E-10 T 11-10-2018 IPR000014 PAS domain Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 304 428 2.5E-17 T 11-10-2018 IPR000014 PAS domain Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 Gene3D G3DSA:3.40.50.2300 809 932 5.2E-34 T 11-10-2018 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 SMART SM00448 812 928 2.1E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 Gene3D G3DSA:1.20.120.160 944 1059 1.8E-6 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 Gene3D G3DSA:1.10.287.130 546 632 1.1E-24 T 11-10-2018 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 SUPERFAMILY SSF52172 810 933 1.71E-31 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 SMART SM00388 569 634 4.4E-22 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 683 792 8.8E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 Gene3D G3DSA:3.30.450.20 431 545 3.2E-20 T 11-10-2018 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 Pfam PF00989 PAS fold 307 417 4.1E-8 T 11-10-2018 IPR013767 PAS fold GO:0006355 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 SMART SM00091 433 505 1.8E-4 T 11-10-2018 IPR000014 PAS domain Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 SMART SM00091 306 372 1.3E-7 T 11-10-2018 IPR000014 PAS domain Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 Gene3D G3DSA:3.30.450.20 302 421 3.0E-20 T 11-10-2018 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 SUPERFAMILY SSF47226 911 1050 2.49E-10 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 Gene3D G3DSA:3.30.565.10 633 793 1.4E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 SUPERFAMILY SSF55785 317 430 2.58E-16 T 11-10-2018 IPR035965 PAS domain superfamily Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 Pfam PF00072 Response regulator receiver domain 815 925 1.3E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 570 634 8.7E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2249 1da7079645c5e5e62eb9c935960538b5 1143 SUPERFAMILY SSF55874 623 796 1.19E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3967 d1204a32561af1ddcfbba87cab06baf2 124 Pfam PF08000 Bacterial PH domain 3 121 4.0E-45 T 11-10-2018 IPR012544 Bacterial Pleckstrin homology domain Patl_3967 d1204a32561af1ddcfbba87cab06baf2 124 SUPERFAMILY SSF50729 7 123 3.07E-41 T 11-10-2018 Patl_3967 d1204a32561af1ddcfbba87cab06baf2 124 Gene3D G3DSA:2.30.29.50 1 124 5.3E-47 T 11-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily Patl_2008 d57cb26f94c483ede95bed5fb6273727 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 29.861 T 11-10-2018 IPR007040 Ribosome modulation factor Patl_2008 d57cb26f94c483ede95bed5fb6273727 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 3.0E-23 T 11-10-2018 IPR007040 Ribosome modulation factor Patl_2008 d57cb26f94c483ede95bed5fb6273727 57 Gene3D G3DSA:1.10.10.620 1 56 1.8E-27 T 11-10-2018 IPR023200 Ribosome modulation factor domain superfamily Patl_2008 d57cb26f94c483ede95bed5fb6273727 57 Pfam PF04957 Ribosome modulation factor 1 54 4.4E-29 T 11-10-2018 IPR007040 Ribosome modulation factor Patl_2057 adb692d1be81e30be9a6888de28570f6 272 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 74 3.4E-12 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Patl_2057 adb692d1be81e30be9a6888de28570f6 272 Gene3D G3DSA:3.40.50.10490 90 267 3.4E-17 T 11-10-2018 Patl_2057 adb692d1be81e30be9a6888de28570f6 272 Pfam PF01380 SIS domain 119 201 8.2E-7 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Patl_2057 adb692d1be81e30be9a6888de28570f6 272 SUPERFAMILY SSF46689 5 81 5.2E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_2057 adb692d1be81e30be9a6888de28570f6 272 SUPERFAMILY SSF53697 93 226 4.89E-8 T 11-10-2018 Patl_2057 adb692d1be81e30be9a6888de28570f6 272 Gene3D G3DSA:1.10.10.10 2 79 8.6E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0429 fb4eff2c01bf7737a49bcc545ceede68 537 Gene3D G3DSA:3.50.50.60 470 533 5.9E-15 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0429 fb4eff2c01bf7737a49bcc545ceede68 537 Gene3D G3DSA:3.50.50.60 85 299 1.6E-84 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0429 fb4eff2c01bf7737a49bcc545ceede68 537 SUPERFAMILY SSF51905 100 528 1.12E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0429 fb4eff2c01bf7737a49bcc545ceede68 537 PIRSF PIRSF038984 1 535 9.1E-237 T 11-10-2018 IPR028348 FAD dependent protein Patl_0429 fb4eff2c01bf7737a49bcc545ceede68 537 Gene3D G3DSA:3.30.70.2700 1 80 1.6E-25 T 11-10-2018 Patl_2247 460ac2f24fd501bea22b46fffd07fa74 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 271 300 4.0E-19 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Patl_2247 460ac2f24fd501bea22b46fffd07fa74 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 406 4.0E-19 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Patl_2247 460ac2f24fd501bea22b46fffd07fa74 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 348 375 4.0E-19 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Patl_2247 460ac2f24fd501bea22b46fffd07fa74 511 Pfam PF08447 PAS fold 33 115 2.1E-14 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Patl_2247 460ac2f24fd501bea22b46fffd07fa74 511 Gene3D G3DSA:1.10.287.950 199 510 2.5E-55 T 11-10-2018 Patl_2247 460ac2f24fd501bea22b46fffd07fa74 511 SUPERFAMILY SSF55785 21 115 4.19E-26 T 11-10-2018 IPR035965 PAS domain superfamily Patl_2247 460ac2f24fd501bea22b46fffd07fa74 511 Gene3D G3DSA:3.30.450.20 15 138 1.4E-24 T 11-10-2018 Patl_2247 460ac2f24fd501bea22b46fffd07fa74 511 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 114 3.9E-14 T 11-10-2018 IPR000014 PAS domain Patl_2247 460ac2f24fd501bea22b46fffd07fa74 511 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 314 477 7.5E-38 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_2247 460ac2f24fd501bea22b46fffd07fa74 511 SUPERFAMILY SSF58104 256 504 9.16E-63 T 11-10-2018 Patl_2247 460ac2f24fd501bea22b46fffd07fa74 511 SMART SM00283 250 511 6.3E-50 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_3517 a93884ee1376ff1020911dca5be19d3f 318 SUPERFAMILY SSF56059 111 315 4.6E-50 T 11-10-2018 Patl_3517 a93884ee1376ff1020911dca5be19d3f 318 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 19 317 1.1E-99 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_3517 a93884ee1376ff1020911dca5be19d3f 318 Pfam PF07478 D-ala D-ala ligase C-terminus 118 309 5.4E-57 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_3517 a93884ee1376ff1020911dca5be19d3f 318 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 78 89 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_3517 a93884ee1376ff1020911dca5be19d3f 318 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 18 318 33.433 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_3517 a93884ee1376ff1020911dca5be19d3f 318 Gene3D G3DSA:3.30.470.20 100 309 1.2E-70 T 11-10-2018 Patl_3517 a93884ee1376ff1020911dca5be19d3f 318 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 260 288 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_3517 a93884ee1376ff1020911dca5be19d3f 318 Gene3D G3DSA:3.30.1490.20 126 195 1.2E-70 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Patl_3517 a93884ee1376ff1020911dca5be19d3f 318 SUPERFAMILY SSF52440 19 111 5.28E-28 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Patl_3517 a93884ee1376ff1020911dca5be19d3f 318 PIRSF PIRSF039102 16 60 6.5E-8 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_3517 a93884ee1376ff1020911dca5be19d3f 318 PIRSF PIRSF039102 50 318 1.2E-80 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_3517 a93884ee1376ff1020911dca5be19d3f 318 Pfam PF01820 D-ala D-ala ligase N-terminus 19 100 1.9E-16 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_3517 a93884ee1376ff1020911dca5be19d3f 318 Gene3D G3DSA:3.40.50.20 5 99 3.7E-29 T 11-10-2018 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 PRINTS PR00906 SecA protein signature 170 190 2.3E-73 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 PRINTS PR00906 SecA protein signature 413 426 2.3E-73 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 PRINTS PR00906 SecA protein signature 376 393 2.3E-73 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 PRINTS PR00906 SecA protein signature 101 115 2.3E-73 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 PRINTS PR00906 SecA protein signature 117 127 2.3E-73 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 PRINTS PR00906 SecA protein signature 63 87 2.3E-73 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 PRINTS PR00906 SecA protein signature 339 361 2.3E-73 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.916 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 Gene3D G3DSA:3.40.50.300 22 415 3.1E-176 T 11-10-2018 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 Pfam PF02810 SEC-C motif 889 907 1.3E-10 T 11-10-2018 IPR004027 SEC-C motif Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 Gene3D G3DSA:1.10.3060.10 621 833 2.8E-78 T 11-10-2018 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 SUPERFAMILY SSF81767 227 368 6.93E-43 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 SUPERFAMILY SSF52540 5 415 6.27E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 SMART SM00957 6 402 0.0 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 Pfam PF07516 SecA Wing and Scaffold domain 617 830 1.5E-69 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 SMART SM00958 228 358 4.9E-80 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 Gene3D G3DSA:3.90.1440.10 229 368 3.1E-176 T 11-10-2018 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 SUPERFAMILY SSF52540 417 618 2.26E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 Gene3D G3DSA:3.40.50.300 417 620 2.6E-89 T 11-10-2018 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 Pfam PF07517 SecA DEAD-like domain 7 402 5.2E-133 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 SUPERFAMILY SSF81886 620 897 1.1E-85 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 ProSitePatterns PS01312 SecA family signature. 500 515 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Patl_3511 81269cf03d2af089ecba2b9cc7a091c0 909 Pfam PF01043 SecA preprotein cross-linking domain 232 358 1.9E-39 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Patl_0618 ebbaa2c67f9211632095f95d4d63bc1b 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 277 3.3E-25 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Patl_0618 ebbaa2c67f9211632095f95d4d63bc1b 387 Gene3D G3DSA:2.40.50.100 80 208 1.4E-51 T 11-10-2018 Patl_0618 ebbaa2c67f9211632095f95d4d63bc1b 387 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 56 358 3.0E-48 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Patl_0618 ebbaa2c67f9211632095f95d4d63bc1b 387 Gene3D G3DSA:2.40.420.20 289 356 1.4E-51 T 11-10-2018 Patl_0618 ebbaa2c67f9211632095f95d4d63bc1b 387 Gene3D G3DSA:2.40.30.170 67 288 1.4E-51 T 11-10-2018 Patl_0618 ebbaa2c67f9211632095f95d4d63bc1b 387 SUPERFAMILY SSF111369 69 279 2.62E-33 T 11-10-2018 Patl_0618 ebbaa2c67f9211632095f95d4d63bc1b 387 Gene3D G3DSA:1.10.287.470 115 174 1.4E-51 T 11-10-2018 Patl_2467 eb101cd75b080af7aa1a82c8c18769d4 225 SUPERFAMILY SSF52540 5 219 9.84E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2467 eb101cd75b080af7aa1a82c8c18769d4 225 Pfam PF02224 Cytidylate kinase 7 219 5.4E-77 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Patl_2467 eb101cd75b080af7aa1a82c8c18769d4 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 217 2.4E-81 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Patl_2467 eb101cd75b080af7aa1a82c8c18769d4 225 Gene3D G3DSA:3.40.50.300 2 225 1.8E-81 T 11-10-2018 Patl_2467 eb101cd75b080af7aa1a82c8c18769d4 225 Hamap MF_00238 Cytidylate kinase [cmk]. 5 223 34.104 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Patl_3593 9134b07addc7190c94cdfaac2e09fe52 283 SUPERFAMILY SSF46785 4 112 1.36E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3593 9134b07addc7190c94cdfaac2e09fe52 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 60 5.9E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3593 9134b07addc7190c94cdfaac2e09fe52 283 Gene3D G3DSA:3.40.190.10 96 260 1.7E-43 T 11-10-2018 Patl_3593 9134b07addc7190c94cdfaac2e09fe52 283 Pfam PF03466 LysR substrate binding domain 89 242 5.3E-24 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_3593 9134b07addc7190c94cdfaac2e09fe52 283 Gene3D G3DSA:3.40.190.10 163 254 1.7E-43 T 11-10-2018 Patl_3593 9134b07addc7190c94cdfaac2e09fe52 283 SUPERFAMILY SSF53850 90 282 2.58E-25 T 11-10-2018 Patl_3593 9134b07addc7190c94cdfaac2e09fe52 283 Gene3D G3DSA:1.10.10.10 4 91 5.7E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3593 9134b07addc7190c94cdfaac2e09fe52 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.6E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3593 9134b07addc7190c94cdfaac2e09fe52 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.6E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3593 9134b07addc7190c94cdfaac2e09fe52 283 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.6E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SUPERFAMILY SSF48452 17 113 1.08E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 Pfam PF14559 Tetratricopeptide repeat 455 514 2.9E-6 T 11-10-2018 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 Pfam PF14559 Tetratricopeptide repeat 657 720 1.7E-5 T 11-10-2018 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 Pfam PF14559 Tetratricopeptide repeat 866 926 5.2E-7 T 11-10-2018 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 Pfam PF14559 Tetratricopeptide repeat 521 587 1.5E-5 T 11-10-2018 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 Pfam PF07721 Tetratricopeptide repeat 342 365 0.1 T 11-10-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SUPERFAMILY SSF48452 312 431 5.14E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 Gene3D G3DSA:1.25.40.10 830 931 1.0E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SUPERFAMILY SSF48452 653 921 1.11E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 26 912 2.2E-106 T 11-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 Pfam PF04733 Coatomer epsilon subunit 145 219 1.2E-4 T 11-10-2018 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SMART SM00028 646 679 190.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SMART SM00028 578 611 47.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SMART SM00028 476 509 30.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SMART SM00028 510 543 28.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SMART SM00028 442 475 57.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SMART SM00028 129 162 46.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SMART SM00028 714 747 0.027 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SMART SM00028 544 577 0.72 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SMART SM00028 851 884 81.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SMART SM00028 885 918 1.7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SMART SM00028 27 60 98.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SMART SM00028 197 230 12.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SMART SM00028 163 196 0.22 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SMART SM00028 818 850 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 Gene3D G3DSA:1.25.40.10 23 370 7.1E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 Gene3D G3DSA:1.25.40.10 372 704 4.6E-42 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SUPERFAMILY SSF48452 133 253 3.79E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 Gene3D G3DSA:1.25.40.10 705 811 5.2E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1338 e8c567cdf8a1a180adf3ce7ff01d8537 931 SUPERFAMILY SSF48452 443 608 1.9E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1057 00c3a70ce44a795be7ebb99ace5926e3 235 Gene3D G3DSA:3.40.50.1820 23 235 1.6E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1057 00c3a70ce44a795be7ebb99ace5926e3 235 SUPERFAMILY SSF53474 29 170 2.34E-17 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1057 00c3a70ce44a795be7ebb99ace5926e3 235 Pfam PF01674 Lipase (class 2) 31 231 1.2E-19 T 11-10-2018 IPR002918 Lipase EstA/Esterase EstB GO:0016787 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 Patl_3088 072f132e3059b0261746fb29d22f1d83 274 PRINTS PR00207 Flagellin signature 111 134 1.7E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Patl_3088 072f132e3059b0261746fb29d22f1d83 274 PRINTS PR00207 Flagellin signature 76 95 1.7E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Patl_3088 072f132e3059b0261746fb29d22f1d83 274 PRINTS PR00207 Flagellin signature 37 54 1.7E-21 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Patl_3088 072f132e3059b0261746fb29d22f1d83 274 Gene3D G3DSA:1.20.58.1830 239 273 2.0E-43 T 11-10-2018 Patl_3088 072f132e3059b0261746fb29d22f1d83 274 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 7.3E-36 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Patl_3088 072f132e3059b0261746fb29d22f1d83 274 Pfam PF00700 Bacterial flagellin C-terminal helical region 189 273 3.6E-27 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Patl_3088 072f132e3059b0261746fb29d22f1d83 274 SUPERFAMILY SSF64518 1 273 3.4E-88 T 11-10-2018 Patl_3088 072f132e3059b0261746fb29d22f1d83 274 Gene3D G3DSA:1.20.1330.10 182 233 2.0E-43 T 11-10-2018 Patl_3088 072f132e3059b0261746fb29d22f1d83 274 Gene3D G3DSA:1.20.1330.10 44 160 7.3E-49 T 11-10-2018 Patl_3088 072f132e3059b0261746fb29d22f1d83 274 Gene3D G3DSA:2.170.280.10 172 181 2.0E-43 T 11-10-2018 Patl_3084 3a1c20b3a9229eb6cb479b323cc91bb9 146 SUPERFAMILY SSF160214 55 146 1.57E-23 T 11-10-2018 IPR035924 FlaG-like superfamily Patl_3084 3a1c20b3a9229eb6cb479b323cc91bb9 146 Gene3D G3DSA:3.30.160.170 37 132 4.7E-15 T 11-10-2018 IPR035924 FlaG-like superfamily Patl_3084 3a1c20b3a9229eb6cb479b323cc91bb9 146 Pfam PF03646 FlaG protein 40 144 3.4E-26 T 11-10-2018 IPR005186 FlaG protein Patl_0139 eefd7896963c245846c5d306bb2c653e 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 188 6.1E-13 T 11-10-2018 Patl_0139 eefd7896963c245846c5d306bb2c653e 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 72 187 1.8E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_0139 eefd7896963c245846c5d306bb2c653e 227 Gene3D G3DSA:3.40.50.1000 8 204 1.4E-21 T 11-10-2018 IPR023214 HAD superfamily Patl_0139 eefd7896963c245846c5d306bb2c653e 227 SUPERFAMILY SSF56784 5 216 1.73E-41 T 11-10-2018 IPR036412 HAD-like superfamily Patl_0139 eefd7896963c245846c5d306bb2c653e 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 1.9E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_0139 eefd7896963c245846c5d306bb2c653e 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 180 193 1.9E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_0139 eefd7896963c245846c5d306bb2c653e 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 1.9E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_0139 eefd7896963c245846c5d306bb2c653e 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 1.9E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_0139 eefd7896963c245846c5d306bb2c653e 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 1.9E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_3614 7a5884da06dc169fec2ab11c6593c80f 169 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 133 151 6.8E-38 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Patl_3614 7a5884da06dc169fec2ab11c6593c80f 169 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 23 40 6.8E-38 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Patl_3614 7a5884da06dc169fec2ab11c6593c80f 169 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 107 129 6.8E-38 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Patl_3614 7a5884da06dc169fec2ab11c6593c80f 169 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 83 103 6.8E-38 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Patl_3614 7a5884da06dc169fec2ab11c6593c80f 169 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 18 155 1.3E-58 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Patl_3614 7a5884da06dc169fec2ab11c6593c80f 169 Gene3D G3DSA:3.10.420.10 1 168 8.8E-58 T 11-10-2018 IPR035958 SecB-like superfamily Patl_3614 7a5884da06dc169fec2ab11c6593c80f 169 SUPERFAMILY SSF54611 11 152 4.8E-52 T 11-10-2018 IPR035958 SecB-like superfamily Patl_3614 7a5884da06dc169fec2ab11c6593c80f 169 Pfam PF02556 Preprotein translocase subunit SecB 15 153 1.0E-55 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Patl_3614 7a5884da06dc169fec2ab11c6593c80f 169 Hamap MF_00821 Protein-export protein SecB [secB]. 1 155 33.682 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 Patl_1240 80850ea4d9a0bddc271b85d1b780c111 107 Gene3D G3DSA:2.60.300.12 2 107 1.0E-36 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Patl_1240 80850ea4d9a0bddc271b85d1b780c111 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 3 103 2.6E-24 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Patl_1240 80850ea4d9a0bddc271b85d1b780c111 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 2.1E-54 T 11-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 Patl_1240 80850ea4d9a0bddc271b85d1b780c111 107 SUPERFAMILY SSF89360 3 96 5.36E-32 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Patl_1240 80850ea4d9a0bddc271b85d1b780c111 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Patl_1240 80850ea4d9a0bddc271b85d1b780c111 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 5.0E-36 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Patl_3745 68c1b34f8de86bb676097d885fffdace 75 Pfam PF01084 Ribosomal protein S18 19 68 1.0E-25 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3745 68c1b34f8de86bb676097d885fffdace 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3745 68c1b34f8de86bb676097d885fffdace 75 SUPERFAMILY SSF46911 3 74 2.09E-29 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3745 68c1b34f8de86bb676097d885fffdace 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 8.1E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3745 68c1b34f8de86bb676097d885fffdace 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 8.1E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3745 68c1b34f8de86bb676097d885fffdace 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 8.1E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3745 68c1b34f8de86bb676097d885fffdace 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 8.1E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3745 68c1b34f8de86bb676097d885fffdace 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 70 1.0E-22 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3745 68c1b34f8de86bb676097d885fffdace 75 Gene3D G3DSA:4.10.640.10 20 75 8.6E-29 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3745 68c1b34f8de86bb676097d885fffdace 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.537 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3745 68c1b34f8de86bb676097d885fffdace 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 4.8E-36 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1550 bd0222c1a8162683c2447bc2a1a72ac7 174 SUPERFAMILY SSF51182 4 169 1.96E-51 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_1550 bd0222c1a8162683c2447bc2a1a72ac7 174 Pfam PF06172 Cupin superfamily (DUF985) 13 146 5.9E-40 T 11-10-2018 IPR009327 Cupin domain of unknown function DUF985 Patl_1550 bd0222c1a8162683c2447bc2a1a72ac7 174 Gene3D G3DSA:2.60.120.10 8 170 1.6E-49 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 Pfam PF07724 AAA domain (Cdc48 subfamily) 598 761 4.8E-58 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 Gene3D G3DSA:3.40.50.300 158 347 3.1E-74 T 11-10-2018 Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 SMART SM01086 768 857 1.1E-35 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 Gene3D G3DSA:3.40.50.300 552 766 1.3E-90 T 11-10-2018 Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 316 4.3E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 SUPERFAMILY SSF81923 4 156 5.79E-39 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 SUPERFAMILY SSF52540 548 854 2.2E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 67 4.3E-12 T 11-10-2018 IPR004176 Clp, N-terminal Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 9.4E-10 T 11-10-2018 IPR004176 Clp, N-terminal Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 846 2.7E-25 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 SMART SM00382 599 738 7.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 SMART SM00382 198 343 1.3E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 Gene3D G3DSA:1.10.8.60 768 857 1.3E-26 T 11-10-2018 Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 Gene3D G3DSA:1.10.1780.10 1 148 8.8E-30 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 633 651 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 603 621 2.7E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 677 695 2.7E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 710 724 2.7E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 666 2.7E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 SUPERFAMILY SSF52540 159 547 5.07E-98 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 856 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 Patl_1337 79f5c1c0a4a12d30f011416b30afdb09 858 Gene3D G3DSA:3.40.50.300 348 546 1.1E-65 T 11-10-2018 Patl_1232 bbb393a197756a633fbc9acb9731f1cf 259 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Patl_1232 bbb393a197756a633fbc9acb9731f1cf 259 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.5E-26 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Patl_1232 bbb393a197756a633fbc9acb9731f1cf 259 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.5E-26 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Patl_1232 bbb393a197756a633fbc9acb9731f1cf 259 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.5E-26 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Patl_1232 bbb393a197756a633fbc9acb9731f1cf 259 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.5E-26 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 Patl_1232 bbb393a197756a633fbc9acb9731f1cf 259 Gene3D G3DSA:3.30.540.10 1 140 6.8E-51 T 11-10-2018 Patl_1232 bbb393a197756a633fbc9acb9731f1cf 259 SUPERFAMILY SSF56655 1 258 3.66E-86 T 11-10-2018 Patl_1232 bbb393a197756a633fbc9acb9731f1cf 259 Gene3D G3DSA:3.40.190.80 141 259 1.4E-39 T 11-10-2018 Patl_1232 bbb393a197756a633fbc9acb9731f1cf 259 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Patl_1232 bbb393a197756a633fbc9acb9731f1cf 259 Pfam PF00459 Inositol monophosphatase family 2 252 1.7E-71 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_1232 bbb393a197756a633fbc9acb9731f1cf 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 3.7E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_1232 bbb393a197756a633fbc9acb9731f1cf 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 3.7E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_1232 bbb393a197756a633fbc9acb9731f1cf 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 3.7E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_1232 bbb393a197756a633fbc9acb9731f1cf 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 3.7E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_1232 bbb393a197756a633fbc9acb9731f1cf 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 3.7E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_1232 bbb393a197756a633fbc9acb9731f1cf 259 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 3.7E-60 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_0408 5ec7dce96fc73d85dadffe126e6cb0df 289 Gene3D G3DSA:3.40.50.20 39 82 2.2E-12 T 11-10-2018 Patl_0408 5ec7dce96fc73d85dadffe126e6cb0df 289 Gene3D G3DSA:3.30.470.20 83 242 2.2E-12 T 11-10-2018 Patl_0408 5ec7dce96fc73d85dadffe126e6cb0df 289 SUPERFAMILY SSF56059 101 285 2.65E-19 T 11-10-2018 Patl_0408 5ec7dce96fc73d85dadffe126e6cb0df 289 Gene3D G3DSA:3.30.1490.20 108 175 2.2E-12 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Patl_3949 2513bece053ad39c61c347b0512aed33 308 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 163 296 1.2E-41 T 11-10-2018 IPR012660 Thioesterase, putative Patl_3949 2513bece053ad39c61c347b0512aed33 308 SUPERFAMILY SSF54637 153 296 3.17E-42 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_3949 2513bece053ad39c61c347b0512aed33 308 Gene3D G3DSA:3.40.630.30 2 145 1.1E-22 T 11-10-2018 Patl_3949 2513bece053ad39c61c347b0512aed33 308 Gene3D G3DSA:3.10.129.10 146 297 1.7E-46 T 11-10-2018 Patl_3949 2513bece053ad39c61c347b0512aed33 308 Pfam PF13673 Acetyltransferase (GNAT) domain 45 141 6.7E-11 T 11-10-2018 IPR000182 GNAT domain Patl_3949 2513bece053ad39c61c347b0512aed33 308 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 3.3E-53 T 11-10-2018 IPR012660 Thioesterase, putative Patl_3949 2513bece053ad39c61c347b0512aed33 308 SUPERFAMILY SSF55729 2 144 1.06E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_2693 33dcddd05717546bdc370f509d1fd556 228 SUPERFAMILY SSF48008 87 222 2.62E-14 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_2693 33dcddd05717546bdc370f509d1fd556 228 SMART SM00345 23 81 1.9E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2693 33dcddd05717546bdc370f509d1fd556 228 SMART SM00895 91 217 2.2E-7 T 11-10-2018 IPR011711 GntR, C-terminal Patl_2693 33dcddd05717546bdc370f509d1fd556 228 Gene3D G3DSA:1.10.10.10 18 80 2.1E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2693 33dcddd05717546bdc370f509d1fd556 228 Gene3D G3DSA:1.20.120.530 81 223 1.7E-15 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_2693 33dcddd05717546bdc370f509d1fd556 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 81 2.7E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2693 33dcddd05717546bdc370f509d1fd556 228 SUPERFAMILY SSF46785 22 85 3.7E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2693 33dcddd05717546bdc370f509d1fd556 228 Pfam PF07729 FCD domain 91 216 1.2E-14 T 11-10-2018 IPR011711 GntR, C-terminal Patl_3622 54b5cd438f36e83f32ecbdc00dd14a97 317 Gene3D G3DSA:3.20.20.70 2 317 4.7E-142 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_3622 54b5cd438f36e83f32ecbdc00dd14a97 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 311 2.8E-104 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Patl_3622 54b5cd438f36e83f32ecbdc00dd14a97 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Patl_3622 54b5cd438f36e83f32ecbdc00dd14a97 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Patl_3622 54b5cd438f36e83f32ecbdc00dd14a97 317 SUPERFAMILY SSF51569 1 316 1.36E-118 T 11-10-2018 Patl_3622 54b5cd438f36e83f32ecbdc00dd14a97 317 TIGRFAM TIGR00874 talAB: transaldolase 3 315 5.2E-155 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Patl_3622 54b5cd438f36e83f32ecbdc00dd14a97 317 Hamap MF_00492 Transaldolase [tal]. 2 317 51.663 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Patl_1606 270169ca802435b46a6c02523adffce8 426 SUPERFAMILY SSF53244 290 419 1.33E-29 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Patl_1606 270169ca802435b46a6c02523adffce8 426 TIGRFAM TIGR01499 folC: bifunctional protein FolC 36 419 6.7E-89 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Patl_1606 270169ca802435b46a6c02523adffce8 426 Pfam PF02875 Mur ligase family, glutamate ligase domain 291 340 4.7E-6 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Patl_1606 270169ca802435b46a6c02523adffce8 426 Gene3D G3DSA:3.90.190.20 292 425 5.8E-28 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Patl_1606 270169ca802435b46a6c02523adffce8 426 PIRSF PIRSF001563 10 426 5.8E-97 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Patl_1606 270169ca802435b46a6c02523adffce8 426 Pfam PF08245 Mur ligase middle domain 58 197 2.3E-11 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Patl_1606 270169ca802435b46a6c02523adffce8 426 SUPERFAMILY SSF53623 15 288 6.54E-78 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Patl_1606 270169ca802435b46a6c02523adffce8 426 Gene3D G3DSA:3.40.1190.10 4 291 4.1E-82 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Patl_3134 6af91167aefb128b3640efbe7c954a40 788 Gene3D G3DSA:1.20.58.1480 121 245 9.2E-44 T 11-10-2018 Patl_3134 6af91167aefb128b3640efbe7c954a40 788 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 2.3E-41 T 11-10-2018 IPR003111 Lon, substrate-binding domain Patl_3134 6af91167aefb128b3640efbe7c954a40 788 Gene3D G3DSA:2.30.130.40 1 116 6.9E-35 T 11-10-2018 Patl_3134 6af91167aefb128b3640efbe7c954a40 788 SUPERFAMILY SSF54211 595 771 1.06E-58 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_3134 6af91167aefb128b3640efbe7c954a40 788 Hamap MF_01973 Lon protease [lon]. 11 772 71.577 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Patl_3134 6af91167aefb128b3640efbe7c954a40 788 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 9.3E-99 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Patl_3134 6af91167aefb128b3640efbe7c954a40 788 Gene3D G3DSA:3.40.50.300 314 490 9.1E-62 T 11-10-2018 Patl_3134 6af91167aefb128b3640efbe7c954a40 788 PIRSF PIRSF001174 1 775 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Patl_3134 6af91167aefb128b3640efbe7c954a40 788 Gene3D G3DSA:1.10.8.60 491 584 5.1E-32 T 11-10-2018 Patl_3134 6af91167aefb128b3640efbe7c954a40 788 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Patl_3134 6af91167aefb128b3640efbe7c954a40 788 SMART SM00464 10 202 2.1E-78 T 11-10-2018 IPR003111 Lon, substrate-binding domain Patl_3134 6af91167aefb128b3640efbe7c954a40 788 SUPERFAMILY SSF52540 316 587 1.25E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3134 6af91167aefb128b3640efbe7c954a40 788 SMART SM00382 348 492 8.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3134 6af91167aefb128b3640efbe7c954a40 788 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 1.9E-55 T 11-10-2018 Patl_3134 6af91167aefb128b3640efbe7c954a40 788 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 1.9E-55 T 11-10-2018 Patl_3134 6af91167aefb128b3640efbe7c954a40 788 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 1.9E-55 T 11-10-2018 Patl_3134 6af91167aefb128b3640efbe7c954a40 788 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 1.9E-55 T 11-10-2018 Patl_3134 6af91167aefb128b3640efbe7c954a40 788 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 1.9E-55 T 11-10-2018 Patl_3134 6af91167aefb128b3640efbe7c954a40 788 Gene3D G3DSA:3.30.230.10 585 772 2.8E-84 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Patl_3134 6af91167aefb128b3640efbe7c954a40 788 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 488 8.7E-18 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Patl_3134 6af91167aefb128b3640efbe7c954a40 788 SUPERFAMILY SSF88697 10 201 3.73E-49 T 11-10-2018 IPR015947 PUA-like superfamily Patl_3964 e389888e61770044fd8db94464d14919 350 Gene3D G3DSA:3.75.10.10 1 332 5.3E-92 T 11-10-2018 Patl_3964 e389888e61770044fd8db94464d14919 350 SUPERFAMILY SSF55909 2 331 8.64E-91 T 11-10-2018 Patl_3964 e389888e61770044fd8db94464d14919 350 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 3 331 2.6E-91 T 11-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 Patl_2043 ebde232d23d04f1be4a316e9c5af14ce 375 PIRSF PIRSF000524 7 375 2.0E-112 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Patl_2043 ebde232d23d04f1be4a316e9c5af14ce 375 Gene3D G3DSA:3.40.640.10 24 272 2.2E-143 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_2043 ebde232d23d04f1be4a316e9c5af14ce 375 Gene3D G3DSA:3.90.1150.10 11 369 2.2E-143 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_2043 ebde232d23d04f1be4a316e9c5af14ce 375 SUPERFAMILY SSF53383 11 374 2.31E-104 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_2043 ebde232d23d04f1be4a316e9c5af14ce 375 Pfam PF00266 Aminotransferase class-V 19 351 9.7E-38 T 11-10-2018 IPR000192 Aminotransferase class V domain Patl_0489 e8df07db150050fc0bb554a8e7d92e23 781 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 34 751 8.6E-272 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_0489 e8df07db150050fc0bb554a8e7d92e23 781 PIRSF PIRSF002799 1 781 0.0 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_0489 e8df07db150050fc0bb554a8e7d92e23 781 Gene3D G3DSA:3.40.710.10 67 722 1.1E-248 T 11-10-2018 Patl_0489 e8df07db150050fc0bb554a8e7d92e23 781 Pfam PF14814 Bifunctional transglycosylase second domain 81 158 2.9E-20 T 11-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_0489 e8df07db150050fc0bb554a8e7d92e23 781 Gene3D G3DSA:3.30.2060.10 75 164 1.1E-248 T 11-10-2018 Patl_0489 e8df07db150050fc0bb554a8e7d92e23 781 SUPERFAMILY SSF53955 168 366 9.28E-67 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Patl_0489 e8df07db150050fc0bb554a8e7d92e23 781 Pfam PF00905 Penicillin binding protein transpeptidase domain 438 676 4.1E-23 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Patl_0489 e8df07db150050fc0bb554a8e7d92e23 781 SUPERFAMILY SSF56601 326 765 6.57E-109 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Patl_0489 e8df07db150050fc0bb554a8e7d92e23 781 Pfam PF00912 Transglycosylase 173 342 1.1E-56 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_0489 e8df07db150050fc0bb554a8e7d92e23 781 Gene3D G3DSA:1.10.3810.10 165 367 1.1E-248 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_1675 3be16167d5fffd3cb5c7a66e59fa1f8d 300 Gene3D G3DSA:3.40.190.10 169 269 4.8E-12 T 11-10-2018 Patl_1675 3be16167d5fffd3cb5c7a66e59fa1f8d 300 Pfam PF03466 LysR substrate binding domain 94 291 4.4E-22 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_1675 3be16167d5fffd3cb5c7a66e59fa1f8d 300 SUPERFAMILY SSF46785 6 91 3.68E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1675 3be16167d5fffd3cb5c7a66e59fa1f8d 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 5.2E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1675 3be16167d5fffd3cb5c7a66e59fa1f8d 300 Gene3D G3DSA:1.10.10.10 4 96 4.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1675 3be16167d5fffd3cb5c7a66e59fa1f8d 300 SUPERFAMILY SSF53850 92 293 2.02E-25 T 11-10-2018 Patl_1675 3be16167d5fffd3cb5c7a66e59fa1f8d 300 Gene3D G3DSA:3.40.190.10 108 278 4.8E-12 T 11-10-2018 Patl_3709 4c58092f427cbd26c528276a25891c56 245 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 129.31 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Patl_3709 4c58092f427cbd26c528276a25891c56 245 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 7.5E-103 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Patl_3709 4c58092f427cbd26c528276a25891c56 245 Gene3D G3DSA:3.20.20.70 1 245 4.4E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_3709 4c58092f427cbd26c528276a25891c56 245 SUPERFAMILY SSF63892 4 241 6.67E-100 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Patl_3709 4c58092f427cbd26c528276a25891c56 245 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 1.4E-96 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 Patl_2079 f89ba9f3042ac73061e99ff8722c7c41 176 Pfam PF04542 Sigma-70 region 2 27 95 4.6E-12 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Patl_2079 f89ba9f3042ac73061e99ff8722c7c41 176 Gene3D G3DSA:1.10.10.10 120 176 3.5E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2079 f89ba9f3042ac73061e99ff8722c7c41 176 Gene3D G3DSA:1.10.1740.10 1 119 2.4E-23 T 11-10-2018 Patl_2079 f89ba9f3042ac73061e99ff8722c7c41 176 SUPERFAMILY SSF88659 109 173 1.51E-7 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_2079 f89ba9f3042ac73061e99ff8722c7c41 176 SUPERFAMILY SSF88946 2 110 5.89E-20 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Patl_2079 f89ba9f3042ac73061e99ff8722c7c41 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 171 2.2E-19 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Patl_2079 f89ba9f3042ac73061e99ff8722c7c41 176 Pfam PF08281 Sigma-70, region 4 118 168 1.3E-11 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_3149 a7472b83f592dbd965fb7c6d4ca1ab7c 227 SUPERFAMILY SSF69065 8 148 1.62E-45 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Patl_3149 a7472b83f592dbd965fb7c6d4ca1ab7c 227 SMART SM00358 157 225 5.3E-18 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain Patl_3149 a7472b83f592dbd965fb7c6d4ca1ab7c 227 Gene3D G3DSA:3.30.160.20 155 226 1.2E-18 T 11-10-2018 Patl_3149 a7472b83f592dbd965fb7c6d4ca1ab7c 227 Pfam PF00035 Double-stranded RNA binding motif 158 224 1.1E-13 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain Patl_3149 a7472b83f592dbd965fb7c6d4ca1ab7c 227 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 12 224 4.7E-73 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Patl_3149 a7472b83f592dbd965fb7c6d4ca1ab7c 227 SUPERFAMILY SSF54768 110 224 5.81E-26 T 11-10-2018 Patl_3149 a7472b83f592dbd965fb7c6d4ca1ab7c 227 SMART SM00535 22 150 8.3E-51 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Patl_3149 a7472b83f592dbd965fb7c6d4ca1ab7c 227 Pfam PF14622 Ribonuclease-III-like 23 143 2.0E-32 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Patl_3149 a7472b83f592dbd965fb7c6d4ca1ab7c 227 ProSitePatterns PS00517 Ribonuclease III family signature. 39 47 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Patl_3149 a7472b83f592dbd965fb7c6d4ca1ab7c 227 Gene3D G3DSA:1.10.1520.10 8 148 1.1E-40 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Patl_3149 a7472b83f592dbd965fb7c6d4ca1ab7c 227 Hamap MF_00104 Ribonuclease 3 [rnc]. 10 221 29.213 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Patl_1452 dcbff170e2ea70a614efa70b634f6214 528 PIRSF PIRSF006446 2 526 1.1E-139 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Patl_1452 dcbff170e2ea70a614efa70b634f6214 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 1.5E-172 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Patl_1073 8112647b2a1f6fbd4fb92de8d17c5bd6 755 Pfam PF02706 Chain length determinant protein 17 109 1.8E-13 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Patl_1073 8112647b2a1f6fbd4fb92de8d17c5bd6 755 Pfam PF13614 AAA domain 559 698 4.8E-8 T 11-10-2018 IPR025669 AAA domain Patl_1073 8112647b2a1f6fbd4fb92de8d17c5bd6 755 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 528 730 2.6E-48 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 Patl_1073 8112647b2a1f6fbd4fb92de8d17c5bd6 755 Pfam PF13807 G-rich domain on putative tyrosine kinase 405 476 2.7E-11 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain Patl_1073 8112647b2a1f6fbd4fb92de8d17c5bd6 755 Gene3D G3DSA:3.40.50.300 471 748 2.1E-69 T 11-10-2018 Patl_1073 8112647b2a1f6fbd4fb92de8d17c5bd6 755 SUPERFAMILY SSF52540 547 723 5.91E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 PRINTS PR00702 Acriflavin resistance protein family signature 65 83 9.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 PRINTS PR00702 Acriflavin resistance protein family signature 459 482 9.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 PRINTS PR00702 Acriflavin resistance protein family signature 352 375 9.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 PRINTS PR00702 Acriflavin resistance protein family signature 37 61 9.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 PRINTS PR00702 Acriflavin resistance protein family signature 484 507 9.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 PRINTS PR00702 Acriflavin resistance protein family signature 406 430 9.3E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 Pfam PF00873 AcrB/AcrD/AcrF family 31 1038 2.0E-157 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 Gene3D G3DSA:3.30.70.1440 681 878 9.5E-257 T 11-10-2018 Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 Gene3D G3DSA:3.30.70.1430 67 825 9.5E-257 T 11-10-2018 Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 SUPERFAMILY SSF82714 741 814 1.57E-8 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 Gene3D G3DSA:3.30.70.1320 160 348 9.5E-257 T 11-10-2018 Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 SUPERFAMILY SSF82866 320 510 2.22E-37 T 11-10-2018 Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 Gene3D G3DSA:3.30.70.1430 580 680 9.5E-257 T 11-10-2018 Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 Gene3D G3DSA:3.30.2090.10 201 291 9.5E-257 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 SUPERFAMILY SSF82693 67 158 1.1E-16 T 11-10-2018 Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 SUPERFAMILY SSF82714 206 289 1.31E-13 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 SUPERFAMILY SSF82866 815 1041 7.32E-46 T 11-10-2018 Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 Gene3D G3DSA:1.20.1640.10 37 523 9.5E-257 T 11-10-2018 Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 Gene3D G3DSA:1.20.1640.10 524 1035 9.5E-257 T 11-10-2018 Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 Gene3D G3DSA:3.30.2090.10 730 817 9.5E-257 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_0403 94384d9e408dbee5a88b27885b2ea6aa 1069 SUPERFAMILY SSF82693 169 346 9.16E-8 T 11-10-2018 Patl_1972 01a3426fb450e7bea04efec51829ac1c 177 SUPERFAMILY SSF54523 15 91 1.18E-11 T 11-10-2018 Patl_1972 01a3426fb450e7bea04efec51829ac1c 177 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 34 7.1E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_1972 01a3426fb450e7bea04efec51829ac1c 177 Gene3D G3DSA:3.30.700.10 15 176 9.4E-11 T 11-10-2018 Patl_1972 01a3426fb450e7bea04efec51829ac1c 177 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_1972 01a3426fb450e7bea04efec51829ac1c 177 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 34 1.2E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0017 91e71d65f34e986a4b7d25ee33cc3d43 248 PIRSF PIRSF002859 1 248 6.1E-39 T 11-10-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 Patl_0017 91e71d65f34e986a4b7d25ee33cc3d43 248 Pfam PF05818 Enterobacterial TraT complement resistance protein 34 248 4.1E-64 T 11-10-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 Patl_2287 5321f7dd747d679c50a36c2189876e2d 269 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 9.4E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Patl_2287 5321f7dd747d679c50a36c2189876e2d 269 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 9.4E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Patl_2287 5321f7dd747d679c50a36c2189876e2d 269 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 9.4E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Patl_2287 5321f7dd747d679c50a36c2189876e2d 269 SUPERFAMILY SSF52343 105 266 1.83E-35 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_2287 5321f7dd747d679c50a36c2189876e2d 269 Pfam PF00970 Oxidoreductase FAD-binding domain 16 91 1.7E-8 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Patl_2287 5321f7dd747d679c50a36c2189876e2d 269 Gene3D G3DSA:2.40.30.10 1 97 2.9E-28 T 11-10-2018 Patl_2287 5321f7dd747d679c50a36c2189876e2d 269 SUPERFAMILY SSF63380 4 99 2.87E-22 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Patl_2287 5321f7dd747d679c50a36c2189876e2d 269 Pfam PF00175 Oxidoreductase NAD-binding domain 112 240 6.7E-8 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Patl_2287 5321f7dd747d679c50a36c2189876e2d 269 Gene3D G3DSA:3.40.50.80 102 265 1.1E-42 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_4062 4e6f0f85fb1c23b52aa4cfe18487cf81 141 Pfam PF04134 Protein of unknown function, DUF393 5 112 4.3E-26 T 11-10-2018 IPR007263 Protein of unknown function DUF393 Patl_1144 56a9f18ce9becfa80b148f5e1aca402f 157 SMART SM00886 57 155 1.0E-23 T 11-10-2018 IPR013097 Stress responsive alpha-beta barrel Patl_1144 56a9f18ce9becfa80b148f5e1aca402f 157 Pfam PF07876 Stress responsive A/B Barrel Domain 59 153 3.6E-17 T 11-10-2018 IPR013097 Stress responsive alpha-beta barrel Patl_1144 56a9f18ce9becfa80b148f5e1aca402f 157 Gene3D G3DSA:3.30.70.100 48 155 1.2E-25 T 11-10-2018 Patl_1144 56a9f18ce9becfa80b148f5e1aca402f 157 SUPERFAMILY SSF54909 55 153 8.31E-24 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_1696 f1863b8c90f6a8d93e0ac4fafad9795b 138 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 Patl_1696 f1863b8c90f6a8d93e0ac4fafad9795b 138 SUPERFAMILY SSF89919 3 115 1.96E-29 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Patl_1696 f1863b8c90f6a8d93e0ac4fafad9795b 138 Pfam PF02033 Ribosome-binding factor A 7 112 9.7E-29 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Patl_1696 f1863b8c90f6a8d93e0ac4fafad9795b 138 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 1.0E-48 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Patl_1696 f1863b8c90f6a8d93e0ac4fafad9795b 138 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 115 1.0E-33 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Patl_1696 f1863b8c90f6a8d93e0ac4fafad9795b 138 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 113 23.959 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Patl_1696 f1863b8c90f6a8d93e0ac4fafad9795b 138 Gene3D G3DSA:3.30.300.20 1 108 5.6E-33 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Patl_1398 61f48f6059478574437816ad694b59bf 201 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 161 195 1.2E-9 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_1398 61f48f6059478574437816ad694b59bf 201 PIRSF PIRSF000239 1 200 4.7E-57 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_1398 61f48f6059478574437816ad694b59bf 201 Pfam PF00578 AhpC/TSA family 6 140 5.4E-34 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_1398 61f48f6059478574437816ad694b59bf 201 Gene3D G3DSA:3.40.30.10 1 198 5.5E-73 T 11-10-2018 Patl_1398 61f48f6059478574437816ad694b59bf 201 SUPERFAMILY SSF52833 4 195 3.19E-66 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_3830 983cd76394b10ceb048578684019d4aa 943 SMART SM00487 153 349 2.0E-17 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_3830 983cd76394b10ceb048578684019d4aa 943 SUPERFAMILY SSF52540 276 627 4.52E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3830 983cd76394b10ceb048578684019d4aa 943 SMART SM00490 500 584 7.6E-12 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_3830 983cd76394b10ceb048578684019d4aa 943 Pfam PF00271 Helicase conserved C-terminal domain 478 584 8.6E-13 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_3830 983cd76394b10ceb048578684019d4aa 943 SUPERFAMILY SSF52540 124 357 1.14E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3830 983cd76394b10ceb048578684019d4aa 943 Gene3D G3DSA:2.30.30.930 59 117 6.1E-21 T 11-10-2018 Patl_3830 983cd76394b10ceb048578684019d4aa 943 Pfam PF00176 SNF2 family N-terminal domain 177 348 6.7E-19 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Patl_3830 983cd76394b10ceb048578684019d4aa 943 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 5 942 26.92 T 11-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 Patl_3830 983cd76394b10ceb048578684019d4aa 943 Gene3D G3DSA:3.30.360.80 697 768 6.0E-23 T 11-10-2018 Patl_3830 983cd76394b10ceb048578684019d4aa 943 Pfam PF12137 RNA polymerase recycling family C-terminal 588 941 6.3E-127 T 11-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 Patl_3830 983cd76394b10ceb048578684019d4aa 943 Gene3D G3DSA:3.40.50.10810 153 434 9.3E-93 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Patl_3830 983cd76394b10ceb048578684019d4aa 943 Gene3D G3DSA:3.40.50.300 461 617 5.5E-21 T 11-10-2018 Patl_3830 983cd76394b10ceb048578684019d4aa 943 Gene3D G3DSA:2.30.30.140 5 57 5.2E-23 T 11-10-2018 Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 Gene3D G3DSA:3.20.20.450 1272 1519 1.6E-82 T 11-10-2018 IPR035919 EAL domain superfamily Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 Gene3D G3DSA:2.130.10.10 36 352 7.1E-45 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 SUPERFAMILY SSF141868 1274 1519 3.79E-79 T 11-10-2018 IPR035919 EAL domain superfamily Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 Gene3D G3DSA:3.30.450.20 963 1091 1.5E-7 T 11-10-2018 Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 SUPERFAMILY SSF55785 853 961 1.1E-7 T 11-10-2018 IPR035965 PAS domain superfamily Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 Pfam PF07494 Two component regulator propeller 89 109 0.0026 T 11-10-2018 IPR011110 Two component regulator propeller Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 SUPERFAMILY SSF63829 280 483 2.75E-11 T 11-10-2018 Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 Gene3D G3DSA:3.30.70.270 1093 1271 1.0E-61 T 11-10-2018 Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 Pfam PF08447 PAS fold 872 955 1.1E-7 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 SUPERFAMILY SSF55073 1103 1260 6.75E-51 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 Gene3D G3DSA:2.130.10.10 353 518 2.5E-18 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 Gene3D G3DSA:3.30.450.20 841 958 1.8E-12 T 11-10-2018 Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 SMART SM00052 1269 1513 1.8E-92 T 11-10-2018 IPR001633 EAL domain Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1096 1257 1.1E-42 T 11-10-2018 IPR000160 GGDEF domain Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 Gene3D G3DSA:2.60.40.10 685 804 9.0E-14 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 SUPERFAMILY SSF55785 981 1094 2.09E-7 T 11-10-2018 IPR035965 PAS domain superfamily Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 SUPERFAMILY SSF50952 86 362 5.23E-11 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 Gene3D G3DSA:2.130.10.10 527 683 8.8E-25 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 SMART SM00267 1087 1259 2.9E-62 T 11-10-2018 IPR000160 GGDEF domain Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 Pfam PF00563 EAL domain 1276 1508 1.4E-65 T 11-10-2018 IPR001633 EAL domain Patl_1680 4ab1260d9e2d1c2c87e163f4e9d1475d 1524 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1098 1254 1.2E-48 T 11-10-2018 IPR000160 GGDEF domain Patl_3769 413868c1d8f02f5a86b6a07e97c0249e 756 Gene3D G3DSA:2.120.10.30 170 440 1.6E-10 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Patl_3769 413868c1d8f02f5a86b6a07e97c0249e 756 SUPERFAMILY SSF82171 191 522 4.12E-17 T 11-10-2018 Patl_3769 413868c1d8f02f5a86b6a07e97c0249e 756 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 98 4.7E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_3769 413868c1d8f02f5a86b6a07e97c0249e 756 Pfam PF07676 WD40-like Beta Propeller Repeat 185 211 0.0036 T 11-10-2018 IPR011659 WD40-like Beta Propeller Patl_3769 413868c1d8f02f5a86b6a07e97c0249e 756 SMART SM00862 23 98 8.0E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_3769 413868c1d8f02f5a86b6a07e97c0249e 756 SUPERFAMILY SSF46894 4 99 6.52E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_3769 413868c1d8f02f5a86b6a07e97c0249e 756 Gene3D G3DSA:1.10.10.10 1 109 1.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0359 496d8842811da8d82e95aae24593cdd1 248 SMART SM00421 181 238 8.4E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0359 496d8842811da8d82e95aae24593cdd1 248 Pfam PF03472 Autoinducer binding domain 20 167 3.2E-31 T 11-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain Patl_0359 496d8842811da8d82e95aae24593cdd1 248 Gene3D G3DSA:3.30.450.80 3 183 7.8E-30 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily Patl_0359 496d8842811da8d82e95aae24593cdd1 248 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 198 9.0E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0359 496d8842811da8d82e95aae24593cdd1 248 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 214 226 9.0E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0359 496d8842811da8d82e95aae24593cdd1 248 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 198 214 9.0E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0359 496d8842811da8d82e95aae24593cdd1 248 Pfam PF00196 Bacterial regulatory proteins, luxR family 184 238 2.4E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0359 496d8842811da8d82e95aae24593cdd1 248 Gene3D G3DSA:1.10.10.10 184 244 3.4E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0359 496d8842811da8d82e95aae24593cdd1 248 ProSitePatterns PS00622 LuxR-type HTH domain signature. 198 225 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0359 496d8842811da8d82e95aae24593cdd1 248 SUPERFAMILY SSF46894 176 245 6.12E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_0359 496d8842811da8d82e95aae24593cdd1 248 SUPERFAMILY SSF75516 6 169 1.83E-33 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily Patl_2977 4d03cb502c64d7889eb100ee9bcb4b71 316 Gene3D G3DSA:3.40.50.720 9 314 3.6E-66 T 11-10-2018 Patl_2977 4d03cb502c64d7889eb100ee9bcb4b71 316 SUPERFAMILY SSF51735 19 263 4.53E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2977 4d03cb502c64d7889eb100ee9bcb4b71 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 1.0E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2977 4d03cb502c64d7889eb100ee9bcb4b71 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 24 41 1.0E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2977 4d03cb502c64d7889eb100ee9bcb4b71 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 101 112 1.0E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2977 4d03cb502c64d7889eb100ee9bcb4b71 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 226 1.0E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2977 4d03cb502c64d7889eb100ee9bcb4b71 316 Pfam PF00106 short chain dehydrogenase 23 166 4.8E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0192 66dea3b7abab60b0dc352e179738f0c6 175 Gene3D G3DSA:1.10.60.30 28 104 2.5E-21 T 11-10-2018 Patl_0192 66dea3b7abab60b0dc352e179738f0c6 175 Pfam PF04751 Protein of unknown function (DUF615) 19 170 5.5E-53 T 11-10-2018 IPR006839 Ribosome-associated, YjgA Patl_0192 66dea3b7abab60b0dc352e179738f0c6 175 SUPERFAMILY SSF158710 28 172 1.96E-47 T 11-10-2018 IPR023153 PSPTO4464-like domain superfamily Patl_0192 66dea3b7abab60b0dc352e179738f0c6 175 Gene3D G3DSA:1.10.60.30 105 174 4.0E-26 T 11-10-2018 Patl_0192 66dea3b7abab60b0dc352e179738f0c6 175 PIRSF PIRSF016183 1 175 6.8E-60 T 11-10-2018 IPR006839 Ribosome-associated, YjgA Patl_1456 180d02ef9fb602fb6f3c0131253b2695 624 Gene3D G3DSA:1.20.1560.10 4 319 1.7E-29 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Patl_1456 180d02ef9fb602fb6f3c0131253b2695 624 SMART SM00382 405 600 5.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1456 180d02ef9fb602fb6f3c0131253b2695 624 Pfam PF00005 ABC transporter 396 553 1.1E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1456 180d02ef9fb602fb6f3c0131253b2695 624 SUPERFAMILY SSF90123 6 318 4.97E-38 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Patl_1456 180d02ef9fb602fb6f3c0131253b2695 624 Pfam PF00664 ABC transporter transmembrane region 24 286 1.8E-10 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Patl_1456 180d02ef9fb602fb6f3c0131253b2695 624 SUPERFAMILY SSF52540 366 622 1.84E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1456 180d02ef9fb602fb6f3c0131253b2695 624 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 584 5.0E-109 T 11-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 Patl_1456 180d02ef9fb602fb6f3c0131253b2695 624 ProSitePatterns PS00211 ABC transporters family signature. 526 540 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_1456 180d02ef9fb602fb6f3c0131253b2695 624 Gene3D G3DSA:3.40.50.300 354 624 3.4E-68 T 11-10-2018 Patl_3340 4c565c36b7d7696ff22dce6d59a761d3 277 SUPERFAMILY SSF160950 29 277 2.22E-83 T 11-10-2018 IPR036268 ZapD domain superfamily Patl_3340 4c565c36b7d7696ff22dce6d59a761d3 277 Hamap MF_01092 Cell division protein ZapD [zapD]. 30 277 30.929 T 11-10-2018 IPR009777 Cell division protein ZapD Patl_3340 4c565c36b7d7696ff22dce6d59a761d3 277 Gene3D G3DSA:2.60.440.10 32 277 4.1E-85 T 11-10-2018 IPR027462 Z ring-associated protein D, C-terminal Patl_3340 4c565c36b7d7696ff22dce6d59a761d3 277 Pfam PF07072 Cell division protein 45 252 1.1E-73 T 11-10-2018 IPR009777 Cell division protein ZapD Patl_3340 4c565c36b7d7696ff22dce6d59a761d3 277 Gene3D G3DSA:1.10.3900.10 39 205 4.1E-85 T 11-10-2018 Patl_3476 0beee97d764865207ceef53b2cb99dca 321 SMART SM00849 89 294 4.4E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_3476 0beee97d764865207ceef53b2cb99dca 321 SUPERFAMILY SSF56281 34 317 2.1E-53 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_3476 0beee97d764865207ceef53b2cb99dca 321 Pfam PF00753 Metallo-beta-lactamase superfamily 87 294 3.7E-19 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_3476 0beee97d764865207ceef53b2cb99dca 321 Gene3D G3DSA:3.60.15.10 30 320 1.1E-107 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_1470 4d68b8c06723322a1588f9c54c6d0bb5 68 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 61 8.9E-25 T 11-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system Patl_1670 329bda173e161bf8e05cf6b8e538a7a3 458 Gene3D G3DSA:1.20.120.140 4 305 2.6E-123 T 11-10-2018 Patl_1670 329bda173e161bf8e05cf6b8e538a7a3 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.083 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Patl_1670 329bda173e161bf8e05cf6b8e538a7a3 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.7E-177 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Patl_1670 329bda173e161bf8e05cf6b8e538a7a3 458 Gene3D G3DSA:1.10.260.30 328 450 6.9E-44 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Patl_1670 329bda173e161bf8e05cf6b8e538a7a3 458 Gene3D G3DSA:3.40.50.300 90 285 2.6E-123 T 11-10-2018 Patl_1670 329bda173e161bf8e05cf6b8e538a7a3 458 SMART SM00962 100 296 2.5E-118 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Patl_1670 329bda173e161bf8e05cf6b8e538a7a3 458 SUPERFAMILY SSF52540 42 353 9.03E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1670 329bda173e161bf8e05cf6b8e538a7a3 458 SUPERFAMILY SSF47446 329 431 2.62E-37 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Patl_1670 329bda173e161bf8e05cf6b8e538a7a3 458 SMART SM00963 1 86 7.6E-36 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Patl_1670 329bda173e161bf8e05cf6b8e538a7a3 458 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Patl_1670 329bda173e161bf8e05cf6b8e538a7a3 458 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.8E-75 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Patl_1670 329bda173e161bf8e05cf6b8e538a7a3 458 Pfam PF02978 Signal peptide binding domain 329 427 7.8E-34 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Patl_1670 329bda173e161bf8e05cf6b8e538a7a3 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 4.6E-21 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Patl_1670 329bda173e161bf8e05cf6b8e538a7a3 458 SMART SM00382 99 247 1.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_4147 46677b2f01a8d0fd5cd1b8c9f1a50faf 497 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 3 489 2.7E-195 T 11-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 Patl_4147 46677b2f01a8d0fd5cd1b8c9f1a50faf 497 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 31 429 7.4E-83 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_4147 46677b2f01a8d0fd5cd1b8c9f1a50faf 497 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 153 178 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site Patl_4147 46677b2f01a8d0fd5cd1b8c9f1a50faf 497 Gene3D G3DSA:1.20.1730.10 19 496 5.9E-80 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Patl_4147 46677b2f01a8d0fd5cd1b8c9f1a50faf 497 Pfam PF00474 Sodium:solute symporter family 31 429 1.3E-86 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_0256 dfe69ed4ba0a27de3c795eff93fa145e 778 Gene3D G3DSA:3.20.20.450 515 766 5.9E-86 T 11-10-2018 IPR035919 EAL domain superfamily Patl_0256 dfe69ed4ba0a27de3c795eff93fa145e 778 SMART SM00304 294 347 2.3E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_0256 dfe69ed4ba0a27de3c795eff93fa145e 778 Pfam PF00990 Diguanylate cyclase, GGDEF domain 353 494 7.5E-17 T 11-10-2018 IPR000160 GGDEF domain Patl_0256 dfe69ed4ba0a27de3c795eff93fa145e 778 Pfam PF14827 Double sensory domain of two-component sensor kinase 38 217 3.3E-7 T 11-10-2018 IPR029150 Double Cache domain 3 Patl_0256 dfe69ed4ba0a27de3c795eff93fa145e 778 Pfam PF00672 HAMP domain 294 344 9.1E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_0256 dfe69ed4ba0a27de3c795eff93fa145e 778 Gene3D G3DSA:1.20.1480.50 260 349 1.2E-12 T 11-10-2018 Patl_0256 dfe69ed4ba0a27de3c795eff93fa145e 778 SUPERFAMILY SSF158472 294 344 1.24E-7 T 11-10-2018 Patl_0256 dfe69ed4ba0a27de3c795eff93fa145e 778 SUPERFAMILY SSF55073 358 495 1.26E-18 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_0256 dfe69ed4ba0a27de3c795eff93fa145e 778 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 351 496 4.6E-13 T 11-10-2018 IPR000160 GGDEF domain Patl_0256 dfe69ed4ba0a27de3c795eff93fa145e 778 Pfam PF00563 EAL domain 519 754 8.3E-68 T 11-10-2018 IPR001633 EAL domain Patl_0256 dfe69ed4ba0a27de3c795eff93fa145e 778 SUPERFAMILY SSF141868 527 771 2.09E-77 T 11-10-2018 IPR035919 EAL domain superfamily Patl_0256 dfe69ed4ba0a27de3c795eff93fa145e 778 Gene3D G3DSA:3.30.70.270 350 514 3.6E-22 T 11-10-2018 Patl_0256 dfe69ed4ba0a27de3c795eff93fa145e 778 SMART SM00052 512 759 1.3E-94 T 11-10-2018 IPR001633 EAL domain Patl_0256 dfe69ed4ba0a27de3c795eff93fa145e 778 SMART SM00267 342 501 2.1E-8 T 11-10-2018 IPR000160 GGDEF domain Patl_2485 3a7f7755f38d8298b2a954cf8fe91b70 198 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Patl_2485 3a7f7755f38d8298b2a954cf8fe91b70 198 Pfam PF03358 NADPH-dependent FMN reductase 12 140 2.2E-9 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Patl_2485 3a7f7755f38d8298b2a954cf8fe91b70 198 Gene3D G3DSA:3.40.50.360 1 197 3.2E-63 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_2485 3a7f7755f38d8298b2a954cf8fe91b70 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 5 195 1.7E-45 T 11-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 Patl_2485 3a7f7755f38d8298b2a954cf8fe91b70 198 SUPERFAMILY SSF52218 3 195 4.32E-61 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_0054 d230003ac00544017bfe5b1bf1412194 467 Pfam PF14052 Capsule assembly protein Wzi 126 419 3.6E-30 T 11-10-2018 IPR026950 Capsule assembly protein Wzi Patl_0054 d230003ac00544017bfe5b1bf1412194 467 Gene3D G3DSA:2.40.160.130 49 440 1.3E-34 T 11-10-2018 IPR038636 Capsule assembly protein Wzi superfamily Patl_3317 18f0546af0d570026dba314f2904580d 464 Pfam PF12501 Phosphate ATP-binding cassette transporter 8 182 2.7E-27 T 11-10-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 Patl_3317 18f0546af0d570026dba314f2904580d 464 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 251 458 6.5E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Patl_3317 18f0546af0d570026dba314f2904580d 464 Gene3D G3DSA:1.10.3720.10 231 462 1.8E-34 T 11-10-2018 IPR035906 MetI-like superfamily Patl_3317 18f0546af0d570026dba314f2904580d 464 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 166 459 7.8E-90 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Patl_3317 18f0546af0d570026dba314f2904580d 464 SUPERFAMILY SSF161098 231 451 9.16E-33 T 11-10-2018 IPR035906 MetI-like superfamily Patl_1565 42dbdcbe4acdf3114d2c96ab96bcdec6 173 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 2 163 21.069 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 Patl_1565 42dbdcbe4acdf3114d2c96ab96bcdec6 173 Pfam PF04390 Lipopolysaccharide-assembly 40 158 1.4E-12 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 Patl_1565 42dbdcbe4acdf3114d2c96ab96bcdec6 173 Gene3D G3DSA:3.30.160.150 14 166 1.9E-46 T 11-10-2018 Patl_2832 d10d094726ddf057d5d43d44f6a4d810 468 Gene3D G3DSA:3.20.20.70 8 258 2.1E-169 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2832 d10d094726ddf057d5d43d44f6a4d810 468 SUPERFAMILY SSF51366 1 256 5.18E-83 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Patl_2832 d10d094726ddf057d5d43d44f6a4d810 468 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 257 34.088 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Patl_2832 d10d094726ddf057d5d43d44f6a4d810 468 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 261 463 1.6E-47 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Patl_2832 d10d094726ddf057d5d43d44f6a4d810 468 Gene3D G3DSA:3.20.20.70 259 462 2.1E-169 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2832 d10d094726ddf057d5d43d44f6a4d810 468 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 260 468 31.588 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Patl_2832 d10d094726ddf057d5d43d44f6a4d810 468 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 255 4.6E-89 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Patl_2832 d10d094726ddf057d5d43d44f6a4d810 468 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 Patl_2832 d10d094726ddf057d5d43d44f6a4d810 468 SUPERFAMILY SSF51366 259 466 1.37E-53 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Patl_1976 90f148059004c9e8998caede598ee2b8 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1976 90f148059004c9e8998caede598ee2b8 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1976 90f148059004c9e8998caede598ee2b8 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1976 90f148059004c9e8998caede598ee2b8 261 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 10 260 1.8E-103 T 11-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 Patl_1976 90f148059004c9e8998caede598ee2b8 261 SUPERFAMILY SSF51735 8 260 1.02E-70 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1976 90f148059004c9e8998caede598ee2b8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 3.2E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1976 90f148059004c9e8998caede598ee2b8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.2E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1976 90f148059004c9e8998caede598ee2b8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.2E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1976 90f148059004c9e8998caede598ee2b8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.2E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1976 90f148059004c9e8998caede598ee2b8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.2E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1976 90f148059004c9e8998caede598ee2b8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.2E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1976 90f148059004c9e8998caede598ee2b8 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_1976 90f148059004c9e8998caede598ee2b8 261 Gene3D G3DSA:3.40.50.720 1 261 2.1E-72 T 11-10-2018 Patl_1976 90f148059004c9e8998caede598ee2b8 261 Pfam PF00106 short chain dehydrogenase 11 198 1.5E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2715 65fae9f33573604f7696892ae9c2d187 391 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Patl_2715 65fae9f33573604f7696892ae9c2d187 391 SUPERFAMILY SSF56645 7 248 1.02E-68 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_2715 65fae9f33573604f7696892ae9c2d187 391 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 237 385 1.0E-45 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_2715 65fae9f33573604f7696892ae9c2d187 391 Gene3D G3DSA:1.20.140.10 243 390 1.5E-49 T 11-10-2018 Patl_2715 65fae9f33573604f7696892ae9c2d187 391 PIRSF PIRSF016578 3 110 0.0025 T 11-10-2018 Patl_2715 65fae9f33573604f7696892ae9c2d187 391 PIRSF PIRSF016578 218 390 3.6E-10 T 11-10-2018 Patl_2715 65fae9f33573604f7696892ae9c2d187 391 Gene3D G3DSA:2.40.110.10 121 242 2.0E-37 T 11-10-2018 Patl_2715 65fae9f33573604f7696892ae9c2d187 391 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 118 1.2E-21 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Patl_2715 65fae9f33573604f7696892ae9c2d187 391 SUPERFAMILY SSF47203 235 387 2.42E-53 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_2715 65fae9f33573604f7696892ae9c2d187 391 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 224 1.8E-23 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Patl_2715 65fae9f33573604f7696892ae9c2d187 391 Gene3D G3DSA:1.10.540.10 2 119 1.3E-24 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 Gene3D G3DSA:3.40.50.880 9 206 9.6E-56 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 Gene3D G3DSA:3.30.300.10 406 525 3.1E-51 T 11-10-2018 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 5.1E-6 T 11-10-2018 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 5.1E-6 T 11-10-2018 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 5.1E-6 T 11-10-2018 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 7.5E-82 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 SUPERFAMILY SSF54810 405 525 4.97E-51 T 11-10-2018 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 SUPERFAMILY SSF52317 8 237 1.53E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.4E-7 T 11-10-2018 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.4E-7 T 11-10-2018 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.4E-7 T 11-10-2018 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 8.0E-155 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 Gene3D G3DSA:3.40.50.620 209 405 4.8E-75 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.0 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 4.9E-42 T 11-10-2018 IPR017926 Glutamine amidotransferase Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 SUPERFAMILY SSF52402 197 420 8.82E-59 T 11-10-2018 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 Pfam PF00958 GMP synthase C terminal domain 433 524 1.1E-43 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 4.4E-6 T 11-10-2018 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 4.4E-6 T 11-10-2018 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 4.4E-6 T 11-10-2018 Patl_3119 728377edc9e9c012d27699bb03c1ab44 525 Pfam PF02540 NAD synthase 217 292 2.6E-7 T 11-10-2018 IPR022310 NAD/GMP synthase Patl_0949 4fd06d224622aee1e57401264ea15175 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 3.3E-30 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Patl_0949 4fd06d224622aee1e57401264ea15175 385 SUPERFAMILY SSF47203 225 379 4.35E-59 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_0949 4fd06d224622aee1e57401264ea15175 385 SUPERFAMILY SSF56645 1 240 6.15E-81 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_0949 4fd06d224622aee1e57401264ea15175 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Patl_0949 4fd06d224622aee1e57401264ea15175 385 Gene3D G3DSA:1.20.140.10 232 382 5.7E-54 T 11-10-2018 Patl_0949 4fd06d224622aee1e57401264ea15175 385 Gene3D G3DSA:2.40.110.10 120 231 8.0E-43 T 11-10-2018 Patl_0949 4fd06d224622aee1e57401264ea15175 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 1.3E-25 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Patl_0949 4fd06d224622aee1e57401264ea15175 385 PIRSF PIRSF016578 3 192 1.5E-8 T 11-10-2018 Patl_0949 4fd06d224622aee1e57401264ea15175 385 PIRSF PIRSF016578 217 384 5.7E-13 T 11-10-2018 Patl_0949 4fd06d224622aee1e57401264ea15175 385 Gene3D G3DSA:1.10.540.10 1 117 2.0E-36 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Patl_0949 4fd06d224622aee1e57401264ea15175 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Patl_0949 4fd06d224622aee1e57401264ea15175 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 1.1E-48 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_3287 f3d8f2b7db493c460d2569320f9f175c 208 SUPERFAMILY SSF52972 6 198 1.07E-73 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Patl_3287 f3d8f2b7db493c460d2569320f9f175c 208 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 8 198 1.9E-64 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Patl_3287 f3d8f2b7db493c460d2569320f9f175c 208 Pfam PF01725 Ham1 family 9 196 7.8E-59 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Patl_3287 f3d8f2b7db493c460d2569320f9f175c 208 Gene3D G3DSA:3.90.950.10 5 203 1.3E-79 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Patl_3287 f3d8f2b7db493c460d2569320f9f175c 208 Hamap MF_01405 dITP/XTP pyrophosphatase. 7 201 49.845 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Patl_2932 407268166df2446cc05edb7a536dfb0e 420 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 17 388 1.8E-151 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Patl_2932 407268166df2446cc05edb7a536dfb0e 420 SUPERFAMILY SSF53448 14 384 2.09E-76 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_2932 407268166df2446cc05edb7a536dfb0e 420 Gene3D G3DSA:3.90.550.10 7 291 1.4E-86 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_2932 407268166df2446cc05edb7a536dfb0e 420 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 13 415 48.824 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Patl_2932 407268166df2446cc05edb7a536dfb0e 420 Gene3D G3DSA:2.160.10.10 292 417 8.6E-37 T 11-10-2018 Patl_2932 407268166df2446cc05edb7a536dfb0e 420 SUPERFAMILY SSF51161 302 412 6.93E-18 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Patl_2932 407268166df2446cc05edb7a536dfb0e 420 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 108 116 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Patl_2932 407268166df2446cc05edb7a536dfb0e 420 Pfam PF00483 Nucleotidyl transferase 18 281 4.3E-62 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Patl_2932 407268166df2446cc05edb7a536dfb0e 420 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 22 41 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Patl_2932 407268166df2446cc05edb7a536dfb0e 420 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 207 217 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Patl_1375 958c160837533fa827eaad081acfcd97 593 SMART SM00642 64 505 1.4E-72 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_1375 958c160837533fa827eaad081acfcd97 593 Gene3D G3DSA:2.60.40.1180 508 591 3.9E-10 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_1375 958c160837533fa827eaad081acfcd97 593 SUPERFAMILY SSF51445 58 512 2.05E-85 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_1375 958c160837533fa827eaad081acfcd97 593 SUPERFAMILY SSF51011 517 592 1.54E-10 T 11-10-2018 Patl_1375 958c160837533fa827eaad081acfcd97 593 PRINTS PR00110 Alpha-amylase signature 392 404 5.9E-5 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Patl_1375 958c160837533fa827eaad081acfcd97 593 PRINTS PR00110 Alpha-amylase signature 172 183 5.9E-5 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Patl_1375 958c160837533fa827eaad081acfcd97 593 PRINTS PR00110 Alpha-amylase signature 291 302 5.9E-5 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Patl_1375 958c160837533fa827eaad081acfcd97 593 Pfam PF00128 Alpha amylase, catalytic domain 102 453 5.7E-73 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_1375 958c160837533fa827eaad081acfcd97 593 Gene3D G3DSA:3.20.20.80 50 475 6.4E-101 T 11-10-2018 Patl_2262 59d735319bb50ff47150691bacdd9ff3 90 Pfam PF01381 Helix-turn-helix 12 56 3.6E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_2262 59d735319bb50ff47150691bacdd9ff3 90 SMART SM00530 11 70 4.1E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_2262 59d735319bb50ff47150691bacdd9ff3 90 SUPERFAMILY SSF47413 6 51 1.49E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_2262 59d735319bb50ff47150691bacdd9ff3 90 Gene3D G3DSA:1.10.260.40 4 66 3.6E-11 T 11-10-2018 Patl_0985 fd3e270a4c1a463d989e4e876c4225b0 135 Pfam PF02142 MGS-like domain 29 108 1.9E-15 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Patl_0985 fd3e270a4c1a463d989e4e876c4225b0 135 Gene3D G3DSA:3.40.50.1380 1 135 7.1E-60 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Patl_0985 fd3e270a4c1a463d989e4e876c4225b0 135 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 1 126 2.7E-55 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Patl_0985 fd3e270a4c1a463d989e4e876c4225b0 135 SMART SM00851 16 109 2.2E-19 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain Patl_0985 fd3e270a4c1a463d989e4e876c4225b0 135 ProSitePatterns PS01335 Methylglyoxal synthase active site. 56 64 - T 11-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Patl_0985 fd3e270a4c1a463d989e4e876c4225b0 135 SUPERFAMILY SSF52335 2 126 2.38E-52 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Patl_0985 fd3e270a4c1a463d989e4e876c4225b0 135 PIRSF PIRSF006614 1 134 4.0E-62 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Patl_0985 fd3e270a4c1a463d989e4e876c4225b0 135 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 3 122 33.395 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 Patl_3795 a57c1be7ecc0ed526313b5947cd8aaa1 880 Pfam PF00593 TonB dependent receptor 320 877 3.8E-28 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3795 a57c1be7ecc0ed526313b5947cd8aaa1 880 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 11-10-2018 IPR010916 TonB box, conserved site Patl_3795 a57c1be7ecc0ed526313b5947cd8aaa1 880 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 165 1.7E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3795 a57c1be7ecc0ed526313b5947cd8aaa1 880 Gene3D G3DSA:2.40.170.20 565 880 4.3E-47 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_3795 a57c1be7ecc0ed526313b5947cd8aaa1 880 SUPERFAMILY SSF56935 36 880 5.84E-98 T 11-10-2018 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 Gene3D G3DSA:3.30.930.10 486 690 6.4E-55 T 11-10-2018 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 SUPERFAMILY SSF56037 200 396 2.07E-72 T 11-10-2018 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 SUPERFAMILY SSF55681 467 688 8.45E-47 T 11-10-2018 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 Gene3D G3DSA:3.50.40.10 197 395 8.9E-77 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 45.563 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 Gene3D G3DSA:3.30.56.10 401 475 5.3E-25 T 11-10-2018 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 SMART SM00873 212 385 5.8E-95 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 2.9E-270 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 SMART SM00896 701 794 1.5E-43 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 SUPERFAMILY SSF54991 696 794 1.57E-29 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 2.8E-26 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 Pfam PF01588 Putative tRNA binding domain 45 145 6.0E-27 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 Gene3D G3DSA:3.30.70.380 702 795 4.0E-28 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 Gene3D G3DSA:3.30.56.10 7 179 1.2E-75 T 11-10-2018 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 SMART SM00874 403 471 1.1E-27 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 SUPERFAMILY SSF50249 35 190 4.57E-51 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 Gene3D G3DSA:2.40.50.140 39 154 1.2E-75 T 11-10-2018 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 SUPERFAMILY SSF46955 406 475 1.74E-19 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 Pfam PF03484 tRNA synthetase B5 domain 407 471 1.6E-19 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Patl_2494 d537ec3c83a8b900cfda6486342776d8 795 Pfam PF03483 B3/4 domain 212 385 5.7E-68 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Patl_4036 a9c542a681566de6869570c635d78d52 299 Pfam PF10987 Protein of unknown function (DUF2806) 70 289 1.1E-78 T 11-10-2018 IPR021254 Protein of unknown function DUF2806 Patl_4036 a9c542a681566de6869570c635d78d52 299 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 49 298 1.1E-95 T 11-10-2018 IPR021254 Protein of unknown function DUF2806 Patl_2988 a39537a287052b38f6b3acec27ba052e 174 Pfam PF01618 MotA/TolQ/ExbB proton channel family 64 164 1.0E-21 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Patl_0084 e4940d7cb93f6b2f3d012d6b75d9f2e1 592 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 592 34.878 T 11-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 Patl_0084 e4940d7cb93f6b2f3d012d6b75d9f2e1 592 Gene3D G3DSA:2.60.40.1250 28 162 3.4E-42 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Patl_0084 e4940d7cb93f6b2f3d012d6b75d9f2e1 592 Pfam PF13899 Thioredoxin-like 481 564 5.1E-14 T 11-10-2018 Patl_0084 e4940d7cb93f6b2f3d012d6b75d9f2e1 592 SUPERFAMILY SSF74863 33 148 1.57E-39 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily Patl_0084 e4940d7cb93f6b2f3d012d6b75d9f2e1 592 Gene3D G3DSA:3.40.30.10 465 591 1.4E-30 T 11-10-2018 Patl_0084 e4940d7cb93f6b2f3d012d6b75d9f2e1 592 SUPERFAMILY SSF52833 471 587 9.59E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_0084 e4940d7cb93f6b2f3d012d6b75d9f2e1 592 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 196 397 2.1E-18 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Patl_0084 e4940d7cb93f6b2f3d012d6b75d9f2e1 592 ProSitePatterns PS00194 Thioredoxin family active site. 500 518 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Patl_0084 e4940d7cb93f6b2f3d012d6b75d9f2e1 592 Pfam PF11412 Disulphide bond corrector protein DsbC 35 146 5.6E-32 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain Patl_2647 f76bacf5e6e76d6278242239abe63b49 231 Gene3D G3DSA:1.10.10.10 17 81 5.9E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2647 f76bacf5e6e76d6278242239abe63b49 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 80 1.3E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2647 f76bacf5e6e76d6278242239abe63b49 231 SUPERFAMILY SSF46785 20 84 6.75E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2647 f76bacf5e6e76d6278242239abe63b49 231 SMART SM00345 22 80 6.1E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2647 f76bacf5e6e76d6278242239abe63b49 231 Pfam PF07729 FCD domain 90 211 4.1E-13 T 11-10-2018 IPR011711 GntR, C-terminal Patl_2647 f76bacf5e6e76d6278242239abe63b49 231 SUPERFAMILY SSF48008 88 217 6.8E-15 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_2647 f76bacf5e6e76d6278242239abe63b49 231 SMART SM00895 90 213 9.7E-9 T 11-10-2018 IPR011711 GntR, C-terminal Patl_2647 f76bacf5e6e76d6278242239abe63b49 231 Gene3D G3DSA:1.20.120.530 83 218 3.5E-15 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 SUPERFAMILY SSF55781 165 340 9.6E-25 T 11-10-2018 Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 Pfam PF00563 EAL domain 529 764 1.4E-73 T 11-10-2018 IPR001633 EAL domain Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 Pfam PF13185 GAF domain 198 339 1.9E-11 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 SMART SM00052 522 769 8.1E-100 T 11-10-2018 IPR001633 EAL domain Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 SUPERFAMILY SSF55073 356 514 8.63E-51 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 SUPERFAMILY SSF141868 528 777 1.96E-86 T 11-10-2018 IPR035919 EAL domain superfamily Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 349 511 4.5E-46 T 11-10-2018 IPR000160 GGDEF domain Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 Gene3D G3DSA:3.30.450.40 197 346 1.6E-21 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 Gene3D G3DSA:3.20.20.450 524 780 8.4E-94 T 11-10-2018 IPR035919 EAL domain superfamily Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 SMART SM00065 198 348 0.0053 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 SMART SM00065 26 167 1.2E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 Pfam PF01590 GAF domain 28 157 1.2E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 Gene3D G3DSA:3.30.450.40 11 171 5.2E-14 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 Pfam PF00990 Diguanylate cyclase, GGDEF domain 351 508 2.5E-52 T 11-10-2018 IPR000160 GGDEF domain Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 PIRSF PIRSF005925 143 780 1.2E-161 T 11-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 SUPERFAMILY SSF55781 28 169 3.49E-22 T 11-10-2018 Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 SMART SM00267 340 512 6.0E-63 T 11-10-2018 IPR000160 GGDEF domain Patl_2253 9f9a8e58a200b8b2322699dc04b1d18d 780 Gene3D G3DSA:3.30.70.270 347 523 1.2E-62 T 11-10-2018 Patl_1647 15961d4b7a5cecd941195e6c782bb501 575 Gene3D G3DSA:3.30.70.1450 291 365 5.9E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Patl_1647 15961d4b7a5cecd941195e6c782bb501 575 Gene3D G3DSA:3.30.70.1450 205 280 2.2E-11 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Patl_1647 15961d4b7a5cecd941195e6c782bb501 575 Pfam PF02080 TrkA-C domain 211 275 1.6E-7 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Patl_1647 15961d4b7a5cecd941195e6c782bb501 575 Pfam PF02080 TrkA-C domain 294 355 8.2E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Patl_1647 15961d4b7a5cecd941195e6c782bb501 575 Pfam PF03600 Citrate transporter 18 521 8.0E-33 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 Patl_1647 15961d4b7a5cecd941195e6c782bb501 575 SUPERFAMILY SSF116726 292 360 5.49E-15 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Patl_1647 15961d4b7a5cecd941195e6c782bb501 575 SUPERFAMILY SSF116726 203 283 1.44E-14 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Patl_3090 1fcc01355658d2ba2572f72bf8e13cf8 408 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 407 8.0E-78 T 11-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 Patl_3090 1fcc01355658d2ba2572f72bf8e13cf8 408 Gene3D G3DSA:1.20.1330.10 265 383 3.6E-11 T 11-10-2018 Patl_3090 1fcc01355658d2ba2572f72bf8e13cf8 408 Gene3D G3DSA:1.20.1330.10 40 253 2.1E-43 T 11-10-2018 Patl_3090 1fcc01355658d2ba2572f72bf8e13cf8 408 Pfam PF00700 Bacterial flagellin C-terminal helical region 329 407 4.6E-5 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Patl_3090 1fcc01355658d2ba2572f72bf8e13cf8 408 SUPERFAMILY SSF64518 1 407 2.35E-78 T 11-10-2018 Patl_3090 1fcc01355658d2ba2572f72bf8e13cf8 408 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 5.3E-23 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 SMART SM01211 1039 1294 1.4E-157 T 11-10-2018 Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 Gene3D G3DSA:3.30.1330.10 213 420 1.0E-40 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1295 21.162 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1040 1293 1.2E-108 T 11-10-2018 Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 Gene3D G3DSA:3.40.50.880 979 1295 5.6E-137 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 431 587 1.1E-29 T 11-10-2018 IPR010918 PurM-like, C-terminal domain Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 836 964 1.1E-10 T 11-10-2018 IPR010918 PurM-like, C-terminal domain Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 SUPERFAMILY SSF56042 821 1033 2.84E-50 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 SUPERFAMILY SSF55326 620 815 3.14E-66 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 SUPERFAMILY SSF82697 1 151 6.28E-49 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 Gene3D G3DSA:3.90.650.10 421 605 3.2E-54 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 Gene3D G3DSA:3.90.650.10 809 978 5.4E-30 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 SUPERFAMILY SSF109736 154 219 4.32E-21 T 11-10-2018 Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 SUPERFAMILY SSF56042 431 614 4.34E-53 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1293 0.0 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 Gene3D G3DSA:1.10.8.750 152 212 3.3E-26 T 11-10-2018 Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 SUPERFAMILY SSF55326 220 427 1.12E-62 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 SUPERFAMILY SSF52317 1036 1294 1.06E-96 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_3113 592819b729c23c47da7cb642e2d4789e 1295 Gene3D G3DSA:3.30.1330.10 614 808 5.8E-22 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Patl_3960 5d09cae83847ff25ddff7701540d3854 965 Pfam PF00990 Diguanylate cyclase, GGDEF domain 531 688 1.8E-37 T 11-10-2018 IPR000160 GGDEF domain Patl_3960 5d09cae83847ff25ddff7701540d3854 965 SMART SM00267 520 692 2.1E-48 T 11-10-2018 IPR000160 GGDEF domain Patl_3960 5d09cae83847ff25ddff7701540d3854 965 SMART SM00052 704 951 8.2E-62 T 11-10-2018 IPR001633 EAL domain Patl_3960 5d09cae83847ff25ddff7701540d3854 965 Gene3D G3DSA:3.30.70.270 522 692 5.6E-50 T 11-10-2018 Patl_3960 5d09cae83847ff25ddff7701540d3854 965 Pfam PF00563 EAL domain 711 946 1.2E-56 T 11-10-2018 IPR001633 EAL domain Patl_3960 5d09cae83847ff25ddff7701540d3854 965 SUPERFAMILY SSF55785 399 518 1.92E-8 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3960 5d09cae83847ff25ddff7701540d3854 965 SUPERFAMILY SSF55073 536 693 8.63E-43 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3960 5d09cae83847ff25ddff7701540d3854 965 Gene3D G3DSA:2.60.40.2380 45 184 1.6E-16 T 11-10-2018 Patl_3960 5d09cae83847ff25ddff7701540d3854 965 Gene3D G3DSA:3.20.20.450 693 953 3.8E-74 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3960 5d09cae83847ff25ddff7701540d3854 965 Pfam PF07695 7TM diverse intracellular signalling 189 383 6.3E-7 T 11-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 Patl_3960 5d09cae83847ff25ddff7701540d3854 965 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 527 690 1.7E-41 T 11-10-2018 IPR000160 GGDEF domain Patl_3960 5d09cae83847ff25ddff7701540d3854 965 Pfam PF07696 7TMR-DISM extracellular 2 55 173 9.5E-17 T 11-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 Patl_3960 5d09cae83847ff25ddff7701540d3854 965 Gene3D G3DSA:3.30.450.20 401 521 5.1E-11 T 11-10-2018 Patl_3960 5d09cae83847ff25ddff7701540d3854 965 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 405 523 5.4E-8 T 11-10-2018 IPR000014 PAS domain Patl_3960 5d09cae83847ff25ddff7701540d3854 965 SUPERFAMILY SSF141868 711 953 2.09E-65 T 11-10-2018 IPR035919 EAL domain superfamily Patl_2859 f891d30c84a2c81bef0853ac5cd15a8c 661 SUPERFAMILY SSF51445 23 370 3.58E-84 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_2859 f891d30c84a2c81bef0853ac5cd15a8c 661 SUPERFAMILY SSF51011 375 466 1.92E-30 T 11-10-2018 Patl_2859 f891d30c84a2c81bef0853ac5cd15a8c 661 SMART SM00632 378 465 7.2E-34 T 11-10-2018 IPR031319 Alpha-amylase, C-terminal domain Reactome: R-HSA-189085 Patl_2859 f891d30c84a2c81bef0853ac5cd15a8c 661 Gene3D G3DSA:3.20.20.80 23 373 2.7E-164 T 11-10-2018 Patl_2859 f891d30c84a2c81bef0853ac5cd15a8c 661 SMART SM00642 25 368 2.1E-84 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_2859 f891d30c84a2c81bef0853ac5cd15a8c 661 Pfam PF00128 Alpha amylase, catalytic domain 84 295 3.5E-9 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_2859 f891d30c84a2c81bef0853ac5cd15a8c 661 Gene3D G3DSA:2.60.40.1180 374 466 2.7E-32 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_2859 f891d30c84a2c81bef0853ac5cd15a8c 661 PRINTS PR00110 Alpha-amylase signature 68 85 1.5E-30 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Patl_2859 f891d30c84a2c81bef0853ac5cd15a8c 661 PRINTS PR00110 Alpha-amylase signature 273 285 1.5E-30 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Patl_2859 f891d30c84a2c81bef0853ac5cd15a8c 661 PRINTS PR00110 Alpha-amylase signature 187 198 1.5E-30 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Patl_2859 f891d30c84a2c81bef0853ac5cd15a8c 661 PRINTS PR00110 Alpha-amylase signature 215 233 1.5E-30 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Patl_2859 f891d30c84a2c81bef0853ac5cd15a8c 661 PRINTS PR00110 Alpha-amylase signature 100 111 1.5E-30 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 Patl_2859 f891d30c84a2c81bef0853ac5cd15a8c 661 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 381 462 3.6E-12 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Patl_2887 a72bd3d8170bb5c2c29826594337caab 257 SUPERFAMILY SSF51366 1 256 1.02E-67 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Patl_2887 a72bd3d8170bb5c2c29826594337caab 257 Gene3D G3DSA:3.20.20.70 1 257 7.5E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2887 a72bd3d8170bb5c2c29826594337caab 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.3E-108 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Patl_2887 a72bd3d8170bb5c2c29826594337caab 257 Pfam PF00977 Histidine biosynthesis protein 5 239 1.2E-73 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Patl_2887 a72bd3d8170bb5c2c29826594337caab 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 42.685 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Patl_1333 10795a9980a546cbc2a26cccc4d841e7 223 Gene3D G3DSA:2.60.120.10 111 202 4.8E-21 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_1333 10795a9980a546cbc2a26cccc4d841e7 223 Pfam PF12973 ChrR Cupin-like domain 118 197 2.4E-12 T 11-10-2018 IPR025979 ChrR-like cupin domain Patl_1333 10795a9980a546cbc2a26cccc4d841e7 223 Gene3D G3DSA:1.10.10.1320 1 110 9.7E-12 T 11-10-2018 Patl_1333 10795a9980a546cbc2a26cccc4d841e7 223 SUPERFAMILY SSF51182 117 206 8.7E-12 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_1333 10795a9980a546cbc2a26cccc4d841e7 223 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 5 219 1.1E-50 T 11-10-2018 IPR012807 Anti-sigma factor ChrR, putative Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 Gene3D G3DSA:3.40.50.2300 522 661 1.5E-41 T 11-10-2018 Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 SUPERFAMILY SSF52172 535 661 6.69E-36 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 SMART SM00448 539 658 5.5E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 SMART SM00387 400 516 1.6E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 Pfam PF01590 GAF domain 32 132 1.1E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 Gene3D G3DSA:3.30.565.10 352 520 3.6E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 Gene3D G3DSA:1.10.287.130 266 351 1.0E-23 T 11-10-2018 Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 SUPERFAMILY SSF55874 342 512 3.41E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 SUPERFAMILY SSF47384 274 354 1.86E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 SMART SM00388 288 353 2.5E-22 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 Pfam PF00072 Response regulator receiver domain 541 658 7.1E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 SUPERFAMILY SSF55785 162 268 5.86E-10 T 11-10-2018 IPR035965 PAS domain superfamily Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 Gene3D G3DSA:3.30.450.20 202 265 2.9E-5 T 11-10-2018 Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 SUPERFAMILY SSF55781 4 144 1.26E-15 T 11-10-2018 Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 SMART SM00086 227 268 0.0051 T 11-10-2018 IPR001610 PAC motif Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 Gene3D G3DSA:3.30.450.40 2 147 7.4E-13 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 Gene3D G3DSA:3.30.450.20 163 201 2.3E-5 T 11-10-2018 Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 400 512 3.6E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 455 5.6E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 513 5.6E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 469 5.6E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 494 5.6E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2664 2e23695ccbe0323c9d2adba068421f17 662 Pfam PF00512 His Kinase A (phospho-acceptor) domain 289 353 2.7E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_0729 c3ed51c64691211a2686ba08a339a6ce 668 SUPERFAMILY SSF52540 446 625 1.62E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0729 c3ed51c64691211a2686ba08a339a6ce 668 Gene3D G3DSA:3.40.50.300 198 350 1.2E-15 T 11-10-2018 Patl_0729 c3ed51c64691211a2686ba08a339a6ce 668 Gene3D G3DSA:3.40.50.300 419 606 4.4E-36 T 11-10-2018 Patl_0729 c3ed51c64691211a2686ba08a339a6ce 668 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 222 348 3.0E-10 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Patl_0729 c3ed51c64691211a2686ba08a339a6ce 668 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 464 585 1.2E-28 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Patl_0729 c3ed51c64691211a2686ba08a339a6ce 668 SMART SM00382 460 589 8.7E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0729 c3ed51c64691211a2686ba08a339a6ce 668 SMART SM00382 218 352 1.2E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0729 c3ed51c64691211a2686ba08a339a6ce 668 SUPERFAMILY SSF52540 207 368 1.08E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4035 0134c6dbdc29632744a8259257c7e6cc 746 Pfam PF00072 Response regulator receiver domain 31 150 2.6E-5 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4035 0134c6dbdc29632744a8259257c7e6cc 746 Gene3D G3DSA:3.30.70.270 318 489 2.5E-31 T 11-10-2018 Patl_4035 0134c6dbdc29632744a8259257c7e6cc 746 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 321 474 8.7E-16 T 11-10-2018 IPR000160 GGDEF domain Patl_4035 0134c6dbdc29632744a8259257c7e6cc 746 Gene3D G3DSA:3.20.20.450 490 738 1.4E-87 T 11-10-2018 IPR035919 EAL domain superfamily Patl_4035 0134c6dbdc29632744a8259257c7e6cc 746 SUPERFAMILY SSF52172 28 162 2.13E-11 T 11-10-2018 IPR011006 CheY-like superfamily Patl_4035 0134c6dbdc29632744a8259257c7e6cc 746 Pfam PF00563 EAL domain 493 727 2.4E-64 T 11-10-2018 IPR001633 EAL domain Patl_4035 0134c6dbdc29632744a8259257c7e6cc 746 Pfam PF00990 Diguanylate cyclase, GGDEF domain 325 469 1.3E-20 T 11-10-2018 IPR000160 GGDEF domain Patl_4035 0134c6dbdc29632744a8259257c7e6cc 746 Gene3D G3DSA:3.40.50.2300 18 169 2.6E-13 T 11-10-2018 Patl_4035 0134c6dbdc29632744a8259257c7e6cc 746 SMART SM00267 313 477 1.2E-9 T 11-10-2018 IPR000160 GGDEF domain Patl_4035 0134c6dbdc29632744a8259257c7e6cc 746 SMART SM00052 487 732 3.4E-99 T 11-10-2018 IPR001633 EAL domain Patl_4035 0134c6dbdc29632744a8259257c7e6cc 746 SMART SM00448 29 152 0.0078 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4035 0134c6dbdc29632744a8259257c7e6cc 746 SUPERFAMILY SSF55073 329 478 5.65E-23 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_4035 0134c6dbdc29632744a8259257c7e6cc 746 SUPERFAMILY SSF141868 493 739 1.05E-80 T 11-10-2018 IPR035919 EAL domain superfamily Patl_4035 0134c6dbdc29632744a8259257c7e6cc 746 Pfam PF11849 Domain of unknown function (DUF3369) 152 320 4.5E-52 T 11-10-2018 IPR021800 Domain of unknown function DUF3369 Patl_1599 eb013eccd15d2e631ddb9789364a03be 149 Gene3D G3DSA:1.10.3680.10 1 139 4.8E-22 T 11-10-2018 IPR029024 TerB-like Patl_1599 eb013eccd15d2e631ddb9789364a03be 149 Pfam PF05099 Tellurite resistance protein TerB 8 142 9.0E-40 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal Patl_1599 eb013eccd15d2e631ddb9789364a03be 149 SUPERFAMILY SSF158682 20 142 3.66E-25 T 11-10-2018 IPR029024 TerB-like Patl_2044 0a28683d50afc75a0529e8800e84cf85 278 Pfam PF11316 Putative rhamnosyl transferase 3 221 2.7E-72 T 11-10-2018 IPR021466 Putative rhamnosyl transferase Patl_3070 87d23ed743c98978b563224749a0e256 317 Pfam PF00535 Glycosyl transferase family 2 4 125 3.3E-27 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Patl_3070 87d23ed743c98978b563224749a0e256 317 SUPERFAMILY SSF53448 2 233 6.88E-44 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3070 87d23ed743c98978b563224749a0e256 317 Gene3D G3DSA:3.90.550.10 1 251 2.5E-44 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_1638 1d7b4347b7b7ffcc2af5db7f96c44029 127 SUPERFAMILY SSF51316 2 126 1.67E-56 T 11-10-2018 IPR011057 Mss4-like superfamily Patl_1638 1d7b4347b7b7ffcc2af5db7f96c44029 127 Pfam PF01641 SelR domain 7 125 1.2E-52 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Patl_1638 1d7b4347b7b7ffcc2af5db7f96c44029 127 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 3 124 6.4E-53 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Patl_1638 1d7b4347b7b7ffcc2af5db7f96c44029 127 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 4 127 35.138 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 Patl_1638 1d7b4347b7b7ffcc2af5db7f96c44029 127 Gene3D G3DSA:2.170.150.20 1 127 1.2E-59 T 11-10-2018 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 Gene3D G3DSA:1.20.1640.10 522 1032 0.0 T 11-10-2018 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 Gene3D G3DSA:1.20.1640.10 9 521 0.0 T 11-10-2018 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 Gene3D G3DSA:3.30.70.1430 39 826 0.0 T 11-10-2018 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 SUPERFAMILY SSF82866 297 497 2.22E-51 T 11-10-2018 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1047 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 SUPERFAMILY SSF82693 574 680 1.91E-25 T 11-10-2018 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 SUPERFAMILY SSF82866 840 1036 5.36E-44 T 11-10-2018 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 2.6E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 2.6E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 PRINTS PR00702 Acriflavin resistance protein family signature 630 644 2.6E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 2.6E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.6E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 2.6E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.6E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 2.6E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 PRINTS PR00702 Acriflavin resistance protein family signature 561 578 2.6E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 Gene3D G3DSA:3.30.70.1430 576 677 0.0 T 11-10-2018 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 SUPERFAMILY SSF82714 731 815 1.57E-20 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 SUPERFAMILY SSF82714 184 272 1.03E-18 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 Gene3D G3DSA:3.30.70.1320 134 333 0.0 T 11-10-2018 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 SUPERFAMILY SSF82693 40 133 3.4E-26 T 11-10-2018 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 SUPERFAMILY SSF82693 137 331 1.05E-26 T 11-10-2018 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 Pfam PF00873 AcrB/AcrD/AcrF family 2 1035 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 SUPERFAMILY SSF82693 681 866 2.62E-29 T 11-10-2018 Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 Gene3D G3DSA:3.30.2090.10 730 818 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_4125 4f1ad5e830a9f4adc8c2730f1eccd138 1058 Gene3D G3DSA:3.30.70.1440 678 875 0.0 T 11-10-2018 Patl_3120 149fe66943ae5aa77ed68a0e1f2a8521 489 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 1.7E-190 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Patl_3120 149fe66943ae5aa77ed68a0e1f2a8521 489 Gene3D G3DSA:3.20.20.70 1 488 1.0E-208 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_3120 149fe66943ae5aa77ed68a0e1f2a8521 489 SUPERFAMILY SSF54631 95 203 2.02E-29 T 11-10-2018 Patl_3120 149fe66943ae5aa77ed68a0e1f2a8521 489 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 488 83.357 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Patl_3120 149fe66943ae5aa77ed68a0e1f2a8521 489 SMART SM01240 7 475 0.0 T 11-10-2018 Patl_3120 149fe66943ae5aa77ed68a0e1f2a8521 489 SMART SM00116 96 144 5.9E-10 T 11-10-2018 IPR000644 CBS domain Patl_3120 149fe66943ae5aa77ed68a0e1f2a8521 489 SMART SM00116 158 206 3.2E-7 T 11-10-2018 IPR000644 CBS domain Patl_3120 149fe66943ae5aa77ed68a0e1f2a8521 489 PIRSF PIRSF000130 1 489 3.2E-201 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Patl_3120 149fe66943ae5aa77ed68a0e1f2a8521 489 SUPERFAMILY SSF51412 1 479 5.1E-126 T 11-10-2018 Patl_3120 149fe66943ae5aa77ed68a0e1f2a8521 489 Pfam PF00571 CBS domain 150 203 1.5E-6 T 11-10-2018 IPR000644 CBS domain Patl_3120 149fe66943ae5aa77ed68a0e1f2a8521 489 Pfam PF00571 CBS domain 95 140 1.1E-9 T 11-10-2018 IPR000644 CBS domain Patl_3120 149fe66943ae5aa77ed68a0e1f2a8521 489 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Patl_3120 149fe66943ae5aa77ed68a0e1f2a8521 489 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 475 2.7E-159 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Patl_1642 155c13abc728e8673dcb787f510db66f 557 Pfam PF01235 Sodium:alanine symporter family 56 555 2.0E-140 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_1642 155c13abc728e8673dcb787f510db66f 557 PRINTS PR00175 Sodium/alanine symporter signature 184 202 3.7E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_1642 155c13abc728e8673dcb787f510db66f 557 PRINTS PR00175 Sodium/alanine symporter signature 212 231 3.7E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_1642 155c13abc728e8673dcb787f510db66f 557 PRINTS PR00175 Sodium/alanine symporter signature 307 325 3.7E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_1642 155c13abc728e8673dcb787f510db66f 557 PRINTS PR00175 Sodium/alanine symporter signature 93 115 3.7E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_1642 155c13abc728e8673dcb787f510db66f 557 PRINTS PR00175 Sodium/alanine symporter signature 457 479 3.7E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_1642 155c13abc728e8673dcb787f510db66f 557 PRINTS PR00175 Sodium/alanine symporter signature 516 536 3.7E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_1642 155c13abc728e8673dcb787f510db66f 557 TIGRFAM TIGR00835 agcS: amino acid carrier protein 21 547 9.3E-177 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_3749 3498c8a948143cc874b03bf9e89aaac1 471 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 471 1.4E-238 T 11-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 Patl_3749 3498c8a948143cc874b03bf9e89aaac1 471 SUPERFAMILY SSF46548 6 157 2.72E-40 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Patl_3749 3498c8a948143cc874b03bf9e89aaac1 471 Gene3D G3DSA:1.10.1060.10 14 146 2.4E-33 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Patl_3749 3498c8a948143cc874b03bf9e89aaac1 471 Gene3D G3DSA:3.50.50.60 251 399 1.6E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3749 3498c8a948143cc874b03bf9e89aaac1 471 SUPERFAMILY SSF51971 145 400 3.65E-66 T 11-10-2018 Patl_3749 3498c8a948143cc874b03bf9e89aaac1 471 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 3.4E-35 T 11-10-2018 Patl_3749 3498c8a948143cc874b03bf9e89aaac1 471 PRINTS PR00419 Adrenodoxin reductase family signature 289 303 3.4E-35 T 11-10-2018 Patl_3749 3498c8a948143cc874b03bf9e89aaac1 471 PRINTS PR00419 Adrenodoxin reductase family signature 323 336 3.4E-35 T 11-10-2018 Patl_3749 3498c8a948143cc874b03bf9e89aaac1 471 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 3.4E-35 T 11-10-2018 Patl_3749 3498c8a948143cc874b03bf9e89aaac1 471 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 3.4E-35 T 11-10-2018 Patl_3749 3498c8a948143cc874b03bf9e89aaac1 471 Gene3D G3DSA:3.40.50.720 147 250 3.1E-13 T 11-10-2018 Patl_3749 3498c8a948143cc874b03bf9e89aaac1 471 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 6.1E-37 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Patl_3749 3498c8a948143cc874b03bf9e89aaac1 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 458 7.3E-22 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Patl_1717 fa886ebb687b86ceb96dad2d21aea078 458 Pfam PF00939 Sodium:sulfate symporter transmembrane region 31 449 8.5E-63 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Patl_1717 fa886ebb687b86ceb96dad2d21aea078 458 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 455 2.7E-80 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 Patl_1029 aba97e956c3ef52e1f28ed5bbe1c0be9 379 SMART SM00073 10 107 2.5E-10 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Patl_1029 aba97e956c3ef52e1f28ed5bbe1c0be9 379 Pfam PF01627 Hpt domain 13 101 3.3E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Patl_1029 aba97e956c3ef52e1f28ed5bbe1c0be9 379 SUPERFAMILY SSF109604 200 370 3.45E-19 T 11-10-2018 Patl_1029 aba97e956c3ef52e1f28ed5bbe1c0be9 379 SUPERFAMILY SSF47226 10 119 9.42E-20 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Patl_1029 aba97e956c3ef52e1f28ed5bbe1c0be9 379 Gene3D G3DSA:1.10.3210.10 196 377 1.4E-39 T 11-10-2018 Patl_1029 aba97e956c3ef52e1f28ed5bbe1c0be9 379 Gene3D G3DSA:1.20.120.160 7 148 1.7E-23 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Patl_1029 aba97e956c3ef52e1f28ed5bbe1c0be9 379 Pfam PF13487 HD domain 261 323 1.1E-16 T 11-10-2018 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 SUPERFAMILY SSF82693 554 654 2.25E-11 T 11-10-2018 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 Gene3D G3DSA:3.30.2090.10 701 790 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 SUPERFAMILY SSF82693 40 134 1.1E-25 T 11-10-2018 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.9E-74 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.9E-74 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.9E-74 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.9E-74 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.9E-74 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.9E-74 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.9E-74 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 3.9E-74 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 SUPERFAMILY SSF82866 291 488 2.35E-48 T 11-10-2018 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 Gene3D G3DSA:1.20.1640.10 502 1004 0.0 T 11-10-2018 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 SUPERFAMILY SSF82693 135 324 8.89E-23 T 11-10-2018 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 Gene3D G3DSA:3.30.70.1440 652 847 0.0 T 11-10-2018 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 11-10-2018 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 SUPERFAMILY SSF82714 182 266 7.85E-19 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 SUPERFAMILY SSF82714 702 787 4.71E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 SUPERFAMILY SSF82866 791 1009 4.71E-50 T 11-10-2018 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 Pfam PF00873 AcrB/AcrD/AcrF family 4 1007 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 Gene3D G3DSA:3.30.70.1430 556 651 0.0 T 11-10-2018 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 Gene3D G3DSA:3.30.70.1430 40 798 0.0 T 11-10-2018 Patl_1037 01aef489ce1d45d54fd0475718407c3f 1036 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 11-10-2018 Patl_0668 63874e97db075af680ba2e8011a63467 177 PIRSF PIRSF016481 1 172 3.7E-44 T 11-10-2018 IPR007446 Pilus assembly protein PilP Patl_0668 63874e97db075af680ba2e8011a63467 177 Pfam PF04351 Pilus assembly protein, PilP 22 168 3.5E-47 T 11-10-2018 IPR007446 Pilus assembly protein PilP Patl_0668 63874e97db075af680ba2e8011a63467 177 Gene3D G3DSA:2.30.30.830 76 169 1.2E-26 T 11-10-2018 Patl_2998 8c75eed03f2deeb4267f023b93f54f0f 518 Gene3D G3DSA:1.10.8.60 377 453 3.2E-20 T 11-10-2018 Patl_2998 8c75eed03f2deeb4267f023b93f54f0f 518 Pfam PF00158 Sigma-54 interaction domain 208 371 4.8E-61 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Patl_2998 8c75eed03f2deeb4267f023b93f54f0f 518 SUPERFAMILY SSF55021 2 69 7.63E-6 T 11-10-2018 Patl_2998 8c75eed03f2deeb4267f023b93f54f0f 518 SMART SM00091 80 146 2.7E-6 T 11-10-2018 IPR000014 PAS domain Patl_2998 8c75eed03f2deeb4267f023b93f54f0f 518 Gene3D G3DSA:3.30.450.20 82 190 1.3E-23 T 11-10-2018 Patl_2998 8c75eed03f2deeb4267f023b93f54f0f 518 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Patl_2998 8c75eed03f2deeb4267f023b93f54f0f 518 SUPERFAMILY SSF46689 456 512 1.49E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_2998 8c75eed03f2deeb4267f023b93f54f0f 518 SMART SM00382 226 369 1.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2998 8c75eed03f2deeb4267f023b93f54f0f 518 SUPERFAMILY SSF52540 209 446 1.82E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2998 8c75eed03f2deeb4267f023b93f54f0f 518 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 4.1E-27 T 11-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 Patl_2998 8c75eed03f2deeb4267f023b93f54f0f 518 Pfam PF00989 PAS fold 81 129 1.9E-7 T 11-10-2018 IPR013767 PAS fold GO:0006355 Patl_2998 8c75eed03f2deeb4267f023b93f54f0f 518 Gene3D G3DSA:3.40.50.300 195 376 4.1E-62 T 11-10-2018 Patl_2998 8c75eed03f2deeb4267f023b93f54f0f 518 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 291 306 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Patl_2998 8c75eed03f2deeb4267f023b93f54f0f 518 SUPERFAMILY SSF55785 79 174 2.27E-10 T 11-10-2018 IPR035965 PAS domain superfamily Patl_2998 8c75eed03f2deeb4267f023b93f54f0f 518 Gene3D G3DSA:3.30.70.260 1 81 6.8E-28 T 11-10-2018 Patl_2998 8c75eed03f2deeb4267f023b93f54f0f 518 Gene3D G3DSA:1.10.10.60 455 513 9.3E-26 T 11-10-2018 Patl_0739 b5f85acb1af061cbca92b7b926e3690c 371 Gene3D G3DSA:2.40.30.170 47 288 3.4E-93 T 11-10-2018 Patl_0739 b5f85acb1af061cbca92b7b926e3690c 371 Gene3D G3DSA:2.40.50.100 60 192 3.4E-93 T 11-10-2018 Patl_0739 b5f85acb1af061cbca92b7b926e3690c 371 SUPERFAMILY SSF111369 49 282 1.7E-68 T 11-10-2018 Patl_0739 b5f85acb1af061cbca92b7b926e3690c 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 360 3.3E-69 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Patl_0739 b5f85acb1af061cbca92b7b926e3690c 371 Pfam PF13533 Biotin-lipoyl like 61 108 7.5E-15 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Patl_0739 b5f85acb1af061cbca92b7b926e3690c 371 Gene3D G3DSA:2.40.420.20 289 358 3.4E-93 T 11-10-2018 Patl_0739 b5f85acb1af061cbca92b7b926e3690c 371 Gene3D G3DSA:1.10.287.470 95 154 3.4E-93 T 11-10-2018 Patl_3829 1becf14afd34c97b58726dec14a35463 465 Pfam PF02562 PhoH-like protein 255 459 1.9E-53 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 Patl_3829 1becf14afd34c97b58726dec14a35463 465 SUPERFAMILY SSF88723 11 158 7.85E-15 T 11-10-2018 IPR029060 PIN-like domain superfamily Patl_3829 1becf14afd34c97b58726dec14a35463 465 SUPERFAMILY SSF52540 254 444 1.87E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3829 1becf14afd34c97b58726dec14a35463 465 SMART SM00382 273 438 0.0028 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3829 1becf14afd34c97b58726dec14a35463 465 Gene3D G3DSA:3.40.50.1010 6 162 3.0E-24 T 11-10-2018 Patl_3829 1becf14afd34c97b58726dec14a35463 465 Pfam PF13638 PIN domain 12 157 4.7E-33 T 11-10-2018 IPR002716 PIN domain Patl_3829 1becf14afd34c97b58726dec14a35463 465 Gene3D G3DSA:3.40.50.300 253 463 3.5E-65 T 11-10-2018 Patl_3829 1becf14afd34c97b58726dec14a35463 465 SMART SM00670 10 148 8.1E-6 T 11-10-2018 IPR002716 PIN domain Patl_3783 d0441ea3db593522b093f7291167981a 415 SUPERFAMILY SSF47203 254 410 1.59E-37 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_3783 d0441ea3db593522b093f7291167981a 415 Gene3D G3DSA:2.40.110.10 142 256 6.7E-45 T 11-10-2018 Patl_3783 d0441ea3db593522b093f7291167981a 415 Gene3D G3DSA:1.10.540.10 6 141 2.6E-44 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Patl_3783 d0441ea3db593522b093f7291167981a 415 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 143 240 2.2E-19 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Patl_3783 d0441ea3db593522b093f7291167981a 415 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 21 139 6.2E-15 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Patl_3783 d0441ea3db593522b093f7291167981a 415 SUPERFAMILY SSF56645 8 269 4.97E-67 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_3783 d0441ea3db593522b093f7291167981a 415 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 256 405 1.7E-28 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_3783 d0441ea3db593522b093f7291167981a 415 Gene3D G3DSA:1.20.140.10 257 414 2.0E-31 T 11-10-2018 Patl_3950 b39cb419a58646af25b9aa569e68c68b 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 3.1E-60 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Patl_3950 b39cb419a58646af25b9aa569e68c68b 145 SUPERFAMILY SSF69500 1 144 8.11E-53 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Patl_3950 b39cb419a58646af25b9aa569e68c68b 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 33.089 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Patl_3950 b39cb419a58646af25b9aa569e68c68b 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 4 143 4.0E-50 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Patl_3950 b39cb419a58646af25b9aa569e68c68b 145 Gene3D G3DSA:3.50.80.10 1 145 3.8E-52 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Patl_1824 871c588081058d91acc117da6dac9fee 415 SUPERFAMILY SSF103473 3 402 4.97E-40 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_1824 871c588081058d91acc117da6dac9fee 415 Gene3D G3DSA:1.20.1250.20 2 192 6.3E-16 T 11-10-2018 Patl_1824 871c588081058d91acc117da6dac9fee 415 Gene3D G3DSA:1.20.1250.20 204 404 2.3E-30 T 11-10-2018 Patl_1824 871c588081058d91acc117da6dac9fee 415 Pfam PF07690 Major Facilitator Superfamily 11 301 7.9E-16 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_4132 f5d18f7b9edd469d214fed8a0898772d 327 SMART SM01321 12 187 0.0071 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Patl_4132 f5d18f7b9edd469d214fed8a0898772d 327 SUPERFAMILY SSF143422 16 193 3.79E-18 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Patl_0648 cb39238f10ff3fe38d97f301aa6c9ad4 349 PIRSF PIRSF000808 1 341 3.1E-122 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Patl_0648 cb39238f10ff3fe38d97f301aa6c9ad4 349 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 185 346 6.4E-66 T 11-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Patl_0648 cb39238f10ff3fe38d97f301aa6c9ad4 349 Gene3D G3DSA:3.30.428.10 176 348 3.0E-70 T 11-10-2018 IPR036265 HIT-like superfamily Patl_0648 cb39238f10ff3fe38d97f301aa6c9ad4 349 SUPERFAMILY SSF54197 185 345 3.97E-53 T 11-10-2018 IPR036265 HIT-like superfamily Patl_0648 cb39238f10ff3fe38d97f301aa6c9ad4 349 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 346 1.8E-181 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Patl_0648 cb39238f10ff3fe38d97f301aa6c9ad4 349 SUPERFAMILY SSF54197 4 177 4.86E-71 T 11-10-2018 IPR036265 HIT-like superfamily Patl_0648 cb39238f10ff3fe38d97f301aa6c9ad4 349 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 11-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Patl_0648 cb39238f10ff3fe38d97f301aa6c9ad4 349 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 3 176 1.2E-69 T 11-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Patl_0648 cb39238f10ff3fe38d97f301aa6c9ad4 349 Gene3D G3DSA:3.30.428.10 45 175 1.0E-54 T 11-10-2018 IPR036265 HIT-like superfamily Patl_0453 30e4ed9a084aa7bd79d766f718fdc6d9 403 Pfam PF03116 NQR2, RnfD, RnfE family 42 395 7.2E-107 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 Patl_0453 30e4ed9a084aa7bd79d766f718fdc6d9 403 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 398 1.3E-174 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 Patl_0453 30e4ed9a084aa7bd79d766f718fdc6d9 403 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 402 36.167 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 Patl_0453 30e4ed9a084aa7bd79d766f718fdc6d9 403 PIRSF PIRSF016055 1 403 6.7E-197 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 Patl_3693 757f6666b97f88b03a0e1e594b80b38c 658 SUPERFAMILY SSF53822 255 655 4.53E-56 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Patl_3693 757f6666b97f88b03a0e1e594b80b38c 658 Pfam PF04348 LppC putative lipoprotein 368 646 3.9E-44 T 11-10-2018 IPR007443 Penicillin-binding protein activator LpoA Patl_3693 757f6666b97f88b03a0e1e594b80b38c 658 Pfam PF04348 LppC putative lipoprotein 42 356 6.3E-30 T 11-10-2018 IPR007443 Penicillin-binding protein activator LpoA Patl_3693 757f6666b97f88b03a0e1e594b80b38c 658 Gene3D G3DSA:3.40.50.2300 476 643 1.7E-16 T 11-10-2018 Patl_3693 757f6666b97f88b03a0e1e594b80b38c 658 Gene3D G3DSA:1.25.40.650 148 252 3.2E-16 T 11-10-2018 Patl_1174 032e3eee01db89ae546cfe2ed0839879 299 Gene3D G3DSA:3.40.50.150 81 257 3.1E-25 T 11-10-2018 Patl_1174 032e3eee01db89ae546cfe2ed0839879 299 SUPERFAMILY SSF53335 23 259 3.01E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_1174 032e3eee01db89ae546cfe2ed0839879 299 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 93 229 3.5E-22 T 11-10-2018 IPR006342 Methyltransferase FkbM Patl_1174 032e3eee01db89ae546cfe2ed0839879 299 Pfam PF05050 Methyltransferase FkbM domain 96 236 4.7E-10 T 11-10-2018 IPR006342 Methyltransferase FkbM Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 258 284 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 SUPERFAMILY SSF88659 205 288 1.27E-17 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 Pfam PF04545 Sigma-70, region 4 235 285 2.6E-14 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 PRINTS PR00046 Major sigma-70 factor signature 239 251 1.0E-17 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 PRINTS PR00046 Major sigma-70 factor signature 273 284 1.0E-17 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 PRINTS PR00046 Major sigma-70 factor signature 85 98 1.0E-17 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 PRINTS PR00046 Major sigma-70 factor signature 258 273 1.0E-17 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 57 288 1.0E-31 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 SUPERFAMILY SSF88946 20 130 6.54E-40 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 Pfam PF04542 Sigma-70 region 2 61 130 2.3E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 Gene3D G3DSA:1.10.601.10 9 130 5.2E-29 T 11-10-2018 Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 8 289 50.955 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 Gene3D G3DSA:1.20.140.160 137 289 2.1E-15 T 11-10-2018 Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 22 288 3.0E-124 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 85 98 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 Pfam PF00140 Sigma-70 factor, region 1.2 23 54 3.9E-6 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_3948 684cc91bc57219d9ff7e3a9f860a027f 289 PIRSF PIRSF000770 13 289 1.9E-37 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_1934 7e4e2de186bdb8a4edb24935c6f215f9 266 Gene3D G3DSA:3.20.20.70 1 264 4.6E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_1934 7e4e2de186bdb8a4edb24935c6f215f9 266 SUPERFAMILY SSF110399 3 241 1.11E-78 T 11-10-2018 Patl_1934 7e4e2de186bdb8a4edb24935c6f215f9 266 Pfam PF05690 Thiazole biosynthesis protein ThiG 5 250 2.0E-100 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Patl_1934 7e4e2de186bdb8a4edb24935c6f215f9 266 Hamap MF_00443 Thiazole synthase [thiG]. 2 256 40.862 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Patl_3477 18ca9a0d9571f0449419449254b03116 433 SMART SM00283 243 430 6.8E-18 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_3477 18ca9a0d9571f0449419449254b03116 433 SUPERFAMILY SSF55785 149 251 1.66E-20 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3477 18ca9a0d9571f0449419449254b03116 433 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 306 431 1.9E-34 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_3477 18ca9a0d9571f0449419449254b03116 433 SUPERFAMILY SSF55785 30 130 1.29E-20 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3477 18ca9a0d9571f0449419449254b03116 433 Pfam PF13426 PAS domain 34 131 6.0E-12 T 11-10-2018 IPR000014 PAS domain Patl_3477 18ca9a0d9571f0449419449254b03116 433 Pfam PF13426 PAS domain 156 252 1.7E-13 T 11-10-2018 IPR000014 PAS domain Patl_3477 18ca9a0d9571f0449419449254b03116 433 SMART SM00086 92 133 0.014 T 11-10-2018 IPR001610 PAC motif Patl_3477 18ca9a0d9571f0449419449254b03116 433 SMART SM00086 212 254 7.9E-6 T 11-10-2018 IPR001610 PAC motif Patl_3477 18ca9a0d9571f0449419449254b03116 433 Gene3D G3DSA:3.30.450.20 17 152 4.5E-20 T 11-10-2018 Patl_3477 18ca9a0d9571f0449419449254b03116 433 Gene3D G3DSA:1.10.287.950 230 433 2.0E-46 T 11-10-2018 Patl_3477 18ca9a0d9571f0449419449254b03116 433 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 250 279 4.0E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Patl_3477 18ca9a0d9571f0449419449254b03116 433 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 323 350 4.0E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Patl_3477 18ca9a0d9571f0449419449254b03116 433 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 352 381 4.0E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Patl_3477 18ca9a0d9571f0449419449254b03116 433 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 4.0E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Patl_3477 18ca9a0d9571f0449419449254b03116 433 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 31 135 1.2E-13 T 11-10-2018 IPR000014 PAS domain Patl_3477 18ca9a0d9571f0449419449254b03116 433 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 144 258 9.0E-17 T 11-10-2018 IPR000014 PAS domain Patl_3477 18ca9a0d9571f0449419449254b03116 433 SUPERFAMILY SSF58104 238 430 1.7E-47 T 11-10-2018 Patl_3498 343f49f415be3ec81d4682c75c11898a 202 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 196 2.6E-40 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Patl_3498 343f49f415be3ec81d4682c75c11898a 202 Pfam PF01914 MarC family integral membrane protein 2 199 2.4E-46 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Patl_0572 2fc6e60d32cdb251df6f99da9ae5b910 92 SUPERFAMILY SSF55594 6 90 4.84E-26 T 11-10-2018 IPR035895 HPr-like superfamily Patl_0572 2fc6e60d32cdb251df6f99da9ae5b910 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 5 84 1.8E-25 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like Patl_0572 2fc6e60d32cdb251df6f99da9ae5b910 92 Pfam PF00381 PTS HPr component phosphorylation site 6 84 1.3E-24 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like Patl_0572 2fc6e60d32cdb251df6f99da9ae5b910 92 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 16 23 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Patl_0572 2fc6e60d32cdb251df6f99da9ae5b910 92 PRINTS PR00107 Phosphocarrier protein signature 56 73 1.4E-12 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like Patl_0572 2fc6e60d32cdb251df6f99da9ae5b910 92 PRINTS PR00107 Phosphocarrier protein signature 16 32 1.4E-12 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like Patl_0572 2fc6e60d32cdb251df6f99da9ae5b910 92 PRINTS PR00107 Phosphocarrier protein signature 41 56 1.4E-12 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like Patl_0572 2fc6e60d32cdb251df6f99da9ae5b910 92 Gene3D G3DSA:3.30.1340.10 4 85 2.9E-27 T 11-10-2018 IPR035895 HPr-like superfamily Patl_0574 38b2fb97d5402e4a4e0080b6ecddbd53 279 SUPERFAMILY SSF143631 1 273 4.45E-71 T 11-10-2018 IPR003374 ApbE-like superfamily Patl_0574 38b2fb97d5402e4a4e0080b6ecddbd53 279 Pfam PF02424 ApbE family 22 272 1.0E-56 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Patl_0574 38b2fb97d5402e4a4e0080b6ecddbd53 279 PIRSF PIRSF006268 1 279 5.8E-55 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Patl_0574 38b2fb97d5402e4a4e0080b6ecddbd53 279 Gene3D G3DSA:3.10.520.20 2 279 8.7E-67 T 11-10-2018 Patl_2670 e5343da16cdebc96baa345c02439fca6 130 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 50 103 7.4E-14 T 11-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter Patl_2670 e5343da16cdebc96baa345c02439fca6 130 TIGRFAM TIGR02230 ATPase_gene1: putative F0F1-ATPase subunit 15 107 1.3E-36 T 11-10-2018 IPR011744 F0F1-ATPase subunit, putative Patl_1361 35496ae4160455825e13a71d2b7feaf2 517 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 9 510 7.3E-197 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Patl_1361 35496ae4160455825e13a71d2b7feaf2 517 SUPERFAMILY SSF55681 151 508 7.37E-115 T 11-10-2018 Patl_1361 35496ae4160455825e13a71d2b7feaf2 517 Pfam PF00152 tRNA synthetases class II (D, K and N) 151 507 5.5E-83 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1361 35496ae4160455825e13a71d2b7feaf2 517 Gene3D G3DSA:2.40.50.140 1 146 3.5E-29 T 11-10-2018 Patl_1361 35496ae4160455825e13a71d2b7feaf2 517 PRINTS PR00982 Lysyl-tRNA synthetase signature 188 198 3.1E-37 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Patl_1361 35496ae4160455825e13a71d2b7feaf2 517 PRINTS PR00982 Lysyl-tRNA synthetase signature 392 408 3.1E-37 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Patl_1361 35496ae4160455825e13a71d2b7feaf2 517 PRINTS PR00982 Lysyl-tRNA synthetase signature 251 268 3.1E-37 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Patl_1361 35496ae4160455825e13a71d2b7feaf2 517 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 220 3.1E-37 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Patl_1361 35496ae4160455825e13a71d2b7feaf2 517 PRINTS PR00982 Lysyl-tRNA synthetase signature 233 246 3.1E-37 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Patl_1361 35496ae4160455825e13a71d2b7feaf2 517 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 14 510 42.585 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Patl_1361 35496ae4160455825e13a71d2b7feaf2 517 SUPERFAMILY SSF50249 6 144 7.71E-34 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_1361 35496ae4160455825e13a71d2b7feaf2 517 Pfam PF01336 OB-fold nucleic acid binding domain 63 135 3.8E-10 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Patl_1361 35496ae4160455825e13a71d2b7feaf2 517 Gene3D G3DSA:3.30.930.10 147 517 3.7E-131 T 11-10-2018 Patl_0295 b18ec3c634e4d9efa9776d5d165fd9ee 797 Pfam PF07715 TonB-dependent Receptor Plug Domain 117 222 6.4E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0295 b18ec3c634e4d9efa9776d5d165fd9ee 797 Gene3D G3DSA:2.170.130.10 112 230 4.1E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_0295 b18ec3c634e4d9efa9776d5d165fd9ee 797 Gene3D G3DSA:2.60.40.1120 24 101 4.3E-13 T 11-10-2018 Patl_0295 b18ec3c634e4d9efa9776d5d165fd9ee 797 Pfam PF13620 Carboxypeptidase regulatory-like domain 23 98 2.9E-15 T 11-10-2018 Patl_0295 b18ec3c634e4d9efa9776d5d165fd9ee 797 SUPERFAMILY SSF49464 23 103 5.1E-16 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily Patl_0295 b18ec3c634e4d9efa9776d5d165fd9ee 797 SUPERFAMILY SSF56935 104 797 2.38E-93 T 11-10-2018 Patl_0295 b18ec3c634e4d9efa9776d5d165fd9ee 797 Pfam PF00593 TonB dependent receptor 340 794 2.5E-34 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_2319 7b338de68015762bb4f45ab743cda8f3 765 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 158 6.5E-11 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_2319 7b338de68015762bb4f45ab743cda8f3 765 Gene3D G3DSA:2.40.170.20 44 764 2.1E-116 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_2319 7b338de68015762bb4f45ab743cda8f3 765 SUPERFAMILY SSF56935 28 764 2.66E-102 T 11-10-2018 Patl_2319 7b338de68015762bb4f45ab743cda8f3 765 Pfam PF00593 TonB dependent receptor 299 726 9.5E-34 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1894 41386c5c93748864836024c1376abeaa 553 SUPERFAMILY SSF54106 440 485 1.05E-10 T 11-10-2018 Patl_1894 41386c5c93748864836024c1376abeaa 553 Gene3D G3DSA:3.10.350.10 500 550 4.8E-16 T 11-10-2018 IPR036779 LysM domain superfamily Patl_1894 41386c5c93748864836024c1376abeaa 553 SUPERFAMILY SSF53955 134 281 2.95E-41 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Patl_1894 41386c5c93748864836024c1376abeaa 553 SUPERFAMILY SSF54106 502 547 5.89E-11 T 11-10-2018 Patl_1894 41386c5c93748864836024c1376abeaa 553 Gene3D G3DSA:1.10.530.10 130 284 4.8E-31 T 11-10-2018 Patl_1894 41386c5c93748864836024c1376abeaa 553 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 155 183 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Patl_1894 41386c5c93748864836024c1376abeaa 553 Pfam PF01464 Transglycosylase SLT domain 144 249 1.0E-25 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 Patl_1894 41386c5c93748864836024c1376abeaa 553 SUPERFAMILY SSF54106 364 410 6.93E-9 T 11-10-2018 Patl_1894 41386c5c93748864836024c1376abeaa 553 SMART SM00257 503 547 2.5E-13 T 11-10-2018 IPR018392 LysM domain Patl_1894 41386c5c93748864836024c1376abeaa 553 SMART SM00257 441 485 1.3E-12 T 11-10-2018 IPR018392 LysM domain Patl_1894 41386c5c93748864836024c1376abeaa 553 SMART SM00257 366 409 2.0E-8 T 11-10-2018 IPR018392 LysM domain Patl_1894 41386c5c93748864836024c1376abeaa 553 Gene3D G3DSA:3.10.350.10 352 414 4.2E-10 T 11-10-2018 IPR036779 LysM domain superfamily Patl_1894 41386c5c93748864836024c1376abeaa 553 Gene3D G3DSA:3.10.350.10 427 499 6.2E-14 T 11-10-2018 IPR036779 LysM domain superfamily Patl_1894 41386c5c93748864836024c1376abeaa 553 Pfam PF01476 LysM domain 442 484 2.4E-13 T 11-10-2018 IPR018392 LysM domain Patl_1894 41386c5c93748864836024c1376abeaa 553 Pfam PF01476 LysM domain 367 409 3.8E-7 T 11-10-2018 IPR018392 LysM domain Patl_1894 41386c5c93748864836024c1376abeaa 553 Pfam PF01476 LysM domain 504 547 5.8E-14 T 11-10-2018 IPR018392 LysM domain Patl_2216 7efc2dde735fc95d03a547766d12be40 267 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 33.504 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Patl_2216 7efc2dde735fc95d03a547766d12be40 267 Gene3D G3DSA:3.30.360.10 127 234 1.3E-99 T 11-10-2018 Patl_2216 7efc2dde735fc95d03a547766d12be40 267 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Patl_2216 7efc2dde735fc95d03a547766d12be40 267 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 1.4E-41 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Patl_2216 7efc2dde735fc95d03a547766d12be40 267 SUPERFAMILY SSF51735 2 266 3.68E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2216 7efc2dde735fc95d03a547766d12be40 267 SUPERFAMILY SSF55347 127 236 8.5E-35 T 11-10-2018 Patl_2216 7efc2dde735fc95d03a547766d12be40 267 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 3 265 3.7E-93 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Patl_2216 7efc2dde735fc95d03a547766d12be40 267 Gene3D G3DSA:3.40.50.720 3 264 1.3E-99 T 11-10-2018 Patl_2216 7efc2dde735fc95d03a547766d12be40 267 PIRSF PIRSF000161 1 267 3.2E-89 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Patl_2216 7efc2dde735fc95d03a547766d12be40 267 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 125 7.2E-38 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Patl_2049 e7a798b5906b52235111eb8835763b01 205 Gene3D G3DSA:2.30.110.10 13 205 4.8E-50 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Patl_2049 e7a798b5906b52235111eb8835763b01 205 SMART SM00903 23 176 1.5E-13 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Patl_2049 e7a798b5906b52235111eb8835763b01 205 Pfam PF01613 Flavin reductase like domain 27 166 1.5E-18 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Patl_2049 e7a798b5906b52235111eb8835763b01 205 SUPERFAMILY SSF50475 4 191 4.86E-47 T 11-10-2018 Patl_1634 f4e411eb736503d598a4714a475ab6d3 331 SUPERFAMILY SSF55347 149 312 1.52E-80 T 11-10-2018 Patl_1634 f4e411eb736503d598a4714a475ab6d3 331 SUPERFAMILY SSF51735 3 166 5.58E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1634 f4e411eb736503d598a4714a475ab6d3 331 PIRSF PIRSF000149 1 331 5.5E-133 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1634 f4e411eb736503d598a4714a475ab6d3 331 Gene3D G3DSA:3.30.360.10 149 314 3.8E-157 T 11-10-2018 Patl_1634 f4e411eb736503d598a4714a475ab6d3 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.0E-70 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1634 f4e411eb736503d598a4714a475ab6d3 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.2E-39 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1634 f4e411eb736503d598a4714a475ab6d3 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 7.4E-138 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1634 f4e411eb736503d598a4714a475ab6d3 331 SMART SM00846 3 150 1.5E-96 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1634 f4e411eb736503d598a4714a475ab6d3 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 3.5E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1634 f4e411eb736503d598a4714a475ab6d3 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 3.5E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1634 f4e411eb736503d598a4714a475ab6d3 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 3.5E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1634 f4e411eb736503d598a4714a475ab6d3 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 3.5E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1634 f4e411eb736503d598a4714a475ab6d3 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 3.5E-47 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1634 f4e411eb736503d598a4714a475ab6d3 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1634 f4e411eb736503d598a4714a475ab6d3 331 Gene3D G3DSA:3.40.50.720 4 326 3.8E-157 T 11-10-2018 Patl_0564 41d198ece7a8226367ebbf66cfa3c546 184 Pfam PF08282 haloacid dehalogenase-like hydrolase 97 157 3.6E-10 T 11-10-2018 Patl_0564 41d198ece7a8226367ebbf66cfa3c546 184 Gene3D G3DSA:3.40.50.1000 1 184 2.1E-52 T 11-10-2018 IPR023214 HAD superfamily Patl_0564 41d198ece7a8226367ebbf66cfa3c546 184 PIRSF PIRSF006118 9 184 5.6E-63 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Patl_0564 41d198ece7a8226367ebbf66cfa3c546 184 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 22 174 4.4E-47 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Patl_0564 41d198ece7a8226367ebbf66cfa3c546 184 SUPERFAMILY SSF56784 18 178 3.56E-37 T 11-10-2018 IPR036412 HAD-like superfamily Patl_3518 d61662f8039041abfe4b3db9def02f52 484 Gene3D G3DSA:3.90.190.20 320 479 8.4E-51 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Patl_3518 d61662f8039041abfe4b3db9def02f52 484 Gene3D G3DSA:3.40.50.720 18 105 4.2E-32 T 11-10-2018 Patl_3518 d61662f8039041abfe4b3db9def02f52 484 Pfam PF08245 Mur ligase middle domain 122 302 9.1E-30 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Patl_3518 d61662f8039041abfe4b3db9def02f52 484 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 19 468 1.8E-176 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_3518 d61662f8039041abfe4b3db9def02f52 484 SUPERFAMILY SSF53244 321 469 1.41E-47 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Patl_3518 d61662f8039041abfe4b3db9def02f52 484 SUPERFAMILY SSF51984 17 104 8.89E-29 T 11-10-2018 Patl_3518 d61662f8039041abfe4b3db9def02f52 484 SUPERFAMILY SSF53623 103 320 4.58E-70 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Patl_3518 d61662f8039041abfe4b3db9def02f52 484 Pfam PF02875 Mur ligase family, glutamate ligase domain 323 412 1.7E-21 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Patl_3518 d61662f8039041abfe4b3db9def02f52 484 Pfam PF01225 Mur ligase family, catalytic domain 20 116 1.7E-27 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Patl_3518 d61662f8039041abfe4b3db9def02f52 484 Gene3D G3DSA:3.40.1190.10 106 319 3.1E-80 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Patl_3518 d61662f8039041abfe4b3db9def02f52 484 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 17 474 42.608 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_1369 2bf68f2009b0321733f67da912a781df 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 8.2E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_1369 2bf68f2009b0321733f67da912a781df 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 8.2E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_1369 2bf68f2009b0321733f67da912a781df 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 69 4.7E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_1369 2bf68f2009b0321733f67da912a781df 208 SUPERFAMILY SSF48498 99 205 6.53E-18 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Patl_1369 2bf68f2009b0321733f67da912a781df 208 Gene3D G3DSA:1.10.357.10 9 206 3.9E-53 T 11-10-2018 Patl_1369 2bf68f2009b0321733f67da912a781df 208 Pfam PF13305 WHG domain 100 185 7.6E-16 T 11-10-2018 IPR025996 WHG domain Patl_1369 2bf68f2009b0321733f67da912a781df 208 SUPERFAMILY SSF46689 15 85 6.14E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0480 9bf90c623068cd1778d7cfb29fee1fc4 393 SMART SM00267 218 393 2.4E-9 T 11-10-2018 IPR000160 GGDEF domain Patl_0480 9bf90c623068cd1778d7cfb29fee1fc4 393 Gene3D G3DSA:3.30.70.270 236 392 7.7E-28 T 11-10-2018 Patl_0480 9bf90c623068cd1778d7cfb29fee1fc4 393 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 379 6.5E-24 T 11-10-2018 IPR000160 GGDEF domain Patl_0480 9bf90c623068cd1778d7cfb29fee1fc4 393 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 380 3.0E-22 T 11-10-2018 IPR000160 GGDEF domain Patl_0480 9bf90c623068cd1778d7cfb29fee1fc4 393 SUPERFAMILY SSF55073 238 391 3.14E-25 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_2014 4246ea3fcc2da4c034d45bb54aeff836 332 Gene3D G3DSA:3.90.420.10 66 332 1.6E-114 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Patl_2014 4246ea3fcc2da4c034d45bb54aeff836 332 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 3 332 54.618 T 11-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 Patl_2014 4246ea3fcc2da4c034d45bb54aeff836 332 SUPERFAMILY SSF56524 75 328 7.85E-94 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Patl_2014 4246ea3fcc2da4c034d45bb54aeff836 332 Pfam PF00174 Oxidoreductase molybdopterin binding domain 105 266 1.3E-31 T 11-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 Patl_2096 2b3d0c40a07dc73377b6bcece5c47991 212 SMART SM00448 12 127 1.6E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2096 2b3d0c40a07dc73377b6bcece5c47991 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 2.0E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2096 2b3d0c40a07dc73377b6bcece5c47991 212 SUPERFAMILY SSF46894 142 209 1.26E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_2096 2b3d0c40a07dc73377b6bcece5c47991 212 SUPERFAMILY SSF52172 15 162 1.41E-29 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2096 2b3d0c40a07dc73377b6bcece5c47991 212 Pfam PF00072 Response regulator receiver domain 14 127 1.9E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2096 2b3d0c40a07dc73377b6bcece5c47991 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2096 2b3d0c40a07dc73377b6bcece5c47991 212 SMART SM00421 151 208 6.0E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2096 2b3d0c40a07dc73377b6bcece5c47991 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.5E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2096 2b3d0c40a07dc73377b6bcece5c47991 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.5E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2096 2b3d0c40a07dc73377b6bcece5c47991 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.5E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2096 2b3d0c40a07dc73377b6bcece5c47991 212 Gene3D G3DSA:3.40.50.2300 6 143 2.2E-46 T 11-10-2018 Patl_2096 2b3d0c40a07dc73377b6bcece5c47991 212 Gene3D G3DSA:1.10.10.10 145 211 1.5E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1455 3fb8714bba2f5fb74f3fa506f0be49fc 583 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_1455 3fb8714bba2f5fb74f3fa506f0be49fc 583 Pfam PF00005 ABC transporter 358 506 7.5E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1455 3fb8714bba2f5fb74f3fa506f0be49fc 583 SMART SM00382 366 558 1.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1455 3fb8714bba2f5fb74f3fa506f0be49fc 583 Pfam PF00664 ABC transporter transmembrane region 20 280 6.7E-36 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Patl_1455 3fb8714bba2f5fb74f3fa506f0be49fc 583 SUPERFAMILY SSF52540 335 574 4.91E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1455 3fb8714bba2f5fb74f3fa506f0be49fc 583 Gene3D G3DSA:1.20.1560.10 3 321 7.4E-53 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Patl_1455 3fb8714bba2f5fb74f3fa506f0be49fc 583 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 17 547 5.9E-188 T 11-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 Patl_1455 3fb8714bba2f5fb74f3fa506f0be49fc 583 Gene3D G3DSA:3.40.50.300 333 582 1.4E-74 T 11-10-2018 Patl_1455 3fb8714bba2f5fb74f3fa506f0be49fc 583 SUPERFAMILY SSF90123 15 320 3.01E-56 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Patl_4247 993351fcee205137d0de9d8b4b3c0af4 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 127 138 4.7E-13 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Patl_4247 993351fcee205137d0de9d8b4b3c0af4 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 155 167 4.7E-13 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Patl_4247 993351fcee205137d0de9d8b4b3c0af4 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 116 126 4.7E-13 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Patl_4247 993351fcee205137d0de9d8b4b3c0af4 207 Pfam PF01726 LexA DNA binding domain 1 65 1.1E-28 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 Patl_4247 993351fcee205137d0de9d8b4b3c0af4 207 SUPERFAMILY SSF46785 3 70 5.45E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_4247 993351fcee205137d0de9d8b4b3c0af4 207 Hamap MF_00015 LexA repressor [lexA]. 3 204 31.528 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Patl_4247 993351fcee205137d0de9d8b4b3c0af4 207 Pfam PF00717 Peptidase S24-like 119 185 4.1E-16 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Patl_4247 993351fcee205137d0de9d8b4b3c0af4 207 TIGRFAM TIGR00498 lexA: repressor LexA 1 204 8.8E-79 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Patl_4247 993351fcee205137d0de9d8b4b3c0af4 207 SUPERFAMILY SSF51306 81 203 1.44E-35 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Patl_4247 993351fcee205137d0de9d8b4b3c0af4 207 Gene3D G3DSA:1.10.10.10 1 70 4.8E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_4247 993351fcee205137d0de9d8b4b3c0af4 207 Gene3D G3DSA:2.10.109.10 85 207 7.1E-45 T 11-10-2018 Patl_0499 8bb1948f2d5e83880d5b7079f43e70c3 353 Gene3D G3DSA:3.40.390.10 34 246 1.1E-28 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Patl_0499 8bb1948f2d5e83880d5b7079f43e70c3 353 SUPERFAMILY SSF55486 35 247 8.35E-30 T 11-10-2018 Patl_0499 8bb1948f2d5e83880d5b7079f43e70c3 353 Pfam PF01400 Astacin (Peptidase family M12A) 40 214 2.0E-7 T 11-10-2018 IPR001506 Peptidase M12A GO:0004222|GO:0006508 Patl_0499 8bb1948f2d5e83880d5b7079f43e70c3 353 SMART SM00235 37 187 6.2E-6 T 11-10-2018 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 Patl_0337 83388fbaa77637e65ff19c097e0539b8 401 SUPERFAMILY SSF53067 122 397 2.18E-27 T 11-10-2018 Patl_0337 83388fbaa77637e65ff19c097e0539b8 401 Pfam PF00480 ROK family 122 274 2.0E-19 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Patl_0337 83388fbaa77637e65ff19c097e0539b8 401 Gene3D G3DSA:3.30.420.40 236 361 1.5E-33 T 11-10-2018 Patl_0337 83388fbaa77637e65ff19c097e0539b8 401 Gene3D G3DSA:3.30.420.40 113 235 1.5E-33 T 11-10-2018 Patl_0337 83388fbaa77637e65ff19c097e0539b8 401 SUPERFAMILY SSF46785 42 108 3.81E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3836 4b5008bd4c2bcd68305a936ebed43a9e 338 SUPERFAMILY SSF103039 144 333 1.57E-41 T 11-10-2018 IPR028976 CheC-like superfamily Patl_3836 4b5008bd4c2bcd68305a936ebed43a9e 338 Gene3D G3DSA:3.40.1550.10 142 336 8.8E-38 T 11-10-2018 IPR028976 CheC-like superfamily Patl_3836 4b5008bd4c2bcd68305a936ebed43a9e 338 Gene3D G3DSA:3.40.50.2300 2 124 4.3E-27 T 11-10-2018 Patl_3836 4b5008bd4c2bcd68305a936ebed43a9e 338 SUPERFAMILY SSF52172 3 118 1.71E-28 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3836 4b5008bd4c2bcd68305a936ebed43a9e 338 SMART SM00448 3 115 1.7E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3836 4b5008bd4c2bcd68305a936ebed43a9e 338 Pfam PF00072 Response regulator receiver domain 5 115 1.0E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2120 c0e7a0ca45cf214c1bf1784f79a7d742 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 1.2E-38 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Patl_2120 c0e7a0ca45cf214c1bf1784f79a7d742 412 SMART SM00825 Beta-ketoacyl synthase 6 412 6.4E-13 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Patl_2120 c0e7a0ca45cf214c1bf1784f79a7d742 412 Gene3D G3DSA:3.40.47.10 257 401 1.4E-52 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_2120 c0e7a0ca45cf214c1bf1784f79a7d742 412 Gene3D G3DSA:3.40.47.10 1 255 1.7E-91 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_2120 c0e7a0ca45cf214c1bf1784f79a7d742 412 PIRSF PIRSF000447 1 412 6.2E-194 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Patl_2120 c0e7a0ca45cf214c1bf1784f79a7d742 412 SUPERFAMILY SSF53901 3 252 6.05E-76 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_2120 c0e7a0ca45cf214c1bf1784f79a7d742 412 SUPERFAMILY SSF53901 215 411 8.11E-71 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_2120 c0e7a0ca45cf214c1bf1784f79a7d742 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 3.7E-196 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Patl_2120 c0e7a0ca45cf214c1bf1784f79a7d742 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site Patl_2120 c0e7a0ca45cf214c1bf1784f79a7d742 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 6.5E-60 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Patl_2257 efb9fb93ab5e998a125735a68f9b6baf 1110 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 956 990 - T 11-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 Patl_2257 efb9fb93ab5e998a125735a68f9b6baf 1110 Pfam PF12795 Mechanosensitive ion channel porin domain 46 258 4.4E-9 T 11-10-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain Patl_2257 efb9fb93ab5e998a125735a68f9b6baf 1110 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 495 824 6.8E-83 T 11-10-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 Patl_2257 efb9fb93ab5e998a125735a68f9b6baf 1110 SUPERFAMILY SSF82689 994 1092 6.41E-28 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Patl_2257 efb9fb93ab5e998a125735a68f9b6baf 1110 Gene3D G3DSA:2.30.30.60 942 991 3.2E-12 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Patl_2257 efb9fb93ab5e998a125735a68f9b6baf 1110 SUPERFAMILY SSF50182 927 992 7.52E-17 T 11-10-2018 IPR010920 LSM domain superfamily Patl_2257 efb9fb93ab5e998a125735a68f9b6baf 1110 Pfam PF00924 Mechanosensitive ion channel 884 1083 3.3E-56 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Patl_2257 efb9fb93ab5e998a125735a68f9b6baf 1110 Gene3D G3DSA:3.30.70.100 994 1087 5.6E-22 T 11-10-2018 Patl_2257 efb9fb93ab5e998a125735a68f9b6baf 1110 SUPERFAMILY SSF82861 840 925 2.35E-8 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Patl_1756 b58b1131bc0fec7a637a687671d888c6 1166 Gene3D G3DSA:3.40.50.10930 5 306 1.0E-104 T 11-10-2018 Patl_1756 b58b1131bc0fec7a637a687671d888c6 1166 Gene3D G3DSA:3.40.50.300 326 796 2.0E-166 T 11-10-2018 Patl_1756 b58b1131bc0fec7a637a687671d888c6 1166 SUPERFAMILY SSF52980 843 1162 2.14E-66 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Patl_1756 b58b1131bc0fec7a637a687671d888c6 1166 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1130 1.5E-298 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Patl_1756 b58b1131bc0fec7a637a687671d888c6 1166 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 796 2.0E-272 T 11-10-2018 Patl_1756 b58b1131bc0fec7a637a687671d888c6 1166 Gene3D G3DSA:1.10.486.10 452 661 2.0E-166 T 11-10-2018 Patl_1756 b58b1131bc0fec7a637a687671d888c6 1166 Gene3D G3DSA:1.10.10.990 885 949 1.9E-7 T 11-10-2018 Patl_1756 b58b1131bc0fec7a637a687671d888c6 1166 SUPERFAMILY SSF52540 354 794 4.89E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1756 b58b1131bc0fec7a637a687671d888c6 1166 Gene3D G3DSA:1.10.10.160 81 190 1.0E-104 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily Patl_1756 b58b1131bc0fec7a637a687671d888c6 1166 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1165 18.687 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Patl_1756 b58b1131bc0fec7a637a687671d888c6 1166 SUPERFAMILY SSF52540 1 337 1.14E-100 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1756 b58b1131bc0fec7a637a687671d888c6 1166 PIRSF PIRSF000980 1 1166 0.0 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 Patl_3997 4b3fee91dadb8a4bfa846f6ba433e8a5 246 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 8 240 2.8E-23 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Patl_3997 4b3fee91dadb8a4bfa846f6ba433e8a5 246 Gene3D G3DSA:3.30.420.490 121 236 1.0E-51 T 11-10-2018 Patl_3997 4b3fee91dadb8a4bfa846f6ba433e8a5 246 SUPERFAMILY SSF53067 120 243 2.37E-26 T 11-10-2018 Patl_3997 4b3fee91dadb8a4bfa846f6ba433e8a5 246 Pfam PF03309 Type III pantothenate kinase 8 197 4.1E-36 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Patl_3997 4b3fee91dadb8a4bfa846f6ba433e8a5 246 Hamap MF_01274 Type III pantothenate kinase [coaX]. 6 246 13.836 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Patl_3997 4b3fee91dadb8a4bfa846f6ba433e8a5 246 SUPERFAMILY SSF53067 8 115 4.73E-18 T 11-10-2018 Patl_3997 4b3fee91dadb8a4bfa846f6ba433e8a5 246 Gene3D G3DSA:3.30.420.40 8 240 1.0E-51 T 11-10-2018 Patl_1406 ec5ed4b39d0799112f9ac3e7a3ac186c 256 Gene3D G3DSA:3.40.50.720 1 251 4.4E-77 T 11-10-2018 Patl_1406 ec5ed4b39d0799112f9ac3e7a3ac186c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1406 ec5ed4b39d0799112f9ac3e7a3ac186c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1406 ec5ed4b39d0799112f9ac3e7a3ac186c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1406 ec5ed4b39d0799112f9ac3e7a3ac186c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1406 ec5ed4b39d0799112f9ac3e7a3ac186c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1406 ec5ed4b39d0799112f9ac3e7a3ac186c 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.1E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1406 ec5ed4b39d0799112f9ac3e7a3ac186c 256 Pfam PF00106 short chain dehydrogenase 10 204 1.1E-51 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1406 ec5ed4b39d0799112f9ac3e7a3ac186c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 5.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1406 ec5ed4b39d0799112f9ac3e7a3ac186c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 5.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1406 ec5ed4b39d0799112f9ac3e7a3ac186c 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 5.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1406 ec5ed4b39d0799112f9ac3e7a3ac186c 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_1406 ec5ed4b39d0799112f9ac3e7a3ac186c 256 SUPERFAMILY SSF51735 9 252 1.12E-70 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2872 d39a5349599467ec1ff549d658c374b5 239 Gene3D G3DSA:1.10.357.10 2 199 8.0E-24 T 11-10-2018 Patl_2872 d39a5349599467ec1ff549d658c374b5 239 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 7.1E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_2872 d39a5349599467ec1ff549d658c374b5 239 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 7.1E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_2872 d39a5349599467ec1ff549d658c374b5 239 SUPERFAMILY SSF46689 8 86 8.21E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_2872 d39a5349599467ec1ff549d658c374b5 239 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.9E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_1981 a71f673c6852fd6006e7119b0f02d206 213 SUPERFAMILY SSF52172 4 160 2.42E-24 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1981 a71f673c6852fd6006e7119b0f02d206 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_1981 a71f673c6852fd6006e7119b0f02d206 213 Gene3D G3DSA:3.40.50.2300 3 128 8.3E-24 T 11-10-2018 Patl_1981 a71f673c6852fd6006e7119b0f02d206 213 Gene3D G3DSA:1.10.10.10 129 209 6.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1981 a71f673c6852fd6006e7119b0f02d206 213 Pfam PF00072 Response regulator receiver domain 6 116 4.1E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1981 a71f673c6852fd6006e7119b0f02d206 213 SUPERFAMILY SSF46894 144 208 8.84E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_1981 a71f673c6852fd6006e7119b0f02d206 213 SMART SM00448 3 116 4.2E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1981 a71f673c6852fd6006e7119b0f02d206 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 202 3.2E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_1981 a71f673c6852fd6006e7119b0f02d206 213 SMART SM00421 149 206 3.0E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_1981 a71f673c6852fd6006e7119b0f02d206 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.3E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_1981 a71f673c6852fd6006e7119b0f02d206 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.3E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_1981 a71f673c6852fd6006e7119b0f02d206 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.3E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_3523 e91668bd441ddeebce5834a51cc3128f 471 SUPERFAMILY SSF63418 3 100 8.76E-23 T 11-10-2018 IPR035911 MurE/MurF, N-terminal Patl_3523 e91668bd441ddeebce5834a51cc3128f 471 SUPERFAMILY SSF53244 319 454 1.1E-35 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Patl_3523 e91668bd441ddeebce5834a51cc3128f 471 Gene3D G3DSA:3.40.1190.10 87 316 4.8E-73 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Patl_3523 e91668bd441ddeebce5834a51cc3128f 471 Pfam PF01225 Mur ligase family, catalytic domain 30 78 2.1E-8 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Patl_3523 e91668bd441ddeebce5834a51cc3128f 471 SUPERFAMILY SSF53623 107 314 4.32E-54 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Patl_3523 e91668bd441ddeebce5834a51cc3128f 471 Gene3D G3DSA:3.40.1390.10 1 86 2.5E-23 T 11-10-2018 Patl_3523 e91668bd441ddeebce5834a51cc3128f 471 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 398 1.9E-15 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Patl_3523 e91668bd441ddeebce5834a51cc3128f 471 Gene3D G3DSA:3.90.190.20 318 458 8.4E-43 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Patl_3523 e91668bd441ddeebce5834a51cc3128f 471 Pfam PF08245 Mur ligase middle domain 111 299 8.9E-47 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Patl_3523 e91668bd441ddeebce5834a51cc3128f 471 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 455 34.278 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_3523 e91668bd441ddeebce5834a51cc3128f 471 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 35 454 7.2E-142 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_3373 94997865e7d857b1456c0c5263b83514 666 Pfam PF00990 Diguanylate cyclase, GGDEF domain 251 404 1.6E-40 T 11-10-2018 IPR000160 GGDEF domain Patl_3373 94997865e7d857b1456c0c5263b83514 666 SMART SM00267 240 408 6.6E-53 T 11-10-2018 IPR000160 GGDEF domain Patl_3373 94997865e7d857b1456c0c5263b83514 666 SUPERFAMILY SSF141868 426 663 1.7E-63 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3373 94997865e7d857b1456c0c5263b83514 666 SUPERFAMILY SSF55073 256 409 1.41E-44 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3373 94997865e7d857b1456c0c5263b83514 666 Pfam PF00563 EAL domain 427 662 2.6E-56 T 11-10-2018 IPR001633 EAL domain Patl_3373 94997865e7d857b1456c0c5263b83514 666 SMART SM00052 420 665 1.6E-50 T 11-10-2018 IPR001633 EAL domain Patl_3373 94997865e7d857b1456c0c5263b83514 666 Gene3D G3DSA:3.20.20.450 410 666 1.9E-72 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3373 94997865e7d857b1456c0c5263b83514 666 Gene3D G3DSA:3.30.70.270 244 409 6.5E-50 T 11-10-2018 Patl_3373 94997865e7d857b1456c0c5263b83514 666 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 249 407 2.0E-43 T 11-10-2018 IPR000160 GGDEF domain Patl_0227 1e5bc6226d1941856115c0a90626928a 297 PIRSF PIRSF005261 1 287 3.5E-72 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Patl_0227 1e5bc6226d1941856115c0a90626928a 297 SUPERFAMILY SSF64397 4 236 2.75E-67 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Patl_0227 1e5bc6226d1941856115c0a90626928a 297 Gene3D G3DSA:3.90.1280.10 230 287 1.2E-19 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Patl_0227 1e5bc6226d1941856115c0a90626928a 297 Gene3D G3DSA:3.55.30.10 1 176 1.4E-59 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 Patl_0227 1e5bc6226d1941856115c0a90626928a 297 SUPERFAMILY SSF118352 230 286 8.11E-17 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 Patl_0227 1e5bc6226d1941856115c0a90626928a 297 Gene3D G3DSA:1.10.287.480 181 229 3.3E-21 T 11-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily Patl_0227 1e5bc6226d1941856115c0a90626928a 297 Pfam PF01430 Hsp33 protein 4 277 7.2E-80 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Patl_0227 1e5bc6226d1941856115c0a90626928a 297 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 288 28.85 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 Patl_2687 501519af715c09464e00cac5bbbaf39d 301 Pfam PF01261 Xylose isomerase-like TIM barrel 109 252 7.2E-19 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Patl_2687 501519af715c09464e00cac5bbbaf39d 301 SUPERFAMILY SSF51658 50 287 4.42E-58 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily Patl_2687 501519af715c09464e00cac5bbbaf39d 301 PIRSF PIRSF006241 44 297 2.5E-38 T 11-10-2018 IPR026040 Hydroxypyruvate isomerase-like Patl_2687 501519af715c09464e00cac5bbbaf39d 301 Gene3D G3DSA:3.20.20.150 43 295 2.2E-48 T 11-10-2018 Patl_1588 f415f74906375e94e9ec4b0ca3d6e44d 375 Pfam PF01817 Chorismate mutase type II 9 86 5.5E-20 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Patl_1588 f415f74906375e94e9ec4b0ca3d6e44d 375 Gene3D G3DSA:1.10.3660.10 247 372 3.4E-42 T 11-10-2018 Patl_1588 f415f74906375e94e9ec4b0ca3d6e44d 375 Gene3D G3DSA:1.20.59.10 2 80 5.3E-17 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Patl_1588 f415f74906375e94e9ec4b0ca3d6e44d 375 SUPERFAMILY SSF51735 91 236 2.56E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1588 f415f74906375e94e9ec4b0ca3d6e44d 375 SUPERFAMILY SSF48600 4 89 2.75E-23 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Patl_1588 f415f74906375e94e9ec4b0ca3d6e44d 375 Gene3D G3DSA:3.40.50.720 81 245 1.2E-40 T 11-10-2018 Patl_1588 f415f74906375e94e9ec4b0ca3d6e44d 375 SUPERFAMILY SSF48179 240 363 5.33E-36 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_1588 f415f74906375e94e9ec4b0ca3d6e44d 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 86 5.6E-30 T 11-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 Patl_1588 f415f74906375e94e9ec4b0ca3d6e44d 375 SMART SM00830 9 89 2.8E-31 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Patl_1588 f415f74906375e94e9ec4b0ca3d6e44d 375 Pfam PF02153 Prephenate dehydrogenase 139 342 5.6E-29 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 Patl_1588 f415f74906375e94e9ec4b0ca3d6e44d 375 PIRSF PIRSF001499 1 373 2.5E-142 T 11-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 Patl_0610 1b457b5be154e6d4cd195fa6dbb1e705 542 Pfam PF00999 Sodium/hydrogen exchanger family 16 357 2.7E-43 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Patl_0610 1b457b5be154e6d4cd195fa6dbb1e705 542 Gene3D G3DSA:3.40.50.720 393 534 3.1E-29 T 11-10-2018 Patl_0610 1b457b5be154e6d4cd195fa6dbb1e705 542 Gene3D G3DSA:1.20.1530.20 12 372 5.0E-47 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Patl_0610 1b457b5be154e6d4cd195fa6dbb1e705 542 SUPERFAMILY SSF51735 399 524 8.97E-18 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0610 1b457b5be154e6d4cd195fa6dbb1e705 542 Pfam PF02254 TrkA-N domain 399 514 8.5E-18 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Patl_2881 12d26ca814136eaed71f81d2b47b7f1f 438 SUPERFAMILY SSF53720 6 427 5.69E-83 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_2881 12d26ca814136eaed71f81d2b47b7f1f 438 Gene3D G3DSA:3.40.50.1980 233 348 1.3E-118 T 11-10-2018 Patl_2881 12d26ca814136eaed71f81d2b47b7f1f 438 Pfam PF00815 Histidinol dehydrogenase 22 426 5.8E-164 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Patl_2881 12d26ca814136eaed71f81d2b47b7f1f 438 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 426 39.242 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Patl_2881 12d26ca814136eaed71f81d2b47b7f1f 438 PRINTS PR00083 Histidinol dehydrogenase signature 360 378 9.1E-97 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Patl_2881 12d26ca814136eaed71f81d2b47b7f1f 438 PRINTS PR00083 Histidinol dehydrogenase signature 31 55 9.1E-97 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Patl_2881 12d26ca814136eaed71f81d2b47b7f1f 438 PRINTS PR00083 Histidinol dehydrogenase signature 251 270 9.1E-97 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Patl_2881 12d26ca814136eaed71f81d2b47b7f1f 438 PRINTS PR00083 Histidinol dehydrogenase signature 319 344 9.1E-97 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Patl_2881 12d26ca814136eaed71f81d2b47b7f1f 438 PRINTS PR00083 Histidinol dehydrogenase signature 104 131 9.1E-97 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Patl_2881 12d26ca814136eaed71f81d2b47b7f1f 438 PRINTS PR00083 Histidinol dehydrogenase signature 167 193 9.1E-97 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Patl_2881 12d26ca814136eaed71f81d2b47b7f1f 438 PRINTS PR00083 Histidinol dehydrogenase signature 197 222 9.1E-97 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Patl_2881 12d26ca814136eaed71f81d2b47b7f1f 438 PRINTS PR00083 Histidinol dehydrogenase signature 229 250 9.1E-97 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Patl_2881 12d26ca814136eaed71f81d2b47b7f1f 438 Gene3D G3DSA:3.40.50.1980 29 231 1.3E-118 T 11-10-2018 Patl_2881 12d26ca814136eaed71f81d2b47b7f1f 438 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 31 425 8.1E-160 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Patl_2881 12d26ca814136eaed71f81d2b47b7f1f 438 PIRSF PIRSF000099 1 429 1.3E-159 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Patl_2881 12d26ca814136eaed71f81d2b47b7f1f 438 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 229 261 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 Patl_1397 62d5e2688c249cbad247abe4974e035a 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 2.9E-14 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Patl_1397 62d5e2688c249cbad247abe4974e035a 64 Gene3D G3DSA:1.10.10.1100 1 57 9.6E-23 T 11-10-2018 Patl_2594 61b39e04b2a95fa3c98357756310a742 812 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 427 438 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Patl_2594 61b39e04b2a95fa3c98357756310a742 812 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 494 800 3.5E-58 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Patl_2594 61b39e04b2a95fa3c98357756310a742 812 Gene3D G3DSA:3.30.1490.20 4 196 8.8E-66 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Patl_2594 61b39e04b2a95fa3c98357756310a742 812 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 707 725 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Patl_2594 61b39e04b2a95fa3c98357756310a742 812 SUPERFAMILY SSF52009 360 478 7.19E-32 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Patl_2594 61b39e04b2a95fa3c98357756310a742 812 SUPERFAMILY SSF56059 4 398 1.53E-96 T 11-10-2018 Patl_2594 61b39e04b2a95fa3c98357756310a742 812 Gene3D G3DSA:3.20.20.60 492 800 5.7E-97 T 11-10-2018 Patl_2594 61b39e04b2a95fa3c98357756310a742 812 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 7 803 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Patl_2594 61b39e04b2a95fa3c98357756310a742 812 SUPERFAMILY SSF51621 475 807 2.34E-93 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Patl_2594 61b39e04b2a95fa3c98357756310a742 812 Gene3D G3DSA:3.50.30.10 370 480 2.3E-37 T 11-10-2018 Patl_2594 61b39e04b2a95fa3c98357756310a742 812 Pfam PF00391 PEP-utilising enzyme, mobile domain 397 468 8.0E-25 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Patl_2594 61b39e04b2a95fa3c98357756310a742 812 PIRSF PIRSF000854 2 807 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Patl_2594 61b39e04b2a95fa3c98357756310a742 812 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 20 355 4.4E-104 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Patl_2594 61b39e04b2a95fa3c98357756310a742 812 Gene3D G3DSA:3.30.470.20 197 369 1.3E-49 T 11-10-2018 Patl_0310 253d8ee9239f89915230aa3424f5c7ce 348 Gene3D G3DSA:1.10.10.10 292 338 1.9E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0310 253d8ee9239f89915230aa3424f5c7ce 348 SUPERFAMILY SSF56281 9 340 1.11E-65 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_0310 253d8ee9239f89915230aa3424f5c7ce 348 Gene3D G3DSA:3.60.15.10 16 286 9.3E-55 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_0310 253d8ee9239f89915230aa3424f5c7ce 348 Pfam PF00753 Metallo-beta-lactamase superfamily 35 259 1.3E-23 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_0310 253d8ee9239f89915230aa3424f5c7ce 348 SMART SM00849 36 259 5.0E-23 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_2188 b183d6bb50beb1861d846adbf9deef7f 362 Pfam PF00990 Diguanylate cyclase, GGDEF domain 210 356 3.6E-41 T 11-10-2018 IPR000160 GGDEF domain Patl_2188 b183d6bb50beb1861d846adbf9deef7f 362 Pfam PF11563 Protoglobin 37 169 5.0E-7 T 11-10-2018 Patl_2188 b183d6bb50beb1861d846adbf9deef7f 362 SUPERFAMILY SSF55073 213 358 3.84E-41 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_2188 b183d6bb50beb1861d846adbf9deef7f 362 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 207 356 8.0E-40 T 11-10-2018 IPR000160 GGDEF domain Patl_2188 b183d6bb50beb1861d846adbf9deef7f 362 Gene3D G3DSA:1.10.490.10 22 169 5.4E-7 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Patl_2188 b183d6bb50beb1861d846adbf9deef7f 362 Gene3D G3DSA:3.30.70.270 194 361 1.5E-45 T 11-10-2018 Patl_2188 b183d6bb50beb1861d846adbf9deef7f 362 SMART SM00267 197 358 5.3E-46 T 11-10-2018 IPR000160 GGDEF domain Patl_0817 ca009c403e59a0c90c3329884923b832 465 Gene3D G3DSA:3.80.10.10 319 443 9.0E-8 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily Patl_0817 ca009c403e59a0c90c3329884923b832 465 Gene3D G3DSA:1.10.760.10 171 257 2.4E-5 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_0817 ca009c403e59a0c90c3329884923b832 465 SUPERFAMILY SSF52047 320 422 1.96E-7 T 11-10-2018 Patl_0817 ca009c403e59a0c90c3329884923b832 465 SUPERFAMILY SSF46626 168 255 2.77E-6 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_0817 ca009c403e59a0c90c3329884923b832 465 Pfam PF07635 Planctomycete cytochrome C 178 235 8.8E-15 T 11-10-2018 IPR011429 Cytochrome C, Planctomycete-type Patl_0250 3391d73772d648572724cff9b119ca9a 368 Gene3D G3DSA:2.40.160.20 17 162 8.3E-16 T 11-10-2018 Patl_0250 3391d73772d648572724cff9b119ca9a 368 Pfam PF00691 OmpA family 256 352 1.5E-17 T 11-10-2018 IPR006665 OmpA-like domain Patl_0250 3391d73772d648572724cff9b119ca9a 368 SUPERFAMILY SSF103647 175 248 1.57E-15 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 Patl_0250 3391d73772d648572724cff9b119ca9a 368 Pfam PF02412 Thrombospondin type 3 repeat 177 194 6.7E-4 T 11-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 Patl_0250 3391d73772d648572724cff9b119ca9a 368 Pfam PF02412 Thrombospondin type 3 repeat 212 235 5.2E-4 T 11-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 Patl_0250 3391d73772d648572724cff9b119ca9a 368 SUPERFAMILY SSF56925 29 170 1.02E-9 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Patl_0250 3391d73772d648572724cff9b119ca9a 368 Gene3D G3DSA:4.10.1080.10 163 250 1.3E-9 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 Patl_0250 3391d73772d648572724cff9b119ca9a 368 SUPERFAMILY SSF103088 228 357 2.22E-24 T 11-10-2018 IPR036737 OmpA-like domain superfamily Patl_0250 3391d73772d648572724cff9b119ca9a 368 Gene3D G3DSA:3.30.1330.60 251 365 1.3E-23 T 11-10-2018 IPR036737 OmpA-like domain superfamily Patl_2943 dd59367b97fe17e6d53351bc6d4ae314 140 Pfam PF03061 Thioesterase superfamily 24 106 2.3E-13 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Patl_2943 dd59367b97fe17e6d53351bc6d4ae314 140 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 10 133 5.0E-47 T 11-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 Patl_2943 dd59367b97fe17e6d53351bc6d4ae314 140 PIRSF PIRSF003230 2 140 7.8E-44 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Patl_2943 dd59367b97fe17e6d53351bc6d4ae314 140 SUPERFAMILY SSF54637 9 137 1.56E-38 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_2943 dd59367b97fe17e6d53351bc6d4ae314 140 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 14 129 7.6E-35 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Patl_2943 dd59367b97fe17e6d53351bc6d4ae314 140 Gene3D G3DSA:3.10.129.10 6 139 1.0E-41 T 11-10-2018 Patl_2765 c002327f7adc4de85502a4c0ad188114 467 Gene3D G3DSA:3.30.499.20 4 287 1.3E-85 T 11-10-2018 Patl_2765 c002327f7adc4de85502a4c0ad188114 467 ProSitePatterns PS00450 Aconitase family signature 1. 340 356 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Patl_2765 c002327f7adc4de85502a4c0ad188114 467 PRINTS PR00415 Aconitase family signature 109 117 1.4E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_2765 c002327f7adc4de85502a4c0ad188114 467 PRINTS PR00415 Aconitase family signature 134 149 1.4E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_2765 c002327f7adc4de85502a4c0ad188114 467 PRINTS PR00415 Aconitase family signature 120 133 1.4E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_2765 c002327f7adc4de85502a4c0ad188114 467 PRINTS PR00415 Aconitase family signature 196 209 1.4E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_2765 c002327f7adc4de85502a4c0ad188114 467 PRINTS PR00415 Aconitase family signature 344 355 1.4E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_2765 c002327f7adc4de85502a4c0ad188114 467 PRINTS PR00415 Aconitase family signature 210 223 1.4E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_2765 c002327f7adc4de85502a4c0ad188114 467 PRINTS PR00415 Aconitase family signature 287 301 1.4E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_2765 c002327f7adc4de85502a4c0ad188114 467 PRINTS PR00415 Aconitase family signature 400 413 1.4E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_2765 c002327f7adc4de85502a4c0ad188114 467 SUPERFAMILY SSF53732 1 466 1.16E-149 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Patl_2765 c002327f7adc4de85502a4c0ad188114 467 Pfam PF00330 Aconitase family (aconitate hydratase) 7 458 3.1E-141 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_2765 c002327f7adc4de85502a4c0ad188114 467 Gene3D G3DSA:3.30.499.10 324 467 4.3E-47 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Patl_2765 c002327f7adc4de85502a4c0ad188114 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 1.8E-172 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Patl_3430 245c466f32bdba8fbb0a75aadda5753a 181 SUPERFAMILY SSF52317 8 179 2.22E-49 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_3430 245c466f32bdba8fbb0a75aadda5753a 181 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 179 3.0E-53 T 11-10-2018 IPR006286 Deglycase PfpI Patl_3430 245c466f32bdba8fbb0a75aadda5753a 181 Pfam PF01965 DJ-1/PfpI family 8 177 2.4E-52 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Patl_3430 245c466f32bdba8fbb0a75aadda5753a 181 Gene3D G3DSA:3.40.50.880 2 181 3.8E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_3012 c00c95770ed57a0984ef64ff52393333 596 SUPERFAMILY SSF51569 1 300 5.68E-87 T 11-10-2018 Patl_3012 c00c95770ed57a0984ef64ff52393333 596 SUPERFAMILY SSF51230 524 595 3.27E-20 T 11-10-2018 IPR011053 Single hybrid motif Patl_3012 c00c95770ed57a0984ef64ff52393333 596 Gene3D G3DSA:3.20.20.70 1 465 1.6E-165 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_3012 c00c95770ed57a0984ef64ff52393333 596 SUPERFAMILY SSF89000 297 462 2.55E-49 T 11-10-2018 Patl_3012 c00c95770ed57a0984ef64ff52393333 596 Pfam PF00682 HMGL-like 6 270 5.4E-52 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Patl_3012 c00c95770ed57a0984ef64ff52393333 596 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 552 569 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Patl_3012 c00c95770ed57a0984ef64ff52393333 596 Gene3D G3DSA:2.40.50.100 521 596 4.1E-22 T 11-10-2018 Patl_3012 c00c95770ed57a0984ef64ff52393333 596 Pfam PF02436 Conserved carboxylase domain 292 494 2.1E-56 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Patl_3012 c00c95770ed57a0984ef64ff52393333 596 Pfam PF00364 Biotin-requiring enzyme 530 595 7.5E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Patl_3012 c00c95770ed57a0984ef64ff52393333 596 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 591 1.0E-265 T 11-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 Patl_4289 91291e298a6e2b9ac1f28cf4b082b7e2 492 Pfam PF04820 Tryptophan halogenase 8 459 1.5E-187 T 11-10-2018 IPR006905 Flavin-dependent halogenase Patl_4289 91291e298a6e2b9ac1f28cf4b082b7e2 492 SUPERFAMILY SSF51905 7 417 1.11E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_4289 91291e298a6e2b9ac1f28cf4b082b7e2 492 Gene3D G3DSA:3.50.50.60 1 491 2.4E-189 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_4289 91291e298a6e2b9ac1f28cf4b082b7e2 492 PIRSF PIRSF011396 1 492 1.4E-196 T 11-10-2018 IPR033856 Flavin-dependent tryptophan halogenase Patl_3714 2add5dc6ca7515a419058cd0aedffaa3 301 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 91 2.6E-19 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Patl_3714 2add5dc6ca7515a419058cd0aedffaa3 301 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 9 301 56.732 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Patl_3714 2add5dc6ca7515a419058cd0aedffaa3 301 Pfam PF00589 Phage integrase family 117 286 1.3E-54 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Patl_3714 2add5dc6ca7515a419058cd0aedffaa3 301 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 12 300 1.2E-117 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Patl_3714 2add5dc6ca7515a419058cd0aedffaa3 301 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 7 301 59.365 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Patl_3714 2add5dc6ca7515a419058cd0aedffaa3 301 Gene3D G3DSA:1.10.443.10 115 294 1.2E-68 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Patl_3714 2add5dc6ca7515a419058cd0aedffaa3 301 SUPERFAMILY SSF56349 9 292 2.3E-58 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Patl_3714 2add5dc6ca7515a419058cd0aedffaa3 301 Gene3D G3DSA:1.10.150.130 2 113 2.0E-22 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 479 493 - T 11-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 SUPERFAMILY SSF49785 32 244 1.02E-64 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 SUPERFAMILY SSF49303 673 782 1.15E-27 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 SUPERFAMILY SSF49303 245 366 1.22E-21 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 PRINTS PR00132 Glycosyl hydrolase family 2 signature 378 392 1.9E-32 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 PRINTS PR00132 Glycosyl hydrolase family 2 signature 409 427 1.9E-32 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 PRINTS PR00132 Glycosyl hydrolase family 2 signature 171 186 1.9E-32 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 PRINTS PR00132 Glycosyl hydrolase family 2 signature 583 598 1.9E-32 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 PRINTS PR00132 Glycosyl hydrolase family 2 signature 479 494 1.9E-32 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 Gene3D G3DSA:2.60.120.260 26 244 2.4E-89 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 SUPERFAMILY SSF51445 373 677 5.81E-83 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 Gene3D G3DSA:2.60.40.10 245 366 1.4E-26 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 SUPERFAMILY SSF74650 791 1075 1.88E-74 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 Pfam PF16353 Domain of unknown function(DUF4981) 691 780 1.5E-23 T 11-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 Gene3D G3DSA:2.70.98.10 790 1076 5.2E-78 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 Pfam PF00703 Glycosyl hydrolases family 2 245 366 2.1E-16 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 70 243 1.0E-45 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 419 444 - T 11-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 374 679 2.4E-90 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 Gene3D G3DSA:2.60.40.10 677 781 1.9E-28 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 SMART SM01038 805 1075 7.0E-111 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_0821 aed8af79d306c4abe2b97a4b6cd48291 1079 Pfam PF02929 Beta galactosidase small chain 809 1074 2.5E-65 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_3904 6a4b7c4230271c0ca51ed76f6d3e01d2 762 Gene3D G3DSA:2.40.170.20 46 762 5.6E-145 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_3904 6a4b7c4230271c0ca51ed76f6d3e01d2 762 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 162 3.2E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3904 6a4b7c4230271c0ca51ed76f6d3e01d2 762 SUPERFAMILY SSF56935 31 761 2.09E-111 T 11-10-2018 Patl_3904 6a4b7c4230271c0ca51ed76f6d3e01d2 762 Pfam PF00593 TonB dependent receptor 237 760 1.0E-43 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1178 ffd96f1a9ca0505a008d869022f733ca 376 Gene3D G3DSA:3.40.50.2000 175 348 3.8E-21 T 11-10-2018 Patl_1178 ffd96f1a9ca0505a008d869022f733ca 376 Gene3D G3DSA:3.40.50.2000 153 356 3.8E-21 T 11-10-2018 Patl_1178 ffd96f1a9ca0505a008d869022f733ca 376 SUPERFAMILY SSF53756 99 358 2.56E-27 T 11-10-2018 Patl_1178 ffd96f1a9ca0505a008d869022f733ca 376 Pfam PF13692 Glycosyl transferases group 1 192 328 7.6E-26 T 11-10-2018 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 9 87 4.6E-22 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 Gene3D G3DSA:1.10.730.10 455 578 1.6E-30 T 11-10-2018 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 SUPERFAMILY SSF55190 26 97 3.4E-21 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 Pfam PF00750 tRNA synthetases class I (R) 104 447 1.5E-132 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 Gene3D G3DSA:3.30.1360.70 1 106 2.5E-31 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 Pfam PF05746 DALR anticodon binding domain 461 578 2.3E-27 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 SUPERFAMILY SSF47323 455 578 2.16E-31 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 4 578 1.5E-170 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 1.8E-24 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 1.8E-24 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 1.8E-24 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 1.8E-24 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 SUPERFAMILY SSF52374 111 454 2.75E-87 T 11-10-2018 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 SMART SM00836 461 578 5.4E-31 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 SMART SM01016 1 87 1.2E-29 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 Gene3D G3DSA:3.40.50.620 108 454 7.2E-109 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_1359 29c0fb1e9ae70bfafb19d474a6300eac 578 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 578 26.152 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Patl_3426 70939f5b64072a46cab4e658a8364d9c 520 Pfam PF01425 Amidase 61 500 2.2E-90 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Patl_3426 70939f5b64072a46cab4e658a8364d9c 520 Gene3D G3DSA:3.90.1300.10 31 519 4.7E-166 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Patl_3426 70939f5b64072a46cab4e658a8364d9c 520 SUPERFAMILY SSF75304 36 516 3.53E-116 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Patl_3394 016d75255641ea630bb14adf9e4f137f 298 Gene3D G3DSA:3.30.60.70 89 129 1.3E-11 T 11-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 Patl_3394 016d75255641ea630bb14adf9e4f137f 298 Gene3D G3DSA:2.160.10.10 130 298 3.6E-65 T 11-10-2018 Patl_3394 016d75255641ea630bb14adf9e4f137f 298 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 212 243 4.7E-14 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_3394 016d75255641ea630bb14adf9e4f137f 298 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 295 38.318 T 11-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 Patl_3394 016d75255641ea630bb14adf9e4f137f 298 Gene3D G3DSA:3.30.70.2010 10 88 6.0E-18 T 11-10-2018 Patl_3394 016d75255641ea630bb14adf9e4f137f 298 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 89 129 2.0E-14 T 11-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 Patl_3394 016d75255641ea630bb14adf9e4f137f 298 SUPERFAMILY SSF51161 52 277 4.96E-37 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Patl_4275 a55b2fd7465da897bac6d28c8249bea6 279 Pfam PF11219 Protein of unknown function (DUF3014) 116 271 2.6E-55 T 11-10-2018 IPR021382 Protein of unknown function DUF3014 Patl_3725 c803af8848d0b080d37c7d033c6a813b 492 SUPERFAMILY SSF53067 2 243 3.4E-74 T 11-10-2018 Patl_3725 c803af8848d0b080d37c7d033c6a813b 492 SUPERFAMILY SSF53067 242 490 7.26E-61 T 11-10-2018 Patl_3725 c803af8848d0b080d37c7d033c6a813b 492 Gene3D G3DSA:3.30.420.40 1 241 1.9E-90 T 11-10-2018 Patl_3725 c803af8848d0b080d37c7d033c6a813b 492 PIRSF PIRSF000538 1 492 5.3E-137 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Patl_3725 c803af8848d0b080d37c7d033c6a813b 492 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 1.8E-74 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Patl_3725 c803af8848d0b080d37c7d033c6a813b 492 Gene3D G3DSA:3.30.420.40 242 492 1.1E-80 T 11-10-2018 Patl_3725 c803af8848d0b080d37c7d033c6a813b 492 TIGRFAM TIGR01312 XylB: xylulokinase 3 486 1.5E-178 T 11-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 Patl_3725 c803af8848d0b080d37c7d033c6a813b 492 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 445 1.2E-32 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Patl_3725 c803af8848d0b080d37c7d033c6a813b 492 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Patl_2678 a68db0413e2e2ddac6e89ec72bda5b2c 515 Gene3D G3DSA:3.30.450.40 184 336 1.4E-22 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_2678 a68db0413e2e2ddac6e89ec72bda5b2c 515 Pfam PF13185 GAF domain 186 328 1.2E-11 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_2678 a68db0413e2e2ddac6e89ec72bda5b2c 515 SUPERFAMILY SSF55073 345 502 1.57E-51 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_2678 a68db0413e2e2ddac6e89ec72bda5b2c 515 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 496 2.9E-52 T 11-10-2018 IPR000160 GGDEF domain Patl_2678 a68db0413e2e2ddac6e89ec72bda5b2c 515 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 500 1.1E-47 T 11-10-2018 IPR000160 GGDEF domain Patl_2678 a68db0413e2e2ddac6e89ec72bda5b2c 515 SMART SM00267 329 501 7.7E-68 T 11-10-2018 IPR000160 GGDEF domain Patl_2678 a68db0413e2e2ddac6e89ec72bda5b2c 515 SUPERFAMILY SSF55781 158 329 6.54E-25 T 11-10-2018 Patl_2678 a68db0413e2e2ddac6e89ec72bda5b2c 515 Gene3D G3DSA:3.30.70.270 337 512 3.0E-60 T 11-10-2018 Patl_2678 a68db0413e2e2ddac6e89ec72bda5b2c 515 SMART SM00065 185 337 0.0022 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_2787 31958734b400aef034a2b60a1125002a 444 Gene3D G3DSA:3.30.70.360 218 336 1.4E-115 T 11-10-2018 Patl_2787 31958734b400aef034a2b60a1125002a 444 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 42 383 4.3E-86 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 Patl_2787 31958734b400aef034a2b60a1125002a 444 SUPERFAMILY SSF55031 221 322 4.19E-27 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Patl_2787 31958734b400aef034a2b60a1125002a 444 PIRSF PIRSF005962 26 444 4.1E-97 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 Patl_2787 31958734b400aef034a2b60a1125002a 444 Pfam PF01546 Peptidase family M20/M25/M40 98 396 3.2E-27 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 Patl_2787 31958734b400aef034a2b60a1125002a 444 Pfam PF07687 Peptidase dimerisation domain 219 317 3.2E-12 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain Patl_2787 31958734b400aef034a2b60a1125002a 444 SUPERFAMILY SSF53187 30 441 1.83E-73 T 11-10-2018 Patl_2787 31958734b400aef034a2b60a1125002a 444 Gene3D G3DSA:3.40.630.10 42 398 1.4E-115 T 11-10-2018 Patl_2495 e7a1c9a0f420040f380a76052de831f7 326 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 326 3.8E-114 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Patl_2495 e7a1c9a0f420040f380a76052de831f7 326 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 7 325 48.34 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Patl_2495 e7a1c9a0f420040f380a76052de831f7 326 Gene3D G3DSA:3.30.930.10 6 326 1.7E-124 T 11-10-2018 Patl_2495 e7a1c9a0f420040f380a76052de831f7 326 SUPERFAMILY SSF55681 91 326 7.17E-83 T 11-10-2018 Patl_2495 e7a1c9a0f420040f380a76052de831f7 326 SUPERFAMILY SSF46589 13 98 4.76E-20 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Patl_2495 e7a1c9a0f420040f380a76052de831f7 326 Pfam PF01409 tRNA synthetases class II core domain (F) 91 325 2.6E-105 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Patl_2495 e7a1c9a0f420040f380a76052de831f7 326 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 86 1.3E-23 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Patl_4078 d247f07b4473c6248efe9ecb3677dba4 259 SUPERFAMILY SSF51161 5 253 3.33E-63 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Patl_4078 d247f07b4473c6248efe9ecb3677dba4 259 Gene3D G3DSA:1.10.3130.10 1 138 1.8E-49 T 11-10-2018 Patl_4078 d247f07b4473c6248efe9ecb3677dba4 259 Gene3D G3DSA:2.160.10.10 139 258 1.3E-35 T 11-10-2018 Patl_4078 d247f07b4473c6248efe9ecb3677dba4 259 PIRSF PIRSF000441 73 258 6.4E-59 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Patl_4078 d247f07b4473c6248efe9ecb3677dba4 259 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 190 222 9.5E-8 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_4078 d247f07b4473c6248efe9ecb3677dba4 259 SMART SM00971 5 109 2.9E-55 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Patl_4078 d247f07b4473c6248efe9ecb3677dba4 259 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 198 226 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Patl_4078 d247f07b4473c6248efe9ecb3677dba4 259 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 80 238 1.3E-71 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Patl_4078 d247f07b4473c6248efe9ecb3677dba4 259 Pfam PF06426 Serine acetyltransferase, N-terminal 6 108 4.4E-36 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Patl_2160 859ffa605b026c62b7831172b0f4e10e 322 Pfam PF06463 Molybdenum Cofactor Synthesis C 180 305 8.6E-34 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Patl_2160 859ffa605b026c62b7831172b0f4e10e 322 Gene3D G3DSA:3.20.20.70 1 322 3.1E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2160 859ffa605b026c62b7831172b0f4e10e 322 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 2 322 35.479 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Patl_2160 859ffa605b026c62b7831172b0f4e10e 322 Pfam PF13353 4Fe-4S single cluster domain 20 120 9.5E-7 T 11-10-2018 Patl_2160 859ffa605b026c62b7831172b0f4e10e 322 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 322 8.7E-100 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Patl_2160 859ffa605b026c62b7831172b0f4e10e 322 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Patl_2160 859ffa605b026c62b7831172b0f4e10e 322 Pfam PF04055 Radical SAM superfamily 16 175 2.4E-24 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Patl_2160 859ffa605b026c62b7831172b0f4e10e 322 SUPERFAMILY SSF102114 2 272 6.67E-69 T 11-10-2018 Patl_2160 859ffa605b026c62b7831172b0f4e10e 322 SMART SM00729 11 214 6.1E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Patl_0353 25f1e1a316193b9d68e6cd9ac881ef84 691 SUPERFAMILY SSF52540 387 597 2.49E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0353 25f1e1a316193b9d68e6cd9ac881ef84 691 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 26 661 5.7E-232 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 Patl_0353 25f1e1a316193b9d68e6cd9ac881ef84 691 Gene3D G3DSA:2.40.50.140 45 141 3.2E-13 T 11-10-2018 Patl_0353 25f1e1a316193b9d68e6cd9ac881ef84 691 Gene3D G3DSA:1.10.150.20 1 41 1.9E-5 T 11-10-2018 Patl_0353 25f1e1a316193b9d68e6cd9ac881ef84 691 Gene3D G3DSA:3.40.50.300 455 628 4.5E-51 T 11-10-2018 Patl_0353 25f1e1a316193b9d68e6cd9ac881ef84 691 SMART SM00487 263 457 5.5E-29 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_0353 25f1e1a316193b9d68e6cd9ac881ef84 691 Pfam PF00271 Helicase conserved C-terminal domain 476 586 2.4E-18 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_0353 25f1e1a316193b9d68e6cd9ac881ef84 691 SUPERFAMILY SSF52540 194 451 7.86E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0353 25f1e1a316193b9d68e6cd9ac881ef84 691 SUPERFAMILY SSF50249 6 172 9.0E-42 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_0353 25f1e1a316193b9d68e6cd9ac881ef84 691 Pfam PF17191 RecG wedge domain 10 170 1.8E-22 T 11-10-2018 IPR033454 RecG, wedge domain Patl_0353 25f1e1a316193b9d68e6cd9ac881ef84 691 Gene3D G3DSA:3.40.50.300 207 448 1.5E-85 T 11-10-2018 Patl_0353 25f1e1a316193b9d68e6cd9ac881ef84 691 Pfam PF00270 DEAD/DEAH box helicase 270 429 4.8E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Patl_0353 25f1e1a316193b9d68e6cd9ac881ef84 691 SMART SM00490 503 587 2.0E-21 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_1036 8614106ccc6e3824b8b8d62bada30195 354 Gene3D G3DSA:2.40.420.20 277 344 3.5E-72 T 11-10-2018 Patl_1036 8614106ccc6e3824b8b8d62bada30195 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 266 1.7E-30 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Patl_1036 8614106ccc6e3824b8b8d62bada30195 354 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 346 3.5E-76 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Patl_1036 8614106ccc6e3824b8b8d62bada30195 354 Gene3D G3DSA:2.40.30.170 53 276 3.5E-72 T 11-10-2018 Patl_1036 8614106ccc6e3824b8b8d62bada30195 354 Gene3D G3DSA:2.40.50.100 66 194 3.5E-72 T 11-10-2018 Patl_1036 8614106ccc6e3824b8b8d62bada30195 354 Gene3D G3DSA:1.10.287.470 101 160 3.5E-72 T 11-10-2018 Patl_1036 8614106ccc6e3824b8b8d62bada30195 354 SUPERFAMILY SSF111369 55 272 2.62E-39 T 11-10-2018 Patl_3125 b9dac707b27281dfa217f5e44c814f2f 426 SUPERFAMILY SSF52954 327 423 6.34E-22 T 11-10-2018 Patl_3125 b9dac707b27281dfa217f5e44c814f2f 426 Pfam PF13393 Histidyl-tRNA synthetase 10 312 2.8E-49 T 11-10-2018 Patl_3125 b9dac707b27281dfa217f5e44c814f2f 426 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 422 33.509 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Patl_3125 b9dac707b27281dfa217f5e44c814f2f 426 Pfam PF03129 Anticodon binding domain 330 422 1.0E-8 T 11-10-2018 IPR004154 Anticodon-binding Patl_3125 b9dac707b27281dfa217f5e44c814f2f 426 PIRSF PIRSF001549 2 424 1.1E-122 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Patl_3125 b9dac707b27281dfa217f5e44c814f2f 426 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 407 2.7E-156 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Patl_3125 b9dac707b27281dfa217f5e44c814f2f 426 SUPERFAMILY SSF55681 5 317 9.57E-105 T 11-10-2018 Patl_3125 b9dac707b27281dfa217f5e44c814f2f 426 Gene3D G3DSA:3.40.50.800 327 423 4.9E-21 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily Patl_3125 b9dac707b27281dfa217f5e44c814f2f 426 Gene3D G3DSA:3.30.930.10 2 322 5.3E-118 T 11-10-2018 Patl_3547 40b87a18de6ae4d83dc133380aa29620 138 SUPERFAMILY SSF52172 1 136 8.97E-20 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3547 40b87a18de6ae4d83dc133380aa29620 138 Pfam PF00072 Response regulator receiver domain 6 122 4.0E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3547 40b87a18de6ae4d83dc133380aa29620 138 SMART SM00448 4 134 3.6E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3547 40b87a18de6ae4d83dc133380aa29620 138 Gene3D G3DSA:3.40.50.2300 1 138 1.4E-23 T 11-10-2018 Patl_2537 6cf9e6f3832d150ef519c422cec6bc2d 415 Gene3D G3DSA:2.170.190.11 55 149 1.5E-144 T 11-10-2018 Patl_2537 6cf9e6f3832d150ef519c422cec6bc2d 415 SUPERFAMILY SSF63867 336 412 1.83E-21 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Patl_2537 6cf9e6f3832d150ef519c422cec6bc2d 415 Pfam PF03453 MoeA N-terminal region (domain I and II) 13 175 1.5E-46 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Patl_2537 6cf9e6f3832d150ef519c422cec6bc2d 415 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 261 294 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Patl_2537 6cf9e6f3832d150ef519c422cec6bc2d 415 Pfam PF00994 Probable molybdopterin binding domain 189 324 2.1E-25 T 11-10-2018 IPR001453 MoaB/Mog domain Patl_2537 6cf9e6f3832d150ef519c422cec6bc2d 415 Gene3D G3DSA:3.40.980.10 30 334 1.5E-144 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Patl_2537 6cf9e6f3832d150ef519c422cec6bc2d 415 Gene3D G3DSA:2.40.340.10 335 405 1.5E-144 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Patl_2537 6cf9e6f3832d150ef519c422cec6bc2d 415 SMART SM00852 188 325 7.8E-41 T 11-10-2018 IPR001453 MoaB/Mog domain Patl_2537 6cf9e6f3832d150ef519c422cec6bc2d 415 Gene3D G3DSA:3.90.105.10 31 182 1.5E-144 T 11-10-2018 Patl_2537 6cf9e6f3832d150ef519c422cec6bc2d 415 SUPERFAMILY SSF53218 185 330 3.4E-42 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Patl_2537 6cf9e6f3832d150ef519c422cec6bc2d 415 Pfam PF03454 MoeA C-terminal region (domain IV) 339 410 6.6E-18 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Patl_2537 6cf9e6f3832d150ef519c422cec6bc2d 415 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 184 321 4.1E-34 T 11-10-2018 IPR001453 MoaB/Mog domain Patl_2537 6cf9e6f3832d150ef519c422cec6bc2d 415 SUPERFAMILY SSF63882 9 184 5.1E-56 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Patl_1878 ac3ff2aabafc2474930291ff76b18391 305 SUPERFAMILY SSF46785 2 85 4.84E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1878 ac3ff2aabafc2474930291ff76b18391 305 Gene3D G3DSA:3.40.190.10 172 266 4.8E-56 T 11-10-2018 Patl_1878 ac3ff2aabafc2474930291ff76b18391 305 SUPERFAMILY SSF53850 90 294 1.03E-41 T 11-10-2018 Patl_1878 ac3ff2aabafc2474930291ff76b18391 305 Gene3D G3DSA:3.40.190.10 90 291 4.8E-56 T 11-10-2018 Patl_1878 ac3ff2aabafc2474930291ff76b18391 305 Pfam PF03466 LysR substrate binding domain 100 294 2.0E-15 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_1878 ac3ff2aabafc2474930291ff76b18391 305 Gene3D G3DSA:1.10.10.10 1 89 9.5E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1878 ac3ff2aabafc2474930291ff76b18391 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1878 ac3ff2aabafc2474930291ff76b18391 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1878 ac3ff2aabafc2474930291ff76b18391 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1878 ac3ff2aabafc2474930291ff76b18391 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.7E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0832 d1668007b2a72d090750019a019dc4ae 979 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 37 190 7.2E-16 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_0832 d1668007b2a72d090750019a019dc4ae 979 Gene3D G3DSA:3.20.20.80 318 573 1.6E-48 T 11-10-2018 Patl_0832 d1668007b2a72d090750019a019dc4ae 979 SUPERFAMILY SSF51445 313 567 8.44E-47 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_0832 d1668007b2a72d090750019a019dc4ae 979 Pfam PF00703 Glycosyl hydrolases family 2 209 315 8.0E-16 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0832 d1668007b2a72d090750019a019dc4ae 979 PRINTS PR00132 Glycosyl hydrolase family 2 signature 117 132 4.7E-12 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0832 d1668007b2a72d090750019a019dc4ae 979 PRINTS PR00132 Glycosyl hydrolase family 2 signature 327 341 4.7E-12 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0832 d1668007b2a72d090750019a019dc4ae 979 PRINTS PR00132 Glycosyl hydrolase family 2 signature 422 437 4.7E-12 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0832 d1668007b2a72d090750019a019dc4ae 979 PRINTS PR00132 Glycosyl hydrolase family 2 signature 358 376 4.7E-12 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0832 d1668007b2a72d090750019a019dc4ae 979 Gene3D G3DSA:2.60.40.10 201 315 1.2E-21 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0832 d1668007b2a72d090750019a019dc4ae 979 Gene3D G3DSA:2.60.120.260 30 194 3.0E-34 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0832 d1668007b2a72d090750019a019dc4ae 979 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 321 482 3.9E-21 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_0832 d1668007b2a72d090750019a019dc4ae 979 SUPERFAMILY SSF49303 208 315 1.73E-14 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Patl_0832 d1668007b2a72d090750019a019dc4ae 979 Gene3D G3DSA:2.60.40.10 578 655 1.2E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0832 d1668007b2a72d090750019a019dc4ae 979 SUPERFAMILY SSF49785 30 194 4.5E-33 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0832 d1668007b2a72d090750019a019dc4ae 979 Gene3D G3DSA:2.60.40.10 661 764 4.0E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0832 d1668007b2a72d090750019a019dc4ae 979 Pfam PF16355 Domain of unknown function (DUF4982) 586 647 4.2E-10 T 11-10-2018 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_2097 aef39651518a2706cca4940c3b0a315c 398 Gene3D G3DSA:1.10.287.130 162 229 9.0E-22 T 11-10-2018 Patl_2097 aef39651518a2706cca4940c3b0a315c 398 Gene3D G3DSA:3.30.565.10 231 391 1.1E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2097 aef39651518a2706cca4940c3b0a315c 398 Pfam PF00512 His Kinase A (phospho-acceptor) domain 158 230 8.7E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2097 aef39651518a2706cca4940c3b0a315c 398 Gene3D G3DSA:3.30.450.20 14 136 6.3E-41 T 11-10-2018 Patl_2097 aef39651518a2706cca4940c3b0a315c 398 Pfam PF00989 PAS fold 20 132 1.2E-20 T 11-10-2018 IPR013767 PAS fold GO:0006355 Patl_2097 aef39651518a2706cca4940c3b0a315c 398 SMART SM00091 19 85 3.2E-15 T 11-10-2018 IPR000014 PAS domain Patl_2097 aef39651518a2706cca4940c3b0a315c 398 SUPERFAMILY SSF55785 30 139 6.98E-29 T 11-10-2018 IPR035965 PAS domain superfamily Patl_2097 aef39651518a2706cca4940c3b0a315c 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 362 2.8E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2097 aef39651518a2706cca4940c3b0a315c 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 381 2.8E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2097 aef39651518a2706cca4940c3b0a315c 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 343 2.8E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2097 aef39651518a2706cca4940c3b0a315c 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 329 2.8E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2097 aef39651518a2706cca4940c3b0a315c 398 SMART SM00388 157 232 1.7E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2097 aef39651518a2706cca4940c3b0a315c 398 SUPERFAMILY SSF55874 223 382 3.54E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2097 aef39651518a2706cca4940c3b0a315c 398 SUPERFAMILY SSF47384 151 229 6.08E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_2097 aef39651518a2706cca4940c3b0a315c 398 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 139 8.0E-29 T 11-10-2018 IPR000014 PAS domain Patl_2097 aef39651518a2706cca4940c3b0a315c 398 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 276 382 1.6E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2097 aef39651518a2706cca4940c3b0a315c 398 SMART SM00387 275 384 9.5E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1982 91bc7ced3fe185272fa120c21fcbb68d 619 SUPERFAMILY SSF51735 399 498 1.61E-6 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1982 91bc7ced3fe185272fa120c21fcbb68d 619 Gene3D G3DSA:1.20.1530.20 3 390 8.5E-17 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Patl_1982 91bc7ced3fe185272fa120c21fcbb68d 619 Gene3D G3DSA:3.40.50.720 397 512 7.7E-7 T 11-10-2018 Patl_1982 91bc7ced3fe185272fa120c21fcbb68d 619 Pfam PF00999 Sodium/hydrogen exchanger family 9 381 7.0E-36 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Patl_0810 710058d887d4403c77cfc6e4a3cd57f4 450 SUPERFAMILY SSF49785 332 449 2.04E-24 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0810 710058d887d4403c77cfc6e4a3cd57f4 450 Pfam PF03422 Carbohydrate binding module (family 6) 342 450 1.0E-27 T 11-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 Patl_0810 710058d887d4403c77cfc6e4a3cd57f4 450 Gene3D G3DSA:2.115.10.20 18 313 8.9E-85 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Patl_0810 710058d887d4403c77cfc6e4a3cd57f4 450 SUPERFAMILY SSF75005 9 301 1.57E-65 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Patl_0810 710058d887d4403c77cfc6e4a3cd57f4 450 SMART SM00606 313 450 5.4E-25 T 11-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 Patl_0810 710058d887d4403c77cfc6e4a3cd57f4 450 Gene3D G3DSA:2.60.120.260 315 450 2.8E-34 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0810 710058d887d4403c77cfc6e4a3cd57f4 450 Pfam PF04616 Glycosyl hydrolases family 43 24 299 2.4E-45 T 11-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Patl_3169 97947fae287c61709c828d50791fc63c 190 PRINTS PR00813 Bacterial general secretion pathway protein G signature 17 42 6.1E-5 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Patl_3169 97947fae287c61709c828d50791fc63c 190 PRINTS PR00813 Bacterial general secretion pathway protein G signature 53 71 6.1E-5 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Patl_3169 97947fae287c61709c828d50791fc63c 190 Pfam PF12019 Type II transport protein GspH 54 165 4.3E-10 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 Patl_3169 97947fae287c61709c828d50791fc63c 190 Pfam PF07963 Prokaryotic N-terminal methylation motif 14 37 1.2E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3169 97947fae287c61709c828d50791fc63c 190 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3169 97947fae287c61709c828d50791fc63c 190 SUPERFAMILY SSF54523 19 105 1.02E-13 T 11-10-2018 Patl_3169 97947fae287c61709c828d50791fc63c 190 Gene3D G3DSA:3.30.700.10 19 164 1.1E-7 T 11-10-2018 Patl_3169 97947fae287c61709c828d50791fc63c 190 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 37 8.9E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0732 48d52a719301b4a29c8d3de245da46af 929 Gene3D G3DSA:3.40.50.300 461 733 1.2E-45 T 11-10-2018 Patl_0732 48d52a719301b4a29c8d3de245da46af 929 Gene3D G3DSA:1.10.10.160 564 655 1.2E-45 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily Patl_0732 48d52a719301b4a29c8d3de245da46af 929 Pfam PF13361 UvrD-like helicase C-terminal domain 831 899 7.1E-14 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Patl_0732 48d52a719301b4a29c8d3de245da46af 929 SUPERFAMILY SSF52540 464 902 1.64E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0732 48d52a719301b4a29c8d3de245da46af 929 Pfam PF00580 UvrD/REP helicase N-terminal domain 459 733 7.7E-42 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Patl_0732 48d52a719301b4a29c8d3de245da46af 929 Gene3D G3DSA:3.40.50.300 745 925 5.9E-26 T 11-10-2018 Patl_1276 610d87229c5c49feb532e3812a1cdb09 571 SUPERFAMILY SSF55681 10 480 1.11E-105 T 11-10-2018 Patl_1276 610d87229c5c49feb532e3812a1cdb09 571 Gene3D G3DSA:3.90.960.10 240 391 1.1E-241 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Patl_1276 610d87229c5c49feb532e3812a1cdb09 571 PIRSF PIRSF001535 1 571 6.3E-273 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Patl_1276 610d87229c5c49feb532e3812a1cdb09 571 Gene3D G3DSA:3.30.930.10 11 467 1.1E-241 T 11-10-2018 Patl_1276 610d87229c5c49feb532e3812a1cdb09 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 461 1.6E-47 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1276 610d87229c5c49feb532e3812a1cdb09 571 Pfam PF03129 Anticodon binding domain 477 569 1.1E-22 T 11-10-2018 IPR004154 Anticodon-binding Patl_1276 610d87229c5c49feb532e3812a1cdb09 571 SUPERFAMILY SSF55826 218 392 1.24E-32 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Patl_1276 610d87229c5c49feb532e3812a1cdb09 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 2.2E-26 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Patl_1276 610d87229c5c49feb532e3812a1cdb09 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.941 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Patl_1276 610d87229c5c49feb532e3812a1cdb09 571 Gene3D G3DSA:3.40.50.800 4 556 1.1E-241 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily Patl_1276 610d87229c5c49feb532e3812a1cdb09 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 9.9E-248 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Patl_1276 610d87229c5c49feb532e3812a1cdb09 571 SUPERFAMILY SSF52954 465 570 6.95E-32 T 11-10-2018 Patl_1276 610d87229c5c49feb532e3812a1cdb09 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.2E-19 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Patl_1276 610d87229c5c49feb532e3812a1cdb09 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.2E-19 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Patl_1276 610d87229c5c49feb532e3812a1cdb09 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.2E-19 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Patl_1276 610d87229c5c49feb532e3812a1cdb09 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.2E-19 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Patl_4116 8612d4d226e8c7959a87be0c0f106a92 447 Pfam PF01547 Bacterial extracellular solute-binding protein 50 336 5.8E-54 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein Patl_4116 8612d4d226e8c7959a87be0c0f106a92 447 Gene3D G3DSA:3.40.190.10 52 404 3.0E-155 T 11-10-2018 Patl_4116 8612d4d226e8c7959a87be0c0f106a92 447 SUPERFAMILY SSF53850 33 441 9.57E-80 T 11-10-2018 Patl_4116 8612d4d226e8c7959a87be0c0f106a92 447 Gene3D G3DSA:3.40.190.10 148 433 3.0E-155 T 11-10-2018 Patl_2151 47733f38835588a8c66da448d7794a7f 174 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 5.7E-71 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 Patl_2151 47733f38835588a8c66da448d7794a7f 174 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Patl_2151 47733f38835588a8c66da448d7794a7f 174 PIRSF PIRSF038996 1 172 6.5E-66 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 Patl_2151 47733f38835588a8c66da448d7794a7f 174 SUPERFAMILY SSF52218 4 171 2.75E-51 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_2151 47733f38835588a8c66da448d7794a7f 174 Pfam PF00258 Flavodoxin 6 160 9.7E-30 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Patl_2151 47733f38835588a8c66da448d7794a7f 174 Gene3D G3DSA:3.40.50.360 3 174 1.5E-53 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_2192 11a5743280926ab2e0c1faedd1c27333 376 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 98 136 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Patl_2192 11a5743280926ab2e0c1faedd1c27333 376 SUPERFAMILY SSF53187 4 375 1.09E-65 T 11-10-2018 Patl_2192 11a5743280926ab2e0c1faedd1c27333 376 Pfam PF01546 Peptidase family M20/M25/M40 63 372 3.3E-44 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 Patl_2192 11a5743280926ab2e0c1faedd1c27333 376 Pfam PF07687 Peptidase dimerisation domain 176 280 1.9E-23 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain Patl_2192 11a5743280926ab2e0c1faedd1c27333 376 Gene3D G3DSA:3.30.70.360 180 293 4.5E-129 T 11-10-2018 Patl_2192 11a5743280926ab2e0c1faedd1c27333 376 SUPERFAMILY SSF55031 180 290 4.49E-29 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Patl_2192 11a5743280926ab2e0c1faedd1c27333 376 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 376 52.01 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Patl_2192 11a5743280926ab2e0c1faedd1c27333 376 Gene3D G3DSA:3.40.630.10 8 363 4.5E-129 T 11-10-2018 Patl_2192 11a5743280926ab2e0c1faedd1c27333 376 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 374 1.2E-166 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 Gene3D G3DSA:3.30.2090.10 721 813 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 SUPERFAMILY SSF82693 672 861 3.4E-19 T 11-10-2018 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 SUPERFAMILY SSF82693 39 133 1.92E-28 T 11-10-2018 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 SUPERFAMILY SSF82866 835 1030 2.09E-37 T 11-10-2018 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 Gene3D G3DSA:3.30.70.1430 567 668 0.0 T 11-10-2018 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 Gene3D G3DSA:3.30.70.1430 39 821 0.0 T 11-10-2018 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 SUPERFAMILY SSF82693 565 671 9.16E-31 T 11-10-2018 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 SUPERFAMILY SSF82866 297 497 6.15E-50 T 11-10-2018 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 SUPERFAMILY SSF82714 722 805 4.58E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 11-10-2018 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 Pfam PF00873 AcrB/AcrD/AcrF family 2 1031 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 SUPERFAMILY SSF82714 183 273 2.75E-22 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1046 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 Gene3D G3DSA:1.20.1640.10 513 1027 0.0 T 11-10-2018 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 Gene3D G3DSA:3.30.70.1440 669 870 0.0 T 11-10-2018 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 4.3E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 4.3E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 4.3E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 4.3E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 4.3E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 4.3E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 4.3E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 4.3E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 4.3E-103 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 SUPERFAMILY SSF82693 136 331 3.92E-23 T 11-10-2018 Patl_3799 77f385f2b3fee10a8c73f1b3dab9ccc3 1053 Gene3D G3DSA:3.30.70.1320 134 333 0.0 T 11-10-2018 Patl_2141 e5a4de4aeec98ef7df1cc39f9f502b5f 616 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 54 172 5.3E-6 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Patl_2141 e5a4de4aeec98ef7df1cc39f9f502b5f 616 Gene3D G3DSA:2.40.110.10 175 303 1.8E-25 T 11-10-2018 Patl_2141 e5a4de4aeec98ef7df1cc39f9f502b5f 616 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 177 284 6.1E-16 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Patl_2141 e5a4de4aeec98ef7df1cc39f9f502b5f 616 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 21 49 2.0E-6 T 11-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria Patl_2141 e5a4de4aeec98ef7df1cc39f9f502b5f 616 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 498 612 7.6E-26 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Patl_2141 e5a4de4aeec98ef7df1cc39f9f502b5f 616 SUPERFAMILY SSF47203 303 479 2.42E-36 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_2141 e5a4de4aeec98ef7df1cc39f9f502b5f 616 Gene3D G3DSA:1.10.540.10 22 173 3.7E-10 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Patl_2141 e5a4de4aeec98ef7df1cc39f9f502b5f 616 Gene3D G3DSA:1.20.140.10 304 472 1.2E-39 T 11-10-2018 Patl_2141 e5a4de4aeec98ef7df1cc39f9f502b5f 616 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 300 470 6.0E-16 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_2141 e5a4de4aeec98ef7df1cc39f9f502b5f 616 SUPERFAMILY SSF56645 51 291 5.76E-45 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_1927 a705c28d1a7e58ed5e8823802836d8f5 408 Pfam PF07690 Major Facilitator Superfamily 26 362 8.7E-40 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_1927 a705c28d1a7e58ed5e8823802836d8f5 408 Gene3D G3DSA:1.20.1250.20 22 404 7.1E-49 T 11-10-2018 Patl_1927 a705c28d1a7e58ed5e8823802836d8f5 408 PRINTS PR01035 Tetracycline resistance protein signature 28 44 3.7E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Patl_1927 a705c28d1a7e58ed5e8823802836d8f5 408 PRINTS PR01035 Tetracycline resistance protein signature 269 289 3.7E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Patl_1927 a705c28d1a7e58ed5e8823802836d8f5 408 PRINTS PR01035 Tetracycline resistance protein signature 356 379 3.7E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Patl_1927 a705c28d1a7e58ed5e8823802836d8f5 408 PRINTS PR01035 Tetracycline resistance protein signature 58 77 3.7E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Patl_1927 a705c28d1a7e58ed5e8823802836d8f5 408 SUPERFAMILY SSF103473 24 405 1.96E-51 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_0753 94160e98527464f00b433154b3a4c021 318 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 311 7.7E-23 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Patl_0753 94160e98527464f00b433154b3a4c021 318 SUPERFAMILY SSF53686 8 316 1.58E-52 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Patl_0753 94160e98527464f00b433154b3a4c021 318 PIRSF PIRSF006278 2 318 6.8E-70 T 11-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase Patl_0753 94160e98527464f00b433154b3a4c021 318 Gene3D G3DSA:3.40.50.1100 50 153 6.0E-69 T 11-10-2018 Patl_0753 94160e98527464f00b433154b3a4c021 318 Gene3D G3DSA:3.40.50.1100 17 314 6.0E-69 T 11-10-2018 Patl_2768 dedde515c526319cb68786f4ad2b8497 257 SUPERFAMILY SSF46785 18 90 6.16E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2768 dedde515c526319cb68786f4ad2b8497 257 SMART SM00866 108 246 1.8E-19 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Patl_2768 dedde515c526319cb68786f4ad2b8497 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 1.3E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2768 dedde515c526319cb68786f4ad2b8497 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 1.3E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2768 dedde515c526319cb68786f4ad2b8497 257 SMART SM00345 27 86 2.1E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2768 dedde515c526319cb68786f4ad2b8497 257 Gene3D G3DSA:3.40.1410.10 98 254 6.1E-28 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Patl_2768 dedde515c526319cb68786f4ad2b8497 257 Gene3D G3DSA:1.10.10.10 3 86 4.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2768 dedde515c526319cb68786f4ad2b8497 257 Pfam PF07702 UTRA domain 109 246 7.0E-21 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Patl_2768 dedde515c526319cb68786f4ad2b8497 257 SUPERFAMILY SSF64288 74 252 9.58E-31 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Patl_2768 dedde515c526319cb68786f4ad2b8497 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 86 4.0E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_4266 437a39196dc5d025613ef06d54a5d4ea 401 Gene3D G3DSA:3.50.50.100 1 383 1.2E-97 T 11-10-2018 Patl_4266 437a39196dc5d025613ef06d54a5d4ea 401 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 305 1.4E-46 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Patl_4266 437a39196dc5d025613ef06d54a5d4ea 401 SUPERFAMILY SSF51905 2 191 1.42E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_4266 437a39196dc5d025613ef06d54a5d4ea 401 SUPERFAMILY SSF51905 135 319 1.0E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1434 7570453d3ee0e2670a37bf6029833d71 543 PIRSF PIRSF500060 5 526 1.7E-213 T 11-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria Patl_1434 7570453d3ee0e2670a37bf6029833d71 543 Pfam PF01645 Conserved region in glutamate synthase 154 470 1.9E-81 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Patl_1434 7570453d3ee0e2670a37bf6029833d71 543 Gene3D G3DSA:3.20.20.70 147 498 8.5E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_1434 7570453d3ee0e2670a37bf6029833d71 543 SUPERFAMILY SSF51395 16 501 2.83E-129 T 11-10-2018 Patl_1434 7570453d3ee0e2670a37bf6029833d71 543 PIRSF PIRSF006429 2 538 1.1E-153 T 11-10-2018 IPR024188 Glutamate synthase large subunit-like protein Patl_0199 f056a25d803d5fe67ab871b848d94d1e 443 SUPERFAMILY SSF55920 161 438 7.98E-56 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like Patl_0199 f056a25d803d5fe67ab871b848d94d1e 443 Gene3D G3DSA:3.90.230.10 159 441 2.5E-77 T 11-10-2018 Patl_0199 f056a25d803d5fe67ab871b848d94d1e 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Patl_0199 f056a25d803d5fe67ab871b848d94d1e 443 Gene3D G3DSA:3.40.350.10 1 157 5.4E-65 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Patl_0199 f056a25d803d5fe67ab871b848d94d1e 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 60.473 T 11-10-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 Patl_0199 f056a25d803d5fe67ab871b848d94d1e 443 Pfam PF00557 Metallopeptidase family M24 167 429 1.4E-44 T 11-10-2018 IPR000994 Peptidase M24 Patl_3008 769361eca9d6bd2a0c0cb3dc6f2b863c 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 294 2.2E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Patl_3008 769361eca9d6bd2a0c0cb3dc6f2b863c 297 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 2.0E-13 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Patl_3008 769361eca9d6bd2a0c0cb3dc6f2b863c 297 SUPERFAMILY SSF161098 90 277 8.5E-21 T 11-10-2018 IPR035906 MetI-like superfamily Patl_3008 769361eca9d6bd2a0c0cb3dc6f2b863c 297 Gene3D G3DSA:1.10.3720.10 85 292 1.2E-17 T 11-10-2018 IPR035906 MetI-like superfamily Patl_2375 7f09f04ec3b9ebe525b88c87a2351462 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 6.4E-36 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 Patl_2375 7f09f04ec3b9ebe525b88c87a2351462 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 2 101 28.384 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS Patl_2375 7f09f04ec3b9ebe525b88c87a2351462 106 SUPERFAMILY SSF54736 21 105 7.32E-34 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Patl_2375 7f09f04ec3b9ebe525b88c87a2351462 106 Gene3D G3DSA:3.30.1390.10 1 106 1.0E-43 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Patl_3168 b87b7a261706dce23bab48dfdee31953 130 SUPERFAMILY SSF54523 13 122 4.87E-19 T 11-10-2018 Patl_3168 b87b7a261706dce23bab48dfdee31953 130 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 34 114 2.8E-18 T 11-10-2018 IPR031982 Type IV minor pilin ComP Patl_3168 b87b7a261706dce23bab48dfdee31953 130 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 33 1.3E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3168 b87b7a261706dce23bab48dfdee31953 130 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 33 7.8E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3168 b87b7a261706dce23bab48dfdee31953 130 Gene3D G3DSA:3.30.700.10 13 128 6.8E-20 T 11-10-2018 Patl_1173 b33fc2bd1c9e2723968a1cda140d01c2 497 TIGRFAM TIGR02914 EpsI_fam: EpsI family protein 345 494 7.8E-13 T 11-10-2018 IPR014263 Methanolan biosynthesis EpsI Patl_1173 b33fc2bd1c9e2723968a1cda140d01c2 497 TIGRFAM TIGR02602 8TM_EpsH: exosortase 41 273 2.1E-55 T 11-10-2018 IPR013426 Exosortase, EpsH-like Patl_1173 b33fc2bd1c9e2723968a1cda140d01c2 497 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 26 275 1.2E-53 T 11-10-2018 IPR019127 Exosortase Patl_1173 b33fc2bd1c9e2723968a1cda140d01c2 497 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 183 275 1.5E-15 T 11-10-2018 IPR026392 Exosortase/Archaeosortase domain Patl_1173 b33fc2bd1c9e2723968a1cda140d01c2 497 Pfam PF11984 Protein of unknown function (DUF3485) 311 494 4.1E-21 T 11-10-2018 IPR014263 Methanolan biosynthesis EpsI Patl_4288 b321cdca2b5fb0bfcf9ddf5aebb576e8 343 SUPERFAMILY SSF51197 13 306 3.98E-48 T 11-10-2018 Patl_4288 b321cdca2b5fb0bfcf9ddf5aebb576e8 343 Gene3D G3DSA:2.60.120.650 7 272 2.5E-42 T 11-10-2018 Patl_4288 b321cdca2b5fb0bfcf9ddf5aebb576e8 343 Pfam PF13621 Cupin-like domain 26 265 1.5E-49 T 11-10-2018 Patl_4288 b321cdca2b5fb0bfcf9ddf5aebb576e8 343 SMART SM00558 120 278 2.0E-5 T 11-10-2018 IPR003347 JmjC domain Patl_0340 43811ea2e9b801deff0de8a8a1ac2462 458 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 118 449 2.1E-75 T 11-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX Patl_1020 42b27acaa538da3e1ac7a4ed8004a29c 244 Gene3D G3DSA:1.10.10.10 1 68 2.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1020 42b27acaa538da3e1ac7a4ed8004a29c 244 SMART SM00345 8 67 4.2E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_1020 42b27acaa538da3e1ac7a4ed8004a29c 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 6.6E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_1020 42b27acaa538da3e1ac7a4ed8004a29c 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 6.6E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_1020 42b27acaa538da3e1ac7a4ed8004a29c 244 SUPERFAMILY SSF46785 2 71 1.26E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1020 42b27acaa538da3e1ac7a4ed8004a29c 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 67 5.3E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_1020 42b27acaa538da3e1ac7a4ed8004a29c 244 Gene3D G3DSA:3.40.1410.10 86 221 1.9E-30 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Patl_1020 42b27acaa538da3e1ac7a4ed8004a29c 244 SMART SM00866 88 225 7.7E-30 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Patl_1020 42b27acaa538da3e1ac7a4ed8004a29c 244 Pfam PF07702 UTRA domain 89 225 6.2E-29 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Patl_1020 42b27acaa538da3e1ac7a4ed8004a29c 244 SUPERFAMILY SSF64288 55 230 3.14E-38 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Patl_1020 42b27acaa538da3e1ac7a4ed8004a29c 244 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 3 230 3.0E-84 T 11-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 SUPERFAMILY SSF51905 149 314 1.2E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 Gene3D G3DSA:3.50.50.60 9 287 4.7E-80 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 SUPERFAMILY SSF55124 506 645 2.13E-27 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 PIRSF PIRSF037149 1 839 0.0 T 11-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 SUPERFAMILY SSF56014 637 811 1.96E-49 T 11-10-2018 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 683 699 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 637 760 5.0E-17 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 PRINTS PR00397 Sirohaem Fe-binding site signature 640 658 5.5E-7 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 PRINTS PR00397 Sirohaem Fe-binding site signature 683 701 5.5E-7 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.2E-9 T 11-10-2018 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 280 287 1.2E-9 T 11-10-2018 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 177 1.2E-9 T 11-10-2018 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 239 253 1.2E-9 T 11-10-2018 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 254 2.3E-16 T 11-10-2018 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 2.3E-16 T 11-10-2018 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.3E-16 T 11-10-2018 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 2.3E-16 T 11-10-2018 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 2.3E-16 T 11-10-2018 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 SUPERFAMILY SSF51905 3 191 2.16E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 8 804 0.0 T 11-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 Gene3D G3DSA:3.50.50.60 115 250 4.7E-80 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 Gene3D G3DSA:3.30.413.10 635 819 9.3E-32 T 11-10-2018 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 291 7.5E-46 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 Pfam PF04324 BFD-like [2Fe-2S] binding domain 427 474 2.1E-9 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 Gene3D G3DSA:1.10.10.1100 427 481 5.1E-10 T 11-10-2018 Patl_2534 4cfd81195ee16abfc9cb3ce799e1edfc 861 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 564 626 2.5E-10 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_2781 67eb87cbe96af39fd17055b9289e9785 538 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 258 272 - T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Patl_2781 67eb87cbe96af39fd17055b9289e9785 538 Gene3D G3DSA:3.30.560.10 48 472 6.2E-182 T 11-10-2018 Patl_2781 67eb87cbe96af39fd17055b9289e9785 538 Gene3D G3DSA:3.50.50.60 9 534 6.2E-182 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2781 67eb87cbe96af39fd17055b9289e9785 538 Pfam PF00732 GMC oxidoreductase 9 299 2.7E-91 T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Patl_2781 67eb87cbe96af39fd17055b9289e9785 538 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 86 109 - T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Patl_2781 67eb87cbe96af39fd17055b9289e9785 538 SUPERFAMILY SSF54373 294 477 1.08E-53 T 11-10-2018 Patl_2781 67eb87cbe96af39fd17055b9289e9785 538 SUPERFAMILY SSF51905 8 537 3.08E-89 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2781 67eb87cbe96af39fd17055b9289e9785 538 PIRSF PIRSF000137 1 538 2.5E-154 T 11-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Patl_2781 67eb87cbe96af39fd17055b9289e9785 538 Pfam PF05199 GMC oxidoreductase 391 529 3.5E-43 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 Pfam PF00696 Amino acid kinase family 2 284 7.3E-43 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 Gene3D G3DSA:3.30.360.10 626 796 9.9E-118 T 11-10-2018 Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 SUPERFAMILY SSF55021 305 381 1.05E-21 T 11-10-2018 Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 SUPERFAMILY SSF53633 1 298 3.4E-72 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 SUPERFAMILY SSF55021 384 473 1.18E-21 T 11-10-2018 Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 607 2.8E-25 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 SUPERFAMILY SSF51735 465 637 2.33E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 Gene3D G3DSA:3.40.1160.10 3 295 3.5E-81 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 Gene3D G3DSA:3.30.2130.10 303 463 2.5E-48 T 11-10-2018 Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 Gene3D G3DSA:1.20.120.1320 41 142 3.5E-81 T 11-10-2018 Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 Pfam PF01842 ACT domain 324 376 2.9E-10 T 11-10-2018 IPR002912 ACT domain Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 Pfam PF00742 Homoserine dehydrogenase 615 811 1.8E-47 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 Gene3D G3DSA:3.40.50.720 466 812 9.9E-118 T 11-10-2018 Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 SUPERFAMILY SSF55347 615 798 1.37E-49 T 11-10-2018 Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 2.8E-123 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 PIRSF PIRSF000727 1 818 0.0 T 11-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Patl_3580 c43d7216f20995ff11118d9ced3fefa3 820 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 661 683 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Patl_2924 62fc69cb1951cab7c179b43f30f2143b 131 SUPERFAMILY SSF46955 6 121 5.49E-26 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Patl_2924 62fc69cb1951cab7c179b43f30f2143b 131 Gene3D G3DSA:1.10.1660.10 1 127 3.5E-28 T 11-10-2018 Patl_2924 62fc69cb1951cab7c179b43f30f2143b 131 SMART SM00422 6 73 9.4E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2924 62fc69cb1951cab7c179b43f30f2143b 131 Pfam PF13411 MerR HTH family regulatory protein 6 71 1.7E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2924 62fc69cb1951cab7c179b43f30f2143b 131 ProSitePatterns PS00552 MerR-type HTH domain signature. 9 31 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_4051 da73e128e803f2ad57792c630862073a 345 Gene3D G3DSA:1.20.120.1460 253 328 4.0E-24 T 11-10-2018 Patl_4051 da73e128e803f2ad57792c630862073a 345 SUPERFAMILY SSF51395 12 306 4.95E-74 T 11-10-2018 Patl_4051 da73e128e803f2ad57792c630862073a 345 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Patl_4051 da73e128e803f2ad57792c630862073a 345 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 6 331 51.353 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 Patl_4051 da73e128e803f2ad57792c630862073a 345 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 11 330 5.4E-141 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 Patl_4051 da73e128e803f2ad57792c630862073a 345 Pfam PF01207 Dihydrouridine synthase (Dus) 14 311 4.3E-86 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Patl_4051 da73e128e803f2ad57792c630862073a 345 Gene3D G3DSA:3.20.20.70 8 249 2.2E-72 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_3039 b4df3c55eddcdc2b194db022eff40bea 131 Gene3D G3DSA:2.30.330.10 37 131 9.5E-34 T 11-10-2018 IPR036429 SpoA-like superfamily Patl_3039 b4df3c55eddcdc2b194db022eff40bea 131 PRINTS PR00956 Flagellar motor switch protein FliN signature 97 112 3.3E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Patl_3039 b4df3c55eddcdc2b194db022eff40bea 131 PRINTS PR00956 Flagellar motor switch protein FliN signature 51 67 3.3E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Patl_3039 b4df3c55eddcdc2b194db022eff40bea 131 PRINTS PR00956 Flagellar motor switch protein FliN signature 68 84 3.3E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Patl_3039 b4df3c55eddcdc2b194db022eff40bea 131 PRINTS PR00956 Flagellar motor switch protein FliN signature 84 97 3.3E-28 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Patl_3039 b4df3c55eddcdc2b194db022eff40bea 131 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 51 121 8.4E-25 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) Patl_3039 b4df3c55eddcdc2b194db022eff40bea 131 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 49 123 4.0E-33 T 11-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 Patl_3039 b4df3c55eddcdc2b194db022eff40bea 131 SUPERFAMILY SSF101801 48 129 2.49E-24 T 11-10-2018 IPR036429 SpoA-like superfamily Patl_0104 1b22cc322302d9b3a1cede88d696c50b 328 Gene3D G3DSA:3.40.50.880 2 205 2.2E-44 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_0104 1b22cc322302d9b3a1cede88d696c50b 328 Pfam PF12833 Helix-turn-helix domain 239 318 2.7E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_0104 1b22cc322302d9b3a1cede88d696c50b 328 Pfam PF01965 DJ-1/PfpI family 7 178 1.7E-8 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Patl_0104 1b22cc322302d9b3a1cede88d696c50b 328 SMART SM00342 233 316 5.3E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_0104 1b22cc322302d9b3a1cede88d696c50b 328 SUPERFAMILY SSF46689 269 320 6.27E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0104 1b22cc322302d9b3a1cede88d696c50b 328 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 270 312 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Patl_0104 1b22cc322302d9b3a1cede88d696c50b 328 Gene3D G3DSA:1.10.10.60 211 266 3.0E-10 T 11-10-2018 Patl_0104 1b22cc322302d9b3a1cede88d696c50b 328 SUPERFAMILY SSF52317 7 197 1.58E-31 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_0104 1b22cc322302d9b3a1cede88d696c50b 328 Gene3D G3DSA:1.10.10.60 267 323 1.8E-16 T 11-10-2018 Patl_0104 1b22cc322302d9b3a1cede88d696c50b 328 SUPERFAMILY SSF46689 216 267 1.2E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_3996 b8630facd513cfab05843072be1165e8 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.7E-59 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_3996 b8630facd513cfab05843072be1165e8 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 4.6E-15 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Patl_3996 b8630facd513cfab05843072be1165e8 394 SUPERFAMILY SSF50447 203 301 1.22E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Patl_3996 b8630facd513cfab05843072be1165e8 394 SUPERFAMILY SSF52540 6 219 4.98E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3996 b8630facd513cfab05843072be1165e8 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.288 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Patl_3996 b8630facd513cfab05843072be1165e8 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 6.0E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Patl_3996 b8630facd513cfab05843072be1165e8 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.7E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Patl_3996 b8630facd513cfab05843072be1165e8 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 9.0E-234 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Patl_3996 b8630facd513cfab05843072be1165e8 394 SUPERFAMILY SSF50465 298 393 2.07E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Patl_3996 b8630facd513cfab05843072be1165e8 394 Gene3D G3DSA:2.40.30.10 338 393 7.8E-29 T 11-10-2018 Patl_3996 b8630facd513cfab05843072be1165e8 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Patl_3996 b8630facd513cfab05843072be1165e8 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.9E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_3996 b8630facd513cfab05843072be1165e8 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 9.9E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_3996 b8630facd513cfab05843072be1165e8 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 9.9E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_3996 b8630facd513cfab05843072be1165e8 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 9.9E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_3996 b8630facd513cfab05843072be1165e8 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 9.9E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_3996 b8630facd513cfab05843072be1165e8 394 Gene3D G3DSA:2.40.30.10 206 334 1.6E-52 T 11-10-2018 Patl_3996 b8630facd513cfab05843072be1165e8 394 Gene3D G3DSA:3.40.50.300 1 203 2.7E-71 T 11-10-2018 Patl_0603 b8630facd513cfab05843072be1165e8 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.7E-59 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0603 b8630facd513cfab05843072be1165e8 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 4.6E-15 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Patl_0603 b8630facd513cfab05843072be1165e8 394 SUPERFAMILY SSF50447 203 301 1.22E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Patl_0603 b8630facd513cfab05843072be1165e8 394 SUPERFAMILY SSF52540 6 219 4.98E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0603 b8630facd513cfab05843072be1165e8 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.288 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Patl_0603 b8630facd513cfab05843072be1165e8 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 6.0E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Patl_0603 b8630facd513cfab05843072be1165e8 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.7E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Patl_0603 b8630facd513cfab05843072be1165e8 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 9.0E-234 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Patl_0603 b8630facd513cfab05843072be1165e8 394 SUPERFAMILY SSF50465 298 393 2.07E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Patl_0603 b8630facd513cfab05843072be1165e8 394 Gene3D G3DSA:2.40.30.10 338 393 7.8E-29 T 11-10-2018 Patl_0603 b8630facd513cfab05843072be1165e8 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Patl_0603 b8630facd513cfab05843072be1165e8 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.9E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0603 b8630facd513cfab05843072be1165e8 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 9.9E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0603 b8630facd513cfab05843072be1165e8 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 9.9E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0603 b8630facd513cfab05843072be1165e8 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 9.9E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0603 b8630facd513cfab05843072be1165e8 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 9.9E-25 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0603 b8630facd513cfab05843072be1165e8 394 Gene3D G3DSA:2.40.30.10 206 334 1.6E-52 T 11-10-2018 Patl_0603 b8630facd513cfab05843072be1165e8 394 Gene3D G3DSA:3.40.50.300 1 203 2.7E-71 T 11-10-2018 Patl_4164 f7e21c6201c31dcca19ae8d419a1b817 282 SUPERFAMILY SSF46689 1 74 5.2E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_4164 f7e21c6201c31dcca19ae8d419a1b817 282 Pfam PF01380 SIS domain 126 256 1.0E-22 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Patl_4164 f7e21c6201c31dcca19ae8d419a1b817 282 Gene3D G3DSA:1.10.10.10 1 81 2.0E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_4164 f7e21c6201c31dcca19ae8d419a1b817 282 Gene3D G3DSA:3.40.50.10490 95 280 1.2E-43 T 11-10-2018 Patl_4164 f7e21c6201c31dcca19ae8d419a1b817 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 75 1.2E-19 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Patl_4164 f7e21c6201c31dcca19ae8d419a1b817 282 SUPERFAMILY SSF53697 98 268 1.96E-37 T 11-10-2018 Patl_3778 d3c524850d0d017082863507c056c362 329 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 272 314 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Patl_3778 d3c524850d0d017082863507c056c362 329 Gene3D G3DSA:1.10.10.2730 273 318 1.8E-14 T 11-10-2018 Patl_3778 d3c524850d0d017082863507c056c362 329 Pfam PF01965 DJ-1/PfpI family 2 180 1.3E-14 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Patl_3778 d3c524850d0d017082863507c056c362 329 SUPERFAMILY SSF52317 1 200 1.71E-35 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_3778 d3c524850d0d017082863507c056c362 329 Gene3D G3DSA:3.40.50.880 1 209 5.6E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_3778 d3c524850d0d017082863507c056c362 329 SUPERFAMILY SSF46689 219 269 5.38E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_3778 d3c524850d0d017082863507c056c362 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 287 302 9.9E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Patl_3778 d3c524850d0d017082863507c056c362 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 302 318 9.9E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Patl_3778 d3c524850d0d017082863507c056c362 329 Gene3D G3DSA:1.10.10.60 219 272 9.2E-11 T 11-10-2018 Patl_3778 d3c524850d0d017082863507c056c362 329 SUPERFAMILY SSF46689 271 322 4.93E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_3778 d3c524850d0d017082863507c056c362 329 SMART SM00342 235 318 3.9E-30 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_3778 d3c524850d0d017082863507c056c362 329 Pfam PF12833 Helix-turn-helix domain 242 319 5.1E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_3608 8cfd5e24c9f92347d4d1fa0c1368ad8a 314 Pfam PF05661 Protein of unknown function (DUF808) 5 299 5.7E-111 T 11-10-2018 IPR008526 Inner membrane protein YedI Patl_3608 8cfd5e24c9f92347d4d1fa0c1368ad8a 314 PIRSF PIRSF016660 1 312 4.8E-123 T 11-10-2018 IPR008526 Inner membrane protein YedI Patl_1002 d884897f6effbc95e3cb2cd4e65fe457 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 2.7E-26 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1002 d884897f6effbc95e3cb2cd4e65fe457 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1002 d884897f6effbc95e3cb2cd4e65fe457 101 SUPERFAMILY SSF57716 2 101 2.85E-38 T 11-10-2018 Patl_1002 d884897f6effbc95e3cb2cd4e65fe457 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.486 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid Patl_1002 d884897f6effbc95e3cb2cd4e65fe457 101 Gene3D G3DSA:4.10.830.10 41 101 2.4E-23 T 11-10-2018 Patl_1443 8088d47642e5e235b901187d07d2e39f 743 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 57 743 5.1E-93 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 Patl_1443 8088d47642e5e235b901187d07d2e39f 743 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 149 2.5E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1443 8088d47642e5e235b901187d07d2e39f 743 Gene3D G3DSA:2.40.170.20 341 743 1.0E-85 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_1443 8088d47642e5e235b901187d07d2e39f 743 Pfam PF00593 TonB dependent receptor 224 741 1.7E-48 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1443 8088d47642e5e235b901187d07d2e39f 743 Gene3D G3DSA:2.170.130.10 36 159 1.0E-28 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_1443 8088d47642e5e235b901187d07d2e39f 743 SUPERFAMILY SSF56935 18 743 1.67E-117 T 11-10-2018 Patl_1443 8088d47642e5e235b901187d07d2e39f 743 Gene3D G3DSA:2.40.170.20 160 333 1.5E-17 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_2883 703053064b8c630f9574959645b5d566 358 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 5 358 49.871 T 11-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 Patl_2883 703053064b8c630f9574959645b5d566 358 SUPERFAMILY SSF54211 170 254 3.92E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_2883 703053064b8c630f9574959645b5d566 358 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 6 165 1.7E-74 T 11-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 Patl_2883 703053064b8c630f9574959645b5d566 358 SUPERFAMILY SSF54211 255 345 8.09E-28 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_2883 703053064b8c630f9574959645b5d566 358 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 229 242 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Patl_2883 703053064b8c630f9574959645b5d566 358 SUPERFAMILY SSF56784 7 160 4.07E-38 T 11-10-2018 IPR036412 HAD-like superfamily Patl_2883 703053064b8c630f9574959645b5d566 358 Gene3D G3DSA:3.40.50.1000 2 165 1.5E-45 T 11-10-2018 IPR023214 HAD superfamily Patl_2883 703053064b8c630f9574959645b5d566 358 Pfam PF13242 HAD-hyrolase-like 106 149 4.3E-7 T 11-10-2018 Patl_2883 703053064b8c630f9574959645b5d566 358 Gene3D G3DSA:3.30.230.40 166 257 4.6E-37 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Patl_2883 703053064b8c630f9574959645b5d566 358 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 170 358 36.296 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Patl_2883 703053064b8c630f9574959645b5d566 358 Gene3D G3DSA:3.30.230.40 258 358 4.9E-33 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Patl_2883 703053064b8c630f9574959645b5d566 358 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 199 340 2.3E-63 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Patl_2883 703053064b8c630f9574959645b5d566 358 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 8 152 3.6E-25 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Patl_2883 703053064b8c630f9574959645b5d566 358 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 8 148 6.1E-44 T 11-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 Patl_3021 2382c987d11f0bdc20c1090825cb371b 308 SUPERFAMILY SSF52317 17 297 1.22E-101 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_3021 2382c987d11f0bdc20c1090825cb371b 308 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 1.1E-130 T 11-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 Patl_3021 2382c987d11f0bdc20c1090825cb371b 308 Gene3D G3DSA:3.40.50.880 1 301 1.7E-124 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_3021 2382c987d11f0bdc20c1090825cb371b 308 PIRSF PIRSF000450 1 308 5.1E-137 T 11-10-2018 IPR033752 MetA family Patl_3021 2382c987d11f0bdc20c1090825cb371b 308 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.411 T 11-10-2018 IPR033752 MetA family Patl_3021 2382c987d11f0bdc20c1090825cb371b 308 Pfam PF04204 Homoserine O-succinyltransferase 2 299 4.0E-134 T 11-10-2018 IPR033752 MetA family Patl_3021 2382c987d11f0bdc20c1090825cb371b 308 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 5.0E-151 T 11-10-2018 Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 Pfam PF04545 Sigma-70, region 4 184 232 1.1E-17 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 Gene3D G3DSA:1.20.140.160 88 237 6.1E-42 T 11-10-2018 Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 17 236 2.9E-81 T 11-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 PIRSF PIRSF000770 3 241 1.9E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 SUPERFAMILY SSF88659 91 155 9.16E-11 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 Pfam PF04542 Sigma-70 region 2 17 89 6.1E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 PRINTS PR00046 Major sigma-70 factor signature 44 57 2.2E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 PRINTS PR00046 Major sigma-70 factor signature 220 231 2.2E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 PRINTS PR00046 Major sigma-70 factor signature 188 200 2.2E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 PRINTS PR00046 Major sigma-70 factor signature 205 220 2.2E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 Gene3D G3DSA:1.10.1740.10 2 86 3.8E-29 T 11-10-2018 Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 235 4.1E-32 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 SUPERFAMILY SSF88659 161 239 1.21E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 SUPERFAMILY SSF88946 9 89 1.24E-24 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 6 238 62.603 T 11-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Patl_3030 94e33af4d64353725a7dda81547bb9d1 242 Pfam PF04539 Sigma-70 region 3 98 141 1.9E-6 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Patl_2446 926449da6511b1cfe7ef38fd7835be16 154 PIRSF PIRSF028288 1 154 5.2E-45 T 11-10-2018 IPR016878 Uncharacterised conserved protein UCP028288 Patl_2446 926449da6511b1cfe7ef38fd7835be16 154 Gene3D G3DSA:3.10.450.50 3 154 4.9E-14 T 11-10-2018 Patl_3592 56f884b50dc704f67eb3bc899e459cef 359 Gene3D G3DSA:3.30.1360.120 7 231 1.7E-87 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Patl_3592 56f884b50dc704f67eb3bc899e459cef 359 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 354 1.6E-143 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Patl_3592 56f884b50dc704f67eb3bc899e459cef 359 PIRSF PIRSF006487 1 358 7.0E-84 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Patl_3592 56f884b50dc704f67eb3bc899e459cef 359 SUPERFAMILY SSF101790 273 356 8.83E-23 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Patl_3592 56f884b50dc704f67eb3bc899e459cef 359 SUPERFAMILY SSF103025 4 278 5.81E-90 T 11-10-2018 Patl_3592 56f884b50dc704f67eb3bc899e459cef 359 Gene3D G3DSA:2.40.30.110 277 359 3.8E-32 T 11-10-2018 Patl_3592 56f884b50dc704f67eb3bc899e459cef 359 Gene3D G3DSA:4.10.1250.10 232 275 5.2E-27 T 11-10-2018 Patl_3592 56f884b50dc704f67eb3bc899e459cef 359 Gene3D G3DSA:3.30.70.1400 51 138 1.7E-87 T 11-10-2018 Patl_3592 56f884b50dc704f67eb3bc899e459cef 359 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 348 2.8E-19 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Patl_3592 56f884b50dc704f67eb3bc899e459cef 359 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 7.9E-88 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Patl_3592 56f884b50dc704f67eb3bc899e459cef 359 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 354 43.703 T 11-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Patl_4285 7ec6809dc5aa793d890d0e379b232bff 388 SUPERFAMILY SSF109604 137 307 4.4E-34 T 11-10-2018 Patl_4285 7ec6809dc5aa793d890d0e379b232bff 388 SMART SM00471 142 277 2.1E-10 T 11-10-2018 IPR003607 HD/PDEase domain Patl_4285 7ec6809dc5aa793d890d0e379b232bff 388 TIGRFAM TIGR00277 HDIG: HDIG domain 146 236 2.5E-12 T 11-10-2018 IPR006675 HDIG domain Patl_4285 7ec6809dc5aa793d890d0e379b232bff 388 Pfam PF11871 Domain of unknown function (DUF3391) 2 112 5.4E-13 T 11-10-2018 IPR021812 Protein of unknown function DUF3391 Patl_4285 7ec6809dc5aa793d890d0e379b232bff 388 Pfam PF01966 HD domain 147 267 9.5E-19 T 11-10-2018 IPR006674 HD domain Patl_4285 7ec6809dc5aa793d890d0e379b232bff 388 Gene3D G3DSA:1.10.3210.10 3 309 1.7E-71 T 11-10-2018 Patl_2162 cb318353ead5dfa600e2fd14a67ef8c5 274 Gene3D G3DSA:3.40.50.1000 6 262 1.3E-75 T 11-10-2018 IPR023214 HAD superfamily Patl_2162 cb318353ead5dfa600e2fd14a67ef8c5 274 SUPERFAMILY SSF56784 4 235 3.33E-37 T 11-10-2018 IPR036412 HAD-like superfamily Patl_2162 cb318353ead5dfa600e2fd14a67ef8c5 274 Gene3D G3DSA:3.30.980.20 99 187 1.3E-75 T 11-10-2018 Patl_2162 cb318353ead5dfa600e2fd14a67ef8c5 274 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 6 269 6.2E-58 T 11-10-2018 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 Patl_2162 cb318353ead5dfa600e2fd14a67ef8c5 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 74 5.2E-8 T 11-10-2018 Patl_2162 cb318353ead5dfa600e2fd14a67ef8c5 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 234 1.4E-19 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Patl_1328 895b49bb9a7527fdb01ca080f29bdf5e 423 Pfam PF01593 Flavin containing amine oxidoreductase 12 308 1.8E-16 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Patl_1328 895b49bb9a7527fdb01ca080f29bdf5e 423 SUPERFAMILY SSF51905 3 417 4.73E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1328 895b49bb9a7527fdb01ca080f29bdf5e 423 Gene3D G3DSA:3.50.50.60 1 113 3.5E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1328 895b49bb9a7527fdb01ca080f29bdf5e 423 Gene3D G3DSA:3.50.50.60 172 293 8.8E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1598 a48e1ddbd64d179cd5d03a347e9b3f37 348 SUPERFAMILY SSF50331 262 347 3.74E-9 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Patl_1598 a48e1ddbd64d179cd5d03a347e9b3f37 348 Gene3D G3DSA:2.40.50.140 282 338 1.0E-5 T 11-10-2018 Patl_1598 a48e1ddbd64d179cd5d03a347e9b3f37 348 SMART SM00382 26 211 1.9E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1598 a48e1ddbd64d179cd5d03a347e9b3f37 348 SUPERFAMILY SSF52540 1 242 1.2E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1598 a48e1ddbd64d179cd5d03a347e9b3f37 348 Gene3D G3DSA:2.40.50.940 223 347 1.0E-5 T 11-10-2018 Patl_1598 a48e1ddbd64d179cd5d03a347e9b3f37 348 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_1598 a48e1ddbd64d179cd5d03a347e9b3f37 348 Gene3D G3DSA:3.40.50.300 1 222 5.4E-63 T 11-10-2018 Patl_1598 a48e1ddbd64d179cd5d03a347e9b3f37 348 Pfam PF00005 ABC transporter 18 161 8.7E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1598 a48e1ddbd64d179cd5d03a347e9b3f37 348 Pfam PF08402 TOBE domain 275 346 6.8E-5 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Patl_3024 d0167d9689e568ee0fdd43770d13349e 287 SMART SM00260 140 275 5.4E-5 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Patl_3024 d0167d9689e568ee0fdd43770d13349e 287 Gene3D G3DSA:2.40.50.180 161 274 3.2E-8 T 11-10-2018 Patl_3024 d0167d9689e568ee0fdd43770d13349e 287 Gene3D G3DSA:2.30.30.40 146 269 3.2E-8 T 11-10-2018 Patl_3024 d0167d9689e568ee0fdd43770d13349e 287 Pfam PF01584 CheW-like domain 144 276 3.8E-14 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Patl_3024 d0167d9689e568ee0fdd43770d13349e 287 SUPERFAMILY SSF50341 141 277 1.83E-16 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Patl_3024 d0167d9689e568ee0fdd43770d13349e 287 PIRSF PIRSF020479 9 287 1.6E-68 T 11-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like Patl_0440 f4225fc80ab5a1c28b67803f33d1795c 341 PIRSF PIRSF004911 4 340 1.9E-110 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Patl_0440 f4225fc80ab5a1c28b67803f33d1795c 341 TIGRFAM TIGR00238 TIGR00238: KamA family protein 9 328 5.3E-105 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Patl_0440 f4225fc80ab5a1c28b67803f33d1795c 341 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 1.1E-146 T 11-10-2018 IPR022462 Lysine-2,3-aminomutase-like Patl_0440 f4225fc80ab5a1c28b67803f33d1795c 341 SUPERFAMILY SSF102114 103 328 4.84E-27 T 11-10-2018 Patl_0440 f4225fc80ab5a1c28b67803f33d1795c 341 Pfam PF13394 4Fe-4S single cluster domain 117 196 2.5E-7 T 11-10-2018 Patl_0440 f4225fc80ab5a1c28b67803f33d1795c 341 Pfam PF04055 Radical SAM superfamily 119 248 1.9E-9 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Patl_0440 f4225fc80ab5a1c28b67803f33d1795c 341 Gene3D G3DSA:3.20.20.70 51 334 6.8E-86 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_1533 80303a9fd701347b84dbd4aa3de34d2b 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 440 1.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1533 80303a9fd701347b84dbd4aa3de34d2b 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 475 1.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1533 80303a9fd701347b84dbd4aa3de34d2b 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 494 1.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1533 80303a9fd701347b84dbd4aa3de34d2b 497 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 454 1.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1533 80303a9fd701347b84dbd4aa3de34d2b 497 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 390 496 2.0E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1533 80303a9fd701347b84dbd4aa3de34d2b 497 Gene3D G3DSA:3.30.565.10 350 497 2.6E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1533 80303a9fd701347b84dbd4aa3de34d2b 497 SUPERFAMILY SSF47384 233 343 9.81E-8 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_1533 80303a9fd701347b84dbd4aa3de34d2b 497 SMART SM00388 247 348 3.5E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1533 80303a9fd701347b84dbd4aa3de34d2b 497 SMART SM00387 389 497 3.1E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1533 80303a9fd701347b84dbd4aa3de34d2b 497 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 346 1.5E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1533 80303a9fd701347b84dbd4aa3de34d2b 497 SUPERFAMILY SSF55874 338 495 1.96E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3958 b4ece2b935a7057f0d61f06c5132ef29 108 Gene3D G3DSA:1.10.760.10 26 104 7.1E-29 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_3958 b4ece2b935a7057f0d61f06c5132ef29 108 Pfam PF00034 Cytochrome c 35 103 2.2E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_3958 b4ece2b935a7057f0d61f06c5132ef29 108 SUPERFAMILY SSF46626 25 103 5.59E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_3650 a36d4de97de544258e01dd10b2a6dc61 1012 SUPERFAMILY SSF56935 23 1012 8.06E-75 T 11-10-2018 Patl_3650 a36d4de97de544258e01dd10b2a6dc61 1012 Pfam PF00593 TonB dependent receptor 440 1011 2.5E-29 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3650 a36d4de97de544258e01dd10b2a6dc61 1012 Gene3D G3DSA:2.170.130.10 40 162 5.6E-12 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_3650 a36d4de97de544258e01dd10b2a6dc61 1012 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 38 1012 1.4E-147 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor Patl_3650 a36d4de97de544258e01dd10b2a6dc61 1012 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 159 2.2E-10 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_2209 a50983d1080a36bd34654bbe2d0952d8 286 SMART SM01091 205 283 9.1E-25 T 11-10-2018 IPR005170 Transporter-associated domain Patl_2209 a50983d1080a36bd34654bbe2d0952d8 286 SUPERFAMILY SSF54631 54 190 1.23E-34 T 11-10-2018 Patl_2209 a50983d1080a36bd34654bbe2d0952d8 286 SUPERFAMILY SSF56176 203 281 1.06E-20 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Patl_2209 a50983d1080a36bd34654bbe2d0952d8 286 Pfam PF00571 CBS domain 138 187 5.1E-6 T 11-10-2018 IPR000644 CBS domain Patl_2209 a50983d1080a36bd34654bbe2d0952d8 286 Pfam PF00571 CBS domain 67 123 1.5E-7 T 11-10-2018 IPR000644 CBS domain Patl_2209 a50983d1080a36bd34654bbe2d0952d8 286 Gene3D G3DSA:3.10.580.10 46 194 1.2E-53 T 11-10-2018 Patl_2209 a50983d1080a36bd34654bbe2d0952d8 286 SMART SM00116 139 187 0.03 T 11-10-2018 IPR000644 CBS domain Patl_2209 a50983d1080a36bd34654bbe2d0952d8 286 SMART SM00116 76 125 0.68 T 11-10-2018 IPR000644 CBS domain Patl_2209 a50983d1080a36bd34654bbe2d0952d8 286 Pfam PF03471 Transporter associated domain 207 281 1.5E-18 T 11-10-2018 IPR005170 Transporter-associated domain Patl_2209 a50983d1080a36bd34654bbe2d0952d8 286 Gene3D G3DSA:3.30.465.10 195 281 2.5E-27 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 Pfam PF13365 Trypsin-like peptidase domain 92 229 4.4E-33 T 11-10-2018 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 454 6.9E-152 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 SUPERFAMILY SSF50156 250 359 5.46E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 Pfam PF13180 PDZ domain 270 359 1.3E-16 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 Gene3D G3DSA:2.30.42.10 266 370 3.4E-28 T 11-10-2018 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 Gene3D G3DSA:2.30.42.10 371 456 1.3E-19 T 11-10-2018 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 SUPERFAMILY SSF50494 25 278 4.88E-65 T 11-10-2018 IPR009003 Peptidase S1, PA clan Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 3.3E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 3.3E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 3.3E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 PRINTS PR00834 HtrA/DegQ protease family signature 165 189 3.3E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 3.3E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 3.3E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 376 444 1.8E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 SMART SM00228 268 350 3.1E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 SMART SM00228 375 448 1.3E-4 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 Gene3D G3DSA:2.40.10.120 39 262 4.1E-84 T 11-10-2018 Patl_0553 047925690eb98b4e8c1dc5cb9de9bf42 456 SUPERFAMILY SSF50156 387 448 1.71E-11 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Patl_0009 b5d7d14fb103fccc10146380540ca0ed 301 Gene3D G3DSA:3.30.930.10 1 214 8.8E-111 T 11-10-2018 Patl_0009 b5d7d14fb103fccc10146380540ca0ed 301 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 290 1.2E-151 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_0009 b5d7d14fb103fccc10146380540ca0ed 301 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 299 2.4E-171 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_0009 b5d7d14fb103fccc10146380540ca0ed 301 SUPERFAMILY SSF55681 8 290 2.38E-137 T 11-10-2018 Patl_0009 b5d7d14fb103fccc10146380540ca0ed 301 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 291 61.264 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_0009 b5d7d14fb103fccc10146380540ca0ed 301 Gene3D G3DSA:1.20.58.180 215 295 1.9E-36 T 11-10-2018 Patl_0009 b5d7d14fb103fccc10146380540ca0ed 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.4E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_0009 b5d7d14fb103fccc10146380540ca0ed 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.4E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_0009 b5d7d14fb103fccc10146380540ca0ed 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.4E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_0009 b5d7d14fb103fccc10146380540ca0ed 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.4E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_0009 b5d7d14fb103fccc10146380540ca0ed 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.4E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_0009 b5d7d14fb103fccc10146380540ca0ed 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 251 267 2.4E-69 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_1544 47f829dfae8c5a2409cec7dd986bb319 349 Gene3D G3DSA:3.40.50.40 222 349 9.7E-46 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 Patl_1544 47f829dfae8c5a2409cec7dd986bb319 349 PRINTS PR00139 Asparaginase/glutaminase family signature 273 291 2.1E-15 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Patl_1544 47f829dfae8c5a2409cec7dd986bb319 349 PRINTS PR00139 Asparaginase/glutaminase family signature 19 30 2.1E-15 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Patl_1544 47f829dfae8c5a2409cec7dd986bb319 349 PRINTS PR00139 Asparaginase/glutaminase family signature 96 114 2.1E-15 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Patl_1544 47f829dfae8c5a2409cec7dd986bb319 349 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 21 29 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 Patl_1544 47f829dfae8c5a2409cec7dd986bb319 349 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 97 107 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 Patl_1544 47f829dfae8c5a2409cec7dd986bb319 349 Gene3D G3DSA:3.40.50.1170 12 221 3.1E-87 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 Patl_1544 47f829dfae8c5a2409cec7dd986bb319 349 SUPERFAMILY SSF53774 16 348 1.44E-109 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 Patl_1544 47f829dfae8c5a2409cec7dd986bb319 349 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 16 348 4.4E-111 T 11-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 Patl_1544 47f829dfae8c5a2409cec7dd986bb319 349 PIRSF PIRSF500176 15 345 7.9E-107 T 11-10-2018 Patl_1544 47f829dfae8c5a2409cec7dd986bb319 349 PIRSF PIRSF001220 14 347 1.6E-89 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Patl_1544 47f829dfae8c5a2409cec7dd986bb319 349 Pfam PF00710 Asparaginase, N-terminal 18 203 3.4E-65 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 Patl_1544 47f829dfae8c5a2409cec7dd986bb319 349 SMART SM00870 18 336 1.7E-136 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 Patl_1603 f5ffc7d835100ef49704253f4444518e 449 Gene3D G3DSA:1.10.8.60 311 389 1.3E-21 T 11-10-2018 Patl_1603 f5ffc7d835100ef49704253f4444518e 449 SUPERFAMILY SSF52540 140 384 1.1E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1603 f5ffc7d835100ef49704253f4444518e 449 Pfam PF00158 Sigma-54 interaction domain 140 306 2.5E-72 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Patl_1603 f5ffc7d835100ef49704253f4444518e 449 SUPERFAMILY SSF46689 391 441 1.02E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1603 f5ffc7d835100ef49704253f4444518e 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Patl_1603 f5ffc7d835100ef49704253f4444518e 449 Gene3D G3DSA:3.40.50.300 131 310 3.2E-65 T 11-10-2018 Patl_1603 f5ffc7d835100ef49704253f4444518e 449 Gene3D G3DSA:1.10.10.60 390 443 4.7E-13 T 11-10-2018 Patl_1603 f5ffc7d835100ef49704253f4444518e 449 SUPERFAMILY SSF52172 10 184 5.69E-43 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1603 f5ffc7d835100ef49704253f4444518e 449 SMART SM00448 10 121 5.2E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1603 f5ffc7d835100ef49704253f4444518e 449 SMART SM00382 160 303 7.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1603 f5ffc7d835100ef49704253f4444518e 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Patl_1603 f5ffc7d835100ef49704253f4444518e 449 Pfam PF00072 Response regulator receiver domain 12 121 1.3E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1603 f5ffc7d835100ef49704253f4444518e 449 Gene3D G3DSA:3.40.50.2300 6 130 1.3E-34 T 11-10-2018 Patl_0349 c86bf5535279ff6138211e13f0eae745 709 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 696 7.3E-248 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 Patl_0349 c86bf5535279ff6138211e13f0eae745 709 Pfam PF13328 HD domain 26 175 3.7E-53 T 11-10-2018 IPR003607 HD/PDEase domain Patl_0349 c86bf5535279ff6138211e13f0eae745 709 SMART SM00954 235 345 5.1E-60 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 Patl_0349 c86bf5535279ff6138211e13f0eae745 709 SUPERFAMILY SSF109604 4 190 3.3E-72 T 11-10-2018 Patl_0349 c86bf5535279ff6138211e13f0eae745 709 Pfam PF02824 TGS domain 389 448 1.7E-18 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Patl_0349 c86bf5535279ff6138211e13f0eae745 709 SUPERFAMILY SSF81271 376 449 5.45E-19 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Patl_0349 c86bf5535279ff6138211e13f0eae745 709 Gene3D G3DSA:1.10.3210.10 3 190 2.0E-78 T 11-10-2018 Patl_0349 c86bf5535279ff6138211e13f0eae745 709 Pfam PF04607 Region found in RelA / SpoT proteins 235 344 1.5E-34 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 Patl_0349 c86bf5535279ff6138211e13f0eae745 709 Pfam PF13291 ACT domain 620 697 1.4E-15 T 11-10-2018 IPR002912 ACT domain Patl_0349 c86bf5535279ff6138211e13f0eae745 709 Gene3D G3DSA:3.30.460.10 193 325 5.3E-45 T 11-10-2018 Patl_0349 c86bf5535279ff6138211e13f0eae745 709 Gene3D G3DSA:3.30.70.260 621 707 3.3E-13 T 11-10-2018 Patl_0349 c86bf5535279ff6138211e13f0eae745 709 SUPERFAMILY SSF81301 181 393 8.5E-59 T 11-10-2018 Patl_0349 c86bf5535279ff6138211e13f0eae745 709 Gene3D G3DSA:3.10.20.30 382 457 1.0E-27 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_0349 c86bf5535279ff6138211e13f0eae745 709 SMART SM00471 41 153 2.6E-11 T 11-10-2018 IPR003607 HD/PDEase domain Patl_0349 c86bf5535279ff6138211e13f0eae745 709 SUPERFAMILY SSF55021 623 699 9.58E-8 T 11-10-2018 Patl_3881 0c570cdb9dbef1436cf918d7feb2500d 610 Gene3D G3DSA:3.40.50.10490 250 609 2.1E-148 T 11-10-2018 Patl_3881 0c570cdb9dbef1436cf918d7feb2500d 610 Gene3D G3DSA:3.40.50.10490 448 595 2.1E-148 T 11-10-2018 Patl_3881 0c570cdb9dbef1436cf918d7feb2500d 610 Pfam PF13522 Glutamine amidotransferase domain 66 181 4.8E-21 T 11-10-2018 Patl_3881 0c570cdb9dbef1436cf918d7feb2500d 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 2.7E-260 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Patl_3881 0c570cdb9dbef1436cf918d7feb2500d 610 SUPERFAMILY SSF53697 246 610 1.02E-111 T 11-10-2018 Patl_3881 0c570cdb9dbef1436cf918d7feb2500d 610 SUPERFAMILY SSF56235 2 235 4.55E-76 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_3881 0c570cdb9dbef1436cf918d7feb2500d 610 Pfam PF01380 SIS domain 463 592 4.1E-26 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Patl_3881 0c570cdb9dbef1436cf918d7feb2500d 610 Pfam PF01380 SIS domain 291 419 3.1E-32 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Patl_3881 0c570cdb9dbef1436cf918d7feb2500d 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.438 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Patl_3881 0c570cdb9dbef1436cf918d7feb2500d 610 Gene3D G3DSA:3.60.20.10 2 242 3.4E-81 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_3377 a8b41f4d543bf4923e0e7b2aed25a129 291 Gene3D G3DSA:3.30.479.10 12 153 9.0E-23 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 Patl_3377 a8b41f4d543bf4923e0e7b2aed25a129 291 SUPERFAMILY SSF55620 155 290 3.56E-21 T 11-10-2018 Patl_3377 a8b41f4d543bf4923e0e7b2aed25a129 291 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 24 131 1.7E-8 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 Patl_3377 a8b41f4d543bf4923e0e7b2aed25a129 291 SUPERFAMILY SSF55620 1 156 1.17E-30 T 11-10-2018 Patl_0770 3768bb42ab7ac3a5c268e3e83c2904a8 325 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 27 303 1.1E-64 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Patl_0770 3768bb42ab7ac3a5c268e3e83c2904a8 325 Gene3D G3DSA:3.40.190.170 22 323 2.5E-78 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Patl_0770 3768bb42ab7ac3a5c268e3e83c2904a8 325 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 27 268 4.8E-54 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Patl_3993 d17df7f4b1c9b027e5c182a13fe1576d 394 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 138 228 2.2E-18 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Patl_3993 d17df7f4b1c9b027e5c182a13fe1576d 394 Gene3D G3DSA:1.20.140.10 242 394 3.0E-39 T 11-10-2018 Patl_3993 d17df7f4b1c9b027e5c182a13fe1576d 394 Gene3D G3DSA:2.40.110.10 137 240 5.6E-36 T 11-10-2018 Patl_3993 d17df7f4b1c9b027e5c182a13fe1576d 394 SUPERFAMILY SSF47203 244 391 3.06E-40 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_3993 d17df7f4b1c9b027e5c182a13fe1576d 394 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 23 134 2.5E-29 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Patl_3993 d17df7f4b1c9b027e5c182a13fe1576d 394 SUPERFAMILY SSF56645 9 240 8.12E-72 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_3993 d17df7f4b1c9b027e5c182a13fe1576d 394 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 241 386 1.9E-28 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_3993 d17df7f4b1c9b027e5c182a13fe1576d 394 Gene3D G3DSA:1.10.540.10 4 136 1.2E-36 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Patl_3993 d17df7f4b1c9b027e5c182a13fe1576d 394 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 140 152 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Patl_2702 69fb3cdcf0ad1c7283b3a272b8b05937 460 SUPERFAMILY SSF56300 126 393 1.39E-23 T 11-10-2018 Patl_2702 69fb3cdcf0ad1c7283b3a272b8b05937 460 Pfam PF09423 PhoD-like phosphatase 154 380 4.2E-28 T 11-10-2018 IPR018946 Alkaline phosphatase D-related Patl_2702 69fb3cdcf0ad1c7283b3a272b8b05937 460 Gene3D G3DSA:3.60.21.70 145 453 1.1E-37 T 11-10-2018 IPR038607 PhoD-like superfamily Patl_0626 bcddbda652a11cda5fcd3561f62ec0a9 194 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 11-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Patl_0626 bcddbda652a11cda5fcd3561f62ec0a9 194 Gene3D G3DSA:3.30.60.20 143 187 8.7E-9 T 11-10-2018 Patl_0626 bcddbda652a11cda5fcd3561f62ec0a9 194 SUPERFAMILY SSF52540 1 141 2.71E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0626 bcddbda652a11cda5fcd3561f62ec0a9 194 PIRSF PIRSF035805 1 193 2.0E-56 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Patl_0626 bcddbda652a11cda5fcd3561f62ec0a9 194 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.442 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Patl_0626 bcddbda652a11cda5fcd3561f62ec0a9 194 Gene3D G3DSA:3.40.50.300 1 141 1.5E-26 T 11-10-2018 Patl_0626 bcddbda652a11cda5fcd3561f62ec0a9 194 Pfam PF00265 Thymidine kinase 2 186 1.7E-57 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 Patl_0626 bcddbda652a11cda5fcd3561f62ec0a9 194 SUPERFAMILY SSF57716 142 192 9.98E-17 T 11-10-2018 Patl_3411 e1a948c884df64af992ce1ceee6734fe 229 Pfam PF00072 Response regulator receiver domain 6 114 9.5E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3411 e1a948c884df64af992ce1ceee6734fe 229 Gene3D G3DSA:3.40.50.2300 1 121 1.5E-33 T 11-10-2018 Patl_3411 e1a948c884df64af992ce1ceee6734fe 229 SMART SM00448 4 114 1.6E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3411 e1a948c884df64af992ce1ceee6734fe 229 SUPERFAMILY SSF52172 1 188 1.42E-36 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3411 e1a948c884df64af992ce1ceee6734fe 229 SMART SM00862 152 228 4.2E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_3411 e1a948c884df64af992ce1ceee6734fe 229 Gene3D G3DSA:1.10.10.10 122 229 7.4E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3411 e1a948c884df64af992ce1ceee6734fe 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 228 2.9E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_1652 c22a3553ac5288928729cfd1f2e405ee 406 Pfam PF00563 EAL domain 49 191 1.1E-12 T 11-10-2018 IPR001633 EAL domain Patl_1652 c22a3553ac5288928729cfd1f2e405ee 406 Gene3D G3DSA:3.20.20.450 28 195 3.2E-16 T 11-10-2018 IPR035919 EAL domain superfamily Patl_1652 c22a3553ac5288928729cfd1f2e405ee 406 SUPERFAMILY SSF109604 182 400 6.91E-41 T 11-10-2018 Patl_1652 c22a3553ac5288928729cfd1f2e405ee 406 Gene3D G3DSA:1.10.3210.10 196 364 2.3E-23 T 11-10-2018 Patl_1652 c22a3553ac5288928729cfd1f2e405ee 406 PIRSF PIRSF003180 1 405 7.0E-127 T 11-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing Patl_1652 c22a3553ac5288928729cfd1f2e405ee 406 SUPERFAMILY SSF141868 3 196 4.05E-29 T 11-10-2018 IPR035919 EAL domain superfamily Patl_1652 c22a3553ac5288928729cfd1f2e405ee 406 SMART SM00052 2 196 0.0017 T 11-10-2018 IPR001633 EAL domain Patl_1652 c22a3553ac5288928729cfd1f2e405ee 406 Pfam PF08668 HDOD domain 205 321 7.0E-17 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Patl_3491 02a92230a406756af7fa64395d79733d 444 Gene3D G3DSA:3.30.2290.10 3 213 1.8E-12 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Patl_3491 02a92230a406756af7fa64395d79733d 444 SUPERFAMILY SSF111283 3 437 2.22E-81 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Patl_3491 02a92230a406756af7fa64395d79733d 444 Pfam PF01523 Putative modulator of DNA gyrase 24 317 7.9E-48 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Patl_0935 e490b15cd71575866752d38f0d6cedd2 961 Pfam PF07715 TonB-dependent Receptor Plug Domain 183 302 2.4E-23 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0935 e490b15cd71575866752d38f0d6cedd2 961 Gene3D G3DSA:3.55.50.30 46 128 6.3E-14 T 11-10-2018 Patl_0935 e490b15cd71575866752d38f0d6cedd2 961 SMART SM00965 70 121 9.7E-5 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Patl_0935 e490b15cd71575866752d38f0d6cedd2 961 SUPERFAMILY SSF56935 167 954 6.8E-95 T 11-10-2018 Patl_0935 e490b15cd71575866752d38f0d6cedd2 961 Gene3D G3DSA:2.170.130.10 163 306 2.0E-35 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_0935 e490b15cd71575866752d38f0d6cedd2 961 Pfam PF00593 TonB dependent receptor 470 948 3.6E-40 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0935 e490b15cd71575866752d38f0d6cedd2 961 Gene3D G3DSA:2.40.170.20 307 959 9.0E-42 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_0510 f8c33717be25038486d0a1449a4e0d19 554 Pfam PF00135 Carboxylesterase family 20 516 2.8E-115 T 11-10-2018 IPR002018 Carboxylesterase, type B Patl_0510 f8c33717be25038486d0a1449a4e0d19 554 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 197 212 - T 11-10-2018 IPR019826 Carboxylesterase type B, active site Patl_0510 f8c33717be25038486d0a1449a4e0d19 554 SUPERFAMILY SSF53474 21 506 4.87E-118 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0510 f8c33717be25038486d0a1449a4e0d19 554 Gene3D G3DSA:3.40.50.1820 6 537 7.9E-146 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3295 9612cf6783f00fd963fa65474165e26a 452 SUPERFAMILY SSF52172 2 187 4.7E-31 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3295 9612cf6783f00fd963fa65474165e26a 452 Gene3D G3DSA:3.40.50.300 132 312 2.5E-66 T 11-10-2018 Patl_3295 9612cf6783f00fd963fa65474165e26a 452 Pfam PF02954 Bacterial regulatory protein, Fis family 403 442 1.1E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_3295 9612cf6783f00fd963fa65474165e26a 452 Gene3D G3DSA:3.40.50.2300 1 131 3.7E-24 T 11-10-2018 Patl_3295 9612cf6783f00fd963fa65474165e26a 452 Gene3D G3DSA:1.10.10.60 391 447 5.2E-11 T 11-10-2018 Patl_3295 9612cf6783f00fd963fa65474165e26a 452 Gene3D G3DSA:1.10.8.60 313 380 8.8E-22 T 11-10-2018 Patl_3295 9612cf6783f00fd963fa65474165e26a 452 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Patl_3295 9612cf6783f00fd963fa65474165e26a 452 Pfam PF00072 Response regulator receiver domain 4 113 5.1E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3295 9612cf6783f00fd963fa65474165e26a 452 SMART SM00448 2 116 9.0E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3295 9612cf6783f00fd963fa65474165e26a 452 SUPERFAMILY SSF52540 142 383 2.55E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3295 9612cf6783f00fd963fa65474165e26a 452 SMART SM00382 162 305 8.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3295 9612cf6783f00fd963fa65474165e26a 452 TIGRFAM TIGR02915 PEP_resp_reg: PEP-CTERM-box response regulator transcription factor 4 445 1.1E-211 T 11-10-2018 IPR014264 Signal transduction response regulator, PEP-CTERM system, putative Patl_3295 9612cf6783f00fd963fa65474165e26a 452 Pfam PF00158 Sigma-54 interaction domain 142 308 7.0E-71 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Patl_3295 9612cf6783f00fd963fa65474165e26a 452 SUPERFAMILY SSF46689 355 445 3.58E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_3295 9612cf6783f00fd963fa65474165e26a 452 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Patl_1296 a168bc9068ecbae810c62d2d7ed53d97 555 SMART SM00382 31 232 2.4E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1296 a168bc9068ecbae810c62d2d7ed53d97 555 SMART SM00382 348 526 3.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1296 a168bc9068ecbae810c62d2d7ed53d97 555 SUPERFAMILY SSF52540 305 528 9.31E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1296 a168bc9068ecbae810c62d2d7ed53d97 555 Gene3D G3DSA:3.40.50.300 286 555 1.1E-72 T 11-10-2018 Patl_1296 a168bc9068ecbae810c62d2d7ed53d97 555 Pfam PF00005 ABC transporter 22 191 3.5E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1296 a168bc9068ecbae810c62d2d7ed53d97 555 Gene3D G3DSA:3.40.50.300 1 285 5.3E-84 T 11-10-2018 Patl_1296 a168bc9068ecbae810c62d2d7ed53d97 555 Pfam PF12848 ABC transporter 230 302 5.0E-12 T 11-10-2018 IPR032781 ABC-transporter extension domain Patl_1296 a168bc9068ecbae810c62d2d7ed53d97 555 Pfam PF00005 ABC transporter 340 473 1.1E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1296 a168bc9068ecbae810c62d2d7ed53d97 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_1296 a168bc9068ecbae810c62d2d7ed53d97 555 SUPERFAMILY SSF52540 13 244 7.72E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1296 a168bc9068ecbae810c62d2d7ed53d97 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 1.2E-289 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 Patl_1940 41fe8270ab74d0061407991ccc536860 1010 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 52 1009 3.6E-173 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor Patl_1940 41fe8270ab74d0061407991ccc536860 1010 Gene3D G3DSA:2.170.130.10 62 178 2.6E-13 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_1940 41fe8270ab74d0061407991ccc536860 1010 SUPERFAMILY SSF56935 55 1009 1.26E-77 T 11-10-2018 Patl_1940 41fe8270ab74d0061407991ccc536860 1010 Pfam PF00593 TonB dependent receptor 461 1009 8.4E-27 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1940 41fe8270ab74d0061407991ccc536860 1010 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 174 5.8E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1365 2da258b59d62b05c5c2e2e1147767cf3 958 Pfam PF00675 Insulinase (Peptidase family M16) 70 192 1.4E-18 T 11-10-2018 IPR011765 Peptidase M16, N-terminal Patl_1365 2da258b59d62b05c5c2e2e1147767cf3 958 Pfam PF00675 Insulinase (Peptidase family M16) 543 661 2.4E-8 T 11-10-2018 IPR011765 Peptidase M16, N-terminal Patl_1365 2da258b59d62b05c5c2e2e1147767cf3 958 Gene3D G3DSA:3.30.830.10 54 277 5.5E-67 T 11-10-2018 Patl_1365 2da258b59d62b05c5c2e2e1147767cf3 958 SUPERFAMILY SSF63411 49 273 1.0E-55 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Patl_1365 2da258b59d62b05c5c2e2e1147767cf3 958 Gene3D G3DSA:3.30.830.10 745 939 3.3E-34 T 11-10-2018 Patl_1365 2da258b59d62b05c5c2e2e1147767cf3 958 SUPERFAMILY SSF63411 288 475 7.97E-36 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Patl_1365 2da258b59d62b05c5c2e2e1147767cf3 958 Gene3D G3DSA:3.30.830.10 531 738 2.6E-42 T 11-10-2018 Patl_1365 2da258b59d62b05c5c2e2e1147767cf3 958 SUPERFAMILY SSF63411 523 726 1.15E-41 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Patl_1365 2da258b59d62b05c5c2e2e1147767cf3 958 Pfam PF05193 Peptidase M16 inactive domain 692 869 4.4E-26 T 11-10-2018 IPR007863 Peptidase M16, C-terminal Patl_1365 2da258b59d62b05c5c2e2e1147767cf3 958 Pfam PF05193 Peptidase M16 inactive domain 226 401 5.5E-28 T 11-10-2018 IPR007863 Peptidase M16, C-terminal Patl_1365 2da258b59d62b05c5c2e2e1147767cf3 958 SUPERFAMILY SSF63411 748 940 7.49E-36 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Patl_1365 2da258b59d62b05c5c2e2e1147767cf3 958 Gene3D G3DSA:3.30.830.10 283 479 2.1E-34 T 11-10-2018 Patl_2759 08573b3005fb657a8b1d49f43a8feff4 330 Gene3D G3DSA:3.40.50.720 124 299 1.6E-111 T 11-10-2018 Patl_2759 08573b3005fb657a8b1d49f43a8feff4 330 SMART SM00829 17 328 5.3E-6 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_2759 08573b3005fb657a8b1d49f43a8feff4 330 SUPERFAMILY SSF50129 3 136 8.57E-34 T 11-10-2018 IPR011032 GroES-like superfamily Patl_2759 08573b3005fb657a8b1d49f43a8feff4 330 Gene3D G3DSA:3.90.180.10 17 328 1.6E-111 T 11-10-2018 Patl_2759 08573b3005fb657a8b1d49f43a8feff4 330 Pfam PF00107 Zinc-binding dehydrogenase 156 252 1.1E-21 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_2759 08573b3005fb657a8b1d49f43a8feff4 330 SUPERFAMILY SSF51735 121 296 5.3E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2759 08573b3005fb657a8b1d49f43a8feff4 330 Pfam PF16884 N-terminal domain of oxidoreductase 6 111 1.2E-29 T 11-10-2018 Patl_1968 6af4f2b75b943ee3a312b62c42c91cc9 361 SUPERFAMILY SSF75005 38 304 4.29E-32 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Patl_1968 6af4f2b75b943ee3a312b62c42c91cc9 361 Gene3D G3DSA:2.115.10.20 2 361 1.4E-137 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Patl_1968 6af4f2b75b943ee3a312b62c42c91cc9 361 Pfam PF04616 Glycosyl hydrolases family 43 94 186 2.0E-9 T 11-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Patl_2725 3ebf9d47929bb27fed7ce0580d5b6d3f 724 Pfam PF00884 Sulfatase 24 357 3.0E-58 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_2725 3ebf9d47929bb27fed7ce0580d5b6d3f 724 Gene3D G3DSA:3.30.1120.10 408 471 1.4E-9 T 11-10-2018 Patl_2725 3ebf9d47929bb27fed7ce0580d5b6d3f 724 SUPERFAMILY SSF53649 22 465 6.19E-105 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_2725 3ebf9d47929bb27fed7ce0580d5b6d3f 724 Gene3D G3DSA:3.40.720.10 21 407 1.1E-94 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_2725 3ebf9d47929bb27fed7ce0580d5b6d3f 724 ProSitePatterns PS00523 Sulfatases signature 1. 71 83 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 Pfam PF12860 PAS fold 214 312 6.0E-10 T 11-10-2018 Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 Pfam PF12860 PAS fold 94 195 5.7E-8 T 11-10-2018 Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 Gene3D G3DSA:1.10.287.130 459 555 1.2E-12 T 11-10-2018 Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 Gene3D G3DSA:3.30.450.20 309 446 1.4E-21 T 11-10-2018 Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 Gene3D G3DSA:3.30.450.20 75 194 1.9E-6 T 11-10-2018 Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 SUPERFAMILY SSF55785 194 306 2.09E-6 T 11-10-2018 IPR035965 PAS domain superfamily Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 665 4.1E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 PRINTS PR00344 Bacterial sensor protein C-terminal signature 696 709 4.1E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 PRINTS PR00344 Bacterial sensor protein C-terminal signature 672 690 4.1E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 651 4.1E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 SMART SM00448 735 849 1.7E-4 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 SUPERFAMILY SSF55785 76 189 1.07E-5 T 11-10-2018 IPR035965 PAS domain superfamily Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 SMART SM00091 208 274 1.7 T 11-10-2018 IPR000014 PAS domain Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 SMART SM00091 88 155 21.0 T 11-10-2018 IPR000014 PAS domain Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 SMART SM00091 320 386 0.0012 T 11-10-2018 IPR000014 PAS domain Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 316 436 8.9E-15 T 11-10-2018 IPR000014 PAS domain Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 Gene3D G3DSA:3.40.50.2300 732 855 9.5E-14 T 11-10-2018 Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 SMART SM00086 391 433 0.0039 T 11-10-2018 IPR001610 PAC motif Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 Pfam PF08448 PAS fold 327 435 3.5E-20 T 11-10-2018 IPR013656 PAS fold-4 Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 SMART SM00387 601 712 1.4E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 602 709 8.0E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 Pfam PF00072 Response regulator receiver domain 737 847 8.5E-7 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 SMART SM00388 492 557 4.5E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 Gene3D G3DSA:3.30.565.10 558 720 1.8E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 SUPERFAMILY SSF55785 305 431 1.74E-18 T 11-10-2018 IPR035965 PAS domain superfamily Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 SUPERFAMILY SSF47384 479 557 6.87E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 Pfam PF00512 His Kinase A (phospho-acceptor) domain 492 557 1.2E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 SUPERFAMILY SSF52172 734 854 1.42E-13 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 SUPERFAMILY SSF55874 547 711 9.56E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1871 dab4cfc266890ff925ef4ba09ddbd32a 856 Gene3D G3DSA:3.30.450.20 195 308 9.2E-6 T 11-10-2018 Patl_2618 8606ee23f11e7d8580f649ff9aa54f9f 306 SUPERFAMILY SSF53850 90 293 7.24E-38 T 11-10-2018 Patl_2618 8606ee23f11e7d8580f649ff9aa54f9f 306 Pfam PF03466 LysR substrate binding domain 95 288 5.6E-19 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_2618 8606ee23f11e7d8580f649ff9aa54f9f 306 Gene3D G3DSA:1.10.10.10 1 87 9.6E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2618 8606ee23f11e7d8580f649ff9aa54f9f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.4E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2618 8606ee23f11e7d8580f649ff9aa54f9f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.4E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2618 8606ee23f11e7d8580f649ff9aa54f9f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.4E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2618 8606ee23f11e7d8580f649ff9aa54f9f 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 9.3E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2618 8606ee23f11e7d8580f649ff9aa54f9f 306 Gene3D G3DSA:3.40.190.10 171 266 3.5E-39 T 11-10-2018 Patl_2618 8606ee23f11e7d8580f649ff9aa54f9f 306 SUPERFAMILY SSF46785 6 85 1.6E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2618 8606ee23f11e7d8580f649ff9aa54f9f 306 Gene3D G3DSA:3.40.190.10 90 288 3.5E-39 T 11-10-2018 Patl_2529 932e985a4cc42a408854c9ec10a17d7a 212 PIRSF PIRSF036382 6 206 4.9E-54 T 11-10-2018 IPR008327 Signal transduction response regulator, antiterminator Patl_2529 932e985a4cc42a408854c9ec10a17d7a 212 SMART SM01012 144 199 1.0E-21 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 Patl_2529 932e985a4cc42a408854c9ec10a17d7a 212 Gene3D G3DSA:1.10.10.10 147 206 1.5E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2529 932e985a4cc42a408854c9ec10a17d7a 212 Pfam PF03861 ANTAR domain 148 199 6.4E-18 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 Patl_2529 932e985a4cc42a408854c9ec10a17d7a 212 Pfam PF00072 Response regulator receiver domain 19 125 1.8E-10 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2529 932e985a4cc42a408854c9ec10a17d7a 212 SUPERFAMILY SSF52172 10 199 3.27E-46 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2529 932e985a4cc42a408854c9ec10a17d7a 212 Gene3D G3DSA:3.40.50.2300 5 145 1.6E-17 T 11-10-2018 Patl_2529 932e985a4cc42a408854c9ec10a17d7a 212 SMART SM00448 17 128 1.2E-5 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 SUPERFAMILY SSF54980 392 467 1.87E-16 T 11-10-2018 IPR035647 EF-G domain III/V-like Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 1.2E-44 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 Pfam PF03144 Elongation factor Tu domain 2 313 379 1.3E-10 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 PRINTS PR00315 GTP-binding elongation factor signature 137 146 2.9E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 PRINTS PR00315 GTP-binding elongation factor signature 15 28 2.9E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 PRINTS PR00315 GTP-binding elongation factor signature 85 95 2.9E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 PRINTS PR00315 GTP-binding elongation factor signature 65 73 2.9E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 Gene3D G3DSA:3.40.50.300 110 274 1.1E-112 T 11-10-2018 Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 SUPERFAMILY SSF52540 10 277 1.05E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 8 528 1.7E-288 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 SUPERFAMILY SSF50447 261 392 5.52E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 163 4.9E-18 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 526 51.461 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 Gene3D G3DSA:3.30.70.3280 389 528 2.4E-51 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 Gene3D G3DSA:3.40.50.300 72 378 1.1E-112 T 11-10-2018 Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 Pfam PF16658 Class II release factor RF3, C-terminal domain 386 513 1.9E-44 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal Patl_1358 0d0103e20c908a7ee9e6240a5924d8a4 528 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Patl_2661 a663b1a6ae35d4b6033d1e7b538eab77 473 Gene3D G3DSA:2.40.50.100 100 134 2.9E-10 T 11-10-2018 Patl_2661 a663b1a6ae35d4b6033d1e7b538eab77 473 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 62 473 6.0E-117 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 Patl_2661 a663b1a6ae35d4b6033d1e7b538eab77 473 Gene3D G3DSA:2.40.30.170 348 455 1.5E-13 T 11-10-2018 Patl_2661 a663b1a6ae35d4b6033d1e7b538eab77 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 113 133 4.9E-41 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Patl_2661 a663b1a6ae35d4b6033d1e7b538eab77 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 340 361 4.9E-41 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Patl_2661 a663b1a6ae35d4b6033d1e7b538eab77 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 397 420 4.9E-41 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Patl_2661 a663b1a6ae35d4b6033d1e7b538eab77 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 437 452 4.9E-41 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Patl_2661 a663b1a6ae35d4b6033d1e7b538eab77 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 452 472 4.9E-41 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Patl_2661 a663b1a6ae35d4b6033d1e7b538eab77 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 373 397 4.9E-41 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Patl_2661 a663b1a6ae35d4b6033d1e7b538eab77 473 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 71 94 4.9E-41 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Patl_2661 a663b1a6ae35d4b6033d1e7b538eab77 473 Gene3D G3DSA:1.10.287.470 135 218 2.9E-10 T 11-10-2018 Patl_2661 a663b1a6ae35d4b6033d1e7b538eab77 473 Pfam PF13437 HlyD family secretion protein 328 427 6.2E-16 T 11-10-2018 Patl_2661 a663b1a6ae35d4b6033d1e7b538eab77 473 Pfam PF13533 Biotin-lipoyl like 107 138 6.2E-7 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Patl_2661 a663b1a6ae35d4b6033d1e7b538eab77 473 Gene3D G3DSA:2.40.30.170 89 99 2.9E-10 T 11-10-2018 Patl_2661 a663b1a6ae35d4b6033d1e7b538eab77 473 ProSitePatterns PS00543 HlyD family secretion proteins signature. 437 459 - T 11-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 Patl_2661 a663b1a6ae35d4b6033d1e7b538eab77 473 SUPERFAMILY SSF111369 94 165 2.48E-6 T 11-10-2018 Patl_0392 109506684442a55f3b48c3a83619d04b 549 SUPERFAMILY SSF161098 298 535 8.78E-20 T 11-10-2018 IPR035906 MetI-like superfamily Patl_0392 109506684442a55f3b48c3a83619d04b 549 SUPERFAMILY SSF161098 5 265 1.4E-12 T 11-10-2018 IPR035906 MetI-like superfamily Patl_0392 109506684442a55f3b48c3a83619d04b 549 Gene3D G3DSA:1.10.3720.10 49 270 2.2E-10 T 11-10-2018 IPR035906 MetI-like superfamily Patl_0392 109506684442a55f3b48c3a83619d04b 549 Gene3D G3DSA:1.10.3720.10 292 542 7.1E-18 T 11-10-2018 IPR035906 MetI-like superfamily Patl_1856 0b61699e0fd982c595365f22dcae6a55 294 SUPERFAMILY SSF53850 28 282 3.35E-24 T 11-10-2018 Patl_1856 0b61699e0fd982c595365f22dcae6a55 294 Gene3D G3DSA:3.40.190.10 24 94 1.9E-10 T 11-10-2018 Patl_1856 0b61699e0fd982c595365f22dcae6a55 294 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 86 1.7E-8 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_1856 0b61699e0fd982c595365f22dcae6a55 294 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 58 71 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site Patl_1856 0b61699e0fd982c595365f22dcae6a55 294 Gene3D G3DSA:3.40.190.10 131 282 8.7E-11 T 11-10-2018 Patl_1856 0b61699e0fd982c595365f22dcae6a55 294 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 132 282 6.7E-11 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_1856 0b61699e0fd982c595365f22dcae6a55 294 Gene3D G3DSA:3.40.190.10 141 243 8.7E-11 T 11-10-2018 Patl_1856 0b61699e0fd982c595365f22dcae6a55 294 SMART SM00062 36 281 3.7E-5 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_2078 c9db67ef707f36aa0d486c50fa8de224 276 Pfam PF00924 Mechanosensitive ion channel 192 269 9.1E-8 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Patl_2078 c9db67ef707f36aa0d486c50fa8de224 276 SUPERFAMILY SSF50182 222 272 1.57E-5 T 11-10-2018 IPR010920 LSM domain superfamily Patl_2078 c9db67ef707f36aa0d486c50fa8de224 276 Pfam PF05552 Conserved TM helix 16 62 5.3E-13 T 11-10-2018 IPR008910 Conserved TM helix Patl_2078 c9db67ef707f36aa0d486c50fa8de224 276 Pfam PF05552 Conserved TM helix 115 156 3.5E-9 T 11-10-2018 IPR008910 Conserved TM helix Patl_0247 09b6b41b67e3cdd4768e8e2665cbc6f3 143 Pfam PF01475 Ferric uptake regulator family 17 135 1.3E-17 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Patl_0247 09b6b41b67e3cdd4768e8e2665cbc6f3 143 SUPERFAMILY SSF46785 8 140 6.37E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0247 09b6b41b67e3cdd4768e8e2665cbc6f3 143 Gene3D G3DSA:3.30.1490.190 83 143 1.4E-16 T 11-10-2018 Patl_0247 09b6b41b67e3cdd4768e8e2665cbc6f3 143 Gene3D G3DSA:1.10.10.10 2 82 1.0E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 Gene3D G3DSA:1.10.287.130 301 398 3.0E-17 T 11-10-2018 Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 SUPERFAMILY SSF52172 585 703 2.13E-22 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 SUPERFAMILY SSF52172 714 836 1.57E-32 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 SMART SM00388 335 400 1.0E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 Gene3D G3DSA:3.30.565.10 399 571 7.8E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 Pfam PF00512 His Kinase A (phospho-acceptor) domain 336 400 1.1E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 SMART SM00387 447 568 1.7E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 Gene3D G3DSA:3.40.50.2300 710 839 4.4E-34 T 11-10-2018 Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 SUPERFAMILY SSF47384 331 401 5.1E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 Pfam PF00072 Response regulator receiver domain 720 831 3.7E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 Pfam PF00072 Response regulator receiver domain 588 700 1.7E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 SMART SM00448 586 700 2.7E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 SMART SM00448 718 832 1.0E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 565 1.5E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 510 1.5E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 546 1.5E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 SUPERFAMILY SSF55874 390 566 1.83E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 Gene3D G3DSA:3.40.50.2300 584 709 6.7E-24 T 11-10-2018 Patl_3915 2f94f7073e9b271e5acbd6ed0998d911 839 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 447 567 9.2E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3925 f63c55923b5b975c3e1a9685ef7d95c2 477 Gene3D G3DSA:3.40.50.1820 19 225 4.0E-6 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3925 f63c55923b5b975c3e1a9685ef7d95c2 477 Pfam PF00756 Putative esterase 240 433 1.8E-18 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Patl_3925 f63c55923b5b975c3e1a9685ef7d95c2 477 Gene3D G3DSA:3.40.50.1820 226 477 9.9E-58 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3925 f63c55923b5b975c3e1a9685ef7d95c2 477 SUPERFAMILY SSF53474 39 173 1.15E-7 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3925 f63c55923b5b975c3e1a9685ef7d95c2 477 SUPERFAMILY SSF53474 219 473 6.49E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1419 248c387d9051a16d49dcdf0608841964 292 SUPERFAMILY SSF51621 4 286 2.15E-102 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Patl_1419 248c387d9051a16d49dcdf0608841964 292 ProSitePatterns PS00161 Isocitrate lyase signature. 117 122 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 Patl_1419 248c387d9051a16d49dcdf0608841964 292 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 4 287 5.8E-128 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 Patl_1419 248c387d9051a16d49dcdf0608841964 292 Pfam PF13714 Phosphoenolpyruvate phosphomutase 7 251 4.9E-51 T 11-10-2018 Patl_1419 248c387d9051a16d49dcdf0608841964 292 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 1 288 49.269 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 Patl_1419 248c387d9051a16d49dcdf0608841964 292 Gene3D G3DSA:3.20.20.60 1 292 2.4E-106 T 11-10-2018 Patl_2681 1b6c1eb29dd6b824a7636d268135a67f 335 Pfam PF13377 Periplasmic binding protein-like domain 168 331 2.8E-31 T 11-10-2018 Patl_2681 1b6c1eb29dd6b824a7636d268135a67f 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_2681 1b6c1eb29dd6b824a7636d268135a67f 335 SUPERFAMILY SSF53822 61 332 3.93E-71 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Patl_2681 1b6c1eb29dd6b824a7636d268135a67f 335 Gene3D G3DSA:1.10.260.40 1 59 7.5E-23 T 11-10-2018 Patl_2681 1b6c1eb29dd6b824a7636d268135a67f 335 SMART SM00354 1 71 1.4E-33 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_2681 1b6c1eb29dd6b824a7636d268135a67f 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 Patl_2681 1b6c1eb29dd6b824a7636d268135a67f 335 Gene3D G3DSA:3.40.50.2300 61 306 4.6E-66 T 11-10-2018 Patl_2681 1b6c1eb29dd6b824a7636d268135a67f 335 SUPERFAMILY SSF47413 1 59 2.35E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_2681 1b6c1eb29dd6b824a7636d268135a67f 335 Gene3D G3DSA:3.40.50.2300 160 289 4.6E-66 T 11-10-2018 Patl_2681 1b6c1eb29dd6b824a7636d268135a67f 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.9E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_2681 1b6c1eb29dd6b824a7636d268135a67f 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.9E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_0924 28f27a61a47600a07f365bc144fbea08 422 SMART SM00477 43 255 7.7E-12 T 11-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 Patl_0924 28f27a61a47600a07f365bc144fbea08 422 SUPERFAMILY SSF54060 34 252 1.24E-40 T 11-10-2018 Patl_0924 28f27a61a47600a07f365bc144fbea08 422 SMART SM00892 40 255 1.6E-49 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 Patl_0924 28f27a61a47600a07f365bc144fbea08 422 Pfam PF01223 DNA/RNA non-specific endonuclease 37 253 3.4E-35 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 Patl_0924 28f27a61a47600a07f365bc144fbea08 422 Gene3D G3DSA:3.40.570.10 21 268 7.8E-35 T 11-10-2018 Patl_0924 28f27a61a47600a07f365bc144fbea08 422 SUPERFAMILY SSF74853 322 399 1.57E-7 T 11-10-2018 IPR036415 Lamin tail domain superfamily Patl_0924 28f27a61a47600a07f365bc144fbea08 422 Pfam PF00932 Lamin Tail Domain 308 399 1.1E-14 T 11-10-2018 IPR001322 Lamin tail domain Patl_2675 4c2a473392e662811b522a3e14902a34 528 Gene3D G3DSA:1.20.150.20 381 512 8.6E-29 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2675 4c2a473392e662811b522a3e14902a34 528 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_2675 4c2a473392e662811b522a3e14902a34 528 Gene3D G3DSA:3.40.50.300 102 379 1.9E-115 T 11-10-2018 Patl_2675 4c2a473392e662811b522a3e14902a34 528 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 5 513 41.068 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2675 4c2a473392e662811b522a3e14902a34 528 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 32 100 5.3E-8 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_2675 4c2a473392e662811b522a3e14902a34 528 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 379 502 3.2E-31 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2675 4c2a473392e662811b522a3e14902a34 528 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 21 504 2.6E-192 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2675 4c2a473392e662811b522a3e14902a34 528 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 157 372 7.8E-67 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_2675 4c2a473392e662811b522a3e14902a34 528 SUPERFAMILY SSF50615 20 102 2.88E-21 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_2675 4c2a473392e662811b522a3e14902a34 528 Gene3D G3DSA:2.40.30.20 13 101 1.3E-21 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_2675 4c2a473392e662811b522a3e14902a34 528 SUPERFAMILY SSF47917 382 508 2.46E-28 T 11-10-2018 Patl_2675 4c2a473392e662811b522a3e14902a34 528 SUPERFAMILY SSF52540 104 378 6.08E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2675 4c2a473392e662811b522a3e14902a34 528 TIGRFAM TIGR03324 alt_F1F0_F1_al: alternate F1F0 ATPase, F1 subunit alpha 9 505 1.2E-282 T 11-10-2018 IPR017710 Alternate ATP synthase, F1 complex, subunit alpha GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_2194 a99406eb4fbb05bae5b6a77ab7b4c1de 108 SUPERFAMILY SSF117782 1 105 1.44E-37 T 11-10-2018 IPR035439 UPF0145 domain superfamily Patl_2194 a99406eb4fbb05bae5b6a77ab7b4c1de 108 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 23.858 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 Patl_2194 a99406eb4fbb05bae5b6a77ab7b4c1de 108 Pfam PF01906 Putative heavy-metal-binding 1 104 8.5E-40 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 Patl_2194 a99406eb4fbb05bae5b6a77ab7b4c1de 108 Gene3D G3DSA:3.30.110.70 2 107 8.7E-43 T 11-10-2018 Patl_1010 fe0e8377314f6361901a5d11e9758f69 38 Pfam PF00444 Ribosomal protein L36 1 38 7.4E-20 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1010 fe0e8377314f6361901a5d11e9758f69 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.176 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1010 fe0e8377314f6361901a5d11e9758f69 38 SUPERFAMILY SSF57840 1 38 5.76E-17 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1010 fe0e8377314f6361901a5d11e9758f69 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1010 fe0e8377314f6361901a5d11e9758f69 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 1.0E-9 T 11-10-2018 Patl_1010 fe0e8377314f6361901a5d11e9758f69 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 6.0E-22 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0322 211d68aaa25e7ea574ca76418b46635a 531 Pfam PF00501 AMP-binding enzyme 23 428 8.7E-86 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Patl_0322 211d68aaa25e7ea574ca76418b46635a 531 Gene3D G3DSA:3.40.50.12780 3 423 7.4E-96 T 11-10-2018 Patl_0322 211d68aaa25e7ea574ca76418b46635a 531 Pfam PF13193 AMP-binding enzyme C-terminal domain 437 512 9.2E-13 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Patl_0322 211d68aaa25e7ea574ca76418b46635a 531 Gene3D G3DSA:3.30.300.310 424 529 7.4E-25 T 11-10-2018 Patl_0322 211d68aaa25e7ea574ca76418b46635a 531 SUPERFAMILY SSF56801 15 525 1.15E-125 T 11-10-2018 Patl_0322 211d68aaa25e7ea574ca76418b46635a 531 ProSitePatterns PS00455 Putative AMP-binding domain signature. 181 192 - T 11-10-2018 IPR020845 AMP-binding, conserved site Patl_3811 2b8460c9f0290f593cfcf573858ed19e 547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 11-10-2018 IPR020845 AMP-binding, conserved site Patl_3811 2b8460c9f0290f593cfcf573858ed19e 547 Gene3D G3DSA:3.40.50.12780 2 417 2.5E-90 T 11-10-2018 Patl_3811 2b8460c9f0290f593cfcf573858ed19e 547 SUPERFAMILY SSF56801 5 530 8.24E-116 T 11-10-2018 Patl_3811 2b8460c9f0290f593cfcf573858ed19e 547 Gene3D G3DSA:3.30.300.30 419 531 3.0E-6 T 11-10-2018 Patl_3811 2b8460c9f0290f593cfcf573858ed19e 547 Pfam PF00501 AMP-binding enzyme 15 424 1.5E-93 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Patl_2864 0ce64a513a30d4ad60fd4c64ea6bb0c8 346 Gene3D G3DSA:3.40.190.170 32 345 5.5E-76 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Patl_2864 0ce64a513a30d4ad60fd4c64ea6bb0c8 346 PIRSF PIRSF006470 3 340 3.8E-65 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Patl_2864 0ce64a513a30d4ad60fd4c64ea6bb0c8 346 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 318 3.9E-59 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 734 795 2.6E-29 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 Gene3D G3DSA:3.10.20.690 597 685 2.3E-17 T 11-10-2018 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 Gene3D G3DSA:3.30.565.10 3 221 1.1E-94 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 176 3.3E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 SUPERFAMILY SSF55874 6 219 2.49E-74 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 Gene3D G3DSA:3.40.50.670 395 596 1.2E-72 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR00418 DNA topoisomerase II family signature 115 129 1.3E-69 T 11-10-2018 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR00418 DNA topoisomerase II family signature 72 85 1.3E-69 T 11-10-2018 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR00418 DNA topoisomerase II family signature 270 283 1.3E-69 T 11-10-2018 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR00418 DNA topoisomerase II family signature 422 436 1.3E-69 T 11-10-2018 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR00418 DNA topoisomerase II family signature 489 505 1.3E-69 T 11-10-2018 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR00418 DNA topoisomerase II family signature 527 539 1.3E-69 T 11-10-2018 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR00418 DNA topoisomerase II family signature 37 52 1.3E-69 T 11-10-2018 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR00418 DNA topoisomerase II family signature 507 524 1.3E-69 T 11-10-2018 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR00418 DNA topoisomerase II family signature 738 754 1.3E-69 T 11-10-2018 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 ProSitePatterns PS00177 DNA topoisomerase II signature. 424 432 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 SUPERFAMILY SSF56719 396 797 7.59E-86 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 Pfam PF01751 Toprim domain 421 533 4.9E-19 T 11-10-2018 IPR006171 TOPRIM domain Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 Pfam PF00204 DNA gyrase B 222 392 9.1E-59 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 Gene3D G3DSA:3.30.230.10 222 394 3.7E-72 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 SMART SM00387 33 177 2.0E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR01159 DNA gyrase subunit B signature 759 771 4.4E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR01159 DNA gyrase subunit B signature 362 376 4.4E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR01159 DNA gyrase subunit B signature 244 262 4.4E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR01159 DNA gyrase subunit B signature 182 197 4.4E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR01159 DNA gyrase subunit B signature 221 243 4.4E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR01159 DNA gyrase subunit B signature 197 210 4.4E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR01159 DNA gyrase subunit B signature 376 396 4.4E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR01159 DNA gyrase subunit B signature 775 791 4.4E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR01159 DNA gyrase subunit B signature 314 330 4.4E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR01159 DNA gyrase subunit B signature 7 17 4.4E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 PRINTS PR01159 DNA gyrase subunit B signature 472 481 4.4E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 SUPERFAMILY SSF54211 222 394 4.93E-58 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 Gene3D G3DSA:3.40.50.670 703 804 2.8E-25 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 4 806 103.723 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 SMART SM00433 37 799 3.1E-263 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Patl_0004 a8c7752b8c1b81c7505bdf390e07696b 806 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 7 806 0.0 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0297 1c2e126119bfb7a669b9d09056df0f90 159 Pfam PF01475 Ferric uptake regulator family 19 144 5.4E-14 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Patl_0297 1c2e126119bfb7a669b9d09056df0f90 159 SUPERFAMILY SSF46785 14 148 2.04E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0297 1c2e126119bfb7a669b9d09056df0f90 159 Gene3D G3DSA:3.30.1490.190 95 154 3.5E-12 T 11-10-2018 Patl_0297 1c2e126119bfb7a669b9d09056df0f90 159 Gene3D G3DSA:1.10.10.10 2 90 1.0E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_4195 8295c06e094aa1eb2825f89163a8e4f4 150 PIRSF PIRSF029543 22 149 2.1E-25 T 11-10-2018 IPR016924 Uncharacterised conserved protein UCP029543 Patl_3368 bb4d081346053370011c5966bc946ea0 717 SUPERFAMILY SSF56935 47 717 1.9E-66 T 11-10-2018 Patl_3368 bb4d081346053370011c5966bc946ea0 717 Gene3D G3DSA:2.170.130.10 29 142 1.1E-7 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_3368 bb4d081346053370011c5966bc946ea0 717 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 700 717 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site Patl_3368 bb4d081346053370011c5966bc946ea0 717 Pfam PF00593 TonB dependent receptor 222 715 1.4E-26 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3368 bb4d081346053370011c5966bc946ea0 717 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 136 7.2E-7 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1299 946dc078421765eb3b26dc9429bc3ecb 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Patl_1299 946dc078421765eb3b26dc9429bc3ecb 418 Gene3D G3DSA:3.90.1150.10 10 396 3.7E-185 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_1299 946dc078421765eb3b26dc9429bc3ecb 418 Gene3D G3DSA:3.40.640.10 37 290 3.7E-185 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_1299 946dc078421765eb3b26dc9429bc3ecb 418 PIRSF PIRSF000412 1 418 6.0E-168 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Patl_1299 946dc078421765eb3b26dc9429bc3ecb 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 418 52.956 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Patl_1299 946dc078421765eb3b26dc9429bc3ecb 418 Pfam PF00464 Serine hydroxymethyltransferase 9 387 2.6E-181 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Patl_1299 946dc078421765eb3b26dc9429bc3ecb 418 SUPERFAMILY SSF53383 8 417 6.39E-180 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_0733 98b6caf2898c4acb42c147e9ec2b9e0a 461 Gene3D G3DSA:3.40.50.300 2 378 2.9E-14 T 11-10-2018 Patl_0733 98b6caf2898c4acb42c147e9ec2b9e0a 461 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 28 354 2.8E-14 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Patl_0733 98b6caf2898c4acb42c147e9ec2b9e0a 461 SUPERFAMILY SSF52540 12 374 1.71E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2139 c1758d340904a685b4d1e233293ab86b 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_2139 c1758d340904a685b4d1e233293ab86b 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 252 3.2E-65 T 11-10-2018 Patl_2139 c1758d340904a685b4d1e233293ab86b 254 Gene3D G3DSA:3.40.50.720 1 253 1.8E-80 T 11-10-2018 Patl_2139 c1758d340904a685b4d1e233293ab86b 254 SUPERFAMILY SSF51735 10 253 1.39E-82 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2139 c1758d340904a685b4d1e233293ab86b 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 7.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2139 c1758d340904a685b4d1e233293ab86b 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 7.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2139 c1758d340904a685b4d1e233293ab86b 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 7.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2139 c1758d340904a685b4d1e233293ab86b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.0E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2139 c1758d340904a685b4d1e233293ab86b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.0E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2139 c1758d340904a685b4d1e233293ab86b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.0E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2139 c1758d340904a685b4d1e233293ab86b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.0E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2139 c1758d340904a685b4d1e233293ab86b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.0E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2139 c1758d340904a685b4d1e233293ab86b 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.0E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2269 2870af5f746903fda6df2c0547def034 957 Gene3D G3DSA:3.40.50.300 504 718 2.0E-23 T 11-10-2018 Patl_2269 2870af5f746903fda6df2c0547def034 957 Pfam PF13361 UvrD-like helicase C-terminal domain 774 929 2.1E-11 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Patl_2269 2870af5f746903fda6df2c0547def034 957 SUPERFAMILY SSF52540 239 945 9.87E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2269 2870af5f746903fda6df2c0547def034 957 Gene3D G3DSA:3.40.50.300 723 946 6.9E-21 T 11-10-2018 Patl_2269 2870af5f746903fda6df2c0547def034 957 Pfam PF00580 UvrD/REP helicase N-terminal domain 240 713 1.4E-34 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Patl_2269 2870af5f746903fda6df2c0547def034 957 Gene3D G3DSA:3.40.50.300 233 387 3.4E-23 T 11-10-2018 Patl_0224 59cca4fa6ba9d4eaa0132e6dd3b3b47b 300 SUPERFAMILY SSF52540 4 286 1.08E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0224 59cca4fa6ba9d4eaa0132e6dd3b3b47b 300 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Patl_0224 59cca4fa6ba9d4eaa0132e6dd3b3b47b 300 Gene3D G3DSA:3.40.50.300 1 290 6.1E-112 T 11-10-2018 Patl_0224 59cca4fa6ba9d4eaa0132e6dd3b3b47b 300 PRINTS PR00478 Phosphoribulokinase family signature 164 181 5.8E-28 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Patl_0224 59cca4fa6ba9d4eaa0132e6dd3b3b47b 300 PRINTS PR00478 Phosphoribulokinase family signature 182 205 5.8E-28 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Patl_0224 59cca4fa6ba9d4eaa0132e6dd3b3b47b 300 PRINTS PR00478 Phosphoribulokinase family signature 12 29 5.8E-28 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Patl_0224 59cca4fa6ba9d4eaa0132e6dd3b3b47b 300 PRINTS PR00478 Phosphoribulokinase family signature 126 144 5.8E-28 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Patl_0224 59cca4fa6ba9d4eaa0132e6dd3b3b47b 300 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 3.2E-70 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Patl_2052 088c67e309268d19b776d0d766c6484b 406 Gene3D G3DSA:3.90.1150.10 9 378 1.8E-133 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_2052 088c67e309268d19b776d0d766c6484b 406 SUPERFAMILY SSF53383 4 386 2.75E-87 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_2052 088c67e309268d19b776d0d766c6484b 406 Pfam PF00266 Aminotransferase class-V 39 347 3.3E-24 T 11-10-2018 IPR000192 Aminotransferase class V domain Patl_2052 088c67e309268d19b776d0d766c6484b 406 Gene3D G3DSA:3.40.640.10 20 281 1.8E-133 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_2052 088c67e309268d19b776d0d766c6484b 406 PIRSF PIRSF000524 2 404 9.6E-103 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Patl_2857 a9130682eb82ea78df9864f7744817ce 167 SUPERFAMILY SSF55729 2 159 1.87E-39 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_2857 a9130682eb82ea78df9864f7744817ce 167 Gene3D G3DSA:3.40.630.30 1 163 4.6E-39 T 11-10-2018 Patl_2857 a9130682eb82ea78df9864f7744817ce 167 Pfam PF13302 Acetyltransferase (GNAT) domain 2 137 2.3E-21 T 11-10-2018 IPR000182 GNAT domain Patl_1625 e07264895397c49c7253cbd6b90c47e2 457 Gene3D G3DSA:3.30.1330.90 10 158 2.7E-52 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Patl_1625 e07264895397c49c7253cbd6b90c47e2 457 Pfam PF03315 Serine dehydratase beta chain 3 155 2.8E-57 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Patl_1625 e07264895397c49c7253cbd6b90c47e2 457 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 454 1.1E-209 T 11-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Patl_1625 e07264895397c49c7253cbd6b90c47e2 457 Pfam PF03313 Serine dehydratase alpha chain 189 451 5.0E-100 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Patl_1625 e07264895397c49c7253cbd6b90c47e2 457 SUPERFAMILY SSF143548 16 155 7.32E-45 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Patl_1966 033ac36663a8768a4c9c2ed91c8b59e2 1240 SUPERFAMILY SSF56935 67 1240 2.43E-74 T 11-10-2018 Patl_1966 033ac36663a8768a4c9c2ed91c8b59e2 1240 Gene3D G3DSA:2.170.130.10 56 195 1.0E-14 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_1966 033ac36663a8768a4c9c2ed91c8b59e2 1240 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 70 1240 4.5E-169 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor Patl_1966 033ac36663a8768a4c9c2ed91c8b59e2 1240 Pfam PF00593 TonB dependent receptor 813 1239 2.4E-29 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1966 033ac36663a8768a4c9c2ed91c8b59e2 1240 Pfam PF07715 TonB-dependent Receptor Plug Domain 88 189 1.3E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_4257 772afd3b1679eb70611b1f9552b7bd44 215 PRINTS PR01021 OMPA domain signature 154 170 2.1E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Patl_4257 772afd3b1679eb70611b1f9552b7bd44 215 PRINTS PR01021 OMPA domain signature 139 154 2.1E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Patl_4257 772afd3b1679eb70611b1f9552b7bd44 215 Pfam PF00691 OmpA family 108 203 5.8E-23 T 11-10-2018 IPR006665 OmpA-like domain Patl_4257 772afd3b1679eb70611b1f9552b7bd44 215 Gene3D G3DSA:3.30.1330.60 72 215 1.9E-47 T 11-10-2018 IPR036737 OmpA-like domain superfamily Patl_4257 772afd3b1679eb70611b1f9552b7bd44 215 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 192 212 2.7E-7 T 11-10-2018 Patl_4257 772afd3b1679eb70611b1f9552b7bd44 215 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 154 171 2.7E-7 T 11-10-2018 Patl_4257 772afd3b1679eb70611b1f9552b7bd44 215 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 172 191 2.7E-7 T 11-10-2018 Patl_4257 772afd3b1679eb70611b1f9552b7bd44 215 Pfam PF13488 Glycine zipper 33 78 8.4E-13 T 11-10-2018 IPR039567 Glycine zipper domain Patl_4257 772afd3b1679eb70611b1f9552b7bd44 215 SUPERFAMILY SSF103088 96 211 7.59E-38 T 11-10-2018 IPR036737 OmpA-like domain superfamily Patl_2006 edcae8454f6fc8bfc6af39f76ca3fdc0 647 Gene3D G3DSA:1.10.287.380 567 647 2.4E-24 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Patl_2006 edcae8454f6fc8bfc6af39f76ca3fdc0 647 Gene3D G3DSA:3.40.50.300 16 292 9.5E-71 T 11-10-2018 Patl_2006 edcae8454f6fc8bfc6af39f76ca3fdc0 647 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_2006 edcae8454f6fc8bfc6af39f76ca3fdc0 647 SMART SM00382 357 527 3.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2006 edcae8454f6fc8bfc6af39f76ca3fdc0 647 SMART SM00382 41 243 1.6E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2006 edcae8454f6fc8bfc6af39f76ca3fdc0 647 SUPERFAMILY SSF52540 327 538 1.64E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2006 edcae8454f6fc8bfc6af39f76ca3fdc0 647 Pfam PF00005 ABC transporter 32 198 1.9E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_2006 edcae8454f6fc8bfc6af39f76ca3fdc0 647 Pfam PF00005 ABC transporter 349 482 1.1E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_2006 edcae8454f6fc8bfc6af39f76ca3fdc0 647 Pfam PF12848 ABC transporter 237 310 6.8E-11 T 11-10-2018 IPR032781 ABC-transporter extension domain Patl_2006 edcae8454f6fc8bfc6af39f76ca3fdc0 647 Gene3D G3DSA:3.40.50.300 295 566 3.7E-62 T 11-10-2018 Patl_2006 edcae8454f6fc8bfc6af39f76ca3fdc0 647 SUPERFAMILY SSF52540 16 256 1.72E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2006 edcae8454f6fc8bfc6af39f76ca3fdc0 647 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_2006 edcae8454f6fc8bfc6af39f76ca3fdc0 647 Pfam PF16326 ABC transporter C-terminal domain 575 643 1.8E-18 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 Patl_1658 d36c0b1c8e7cf63d54962d8484e1fea0 647 SMART SM00028 412 445 6.2E-8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1658 d36c0b1c8e7cf63d54962d8484e1fea0 647 Pfam PF13519 von Willebrand factor type A domain 99 205 4.6E-13 T 11-10-2018 IPR002035 von Willebrand factor, type A Patl_1658 d36c0b1c8e7cf63d54962d8484e1fea0 647 Gene3D G3DSA:3.40.50.410 98 293 4.3E-33 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Patl_1658 d36c0b1c8e7cf63d54962d8484e1fea0 647 SUPERFAMILY SSF53300 99 282 5.28E-16 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Patl_1658 d36c0b1c8e7cf63d54962d8484e1fea0 647 Pfam PF00515 Tetratricopeptide repeat 412 445 4.0E-9 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 Patl_1658 d36c0b1c8e7cf63d54962d8484e1fea0 647 Gene3D G3DSA:1.25.40.10 354 464 1.2E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1658 d36c0b1c8e7cf63d54962d8484e1fea0 647 SUPERFAMILY SSF48452 352 463 5.13E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0944 c83b79ee0339183f749aadee80b0c943 133 SUPERFAMILY SSF52821 8 130 1.57E-23 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Patl_0944 c83b79ee0339183f749aadee80b0c943 133 SMART SM00450 22 129 3.0E-8 T 11-10-2018 IPR001763 Rhodanese-like domain Patl_0944 c83b79ee0339183f749aadee80b0c943 133 Pfam PF00581 Rhodanese-like domain 31 125 1.6E-10 T 11-10-2018 IPR001763 Rhodanese-like domain Patl_0944 c83b79ee0339183f749aadee80b0c943 133 Gene3D G3DSA:3.40.250.10 3 132 1.1E-23 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Patl_0624 52e3ea3241f095e57e2828a5e9632f3e 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Patl_0624 52e3ea3241f095e57e2828a5e9632f3e 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 167 1.3E-56 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Patl_0624 52e3ea3241f095e57e2828a5e9632f3e 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 331 1.0E-44 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Patl_0624 52e3ea3241f095e57e2828a5e9632f3e 572 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 565 5.4E-256 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Patl_0624 52e3ea3241f095e57e2828a5e9632f3e 572 SUPERFAMILY SSF52467 189 362 1.1E-62 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Patl_0624 52e3ea3241f095e57e2828a5e9632f3e 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 542 9.8E-50 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Patl_0624 52e3ea3241f095e57e2828a5e9632f3e 572 SUPERFAMILY SSF52518 372 565 2.4E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Patl_0624 52e3ea3241f095e57e2828a5e9632f3e 572 Gene3D G3DSA:3.40.50.970 1 178 1.5E-68 T 11-10-2018 Patl_0624 52e3ea3241f095e57e2828a5e9632f3e 572 Gene3D G3DSA:3.40.50.970 364 565 2.8E-65 T 11-10-2018 Patl_0624 52e3ea3241f095e57e2828a5e9632f3e 572 SUPERFAMILY SSF52518 2 183 4.71E-63 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Patl_0624 52e3ea3241f095e57e2828a5e9632f3e 572 Gene3D G3DSA:3.40.50.1220 190 360 5.9E-61 T 11-10-2018 Patl_0669 85b3093b8488ae3ad475c9c3c887fe6d 203 Gene3D G3DSA:3.30.70.60 99 202 6.8E-34 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Patl_0669 85b3093b8488ae3ad475c9c3c887fe6d 203 Pfam PF04350 Pilus assembly protein, PilO 54 192 3.2E-51 T 11-10-2018 IPR007445 Pilus assembly protein, PilO Patl_0669 85b3093b8488ae3ad475c9c3c887fe6d 203 PIRSF PIRSF016482 5 203 4.3E-56 T 11-10-2018 IPR007445 Pilus assembly protein, PilO Patl_2148 e050dc950ac5d71f8f036f25fd004f7d 133 SUPERFAMILY SSF81273 90 132 1.49E-8 T 11-10-2018 Patl_2148 e050dc950ac5d71f8f036f25fd004f7d 133 Pfam PF00816 H-NS histone family 41 126 2.0E-16 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 Patl_2148 e050dc950ac5d71f8f036f25fd004f7d 133 PIRSF PIRSF002096 1 132 1.6E-45 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 Patl_2148 e050dc950ac5d71f8f036f25fd004f7d 133 SMART SM00528 85 132 1.5E-9 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 Patl_2148 e050dc950ac5d71f8f036f25fd004f7d 133 SUPERFAMILY SSF81273 2 58 1.96E-12 T 11-10-2018 Patl_2148 e050dc950ac5d71f8f036f25fd004f7d 133 Gene3D G3DSA:1.10.287.1050 1 83 1.2E-18 T 11-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 Patl_2148 e050dc950ac5d71f8f036f25fd004f7d 133 Gene3D G3DSA:4.10.430.10 89 133 4.2E-16 T 11-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 Patl_1673 cf9a0cbf47097ccce34c7a34ef7196c1 302 SUPERFAMILY SSF53850 90 300 1.99E-38 T 11-10-2018 Patl_1673 cf9a0cbf47097ccce34c7a34ef7196c1 302 SUPERFAMILY SSF46785 4 86 2.28E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1673 cf9a0cbf47097ccce34c7a34ef7196c1 302 Gene3D G3DSA:3.40.190.10 92 294 4.9E-51 T 11-10-2018 Patl_1673 cf9a0cbf47097ccce34c7a34ef7196c1 302 Gene3D G3DSA:1.10.10.10 3 88 2.5E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1673 cf9a0cbf47097ccce34c7a34ef7196c1 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.2E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1673 cf9a0cbf47097ccce34c7a34ef7196c1 302 Gene3D G3DSA:3.40.190.10 163 268 4.9E-51 T 11-10-2018 Patl_1673 cf9a0cbf47097ccce34c7a34ef7196c1 302 Pfam PF03466 LysR substrate binding domain 90 296 7.0E-36 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_3871 d0dc4df1495a52a309cc1298b9f86e8e 70 SUPERFAMILY SSF47413 5 69 1.8E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_3871 d0dc4df1495a52a309cc1298b9f86e8e 70 Gene3D G3DSA:1.10.260.40 6 70 1.7E-27 T 11-10-2018 Patl_3871 d0dc4df1495a52a309cc1298b9f86e8e 70 Pfam PF01381 Helix-turn-helix 19 65 1.7E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_3871 d0dc4df1495a52a309cc1298b9f86e8e 70 SMART SM00530 9 65 2.9E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_3508 3c79c37a5983fe1570d6e55500fc90de 218 SUPERFAMILY SSF75445 127 198 8.76E-25 T 11-10-2018 Patl_3508 3c79c37a5983fe1570d6e55500fc90de 218 SUPERFAMILY SSF100950 1 146 8.37E-47 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Patl_3508 3c79c37a5983fe1570d6e55500fc90de 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 9.8E-68 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Patl_3508 3c79c37a5983fe1570d6e55500fc90de 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.298 T 11-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Patl_3508 3c79c37a5983fe1570d6e55500fc90de 218 Gene3D G3DSA:3.30.70.260 125 196 2.3E-75 T 11-10-2018 Patl_3508 3c79c37a5983fe1570d6e55500fc90de 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 6.6E-58 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 Patl_3508 3c79c37a5983fe1570d6e55500fc90de 218 Gene3D G3DSA:3.40.50.1360 7 207 2.3E-75 T 11-10-2018 Patl_1418 276ecab79f1b778c40c3cb8fdb1413ba 222 SUPERFAMILY SSF48008 78 213 3.92E-27 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_1418 276ecab79f1b778c40c3cb8fdb1413ba 222 SMART SM00345 15 73 3.0E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_1418 276ecab79f1b778c40c3cb8fdb1413ba 222 SMART SM00895 83 208 2.8E-24 T 11-10-2018 IPR011711 GntR, C-terminal Patl_1418 276ecab79f1b778c40c3cb8fdb1413ba 222 Gene3D G3DSA:1.20.120.530 76 217 6.7E-29 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_1418 276ecab79f1b778c40c3cb8fdb1413ba 222 Pfam PF07729 FCD domain 83 206 1.8E-24 T 11-10-2018 IPR011711 GntR, C-terminal Patl_1418 276ecab79f1b778c40c3cb8fdb1413ba 222 Gene3D G3DSA:1.10.10.10 2 73 1.2E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1418 276ecab79f1b778c40c3cb8fdb1413ba 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 73 2.4E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_1418 276ecab79f1b778c40c3cb8fdb1413ba 222 SUPERFAMILY SSF46785 9 102 5.07E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1865 80bede568e5a82ad4a509d405c93831a 256 Gene3D G3DSA:1.10.3720.10 57 246 1.0E-25 T 11-10-2018 IPR035906 MetI-like superfamily Patl_1865 80bede568e5a82ad4a509d405c93831a 256 SUPERFAMILY SSF161098 55 236 4.97E-30 T 11-10-2018 IPR035906 MetI-like superfamily Patl_1865 80bede568e5a82ad4a509d405c93831a 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 238 1.6E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Patl_0601 9fb370ecbe08eab270adce275226a6aa 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.85 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Patl_0601 9fb370ecbe08eab270adce275226a6aa 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.3E-66 T 11-10-2018 IPR023798 Ribosomal protein S7 domain Patl_0601 9fb370ecbe08eab270adce275226a6aa 156 PIRSF PIRSF002122 3 156 3.0E-61 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Patl_0601 9fb370ecbe08eab270adce275226a6aa 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0601 9fb370ecbe08eab270adce275226a6aa 156 Gene3D G3DSA:1.10.455.10 2 155 2.4E-63 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Patl_0601 9fb370ecbe08eab270adce275226a6aa 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 7.1E-70 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Patl_0601 9fb370ecbe08eab270adce275226a6aa 156 SUPERFAMILY SSF47973 6 149 4.71E-60 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Patl_1757 8d59c459de03c6f4a73c902ccfcb1aca 1320 Gene3D G3DSA:1.10.486.10 599 744 3.7E-133 T 11-10-2018 Patl_1757 8d59c459de03c6f4a73c902ccfcb1aca 1320 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 452 2.8E-56 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Patl_1757 8d59c459de03c6f4a73c902ccfcb1aca 1320 Gene3D G3DSA:1.10.3170.10 146 339 4.1E-115 T 11-10-2018 Patl_1757 8d59c459de03c6f4a73c902ccfcb1aca 1320 SUPERFAMILY SSF52980 1032 1284 1.98E-67 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Patl_1757 8d59c459de03c6f4a73c902ccfcb1aca 1320 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 2 1283 20.963 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 Patl_1757 8d59c459de03c6f4a73c902ccfcb1aca 1320 Gene3D G3DSA:3.40.50.300 463 857 3.7E-133 T 11-10-2018 Patl_1757 8d59c459de03c6f4a73c902ccfcb1aca 1320 Gene3D G3DSA:3.40.50.300 4 451 4.1E-115 T 11-10-2018 Patl_1757 8d59c459de03c6f4a73c902ccfcb1aca 1320 SUPERFAMILY SSF52540 12 836 4.29E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1757 8d59c459de03c6f4a73c902ccfcb1aca 1320 Pfam PF13361 UvrD-like helicase C-terminal domain 461 830 2.0E-18 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Patl_1757 8d59c459de03c6f4a73c902ccfcb1aca 1320 Gene3D G3DSA:3.90.320.10 1006 1289 2.7E-82 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Patl_1757 8d59c459de03c6f4a73c902ccfcb1aca 1320 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1053 1259 1.1E-5 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Patl_1757 8d59c459de03c6f4a73c902ccfcb1aca 1320 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 4 1282 4.3E-274 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 Patl_1278 d033b21a27b3b5ac2b100d8b1ec027c1 357 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 146 316 6.9E-28 T 11-10-2018 Patl_1278 d033b21a27b3b5ac2b100d8b1ec027c1 357 SUPERFAMILY SSF56784 146 349 1.33E-46 T 11-10-2018 IPR036412 HAD-like superfamily Patl_1278 d033b21a27b3b5ac2b100d8b1ec027c1 357 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 140 348 3.9E-82 T 11-10-2018 Patl_1278 d033b21a27b3b5ac2b100d8b1ec027c1 357 Pfam PF12710 haloacid dehalogenase-like hydrolase 149 314 6.0E-15 T 11-10-2018 Patl_1278 d033b21a27b3b5ac2b100d8b1ec027c1 357 Gene3D G3DSA:3.40.50.1000 60 350 1.6E-74 T 11-10-2018 IPR023214 HAD superfamily Patl_1712 3b8904886a6c0c3478e690e5e3ace053 520 Pfam PF12848 ABC transporter 216 301 5.1E-20 T 11-10-2018 IPR032781 ABC-transporter extension domain Patl_1712 3b8904886a6c0c3478e690e5e3ace053 520 Gene3D G3DSA:3.40.50.300 2 271 9.9E-55 T 11-10-2018 Patl_1712 3b8904886a6c0c3478e690e5e3ace053 520 Pfam PF00005 ABC transporter 327 458 8.8E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1712 3b8904886a6c0c3478e690e5e3ace053 520 SUPERFAMILY SSF52540 289 514 2.98E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1712 3b8904886a6c0c3478e690e5e3ace053 520 Gene3D G3DSA:3.40.50.300 274 519 4.1E-50 T 11-10-2018 Patl_1712 3b8904886a6c0c3478e690e5e3ace053 520 Pfam PF00005 ABC transporter 10 176 6.9E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1712 3b8904886a6c0c3478e690e5e3ace053 520 SUPERFAMILY SSF52540 2 229 5.41E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1712 3b8904886a6c0c3478e690e5e3ace053 520 SMART SM00382 18 220 1.4E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1712 3b8904886a6c0c3478e690e5e3ace053 520 SMART SM00382 335 503 5.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0049 49b8f9320b39b6d67ebccf7636043187 51 Pfam PF00471 Ribosomal protein L33 4 49 6.5E-18 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0049 49b8f9320b39b6d67ebccf7636043187 51 Gene3D G3DSA:2.20.28.120 1 51 6.6E-28 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0049 49b8f9320b39b6d67ebccf7636043187 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0049 49b8f9320b39b6d67ebccf7636043187 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 14.964 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0049 49b8f9320b39b6d67ebccf7636043187 51 SUPERFAMILY SSF57829 1 49 2.38E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Patl_0049 49b8f9320b39b6d67ebccf7636043187 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 8.3E-23 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2022 a595accf239641845e301a66c949dddd 650 SUPERFAMILY SSF56349 301 479 4.41E-18 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Patl_2022 a595accf239641845e301a66c949dddd 650 Gene3D G3DSA:1.10.443.10 296 471 2.9E-17 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Patl_2022 a595accf239641845e301a66c949dddd 650 Pfam PF00589 Phage integrase family 304 466 1.1E-12 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Patl_3919 bfc4ddadbb3617e06913b4cb6d5e7302 750 Gene3D G3DSA:2.60.40.1190 100 292 2.7E-11 T 11-10-2018 Patl_3919 bfc4ddadbb3617e06913b4cb6d5e7302 750 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 637 743 4.2E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3919 bfc4ddadbb3617e06913b4cb6d5e7302 750 Gene3D G3DSA:1.10.287.130 473 585 2.6E-14 T 11-10-2018 Patl_3919 bfc4ddadbb3617e06913b4cb6d5e7302 750 SUPERFAMILY SSF55874 577 731 1.26E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3919 bfc4ddadbb3617e06913b4cb6d5e7302 750 SUPERFAMILY SSF49344 99 275 1.41E-8 T 11-10-2018 Patl_3919 bfc4ddadbb3617e06913b4cb6d5e7302 750 TIGRFAM TIGR03785 marine_sort_HK: proteobacterial dedicated sortase system histidine kinase 28 743 0.0 T 11-10-2018 IPR022510 Sortase system, histidine kinase Patl_3919 bfc4ddadbb3617e06913b4cb6d5e7302 750 Gene3D G3DSA:3.30.565.10 586 744 7.3E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3919 bfc4ddadbb3617e06913b4cb6d5e7302 750 SUPERFAMILY SSF47384 506 586 1.57E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_3919 bfc4ddadbb3617e06913b4cb6d5e7302 750 SMART SM00388 523 588 2.1E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3919 bfc4ddadbb3617e06913b4cb6d5e7302 750 Pfam PF00512 His Kinase A (phospho-acceptor) domain 524 587 2.5E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3919 bfc4ddadbb3617e06913b4cb6d5e7302 750 SMART SM00387 632 749 8.1E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1230 2fc89b574d75d79372c50e86bcb2e1a3 614 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 344 593 1.4E-82 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Patl_1230 2fc89b574d75d79372c50e86bcb2e1a3 614 SUPERFAMILY SSF82866 409 604 4.05E-46 T 11-10-2018 Patl_1230 2fc89b574d75d79372c50e86bcb2e1a3 614 Gene3D G3DSA:3.30.70.3400 220 436 2.2E-48 T 11-10-2018 Patl_1230 2fc89b574d75d79372c50e86bcb2e1a3 614 Gene3D G3DSA:3.30.1360.200 277 430 2.2E-48 T 11-10-2018 Patl_1230 2fc89b574d75d79372c50e86bcb2e1a3 614 Pfam PF13721 SecD export protein N-terminal TM region 2 103 2.4E-34 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain Patl_1230 2fc89b574d75d79372c50e86bcb2e1a3 614 Gene3D G3DSA:1.20.1640.10 450 600 6.7E-9 T 11-10-2018 Patl_1230 2fc89b574d75d79372c50e86bcb2e1a3 614 Pfam PF07549 SecD/SecF GG Motif 115 140 1.3E-6 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Patl_1230 2fc89b574d75d79372c50e86bcb2e1a3 614 Pfam PF02355 Protein export membrane protein 432 603 2.0E-21 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Patl_1230 2fc89b574d75d79372c50e86bcb2e1a3 614 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 614 47.304 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Patl_1230 2fc89b574d75d79372c50e86bcb2e1a3 614 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 600 1.1E-149 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Patl_0015 919f984111717c6537972ecf689ed1ee 928 Pfam PF00476 DNA polymerase family A 549 925 7.6E-154 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_0015 919f984111717c6537972ecf689ed1ee 928 Gene3D G3DSA:1.20.1060.10 542 657 5.6E-42 T 11-10-2018 Patl_0015 919f984111717c6537972ecf689ed1ee 928 SMART SM00475 15 276 8.6E-125 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Patl_0015 919f984111717c6537972ecf689ed1ee 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 677 692 1.7E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_0015 919f984111717c6537972ecf689ed1ee 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 875 888 1.7E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_0015 919f984111717c6537972ecf689ed1ee 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 699 722 1.7E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_0015 919f984111717c6537972ecf689ed1ee 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 790 801 1.7E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_0015 919f984111717c6537972ecf689ed1ee 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 729 742 1.7E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_0015 919f984111717c6537972ecf689ed1ee 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 654 676 1.7E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_0015 919f984111717c6537972ecf689ed1ee 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 753 778 1.7E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_0015 919f984111717c6537972ecf689ed1ee 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 812 823 1.7E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_0015 919f984111717c6537972ecf689ed1ee 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 844 860 1.7E-80 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_0015 919f984111717c6537972ecf689ed1ee 928 Gene3D G3DSA:1.10.150.20 708 851 1.9E-110 T 11-10-2018 Patl_0015 919f984111717c6537972ecf689ed1ee 928 SUPERFAMILY SSF56672 521 928 8.12E-157 T 11-10-2018 Patl_0015 919f984111717c6537972ecf689ed1ee 928 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 17 178 8.2E-56 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Patl_0015 919f984111717c6537972ecf689ed1ee 928 Gene3D G3DSA:3.40.50.1010 18 292 2.1E-95 T 11-10-2018 Patl_0015 919f984111717c6537972ecf689ed1ee 928 SUPERFAMILY SSF47807 179 298 2.84E-28 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Patl_0015 919f984111717c6537972ecf689ed1ee 928 SUPERFAMILY SSF53098 332 517 3.98E-57 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_0015 919f984111717c6537972ecf689ed1ee 928 TIGRFAM TIGR00593 pola: DNA polymerase I 18 928 1.5E-285 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_0015 919f984111717c6537972ecf689ed1ee 928 Gene3D G3DSA:3.30.420.10 326 541 2.6E-69 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Patl_0015 919f984111717c6537972ecf689ed1ee 928 SMART SM00474 329 516 7.6E-42 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Patl_0015 919f984111717c6537972ecf689ed1ee 928 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 179 274 2.5E-26 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Patl_0015 919f984111717c6537972ecf689ed1ee 928 ProSitePatterns PS00447 DNA polymerase family A signature. 753 772 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_0015 919f984111717c6537972ecf689ed1ee 928 SMART SM00279 181 216 1.2E-10 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Patl_0015 919f984111717c6537972ecf689ed1ee 928 SUPERFAMILY SSF88723 14 178 1.68E-57 T 11-10-2018 IPR029060 PIN-like domain superfamily Patl_0015 919f984111717c6537972ecf689ed1ee 928 Gene3D G3DSA:1.10.150.20 182 261 2.1E-95 T 11-10-2018 Patl_0015 919f984111717c6537972ecf689ed1ee 928 Pfam PF01612 3'-5' exonuclease 329 515 2.5E-40 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Patl_0015 919f984111717c6537972ecf689ed1ee 928 Gene3D G3DSA:3.30.70.370 663 924 1.9E-110 T 11-10-2018 Patl_0015 919f984111717c6537972ecf689ed1ee 928 SMART SM00482 685 892 1.2E-117 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_2229 745d6db8de6c5dfa8a714b315d297c55 405 Gene3D G3DSA:1.10.287.470 108 167 8.7E-71 T 11-10-2018 Patl_2229 745d6db8de6c5dfa8a714b315d297c55 405 Gene3D G3DSA:2.40.50.100 73 203 8.7E-71 T 11-10-2018 Patl_2229 745d6db8de6c5dfa8a714b315d297c55 405 Gene3D G3DSA:2.40.30.170 63 286 8.7E-71 T 11-10-2018 Patl_2229 745d6db8de6c5dfa8a714b315d297c55 405 Gene3D G3DSA:2.40.420.20 287 354 8.7E-71 T 11-10-2018 Patl_2229 745d6db8de6c5dfa8a714b315d297c55 405 SUPERFAMILY SSF111369 65 281 6.02E-38 T 11-10-2018 Patl_2229 745d6db8de6c5dfa8a714b315d297c55 405 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 58 356 5.9E-71 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Patl_2229 745d6db8de6c5dfa8a714b315d297c55 405 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 276 1.1E-24 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Patl_2478 caf7cb4653b59e58f83a254d87402b37 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 3.7E-32 T 11-10-2018 IPR002220 DapA-like GO:0016829 Patl_2478 caf7cb4653b59e58f83a254d87402b37 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 3.7E-32 T 11-10-2018 IPR002220 DapA-like GO:0016829 Patl_2478 caf7cb4653b59e58f83a254d87402b37 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 3.7E-32 T 11-10-2018 IPR002220 DapA-like GO:0016829 Patl_2478 caf7cb4653b59e58f83a254d87402b37 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 3.7E-32 T 11-10-2018 IPR002220 DapA-like GO:0016829 Patl_2478 caf7cb4653b59e58f83a254d87402b37 293 Gene3D G3DSA:3.20.20.70 1 292 6.8E-105 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2478 caf7cb4653b59e58f83a254d87402b37 293 PIRSF PIRSF001365 1 293 4.5E-87 T 11-10-2018 IPR002220 DapA-like GO:0016829 Patl_2478 caf7cb4653b59e58f83a254d87402b37 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 63.992 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Patl_2478 caf7cb4653b59e58f83a254d87402b37 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 287 3.4E-106 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Patl_2478 caf7cb4653b59e58f83a254d87402b37 293 Pfam PF00701 Dihydrodipicolinate synthetase family 2 286 6.6E-99 T 11-10-2018 IPR002220 DapA-like GO:0016829 Patl_2478 caf7cb4653b59e58f83a254d87402b37 293 SMART SM01130 1 290 1.9E-130 T 11-10-2018 IPR002220 DapA-like GO:0016829 Patl_2478 caf7cb4653b59e58f83a254d87402b37 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Patl_2478 caf7cb4653b59e58f83a254d87402b37 293 SUPERFAMILY SSF51569 1 291 1.99E-96 T 11-10-2018 Patl_2478 caf7cb4653b59e58f83a254d87402b37 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Patl_2385 7641d179cf19e63e2a6eb10c6128f427 272 Gene3D G3DSA:2.40.50.40 165 234 1.1E-14 T 11-10-2018 Patl_2385 7641d179cf19e63e2a6eb10c6128f427 272 SMART SM00448 3 115 3.9E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2385 7641d179cf19e63e2a6eb10c6128f427 272 SUPERFAMILY SSF52172 4 129 2.13E-32 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2385 7641d179cf19e63e2a6eb10c6128f427 272 Gene3D G3DSA:3.40.50.2300 1 135 3.6E-33 T 11-10-2018 Patl_2385 7641d179cf19e63e2a6eb10c6128f427 272 SMART SM00850 174 271 7.3E-35 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Patl_2385 7641d179cf19e63e2a6eb10c6128f427 272 Pfam PF00072 Response regulator receiver domain 6 115 1.0E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2385 7641d179cf19e63e2a6eb10c6128f427 272 Pfam PF04397 LytTr DNA-binding domain 176 270 4.4E-24 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Patl_3937 7342bfc3f69d7e52996e3e63ce0b4697 149 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 112 136 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Patl_3937 7342bfc3f69d7e52996e3e63ce0b4697 149 Gene3D G3DSA:1.20.120.910 19 148 1.8E-35 T 11-10-2018 Patl_3937 7342bfc3f69d7e52996e3e63ce0b4697 149 SUPERFAMILY SSF57716 109 147 3.28E-9 T 11-10-2018 Patl_3937 7342bfc3f69d7e52996e3e63ce0b4697 149 SUPERFAMILY SSF109635 8 108 3.01E-36 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily Patl_3937 7342bfc3f69d7e52996e3e63ce0b4697 149 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 30 138 7.2E-51 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Patl_3937 7342bfc3f69d7e52996e3e63ce0b4697 149 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 109 141 1.2E-9 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Patl_3937 7342bfc3f69d7e52996e3e63ce0b4697 149 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 26 148 29.239 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 Patl_0076 ca97cc50c8d3d41cd3250b432f55f808 354 Pfam PF14815 NUDIX domain 240 348 9.4E-20 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Patl_0076 ca97cc50c8d3d41cd3250b432f55f808 354 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 197 213 4.8E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Patl_0076 ca97cc50c8d3d41cd3250b432f55f808 354 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 40 172 4.9E-19 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Patl_0076 ca97cc50c8d3d41cd3250b432f55f808 354 SUPERFAMILY SSF48150 9 230 1.22E-76 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Patl_0076 ca97cc50c8d3d41cd3250b432f55f808 354 Gene3D G3DSA:1.10.1670.10 14 216 3.4E-88 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Patl_0076 ca97cc50c8d3d41cd3250b432f55f808 354 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 11 280 2.7E-116 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 Patl_0076 ca97cc50c8d3d41cd3250b432f55f808 354 ProSitePatterns PS01155 Endonuclease III family signature. 107 134 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Patl_0076 ca97cc50c8d3d41cd3250b432f55f808 354 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 197 213 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Patl_0076 ca97cc50c8d3d41cd3250b432f55f808 354 Pfam PF00633 Helix-hairpin-helix motif 104 132 2.0E-6 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Patl_0076 ca97cc50c8d3d41cd3250b432f55f808 354 Gene3D G3DSA:3.90.79.10 227 353 4.7E-13 T 11-10-2018 Patl_0076 ca97cc50c8d3d41cd3250b432f55f808 354 Gene3D G3DSA:1.10.340.30 26 137 3.4E-88 T 11-10-2018 Patl_0076 ca97cc50c8d3d41cd3250b432f55f808 354 SMART SM00525 196 216 9.6E-5 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Patl_0076 ca97cc50c8d3d41cd3250b432f55f808 354 SMART SM00478 44 195 4.0E-44 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Patl_0076 ca97cc50c8d3d41cd3250b432f55f808 354 SUPERFAMILY SSF55811 225 349 3.89E-22 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Patl_1219 5ce872d905579844650dcc6b0f4513d6 387 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 8.7E-158 T 11-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain Patl_1219 5ce872d905579844650dcc6b0f4513d6 387 Gene3D G3DSA:3.30.1490.330 264 345 7.1E-28 T 11-10-2018 Patl_1219 5ce872d905579844650dcc6b0f4513d6 387 SUPERFAMILY SSF56059 1 385 4.59E-88 T 11-10-2018 Patl_1219 5ce872d905579844650dcc6b0f4513d6 387 SUPERFAMILY SSF52440 175 280 2.36E-41 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Patl_0086 dbc6528858cb6f9783a3e3a5472dd129 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 209 43.524 T 11-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Patl_0086 dbc6528858cb6f9783a3e3a5472dd129 209 SUPERFAMILY SSF53271 4 207 9.44E-64 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Patl_0086 dbc6528858cb6f9783a3e3a5472dd129 209 Gene3D G3DSA:3.40.50.2020 2 209 1.4E-71 T 11-10-2018 Patl_0086 dbc6528858cb6f9783a3e3a5472dd129 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 1.4E-87 T 11-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Patl_0086 dbc6528858cb6f9783a3e3a5472dd129 209 Pfam PF14681 Uracil phosphoribosyltransferase 7 208 3.6E-65 T 11-10-2018 Patl_0406 f560035bf2807374e88e1bcbcd379d0f 180 Pfam PF02635 DsrE/DsrF-like family 57 177 4.7E-16 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Patl_0406 f560035bf2807374e88e1bcbcd379d0f 180 Gene3D G3DSA:3.40.1260.10 61 177 1.3E-8 T 11-10-2018 IPR027396 DsrEFH-like Patl_0406 f560035bf2807374e88e1bcbcd379d0f 180 SUPERFAMILY SSF75169 53 180 9.13E-21 T 11-10-2018 IPR027396 DsrEFH-like Patl_3578 6dc006538ca379c5192ca95bf956d700 427 SUPERFAMILY SSF53686 3 426 2.36E-132 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Patl_3578 6dc006538ca379c5192ca95bf956d700 427 TIGRFAM TIGR00260 thrC: threonine synthase 52 391 1.7E-108 T 11-10-2018 IPR004450 Threonine synthase-like Patl_3578 6dc006538ca379c5192ca95bf956d700 427 Gene3D G3DSA:3.40.50.1100 83 392 2.1E-133 T 11-10-2018 Patl_3578 6dc006538ca379c5192ca95bf956d700 427 Pfam PF14821 Threonine synthase N terminus 10 78 1.3E-12 T 11-10-2018 IPR029144 Threonine synthase, N-terminal Patl_3578 6dc006538ca379c5192ca95bf956d700 427 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Patl_3578 6dc006538ca379c5192ca95bf956d700 427 Gene3D G3DSA:3.90.1380.10 1 79 1.0E-27 T 11-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily Patl_3578 6dc006538ca379c5192ca95bf956d700 427 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 91 363 1.4E-23 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Patl_3578 6dc006538ca379c5192ca95bf956d700 427 Gene3D G3DSA:3.40.50.1100 101 398 2.1E-133 T 11-10-2018 Patl_3115 d4f3a39b0d5ea94a78990fe5904d3140 162 Gene3D G3DSA:3.40.140.10 2 162 5.0E-63 T 11-10-2018 Patl_3115 d4f3a39b0d5ea94a78990fe5904d3140 162 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 10 151 45.745 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Patl_3115 d4f3a39b0d5ea94a78990fe5904d3140 162 Pfam PF14437 MafB19-like deaminase 5 151 3.4E-35 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Patl_3115 d4f3a39b0d5ea94a78990fe5904d3140 162 SUPERFAMILY SSF53927 3 155 5.02E-57 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Patl_3115 d4f3a39b0d5ea94a78990fe5904d3140 162 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Patl_1172 d95f56c6ab4a0989b1d177e8a8a2d3a1 281 SUPERFAMILY SSF88713 15 254 5.12E-49 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Patl_1172 d95f56c6ab4a0989b1d177e8a8a2d3a1 281 Pfam PF01522 Polysaccharide deacetylase 39 147 3.7E-24 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Patl_1172 d95f56c6ab4a0989b1d177e8a8a2d3a1 281 Gene3D G3DSA:3.20.20.370 7 262 1.0E-51 T 11-10-2018 Patl_1172 d95f56c6ab4a0989b1d177e8a8a2d3a1 281 TIGRFAM TIGR03006 pepcterm_polyde: polysaccharide deacetylase family protein, PEP-CTERM locus subfamily 7 275 4.5E-127 T 11-10-2018 IPR014344 PEP-CTERM locus, polysaccharide deactylase Patl_1172 d95f56c6ab4a0989b1d177e8a8a2d3a1 281 Pfam PF11959 Domain of unknown function (DUF3473) 149 275 4.9E-50 T 11-10-2018 IPR022560 Domain of unknown function DUF3473 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 Pfam PF00679 Elongation factor G C-terminus 598 683 4.2E-28 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 Gene3D G3DSA:3.30.70.870 430 480 3.5E-22 T 11-10-2018 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 SMART SM00889 477 595 3.6E-60 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 SUPERFAMILY SSF54211 476 596 8.09E-41 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 Gene3D G3DSA:3.30.70.240 601 671 1.0E-82 T 11-10-2018 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 Pfam PF14492 Elongation Factor G, domain II 401 474 6.1E-30 T 11-10-2018 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 Gene3D G3DSA:3.40.50.300 1 290 1.0E-100 T 11-10-2018 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 SUPERFAMILY SSF52540 3 278 1.84E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 100.316 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 SMART SM00838 597 684 1.4E-44 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 Pfam PF03764 Elongation factor G, domain IV 476 594 2.2E-43 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 8.0E-290 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 Pfam PF03144 Elongation factor Tu domain 2 320 388 1.2E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 Gene3D G3DSA:2.40.30.10 291 413 1.1E-39 T 11-10-2018 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 SUPERFAMILY SSF50447 261 399 4.2E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 SUPERFAMILY SSF54980 600 688 6.12E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 278 3.3E-62 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 SUPERFAMILY SSF54980 401 478 3.96E-21 T 11-10-2018 IPR035647 EF-G domain III/V-like Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 4.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 4.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 4.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 4.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 175 6.3E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Patl_0464 a454ccf62634b7d257d2536eeda87d03 695 Gene3D G3DSA:3.30.230.10 481 684 1.0E-82 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Patl_2723 010fcfe646fdee397bc3551505a1bbe2 299 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 2 290 2.2E-72 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Patl_2723 010fcfe646fdee397bc3551505a1bbe2 299 PIRSF PIRSF026649 1 299 7.6E-93 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Patl_2723 010fcfe646fdee397bc3551505a1bbe2 299 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 1 299 41.745 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 Patl_2723 010fcfe646fdee397bc3551505a1bbe2 299 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 2 299 1.6E-99 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 Patl_0409 ef2e8d6b3031467cfca85b67cfadb3c5 155 Gene3D G3DSA:3.30.70.920 60 149 1.7E-20 T 11-10-2018 Patl_0409 ef2e8d6b3031467cfca85b67cfadb3c5 155 Gene3D G3DSA:1.10.10.10 1 59 2.0E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0409 ef2e8d6b3031467cfca85b67cfadb3c5 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 5.4E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_0409 ef2e8d6b3031467cfca85b67cfadb3c5 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 5.4E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_0409 ef2e8d6b3031467cfca85b67cfadb3c5 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 5.4E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_0409 ef2e8d6b3031467cfca85b67cfadb3c5 155 SMART SM00344 6 112 1.1E-31 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Patl_0409 ef2e8d6b3031467cfca85b67cfadb3c5 155 SUPERFAMILY SSF54909 66 149 1.33E-18 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_0409 ef2e8d6b3031467cfca85b67cfadb3c5 155 SUPERFAMILY SSF46785 5 65 1.35E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0409 ef2e8d6b3031467cfca85b67cfadb3c5 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 4.6E-12 T 11-10-2018 Patl_0409 ef2e8d6b3031467cfca85b67cfadb3c5 155 Pfam PF01037 Lrp/AsnC ligand binding domain 72 141 2.5E-19 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Patl_3023 2c1682153a8c82d279733ceb89447dd3 164 Pfam PF01584 CheW-like domain 20 156 4.6E-40 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Patl_3023 2c1682153a8c82d279733ceb89447dd3 164 Gene3D G3DSA:2.40.50.180 39 148 3.4E-42 T 11-10-2018 Patl_3023 2c1682153a8c82d279733ceb89447dd3 164 SUPERFAMILY SSF50341 14 159 2.49E-42 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Patl_3023 2c1682153a8c82d279733ceb89447dd3 164 Gene3D G3DSA:2.30.30.40 22 147 3.4E-42 T 11-10-2018 Patl_3023 2c1682153a8c82d279733ceb89447dd3 164 SMART SM00260 16 153 6.1E-49 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Patl_3160 0ccfb68f6a757ba0a12845540d1c0f1a 319 SUPERFAMILY SSF101790 238 319 1.37E-19 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Patl_3160 0ccfb68f6a757ba0a12845540d1c0f1a 319 Gene3D G3DSA:3.30.70.1400 22 109 3.5E-41 T 11-10-2018 Patl_3160 0ccfb68f6a757ba0a12845540d1c0f1a 319 SUPERFAMILY SSF103025 11 237 3.3E-51 T 11-10-2018 Patl_3160 0ccfb68f6a757ba0a12845540d1c0f1a 319 Gene3D G3DSA:3.30.70.1630 19 188 3.5E-41 T 11-10-2018 Patl_3160 0ccfb68f6a757ba0a12845540d1c0f1a 319 Gene3D G3DSA:2.40.30.160 191 311 7.5E-38 T 11-10-2018 Patl_3160 0ccfb68f6a757ba0a12845540d1c0f1a 319 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 182 246 6.0E-27 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site Patl_3160 0ccfb68f6a757ba0a12845540d1c0f1a 319 Pfam PF01571 Aminomethyltransferase folate-binding domain 24 141 1.5E-5 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Patl_1987 219c6305dce313460fd9edff7b3d1474 639 Pfam PF00012 Hsp70 protein 4 601 1.3E-260 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 Gene3D G3DSA:1.20.1270.10 524 603 3.5E-24 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 SUPERFAMILY SSF100920 384 540 6.02E-61 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 Gene3D G3DSA:3.30.420.40 5 379 5.2E-165 T 11-10-2018 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 Gene3D G3DSA:3.30.420.40 180 366 5.2E-165 T 11-10-2018 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 SUPERFAMILY SSF53067 187 382 9.18E-67 T 11-10-2018 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 2.9E-286 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 SUPERFAMILY SSF100934 507 605 5.1E-14 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 PRINTS PR00301 70kDa heat shock protein signature 198 208 9.7E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 PRINTS PR00301 70kDa heat shock protein signature 54 62 9.7E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 PRINTS PR00301 70kDa heat shock protein signature 3 16 9.7E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 PRINTS PR00301 70kDa heat shock protein signature 365 385 9.7E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 PRINTS PR00301 70kDa heat shock protein signature 31 43 9.7E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 PRINTS PR00301 70kDa heat shock protein signature 138 158 9.7E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 PRINTS PR00301 70kDa heat shock protein signature 334 350 9.7E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 PRINTS PR00301 70kDa heat shock protein signature 388 407 9.7E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 PRINTS PR00301 70kDa heat shock protein signature 469 485 9.7E-80 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 SUPERFAMILY SSF53067 4 184 4.03E-64 T 11-10-2018 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 Gene3D G3DSA:2.60.34.10 383 523 9.5E-65 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 36.279 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Patl_1987 219c6305dce313460fd9edff7b3d1474 639 Gene3D G3DSA:3.90.640.10 229 316 5.2E-165 T 11-10-2018 Patl_2633 5557f6a83d153349ad4a638c3be9e92f 306 SUPERFAMILY SSF51197 100 277 6.5E-12 T 11-10-2018 Patl_2633 5557f6a83d153349ad4a638c3be9e92f 306 SMART SM00702 94 271 0.0048 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 Patl_2633 5557f6a83d153349ad4a638c3be9e92f 306 Gene3D G3DSA:2.60.120.620 159 271 1.5E-10 T 11-10-2018 Patl_3177 06050cea2a347301ff320fe663bc97fb 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 3.0E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Patl_3177 06050cea2a347301ff320fe663bc97fb 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 3.0E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Patl_3177 06050cea2a347301ff320fe663bc97fb 164 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 3.0E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Patl_3177 06050cea2a347301ff320fe663bc97fb 164 Pfam PF01252 Signal peptidase (SPase) II 16 156 3.6E-39 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Patl_3177 06050cea2a347301ff320fe663bc97fb 164 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Patl_3177 06050cea2a347301ff320fe663bc97fb 164 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 17.232 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Patl_3177 06050cea2a347301ff320fe663bc97fb 164 TIGRFAM TIGR00077 lspA: signal peptidase II 5 161 1.6E-45 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Patl_0905 4d24379222510e6267d88245d2e74a55 117 Pfam PF13411 MerR HTH family regulatory protein 3 67 6.3E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_0905 4d24379222510e6267d88245d2e74a55 117 SUPERFAMILY SSF46955 3 107 2.6E-23 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Patl_0905 4d24379222510e6267d88245d2e74a55 117 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 2.9E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_0905 4d24379222510e6267d88245d2e74a55 117 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.9E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_0905 4d24379222510e6267d88245d2e74a55 117 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.9E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_0905 4d24379222510e6267d88245d2e74a55 117 Gene3D G3DSA:1.10.1660.10 2 117 9.0E-23 T 11-10-2018 Patl_0905 4d24379222510e6267d88245d2e74a55 117 SMART SM00422 1 69 4.9E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_0853 b6062d66eaff1cd9791f50a6cd09366a 302 Pfam PF03466 LysR substrate binding domain 95 294 2.5E-12 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_0853 b6062d66eaff1cd9791f50a6cd09366a 302 Gene3D G3DSA:1.10.10.10 1 86 1.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0853 b6062d66eaff1cd9791f50a6cd09366a 302 SUPERFAMILY SSF46785 3 81 1.09E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0853 b6062d66eaff1cd9791f50a6cd09366a 302 SUPERFAMILY SSF53850 91 297 9.59E-37 T 11-10-2018 Patl_0853 b6062d66eaff1cd9791f50a6cd09366a 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.3E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0853 b6062d66eaff1cd9791f50a6cd09366a 302 Gene3D G3DSA:3.40.190.10 170 269 1.4E-46 T 11-10-2018 Patl_0853 b6062d66eaff1cd9791f50a6cd09366a 302 Gene3D G3DSA:3.40.190.10 92 293 1.4E-46 T 11-10-2018 Patl_2101 cbb8508786c61c15cdccaccd464cca67 154 SUPERFAMILY SSF46626 16 140 3.48E-13 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_2101 cbb8508786c61c15cdccaccd464cca67 154 Gene3D G3DSA:1.10.760.10 1 142 4.7E-10 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_2101 cbb8508786c61c15cdccaccd464cca67 154 Pfam PF00034 Cytochrome c 37 135 6.4E-5 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_0020 0f60804b63e12249ecb024988e615401 459 SUPERFAMILY SSF51735 233 376 1.88E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0020 0f60804b63e12249ecb024988e615401 459 Gene3D G3DSA:3.30.70.1450 367 458 1.5E-29 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Patl_0020 0f60804b63e12249ecb024988e615401 459 Pfam PF02080 TrkA-C domain 391 451 1.8E-10 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Patl_0020 0f60804b63e12249ecb024988e615401 459 Pfam PF02080 TrkA-C domain 156 225 1.2E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Patl_0020 0f60804b63e12249ecb024988e615401 459 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 7.7E-29 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Patl_0020 0f60804b63e12249ecb024988e615401 459 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 7.7E-29 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Patl_0020 0f60804b63e12249ecb024988e615401 459 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 7.7E-29 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Patl_0020 0f60804b63e12249ecb024988e615401 459 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 7.7E-29 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Patl_0020 0f60804b63e12249ecb024988e615401 459 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 7.7E-29 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Patl_0020 0f60804b63e12249ecb024988e615401 459 SUPERFAMILY SSF116726 361 437 3.66E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Patl_0020 0f60804b63e12249ecb024988e615401 459 SUPERFAMILY SSF51735 1 151 6.82E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0020 0f60804b63e12249ecb024988e615401 459 Gene3D G3DSA:3.30.70.1450 140 232 5.8E-21 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Patl_0020 0f60804b63e12249ecb024988e615401 459 SUPERFAMILY SSF116726 147 226 8.5E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Patl_0020 0f60804b63e12249ecb024988e615401 459 Pfam PF02254 TrkA-N domain 3 113 3.5E-28 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Patl_0020 0f60804b63e12249ecb024988e615401 459 Pfam PF02254 TrkA-N domain 235 350 4.3E-23 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Patl_0020 0f60804b63e12249ecb024988e615401 459 Gene3D G3DSA:3.40.50.720 233 366 1.9E-36 T 11-10-2018 Patl_0020 0f60804b63e12249ecb024988e615401 459 Gene3D G3DSA:3.40.50.720 2 139 1.0E-48 T 11-10-2018 Patl_2340 e0a13876e748953f41b9f89d6102a579 650 SMART SM00642 64 513 1.1E-7 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_2340 e0a13876e748953f41b9f89d6102a579 650 Gene3D G3DSA:3.20.20.80 24 202 8.8E-25 T 11-10-2018 Patl_2340 e0a13876e748953f41b9f89d6102a579 650 Gene3D G3DSA:3.20.20.80 285 515 1.3E-40 T 11-10-2018 Patl_2340 e0a13876e748953f41b9f89d6102a579 650 SUPERFAMILY SSF51011 565 646 5.04E-6 T 11-10-2018 Patl_2340 e0a13876e748953f41b9f89d6102a579 650 SUPERFAMILY SSF51445 60 537 2.05E-85 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_2340 e0a13876e748953f41b9f89d6102a579 650 Gene3D G3DSA:2.60.40.1180 556 647 6.0E-6 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_2340 e0a13876e748953f41b9f89d6102a579 650 Pfam PF00128 Alpha amylase, catalytic domain 97 481 5.4E-26 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_3577 d4573e31133afd8aa212516c1fda0646 222 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 11-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Patl_3577 d4573e31133afd8aa212516c1fda0646 222 SMART SM00987 49 210 5.1E-37 T 11-10-2018 Patl_3577 d4573e31133afd8aa212516c1fda0646 222 SMART SM00986 49 210 5.1E-37 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Patl_3577 d4573e31133afd8aa212516c1fda0646 222 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 39.319 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Patl_3577 d4573e31133afd8aa212516c1fda0646 222 SUPERFAMILY SSF52141 5 222 5.67E-93 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Patl_3577 d4573e31133afd8aa212516c1fda0646 222 Gene3D G3DSA:3.40.470.10 1 222 3.3E-101 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Patl_3577 d4573e31133afd8aa212516c1fda0646 222 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 212 2.2E-86 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Patl_3577 d4573e31133afd8aa212516c1fda0646 222 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 7.7E-24 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Patl_1041 0219c571b8c058f9f519a8d26c001f6e 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.259 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1041 0219c571b8c058f9f519a8d26c001f6e 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.7E-24 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1041 0219c571b8c058f9f519a8d26c001f6e 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1041 0219c571b8c058f9f519a8d26c001f6e 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 8.0E-9 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1041 0219c571b8c058f9f519a8d26c001f6e 71 Pfam PF01165 Ribosomal protein S21 4 56 1.1E-22 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1041 0219c571b8c058f9f519a8d26c001f6e 71 Gene3D G3DSA:1.20.5.1150 16 54 1.3E-20 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1041 0219c571b8c058f9f519a8d26c001f6e 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 4.1E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1041 0219c571b8c058f9f519a8d26c001f6e 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 4.1E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1041 0219c571b8c058f9f519a8d26c001f6e 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 4.1E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1041 0219c571b8c058f9f519a8d26c001f6e 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 4.1E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0973 6d7554b173a3345ac433e133576569fa 317 Pfam PF02685 Glucokinase 6 314 2.1E-108 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 Patl_0973 6d7554b173a3345ac433e133576569fa 317 TIGRFAM TIGR00749 glk: glucokinase 6 307 1.4E-97 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 Patl_0973 6d7554b173a3345ac433e133576569fa 317 Gene3D G3DSA:3.30.420.40 6 307 1.6E-101 T 11-10-2018 Patl_0973 6d7554b173a3345ac433e133576569fa 317 Gene3D G3DSA:3.40.367.20 98 297 1.6E-101 T 11-10-2018 Patl_0973 6d7554b173a3345ac433e133576569fa 317 SUPERFAMILY SSF53067 6 316 3.82E-58 T 11-10-2018 Patl_0973 6d7554b173a3345ac433e133576569fa 317 Hamap MF_00524 Glucokinase [glk]. 3 314 33.772 T 11-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 Patl_4269 79e4b2a4527adc8bf9b08fcabe98199e 365 PIRSF PIRSF000729 3 365 9.1E-125 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Patl_4269 79e4b2a4527adc8bf9b08fcabe98199e 365 SUPERFAMILY SSF88697 274 364 2.49E-19 T 11-10-2018 IPR015947 PUA-like superfamily Patl_4269 79e4b2a4527adc8bf9b08fcabe98199e 365 Pfam PF01472 PUA domain 275 348 1.7E-18 T 11-10-2018 IPR002478 PUA domain GO:0003723 Patl_4269 79e4b2a4527adc8bf9b08fcabe98199e 365 Pfam PF00696 Amino acid kinase family 8 233 2.0E-38 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Patl_4269 79e4b2a4527adc8bf9b08fcabe98199e 365 Hamap MF_00456 Glutamate 5-kinase [proB]. 7 257 33.889 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Patl_4269 79e4b2a4527adc8bf9b08fcabe98199e 365 Gene3D G3DSA:3.40.1160.10 3 262 2.6E-81 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Patl_4269 79e4b2a4527adc8bf9b08fcabe98199e 365 ProSitePatterns PS00902 Glutamate 5-kinase signature. 205 222 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Patl_4269 79e4b2a4527adc8bf9b08fcabe98199e 365 PRINTS PR00474 Glutamate 5-kinase family signature 44 58 1.5E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Patl_4269 79e4b2a4527adc8bf9b08fcabe98199e 365 PRINTS PR00474 Glutamate 5-kinase family signature 114 135 1.5E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Patl_4269 79e4b2a4527adc8bf9b08fcabe98199e 365 PRINTS PR00474 Glutamate 5-kinase family signature 207 227 1.5E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Patl_4269 79e4b2a4527adc8bf9b08fcabe98199e 365 PRINTS PR00474 Glutamate 5-kinase family signature 146 173 1.5E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Patl_4269 79e4b2a4527adc8bf9b08fcabe98199e 365 Gene3D G3DSA:2.30.130.10 264 365 1.6E-28 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 Patl_4269 79e4b2a4527adc8bf9b08fcabe98199e 365 TIGRFAM TIGR01027 proB: glutamate 5-kinase 7 363 2.4E-123 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Patl_4269 79e4b2a4527adc8bf9b08fcabe98199e 365 SUPERFAMILY SSF53633 7 255 8.38E-63 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Patl_4269 79e4b2a4527adc8bf9b08fcabe98199e 365 SMART SM00359 275 357 4.8E-15 T 11-10-2018 IPR002478 PUA domain GO:0003723 Patl_2987 6aac28c0ce3c5f63f4a65a9593aedfa6 133 Gene3D G3DSA:3.30.420.270 60 128 5.8E-12 T 11-10-2018 Patl_2987 6aac28c0ce3c5f63f4a65a9593aedfa6 133 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 130 6.9E-32 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Patl_2760 32511eec033397105bf12ac7c1059136 215 SUPERFAMILY SSF52833 2 101 5.04E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_2760 32511eec033397105bf12ac7c1059136 215 Gene3D G3DSA:1.20.1050.10 79 192 1.3E-33 T 11-10-2018 Patl_2760 32511eec033397105bf12ac7c1059136 215 Gene3D G3DSA:3.40.30.10 3 78 1.3E-33 T 11-10-2018 Patl_2760 32511eec033397105bf12ac7c1059136 215 SUPERFAMILY SSF47616 72 202 5.81E-10 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Patl_2760 32511eec033397105bf12ac7c1059136 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 78 1.4E-17 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Patl_0829 472ae5f89b63d0c0b95f89abce0623af 510 Gene3D G3DSA:3.30.1120.10 431 503 3.8E-5 T 11-10-2018 Patl_0829 472ae5f89b63d0c0b95f89abce0623af 510 Pfam PF00884 Sulfatase 29 399 2.8E-50 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_0829 472ae5f89b63d0c0b95f89abce0623af 510 Gene3D G3DSA:3.40.720.10 28 430 3.1E-80 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_0829 472ae5f89b63d0c0b95f89abce0623af 510 ProSitePatterns PS00523 Sulfatases signature 1. 81 93 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_0829 472ae5f89b63d0c0b95f89abce0623af 510 SUPERFAMILY SSF53649 27 500 2.18E-87 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_0829 472ae5f89b63d0c0b95f89abce0623af 510 ProSitePatterns PS00149 Sulfatases signature 2. 129 139 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_0225 3ca99305bf070fcb9e5cc42884a034bd 240 Gene3D G3DSA:1.10.10.10 131 238 3.0E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0225 3ca99305bf070fcb9e5cc42884a034bd 240 Pfam PF00072 Response regulator receiver domain 8 118 3.0E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0225 3ca99305bf070fcb9e5cc42884a034bd 240 SUPERFAMILY SSF46894 133 235 4.54E-26 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_0225 3ca99305bf070fcb9e5cc42884a034bd 240 Gene3D G3DSA:3.40.50.2300 1 126 6.5E-41 T 11-10-2018 Patl_0225 3ca99305bf070fcb9e5cc42884a034bd 240 SMART SM00862 157 233 5.2E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_0225 3ca99305bf070fcb9e5cc42884a034bd 240 SUPERFAMILY SSF52172 5 128 1.57E-42 T 11-10-2018 IPR011006 CheY-like superfamily Patl_0225 3ca99305bf070fcb9e5cc42884a034bd 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 2.0E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_0225 3ca99305bf070fcb9e5cc42884a034bd 240 SMART SM00448 6 117 3.8E-44 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0969 ceacf2ba8c5554b138032fd8a3106b75 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 8.2E-29 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Patl_0969 ceacf2ba8c5554b138032fd8a3106b75 284 Gene3D G3DSA:1.10.10.10 1 79 5.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0969 ceacf2ba8c5554b138032fd8a3106b75 284 SUPERFAMILY SSF53697 91 277 2.4E-42 T 11-10-2018 Patl_0969 ceacf2ba8c5554b138032fd8a3106b75 284 SUPERFAMILY SSF46689 1 80 4.66E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0969 ceacf2ba8c5554b138032fd8a3106b75 284 Pfam PF01380 SIS domain 124 252 2.5E-25 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Patl_0969 ceacf2ba8c5554b138032fd8a3106b75 284 Gene3D G3DSA:3.40.50.10490 93 274 1.1E-41 T 11-10-2018 Patl_2588 7a0239b3a5dfaec0aa118a8e4a3b0ef3 491 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Patl_2588 7a0239b3a5dfaec0aa118a8e4a3b0ef3 491 SUPERFAMILY SSF53720 6 487 8.25E-167 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_2588 7a0239b3a5dfaec0aa118a8e4a3b0ef3 491 Gene3D G3DSA:3.40.309.10 255 489 1.4E-81 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Patl_2588 7a0239b3a5dfaec0aa118a8e4a3b0ef3 491 Gene3D G3DSA:3.40.605.10 2 254 2.3E-90 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_2588 7a0239b3a5dfaec0aa118a8e4a3b0ef3 491 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Patl_2588 7a0239b3a5dfaec0aa118a8e4a3b0ef3 491 Pfam PF00171 Aldehyde dehydrogenase family 21 480 3.7E-170 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Patl_1800 9f5c65f2fbefd25feb45a69eb0bcc86f 495 Pfam PF00364 Biotin-requiring enzyme 4 75 6.2E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Patl_1800 9f5c65f2fbefd25feb45a69eb0bcc86f 495 Pfam PF00364 Biotin-requiring enzyme 105 176 5.8E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Patl_1800 9f5c65f2fbefd25feb45a69eb0bcc86f 495 Pfam PF02817 e3 binding domain 204 237 5.1E-15 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Patl_1800 9f5c65f2fbefd25feb45a69eb0bcc86f 495 SUPERFAMILY SSF51230 1 94 5.23E-23 T 11-10-2018 IPR011053 Single hybrid motif Patl_1800 9f5c65f2fbefd25feb45a69eb0bcc86f 495 Gene3D G3DSA:4.10.320.10 199 242 1.5E-19 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Patl_1800 9f5c65f2fbefd25feb45a69eb0bcc86f 495 SUPERFAMILY SSF51230 103 193 1.44E-23 T 11-10-2018 IPR011053 Single hybrid motif Patl_1800 9f5c65f2fbefd25feb45a69eb0bcc86f 495 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 104 495 5.8E-181 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Patl_1800 9f5c65f2fbefd25feb45a69eb0bcc86f 495 Gene3D G3DSA:2.40.50.100 2 99 2.1E-19 T 11-10-2018 Patl_1800 9f5c65f2fbefd25feb45a69eb0bcc86f 495 Gene3D G3DSA:2.40.50.100 100 198 5.6E-21 T 11-10-2018 Patl_1800 9f5c65f2fbefd25feb45a69eb0bcc86f 495 SUPERFAMILY SSF47005 198 240 1.31E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Patl_1800 9f5c65f2fbefd25feb45a69eb0bcc86f 495 Gene3D G3DSA:3.30.559.10 263 495 1.9E-96 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Patl_1800 9f5c65f2fbefd25feb45a69eb0bcc86f 495 SUPERFAMILY SSF52777 265 494 1.25E-88 T 11-10-2018 Patl_1800 9f5c65f2fbefd25feb45a69eb0bcc86f 495 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 264 493 5.0E-81 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Patl_1800 9f5c65f2fbefd25feb45a69eb0bcc86f 495 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 128 157 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Patl_1800 9f5c65f2fbefd25feb45a69eb0bcc86f 495 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Patl_0315 d14c3a0b38de3f174214171f9bf57379 391 SUPERFAMILY SSF56645 8 248 8.51E-85 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_0315 d14c3a0b38de3f174214171f9bf57379 391 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Patl_0315 d14c3a0b38de3f174214171f9bf57379 391 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Patl_0315 d14c3a0b38de3f174214171f9bf57379 391 Gene3D G3DSA:1.10.540.10 7 127 7.0E-38 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Patl_0315 d14c3a0b38de3f174214171f9bf57379 391 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 3.7E-26 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Patl_0315 d14c3a0b38de3f174214171f9bf57379 391 SUPERFAMILY SSF47203 234 384 5.8E-44 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_0315 d14c3a0b38de3f174214171f9bf57379 391 PIRSF PIRSF016578 39 105 7.8 T 11-10-2018 Patl_0315 d14c3a0b38de3f174214171f9bf57379 391 PIRSF PIRSF016578 133 382 7.9E-12 T 11-10-2018 Patl_0315 d14c3a0b38de3f174214171f9bf57379 391 Gene3D G3DSA:2.40.110.10 128 239 5.0E-45 T 11-10-2018 Patl_0315 d14c3a0b38de3f174214171f9bf57379 391 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 3.6E-42 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_0315 d14c3a0b38de3f174214171f9bf57379 391 Gene3D G3DSA:1.20.140.10 240 390 5.2E-43 T 11-10-2018 Patl_0315 d14c3a0b38de3f174214171f9bf57379 391 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 125 8.7E-32 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Patl_0088 2696d2d32ddb56baa40ee3117fe01f10 161 SUPERFAMILY SSF52304 16 159 3.27E-63 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Patl_0088 2696d2d32ddb56baa40ee3117fe01f10 161 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 16 155 2.5E-63 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Patl_0088 2696d2d32ddb56baa40ee3117fe01f10 161 Gene3D G3DSA:3.40.50.9100 11 160 4.6E-67 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Patl_0088 2696d2d32ddb56baa40ee3117fe01f10 161 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 161 71.813 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Patl_0088 2696d2d32ddb56baa40ee3117fe01f10 161 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 17 161 1.0E-80 T 11-10-2018 Patl_0088 2696d2d32ddb56baa40ee3117fe01f10 161 ProSitePatterns PS01029 Dehydroquinase class II signature. 20 37 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Patl_0088 2696d2d32ddb56baa40ee3117fe01f10 161 PIRSF PIRSF001399 14 159 2.0E-62 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Patl_0088 2696d2d32ddb56baa40ee3117fe01f10 161 Pfam PF01220 Dehydroquinase class II 16 152 4.2E-63 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Patl_2527 a132a59109d0dffc34b0a68cfa816d33 202 Gene3D G3DSA:3.40.50.360 1 199 8.7E-57 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_2527 a132a59109d0dffc34b0a68cfa816d33 202 Pfam PF02525 Flavodoxin-like fold 2 195 4.9E-46 T 11-10-2018 IPR003680 Flavodoxin-like fold Patl_2527 a132a59109d0dffc34b0a68cfa816d33 202 SUPERFAMILY SSF52218 1 197 1.86E-55 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_2527 a132a59109d0dffc34b0a68cfa816d33 202 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 198 28.02 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 Patl_2042 83d09b213f87f9ff7e19b50e64bdc441 175 Gene3D G3DSA:2.160.10.10 2 172 1.4E-60 T 11-10-2018 Patl_2042 83d09b213f87f9ff7e19b50e64bdc441 175 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 10 44 6.5E-6 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_2042 83d09b213f87f9ff7e19b50e64bdc441 175 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 121 7.5E-9 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_2042 83d09b213f87f9ff7e19b50e64bdc441 175 SUPERFAMILY SSF51161 4 165 2.22E-48 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Patl_3527 626f14a37661f17e12085f811e325ecd 311 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 310 8.4E-122 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Patl_3527 626f14a37661f17e12085f811e325ecd 311 SUPERFAMILY SSF53335 7 311 3.27E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3527 626f14a37661f17e12085f811e325ecd 311 Gene3D G3DSA:1.10.150.170 113 215 5.0E-106 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Patl_3527 626f14a37661f17e12085f811e325ecd 311 PIRSF PIRSF004486 1 311 1.9E-104 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Patl_3527 626f14a37661f17e12085f811e325ecd 311 Pfam PF01795 MraW methylase family 6 310 4.2E-114 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Patl_3527 626f14a37661f17e12085f811e325ecd 311 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 38.514 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Patl_3527 626f14a37661f17e12085f811e325ecd 311 SUPERFAMILY SSF81799 115 214 7.32E-34 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Patl_3527 626f14a37661f17e12085f811e325ecd 311 Gene3D G3DSA:3.40.50.150 10 310 5.0E-106 T 11-10-2018 Patl_2511 f14553fd5a84cfaaf8f1fd54b5698e5c 166 Gene3D G3DSA:1.10.150.120 74 165 2.5E-27 T 11-10-2018 Patl_2511 f14553fd5a84cfaaf8f1fd54b5698e5c 166 SUPERFAMILY SSF47741 72 151 4.45E-33 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Patl_2511 f14553fd5a84cfaaf8f1fd54b5698e5c 166 SUPERFAMILY SSF54292 2 77 1.01E-26 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Patl_2511 f14553fd5a84cfaaf8f1fd54b5698e5c 166 Gene3D G3DSA:3.10.20.30 1 73 1.5E-27 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_2511 f14553fd5a84cfaaf8f1fd54b5698e5c 166 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 58 1.2E-7 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Patl_2511 f14553fd5a84cfaaf8f1fd54b5698e5c 166 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Patl_2511 f14553fd5a84cfaaf8f1fd54b5698e5c 166 Pfam PF01799 [2Fe-2S] binding domain 72 144 6.2E-29 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Patl_3606 9d7306932b2a6874c365c3c075d3f354 419 Pfam PF00144 Beta-lactamase 46 400 1.1E-74 T 11-10-2018 IPR001466 Beta-lactamase-related Patl_3606 9d7306932b2a6874c365c3c075d3f354 419 SUPERFAMILY SSF56601 38 401 1.27E-93 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Patl_3606 9d7306932b2a6874c365c3c075d3f354 419 Gene3D G3DSA:3.40.710.10 39 418 4.9E-131 T 11-10-2018 Patl_0823 910e3b9be5de0e1e511b222640b91a6f 534 PIRSF PIRSF001092 25 524 1.0E-86 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_0823 910e3b9be5de0e1e511b222640b91a6f 534 Pfam PF01120 Alpha-L-fucosidase 45 410 5.0E-93 T 11-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_0823 910e3b9be5de0e1e511b222640b91a6f 534 PRINTS PR00741 Glycosyl hydrolase family 29 signature 262 278 1.7E-13 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_0823 910e3b9be5de0e1e511b222640b91a6f 534 PRINTS PR00741 Glycosyl hydrolase family 29 signature 363 384 1.7E-13 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_0823 910e3b9be5de0e1e511b222640b91a6f 534 PRINTS PR00741 Glycosyl hydrolase family 29 signature 396 418 1.7E-13 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_0823 910e3b9be5de0e1e511b222640b91a6f 534 PRINTS PR00741 Glycosyl hydrolase family 29 signature 131 146 1.7E-13 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_0823 910e3b9be5de0e1e511b222640b91a6f 534 Pfam PF16757 Alpha-L-fucosidase C-terminal domain 443 514 2.2E-11 T 11-10-2018 IPR031919 Alpha-L-fucosidase, C-terminal KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_0823 910e3b9be5de0e1e511b222640b91a6f 534 Gene3D G3DSA:3.20.20.80 48 413 3.9E-117 T 11-10-2018 Patl_0823 910e3b9be5de0e1e511b222640b91a6f 534 SMART SM00812 52 474 1.5E-131 T 11-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_0823 910e3b9be5de0e1e511b222640b91a6f 534 Gene3D G3DSA:2.60.40.1180 414 529 1.6E-29 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_0823 910e3b9be5de0e1e511b222640b91a6f 534 SUPERFAMILY SSF51445 52 413 5.58E-92 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_2407 9e778829b899a52ad5928e9cbc1860c4 438 Pfam PF02687 FtsX-like permease family 341 431 6.4E-11 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Patl_2407 9e778829b899a52ad5928e9cbc1860c4 438 Pfam PF12704 MacB-like periplasmic core domain 20 219 1.8E-19 T 11-10-2018 IPR025857 MacB-like periplasmic core domain Patl_3497 3630b6ff3ca8b41d7b748ba78c637f7b 717 SUPERFAMILY SSF52317 355 545 8.93E-8 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_3497 3630b6ff3ca8b41d7b748ba78c637f7b 717 Gene3D G3DSA:3.40.50.880 328 544 8.8E-6 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_0780 1e589f785335096aeec0b6a434fbb26f 475 Pfam PF00012 Hsp70 protein 347 447 8.7E-7 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_0780 1e589f785335096aeec0b6a434fbb26f 475 Pfam PF00012 Hsp70 protein 154 285 2.3E-7 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_0780 1e589f785335096aeec0b6a434fbb26f 475 SUPERFAMILY SSF53067 233 470 1.62E-27 T 11-10-2018 Patl_0780 1e589f785335096aeec0b6a434fbb26f 475 Gene3D G3DSA:3.90.640.10 348 402 9.2E-11 T 11-10-2018 Patl_0780 1e589f785335096aeec0b6a434fbb26f 475 Gene3D G3DSA:3.30.420.40 403 445 9.2E-11 T 11-10-2018 Patl_0780 1e589f785335096aeec0b6a434fbb26f 475 Gene3D G3DSA:3.30.420.40 2 66 2.2E-6 T 11-10-2018 Patl_0780 1e589f785335096aeec0b6a434fbb26f 475 Gene3D G3DSA:3.30.420.40 75 243 5.1E-16 T 11-10-2018 Patl_0780 1e589f785335096aeec0b6a434fbb26f 475 SUPERFAMILY SSF53067 2 230 1.71E-22 T 11-10-2018 Patl_0780 1e589f785335096aeec0b6a434fbb26f 475 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 238 251 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Patl_4038 090bb5573159528a56afb4e18760b771 569 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 556 0.021 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_4038 090bb5573159528a56afb4e18760b771 569 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 8 569 57.999 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_4038 090bb5573159528a56afb4e18760b771 569 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 171 327 4.0E-45 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_4038 090bb5573159528a56afb4e18760b771 569 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 78 137 8.0E-13 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_4038 090bb5573159528a56afb4e18760b771 569 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 351 415 9.5E-14 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_4038 090bb5573159528a56afb4e18760b771 569 Gene3D G3DSA:3.30.413.10 139 346 1.1E-80 T 11-10-2018 Patl_4038 090bb5573159528a56afb4e18760b771 569 SUPERFAMILY SSF55124 344 420 9.0E-21 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_4038 090bb5573159528a56afb4e18760b771 569 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 17 557 1.2E-276 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_4038 090bb5573159528a56afb4e18760b771 569 SUPERFAMILY SSF55124 11 143 3.11E-24 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_4038 090bb5573159528a56afb4e18760b771 569 PRINTS PR00397 Sirohaem Fe-binding site signature 428 446 1.1E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_4038 090bb5573159528a56afb4e18760b771 569 PRINTS PR00397 Sirohaem Fe-binding site signature 476 494 1.1E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_4038 090bb5573159528a56afb4e18760b771 569 Gene3D G3DSA:3.90.480.20 14 407 1.1E-80 T 11-10-2018 Patl_4038 090bb5573159528a56afb4e18760b771 569 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 476 492 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_4038 090bb5573159528a56afb4e18760b771 569 SUPERFAMILY SSF56014 147 342 7.2E-57 T 11-10-2018 Patl_4038 090bb5573159528a56afb4e18760b771 569 Gene3D G3DSA:3.30.413.10 424 566 2.8E-33 T 11-10-2018 Patl_4038 090bb5573159528a56afb4e18760b771 569 SUPERFAMILY SSF56014 428 560 3.14E-32 T 11-10-2018 Patl_2752 04bd8f846ff3b7810bf4ec19a5e76094 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 259 5.6E-51 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Patl_2752 04bd8f846ff3b7810bf4ec19a5e76094 260 Gene3D G3DSA:1.10.12.10 203 260 2.0E-14 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Patl_2752 04bd8f846ff3b7810bf4ec19a5e76094 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Patl_2752 04bd8f846ff3b7810bf4ec19a5e76094 260 SUPERFAMILY SSF52096 1 259 7.21E-70 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_2752 04bd8f846ff3b7810bf4ec19a5e76094 260 Gene3D G3DSA:3.90.226.10 1 201 1.1E-62 T 11-10-2018 Patl_3126 756d98d7a0b0c41c38a7674d61d12009 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 353 6.9E-130 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Patl_3126 756d98d7a0b0c41c38a7674d61d12009 372 SUPERFAMILY SSF51604 40 139 5.3E-8 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Patl_3126 756d98d7a0b0c41c38a7674d61d12009 372 Gene3D G3DSA:3.20.20.20 1 261 3.6E-105 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Patl_3126 756d98d7a0b0c41c38a7674d61d12009 372 Pfam PF04551 GcpE protein 13 354 2.1E-132 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Patl_3126 756d98d7a0b0c41c38a7674d61d12009 372 SUPERFAMILY SSF56014 265 354 1.8E-13 T 11-10-2018 Patl_3126 756d98d7a0b0c41c38a7674d61d12009 372 PIRSF PIRSF004640 1 364 1.8E-146 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Patl_3126 756d98d7a0b0c41c38a7674d61d12009 372 Gene3D G3DSA:3.30.413.10 262 360 7.2E-24 T 11-10-2018 Patl_3126 756d98d7a0b0c41c38a7674d61d12009 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.085 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Patl_0637 c82ee4e9c953c59b99de2515a44932d3 402 SUPERFAMILY SSF111352 13 380 6.8E-95 T 11-10-2018 Patl_0637 c82ee4e9c953c59b99de2515a44932d3 402 Pfam PF00909 Ammonium Transporter Family 19 394 2.1E-88 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Patl_0637 c82ee4e9c953c59b99de2515a44932d3 402 Gene3D G3DSA:1.10.3430.10 2 401 2.2E-97 T 11-10-2018 IPR029020 Ammonium/urea transporter Patl_0637 c82ee4e9c953c59b99de2515a44932d3 402 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Patl_2915 3655defda6c14917a4dc901bf5fd9d23 310 SUPERFAMILY SSF51395 3 307 3.66E-68 T 11-10-2018 Patl_2915 3655defda6c14917a4dc901bf5fd9d23 310 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 309 53.887 T 11-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 Patl_2915 3655defda6c14917a4dc901bf5fd9d23 310 Gene3D G3DSA:3.20.20.70 1 241 4.0E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2915 3655defda6c14917a4dc901bf5fd9d23 310 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Patl_2915 3655defda6c14917a4dc901bf5fd9d23 310 Gene3D G3DSA:1.20.225.30 242 309 1.6E-21 T 11-10-2018 Patl_2915 3655defda6c14917a4dc901bf5fd9d23 310 Pfam PF01207 Dihydrouridine synthase (Dus) 4 299 3.0E-73 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Patl_2915 3655defda6c14917a4dc901bf5fd9d23 310 PIRSF PIRSF006621 1 310 2.0E-78 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Patl_0717 e2ea44bc9f251574266f8c943288aec9 401 SUPERFAMILY SSF50939 86 315 3.33E-6 T 11-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 Patl_2089 b8ddc3a2d212860f88e1c60a7f96717b 306 Gene3D G3DSA:3.40.50.2300 7 137 1.2E-34 T 11-10-2018 Patl_2089 b8ddc3a2d212860f88e1c60a7f96717b 306 SUPERFAMILY SSF52172 12 138 1.57E-34 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2089 b8ddc3a2d212860f88e1c60a7f96717b 306 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 141 305 7.3E-52 T 11-10-2018 IPR000160 GGDEF domain Patl_2089 b8ddc3a2d212860f88e1c60a7f96717b 306 Pfam PF00072 Response regulator receiver domain 18 128 2.7E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2089 b8ddc3a2d212860f88e1c60a7f96717b 306 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 304 3.4E-49 T 11-10-2018 IPR000160 GGDEF domain Patl_2089 b8ddc3a2d212860f88e1c60a7f96717b 306 SMART SM00267 134 306 1.7E-56 T 11-10-2018 IPR000160 GGDEF domain Patl_2089 b8ddc3a2d212860f88e1c60a7f96717b 306 SUPERFAMILY SSF55073 150 306 2.28E-44 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_2089 b8ddc3a2d212860f88e1c60a7f96717b 306 SMART SM00448 16 128 8.4E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2089 b8ddc3a2d212860f88e1c60a7f96717b 306 Gene3D G3DSA:3.30.70.270 138 306 7.5E-54 T 11-10-2018 Patl_3837 2b98326588e2d13c45d6efab2d1bd0ed 283 Pfam PF00303 Thymidylate synthase 2 283 8.2E-72 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Patl_3837 2b98326588e2d13c45d6efab2d1bd0ed 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 31.195 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Patl_3837 2b98326588e2d13c45d6efab2d1bd0ed 283 SUPERFAMILY SSF55831 1 283 4.06E-90 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Patl_3837 2b98326588e2d13c45d6efab2d1bd0ed 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 2.1E-41 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Patl_3837 2b98326588e2d13c45d6efab2d1bd0ed 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 11-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Patl_3837 2b98326588e2d13c45d6efab2d1bd0ed 283 Gene3D G3DSA:3.30.572.10 1 283 7.8E-78 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Patl_3837 2b98326588e2d13c45d6efab2d1bd0ed 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 1.4E-12 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Patl_3837 2b98326588e2d13c45d6efab2d1bd0ed 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 1.4E-12 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Patl_3837 2b98326588e2d13c45d6efab2d1bd0ed 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 1.4E-12 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Patl_3837 2b98326588e2d13c45d6efab2d1bd0ed 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 1.4E-12 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 Patl_1205 a43ab139322f03da752e7f13bbadf446 279 Gene3D G3DSA:3.40.1090.10 101 169 1.7E-15 T 11-10-2018 Patl_1205 a43ab139322f03da752e7f13bbadf446 279 Gene3D G3DSA:3.40.1090.10 2 100 4.4E-22 T 11-10-2018 Patl_1205 a43ab139322f03da752e7f13bbadf446 279 Pfam PF01734 Patatin-like phospholipase 8 165 3.3E-24 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Patl_1205 a43ab139322f03da752e7f13bbadf446 279 SUPERFAMILY SSF52151 7 267 4.53E-39 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Patl_2289 a7db655f68d8ed9c75179729836b3a18 204 PIRSF PIRSF006324 1 204 6.7E-41 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Patl_2289 a7db655f68d8ed9c75179729836b3a18 204 Pfam PF01810 LysE type translocator 16 202 9.7E-24 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Patl_3775 026aee79fdedbfcc3fc57582e866fb8f 436 Pfam PF12040 Domain of unknown function (DUF3526) 275 416 2.8E-33 T 11-10-2018 IPR021913 Protein of unknown function DUF3526 Patl_3759 90329e8019bad7c8ef3f3a4ce3f9dcae 337 Gene3D G3DSA:3.40.50.720 128 273 1.9E-96 T 11-10-2018 Patl_3759 90329e8019bad7c8ef3f3a4ce3f9dcae 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 92 1.9E-5 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_3759 90329e8019bad7c8ef3f3a4ce3f9dcae 337 Gene3D G3DSA:3.90.180.10 23 334 1.9E-96 T 11-10-2018 Patl_3759 90329e8019bad7c8ef3f3a4ce3f9dcae 337 SUPERFAMILY SSF51735 117 284 3.42E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3759 90329e8019bad7c8ef3f3a4ce3f9dcae 337 Pfam PF13602 Zinc-binding dehydrogenase 194 334 4.2E-16 T 11-10-2018 Patl_3759 90329e8019bad7c8ef3f3a4ce3f9dcae 337 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 337 4.9E-138 T 11-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 Patl_3759 90329e8019bad7c8ef3f3a4ce3f9dcae 337 SUPERFAMILY SSF50129 1 141 4.72E-28 T 11-10-2018 IPR011032 GroES-like superfamily Patl_3759 90329e8019bad7c8ef3f3a4ce3f9dcae 337 SMART SM00829 16 334 2.3E-10 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_2885 b79264374d89f207601cd060aa3b92ef 244 Gene3D G3DSA:3.20.20.70 1 244 2.8E-92 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2885 b79264374d89f207601cd060aa3b92ef 244 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.244 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Patl_2885 b79264374d89f207601cd060aa3b92ef 244 Pfam PF00977 Histidine biosynthesis protein 1 234 5.8E-76 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Patl_2885 b79264374d89f207601cd060aa3b92ef 244 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 237 9.6E-77 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Patl_2885 b79264374d89f207601cd060aa3b92ef 244 SUPERFAMILY SSF51366 1 243 9.42E-66 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Patl_3876 f664f2361a2ad6d8d73d8b5e513bcccc 167 SUPERFAMILY SSF53155 11 80 8.63E-17 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Patl_3876 f664f2361a2ad6d8d73d8b5e513bcccc 167 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 77 155 3.3E-33 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Patl_3876 f664f2361a2ad6d8d73d8b5e513bcccc 167 Gene3D G3DSA:3.30.160.70 10 71 2.4E-12 T 11-10-2018 Patl_3876 f664f2361a2ad6d8d73d8b5e513bcccc 167 Gene3D G3DSA:1.10.10.10 75 159 1.6E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3876 f664f2361a2ad6d8d73d8b5e513bcccc 167 SUPERFAMILY SSF46767 75 156 7.32E-33 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Patl_3876 f664f2361a2ad6d8d73d8b5e513bcccc 167 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 126 132 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Patl_3876 f664f2361a2ad6d8d73d8b5e513bcccc 167 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 13 156 43.378 T 11-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 Patl_3876 f664f2361a2ad6d8d73d8b5e513bcccc 167 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 76 155 5.6E-37 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Patl_3630 e1979b67511ebbb1eff47edd2fdc7d3d 786 SUPERFAMILY SSF53098 8 392 1.01E-76 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_3630 e1979b67511ebbb1eff47edd2fdc7d3d 786 Pfam PF00136 DNA polymerase family B 380 743 1.4E-42 T 11-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_3630 e1979b67511ebbb1eff47edd2fdc7d3d 786 SUPERFAMILY SSF56672 388 781 1.45E-113 T 11-10-2018 Patl_3630 e1979b67511ebbb1eff47edd2fdc7d3d 786 Gene3D G3DSA:1.10.132.60 642 786 2.2E-58 T 11-10-2018 Patl_3630 e1979b67511ebbb1eff47edd2fdc7d3d 786 Gene3D G3DSA:2.40.50.590 8 155 2.5E-41 T 11-10-2018 Patl_3630 e1979b67511ebbb1eff47edd2fdc7d3d 786 Gene3D G3DSA:3.90.1600.10 485 635 1.8E-49 T 11-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_3630 e1979b67511ebbb1eff47edd2fdc7d3d 786 Gene3D G3DSA:3.90.1600.10 351 444 2.7E-27 T 11-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_3630 e1979b67511ebbb1eff47edd2fdc7d3d 786 Gene3D G3DSA:3.30.70.2250 43 110 2.5E-41 T 11-10-2018 Patl_3630 e1979b67511ebbb1eff47edd2fdc7d3d 786 Gene3D G3DSA:3.30.420.10 158 350 1.6E-67 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Patl_3630 e1979b67511ebbb1eff47edd2fdc7d3d 786 ProSitePatterns PS00116 DNA polymerase family B signature. 544 552 - T 11-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_3630 e1979b67511ebbb1eff47edd2fdc7d3d 786 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 418 431 5.0E-11 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_3630 e1979b67511ebbb1eff47edd2fdc7d3d 786 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 542 550 5.0E-11 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_3630 e1979b67511ebbb1eff47edd2fdc7d3d 786 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 490 502 5.0E-11 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_3630 e1979b67511ebbb1eff47edd2fdc7d3d 786 SMART SM00486 155 556 9.1E-62 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_3630 e1979b67511ebbb1eff47edd2fdc7d3d 786 Pfam PF03104 DNA polymerase family B, exonuclease domain 79 297 3.3E-18 T 11-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_4146 0b18c6e2d5d3faf2e5e35c73f9618f27 368 Gene3D G3DSA:2.30.130.10 264 365 1.9E-12 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 Patl_4146 0b18c6e2d5d3faf2e5e35c73f9618f27 368 PIRSF PIRSF000729 3 366 9.7E-103 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Patl_4146 0b18c6e2d5d3faf2e5e35c73f9618f27 368 PRINTS PR00474 Glutamate 5-kinase family signature 146 173 7.2E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Patl_4146 0b18c6e2d5d3faf2e5e35c73f9618f27 368 PRINTS PR00474 Glutamate 5-kinase family signature 44 58 7.2E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Patl_4146 0b18c6e2d5d3faf2e5e35c73f9618f27 368 PRINTS PR00474 Glutamate 5-kinase family signature 114 135 7.2E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Patl_4146 0b18c6e2d5d3faf2e5e35c73f9618f27 368 PRINTS PR00474 Glutamate 5-kinase family signature 207 227 7.2E-38 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Patl_4146 0b18c6e2d5d3faf2e5e35c73f9618f27 368 SUPERFAMILY SSF53633 7 255 4.58E-63 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Patl_4146 0b18c6e2d5d3faf2e5e35c73f9618f27 368 Gene3D G3DSA:3.40.1160.10 1 263 3.5E-78 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Patl_4146 0b18c6e2d5d3faf2e5e35c73f9618f27 368 Hamap MF_00456 Glutamate 5-kinase [proB]. 7 257 32.137 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Patl_4146 0b18c6e2d5d3faf2e5e35c73f9618f27 368 SUPERFAMILY SSF88697 275 344 5.52E-10 T 11-10-2018 IPR015947 PUA-like superfamily Patl_4146 0b18c6e2d5d3faf2e5e35c73f9618f27 368 TIGRFAM TIGR01027 proB: glutamate 5-kinase 7 354 1.3E-98 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Patl_4146 0b18c6e2d5d3faf2e5e35c73f9618f27 368 ProSitePatterns PS00902 Glutamate 5-kinase signature. 205 222 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Patl_4146 0b18c6e2d5d3faf2e5e35c73f9618f27 368 Pfam PF01472 PUA domain 277 331 1.5E-6 T 11-10-2018 IPR002478 PUA domain GO:0003723 Patl_4146 0b18c6e2d5d3faf2e5e35c73f9618f27 368 Pfam PF00696 Amino acid kinase family 7 233 6.7E-38 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Patl_3893 3c65f3b00383f436c302db9e60be4c5a 404 SUPERFAMILY SSF54373 178 278 4.32E-45 T 11-10-2018 Patl_3893 3c65f3b00383f436c302db9e60be4c5a 404 Pfam PF01494 FAD binding domain 5 346 3.7E-83 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 Patl_3893 3c65f3b00383f436c302db9e60be4c5a 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 6.9E-28 T 11-10-2018 Patl_3893 3c65f3b00383f436c302db9e60be4c5a 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 6.9E-28 T 11-10-2018 Patl_3893 3c65f3b00383f436c302db9e60be4c5a 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 6.9E-28 T 11-10-2018 Patl_3893 3c65f3b00383f436c302db9e60be4c5a 404 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 6.9E-28 T 11-10-2018 Patl_3893 3c65f3b00383f436c302db9e60be4c5a 404 Gene3D G3DSA:3.50.50.60 5 354 3.7E-154 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3893 3c65f3b00383f436c302db9e60be4c5a 404 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 5 401 1.1E-191 T 11-10-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 Patl_3893 3c65f3b00383f436c302db9e60be4c5a 404 SUPERFAMILY SSF51905 5 356 3.67E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3893 3c65f3b00383f436c302db9e60be4c5a 404 Gene3D G3DSA:3.30.9.10 76 398 3.7E-154 T 11-10-2018 Patl_2698 3b2d7ba4f8f0ff526e39795c010c5e6f 347 Gene3D G3DSA:3.10.180.10 27 181 1.9E-7 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2698 3b2d7ba4f8f0ff526e39795c010c5e6f 347 SUPERFAMILY SSF54593 186 346 2.75E-13 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2698 3b2d7ba4f8f0ff526e39795c010c5e6f 347 SUPERFAMILY SSF54593 33 227 8.79E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2698 3b2d7ba4f8f0ff526e39795c010c5e6f 347 Gene3D G3DSA:3.10.180.10 197 346 2.6E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_0319 a397ef87d4688d28318124c45ef8b0e6 689 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 314 321 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Patl_0319 a397ef87d4688d28318124c45ef8b0e6 689 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 636 653 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Patl_0319 a397ef87d4688d28318124c45ef8b0e6 689 Gene3D G3DSA:3.30.470.130 18 476 1.9E-197 T 11-10-2018 Patl_0319 a397ef87d4688d28318124c45ef8b0e6 689 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 181 195 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Patl_0319 a397ef87d4688d28318124c45ef8b0e6 689 Gene3D G3DSA:2.40.50.100 604 682 1.8E-18 T 11-10-2018 Patl_0319 a397ef87d4688d28318124c45ef8b0e6 689 SUPERFAMILY SSF52440 14 141 2.09E-50 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Patl_0319 a397ef87d4688d28318124c45ef8b0e6 689 SMART SM00878 364 470 7.3E-50 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Patl_0319 a397ef87d4688d28318124c45ef8b0e6 689 SUPERFAMILY SSF51230 605 679 2.22E-18 T 11-10-2018 IPR011053 Single hybrid motif Patl_0319 a397ef87d4688d28318124c45ef8b0e6 689 SUPERFAMILY SSF51246 359 474 1.83E-38 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Patl_0319 a397ef87d4688d28318124c45ef8b0e6 689 Pfam PF00289 Biotin carboxylase, N-terminal domain 30 138 9.2E-46 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Patl_0319 a397ef87d4688d28318124c45ef8b0e6 689 SUPERFAMILY SSF56059 111 376 1.64E-66 T 11-10-2018 Patl_0319 a397ef87d4688d28318124c45ef8b0e6 689 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 144 350 1.1E-75 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Patl_0319 a397ef87d4688d28318124c45ef8b0e6 689 Pfam PF02785 Biotin carboxylase C-terminal domain 364 471 1.9E-36 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Patl_0319 a397ef87d4688d28318124c45ef8b0e6 689 Pfam PF00364 Biotin-requiring enzyme 617 679 7.4E-14 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Patl_2551 a5066e1c81c9c77f131080086fdd4fef 341 Gene3D G3DSA:3.40.50.720 150 282 1.8E-92 T 11-10-2018 Patl_2551 a5066e1c81c9c77f131080086fdd4fef 341 SMART SM00829 8 335 6.0E-6 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_2551 a5066e1c81c9c77f131080086fdd4fef 341 SUPERFAMILY SSF51735 135 303 1.06E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2551 a5066e1c81c9c77f131080086fdd4fef 341 SUPERFAMILY SSF50129 1 170 3.35E-44 T 11-10-2018 IPR011032 GroES-like superfamily Patl_2551 a5066e1c81c9c77f131080086fdd4fef 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 132 5.9E-31 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_2551 a5066e1c81c9c77f131080086fdd4fef 341 Pfam PF00107 Zinc-binding dehydrogenase 172 298 4.4E-23 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_2551 a5066e1c81c9c77f131080086fdd4fef 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Patl_2551 a5066e1c81c9c77f131080086fdd4fef 341 Gene3D G3DSA:3.90.180.10 21 325 1.8E-92 T 11-10-2018 Patl_1315 b3435ab8d49db183ed0a0de7760b3444 140 Pfam PF01029 NusB family 7 131 1.7E-35 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Patl_1315 b3435ab8d49db183ed0a0de7760b3444 140 SUPERFAMILY SSF48013 3 136 6.28E-43 T 11-10-2018 IPR035926 NusB-like superfamily Patl_1315 b3435ab8d49db183ed0a0de7760b3444 140 Gene3D G3DSA:1.10.940.10 1 139 7.1E-50 T 11-10-2018 IPR035926 NusB-like superfamily Patl_1315 b3435ab8d49db183ed0a0de7760b3444 140 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 133 4.1E-45 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 Patl_1315 b3435ab8d49db183ed0a0de7760b3444 140 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 4 135 22.977 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 Patl_0052 088fecb0ba8a039e1bf73fb1534c57e1 357 PIRSF PIRSF028458 1 357 1.1E-124 T 11-10-2018 IPR016886 Predicted glycerophosphotransferase UCP028458 Patl_0052 088fecb0ba8a039e1bf73fb1534c57e1 357 SUPERFAMILY SSF53756 14 330 6.91E-38 T 11-10-2018 Patl_0052 088fecb0ba8a039e1bf73fb1534c57e1 357 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 125 324 2.0E-12 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Patl_0052 088fecb0ba8a039e1bf73fb1534c57e1 357 Gene3D G3DSA:3.40.50.12580 155 270 1.5E-7 T 11-10-2018 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 SUPERFAMILY SSF48334 287 591 8.11E-86 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 Gene3D G3DSA:1.10.1420.10 286 585 4.1E-100 T 11-10-2018 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 Pfam PF01624 MutS domain I 22 133 1.1E-42 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 21 880 24.82 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 Pfam PF00488 MutS domain V 636 823 2.5E-87 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 PIRSF PIRSF037677 12 873 3.3E-163 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 SUPERFAMILY SSF55271 15 129 3.14E-43 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 SMART SM00533 303 617 3.5E-95 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 21 886 0.0 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 Gene3D G3DSA:3.40.50.300 595 888 7.2E-101 T 11-10-2018 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 Pfam PF05190 MutS family domain IV 454 544 4.4E-29 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 SMART SM00534 633 820 1.8E-119 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 Pfam PF05188 MutS domain II 154 273 5.1E-29 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 SUPERFAMILY SSF53150 128 286 5.36E-41 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 714 730 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 Gene3D G3DSA:3.30.420.110 143 282 5.2E-34 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 Gene3D G3DSA:1.10.1420.10 413 529 4.1E-100 T 11-10-2018 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 Pfam PF05192 MutS domain III 289 585 9.0E-38 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 SUPERFAMILY SSF52540 593 823 2.59E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3263 6e0227fe46bfa6e96a5ea28f76c3ee22 889 Gene3D G3DSA:3.40.1170.10 13 135 1.4E-51 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Patl_0586 1dca298045220c4232d55118e97c0bcd 287 SUPERFAMILY SSF53850 56 283 1.88E-26 T 11-10-2018 Patl_0586 1dca298045220c4232d55118e97c0bcd 287 Gene3D G3DSA:3.40.190.10 146 242 5.9E-17 T 11-10-2018 Patl_0586 1dca298045220c4232d55118e97c0bcd 287 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 67 281 5.9E-14 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_0586 1dca298045220c4232d55118e97c0bcd 287 Gene3D G3DSA:3.40.190.10 68 279 5.9E-17 T 11-10-2018 Patl_0869 b73041248d905ec27950ee3b54ec4f71 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 72 86 3.8E-44 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 Patl_0869 b73041248d905ec27950ee3b54ec4f71 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 187 195 3.8E-44 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 Patl_0869 b73041248d905ec27950ee3b54ec4f71 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 133 142 3.8E-44 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 Patl_0869 b73041248d905ec27950ee3b54ec4f71 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 26 36 3.8E-44 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 Patl_0869 b73041248d905ec27950ee3b54ec4f71 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 36 48 3.8E-44 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 Patl_0869 b73041248d905ec27950ee3b54ec4f71 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 86 100 3.8E-44 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 Patl_0869 b73041248d905ec27950ee3b54ec4f71 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 108 127 3.8E-44 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 Patl_0869 b73041248d905ec27950ee3b54ec4f71 318 PRINTS PR00409 Phthalate dioxygenase reductase family signature 48 62 3.8E-44 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 Patl_0869 b73041248d905ec27950ee3b54ec4f71 318 Gene3D G3DSA:3.10.20.30 223 318 1.1E-20 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_0869 b73041248d905ec27950ee3b54ec4f71 318 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 239 307 3.3E-9 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Patl_0869 b73041248d905ec27950ee3b54ec4f71 318 SUPERFAMILY SSF63380 2 96 8.21E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Patl_0869 b73041248d905ec27950ee3b54ec4f71 318 Gene3D G3DSA:2.40.30.10 1 97 1.8E-28 T 11-10-2018 Patl_0869 b73041248d905ec27950ee3b54ec4f71 318 SUPERFAMILY SSF52343 94 221 4.98E-23 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_0869 b73041248d905ec27950ee3b54ec4f71 318 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 267 275 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Patl_0869 b73041248d905ec27950ee3b54ec4f71 318 SUPERFAMILY SSF54292 209 316 3.54E-23 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Patl_0869 b73041248d905ec27950ee3b54ec4f71 318 Gene3D G3DSA:3.40.50.80 98 219 1.8E-20 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_3399 f927cd7a2dc37311e83b83b27c308493 345 Pfam PF00924 Mechanosensitive ion channel 59 245 4.7E-22 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Patl_3399 f927cd7a2dc37311e83b83b27c308493 345 Gene3D G3DSA:2.30.30.60 110 157 1.6E-8 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Patl_3399 f927cd7a2dc37311e83b83b27c308493 345 SUPERFAMILY SSF50182 95 156 1.73E-12 T 11-10-2018 IPR010920 LSM domain superfamily Patl_3399 f927cd7a2dc37311e83b83b27c308493 345 SUPERFAMILY SSF82689 164 249 6.54E-8 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Patl_0080 04a8619c6864121ad02da51625a22760 476 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 472 3.5E-156 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Patl_0080 04a8619c6864121ad02da51625a22760 476 Pfam PF08323 Starch synthase catalytic domain 2 229 3.8E-67 T 11-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Patl_0080 04a8619c6864121ad02da51625a22760 476 Gene3D G3DSA:3.40.50.2000 3 471 3.3E-161 T 11-10-2018 Patl_0080 04a8619c6864121ad02da51625a22760 476 Pfam PF00534 Glycosyl transferases group 1 290 446 2.6E-13 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Patl_0080 04a8619c6864121ad02da51625a22760 476 Gene3D G3DSA:3.40.50.2000 248 457 3.3E-161 T 11-10-2018 Patl_0080 04a8619c6864121ad02da51625a22760 476 Hamap MF_00484 Glycogen synthase [glgA]. 1 473 39.067 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Patl_0080 04a8619c6864121ad02da51625a22760 476 SUPERFAMILY SSF53756 2 475 2.79E-116 T 11-10-2018 Patl_2306 70a2aecee102da3c1df2c08ae0daeb43 291 SMART SM00342 195 278 1.6E-24 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_2306 70a2aecee102da3c1df2c08ae0daeb43 291 Pfam PF12833 Helix-turn-helix domain 202 279 2.2E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_2306 70a2aecee102da3c1df2c08ae0daeb43 291 SUPERFAMILY SSF46689 232 282 2.44E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_2306 70a2aecee102da3c1df2c08ae0daeb43 291 Gene3D G3DSA:1.10.10.60 184 227 2.2E-6 T 11-10-2018 Patl_2306 70a2aecee102da3c1df2c08ae0daeb43 291 Gene3D G3DSA:1.10.10.60 228 284 1.0E-15 T 11-10-2018 Patl_2306 70a2aecee102da3c1df2c08ae0daeb43 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 4.8E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Patl_2306 70a2aecee102da3c1df2c08ae0daeb43 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 4.8E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Patl_2306 70a2aecee102da3c1df2c08ae0daeb43 291 SUPERFAMILY SSF46689 179 229 6.27E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0587 2082d22574599b327696bd0d09530699 229 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 225 2.6E-29 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Patl_0587 2082d22574599b327696bd0d09530699 229 Gene3D G3DSA:3.90.226.10 1 228 3.7E-64 T 11-10-2018 Patl_0587 2082d22574599b327696bd0d09530699 229 SUPERFAMILY SSF52096 3 224 1.51E-44 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_1664 fa5eca96258dd6a85e330470c4fe581c 717 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 627 710 5.5E-5 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Patl_1664 fa5eca96258dd6a85e330470c4fe581c 717 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 504 597 1.2E-23 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Patl_1664 fa5eca96258dd6a85e330470c4fe581c 717 SUPERFAMILY SSF48179 623 715 2.13E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_1664 fa5eca96258dd6a85e330470c4fe581c 717 SUPERFAMILY SSF52096 14 311 1.34E-65 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_1664 fa5eca96258dd6a85e330470c4fe581c 717 SUPERFAMILY SSF48179 504 603 4.51E-26 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_1664 fa5eca96258dd6a85e330470c4fe581c 717 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 501 526 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Patl_1664 fa5eca96258dd6a85e330470c4fe581c 717 Gene3D G3DSA:1.10.1040.50 507 710 5.7E-69 T 11-10-2018 Patl_1664 fa5eca96258dd6a85e330470c4fe581c 717 Pfam PF00378 Enoyl-CoA hydratase/isomerase 21 212 1.8E-40 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Patl_1664 fa5eca96258dd6a85e330470c4fe581c 717 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 14 715 0.0 T 11-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Patl_1664 fa5eca96258dd6a85e330470c4fe581c 717 Gene3D G3DSA:3.90.226.10 11 312 5.2E-98 T 11-10-2018 Patl_1664 fa5eca96258dd6a85e330470c4fe581c 717 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 113 133 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Patl_1664 fa5eca96258dd6a85e330470c4fe581c 717 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 322 501 4.9E-54 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Patl_1664 fa5eca96258dd6a85e330470c4fe581c 717 SUPERFAMILY SSF51735 320 501 1.75E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1664 fa5eca96258dd6a85e330470c4fe581c 717 Gene3D G3DSA:3.40.50.720 313 506 7.4E-60 T 11-10-2018 Patl_3505 e35d16a1f9870513e67bdc846d7369dd 298 SUPERFAMILY SSF53613 1 293 8.89E-64 T 11-10-2018 IPR029056 Ribokinase-like Patl_3505 e35d16a1f9870513e67bdc846d7369dd 298 PRINTS PR00990 Ribokinase signature 101 114 1.8E-25 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Patl_3505 e35d16a1f9870513e67bdc846d7369dd 298 PRINTS PR00990 Ribokinase signature 32 51 1.8E-25 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Patl_3505 e35d16a1f9870513e67bdc846d7369dd 298 PRINTS PR00990 Ribokinase signature 168 183 1.8E-25 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Patl_3505 e35d16a1f9870513e67bdc846d7369dd 298 PRINTS PR00990 Ribokinase signature 5 26 1.8E-25 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Patl_3505 e35d16a1f9870513e67bdc846d7369dd 298 PRINTS PR00990 Ribokinase signature 208 219 1.8E-25 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Patl_3505 e35d16a1f9870513e67bdc846d7369dd 298 Hamap MF_01987 Ribokinase [rbsK]. 1 292 20.145 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 Patl_3505 e35d16a1f9870513e67bdc846d7369dd 298 Gene3D G3DSA:3.40.1190.20 1 298 2.0E-77 T 11-10-2018 IPR029056 Ribokinase-like Patl_3505 e35d16a1f9870513e67bdc846d7369dd 298 Pfam PF00294 pfkB family carbohydrate kinase 6 285 1.3E-41 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB Patl_1004 70909b3433703b7a4d963f3236aba106 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.9E-74 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Patl_1004 70909b3433703b7a4d963f3236aba106 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.148 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Patl_1004 70909b3433703b7a4d963f3236aba106 177 Gene3D G3DSA:3.90.930.12 1 82 4.0E-26 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1004 70909b3433703b7a4d963f3236aba106 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.0E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Patl_1004 70909b3433703b7a4d963f3236aba106 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.0E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Patl_1004 70909b3433703b7a4d963f3236aba106 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.0E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Patl_1004 70909b3433703b7a4d963f3236aba106 177 Gene3D G3DSA:3.90.930.12 83 177 4.0E-41 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1004 70909b3433703b7a4d963f3236aba106 177 Pfam PF00347 Ribosomal protein L6 13 82 7.9E-16 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1004 70909b3433703b7a4d963f3236aba106 177 Pfam PF00347 Ribosomal protein L6 91 164 2.3E-20 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1004 70909b3433703b7a4d963f3236aba106 177 SUPERFAMILY SSF56053 1 82 1.76E-20 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1004 70909b3433703b7a4d963f3236aba106 177 SUPERFAMILY SSF56053 83 177 2.49E-38 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1004 70909b3433703b7a4d963f3236aba106 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1004 70909b3433703b7a4d963f3236aba106 177 PIRSF PIRSF002162 1 177 1.1E-40 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 SUPERFAMILY SSF50249 385 469 8.21E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 SUPERFAMILY SSF50249 211 299 2.98E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 PRINTS PR00681 Ribosomal protein S1 signature 61 75 7.7E-96 T 11-10-2018 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 PRINTS PR00681 Ribosomal protein S1 signature 130 146 7.7E-96 T 11-10-2018 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 PRINTS PR00681 Ribosomal protein S1 signature 312 331 7.7E-96 T 11-10-2018 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 PRINTS PR00681 Ribosomal protein S1 signature 43 61 7.7E-96 T 11-10-2018 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 PRINTS PR00681 Ribosomal protein S1 signature 106 125 7.7E-96 T 11-10-2018 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 PRINTS PR00681 Ribosomal protein S1 signature 148 165 7.7E-96 T 11-10-2018 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 PRINTS PR00681 Ribosomal protein S1 signature 352 370 7.7E-96 T 11-10-2018 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 PRINTS PR00681 Ribosomal protein S1 signature 177 197 7.7E-96 T 11-10-2018 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 PRINTS PR00681 Ribosomal protein S1 signature 234 255 7.7E-96 T 11-10-2018 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 SUPERFAMILY SSF50249 24 134 1.2E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 Pfam PF00575 S1 RNA binding domain 212 282 1.6E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 Pfam PF00575 S1 RNA binding domain 471 542 8.6E-13 T 11-10-2018 IPR003029 S1 domain GO:0003676 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 Pfam PF00575 S1 RNA binding domain 41 108 6.8E-6 T 11-10-2018 IPR003029 S1 domain GO:0003676 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 Pfam PF00575 S1 RNA binding domain 297 369 7.6E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 Pfam PF00575 S1 RNA binding domain 384 456 8.0E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 Pfam PF00575 S1 RNA binding domain 128 193 1.7E-8 T 11-10-2018 IPR003029 S1 domain GO:0003676 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 Gene3D G3DSA:2.40.50.140 28 119 2.5E-17 T 11-10-2018 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 Gene3D G3DSA:2.40.50.140 120 203 3.3E-6 T 11-10-2018 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 Gene3D G3DSA:2.40.50.140 380 465 2.1E-25 T 11-10-2018 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 Gene3D G3DSA:2.40.50.140 291 379 1.9E-31 T 11-10-2018 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 SUPERFAMILY SSF50249 277 393 3.15E-30 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 SUPERFAMILY SSF50249 128 207 2.62E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 SMART SM00316 212 282 1.7E-27 T 11-10-2018 IPR022967 RNA-binding domain, S1 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 SMART SM00316 471 542 5.4E-18 T 11-10-2018 IPR022967 RNA-binding domain, S1 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 SMART SM00316 297 369 9.0E-26 T 11-10-2018 IPR022967 RNA-binding domain, S1 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 SMART SM00316 125 193 5.7E-5 T 11-10-2018 IPR022967 RNA-binding domain, S1 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 SMART SM00316 41 109 5.8E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 SMART SM00316 384 456 7.4E-22 T 11-10-2018 IPR022967 RNA-binding domain, S1 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 SUPERFAMILY SSF50249 451 559 2.39E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 25 542 4.8E-227 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 PIRSF PIRSF002111 9 556 1.3E-222 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 Gene3D G3DSA:2.40.50.140 209 290 3.6E-28 T 11-10-2018 Patl_2466 cac5b0d7771c6ab10303c703021374d2 579 Gene3D G3DSA:2.40.50.140 466 550 4.2E-19 T 11-10-2018 Patl_2610 54b98093c2d7bca99f7f08cb53ddfb77 93 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 27 72 9.6E-16 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Patl_2610 54b98093c2d7bca99f7f08cb53ddfb77 93 Pfam PF02416 mttA/Hcf106 family 28 76 9.1E-9 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Patl_2610 54b98093c2d7bca99f7f08cb53ddfb77 93 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 25 90 18.506 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Patl_0351 756cc380be8197669dcb8572fc5f4675 256 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 8 200 35.088 T 11-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 Patl_0351 756cc380be8197669dcb8572fc5f4675 256 Gene3D G3DSA:3.40.1280.10 5 204 5.5E-62 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Patl_0351 756cc380be8197669dcb8572fc5f4675 256 SUPERFAMILY SSF75217 9 190 3.09E-47 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Patl_0351 756cc380be8197669dcb8572fc5f4675 256 Pfam PF00588 SpoU rRNA Methylase family 26 164 2.6E-33 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Patl_0351 756cc380be8197669dcb8572fc5f4675 256 Pfam PF12105 SpoU, rRNA methylase, C-terminal 168 221 7.3E-24 T 11-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 SMART SM01274 80 260 5.4E-104 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 SUPERFAMILY SSF51735 270 561 5.25E-90 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 PIRSF PIRSF000106 2 562 4.6E-225 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 Pfam PF00390 Malic enzyme, N-terminal domain 80 260 3.5E-77 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 SUPERFAMILY SSF53223 7 269 1.01E-109 T 11-10-2018 Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 Gene3D G3DSA:3.40.50.10380 14 267 3.7E-114 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 Pfam PF03949 Malic enzyme, NAD binding domain 270 529 1.2E-97 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 Gene3D G3DSA:3.40.50.720 268 563 3.9E-102 T 11-10-2018 Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 SMART SM00919 270 530 3.0E-120 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 PRINTS PR00072 Malic enzyme signature 407 423 4.7E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 PRINTS PR00072 Malic enzyme signature 86 110 4.7E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 PRINTS PR00072 Malic enzyme signature 146 175 4.7E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 PRINTS PR00072 Malic enzyme signature 182 204 4.7E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 PRINTS PR00072 Malic enzyme signature 297 313 4.7E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 PRINTS PR00072 Malic enzyme signature 241 259 4.7E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 PRINTS PR00072 Malic enzyme signature 266 282 4.7E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Patl_0724 f0bb44aa907a18fd4e3935c87b591443 564 ProSitePatterns PS00331 Malic enzymes signature. 266 282 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 Patl_1815 4a5ad71c41757bc1eae4098ba881d6d1 131 Pfam PF12514 Protein of unknown function (DUF3718) 33 100 1.2E-23 T 11-10-2018 IPR022193 Protein of unknown function DUF3718 Patl_2135 faf038418f63345ba465f31d959fd8d9 435 Pfam PF00271 Helicase conserved C-terminal domain 233 338 1.1E-25 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_2135 faf038418f63345ba465f31d959fd8d9 435 SMART SM00487 20 221 8.9E-62 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_2135 faf038418f63345ba465f31d959fd8d9 435 Gene3D G3DSA:3.40.50.300 1 209 1.8E-74 T 11-10-2018 Patl_2135 faf038418f63345ba465f31d959fd8d9 435 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 433 50.029 T 11-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 Patl_2135 faf038418f63345ba465f31d959fd8d9 435 Gene3D G3DSA:3.40.50.300 213 402 2.1E-47 T 11-10-2018 Patl_2135 faf038418f63345ba465f31d959fd8d9 435 SUPERFAMILY SSF52540 73 358 4.78E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2135 faf038418f63345ba465f31d959fd8d9 435 SMART SM00490 257 338 1.7E-30 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_2135 faf038418f63345ba465f31d959fd8d9 435 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Patl_2135 faf038418f63345ba465f31d959fd8d9 435 Pfam PF00270 DEAD/DEAH box helicase 26 193 9.6E-47 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Patl_1516 e3d147b2e09d7b3b6121b974c33069c0 298 Pfam PF03466 LysR substrate binding domain 93 295 1.2E-26 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_1516 e3d147b2e09d7b3b6121b974c33069c0 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 4.9E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1516 e3d147b2e09d7b3b6121b974c33069c0 298 Gene3D G3DSA:1.10.10.10 4 90 3.5E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1516 e3d147b2e09d7b3b6121b974c33069c0 298 SUPERFAMILY SSF53850 92 296 1.55E-28 T 11-10-2018 Patl_1516 e3d147b2e09d7b3b6121b974c33069c0 298 Gene3D G3DSA:3.40.190.10 93 293 3.0E-43 T 11-10-2018 Patl_1516 e3d147b2e09d7b3b6121b974c33069c0 298 SUPERFAMILY SSF46785 5 87 1.52E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1516 e3d147b2e09d7b3b6121b974c33069c0 298 Gene3D G3DSA:3.40.190.10 166 270 3.0E-43 T 11-10-2018 Patl_3763 cf8f8ee7de7f937f05bff1213958605b 376 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Patl_3763 cf8f8ee7de7f937f05bff1213958605b 376 SMART SM00829 18 366 0.0022 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_3763 cf8f8ee7de7f937f05bff1213958605b 376 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 128 4.6E-25 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_3763 cf8f8ee7de7f937f05bff1213958605b 376 Pfam PF00107 Zinc-binding dehydrogenase 203 328 1.8E-25 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_3763 cf8f8ee7de7f937f05bff1213958605b 376 Gene3D G3DSA:3.90.180.10 13 367 1.3E-132 T 11-10-2018 Patl_3763 cf8f8ee7de7f937f05bff1213958605b 376 SUPERFAMILY SSF50129 5 199 1.35E-59 T 11-10-2018 IPR011032 GroES-like superfamily Patl_3763 cf8f8ee7de7f937f05bff1213958605b 376 Gene3D G3DSA:3.40.50.720 180 316 1.3E-132 T 11-10-2018 Patl_3763 cf8f8ee7de7f937f05bff1213958605b 376 SUPERFAMILY SSF51735 166 338 4.58E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0746 0d5383dab4cb3e0d8d940e0228c1563b 195 Gene3D G3DSA:3.30.1060.10 16 183 2.0E-48 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Patl_0746 0d5383dab4cb3e0d8d940e0228c1563b 195 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 21 179 28.257 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Patl_0746 0d5383dab4cb3e0d8d940e0228c1563b 195 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 24 172 8.9E-39 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Patl_0746 0d5383dab4cb3e0d8d940e0228c1563b 195 SUPERFAMILY SSF55068 10 185 1.24E-57 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Patl_0746 0d5383dab4cb3e0d8d940e0228c1563b 195 Pfam PF01625 Peptide methionine sulfoxide reductase 24 173 2.7E-45 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 SUPERFAMILY SSF82693 46 128 2.35E-20 T 11-10-2018 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 Gene3D G3DSA:3.30.70.1430 560 662 6.0E-255 T 11-10-2018 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 Gene3D G3DSA:3.30.70.1430 42 810 6.0E-255 T 11-10-2018 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 1.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1037 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 Gene3D G3DSA:3.30.70.1440 663 860 6.0E-255 T 11-10-2018 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 Gene3D G3DSA:1.20.1640.10 509 1030 6.0E-255 T 11-10-2018 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 SUPERFAMILY SSF82714 716 800 4.05E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 SUPERFAMILY SSF82714 185 269 8.76E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 SUPERFAMILY SSF82866 801 1035 7.72E-42 T 11-10-2018 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 SUPERFAMILY SSF82866 300 498 1.18E-37 T 11-10-2018 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 Gene3D G3DSA:3.30.2090.10 714 802 6.0E-255 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 Gene3D G3DSA:1.20.1640.10 12 508 6.0E-255 T 11-10-2018 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 Gene3D G3DSA:3.30.2090.10 181 272 6.0E-255 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 SUPERFAMILY SSF82693 137 328 1.15E-19 T 11-10-2018 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 Gene3D G3DSA:3.30.70.1320 135 330 6.0E-255 T 11-10-2018 Patl_2392 aadf3dfcd8ef1e22a2e6b60308a85b1c 1045 Pfam PF00873 AcrB/AcrD/AcrF family 6 1032 1.9E-223 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2158 3c42d1b8ae7929bd1def6230e05008f3 181 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 3.7E-36 T 11-10-2018 IPR001453 MoaB/Mog domain Patl_2158 3c42d1b8ae7929bd1def6230e05008f3 181 SMART SM00852 15 159 3.2E-29 T 11-10-2018 IPR001453 MoaB/Mog domain Patl_2158 3c42d1b8ae7929bd1def6230e05008f3 181 PIRSF PIRSF006443 1 166 5.6E-65 T 11-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 Patl_2158 3c42d1b8ae7929bd1def6230e05008f3 181 Gene3D G3DSA:3.40.980.10 3 173 2.9E-51 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Patl_2158 3c42d1b8ae7929bd1def6230e05008f3 181 Pfam PF00994 Probable molybdopterin binding domain 15 156 2.7E-33 T 11-10-2018 IPR001453 MoaB/Mog domain Patl_2158 3c42d1b8ae7929bd1def6230e05008f3 181 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 9 170 3.5E-80 T 11-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 Patl_2158 3c42d1b8ae7929bd1def6230e05008f3 181 SUPERFAMILY SSF53218 10 169 2.88E-47 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily Patl_1623 e4a0a4322b77be5cdb59a5342b36f48f 231 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 128 230 2.6E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1623 e4a0a4322b77be5cdb59a5342b36f48f 231 SUPERFAMILY SSF55874 66 231 9.82E-22 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1623 e4a0a4322b77be5cdb59a5342b36f48f 231 Gene3D G3DSA:3.30.565.10 83 231 6.9E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1623 e4a0a4322b77be5cdb59a5342b36f48f 231 PRINTS PR00344 Bacterial sensor protein C-terminal signature 156 170 1.2E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1623 e4a0a4322b77be5cdb59a5342b36f48f 231 PRINTS PR00344 Bacterial sensor protein C-terminal signature 187 205 1.2E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1623 e4a0a4322b77be5cdb59a5342b36f48f 231 PRINTS PR00344 Bacterial sensor protein C-terminal signature 217 230 1.2E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1623 e4a0a4322b77be5cdb59a5342b36f48f 231 SMART SM00387 121 231 2.2E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3905 2645eb5c29663a93af9008bb2719764a 211 Gene3D G3DSA:1.10.357.10 69 210 1.3E-27 T 11-10-2018 Patl_3905 2645eb5c29663a93af9008bb2719764a 211 Gene3D G3DSA:1.10.10.60 2 67 1.4E-17 T 11-10-2018 Patl_3905 2645eb5c29663a93af9008bb2719764a 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 4.3E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_3905 2645eb5c29663a93af9008bb2719764a 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 4.3E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_3905 2645eb5c29663a93af9008bb2719764a 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 66 5.0E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_3905 2645eb5c29663a93af9008bb2719764a 211 SUPERFAMILY SSF46689 11 89 6.67E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_3905 2645eb5c29663a93af9008bb2719764a 211 Pfam PF08362 YcdC-like protein, C-terminal region 70 207 2.1E-18 T 11-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 Patl_3905 2645eb5c29663a93af9008bb2719764a 211 SUPERFAMILY SSF48498 86 208 2.13E-24 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Patl_1038 2b81468c641762ed3221cefa315856b9 613 Pfam PF04545 Sigma-70, region 4 547 600 1.0E-18 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Patl_1038 2b81468c641762ed3221cefa315856b9 613 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 375 611 1.1E-120 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 Patl_1038 2b81468c641762ed3221cefa315856b9 613 PRINTS PR00046 Major sigma-70 factor signature 427 435 6.3E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_1038 2b81468c641762ed3221cefa315856b9 613 PRINTS PR00046 Major sigma-70 factor signature 572 587 6.3E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_1038 2b81468c641762ed3221cefa315856b9 613 PRINTS PR00046 Major sigma-70 factor signature 551 563 6.3E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_1038 2b81468c641762ed3221cefa315856b9 613 PRINTS PR00046 Major sigma-70 factor signature 587 598 6.3E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_1038 2b81468c641762ed3221cefa315856b9 613 PRINTS PR00046 Major sigma-70 factor signature 403 416 6.3E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_1038 2b81468c641762ed3221cefa315856b9 613 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 572 598 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_1038 2b81468c641762ed3221cefa315856b9 613 Gene3D G3DSA:1.10.220.120 1 64 9.5E-29 T 11-10-2018 Patl_1038 2b81468c641762ed3221cefa315856b9 613 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 403 416 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_1038 2b81468c641762ed3221cefa315856b9 613 Pfam PF03979 Sigma-70 factor, region 1.1 4 79 2.0E-29 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 Patl_1038 2b81468c641762ed3221cefa315856b9 613 Gene3D G3DSA:1.10.601.10 111 448 4.3E-138 T 11-10-2018 Patl_1038 2b81468c641762ed3221cefa315856b9 613 Pfam PF04546 Sigma-70, non-essential region 137 348 2.4E-68 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_1038 2b81468c641762ed3221cefa315856b9 613 Gene3D G3DSA:1.10.10.10 529 613 7.9E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1038 2b81468c641762ed3221cefa315856b9 613 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 3.7E-12 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_1038 2b81468c641762ed3221cefa315856b9 613 SUPERFAMILY SSF88659 452 525 3.93E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_1038 2b81468c641762ed3221cefa315856b9 613 Pfam PF04539 Sigma-70 region 3 458 533 1.3E-28 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Patl_1038 2b81468c641762ed3221cefa315856b9 613 Pfam PF04542 Sigma-70 region 2 379 448 1.7E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Patl_1038 2b81468c641762ed3221cefa315856b9 613 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 612 46.151 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 Patl_1038 2b81468c641762ed3221cefa315856b9 613 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 375 600 2.7E-37 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Patl_1038 2b81468c641762ed3221cefa315856b9 613 SUPERFAMILY SSF88946 113 446 1.04E-98 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Patl_1038 2b81468c641762ed3221cefa315856b9 613 Gene3D G3DSA:1.10.10.10 452 528 4.9E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1038 2b81468c641762ed3221cefa315856b9 613 SUPERFAMILY SSF88659 509 611 1.4E-25 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 SUPERFAMILY SSF50447 542 624 8.73E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 Pfam PF00009 Elongation factor Tu GTP binding domain 373 529 3.6E-35 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 SUPERFAMILY SSF46955 3 49 1.14E-8 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 288 868 6.2E-269 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 Gene3D G3DSA:3.40.50.10050 664 770 5.4E-37 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 295 345 3.9E-15 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 50 8.4E-6 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 SUPERFAMILY SSF52540 362 538 4.83E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 372 527 3.3E-34 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 SUPERFAMILY SSF50447 771 867 6.09E-33 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 Gene3D G3DSA:3.40.50.300 366 540 2.8E-71 T 11-10-2018 Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 Gene3D G3DSA:2.40.30.10 771 868 1.6E-33 T 11-10-2018 Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 ProSitePatterns PS01176 Initiation factor 2 signature. 820 842 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 Pfam PF11987 Translation-initiation factor 2 654 759 3.4E-36 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 SUPERFAMILY SSF52156 646 776 1.31E-36 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 95 4.0E-12 T 11-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 Gene3D G3DSA:2.40.30.10 541 659 1.6E-39 T 11-10-2018 Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 Gene3D G3DSA:3.30.56.50 2 50 1.4E-16 T 11-10-2018 Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 Pfam PF03144 Elongation factor Tu domain 2 790 856 3.6E-7 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Patl_1695 567dc3a8f5f373061a6491e7827b115f 869 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 867 17.322 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 Gene3D G3DSA:1.10.150.390 1301 1362 4.9E-29 T 11-10-2018 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1359 18.977 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 Pfam PF00623 RNA polymerase Rpb1, domain 2 405 485 1.1E-26 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 384 1.6E-7 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 2.3E-87 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 SUPERFAMILY SSF64484 16 1348 0.0 T 11-10-2018 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 2.8E-19 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 Gene3D G3DSA:2.40.50.100 1023 1112 2.9E-11 T 11-10-2018 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 SMART SM00663 235 514 1.6E-183 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1301 2.3E-78 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 Gene3D G3DSA:2.40.50.100 1137 1200 2.0E-62 T 11-10-2018 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.3E-27 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 Gene3D G3DSA:2.40.50.100 948 1022 1.8E-26 T 11-10-2018 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1352 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 Gene3D G3DSA:1.10.40.90 374 416 5.0E-22 T 11-10-2018 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 Gene3D G3DSA:1.10.274.100 490 640 1.0E-38 T 11-10-2018 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 Gene3D G3DSA:1.10.132.30 641 790 9.7E-67 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0599 d99538b69514b2386378dd433df63dc7 1395 Gene3D G3DSA:1.10.1790.20 1121 1299 2.0E-62 T 11-10-2018 Patl_2458 7c3eca8a5a8680f68b5b4bb7ae5421d7 445 Gene3D G3DSA:1.10.3710.10 344 445 8.0E-36 T 11-10-2018 Patl_2458 7c3eca8a5a8680f68b5b4bb7ae5421d7 445 SUPERFAMILY SSF52540 15 243 1.08E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2458 7c3eca8a5a8680f68b5b4bb7ae5421d7 445 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 55 162 3.6E-17 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Patl_2458 7c3eca8a5a8680f68b5b4bb7ae5421d7 445 Pfam PF16193 AAA C-terminal domain 192 265 1.4E-24 T 11-10-2018 IPR032423 AAA C-terminal domain Patl_2458 7c3eca8a5a8680f68b5b4bb7ae5421d7 445 Pfam PF12002 MgsA AAA+ ATPase C terminal 266 430 7.3E-63 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal Patl_2458 7c3eca8a5a8680f68b5b4bb7ae5421d7 445 SUPERFAMILY SSF48019 250 432 2.38E-71 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Patl_2458 7c3eca8a5a8680f68b5b4bb7ae5421d7 445 SMART SM00382 51 168 5.7E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2458 7c3eca8a5a8680f68b5b4bb7ae5421d7 445 Gene3D G3DSA:1.20.272.10 240 343 1.9E-41 T 11-10-2018 Patl_2458 7c3eca8a5a8680f68b5b4bb7ae5421d7 445 Gene3D G3DSA:1.10.8.60 168 239 3.7E-15 T 11-10-2018 Patl_2458 7c3eca8a5a8680f68b5b4bb7ae5421d7 445 Gene3D G3DSA:3.40.50.300 7 167 6.4E-47 T 11-10-2018 Patl_1842 9b1fd573d4944529acad54979da2d9dc 526 Pfam PF16385 Domain of unknown function 415 512 9.3E-21 T 11-10-2018 IPR032158 Domain of unknown function DUF4994 Patl_1842 9b1fd573d4944529acad54979da2d9dc 526 ProSitePatterns PS00523 Sulfatases signature 1. 89 101 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_1842 9b1fd573d4944529acad54979da2d9dc 526 SUPERFAMILY SSF53649 40 520 2.88E-113 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_1842 9b1fd573d4944529acad54979da2d9dc 526 Gene3D G3DSA:3.30.1120.10 438 511 3.2E-104 T 11-10-2018 Patl_1842 9b1fd573d4944529acad54979da2d9dc 526 ProSitePatterns PS00149 Sulfatases signature 2. 135 145 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_1842 9b1fd573d4944529acad54979da2d9dc 526 Pfam PF00884 Sulfatase 43 410 1.5E-63 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_1842 9b1fd573d4944529acad54979da2d9dc 526 Gene3D G3DSA:3.40.720.10 43 437 3.2E-104 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_3204 39be919ed28846d61aea9d8328ea01a3 709 SUPERFAMILY SSF56935 146 288 2.05E-6 T 11-10-2018 Patl_3204 39be919ed28846d61aea9d8328ea01a3 709 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 44 702 1.9E-247 T 11-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH Patl_1170 486fa459084e18a78a2c658ecd9c07dd 211 Gene3D G3DSA:3.30.1950.10 52 118 1.6E-11 T 11-10-2018 Patl_1170 486fa459084e18a78a2c658ecd9c07dd 211 Gene3D G3DSA:3.10.560.10 119 208 5.3E-18 T 11-10-2018 Patl_1170 486fa459084e18a78a2c658ecd9c07dd 211 Pfam PF02563 Polysaccharide biosynthesis/export protein 44 116 1.1E-18 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Patl_2972 06c97c4cdfc2c0d3a4233d03f5725883 118 Pfam PF13564 DoxX-like family 12 102 2.9E-15 T 11-10-2018 IPR032808 DoxX family Patl_1995 913776baccafa71c70cfd0e04145cf15 506 Pfam PF03553 Na+/H+ antiporter family 170 477 3.4E-58 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Patl_1995 913776baccafa71c70cfd0e04145cf15 506 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 12 480 5.9E-140 T 11-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 Patl_1265 fbbcf7fe83bf80fefa1eb62c004ddee3 318 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 150 4.4E-62 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Patl_1265 fbbcf7fe83bf80fefa1eb62c004ddee3 318 Gene3D G3DSA:3.90.226.10 2 317 2.8E-115 T 11-10-2018 Patl_1265 fbbcf7fe83bf80fefa1eb62c004ddee3 318 SUPERFAMILY SSF52096 5 317 1.39E-101 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_1265 fbbcf7fe83bf80fefa1eb62c004ddee3 318 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 318 1.9E-159 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Patl_1265 fbbcf7fe83bf80fefa1eb62c004ddee3 318 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 318 50.388 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Patl_1265 fbbcf7fe83bf80fefa1eb62c004ddee3 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 90 101 1.7E-50 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Patl_1265 fbbcf7fe83bf80fefa1eb62c004ddee3 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 199 208 1.7E-50 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Patl_1265 fbbcf7fe83bf80fefa1eb62c004ddee3 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 171 184 1.7E-50 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Patl_1265 fbbcf7fe83bf80fefa1eb62c004ddee3 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 136 152 1.7E-50 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Patl_1265 fbbcf7fe83bf80fefa1eb62c004ddee3 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 155 168 1.7E-50 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Patl_1265 fbbcf7fe83bf80fefa1eb62c004ddee3 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 115 133 1.7E-50 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Patl_2456 48679e75046eb10107d3eaa94668b911 432 SUPERFAMILY SSF46589 1 112 1.26E-29 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Patl_2456 48679e75046eb10107d3eaa94668b911 432 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 6.4E-29 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Patl_2456 48679e75046eb10107d3eaa94668b911 432 PIRSF PIRSF001529 1 430 5.0E-177 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Patl_2456 48679e75046eb10107d3eaa94668b911 432 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 422 1.0E-169 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Patl_2456 48679e75046eb10107d3eaa94668b911 432 Gene3D G3DSA:3.30.930.10 105 431 4.3E-110 T 11-10-2018 Patl_2456 48679e75046eb10107d3eaa94668b911 432 SUPERFAMILY SSF55681 116 426 4.98E-97 T 11-10-2018 Patl_2456 48679e75046eb10107d3eaa94668b911 432 PRINTS PR00981 Seryl-tRNA synthetase signature 321 334 1.5E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Patl_2456 48679e75046eb10107d3eaa94668b911 432 PRINTS PR00981 Seryl-tRNA synthetase signature 281 294 1.5E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Patl_2456 48679e75046eb10107d3eaa94668b911 432 PRINTS PR00981 Seryl-tRNA synthetase signature 338 354 1.5E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Patl_2456 48679e75046eb10107d3eaa94668b911 432 PRINTS PR00981 Seryl-tRNA synthetase signature 356 372 1.5E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Patl_2456 48679e75046eb10107d3eaa94668b911 432 PRINTS PR00981 Seryl-tRNA synthetase signature 269 281 1.5E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Patl_2456 48679e75046eb10107d3eaa94668b911 432 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 427 39.616 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Patl_2456 48679e75046eb10107d3eaa94668b911 432 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 226 405 5.3E-30 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_2456 48679e75046eb10107d3eaa94668b911 432 Gene3D G3DSA:1.10.287.40 1 104 2.5E-20 T 11-10-2018 Patl_1741 e044c3841ab443ace9bb16e5ea3f5d01 108 Pfam PF03658 RnfH family Ubiquitin 6 88 1.5E-34 T 11-10-2018 IPR005346 RnfH protein Patl_1741 e044c3841ab443ace9bb16e5ea3f5d01 108 Gene3D G3DSA:3.10.20.280 1 90 3.9E-33 T 11-10-2018 IPR037021 RnfH superfamily Patl_1741 e044c3841ab443ace9bb16e5ea3f5d01 108 SUPERFAMILY SSF54285 5 80 8.11E-25 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Patl_1741 e044c3841ab443ace9bb16e5ea3f5d01 108 Hamap MF_00460 Protein RnfH [rnfH]. 6 96 25.804 T 11-10-2018 IPR005346 RnfH protein Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 Gene3D G3DSA:3.30.565.10 458 624 5.9E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 574 1.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 618 1.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 560 1.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 599 1.4E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 Gene3D G3DSA:3.40.50.2300 762 892 1.3E-34 T 11-10-2018 Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 SUPERFAMILY SSF47384 375 458 7.65E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 SMART SM00388 392 457 2.6E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 SMART SM01358 35 278 1.1E-27 T 11-10-2018 IPR032255 Helical bimodular sensor domain Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 Pfam PF00072 Response regulator receiver domain 775 885 1.4E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 SUPERFAMILY SSF52172 774 890 1.17E-31 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 Gene3D G3DSA:1.20.1480.50 268 366 1.6E-11 T 11-10-2018 Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 Pfam PF00512 His Kinase A (phospho-acceptor) domain 392 457 4.1E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 SMART SM00448 773 886 9.9E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 504 617 1.5E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 SUPERFAMILY SSF158472 308 354 2.35E-5 T 11-10-2018 Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 SUPERFAMILY SSF55874 446 619 7.2E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 Gene3D G3DSA:1.10.287.130 379 457 1.7E-22 T 11-10-2018 Patl_3723 d1b3a56ea1176b5bd81a9d8829237f78 903 SMART SM00387 504 621 5.9E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2248 ddfce0880beb04e6938a38b72d0e1ccc 331 SUPERFAMILY SSF109604 132 319 1.7E-42 T 11-10-2018 Patl_2248 ddfce0880beb04e6938a38b72d0e1ccc 331 Pfam PF00072 Response regulator receiver domain 11 121 6.3E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2248 ddfce0880beb04e6938a38b72d0e1ccc 331 Gene3D G3DSA:3.40.50.2300 2 132 2.3E-37 T 11-10-2018 Patl_2248 ddfce0880beb04e6938a38b72d0e1ccc 331 Gene3D G3DSA:1.10.3210.10 133 331 1.5E-76 T 11-10-2018 Patl_2248 ddfce0880beb04e6938a38b72d0e1ccc 331 Pfam PF01966 HD domain 156 278 1.5E-19 T 11-10-2018 IPR006674 HD domain Patl_2248 ddfce0880beb04e6938a38b72d0e1ccc 331 SMART SM00471 151 288 9.9E-9 T 11-10-2018 IPR003607 HD/PDEase domain Patl_2248 ddfce0880beb04e6938a38b72d0e1ccc 331 SMART SM00448 9 121 1.5E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2248 ddfce0880beb04e6938a38b72d0e1ccc 331 SUPERFAMILY SSF52172 7 136 1.57E-39 T 11-10-2018 IPR011006 CheY-like superfamily Patl_0402 c954973e685ca8ded8b840d319d7d41c 1124 SUPERFAMILY SSF48452 704 872 9.04E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0402 c954973e685ca8ded8b840d319d7d41c 1124 Gene3D G3DSA:3.40.50.300 151 338 3.2E-5 T 11-10-2018 Patl_0402 c954973e685ca8ded8b840d319d7d41c 1124 SUPERFAMILY SSF52540 148 381 8.88E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0402 c954973e685ca8ded8b840d319d7d41c 1124 Gene3D G3DSA:1.25.40.10 672 923 8.5E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0402 c954973e685ca8ded8b840d319d7d41c 1124 Pfam PF00486 Transcriptional regulatory protein, C terminal 31 107 1.7E-11 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_0402 c954973e685ca8ded8b840d319d7d41c 1124 Gene3D G3DSA:1.10.10.10 1 112 6.4E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0402 c954973e685ca8ded8b840d319d7d41c 1124 SMART SM00862 27 107 4.8E-13 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_0402 c954973e685ca8ded8b840d319d7d41c 1124 SUPERFAMILY SSF46894 8 108 9.07E-15 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_1535 329cb19eeb29eeda1a96fd4c433860ab 566 Gene3D G3DSA:1.20.1480.50 135 237 4.6E-7 T 11-10-2018 Patl_1535 329cb19eeb29eeda1a96fd4c433860ab 566 SUPERFAMILY SSF55874 382 560 1.57E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1535 329cb19eeb29eeda1a96fd4c433860ab 566 SMART SM00387 432 560 2.7E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1535 329cb19eeb29eeda1a96fd4c433860ab 566 SUPERFAMILY SSF58104 202 318 3.66E-5 T 11-10-2018 Patl_1535 329cb19eeb29eeda1a96fd4c433860ab 566 Gene3D G3DSA:3.30.565.10 393 563 1.1E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1535 329cb19eeb29eeda1a96fd4c433860ab 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 437 559 3.7E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1535 329cb19eeb29eeda1a96fd4c433860ab 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 538 2.0E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1535 329cb19eeb29eeda1a96fd4c433860ab 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 517 2.0E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1535 329cb19eeb29eeda1a96fd4c433860ab 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 503 2.0E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1535 329cb19eeb29eeda1a96fd4c433860ab 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 557 2.0E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1535 329cb19eeb29eeda1a96fd4c433860ab 566 Gene3D G3DSA:1.10.287.130 268 387 3.5E-25 T 11-10-2018 Patl_1535 329cb19eeb29eeda1a96fd4c433860ab 566 Pfam PF00512 His Kinase A (phospho-acceptor) domain 287 391 9.1E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1535 329cb19eeb29eeda1a96fd4c433860ab 566 SMART SM00304 174 231 6.0E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_1535 329cb19eeb29eeda1a96fd4c433860ab 566 Pfam PF00672 HAMP domain 175 227 1.9E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 SMART SM00388 431 496 1.5E-22 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 SUPERFAMILY SSF47226 900 1031 1.26E-18 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 Gene3D G3DSA:2.60.40.2380 37 174 3.6E-10 T 11-10-2018 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 Pfam PF07696 7TMR-DISM extracellular 2 43 170 3.7E-20 T 11-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 Pfam PF01627 Hpt domain 960 1032 1.5E-5 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 Pfam PF00072 Response regulator receiver domain 806 917 6.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 Gene3D G3DSA:1.10.287.130 395 494 1.7E-26 T 11-10-2018 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 Pfam PF00512 His Kinase A (phospho-acceptor) domain 432 496 9.9E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 SMART SM00448 804 917 1.4E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 Gene3D G3DSA:1.20.120.160 933 1042 1.3E-20 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 Gene3D G3DSA:3.30.565.10 495 661 2.8E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 SUPERFAMILY SSF47384 418 497 2.35E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 542 656 2.7E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 Pfam PF07695 7TM diverse intracellular signalling 183 388 9.8E-39 T 11-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 SUPERFAMILY SSF55874 485 655 3.41E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 SUPERFAMILY SSF52172 804 925 2.56E-35 T 11-10-2018 IPR011006 CheY-like superfamily Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 597 1.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 611 1.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 PRINTS PR00344 Bacterial sensor protein C-terminal signature 642 655 1.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 636 1.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 Gene3D G3DSA:3.40.50.2300 802 932 3.6E-37 T 11-10-2018 Patl_0507 ff56669c0bfd587e68de91b32c327869 1045 SMART SM00387 542 658 1.7E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1747 e56cd8a87d453aa58a35b8e0632de882 467 Pfam PF10996 Beta-Casp domain 255 382 2.3E-27 T 11-10-2018 IPR022712 Beta-Casp domain Patl_1747 e56cd8a87d453aa58a35b8e0632de882 467 SMART SM01027 255 383 1.9E-46 T 11-10-2018 IPR022712 Beta-Casp domain Patl_1747 e56cd8a87d453aa58a35b8e0632de882 467 SUPERFAMILY SSF56281 4 465 3.74E-122 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_1747 e56cd8a87d453aa58a35b8e0632de882 467 SMART SM00849 14 250 1.1E-11 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_1747 e56cd8a87d453aa58a35b8e0632de882 467 Gene3D G3DSA:3.40.50.10890 223 409 1.5E-139 T 11-10-2018 Patl_1747 e56cd8a87d453aa58a35b8e0632de882 467 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 398 459 7.2E-19 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Patl_1747 e56cd8a87d453aa58a35b8e0632de882 467 Gene3D G3DSA:3.60.15.10 7 443 1.5E-139 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_1747 e56cd8a87d453aa58a35b8e0632de882 467 Pfam PF16661 Metallo-beta-lactamase superfamily domain 27 174 3.4E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_1914 014a927ef068a2b21c602696cafba7cd 255 Gene3D G3DSA:3.40.50.720 4 254 4.0E-78 T 11-10-2018 Patl_1914 014a927ef068a2b21c602696cafba7cd 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_1914 014a927ef068a2b21c602696cafba7cd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 5.5E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1914 014a927ef068a2b21c602696cafba7cd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 5.5E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1914 014a927ef068a2b21c602696cafba7cd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.5E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1914 014a927ef068a2b21c602696cafba7cd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 5.5E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1914 014a927ef068a2b21c602696cafba7cd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 5.5E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1914 014a927ef068a2b21c602696cafba7cd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.5E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1914 014a927ef068a2b21c602696cafba7cd 255 SUPERFAMILY SSF51735 5 254 7.94E-74 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1914 014a927ef068a2b21c602696cafba7cd 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 4.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1914 014a927ef068a2b21c602696cafba7cd 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 4.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1914 014a927ef068a2b21c602696cafba7cd 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 4.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1914 014a927ef068a2b21c602696cafba7cd 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 253 3.2E-62 T 11-10-2018 Patl_2449 f788c9f6c863572f120532c69ae8a4c9 608 SMART SM00465 19 100 7.0E-23 T 11-10-2018 IPR000305 GIY-YIG endonuclease Patl_2449 f788c9f6c863572f120532c69ae8a4c9 608 Pfam PF14520 Helix-hairpin-helix domain 555 604 2.0E-6 T 11-10-2018 Patl_2449 f788c9f6c863572f120532c69ae8a4c9 608 SMART SM00278 554 573 0.82 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Patl_2449 f788c9f6c863572f120532c69ae8a4c9 608 SMART SM00278 586 605 54.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Patl_2449 f788c9f6c863572f120532c69ae8a4c9 608 SUPERFAMILY SSF82771 18 102 8.76E-25 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Patl_2449 f788c9f6c863572f120532c69ae8a4c9 608 Pfam PF01541 GIY-YIG catalytic domain 20 95 6.3E-11 T 11-10-2018 IPR000305 GIY-YIG endonuclease Patl_2449 f788c9f6c863572f120532c69ae8a4c9 608 Gene3D G3DSA:3.40.1440.10 6 104 3.2E-33 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Patl_2449 f788c9f6c863572f120532c69ae8a4c9 608 SUPERFAMILY SSF46600 193 245 3.92E-13 T 11-10-2018 IPR036876 UVR domain superfamily Patl_2449 f788c9f6c863572f120532c69ae8a4c9 608 Gene3D G3DSA:1.10.150.20 553 608 1.7E-21 T 11-10-2018 Patl_2449 f788c9f6c863572f120532c69ae8a4c9 608 SUPERFAMILY SSF47781 521 607 9.21E-21 T 11-10-2018 IPR010994 RuvA domain 2-like Patl_2449 f788c9f6c863572f120532c69ae8a4c9 608 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 540 5.7E-46 T 11-10-2018 IPR001162 UvrC family homology region Patl_2449 f788c9f6c863572f120532c69ae8a4c9 608 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 11 586 8.4E-205 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Patl_2449 f788c9f6c863572f120532c69ae8a4c9 608 Gene3D G3DSA:3.30.420.340 378 550 8.1E-47 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily Patl_2449 f788c9f6c863572f120532c69ae8a4c9 608 Hamap MF_00203 UvrABC system protein C [uvrC]. 6 605 27.954 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Patl_2449 f788c9f6c863572f120532c69ae8a4c9 608 Pfam PF02151 UvrB/uvrC motif 206 240 7.2E-9 T 11-10-2018 IPR001943 UVR domain GO:0005515 Patl_3051 7108b50b68ab5661e62b15a0c54aa31f 477 SUPERFAMILY SSF52172 2 175 2.36E-6 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3051 7108b50b68ab5661e62b15a0c54aa31f 477 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 217 232 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Patl_3051 7108b50b68ab5661e62b15a0c54aa31f 477 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 438 455 5.2E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_3051 7108b50b68ab5661e62b15a0c54aa31f 477 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 455 475 5.2E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_3051 7108b50b68ab5661e62b15a0c54aa31f 477 SUPERFAMILY SSF52540 131 371 5.44E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3051 7108b50b68ab5661e62b15a0c54aa31f 477 SMART SM00382 151 295 2.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3051 7108b50b68ab5661e62b15a0c54aa31f 477 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 155 168 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Patl_3051 7108b50b68ab5661e62b15a0c54aa31f 477 Gene3D G3DSA:1.10.8.60 303 378 5.5E-25 T 11-10-2018 Patl_3051 7108b50b68ab5661e62b15a0c54aa31f 477 Pfam PF00158 Sigma-54 interaction domain 131 297 2.7E-74 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Patl_3051 7108b50b68ab5661e62b15a0c54aa31f 477 Gene3D G3DSA:1.10.10.60 408 476 1.2E-12 T 11-10-2018 Patl_3051 7108b50b68ab5661e62b15a0c54aa31f 477 Pfam PF06490 Flagellar regulatory protein FleQ 3 109 1.7E-21 T 11-10-2018 IPR010518 Flagellar regulatory FleQ Patl_3051 7108b50b68ab5661e62b15a0c54aa31f 477 SUPERFAMILY SSF46689 423 475 1.16E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_3051 7108b50b68ab5661e62b15a0c54aa31f 477 Gene3D G3DSA:3.40.50.300 116 302 2.9E-68 T 11-10-2018 Patl_3051 7108b50b68ab5661e62b15a0c54aa31f 477 Pfam PF02954 Bacterial regulatory protein, Fis family 433 472 7.6E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_3269 f8a93681c37f6a4eeeac5ea2c09bab1a 366 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 353 4.3E-155 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Patl_3269 f8a93681c37f6a4eeeac5ea2c09bab1a 366 Gene3D G3DSA:3.40.718.10 1 365 1.2E-152 T 11-10-2018 Patl_3269 f8a93681c37f6a4eeeac5ea2c09bab1a 366 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 361 49.186 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Patl_3269 f8a93681c37f6a4eeeac5ea2c09bab1a 366 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 246 265 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Patl_3269 f8a93681c37f6a4eeeac5ea2c09bab1a 366 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 357 1.4E-129 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Patl_3269 f8a93681c37f6a4eeeac5ea2c09bab1a 366 SMART SM01329 5 357 5.0E-197 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Patl_3269 f8a93681c37f6a4eeeac5ea2c09bab1a 366 SUPERFAMILY SSF53659 2 360 2.88E-120 T 11-10-2018 Patl_0818 923e4605a7bc4fcb96cd5056f6f31dfb 293 SUPERFAMILY SSF46689 235 284 1.3E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0818 923e4605a7bc4fcb96cd5056f6f31dfb 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Patl_0818 923e4605a7bc4fcb96cd5056f6f31dfb 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 1.9E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Patl_0818 923e4605a7bc4fcb96cd5056f6f31dfb 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 1.9E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Patl_0818 923e4605a7bc4fcb96cd5056f6f31dfb 293 SMART SM00342 197 280 1.5E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_0818 923e4605a7bc4fcb96cd5056f6f31dfb 293 Gene3D G3DSA:1.10.10.2730 240 283 1.5E-16 T 11-10-2018 Patl_0818 923e4605a7bc4fcb96cd5056f6f31dfb 293 SUPERFAMILY SSF51215 53 161 7.06E-9 T 11-10-2018 IPR037923 Transcription regulator HTH-like Patl_0818 923e4605a7bc4fcb96cd5056f6f31dfb 293 Pfam PF02311 AraC-like ligand binding domain 55 161 2.7E-8 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Patl_0818 923e4605a7bc4fcb96cd5056f6f31dfb 293 Pfam PF12833 Helix-turn-helix domain 203 281 5.3E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_0818 923e4605a7bc4fcb96cd5056f6f31dfb 293 Gene3D G3DSA:1.10.10.60 183 239 1.8E-11 T 11-10-2018 Patl_0818 923e4605a7bc4fcb96cd5056f6f31dfb 293 SUPERFAMILY SSF46689 185 230 6.27E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1640 66debb18125da6c9e68fb5f34f7476ee 486 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 132 242 9.7E-22 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1640 66debb18125da6c9e68fb5f34f7476ee 486 SUPERFAMILY SSF51735 132 308 9.49E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1640 66debb18125da6c9e68fb5f34f7476ee 486 Gene3D G3DSA:3.40.50.720 133 467 2.3E-115 T 11-10-2018 Patl_1640 66debb18125da6c9e68fb5f34f7476ee 486 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 133 466 4.1E-113 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1640 66debb18125da6c9e68fb5f34f7476ee 486 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 290 297 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1640 66debb18125da6c9e68fb5f34f7476ee 486 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 286 304 3.5E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1640 66debb18125da6c9e68fb5f34f7476ee 486 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 369 386 3.5E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1640 66debb18125da6c9e68fb5f34f7476ee 486 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 250 263 3.5E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1640 66debb18125da6c9e68fb5f34f7476ee 486 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 313 329 3.5E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1640 66debb18125da6c9e68fb5f34f7476ee 486 SUPERFAMILY SSF55347 292 455 3.87E-52 T 11-10-2018 Patl_1640 66debb18125da6c9e68fb5f34f7476ee 486 Gene3D G3DSA:3.30.360.10 291 456 2.3E-115 T 11-10-2018 Patl_1640 66debb18125da6c9e68fb5f34f7476ee 486 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 297 454 4.2E-46 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1640 66debb18125da6c9e68fb5f34f7476ee 486 SMART SM00846 131 292 4.1E-55 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_2015 c8866f7189d6faafaf1c067c85269e6a 467 Pfam PF13286 Phosphohydrolase-associated domain 362 451 8.9E-27 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain Patl_2015 c8866f7189d6faafaf1c067c85269e6a 467 SMART SM00471 72 283 2.3E-10 T 11-10-2018 IPR003607 HD/PDEase domain Patl_2015 c8866f7189d6faafaf1c067c85269e6a 467 SUPERFAMILY SSF109604 35 457 2.24E-80 T 11-10-2018 Patl_2015 c8866f7189d6faafaf1c067c85269e6a 467 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 13 454 35.343 T 11-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 Patl_2015 c8866f7189d6faafaf1c067c85269e6a 467 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 38 454 1.3E-120 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 Patl_2015 c8866f7189d6faafaf1c067c85269e6a 467 Gene3D G3DSA:1.10.3210.10 2 213 5.2E-65 T 11-10-2018 Patl_2015 c8866f7189d6faafaf1c067c85269e6a 467 Gene3D G3DSA:1.10.3210.10 229 455 4.1E-40 T 11-10-2018 Patl_2015 c8866f7189d6faafaf1c067c85269e6a 467 Pfam PF01966 HD domain 76 157 2.1E-9 T 11-10-2018 IPR006674 HD domain Patl_1107 78b28b9fd3adf0f5d388b8520a3aeeb0 536 PRINTS PR00067 Catalase signature 142 160 1.3E-67 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_1107 78b28b9fd3adf0f5d388b8520a3aeeb0 536 PRINTS PR00067 Catalase signature 39 62 1.3E-67 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_1107 78b28b9fd3adf0f5d388b8520a3aeeb0 536 PRINTS PR00067 Catalase signature 123 140 1.3E-67 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_1107 78b28b9fd3adf0f5d388b8520a3aeeb0 536 PRINTS PR00067 Catalase signature 308 335 1.3E-67 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_1107 78b28b9fd3adf0f5d388b8520a3aeeb0 536 PRINTS PR00067 Catalase signature 102 120 1.3E-67 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_1107 78b28b9fd3adf0f5d388b8520a3aeeb0 536 PRINTS PR00067 Catalase signature 340 366 1.3E-67 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_1107 78b28b9fd3adf0f5d388b8520a3aeeb0 536 Pfam PF06628 Catalase-related immune-responsive 435 493 2.8E-15 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_1107 78b28b9fd3adf0f5d388b8520a3aeeb0 536 ProSitePatterns PS00438 Catalase proximal active site signature. 62 78 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_1107 78b28b9fd3adf0f5d388b8520a3aeeb0 536 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 353 361 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_1107 78b28b9fd3adf0f5d388b8520a3aeeb0 536 SUPERFAMILY SSF56634 19 504 2.88E-184 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_1107 78b28b9fd3adf0f5d388b8520a3aeeb0 536 PIRSF PIRSF038928 16 501 4.7E-173 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_1107 78b28b9fd3adf0f5d388b8520a3aeeb0 536 Pfam PF00199 Catalase 26 406 1.2E-167 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_1107 78b28b9fd3adf0f5d388b8520a3aeeb0 536 Gene3D G3DSA:2.40.180.10 22 511 3.5E-197 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Patl_1107 78b28b9fd3adf0f5d388b8520a3aeeb0 536 SMART SM01060 26 411 8.2E-240 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_3123 50af573f6d4be85eb8f7445c40bfe581 415 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 7 414 37.123 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB Patl_3123 50af573f6d4be85eb8f7445c40bfe581 415 Gene3D G3DSA:2.130.10.10 32 414 3.1E-95 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_3123 50af573f6d4be85eb8f7445c40bfe581 415 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 13 412 1.9E-118 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB Patl_3123 50af573f6d4be85eb8f7445c40bfe581 415 SMART SM00564 307 338 0.0072 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_3123 50af573f6d4be85eb8f7445c40bfe581 415 SMART SM00564 133 164 5.8E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_3123 50af573f6d4be85eb8f7445c40bfe581 415 SMART SM00564 217 249 180.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_3123 50af573f6d4be85eb8f7445c40bfe581 415 SMART SM00564 347 379 270.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_3123 50af573f6d4be85eb8f7445c40bfe581 415 SMART SM00564 269 300 26.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_3123 50af573f6d4be85eb8f7445c40bfe581 415 SMART SM00564 73 104 1.7E-4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_3123 50af573f6d4be85eb8f7445c40bfe581 415 SMART SM00564 173 204 0.006 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_3123 50af573f6d4be85eb8f7445c40bfe581 415 Pfam PF13360 PQQ-like domain 119 337 2.4E-45 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Patl_3123 50af573f6d4be85eb8f7445c40bfe581 415 Pfam PF13570 PQQ-like domain 387 412 0.0025 T 11-10-2018 IPR025666 Pyrrolo-quinoline quinone-like domain Patl_3123 50af573f6d4be85eb8f7445c40bfe581 415 SUPERFAMILY SSF50998 45 412 6.91E-75 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Patl_2662 43c721b16513bf15c0ab5d297919e1fe 640 Pfam PF00563 EAL domain 427 631 2.1E-32 T 11-10-2018 IPR001633 EAL domain Patl_2662 43c721b16513bf15c0ab5d297919e1fe 640 SMART SM00267 224 395 1.1E-4 T 11-10-2018 IPR000160 GGDEF domain Patl_2662 43c721b16513bf15c0ab5d297919e1fe 640 Gene3D G3DSA:3.30.1040.50 101 149 3.5E-9 T 11-10-2018 Patl_2662 43c721b16513bf15c0ab5d297919e1fe 640 SUPERFAMILY SSF55073 240 385 2.35E-7 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_2662 43c721b16513bf15c0ab5d297919e1fe 640 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 388 3.5E-10 T 11-10-2018 IPR000160 GGDEF domain Patl_2662 43c721b16513bf15c0ab5d297919e1fe 640 Gene3D G3DSA:3.20.20.450 410 635 3.1E-33 T 11-10-2018 IPR035919 EAL domain superfamily Patl_2662 43c721b16513bf15c0ab5d297919e1fe 640 Pfam PF16448 LapD/MoxY periplasmic domain 23 145 5.0E-32 T 11-10-2018 IPR032244 LapD/MoxY, periplasmic domain Patl_2662 43c721b16513bf15c0ab5d297919e1fe 640 SUPERFAMILY SSF141868 429 631 2.22E-33 T 11-10-2018 IPR035919 EAL domain superfamily Patl_2662 43c721b16513bf15c0ab5d297919e1fe 640 Gene3D G3DSA:3.30.70.270 218 393 4.4E-14 T 11-10-2018 Patl_2662 43c721b16513bf15c0ab5d297919e1fe 640 SMART SM00052 407 638 1.5E-7 T 11-10-2018 IPR001633 EAL domain Patl_1607 dce2db7a7cb919ed1830656f23b58b82 214 SUPERFAMILY SSF110997 135 206 5.1E-13 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Patl_1607 dce2db7a7cb919ed1830656f23b58b82 214 Gene3D G3DSA:3.30.70.1070 137 201 1.1E-6 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Patl_1607 dce2db7a7cb919ed1830656f23b58b82 214 Pfam PF05036 Sporulation related domain 136 189 2.5E-9 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 Patl_4169 a1f7cf7d06274ef716d08ce785de5c68 295 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 9 284 3.9E-23 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Patl_4169 a1f7cf7d06274ef716d08ce785de5c68 295 Gene3D G3DSA:3.30.420.40 8 115 3.0E-58 T 11-10-2018 Patl_4169 a1f7cf7d06274ef716d08ce785de5c68 295 Gene3D G3DSA:3.30.420.40 116 263 3.0E-58 T 11-10-2018 Patl_4169 a1f7cf7d06274ef716d08ce785de5c68 295 SUPERFAMILY SSF53067 118 285 1.01E-33 T 11-10-2018 Patl_4169 a1f7cf7d06274ef716d08ce785de5c68 295 SUPERFAMILY SSF53067 5 111 3.05E-16 T 11-10-2018 Patl_1005 11025d80fa94f3bc89b98a28e5267aea 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.071 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1005 11025d80fa94f3bc89b98a28e5267aea 117 Gene3D G3DSA:3.30.420.100 1 117 3.9E-44 T 11-10-2018 Patl_1005 11025d80fa94f3bc89b98a28e5267aea 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 7.8E-43 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1005 11025d80fa94f3bc89b98a28e5267aea 117 SUPERFAMILY SSF53137 3 115 3.49E-52 T 11-10-2018 Patl_1005 11025d80fa94f3bc89b98a28e5267aea 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 3.0E-43 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0509 7cba3900654ddad055b0fa6750b7b658 770 SUPERFAMILY SSF101904 501 745 5.62E-49 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Patl_0509 7cba3900654ddad055b0fa6750b7b658 770 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 471 3.5E-130 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Patl_0509 7cba3900654ddad055b0fa6750b7b658 770 SMART SM00434 15 465 2.6E-221 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Patl_0509 7cba3900654ddad055b0fa6750b7b658 770 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 32.994 T 11-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0509 7cba3900654ddad055b0fa6750b7b658 770 SUPERFAMILY SSF56719 35 487 3.4E-151 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Patl_0509 7cba3900654ddad055b0fa6750b7b658 770 Gene3D G3DSA:2.120.10.90 504 739 4.0E-10 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Patl_0509 7cba3900654ddad055b0fa6750b7b658 770 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 746 0.0 T 11-10-2018 Patl_0509 7cba3900654ddad055b0fa6750b7b658 770 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 697 1.8E-5 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Patl_0509 7cba3900654ddad055b0fa6750b7b658 770 Gene3D G3DSA:3.30.1360.40 242 335 1.2E-173 T 11-10-2018 Patl_0509 7cba3900654ddad055b0fa6750b7b658 770 Gene3D G3DSA:3.90.199.10 36 487 1.2E-173 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Patl_0509 7cba3900654ddad055b0fa6750b7b658 770 Gene3D G3DSA:1.10.268.10 373 458 1.2E-173 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Patl_4209 aff97945bc2ef28dec08e67364f0a135 266 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 51 66 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Patl_4209 aff97945bc2ef28dec08e67364f0a135 266 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 40 265 3.6E-88 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Patl_4209 aff97945bc2ef28dec08e67364f0a135 266 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 31 265 39.573 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Patl_4209 aff97945bc2ef28dec08e67364f0a135 266 Pfam PF01209 ubiE/COQ5 methyltransferase family 35 265 1.5E-103 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Patl_4209 aff97945bc2ef28dec08e67364f0a135 266 SUPERFAMILY SSF53335 31 263 9.76E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_4209 aff97945bc2ef28dec08e67364f0a135 266 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 173 187 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Patl_4209 aff97945bc2ef28dec08e67364f0a135 266 Gene3D G3DSA:3.40.50.150 46 266 5.1E-77 T 11-10-2018 Patl_1915 365780e280eeba84ef34dab4e8087897 306 SUPERFAMILY SSF53474 17 300 1.13E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1915 365780e280eeba84ef34dab4e8087897 306 Pfam PF00561 alpha/beta hydrolase fold 48 167 1.3E-21 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_1915 365780e280eeba84ef34dab4e8087897 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 73 88 5.1E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_1915 365780e280eeba84ef34dab4e8087897 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 5.1E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_1915 365780e280eeba84ef34dab4e8087897 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 133 146 5.1E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_1915 365780e280eeba84ef34dab4e8087897 306 Gene3D G3DSA:3.40.50.1820 2 302 1.1E-84 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1915 365780e280eeba84ef34dab4e8087897 306 PRINTS PR00412 Epoxide hydrolase signature 73 88 1.1E-16 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_1915 365780e280eeba84ef34dab4e8087897 306 PRINTS PR00412 Epoxide hydrolase signature 119 132 1.1E-16 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_1915 365780e280eeba84ef34dab4e8087897 306 PRINTS PR00412 Epoxide hydrolase signature 275 297 1.1E-16 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_1915 365780e280eeba84ef34dab4e8087897 306 PRINTS PR00412 Epoxide hydrolase signature 53 71 1.1E-16 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_2058 168969b182a37a840855cd014adee30f 242 Gene3D G3DSA:3.40.50.1220 9 229 1.1E-78 T 11-10-2018 Patl_2058 168969b182a37a840855cd014adee30f 242 Gene3D G3DSA:3.30.1600.10 23 159 1.1E-78 T 11-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily Patl_2058 168969b182a37a840855cd014adee30f 242 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 7 237 51.474 T 11-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 Patl_2058 168969b182a37a840855cd014adee30f 242 SUPERFAMILY SSF52467 6 235 3.69E-70 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Patl_2058 168969b182a37a840855cd014adee30f 242 Pfam PF02146 Sir2 family 14 187 2.0E-48 T 11-10-2018 IPR003000 Sirtuin family GO:0070403 Patl_1294 a8e603c3077c58568ff6b28f62eba0a3 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 2 285 17.664 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Patl_1294 a8e603c3077c58568ff6b28f62eba0a3 296 Gene3D G3DSA:1.10.357.140 14 179 3.0E-17 T 11-10-2018 Patl_1294 a8e603c3077c58568ff6b28f62eba0a3 296 Pfam PF01040 UbiA prenyltransferase family 19 255 1.8E-51 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Patl_1294 a8e603c3077c58568ff6b28f62eba0a3 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 281 2.3E-85 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Patl_1294 a8e603c3077c58568ff6b28f62eba0a3 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site Patl_1269 7594bd88d0834d20c38baa6e152bcd95 287 Pfam PF00990 Diguanylate cyclase, GGDEF domain 139 287 4.4E-40 T 11-10-2018 IPR000160 GGDEF domain Patl_1269 7594bd88d0834d20c38baa6e152bcd95 287 SUPERFAMILY SSF55073 144 287 3.92E-40 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_1269 7594bd88d0834d20c38baa6e152bcd95 287 SMART SM00267 128 287 8.5E-47 T 11-10-2018 IPR000160 GGDEF domain Patl_1269 7594bd88d0834d20c38baa6e152bcd95 287 Gene3D G3DSA:3.30.70.270 130 287 7.1E-46 T 11-10-2018 Patl_1269 7594bd88d0834d20c38baa6e152bcd95 287 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 137 287 3.6E-39 T 11-10-2018 IPR000160 GGDEF domain Patl_3218 e7c0dc061a4870c735c2b52fe8e4b9da 902 Pfam PF13692 Glycosyl transferases group 1 718 854 1.2E-21 T 11-10-2018 Patl_3218 e7c0dc061a4870c735c2b52fe8e4b9da 902 Pfam PF00535 Glycosyl transferase family 2 270 369 1.4E-18 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Patl_3218 e7c0dc061a4870c735c2b52fe8e4b9da 902 SUPERFAMILY SSF53756 557 888 2.83E-18 T 11-10-2018 Patl_3218 e7c0dc061a4870c735c2b52fe8e4b9da 902 SUPERFAMILY SSF53448 253 509 1.5E-44 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3218 e7c0dc061a4870c735c2b52fe8e4b9da 902 Gene3D G3DSA:3.90.550.10 253 488 6.5E-45 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3218 e7c0dc061a4870c735c2b52fe8e4b9da 902 Gene3D G3DSA:3.40.50.2000 706 875 8.9E-16 T 11-10-2018 Patl_2536 0010a99e74eb3a62371cfbaa2b00db90 256 Gene3D G3DSA:3.40.50.720 11 256 4.2E-88 T 11-10-2018 Patl_2536 0010a99e74eb3a62371cfbaa2b00db90 256 Pfam PF00899 ThiF family 17 249 2.1E-64 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Patl_2536 0010a99e74eb3a62371cfbaa2b00db90 256 SUPERFAMILY SSF69572 14 253 1.96E-85 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Patl_1132 691d2e1ba4dea278ac3dfece4b4dfcf3 241 Gene3D G3DSA:3.40.50.1240 5 234 3.5E-44 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Patl_1132 691d2e1ba4dea278ac3dfece4b4dfcf3 241 SUPERFAMILY SSF53254 12 234 3.4E-40 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Patl_1132 691d2e1ba4dea278ac3dfece4b4dfcf3 241 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 16 25 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Patl_1132 691d2e1ba4dea278ac3dfece4b4dfcf3 241 PIRSF PIRSF000709 5 85 2.8E-7 T 11-10-2018 Patl_1132 691d2e1ba4dea278ac3dfece4b4dfcf3 241 PIRSF PIRSF000709 191 218 7.3 T 11-10-2018 Patl_1132 691d2e1ba4dea278ac3dfece4b4dfcf3 241 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 14 117 1.5E-28 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Patl_1132 691d2e1ba4dea278ac3dfece4b4dfcf3 241 SMART SM00855 13 209 7.4E-23 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Patl_3459 6319ca4a95da56c62a06910983a51d62 582 SUPERFAMILY SSF56235 32 578 1.45E-142 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_3459 6319ca4a95da56c62a06910983a51d62 582 Pfam PF01019 Gamma-glutamyltranspeptidase 51 577 6.1E-135 T 11-10-2018 Patl_3459 6319ca4a95da56c62a06910983a51d62 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 133 151 3.5E-50 T 11-10-2018 Patl_3459 6319ca4a95da56c62a06910983a51d62 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 256 272 3.5E-50 T 11-10-2018 Patl_3459 6319ca4a95da56c62a06910983a51d62 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 458 473 3.5E-50 T 11-10-2018 Patl_3459 6319ca4a95da56c62a06910983a51d62 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 421 439 3.5E-50 T 11-10-2018 Patl_3459 6319ca4a95da56c62a06910983a51d62 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 151 170 3.5E-50 T 11-10-2018 Patl_3459 6319ca4a95da56c62a06910983a51d62 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 285 304 3.5E-50 T 11-10-2018 Patl_3459 6319ca4a95da56c62a06910983a51d62 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 58 83 3.5E-50 T 11-10-2018 Patl_3459 6319ca4a95da56c62a06910983a51d62 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 399 417 3.5E-50 T 11-10-2018 Patl_3459 6319ca4a95da56c62a06910983a51d62 582 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 483 500 3.5E-50 T 11-10-2018 Patl_3459 6319ca4a95da56c62a06910983a51d62 582 Gene3D G3DSA:1.10.246.130 273 397 2.2E-32 T 11-10-2018 Patl_3459 6319ca4a95da56c62a06910983a51d62 582 Gene3D G3DSA:3.60.20.40 399 580 2.5E-49 T 11-10-2018 Patl_3432 10c7b682369281506f7fdd85f6b392ae 428 SUPERFAMILY SSF53955 49 348 4.31E-97 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Patl_3432 10c7b682369281506f7fdd85f6b392ae 428 SUPERFAMILY SSF47090 362 421 1.88E-11 T 11-10-2018 IPR036365 PGBD-like superfamily Patl_3432 10c7b682369281506f7fdd85f6b392ae 428 Gene3D G3DSA:1.10.101.10 359 423 5.2E-10 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Patl_3432 10c7b682369281506f7fdd85f6b392ae 428 Gene3D G3DSA:1.10.530.10 95 343 7.5E-88 T 11-10-2018 Patl_3432 10c7b682369281506f7fdd85f6b392ae 428 Gene3D G3DSA:1.10.8.350 64 228 7.5E-88 T 11-10-2018 Patl_3432 10c7b682369281506f7fdd85f6b392ae 428 Pfam PF01471 Putative peptidoglycan binding domain 365 418 1.2E-7 T 11-10-2018 IPR002477 Peptidoglycan binding-like Patl_3432 10c7b682369281506f7fdd85f6b392ae 428 Pfam PF13406 Transglycosylase SLT domain 53 344 6.4E-110 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 Patl_3432 10c7b682369281506f7fdd85f6b392ae 428 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 53 348 6.7E-113 T 11-10-2018 IPR011970 Lytic murein transglycosylase Patl_0921 8573d86155ded02d249513a18239c928 342 SUPERFAMILY SSF51726 3 338 3.01E-67 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Patl_0921 8573d86155ded02d249513a18239c928 342 Gene3D G3DSA:3.20.20.210 1 342 5.9E-131 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Patl_0921 8573d86155ded02d249513a18239c928 342 PIRSF PIRSF005632 1 342 1.5E-190 T 11-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit Patl_0921 8573d86155ded02d249513a18239c928 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 6 328 5.2E-34 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 Patl_2686 9285dc5bb4efaaedb128365eda2f3c86 561 SUPERFAMILY SSF51905 1 557 2.85E-64 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2686 9285dc5bb4efaaedb128365eda2f3c86 561 Pfam PF00732 GMC oxidoreductase 87 312 9.6E-11 T 11-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Patl_2686 9285dc5bb4efaaedb128365eda2f3c86 561 Pfam PF05199 GMC oxidoreductase 425 548 5.9E-20 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Patl_2686 9285dc5bb4efaaedb128365eda2f3c86 561 SUPERFAMILY SSF54373 350 497 1.1E-51 T 11-10-2018 Patl_2686 9285dc5bb4efaaedb128365eda2f3c86 561 Gene3D G3DSA:3.50.50.60 473 559 8.9E-11 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2686 9285dc5bb4efaaedb128365eda2f3c86 561 Gene3D G3DSA:3.50.50.60 1 167 1.8E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2686 9285dc5bb4efaaedb128365eda2f3c86 561 Gene3D G3DSA:3.50.50.60 237 335 3.0E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2145 a974e750a6241c2723b9b1ead4c5b6bf 308 Pfam PF01012 Electron transfer flavoprotein domain 4 168 2.9E-40 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Patl_2145 a974e750a6241c2723b9b1ead4c5b6bf 308 SUPERFAMILY SSF52402 3 183 6.42E-56 T 11-10-2018 Patl_2145 a974e750a6241c2723b9b1ead4c5b6bf 308 Gene3D G3DSA:3.40.50.620 2 182 9.6E-58 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_2145 a974e750a6241c2723b9b1ead4c5b6bf 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 Patl_2145 a974e750a6241c2723b9b1ead4c5b6bf 308 SMART SM00893 3 181 2.0E-51 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Patl_2145 a974e750a6241c2723b9b1ead4c5b6bf 308 SUPERFAMILY SSF52467 188 307 8.88E-48 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Patl_2145 a974e750a6241c2723b9b1ead4c5b6bf 308 Gene3D G3DSA:3.40.50.1220 183 308 9.4E-58 T 11-10-2018 Patl_2145 a974e750a6241c2723b9b1ead4c5b6bf 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 5.1E-36 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Patl_2145 a974e750a6241c2723b9b1ead4c5b6bf 308 PIRSF PIRSF000089 1 308 1.5E-107 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Patl_3859 d686845ab3f86be33617608783f4c49a 350 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 4 343 27.543 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_3859 d686845ab3f86be33617608783f4c49a 350 SUPERFAMILY SSF55120 3 340 1.58E-91 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_3859 d686845ab3f86be33617608783f4c49a 350 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 3 169 9.6E-41 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_3859 d686845ab3f86be33617608783f4c49a 350 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 192 338 3.4E-21 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_3859 d686845ab3f86be33617608783f4c49a 350 Gene3D G3DSA:3.30.2350.20 16 338 5.7E-113 T 11-10-2018 Patl_3859 d686845ab3f86be33617608783f4c49a 350 Gene3D G3DSA:3.30.2340.10 171 303 5.7E-113 T 11-10-2018 Patl_2110 075f06e18e5e89db891d456c5d6d8e67 489 Gene3D G3DSA:1.20.5.320 442 489 4.9E-25 T 11-10-2018 Patl_2110 075f06e18e5e89db891d456c5d6d8e67 489 SMART SM01350 186 476 1.4E-222 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Patl_2110 075f06e18e5e89db891d456c5d6d8e67 489 SUPERFAMILY SSF48179 184 479 1.7E-129 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_2110 075f06e18e5e89db891d456c5d6d8e67 489 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 6 476 1.4E-231 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Patl_2110 075f06e18e5e89db891d456c5d6d8e67 489 PIRSF PIRSF000109 1 484 1.3E-240 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Patl_2110 075f06e18e5e89db891d456c5d6d8e67 489 SUPERFAMILY SSF51735 6 168 3.33E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2110 075f06e18e5e89db891d456c5d6d8e67 489 Gene3D G3DSA:1.10.1040.10 188 441 7.4E-108 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Patl_2110 075f06e18e5e89db891d456c5d6d8e67 489 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 186 475 8.8E-132 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Patl_2110 075f06e18e5e89db891d456c5d6d8e67 489 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 260 272 - T 11-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Patl_2110 075f06e18e5e89db891d456c5d6d8e67 489 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 5 28 8.1E-70 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Patl_2110 075f06e18e5e89db891d456c5d6d8e67 489 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 175 203 8.1E-70 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Patl_2110 075f06e18e5e89db891d456c5d6d8e67 489 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 256 283 8.1E-70 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Patl_2110 075f06e18e5e89db891d456c5d6d8e67 489 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 363 385 8.1E-70 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Patl_2110 075f06e18e5e89db891d456c5d6d8e67 489 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 68 97 8.1E-70 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Patl_2110 075f06e18e5e89db891d456c5d6d8e67 489 Gene3D G3DSA:3.40.50.720 1 187 1.5E-52 T 11-10-2018 Patl_2110 075f06e18e5e89db891d456c5d6d8e67 489 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 166 4.3E-50 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Patl_2540 46eb43c86696eeca7185c92e195b3127 265 SMART SM00062 37 261 5.3E-4 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_2540 46eb43c86696eeca7185c92e195b3127 265 Gene3D G3DSA:3.40.190.10 122 217 1.0E-21 T 11-10-2018 Patl_2540 46eb43c86696eeca7185c92e195b3127 265 SUPERFAMILY SSF53850 57 257 4.71E-26 T 11-10-2018 Patl_2540 46eb43c86696eeca7185c92e195b3127 265 Gene3D G3DSA:3.40.190.10 57 255 1.0E-21 T 11-10-2018 Patl_2540 46eb43c86696eeca7185c92e195b3127 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 58 256 1.0E-17 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_2896 bbf131ee5645525d566fd8b5aee7c371 99 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 95 5.1E-33 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Patl_2896 bbf131ee5645525d566fd8b5aee7c371 99 PIRSF PIRSF004555 1 99 2.6E-37 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Patl_2896 bbf131ee5645525d566fd8b5aee7c371 99 SUPERFAMILY SSF82607 1 93 4.32E-36 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Patl_2896 bbf131ee5645525d566fd8b5aee7c371 99 Gene3D G3DSA:3.30.1310.10 1 99 9.0E-42 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Patl_2896 bbf131ee5645525d566fd8b5aee7c371 99 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 1 88 21.577 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Patl_2896 bbf131ee5645525d566fd8b5aee7c371 99 Pfam PF02575 YbaB/EbfC DNA-binding family 1 89 6.0E-34 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Patl_2720 1a12e6565a9ce11d88e9283a307a1f15 102 Gene3D G3DSA:3.30.70.100 1 102 1.3E-19 T 11-10-2018 Patl_2720 1a12e6565a9ce11d88e9283a307a1f15 102 SUPERFAMILY SSF54909 1 100 2.57E-5 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_2720 1a12e6565a9ce11d88e9283a307a1f15 102 Pfam PF11639 REDY-like protein HapK 1 92 8.8E-11 T 11-10-2018 IPR021667 REDY-like protein HapK Patl_4158 2115fdc85ba1978c019f6e803c9ba837 488 SUPERFAMILY SSF56059 274 478 1.86E-39 T 11-10-2018 Patl_4158 2115fdc85ba1978c019f6e803c9ba837 488 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 25 173 1.8E-38 T 11-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain Patl_4158 2115fdc85ba1978c019f6e803c9ba837 488 Gene3D G3DSA:3.40.50.20 211 298 3.8E-5 T 11-10-2018 Patl_4158 2115fdc85ba1978c019f6e803c9ba837 488 Gene3D G3DSA:3.30.1490.20 299 365 4.5E-7 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Patl_4158 2115fdc85ba1978c019f6e803c9ba837 488 Pfam PF08443 RimK-like ATP-grasp domain 288 461 1.3E-9 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 Patl_4158 2115fdc85ba1978c019f6e803c9ba837 488 Gene3D G3DSA:3.30.470.20 366 480 1.4E-19 T 11-10-2018 Patl_1518 99481c8a3b51ded6782a6fffe6806247 490 Pfam PF07687 Peptidase dimerisation domain 220 313 4.9E-9 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain Patl_1518 99481c8a3b51ded6782a6fffe6806247 490 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 44 442 1.1E-71 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 Patl_1518 99481c8a3b51ded6782a6fffe6806247 490 SUPERFAMILY SSF55031 222 327 1.05E-20 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Patl_1518 99481c8a3b51ded6782a6fffe6806247 490 PIRSF PIRSF037227 23 490 4.9E-161 T 11-10-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B Patl_1518 99481c8a3b51ded6782a6fffe6806247 490 SUPERFAMILY SSF53187 32 457 5.03E-55 T 11-10-2018 Patl_1518 99481c8a3b51ded6782a6fffe6806247 490 Pfam PF01546 Peptidase family M20/M25/M40 112 359 7.7E-9 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 Patl_1260 19bada37ba1fbec14aa5df5431fd507f 148 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 9 145 6.4E-57 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Patl_1260 19bada37ba1fbec14aa5df5431fd507f 148 SUPERFAMILY SSF54637 7 146 3.06E-47 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_1260 19bada37ba1fbec14aa5df5431fd507f 148 Gene3D G3DSA:3.10.129.10 2 148 6.2E-59 T 11-10-2018 Patl_1260 19bada37ba1fbec14aa5df5431fd507f 148 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 147 34.882 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Patl_1260 19bada37ba1fbec14aa5df5431fd507f 148 Pfam PF07977 FabA-like domain 17 140 5.0E-35 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Patl_0977 b2faf40eb062256dd3bc5479e44a26b5 436 PIRSF PIRSF000423 2 436 2.6E-182 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Patl_0977 b2faf40eb062256dd3bc5479e44a26b5 436 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 436 203.105 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Patl_0977 b2faf40eb062256dd3bc5479e44a26b5 436 SUPERFAMILY SSF55729 291 412 2.84E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_0977 b2faf40eb062256dd3bc5479e44a26b5 436 Gene3D G3DSA:3.40.630.30 288 436 1.3E-36 T 11-10-2018 Patl_0977 b2faf40eb062256dd3bc5479e44a26b5 436 Pfam PF00583 Acetyltransferase (GNAT) family 322 397 9.8E-6 T 11-10-2018 IPR000182 GNAT domain Patl_0977 b2faf40eb062256dd3bc5479e44a26b5 436 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 9 436 1.1E-182 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 Patl_0977 b2faf40eb062256dd3bc5479e44a26b5 436 Pfam PF00696 Amino acid kinase family 25 227 2.5E-26 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Patl_0977 b2faf40eb062256dd3bc5479e44a26b5 436 SUPERFAMILY SSF53633 4 286 3.63E-65 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Patl_0977 b2faf40eb062256dd3bc5479e44a26b5 436 Gene3D G3DSA:3.40.1160.10 7 287 6.9E-86 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Patl_2501 df9596d12e0ce91e4d15b3c259484f56 247 Gene3D G3DSA:3.40.50.720 1 243 6.9E-60 T 11-10-2018 Patl_2501 df9596d12e0ce91e4d15b3c259484f56 247 SUPERFAMILY SSF51735 4 241 7.58E-63 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2501 df9596d12e0ce91e4d15b3c259484f56 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 7.0E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2501 df9596d12e0ce91e4d15b3c259484f56 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 7.0E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2501 df9596d12e0ce91e4d15b3c259484f56 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.0E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2501 df9596d12e0ce91e4d15b3c259484f56 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 7.0E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2501 df9596d12e0ce91e4d15b3c259484f56 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 7.0E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2501 df9596d12e0ce91e4d15b3c259484f56 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.0E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2501 df9596d12e0ce91e4d15b3c259484f56 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_2501 df9596d12e0ce91e4d15b3c259484f56 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 238 2.2E-42 T 11-10-2018 Patl_2501 df9596d12e0ce91e4d15b3c259484f56 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.1E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2501 df9596d12e0ce91e4d15b3c259484f56 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.1E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2501 df9596d12e0ce91e4d15b3c259484f56 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.1E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0672 6912ff7a6e4088b48f7e5d88c40bdf73 410 Gene3D G3DSA:3.30.160.390 1 104 5.4E-13 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily Patl_0672 6912ff7a6e4088b48f7e5d88c40bdf73 410 SUPERFAMILY SSF56349 104 398 8.54E-32 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Patl_0672 6912ff7a6e4088b48f7e5d88c40bdf73 410 Gene3D G3DSA:1.10.443.10 217 400 8.2E-10 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Patl_0672 6912ff7a6e4088b48f7e5d88c40bdf73 410 Pfam PF00589 Phage integrase family 221 375 1.7E-5 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Patl_0672 6912ff7a6e4088b48f7e5d88c40bdf73 410 Pfam PF13356 Arm DNA-binding domain 2 92 1.3E-8 T 11-10-2018 IPR025166 Integrase, DNA-binding domain Patl_1400 1d6e1eb9de24509787f6162c62dd7431 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 100 117 2.8E-52 T 11-10-2018 Patl_1400 1d6e1eb9de24509787f6162c62dd7431 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 170 197 2.8E-52 T 11-10-2018 Patl_1400 1d6e1eb9de24509787f6162c62dd7431 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 81 99 2.8E-52 T 11-10-2018 Patl_1400 1d6e1eb9de24509787f6162c62dd7431 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 144 163 2.8E-52 T 11-10-2018 Patl_1400 1d6e1eb9de24509787f6162c62dd7431 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 229 246 2.8E-52 T 11-10-2018 Patl_1400 1d6e1eb9de24509787f6162c62dd7431 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 41 59 2.8E-52 T 11-10-2018 Patl_1400 1d6e1eb9de24509787f6162c62dd7431 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 62 80 2.8E-52 T 11-10-2018 Patl_1400 1d6e1eb9de24509787f6162c62dd7431 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 200 226 2.8E-52 T 11-10-2018 Patl_1400 1d6e1eb9de24509787f6162c62dd7431 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 247 266 2.8E-52 T 11-10-2018 Patl_1400 1d6e1eb9de24509787f6162c62dd7431 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 119 141 2.8E-52 T 11-10-2018 Patl_1400 1d6e1eb9de24509787f6162c62dd7431 287 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 267 287 2.8E-52 T 11-10-2018 Patl_1400 1d6e1eb9de24509787f6162c62dd7431 287 SUPERFAMILY SSF103088 155 283 1.96E-27 T 11-10-2018 IPR036737 OmpA-like domain superfamily Patl_1400 1d6e1eb9de24509787f6162c62dd7431 287 Gene3D G3DSA:2.60.40.2540 19 171 2.1E-50 T 11-10-2018 Patl_1400 1d6e1eb9de24509787f6162c62dd7431 287 Pfam PF00691 OmpA family 183 278 6.3E-17 T 11-10-2018 IPR006665 OmpA-like domain Patl_1400 1d6e1eb9de24509787f6162c62dd7431 287 Gene3D G3DSA:3.30.1330.60 172 287 7.6E-32 T 11-10-2018 IPR036737 OmpA-like domain superfamily Patl_0783 01dd9d5161200a62b127e034c1ad8437 528 Pfam PF14240 YHYH protein 272 384 2.6E-17 T 11-10-2018 IPR025924 YHYH domain Patl_0783 01dd9d5161200a62b127e034c1ad8437 528 Gene3D G3DSA:2.60.40.10 51 132 7.0E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_1056 ccaf5717870649aefabbb97b29ca2e81 888 SUPERFAMILY SSF56935 24 888 2.99E-69 T 11-10-2018 Patl_1056 ccaf5717870649aefabbb97b29ca2e81 888 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 144 3.9E-6 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1056 ccaf5717870649aefabbb97b29ca2e81 888 Gene3D G3DSA:2.40.170.20 256 888 2.7E-30 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_1056 ccaf5717870649aefabbb97b29ca2e81 888 Gene3D G3DSA:2.170.130.10 24 158 5.6E-7 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_1056 ccaf5717870649aefabbb97b29ca2e81 888 Pfam PF00593 TonB dependent receptor 418 886 2.6E-19 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1087 9af75f9dc76782da24646692fa7e7135 330 Gene3D G3DSA:3.40.50.720 4 312 3.6E-99 T 11-10-2018 Patl_1087 9af75f9dc76782da24646692fa7e7135 330 SUPERFAMILY SSF51735 1 329 9.8E-87 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1087 9af75f9dc76782da24646692fa7e7135 330 Gene3D G3DSA:3.90.25.10 180 324 3.6E-99 T 11-10-2018 Patl_1087 9af75f9dc76782da24646692fa7e7135 330 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 319 3.3E-58 T 11-10-2018 IPR016040 NAD(P)-binding domain Patl_1087 9af75f9dc76782da24646692fa7e7135 330 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 6.0E-29 T 11-10-2018 Patl_1087 9af75f9dc76782da24646692fa7e7135 330 PRINTS PR01713 Nucleotide sugar epimerase signature 291 308 6.0E-29 T 11-10-2018 Patl_1087 9af75f9dc76782da24646692fa7e7135 330 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 6.0E-29 T 11-10-2018 Patl_1087 9af75f9dc76782da24646692fa7e7135 330 PRINTS PR01713 Nucleotide sugar epimerase signature 252 267 6.0E-29 T 11-10-2018 Patl_1626 8dfe0e6ed24bf08718502ee02d786d30 197 Pfam PF00293 NUDIX domain 30 141 4.6E-12 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Patl_1626 8dfe0e6ed24bf08718502ee02d786d30 197 SUPERFAMILY SSF55811 29 182 2.17E-31 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Patl_1626 8dfe0e6ed24bf08718502ee02d786d30 197 ProSitePatterns PS01293 Nudix CoA signature. 47 67 - T 11-10-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918|Reactome: R-HSA-9033241 Patl_1626 8dfe0e6ed24bf08718502ee02d786d30 197 Gene3D G3DSA:3.90.79.10 12 188 2.0E-45 T 11-10-2018 Patl_2462 274609b1cfe80ec140af4cb297caefbc 376 Gene3D G3DSA:3.40.50.720 3 353 6.9E-137 T 11-10-2018 Patl_2462 274609b1cfe80ec140af4cb297caefbc 376 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.2E-47 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Patl_2462 274609b1cfe80ec140af4cb297caefbc 376 SMART SM01002 149 297 1.0E-87 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Patl_2462 274609b1cfe80ec140af4cb297caefbc 376 SUPERFAMILY SSF52283 1 360 7.23E-67 T 11-10-2018 Patl_2462 274609b1cfe80ec140af4cb297caefbc 376 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 11-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 Patl_2462 274609b1cfe80ec140af4cb297caefbc 376 PIRSF PIRSF000183 1 375 2.2E-153 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 Patl_2462 274609b1cfe80ec140af4cb297caefbc 376 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 373 7.3E-153 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 Patl_2462 274609b1cfe80ec140af4cb297caefbc 376 SUPERFAMILY SSF51735 137 303 2.75E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2462 274609b1cfe80ec140af4cb297caefbc 376 SMART SM01003 4 137 2.7E-78 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Patl_2462 274609b1cfe80ec140af4cb297caefbc 376 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 353 8.3E-83 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Patl_2462 274609b1cfe80ec140af4cb297caefbc 376 Gene3D G3DSA:3.40.50.720 130 305 6.9E-137 T 11-10-2018 Patl_0593 4c45aca652e587a619854b0a8350db07 190 Pfam PF02357 Transcription termination factor nusG 16 121 2.3E-25 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Patl_0593 4c45aca652e587a619854b0a8350db07 190 PRINTS PR00338 Transcription termination factor NUSG signature 166 182 1.3E-20 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Patl_0593 4c45aca652e587a619854b0a8350db07 190 PRINTS PR00338 Transcription termination factor NUSG signature 70 82 1.3E-20 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Patl_0593 4c45aca652e587a619854b0a8350db07 190 PRINTS PR00338 Transcription termination factor NUSG signature 148 163 1.3E-20 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Patl_0593 4c45aca652e587a619854b0a8350db07 190 SUPERFAMILY SSF50104 134 189 5.52E-19 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Patl_0593 4c45aca652e587a619854b0a8350db07 190 Gene3D G3DSA:3.30.70.940 10 130 1.6E-44 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Patl_0593 4c45aca652e587a619854b0a8350db07 190 Pfam PF00467 KOW motif 139 173 6.5E-9 T 11-10-2018 IPR005824 KOW Patl_0593 4c45aca652e587a619854b0a8350db07 190 ProSitePatterns PS01014 Transcription termination factor nusG signature. 173 182 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Patl_0593 4c45aca652e587a619854b0a8350db07 190 Gene3D G3DSA:2.30.30.30 131 189 8.2E-26 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Patl_0593 4c45aca652e587a619854b0a8350db07 190 SMART SM00739 136 163 2.4E-7 T 11-10-2018 IPR005824 KOW Patl_0593 4c45aca652e587a619854b0a8350db07 190 SUPERFAMILY SSF82679 16 126 2.75E-37 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Patl_0593 4c45aca652e587a619854b0a8350db07 190 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 18 189 3.6E-69 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Patl_0593 4c45aca652e587a619854b0a8350db07 190 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 15 190 23.568 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Patl_0593 4c45aca652e587a619854b0a8350db07 190 SMART SM00738 15 124 8.2E-45 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Patl_1698 bbccaed916655475f3d0daa3cd8a0a98 89 SUPERFAMILY SSF47060 3 89 1.85E-34 T 11-10-2018 IPR009068 S15/NS1, RNA-binding Patl_1698 bbccaed916655475f3d0daa3cd8a0a98 89 Pfam PF00312 Ribosomal protein S15 10 88 4.0E-37 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1698 bbccaed916655475f3d0daa3cd8a0a98 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 2.0E-39 T 11-10-2018 Patl_1698 bbccaed916655475f3d0daa3cd8a0a98 89 SMART SM01387 8 88 1.7E-51 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1698 bbccaed916655475f3d0daa3cd8a0a98 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 6.0E-39 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1698 bbccaed916655475f3d0daa3cd8a0a98 89 Gene3D G3DSA:1.10.287.10 2 89 1.1E-35 T 11-10-2018 Patl_1698 bbccaed916655475f3d0daa3cd8a0a98 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.659 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1698 bbccaed916655475f3d0daa3cd8a0a98 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_2149 c80c7da05ad755374eaa5164f7ced0e7 227 Pfam PF00561 alpha/beta hydrolase fold 6 214 9.7E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_2149 c80c7da05ad755374eaa5164f7ced0e7 227 PRINTS PR00412 Epoxide hydrolase signature 66 79 1.9E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_2149 c80c7da05ad755374eaa5164f7ced0e7 227 PRINTS PR00412 Epoxide hydrolase signature 52 65 1.9E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_2149 c80c7da05ad755374eaa5164f7ced0e7 227 PRINTS PR00412 Epoxide hydrolase signature 9 24 1.9E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_2149 c80c7da05ad755374eaa5164f7ced0e7 227 PRINTS PR00412 Epoxide hydrolase signature 202 224 1.9E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_2149 c80c7da05ad755374eaa5164f7ced0e7 227 Gene3D G3DSA:3.40.50.1820 1 226 1.9E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2149 c80c7da05ad755374eaa5164f7ced0e7 227 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 65 4.0E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_2149 c80c7da05ad755374eaa5164f7ced0e7 227 PRINTS PR00111 Alpha/beta hydrolase fold signature 9 24 4.0E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_2149 c80c7da05ad755374eaa5164f7ced0e7 227 PRINTS PR00111 Alpha/beta hydrolase fold signature 66 79 4.0E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_2149 c80c7da05ad755374eaa5164f7ced0e7 227 SUPERFAMILY SSF53474 4 226 9.59E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2018 83b5e1ea02c234f447d3ad9cc18aa521 83 Pfam PF01381 Helix-turn-helix 17 67 8.9E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_2018 83b5e1ea02c234f447d3ad9cc18aa521 83 Gene3D G3DSA:1.10.260.40 1 81 4.1E-21 T 11-10-2018 Patl_2018 83b5e1ea02c234f447d3ad9cc18aa521 83 SUPERFAMILY SSF47413 10 69 1.19E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_2018 83b5e1ea02c234f447d3ad9cc18aa521 83 SMART SM00530 16 71 4.0E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_4297 c873de69948bc93b4eeb0087072ac715 513 Gene3D G3DSA:3.40.50.300 94 382 2.2E-132 T 11-10-2018 Patl_4297 c873de69948bc93b4eeb0087072ac715 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.319 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4297 c873de69948bc93b4eeb0087072ac715 513 SUPERFAMILY SSF52540 96 381 2.53E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4297 c873de69948bc93b4eeb0087072ac715 513 SUPERFAMILY SSF50615 10 94 8.83E-25 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_4297 c873de69948bc93b4eeb0087072ac715 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 2.1E-45 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4297 c873de69948bc93b4eeb0087072ac715 513 SUPERFAMILY SSF47917 383 511 1.26E-46 T 11-10-2018 Patl_4297 c873de69948bc93b4eeb0087072ac715 513 Gene3D G3DSA:2.40.30.20 1 93 1.0E-27 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_4297 c873de69948bc93b4eeb0087072ac715 513 Gene3D G3DSA:1.20.150.20 383 513 5.9E-46 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4297 c873de69948bc93b4eeb0087072ac715 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_4297 c873de69948bc93b4eeb0087072ac715 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 8.6E-12 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_4297 c873de69948bc93b4eeb0087072ac715 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 1.8E-255 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4297 c873de69948bc93b4eeb0087072ac715 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.0E-73 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_2476 917c45c126eb40a7f7187bd6c71db59c 367 SUPERFAMILY SSF56104 21 345 8.83E-65 T 11-10-2018 Patl_2476 917c45c126eb40a7f7187bd6c71db59c 367 Gene3D G3DSA:3.30.200.20 13 127 5.6E-22 T 11-10-2018 Patl_2476 917c45c126eb40a7f7187bd6c71db59c 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 20.348 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Patl_2476 917c45c126eb40a7f7187bd6c71db59c 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 2.1E-205 T 11-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 Patl_2476 917c45c126eb40a7f7187bd6c71db59c 367 Pfam PF01259 SAICAR synthetase 22 291 1.8E-44 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Patl_2476 917c45c126eb40a7f7187bd6c71db59c 367 Gene3D G3DSA:3.30.470.20 128 284 1.3E-35 T 11-10-2018 Patl_0502 ed2938d5087afb36cab5a8abbb575e30 139 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 44 133 8.2E-28 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Patl_0502 ed2938d5087afb36cab5a8abbb575e30 139 Gene3D G3DSA:3.10.50.40 16 138 1.2E-38 T 11-10-2018 Patl_0502 ed2938d5087afb36cab5a8abbb575e30 139 SUPERFAMILY SSF54534 20 135 7.46E-39 T 11-10-2018 Patl_0588 f8bbd0fc57ac3d58a9f8b4d45dacbaac 459 Pfam PF03880 DbpA RNA binding domain 386 456 3.7E-23 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain Patl_0588 f8bbd0fc57ac3d58a9f8b4d45dacbaac 459 Pfam PF00270 DEAD/DEAH box helicase 27 191 6.9E-47 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Patl_0588 f8bbd0fc57ac3d58a9f8b4d45dacbaac 459 SMART SM00487 22 219 5.5E-57 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_0588 f8bbd0fc57ac3d58a9f8b4d45dacbaac 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Patl_0588 f8bbd0fc57ac3d58a9f8b4d45dacbaac 459 SMART SM00490 255 336 5.2E-28 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_0588 f8bbd0fc57ac3d58a9f8b4d45dacbaac 459 Gene3D G3DSA:3.40.50.300 1 209 4.6E-73 T 11-10-2018 Patl_0588 f8bbd0fc57ac3d58a9f8b4d45dacbaac 459 SUPERFAMILY SSF52540 72 356 1.13E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0588 f8bbd0fc57ac3d58a9f8b4d45dacbaac 459 Pfam PF00271 Helicase conserved C-terminal domain 231 335 8.5E-27 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_0588 f8bbd0fc57ac3d58a9f8b4d45dacbaac 459 Gene3D G3DSA:3.40.50.300 212 388 4.2E-46 T 11-10-2018 Patl_0588 f8bbd0fc57ac3d58a9f8b4d45dacbaac 459 Gene3D G3DSA:3.30.70.330 389 459 1.5E-21 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Patl_1519 ffcf868da34c265b5973dfac0a766df7 398 SUPERFAMILY SSF53187 145 384 2.75E-44 T 11-10-2018 Patl_1519 ffcf868da34c265b5973dfac0a766df7 398 Pfam PF00246 Zinc carboxypeptidase 150 263 9.4E-19 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Patl_1519 ffcf868da34c265b5973dfac0a766df7 398 Gene3D G3DSA:3.40.630.10 146 389 5.4E-37 T 11-10-2018 Patl_1519 ffcf868da34c265b5973dfac0a766df7 398 SMART SM00631 147 383 6.3E-5 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Patl_2469 93a1e03f4bdca88a7c56af27919bf536 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 359 1.2E-165 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Patl_2469 93a1e03f4bdca88a7c56af27919bf536 361 Pfam PF00266 Aminotransferase class-V 4 349 6.0E-67 T 11-10-2018 IPR000192 Aminotransferase class V domain Patl_2469 93a1e03f4bdca88a7c56af27919bf536 361 Gene3D G3DSA:3.90.1150.10 258 361 3.4E-42 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_2469 93a1e03f4bdca88a7c56af27919bf536 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Patl_2469 93a1e03f4bdca88a7c56af27919bf536 361 PIRSF PIRSF000525 1 361 1.7E-158 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Patl_2469 93a1e03f4bdca88a7c56af27919bf536 361 SUPERFAMILY SSF53383 1 359 1.45E-125 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_2469 93a1e03f4bdca88a7c56af27919bf536 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 51.802 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Patl_2469 93a1e03f4bdca88a7c56af27919bf536 361 Gene3D G3DSA:3.40.640.10 17 257 2.1E-97 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_3079 c86306dec40aabc6f24a7bb3ae4f9cea 378 SUPERFAMILY SSF53383 2 377 6.34E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_3079 c86306dec40aabc6f24a7bb3ae4f9cea 378 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 373 6.2E-105 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Patl_3079 c86306dec40aabc6f24a7bb3ae4f9cea 378 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 377 5.0E-173 T 11-10-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase Patl_3079 c86306dec40aabc6f24a7bb3ae4f9cea 378 PIRSF PIRSF000390 1 378 9.2E-102 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Patl_3079 c86306dec40aabc6f24a7bb3ae4f9cea 378 Gene3D G3DSA:3.90.1150.10 257 376 3.5E-35 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_3079 c86306dec40aabc6f24a7bb3ae4f9cea 378 Gene3D G3DSA:3.40.640.10 1 256 1.2E-80 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_1637 650fbfae3e54367c79c5cf81ef51c872 691 SUPERFAMILY SSF51445 131 572 3.52E-117 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_1637 650fbfae3e54367c79c5cf81ef51c872 691 Gene3D G3DSA:2.60.40.1180 585 689 8.5E-18 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_1637 650fbfae3e54367c79c5cf81ef51c872 691 Gene3D G3DSA:2.60.40.10 1 132 2.9E-37 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_1637 650fbfae3e54367c79c5cf81ef51c872 691 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 16 103 1.6E-14 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Patl_1637 650fbfae3e54367c79c5cf81ef51c872 691 Pfam PF00128 Alpha amylase, catalytic domain 184 350 6.0E-13 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_1637 650fbfae3e54367c79c5cf81ef51c872 691 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 11 689 1.2E-258 T 11-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 Patl_1637 650fbfae3e54367c79c5cf81ef51c872 691 Gene3D G3DSA:3.20.20.80 133 578 9.1E-161 T 11-10-2018 Patl_1637 650fbfae3e54367c79c5cf81ef51c872 691 SUPERFAMILY SSF81296 10 134 8.68E-35 T 11-10-2018 IPR014756 Immunoglobulin E-set Patl_1637 650fbfae3e54367c79c5cf81ef51c872 691 SMART SM00642 154 565 1.4E-7 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_1637 650fbfae3e54367c79c5cf81ef51c872 691 SUPERFAMILY SSF51011 586 689 3.02E-21 T 11-10-2018 Patl_2164 e98111ef24fd016642350461f566f883 586 Gene3D G3DSA:2.60.40.1180 510 581 2.0E-7 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_2164 e98111ef24fd016642350461f566f883 586 Gene3D G3DSA:3.90.400.10 147 220 4.2E-156 T 11-10-2018 Patl_2164 e98111ef24fd016642350461f566f883 586 SUPERFAMILY SSF51445 58 537 3.68E-91 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_2164 e98111ef24fd016642350461f566f883 586 PIRSF PIRSF003059 10 582 7.8E-177 T 11-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related Patl_2164 e98111ef24fd016642350461f566f883 586 SUPERFAMILY SSF51011 512 580 3.17E-6 T 11-10-2018 Patl_2164 e98111ef24fd016642350461f566f883 586 Pfam PF00128 Alpha amylase, catalytic domain 96 350 1.1E-19 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_2164 e98111ef24fd016642350461f566f883 586 Gene3D G3DSA:3.20.20.80 65 472 4.2E-156 T 11-10-2018 Patl_2164 e98111ef24fd016642350461f566f883 586 SMART SM00642 47 410 2.7E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_1528 b6f7fc0472c0f6b3b5b034a333d2cf7f 483 Gene3D G3DSA:1.20.1480.50 171 257 9.2E-8 T 11-10-2018 Patl_1528 b6f7fc0472c0f6b3b5b034a333d2cf7f 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 2.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1528 b6f7fc0472c0f6b3b5b034a333d2cf7f 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 2.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1528 b6f7fc0472c0f6b3b5b034a333d2cf7f 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 2.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1528 b6f7fc0472c0f6b3b5b034a333d2cf7f 483 SMART SM00388 259 323 8.4E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1528 b6f7fc0472c0f6b3b5b034a333d2cf7f 483 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 321 6.6E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1528 b6f7fc0472c0f6b3b5b034a333d2cf7f 483 Gene3D G3DSA:1.10.287.130 258 322 3.3E-12 T 11-10-2018 Patl_1528 b6f7fc0472c0f6b3b5b034a333d2cf7f 483 SUPERFAMILY SSF158472 206 251 2.09E-5 T 11-10-2018 Patl_1528 b6f7fc0472c0f6b3b5b034a333d2cf7f 483 SUPERFAMILY SSF55874 312 477 1.83E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1528 b6f7fc0472c0f6b3b5b034a333d2cf7f 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 369 479 2.5E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1528 b6f7fc0472c0f6b3b5b034a333d2cf7f 483 Gene3D G3DSA:3.30.565.10 329 482 7.6E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1528 b6f7fc0472c0f6b3b5b034a333d2cf7f 483 SUPERFAMILY SSF47384 243 323 2.94E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_1528 b6f7fc0472c0f6b3b5b034a333d2cf7f 483 SMART SM00387 368 480 3.7E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1261 14e8bed79332076652fcfce2c15fd7f0 256 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 255 1.4E-27 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 Patl_1261 14e8bed79332076652fcfce2c15fd7f0 256 PIRSF PIRSF000456 1 256 5.2E-105 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Patl_1261 14e8bed79332076652fcfce2c15fd7f0 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 137 1.6E-9 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_1261 14e8bed79332076652fcfce2c15fd7f0 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 1 33 4.2E-8 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_1261 14e8bed79332076652fcfce2c15fd7f0 256 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 14 42 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Patl_1261 14e8bed79332076652fcfce2c15fd7f0 256 SUPERFAMILY SSF51161 2 256 7.07E-78 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Patl_1261 14e8bed79332076652fcfce2c15fd7f0 256 Gene3D G3DSA:2.160.10.10 1 186 2.8E-55 T 11-10-2018 Patl_1261 14e8bed79332076652fcfce2c15fd7f0 256 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 44.153 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Patl_1261 14e8bed79332076652fcfce2c15fd7f0 256 Gene3D G3DSA:1.20.1180.10 191 256 7.3E-25 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 Patl_1261 14e8bed79332076652fcfce2c15fd7f0 256 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 255 1.3E-103 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 Patl_3868 98ae6f9d9ba2e1958c73a4256b0f8f59 250 SUPERFAMILY SSF89550 4 243 2.09E-54 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Patl_3868 98ae6f9d9ba2e1958c73a4256b0f8f59 250 SMART SM00481 5 79 5.1E-6 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Patl_3868 98ae6f9d9ba2e1958c73a4256b0f8f59 250 Gene3D G3DSA:3.20.20.140 4 246 5.1E-58 T 11-10-2018 Patl_3395 82e5278099c316b34a0fc5c86a3e66cb 351 PIRSF PIRSF005508 1 351 6.2E-125 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Patl_3395 82e5278099c316b34a0fc5c86a3e66cb 351 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 1 343 5.4E-125 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Patl_3395 82e5278099c316b34a0fc5c86a3e66cb 351 Pfam PF01758 Sodium Bile acid symporter family 47 255 2.4E-44 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Patl_3395 82e5278099c316b34a0fc5c86a3e66cb 351 Gene3D G3DSA:1.20.1530.20 2 345 3.6E-28 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Patl_1827 0ab521fcb4c9d0b93f5f518d2a6adb75 911 Pfam PF00246 Zinc carboxypeptidase 77 260 2.6E-16 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Patl_1827 0ab521fcb4c9d0b93f5f518d2a6adb75 911 Gene3D G3DSA:3.40.630.10 68 392 7.2E-34 T 11-10-2018 Patl_1827 0ab521fcb4c9d0b93f5f518d2a6adb75 911 Gene3D G3DSA:3.40.50.880 648 899 5.1E-6 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_1827 0ab521fcb4c9d0b93f5f518d2a6adb75 911 SUPERFAMILY SSF52317 672 900 3.43E-8 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_1827 0ab521fcb4c9d0b93f5f518d2a6adb75 911 SMART SM00631 72 355 0.0035 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Patl_1827 0ab521fcb4c9d0b93f5f518d2a6adb75 911 SUPERFAMILY SSF53187 64 358 5.59E-49 T 11-10-2018 Patl_2397 97d4c6cb04a79f94ab3e8342f17d0160 88 Gene3D G3DSA:1.20.120.910 1 72 2.5E-23 T 11-10-2018 Patl_2397 97d4c6cb04a79f94ab3e8342f17d0160 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 69 1.1E-13 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Patl_2397 97d4c6cb04a79f94ab3e8342f17d0160 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Patl_2397 97d4c6cb04a79f94ab3e8342f17d0160 88 SUPERFAMILY SSF57716 38 71 1.37E-8 T 11-10-2018 Patl_2397 97d4c6cb04a79f94ab3e8342f17d0160 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 7.0E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Patl_2397 97d4c6cb04a79f94ab3e8342f17d0160 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 7.0E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria Patl_2397 97d4c6cb04a79f94ab3e8342f17d0160 88 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 12 68 2.2E-17 T 11-10-2018 IPR012783 Zinc finger, C4 DksA/TraR-type Patl_3980 819f15a2d9cc690efb80f2d1363f1021 382 Gene3D G3DSA:3.30.479.30 101 234 2.9E-20 T 11-10-2018 Patl_3980 819f15a2d9cc690efb80f2d1363f1021 382 PRINTS PR00721 Stomatin signature 126 147 1.9E-5 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Patl_3980 819f15a2d9cc690efb80f2d1363f1021 382 PRINTS PR00721 Stomatin signature 208 226 1.9E-5 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Patl_3980 819f15a2d9cc690efb80f2d1363f1021 382 PRINTS PR00721 Stomatin signature 79 101 1.9E-5 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Patl_3980 819f15a2d9cc690efb80f2d1363f1021 382 Pfam PF12221 Bacterial membrane protein N terminal 1 44 4.6E-13 T 11-10-2018 IPR020980 Menbrane protein HflK, N-terminal Patl_3980 819f15a2d9cc690efb80f2d1363f1021 382 Pfam PF01145 SPFH domain / Band 7 family 76 247 1.5E-28 T 11-10-2018 IPR001107 Band 7 domain Patl_3980 819f15a2d9cc690efb80f2d1363f1021 382 SUPERFAMILY SSF117892 105 237 5.23E-22 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily Patl_3980 819f15a2d9cc690efb80f2d1363f1021 382 SMART SM00244 72 232 4.8E-42 T 11-10-2018 IPR001107 Band 7 domain Patl_3980 819f15a2d9cc690efb80f2d1363f1021 382 TIGRFAM TIGR01933 hflK: HflK protein 74 334 2.2E-113 T 11-10-2018 IPR010201 HflK GO:0016021 Patl_2366 c13c74b54744e6e77173d0269b39dfa1 118 Gene3D G3DSA:3.10.180.10 2 118 1.4E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2366 c13c74b54744e6e77173d0269b39dfa1 118 SUPERFAMILY SSF54593 2 117 2.01E-22 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2366 c13c74b54744e6e77173d0269b39dfa1 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 111 3.1E-9 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Patl_3846 f94a46c662e45327643a69b0cb055b44 174 Gene3D G3DSA:3.90.79.10 1 160 3.6E-47 T 11-10-2018 Patl_3846 f94a46c662e45327643a69b0cb055b44 174 Pfam PF00293 NUDIX domain 7 145 1.0E-25 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Patl_3846 f94a46c662e45327643a69b0cb055b44 174 SUPERFAMILY SSF55811 7 159 5.01E-31 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Patl_3846 f94a46c662e45327643a69b0cb055b44 174 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.8E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Patl_3846 f94a46c662e45327643a69b0cb055b44 174 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.8E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Patl_3846 f94a46c662e45327643a69b0cb055b44 174 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.452 T 11-10-2018 IPR022927 RNA pyrophosphohydrolase RppH Patl_3846 f94a46c662e45327643a69b0cb055b44 174 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Patl_1576 1bcce7b639c3128f0e5cb327157df53d 381 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_1576 1bcce7b639c3128f0e5cb327157df53d 381 Gene3D G3DSA:3.40.50.300 4 224 9.6E-61 T 11-10-2018 Patl_1576 1bcce7b639c3128f0e5cb327157df53d 381 SMART SM00382 31 214 9.9E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1576 1bcce7b639c3128f0e5cb327157df53d 381 Gene3D G3DSA:2.40.50.140 286 318 2.7E-14 T 11-10-2018 Patl_1576 1bcce7b639c3128f0e5cb327157df53d 381 Gene3D G3DSA:2.40.50.940 225 285 2.7E-14 T 11-10-2018 Patl_1576 1bcce7b639c3128f0e5cb327157df53d 381 Pfam PF00005 ABC transporter 25 164 1.1E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1576 1bcce7b639c3128f0e5cb327157df53d 381 SUPERFAMILY SSF52540 5 246 4.67E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1576 1bcce7b639c3128f0e5cb327157df53d 381 SUPERFAMILY SSF50331 240 379 3.16E-9 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Patl_3181 bda380072ba3cec3c43d72e78fe842a2 87 Gene3D G3DSA:1.20.58.110 1 87 1.5E-31 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_3181 bda380072ba3cec3c43d72e78fe842a2 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 1.0E-22 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_3181 bda380072ba3cec3c43d72e78fe842a2 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 5.7E-30 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_3181 bda380072ba3cec3c43d72e78fe842a2 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 18.132 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_3181 bda380072ba3cec3c43d72e78fe842a2 87 SUPERFAMILY SSF46992 3 86 4.97E-32 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_3181 bda380072ba3cec3c43d72e78fe842a2 87 Pfam PF01649 Ribosomal protein S20 2 84 4.6E-29 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_4167 625fcd092f2af1955de1dab7bfa5917d 391 Pfam PF07075 Protein of unknown function (DUF1343) 49 390 7.1E-120 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 Patl_4167 625fcd092f2af1955de1dab7bfa5917d 391 PIRSF PIRSF016719 1 303 3.1E-96 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 Patl_4167 625fcd092f2af1955de1dab7bfa5917d 391 PIRSF PIRSF016719 318 391 2.6E-8 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 Patl_4167 625fcd092f2af1955de1dab7bfa5917d 391 Gene3D G3DSA:3.40.50.12170 26 391 4.6E-141 T 11-10-2018 Patl_2547 8d81f78c548a3567e2610cfc52d299b7 924 SUPERFAMILY SSF56935 29 921 9.33E-91 T 11-10-2018 Patl_2547 8d81f78c548a3567e2610cfc52d299b7 924 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 36 922 2.1E-190 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor Patl_2547 8d81f78c548a3567e2610cfc52d299b7 924 Gene3D G3DSA:2.170.130.10 27 170 1.4E-17 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_2547 8d81f78c548a3567e2610cfc52d299b7 924 Pfam PF00593 TonB dependent receptor 439 920 5.2E-30 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_2547 8d81f78c548a3567e2610cfc52d299b7 924 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 161 3.1E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_4177 e8e31755296ea044d39c4ebfb5cb688d 347 SMART SM00448 33 145 5.7E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4177 e8e31755296ea044d39c4ebfb5cb688d 347 Pfam PF00072 Response regulator receiver domain 36 145 6.7E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4177 e8e31755296ea044d39c4ebfb5cb688d 347 SMART SM00267 151 331 1.7E-54 T 11-10-2018 IPR000160 GGDEF domain Patl_4177 e8e31755296ea044d39c4ebfb5cb688d 347 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 158 330 6.4E-47 T 11-10-2018 IPR000160 GGDEF domain Patl_4177 e8e31755296ea044d39c4ebfb5cb688d 347 Gene3D G3DSA:3.30.70.270 158 333 1.6E-49 T 11-10-2018 Patl_4177 e8e31755296ea044d39c4ebfb5cb688d 347 Pfam PF00990 Diguanylate cyclase, GGDEF domain 163 327 1.6E-43 T 11-10-2018 IPR000160 GGDEF domain Patl_4177 e8e31755296ea044d39c4ebfb5cb688d 347 SUPERFAMILY SSF55073 167 329 9.02E-44 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_4177 e8e31755296ea044d39c4ebfb5cb688d 347 Gene3D G3DSA:3.40.50.2300 21 157 2.7E-33 T 11-10-2018 Patl_4177 e8e31755296ea044d39c4ebfb5cb688d 347 SUPERFAMILY SSF52172 29 162 1.14E-34 T 11-10-2018 IPR011006 CheY-like superfamily Patl_0220 0ef095496551425092ee9e80bab0eda0 234 Gene3D G3DSA:2.60.40.2130 17 168 2.8E-13 T 11-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 Patl_0220 0ef095496551425092ee9e80bab0eda0 234 Pfam PF06468 Spondin_N 37 155 3.1E-12 T 11-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 Patl_3472 802aad973d1a4c68e5259244cb62112b 396 SUPERFAMILY SSF63380 150 258 2.55E-26 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Patl_3472 802aad973d1a4c68e5259244cb62112b 396 Pfam PF00175 Oxidoreductase NAD-binding domain 268 373 1.4E-16 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Patl_3472 802aad973d1a4c68e5259244cb62112b 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 252 261 6.7E-8 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Patl_3472 802aad973d1a4c68e5259244cb62112b 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 6.7E-8 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Patl_3472 802aad973d1a4c68e5259244cb62112b 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 6.7E-8 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Patl_3472 802aad973d1a4c68e5259244cb62112b 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 267 286 6.7E-8 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Patl_3472 802aad973d1a4c68e5259244cb62112b 396 Gene3D G3DSA:3.40.50.80 260 395 3.1E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_3472 802aad973d1a4c68e5259244cb62112b 396 Gene3D G3DSA:1.10.490.10 1 144 3.6E-54 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Patl_3472 802aad973d1a4c68e5259244cb62112b 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 52.075 T 11-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 Patl_3472 802aad973d1a4c68e5259244cb62112b 396 Pfam PF00042 Globin 7 102 3.6E-11 T 11-10-2018 IPR000971 Globin GO:0020037 Patl_3472 802aad973d1a4c68e5259244cb62112b 396 SUPERFAMILY SSF46458 1 141 1.31E-40 T 11-10-2018 IPR009050 Globin-like superfamily Patl_3472 802aad973d1a4c68e5259244cb62112b 396 Pfam PF00970 Oxidoreductase FAD-binding domain 158 257 5.8E-7 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Patl_3472 802aad973d1a4c68e5259244cb62112b 396 Gene3D G3DSA:2.40.30.10 151 258 6.4E-33 T 11-10-2018 Patl_3472 802aad973d1a4c68e5259244cb62112b 396 SUPERFAMILY SSF52343 259 393 6.68E-34 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_1662 db9ea27b11da14f3343c4d8c9a55b471 318 Gene3D G3DSA:3.40.50.300 17 183 9.2E-46 T 11-10-2018 Patl_1662 db9ea27b11da14f3343c4d8c9a55b471 318 PIRSF PIRSF002849 2 318 2.1E-126 T 11-10-2018 Patl_1662 db9ea27b11da14f3343c4d8c9a55b471 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 6.7E-63 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Patl_1662 db9ea27b11da14f3343c4d8c9a55b471 318 SUPERFAMILY SSF52540 6 291 1.5E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1662 db9ea27b11da14f3343c4d8c9a55b471 318 Gene3D G3DSA:1.10.8.300 200 315 1.2E-36 T 11-10-2018 Patl_2699 5a57eb70d0bb0b4851eef39cb2d985b9 232 Pfam PF13545 Crp-like helix-turn-helix domain 158 228 2.4E-20 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Patl_2699 5a57eb70d0bb0b4851eef39cb2d985b9 232 ProSitePatterns PS00042 Crp-type HTH domain signature. 182 205 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 Patl_2699 5a57eb70d0bb0b4851eef39cb2d985b9 232 SMART SM00419 174 223 1.3E-15 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Patl_2699 5a57eb70d0bb0b4851eef39cb2d985b9 232 SMART SM00100 28 138 1.6E-4 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Patl_2699 5a57eb70d0bb0b4851eef39cb2d985b9 232 SUPERFAMILY SSF51206 30 152 8.77E-23 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like Patl_2699 5a57eb70d0bb0b4851eef39cb2d985b9 232 Pfam PF00027 Cyclic nucleotide-binding domain 42 126 4.0E-14 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Patl_2699 5a57eb70d0bb0b4851eef39cb2d985b9 232 Gene3D G3DSA:2.60.120.10 38 154 2.6E-23 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_2699 5a57eb70d0bb0b4851eef39cb2d985b9 232 SUPERFAMILY SSF46785 155 231 4.97E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2699 5a57eb70d0bb0b4851eef39cb2d985b9 232 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 196 211 1.4E-10 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Patl_2699 5a57eb70d0bb0b4851eef39cb2d985b9 232 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 180 196 1.4E-10 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Patl_2699 5a57eb70d0bb0b4851eef39cb2d985b9 232 Gene3D G3DSA:1.10.10.10 155 232 1.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2263 58c0fbe0c2ea512138d9747f5b5c0ec4 544 Pfam PF00999 Sodium/hydrogen exchanger family 9 375 8.8E-51 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Patl_2263 58c0fbe0c2ea512138d9747f5b5c0ec4 544 SUPERFAMILY SSF51735 400 529 4.43E-20 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2263 58c0fbe0c2ea512138d9747f5b5c0ec4 544 Gene3D G3DSA:1.20.1530.20 2 382 4.8E-73 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Patl_2263 58c0fbe0c2ea512138d9747f5b5c0ec4 544 Gene3D G3DSA:3.40.50.720 398 542 5.5E-21 T 11-10-2018 Patl_2263 58c0fbe0c2ea512138d9747f5b5c0ec4 544 Pfam PF02254 TrkA-N domain 404 512 4.9E-16 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Patl_3227 aeeaf512b342bda13f4cc5960a69d515 217 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3227 aeeaf512b342bda13f4cc5960a69d515 217 Pfam PF07963 Prokaryotic N-terminal methylation motif 17 37 2.6E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3227 aeeaf512b342bda13f4cc5960a69d515 217 SUPERFAMILY SSF54523 19 72 1.65E-6 T 11-10-2018 Patl_3227 aeeaf512b342bda13f4cc5960a69d515 217 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 37 3.1E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_2418 fd9c152af07081c1da9007c9e39de2d7 570 SUPERFAMILY SSF81606 5 234 6.54E-39 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Patl_2418 fd9c152af07081c1da9007c9e39de2d7 570 Gene3D G3DSA:3.60.40.10 2 236 2.3E-37 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Patl_2418 fd9c152af07081c1da9007c9e39de2d7 570 Gene3D G3DSA:1.10.510.10 259 547 2.9E-50 T 11-10-2018 Patl_2418 fd9c152af07081c1da9007c9e39de2d7 570 SMART SM00332 3 232 2.2E-7 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Patl_2418 fd9c152af07081c1da9007c9e39de2d7 570 SUPERFAMILY SSF56112 248 527 1.46E-57 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Patl_2418 fd9c152af07081c1da9007c9e39de2d7 570 SMART SM00331 19 234 1.5E-10 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Patl_2418 fd9c152af07081c1da9007c9e39de2d7 570 Pfam PF13672 Protein phosphatase 2C 14 210 1.3E-8 T 11-10-2018 Patl_2418 fd9c152af07081c1da9007c9e39de2d7 570 SMART SM00220 267 528 1.1E-21 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Patl_2418 fd9c152af07081c1da9007c9e39de2d7 570 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 386 398 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Patl_2418 fd9c152af07081c1da9007c9e39de2d7 570 Pfam PF00069 Protein kinase domain 268 475 3.9E-38 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Patl_3092 12a44144c25c0fd7a1fbc704b6a3d773 269 SUPERFAMILY SSF53955 111 157 3.75E-5 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Patl_3092 12a44144c25c0fd7a1fbc704b6a3d773 269 Gene3D G3DSA:2.10.70.40 154 205 3.9E-45 T 11-10-2018 Patl_3092 12a44144c25c0fd7a1fbc704b6a3d773 269 SMART SM00047 110 268 1.2E-30 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Patl_3092 12a44144c25c0fd7a1fbc704b6a3d773 269 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 126 261 8.9E-21 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Patl_3092 12a44144c25c0fd7a1fbc704b6a3d773 269 Gene3D G3DSA:1.10.530.10 120 258 3.9E-45 T 11-10-2018 Patl_3092 12a44144c25c0fd7a1fbc704b6a3d773 269 PRINTS PR01002 Flagellar protein FlgJ signature 11 31 3.4E-28 T 11-10-2018 Patl_3092 12a44144c25c0fd7a1fbc704b6a3d773 269 PRINTS PR01002 Flagellar protein FlgJ signature 32 54 3.4E-28 T 11-10-2018 Patl_3092 12a44144c25c0fd7a1fbc704b6a3d773 269 PRINTS PR01002 Flagellar protein FlgJ signature 202 223 3.4E-28 T 11-10-2018 Patl_3092 12a44144c25c0fd7a1fbc704b6a3d773 269 PRINTS PR01002 Flagellar protein FlgJ signature 245 263 3.4E-28 T 11-10-2018 Patl_3092 12a44144c25c0fd7a1fbc704b6a3d773 269 PRINTS PR01002 Flagellar protein FlgJ signature 139 157 3.4E-28 T 11-10-2018 Patl_3092 12a44144c25c0fd7a1fbc704b6a3d773 269 PRINTS PR01002 Flagellar protein FlgJ signature 180 201 3.4E-28 T 11-10-2018 Patl_3092 12a44144c25c0fd7a1fbc704b6a3d773 269 Pfam PF10135 Rod binding protein 4 55 2.5E-18 T 11-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal Patl_3092 12a44144c25c0fd7a1fbc704b6a3d773 269 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 1 261 9.6E-78 T 11-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 Patl_0764 ba25f6f0e8df0e6637655bbf9fa57876 138 SUPERFAMILY SSF54975 3 132 4.25E-39 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Patl_0764 ba25f6f0e8df0e6637655bbf9fa57876 138 SMART SM01034 3 95 1.8E-45 T 11-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 Patl_0764 ba25f6f0e8df0e6637655bbf9fa57876 138 Gene3D G3DSA:3.30.70.100 1 134 3.2E-36 T 11-10-2018 Patl_0764 ba25f6f0e8df0e6637655bbf9fa57876 138 Pfam PF04940 Sensors of blue-light using FAD 3 94 1.4E-29 T 11-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 Patl_3944 70a9654f494ead0a3bd7e1f9a3f9fde2 485 SMART SM00963 177 257 3.9E-25 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Patl_3944 70a9654f494ead0a3bd7e1f9a3f9fde2 485 Pfam PF02881 SRP54-type protein, helical bundle domain 188 253 1.8E-12 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Patl_3944 70a9654f494ead0a3bd7e1f9a3f9fde2 485 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 446 459 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Patl_3944 70a9654f494ead0a3bd7e1f9a3f9fde2 485 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 201 472 1.9E-114 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Patl_3944 70a9654f494ead0a3bd7e1f9a3f9fde2 485 SMART SM00962 272 473 1.5E-123 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Patl_3944 70a9654f494ead0a3bd7e1f9a3f9fde2 485 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 200 473 63.153 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Patl_3944 70a9654f494ead0a3bd7e1f9a3f9fde2 485 SUPERFAMILY SSF47364 171 250 7.98E-22 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Patl_3944 70a9654f494ead0a3bd7e1f9a3f9fde2 485 SUPERFAMILY SSF52540 270 472 1.11E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3944 70a9654f494ead0a3bd7e1f9a3f9fde2 485 SMART SM00382 271 451 6.7E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3944 70a9654f494ead0a3bd7e1f9a3f9fde2 485 Pfam PF00448 SRP54-type protein, GTPase domain 272 472 3.9E-78 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Patl_3944 70a9654f494ead0a3bd7e1f9a3f9fde2 485 Gene3D G3DSA:3.40.50.300 268 461 6.9E-117 T 11-10-2018 Patl_3944 70a9654f494ead0a3bd7e1f9a3f9fde2 485 Gene3D G3DSA:1.20.120.140 174 471 6.9E-117 T 11-10-2018 Patl_1888 3b8b5ae22536d244a187b1c9209c2df6 464 Gene3D G3DSA:1.20.120.640 306 463 3.3E-46 T 11-10-2018 Patl_1888 3b8b5ae22536d244a187b1c9209c2df6 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.7E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Patl_1888 3b8b5ae22536d244a187b1c9209c2df6 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.7E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Patl_1888 3b8b5ae22536d244a187b1c9209c2df6 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.7E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Patl_1888 3b8b5ae22536d244a187b1c9209c2df6 464 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.7E-30 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Patl_1888 3b8b5ae22536d244a187b1c9209c2df6 464 Pfam PF09190 DALR domain 342 406 4.8E-21 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Patl_1888 3b8b5ae22536d244a187b1c9209c2df6 464 SUPERFAMILY SSF47323 316 463 4.45E-36 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1888 3b8b5ae22536d244a187b1c9209c2df6 464 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 3.1E-137 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Patl_1888 3b8b5ae22536d244a187b1c9209c2df6 464 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 464 39.124 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Patl_1888 3b8b5ae22536d244a187b1c9209c2df6 464 SMART SM00840 342 406 8.5E-25 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Patl_1888 3b8b5ae22536d244a187b1c9209c2df6 464 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 463 1.8E-184 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Patl_1888 3b8b5ae22536d244a187b1c9209c2df6 464 Gene3D G3DSA:3.40.50.620 1 305 3.9E-138 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_1888 3b8b5ae22536d244a187b1c9209c2df6 464 SUPERFAMILY SSF52374 2 313 7.78E-103 T 11-10-2018 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 Gene3D G3DSA:2.30.30.40 605 735 1.8E-33 T 11-10-2018 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 Pfam PF01584 CheW-like domain 611 741 4.3E-23 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 521 4.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 583 4.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 602 4.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 559 4.4E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 SMART SM00073 6 103 2.0E-23 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 SMART SM00260 597 739 1.7E-31 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 SMART SM00387 462 605 1.1E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 Gene3D G3DSA:2.40.50.180 628 694 1.8E-33 T 11-10-2018 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 Gene3D G3DSA:3.30.565.10 418 604 9.0E-57 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 SUPERFAMILY SSF47384 358 418 1.02E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 Gene3D G3DSA:1.20.120.160 3 140 7.3E-37 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 Pfam PF01627 Hpt domain 8 99 5.4E-19 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 Gene3D G3DSA:1.10.287.560 357 417 1.2E-19 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 SMART SM01231 357 417 2.1E-18 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 SUPERFAMILY SSF47226 6 126 4.45E-31 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 358 417 4.4E-14 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 SUPERFAMILY SSF50341 604 739 1.57E-28 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 604 3.8E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3027 91d89ce31ea084591768ae6e454d0d9a 754 SUPERFAMILY SSF55874 420 603 4.98E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0423 aec6519edf4ee223482100cd5b75b001 799 SMART SM00387 682 795 5.1E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0423 aec6519edf4ee223482100cd5b75b001 799 PRINTS PR01033 Phytochrome signature 485 503 9.9E-16 T 11-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Patl_0423 aec6519edf4ee223482100cd5b75b001 799 PRINTS PR01033 Phytochrome signature 265 286 9.9E-16 T 11-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Patl_0423 aec6519edf4ee223482100cd5b75b001 799 PRINTS PR01033 Phytochrome signature 183 202 9.9E-16 T 11-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Patl_0423 aec6519edf4ee223482100cd5b75b001 799 PRINTS PR01033 Phytochrome signature 450 469 9.9E-16 T 11-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 Patl_0423 aec6519edf4ee223482100cd5b75b001 799 SUPERFAMILY SSF47384 559 640 5.3E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_0423 aec6519edf4ee223482100cd5b75b001 799 SMART SM00388 574 641 1.2E-5 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_0423 aec6519edf4ee223482100cd5b75b001 799 Pfam PF00360 Phytochrome region 344 526 4.4E-55 T 11-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 Patl_0423 aec6519edf4ee223482100cd5b75b001 799 SUPERFAMILY SSF55781 348 526 9.12E-44 T 11-10-2018 Patl_0423 aec6519edf4ee223482100cd5b75b001 799 Gene3D G3DSA:3.30.450.40 11 498 3.3E-155 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_0423 aec6519edf4ee223482100cd5b75b001 799 Gene3D G3DSA:3.30.450.20 16 268 3.3E-155 T 11-10-2018 Patl_0423 aec6519edf4ee223482100cd5b75b001 799 SUPERFAMILY SSF55785 5 142 7.53E-24 T 11-10-2018 IPR035965 PAS domain superfamily Patl_0423 aec6519edf4ee223482100cd5b75b001 799 Pfam PF08446 PAS fold 12 140 2.0E-11 T 11-10-2018 IPR013654 PAS fold-2 GO:0006355 Patl_0423 aec6519edf4ee223482100cd5b75b001 799 SUPERFAMILY SSF55781 157 327 6.11E-54 T 11-10-2018 Patl_0423 aec6519edf4ee223482100cd5b75b001 799 SMART SM00065 168 340 2.2E-4 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_0423 aec6519edf4ee223482100cd5b75b001 799 Gene3D G3DSA:3.30.565.10 646 798 4.2E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0423 aec6519edf4ee223482100cd5b75b001 799 Gene3D G3DSA:1.10.287.130 536 639 2.7E-13 T 11-10-2018 Patl_0423 aec6519edf4ee223482100cd5b75b001 799 Gene3D G3DSA:3.30.450.270 336 516 3.3E-155 T 11-10-2018 Patl_0423 aec6519edf4ee223482100cd5b75b001 799 Pfam PF01590 GAF domain 168 317 1.6E-17 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_0423 aec6519edf4ee223482100cd5b75b001 799 SUPERFAMILY SSF55874 632 793 2.36E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0423 aec6519edf4ee223482100cd5b75b001 799 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 682 793 1.7E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0647 c3991287546239552beeded1e041e2ed 389 Hamap MF_00246 Galactokinase [galK]. 30 386 42.522 T 11-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Patl_0647 c3991287546239552beeded1e041e2ed 389 Gene3D G3DSA:3.30.70.890 207 359 1.5E-127 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Patl_0647 c3991287546239552beeded1e041e2ed 389 SUPERFAMILY SSF54211 7 207 1.37E-63 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_0647 c3991287546239552beeded1e041e2ed 389 Gene3D G3DSA:3.30.230.10 27 206 1.5E-127 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Patl_0647 c3991287546239552beeded1e041e2ed 389 PIRSF PIRSF000530 1 389 2.4E-118 T 11-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Patl_0647 c3991287546239552beeded1e041e2ed 389 Pfam PF10509 Galactokinase galactose-binding signature 18 63 7.2E-21 T 11-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Patl_0647 c3991287546239552beeded1e041e2ed 389 ProSitePatterns PS00106 Galactokinase signature. 32 43 - T 11-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Patl_0647 c3991287546239552beeded1e041e2ed 389 PRINTS PR00473 Galactokinase signature 32 50 7.3E-29 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Patl_0647 c3991287546239552beeded1e041e2ed 389 PRINTS PR00473 Galactokinase signature 268 282 7.3E-29 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Patl_0647 c3991287546239552beeded1e041e2ed 389 PRINTS PR00473 Galactokinase signature 97 108 7.3E-29 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Patl_0647 c3991287546239552beeded1e041e2ed 389 PRINTS PR00473 Galactokinase signature 117 135 7.3E-29 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Patl_0647 c3991287546239552beeded1e041e2ed 389 SUPERFAMILY SSF55060 210 386 3.2E-48 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Patl_0647 c3991287546239552beeded1e041e2ed 389 Pfam PF08544 GHMP kinases C terminal 284 352 4.0E-8 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain Patl_0647 c3991287546239552beeded1e041e2ed 389 TIGRFAM TIGR00131 gal_kin: galactokinase 12 387 9.8E-141 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 Patl_0647 c3991287546239552beeded1e041e2ed 389 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 126 137 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 Patl_0647 c3991287546239552beeded1e041e2ed 389 Pfam PF00288 GHMP kinases N terminal domain 119 186 2.9E-13 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Patl_0647 c3991287546239552beeded1e041e2ed 389 PRINTS PR00959 Mevalonate kinase family signature 167 186 5.6E-45 T 11-10-2018 Patl_0647 c3991287546239552beeded1e041e2ed 389 PRINTS PR00959 Mevalonate kinase family signature 30 54 5.6E-45 T 11-10-2018 Patl_0647 c3991287546239552beeded1e041e2ed 389 PRINTS PR00959 Mevalonate kinase family signature 333 350 5.6E-45 T 11-10-2018 Patl_0647 c3991287546239552beeded1e041e2ed 389 PRINTS PR00959 Mevalonate kinase family signature 124 146 5.6E-45 T 11-10-2018 Patl_3532 2435948175d9693765d3d54644b0f89b 244 Gene3D G3DSA:1.10.10.10 8 73 1.2E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3532 2435948175d9693765d3d54644b0f89b 244 SUPERFAMILY SSF46785 5 77 7.2E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3532 2435948175d9693765d3d54644b0f89b 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 9.6E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_3532 2435948175d9693765d3d54644b0f89b 244 Gene3D G3DSA:1.20.120.530 100 240 1.4E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_3532 2435948175d9693765d3d54644b0f89b 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.4E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_3532 2435948175d9693765d3d54644b0f89b 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.4E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_3532 2435948175d9693765d3d54644b0f89b 244 SUPERFAMILY SSF48008 101 232 1.15E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_3532 2435948175d9693765d3d54644b0f89b 244 Pfam PF07729 FCD domain 102 222 2.9E-23 T 11-10-2018 IPR011711 GntR, C-terminal Patl_3532 2435948175d9693765d3d54644b0f89b 244 SMART SM00345 14 73 9.9E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_3532 2435948175d9693765d3d54644b0f89b 244 SMART SM00895 102 224 6.4E-19 T 11-10-2018 IPR011711 GntR, C-terminal Patl_2794 907383119bbdbfe882a831bd49b01416 236 SMART SM00345 12 71 5.8E-24 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2794 907383119bbdbfe882a831bd49b01416 236 SUPERFAMILY SSF46785 11 75 5.93E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2794 907383119bbdbfe882a831bd49b01416 236 Pfam PF07840 FadR C-terminal domain 72 234 1.3E-69 T 11-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 Patl_2794 907383119bbdbfe882a831bd49b01416 236 SUPERFAMILY SSF48008 79 230 1.16E-55 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_2794 907383119bbdbfe882a831bd49b01416 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 6.1E-21 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2794 907383119bbdbfe882a831bd49b01416 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2794 907383119bbdbfe882a831bd49b01416 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2794 907383119bbdbfe882a831bd49b01416 236 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 236 151.731 T 11-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 Patl_2794 907383119bbdbfe882a831bd49b01416 236 Gene3D G3DSA:1.20.120.530 80 235 2.4E-38 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_2794 907383119bbdbfe882a831bd49b01416 236 Gene3D G3DSA:1.10.10.10 1 79 2.4E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2794 907383119bbdbfe882a831bd49b01416 236 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 5.8E-113 T 11-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 Patl_4221 3ef9e57d88e36f4e1375145309cd2da1 421 Gene3D G3DSA:3.40.50.300 229 411 3.6E-48 T 11-10-2018 Patl_4221 3ef9e57d88e36f4e1375145309cd2da1 421 Pfam PF00271 Helicase conserved C-terminal domain 239 348 1.0E-30 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_4221 3ef9e57d88e36f4e1375145309cd2da1 421 SMART SM00490 267 348 2.7E-33 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_4221 3ef9e57d88e36f4e1375145309cd2da1 421 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 386 50.488 T 11-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 Patl_4221 3ef9e57d88e36f4e1375145309cd2da1 421 SMART SM00487 28 231 9.4E-51 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_4221 3ef9e57d88e36f4e1375145309cd2da1 421 SUPERFAMILY SSF52540 81 359 2.01E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4221 3ef9e57d88e36f4e1375145309cd2da1 421 Pfam PF00270 DEAD/DEAH box helicase 33 204 3.6E-44 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Patl_4221 3ef9e57d88e36f4e1375145309cd2da1 421 Gene3D G3DSA:3.40.50.300 2 219 1.3E-69 T 11-10-2018 Patl_4221 3ef9e57d88e36f4e1375145309cd2da1 421 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 160 168 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Patl_0890 22db1797211717eabc712fe7ca1edec8 646 SUPERFAMILY SSF69318 75 302 1.83E-28 T 11-10-2018 Patl_0890 22db1797211717eabc712fe7ca1edec8 646 SUPERFAMILY SSF69318 413 552 6.28E-14 T 11-10-2018 Patl_0890 22db1797211717eabc712fe7ca1edec8 646 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 80 137 1.2E-6 T 11-10-2018 Patl_0890 22db1797211717eabc712fe7ca1edec8 646 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 486 535 2.4E-6 T 11-10-2018 Patl_0890 22db1797211717eabc712fe7ca1edec8 646 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 239 299 5.1E-7 T 11-10-2018 Patl_0890 22db1797211717eabc712fe7ca1edec8 646 Pfam PF07593 ASPIC and UnbV 577 640 1.6E-8 T 11-10-2018 IPR011519 ASPIC/UnbV Patl_0897 be5526ccc5626cbd74dff74f07a99c91 387 SUPERFAMILY SSF54826 1 131 1.32E-31 T 11-10-2018 Patl_0897 be5526ccc5626cbd74dff74f07a99c91 387 Pfam PF13378 Enolase C-terminal domain-like 159 376 2.7E-62 T 11-10-2018 IPR029065 Enolase C-terminal domain-like Patl_0897 be5526ccc5626cbd74dff74f07a99c91 387 SUPERFAMILY SSF51604 114 385 2.49E-73 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Patl_0897 be5526ccc5626cbd74dff74f07a99c91 387 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 31 126 5.7E-17 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Patl_0897 be5526ccc5626cbd74dff74f07a99c91 387 Gene3D G3DSA:3.20.20.120 119 376 7.6E-122 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Patl_0897 be5526ccc5626cbd74dff74f07a99c91 387 SMART SM00922 149 245 2.1E-24 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Patl_0897 be5526ccc5626cbd74dff74f07a99c91 387 Gene3D G3DSA:3.30.390.10 3 380 7.6E-122 T 11-10-2018 IPR029017 Enolase-like, N-terminal Patl_0556 8c3c18637658a871ae23628b6bc0b713 85 Pfam PF01722 BolA-like protein 20 73 1.9E-13 T 11-10-2018 IPR002634 BolA protein Patl_0556 8c3c18637658a871ae23628b6bc0b713 85 PIRSF PIRSF003113 1 85 2.0E-21 T 11-10-2018 IPR002634 BolA protein Patl_0556 8c3c18637658a871ae23628b6bc0b713 85 Gene3D G3DSA:3.30.300.90 1 84 9.5E-30 T 11-10-2018 Patl_0556 8c3c18637658a871ae23628b6bc0b713 85 SUPERFAMILY SSF82657 2 79 2.22E-26 T 11-10-2018 IPR036065 BolA-like superfamily Patl_4118 fa00b1ba67d51e21e4ffd53a18fd213e 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 267 2.6E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Patl_4118 fa00b1ba67d51e21e4ffd53a18fd213e 276 Gene3D G3DSA:1.10.3720.10 4 268 2.3E-52 T 11-10-2018 IPR035906 MetI-like superfamily Patl_4118 fa00b1ba67d51e21e4ffd53a18fd213e 276 SUPERFAMILY SSF161098 9 276 2.34E-62 T 11-10-2018 IPR035906 MetI-like superfamily Patl_3897 0a540483351266b7684da86396efbb78 414 Pfam PF03466 LysR substrate binding domain 201 407 1.2E-30 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_3897 0a540483351266b7684da86396efbb78 414 SUPERFAMILY SSF46785 12 91 6.28E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3897 0a540483351266b7684da86396efbb78 414 SUPERFAMILY SSF53850 202 408 9.87E-35 T 11-10-2018 Patl_3897 0a540483351266b7684da86396efbb78 414 Gene3D G3DSA:3.40.190.10 278 380 1.1E-47 T 11-10-2018 Patl_3897 0a540483351266b7684da86396efbb78 414 SUPERFAMILY SSF46785 113 222 1.36E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3897 0a540483351266b7684da86396efbb78 414 Gene3D G3DSA:3.40.190.10 205 398 1.1E-47 T 11-10-2018 Patl_3897 0a540483351266b7684da86396efbb78 414 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 116 172 3.1E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3897 0a540483351266b7684da86396efbb78 414 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 5.5E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3897 0a540483351266b7684da86396efbb78 414 Gene3D G3DSA:1.10.10.10 12 98 9.9E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3897 0a540483351266b7684da86396efbb78 414 Gene3D G3DSA:1.10.10.10 113 200 2.8E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3897 0a540483351266b7684da86396efbb78 414 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 2.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3897 0a540483351266b7684da86396efbb78 414 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 2.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3897 0a540483351266b7684da86396efbb78 414 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 2.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0307 cf6f1d9953bd7409292cd4ec669c2b4d 410 Pfam PF12704 MacB-like periplasmic core domain 18 203 2.4E-10 T 11-10-2018 IPR025857 MacB-like periplasmic core domain Patl_0307 cf6f1d9953bd7409292cd4ec669c2b4d 410 Pfam PF02687 FtsX-like permease family 310 402 1.8E-6 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Patl_0978 7558d4cad07add256ea75d278099cdb5 458 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 8.3E-68 T 11-10-2018 Patl_0978 7558d4cad07add256ea75d278099cdb5 458 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 8.3E-68 T 11-10-2018 Patl_0978 7558d4cad07add256ea75d278099cdb5 458 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 8.3E-68 T 11-10-2018 Patl_0978 7558d4cad07add256ea75d278099cdb5 458 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 8.3E-68 T 11-10-2018 Patl_0978 7558d4cad07add256ea75d278099cdb5 458 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 8.3E-68 T 11-10-2018 Patl_0978 7558d4cad07add256ea75d278099cdb5 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 8.3E-68 T 11-10-2018 Patl_0978 7558d4cad07add256ea75d278099cdb5 458 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.04 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Patl_0978 7558d4cad07add256ea75d278099cdb5 458 Pfam PF00206 Lyase 6 301 1.6E-85 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal Patl_0978 7558d4cad07add256ea75d278099cdb5 458 Gene3D G3DSA:1.10.275.10 25 230 7.1E-176 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal Patl_0978 7558d4cad07add256ea75d278099cdb5 458 Gene3D G3DSA:1.20.200.10 120 446 7.1E-176 T 11-10-2018 Patl_0978 7558d4cad07add256ea75d278099cdb5 458 Pfam PF14698 Argininosuccinate lyase C-terminal 364 432 3.2E-22 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Patl_0978 7558d4cad07add256ea75d278099cdb5 458 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Patl_0978 7558d4cad07add256ea75d278099cdb5 458 SUPERFAMILY SSF48557 3 454 1.3E-140 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 Patl_0978 7558d4cad07add256ea75d278099cdb5 458 Gene3D G3DSA:1.10.40.30 361 433 7.1E-176 T 11-10-2018 Patl_0978 7558d4cad07add256ea75d278099cdb5 458 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 4.6E-188 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Patl_0978 7558d4cad07add256ea75d278099cdb5 458 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 1.9E-26 T 11-10-2018 IPR000362 Fumarate lyase family Patl_0978 7558d4cad07add256ea75d278099cdb5 458 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 1.9E-26 T 11-10-2018 IPR000362 Fumarate lyase family Patl_0978 7558d4cad07add256ea75d278099cdb5 458 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.9E-26 T 11-10-2018 IPR000362 Fumarate lyase family Patl_0978 7558d4cad07add256ea75d278099cdb5 458 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 1.9E-26 T 11-10-2018 IPR000362 Fumarate lyase family Patl_1624 e6f0965513bbb8ef604af25e1e174f3f 324 Gene3D G3DSA:3.40.190.10 167 267 6.7E-101 T 11-10-2018 Patl_1624 e6f0965513bbb8ef604af25e1e174f3f 324 Gene3D G3DSA:3.40.190.10 92 303 6.7E-101 T 11-10-2018 Patl_1624 e6f0965513bbb8ef604af25e1e174f3f 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1624 e6f0965513bbb8ef604af25e1e174f3f 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1624 e6f0965513bbb8ef604af25e1e174f3f 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1624 e6f0965513bbb8ef604af25e1e174f3f 324 Gene3D G3DSA:1.10.10.10 1 86 2.4E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1624 e6f0965513bbb8ef604af25e1e174f3f 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.5E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1624 e6f0965513bbb8ef604af25e1e174f3f 324 Pfam PF03466 LysR substrate binding domain 91 292 2.4E-40 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_1624 e6f0965513bbb8ef604af25e1e174f3f 324 SUPERFAMILY SSF46785 1 85 1.79E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1624 e6f0965513bbb8ef604af25e1e174f3f 324 SUPERFAMILY SSF53850 92 321 3.69E-43 T 11-10-2018 Patl_3906 daab2038e693e1f5b22b4c43c1ac7040 309 Pfam PF12706 Beta-lactamase superfamily domain 62 278 4.5E-18 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_3906 daab2038e693e1f5b22b4c43c1ac7040 309 Gene3D G3DSA:3.60.15.10 32 309 3.9E-61 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_3906 daab2038e693e1f5b22b4c43c1ac7040 309 SUPERFAMILY SSF56281 33 307 1.24E-51 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_3906 daab2038e693e1f5b22b4c43c1ac7040 309 SMART SM00849 49 255 1.1E-7 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_3182 abd2c97d5f8ed463648a5031c28f7549 472 SUPERFAMILY SSF53187 40 458 6.02E-58 T 11-10-2018 Patl_3182 abd2c97d5f8ed463648a5031c28f7549 472 Gene3D G3DSA:3.50.30.30 101 250 2.3E-150 T 11-10-2018 Patl_3182 abd2c97d5f8ed463648a5031c28f7549 472 Pfam PF04389 Peptidase family M28 261 448 2.6E-25 T 11-10-2018 IPR007484 Peptidase M28 Patl_3182 abd2c97d5f8ed463648a5031c28f7549 472 Pfam PF02225 PA domain 147 233 1.0E-5 T 11-10-2018 IPR003137 PA domain Patl_3182 abd2c97d5f8ed463648a5031c28f7549 472 Gene3D G3DSA:3.40.630.10 48 449 2.3E-150 T 11-10-2018 Patl_3376 652da80308ccacbd68a85f736a11ab72 269 SUPERFAMILY SSF51261 70 264 1.44E-45 T 11-10-2018 IPR011055 Duplicated hybrid motif Patl_3376 652da80308ccacbd68a85f736a11ab72 269 Gene3D G3DSA:2.70.70.10 113 268 1.9E-40 T 11-10-2018 IPR011055 Duplicated hybrid motif Patl_3376 652da80308ccacbd68a85f736a11ab72 269 Pfam PF01551 Peptidase family M23 167 262 2.4E-25 T 11-10-2018 IPR016047 Peptidase M23 Patl_0417 1c5e18c073f84c987c436a2b5e446edc 462 SUPERFAMILY SSF53790 214 458 5.1E-83 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Patl_0417 1c5e18c073f84c987c436a2b5e446edc 462 SUPERFAMILY SSF75615 114 206 1.02E-22 T 11-10-2018 Patl_0417 1c5e18c073f84c987c436a2b5e446edc 462 PIRSF PIRSF036426 1 462 2.6E-193 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Patl_0417 1c5e18c073f84c987c436a2b5e446edc 462 Gene3D G3DSA:3.40.1010.10 215 332 3.9E-46 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Patl_0417 1c5e18c073f84c987c436a2b5e446edc 462 Pfam PF13241 Putative NAD(P)-binding 6 115 6.8E-29 T 11-10-2018 Patl_0417 1c5e18c073f84c987c436a2b5e446edc 462 Hamap MF_01646 Siroheme synthase [cysG]. 1 461 51.303 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Patl_0417 1c5e18c073f84c987c436a2b5e446edc 462 SUPERFAMILY SSF51735 1 112 2.63E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0417 1c5e18c073f84c987c436a2b5e446edc 462 Gene3D G3DSA:3.40.50.720 1 112 4.2E-36 T 11-10-2018 Patl_0417 1c5e18c073f84c987c436a2b5e446edc 462 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 8.9E-68 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Patl_0417 1c5e18c073f84c987c436a2b5e446edc 462 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 217 452 6.5E-94 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Patl_0417 1c5e18c073f84c987c436a2b5e446edc 462 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 219 428 1.9E-51 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Patl_0417 1c5e18c073f84c987c436a2b5e446edc 462 Gene3D G3DSA:3.30.950.10 333 462 1.6E-48 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Patl_0417 1c5e18c073f84c987c436a2b5e446edc 462 Pfam PF10414 Sirohaem synthase dimerisation region 153 207 6.7E-19 T 11-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Patl_0417 1c5e18c073f84c987c436a2b5e446edc 462 Gene3D G3DSA:3.30.160.110 113 148 3.2E-16 T 11-10-2018 Patl_0417 1c5e18c073f84c987c436a2b5e446edc 462 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 297 330 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Patl_0417 1c5e18c073f84c987c436a2b5e446edc 462 Gene3D G3DSA:1.10.8.210 149 212 1.3E-8 T 11-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Patl_2455 8d6c514fcea176762f2ad7ee93cc0272 114 Gene3D G3DSA:1.10.10.370 44 114 9.7E-32 T 11-10-2018 Patl_2455 8d6c514fcea176762f2ad7ee93cc0272 114 PIRSF PIRSF006223 7 114 5.7E-42 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Patl_2455 8d6c514fcea176762f2ad7ee93cc0272 114 SUPERFAMILY SSF69721 5 114 9.02E-41 T 11-10-2018 IPR025526 DsrC-like domain superfamily Patl_2455 8d6c514fcea176762f2ad7ee93cc0272 114 Gene3D G3DSA:3.30.1420.10 4 43 3.4E-11 T 11-10-2018 Patl_2455 8d6c514fcea176762f2ad7ee93cc0272 114 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 7 114 9.9E-51 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Patl_2455 8d6c514fcea176762f2ad7ee93cc0272 114 Pfam PF04358 DsrC like protein 9 114 5.0E-44 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE Patl_3656 de07eafa4fbad1bdfcadea51466e434d 389 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 6 140 1.3E-37 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Patl_3656 de07eafa4fbad1bdfcadea51466e434d 389 Gene3D G3DSA:3.40.50.720 4 367 1.7E-125 T 11-10-2018 Patl_3656 de07eafa4fbad1bdfcadea51466e434d 389 SMART SM01002 149 313 8.6E-69 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Patl_3656 de07eafa4fbad1bdfcadea51466e434d 389 Gene3D G3DSA:3.40.50.720 140 320 1.7E-125 T 11-10-2018 Patl_3656 de07eafa4fbad1bdfcadea51466e434d 389 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 145 370 1.4E-59 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Patl_3656 de07eafa4fbad1bdfcadea51466e434d 389 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 11-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 Patl_3656 de07eafa4fbad1bdfcadea51466e434d 389 SUPERFAMILY SSF52283 3 171 7.23E-42 T 11-10-2018 Patl_3656 de07eafa4fbad1bdfcadea51466e434d 389 SUPERFAMILY SSF51735 140 313 5.52E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3656 de07eafa4fbad1bdfcadea51466e434d 389 SMART SM01003 5 140 5.1E-52 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Patl_0594 4c4901996116cd97aa2a3f24e3da3195 142 SMART SM00649 9 141 6.0E-84 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Patl_0594 4c4901996116cd97aa2a3f24e3da3195 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 3.0E-30 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal Patl_0594 4c4901996116cd97aa2a3f24e3da3195 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 2.0E-16 T 11-10-2018 Patl_0594 4c4901996116cd97aa2a3f24e3da3195 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.268 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Patl_0594 4c4901996116cd97aa2a3f24e3da3195 142 SUPERFAMILY SSF54747 3 73 6.54E-30 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Patl_0594 4c4901996116cd97aa2a3f24e3da3195 142 Gene3D G3DSA:3.30.1550.10 2 72 6.4E-35 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Patl_0594 4c4901996116cd97aa2a3f24e3da3195 142 Gene3D G3DSA:1.10.10.2720 73 142 2.5E-28 T 11-10-2018 Patl_0594 4c4901996116cd97aa2a3f24e3da3195 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0594 4c4901996116cd97aa2a3f24e3da3195 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.0E-24 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Patl_0594 4c4901996116cd97aa2a3f24e3da3195 142 SUPERFAMILY SSF46906 68 141 2.49E-25 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Patl_0594 4c4901996116cd97aa2a3f24e3da3195 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 4.2E-65 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3762 8823aa2b0a6de4409e4c4f8bac61a59c 272 PIRSF PIRSF001332 20 259 2.2E-54 T 11-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 Patl_3762 8823aa2b0a6de4409e4c4f8bac61a59c 272 Gene3D G3DSA:3.30.1330.80 113 235 2.3E-57 T 11-10-2018 Patl_3762 8823aa2b0a6de4409e4c4f8bac61a59c 272 Pfam PF03306 Alpha-acetolactate decarboxylase 38 255 1.4E-58 T 11-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 Patl_3762 8823aa2b0a6de4409e4c4f8bac61a59c 272 Gene3D G3DSA:3.30.1330.80 38 253 2.3E-57 T 11-10-2018 Patl_3762 8823aa2b0a6de4409e4c4f8bac61a59c 272 SUPERFAMILY SSF117856 37 256 1.88E-59 T 11-10-2018 Patl_1926 0e930f7c44325fd9bc59003b18867609 318 SUPERFAMILY SSF52540 35 255 4.91E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1926 0e930f7c44325fd9bc59003b18867609 318 Gene3D G3DSA:3.40.50.300 19 303 7.7E-10 T 11-10-2018 Patl_1241 a91d6a381278f7df601ea2b3c9ca443b 175 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 170 4.1E-34 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Patl_1241 a91d6a381278f7df601ea2b3c9ca443b 175 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 173 25.13 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Patl_1241 a91d6a381278f7df601ea2b3c9ca443b 175 SUPERFAMILY SSF46565 1 74 9.68E-15 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Patl_1241 a91d6a381278f7df601ea2b3c9ca443b 175 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 166 1.7E-19 T 11-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Patl_1241 a91d6a381278f7df601ea2b3c9ca443b 175 SUPERFAMILY SSF47144 78 174 2.62E-21 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Patl_1241 a91d6a381278f7df601ea2b3c9ca443b 175 Gene3D G3DSA:1.10.287.110 1 79 3.0E-21 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Patl_1241 a91d6a381278f7df601ea2b3c9ca443b 175 Gene3D G3DSA:1.20.1280.20 80 173 4.1E-26 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Patl_1241 a91d6a381278f7df601ea2b3c9ca443b 175 SMART SM00271 1 66 5.2E-5 T 11-10-2018 IPR001623 DnaJ domain Patl_2487 f47ad2072492b993bb80c8d881cc0576 237 SUPERFAMILY SSF52540 11 215 1.14E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2487 f47ad2072492b993bb80c8d881cc0576 237 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 4 235 8.5E-84 T 11-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 Patl_2487 f47ad2072492b993bb80c8d881cc0576 237 Gene3D G3DSA:1.10.8.60 170 236 6.1E-27 T 11-10-2018 Patl_2487 f47ad2072492b993bb80c8d881cc0576 237 Gene3D G3DSA:3.40.50.300 1 166 2.0E-31 T 11-10-2018 Patl_2487 f47ad2072492b993bb80c8d881cc0576 237 Pfam PF00308 Bacterial dnaA protein 12 216 2.0E-15 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Patl_4203 c5b2c8b7d405f937bc17fde97dfab0fe 608 Pfam PF07549 SecD/SecF GG Motif 121 143 2.1E-4 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Patl_4203 c5b2c8b7d405f937bc17fde97dfab0fe 608 Pfam PF13721 SecD export protein N-terminal TM region 11 106 2.8E-11 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain Patl_4203 c5b2c8b7d405f937bc17fde97dfab0fe 608 Pfam PF02355 Protein export membrane protein 423 593 7.9E-17 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Patl_4203 c5b2c8b7d405f937bc17fde97dfab0fe 608 SUPERFAMILY SSF82866 401 597 3.4E-41 T 11-10-2018 Patl_4203 c5b2c8b7d405f937bc17fde97dfab0fe 608 Gene3D G3DSA:3.30.1360.200 285 422 4.8E-39 T 11-10-2018 Patl_4203 c5b2c8b7d405f937bc17fde97dfab0fe 608 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 127 591 6.3E-116 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Patl_4203 c5b2c8b7d405f937bc17fde97dfab0fe 608 Gene3D G3DSA:3.30.70.3400 230 427 4.8E-39 T 11-10-2018 Patl_4203 c5b2c8b7d405f937bc17fde97dfab0fe 608 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 342 584 5.5E-68 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Patl_4203 c5b2c8b7d405f937bc17fde97dfab0fe 608 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 7 607 44.124 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Patl_3688 5d5d8ef17bdcc7156c35af3cd7fbb1d9 399 Gene3D G3DSA:3.20.20.140 26 399 5.9E-126 T 11-10-2018 Patl_3688 5d5d8ef17bdcc7156c35af3cd7fbb1d9 399 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 34 390 1.2E-100 T 11-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 Patl_3688 5d5d8ef17bdcc7156c35af3cd7fbb1d9 399 SUPERFAMILY SSF51556 28 397 5.44E-101 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_1513 38530517aaa2e08d5178753a0af6e707 448 Gene3D G3DSA:3.90.1300.10 11 445 6.9E-103 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Patl_1513 38530517aaa2e08d5178753a0af6e707 448 SUPERFAMILY SSF75304 5 445 7.19E-105 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Patl_1513 38530517aaa2e08d5178753a0af6e707 448 Pfam PF01425 Amidase 36 428 2.4E-76 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Patl_2568 a9ad90f5962e6a3acecf268ea4cd9e39 358 Pfam PF00924 Mechanosensitive ion channel 134 336 2.4E-44 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Patl_2568 a9ad90f5962e6a3acecf268ea4cd9e39 358 Gene3D G3DSA:2.30.30.60 191 241 5.4E-11 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Patl_2568 a9ad90f5962e6a3acecf268ea4cd9e39 358 SUPERFAMILY SSF82861 98 174 1.7E-10 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Patl_2568 a9ad90f5962e6a3acecf268ea4cd9e39 358 SUPERFAMILY SSF50182 176 241 2.98E-16 T 11-10-2018 IPR010920 LSM domain superfamily Patl_2568 a9ad90f5962e6a3acecf268ea4cd9e39 358 Gene3D G3DSA:3.30.70.100 245 341 2.4E-17 T 11-10-2018 Patl_2568 a9ad90f5962e6a3acecf268ea4cd9e39 358 SUPERFAMILY SSF82689 250 346 1.07E-19 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Patl_3288 9bae986ffd3a47c1a9df99b3c3c1fb4f 396 SUPERFAMILY SSF102114 18 395 1.06E-106 T 11-10-2018 Patl_3288 9bae986ffd3a47c1a9df99b3c3c1fb4f 396 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 21 387 7.8E-124 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 Patl_3288 9bae986ffd3a47c1a9df99b3c3c1fb4f 396 Pfam PF04055 Radical SAM superfamily 24 189 2.3E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Patl_3288 9bae986ffd3a47c1a9df99b3c3c1fb4f 396 Pfam PF06969 HemN C-terminal domain 321 385 3.1E-10 T 11-10-2018 IPR010723 HemN, C-terminal Patl_3288 9bae986ffd3a47c1a9df99b3c3c1fb4f 396 Gene3D G3DSA:3.80.30.20 2 314 7.3E-95 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Patl_3288 9bae986ffd3a47c1a9df99b3c3c1fb4f 396 SMART SM00729 19 236 2.0E-50 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Patl_2929 3b96ecf9868ad1c5ab4ef3e1100d2d36 305 Gene3D G3DSA:3.20.20.70 2 302 1.3E-133 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2929 3b96ecf9868ad1c5ab4ef3e1100d2d36 305 Pfam PF00682 HMGL-like 8 282 1.1E-60 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Patl_2929 3b96ecf9868ad1c5ab4ef3e1100d2d36 305 SUPERFAMILY SSF51569 5 300 3.11E-78 T 11-10-2018 Patl_1264 c1bf7e044669d0939c000c6775b524b0 1155 Pfam PF14579 Helix-hairpin-helix motif 804 893 5.5E-26 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_1264 c1bf7e044669d0939c000c6775b524b0 1155 Gene3D G3DSA:3.20.20.140 1 270 9.3E-90 T 11-10-2018 Patl_1264 c1bf7e044669d0939c000c6775b524b0 1155 Gene3D G3DSA:1.10.10.1600 433 510 1.6E-33 T 11-10-2018 Patl_1264 c1bf7e044669d0939c000c6775b524b0 1155 Pfam PF02811 PHP domain 8 172 9.7E-45 T 11-10-2018 IPR004013 PHP domain GO:0003824 Patl_1264 c1bf7e044669d0939c000c6775b524b0 1155 SUPERFAMILY SSF89550 5 263 1.69E-14 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Patl_1264 c1bf7e044669d0939c000c6775b524b0 1155 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1026 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_1264 c1bf7e044669d0939c000c6775b524b0 1155 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 731 4.7E-180 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_1264 c1bf7e044669d0939c000c6775b524b0 1155 SMART SM00481 7 74 4.5E-24 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Patl_1540 b043192113781076dfa23fae3d95122e 309 Gene3D G3DSA:1.10.8.10 17 111 1.7E-8 T 11-10-2018 Patl_1540 b043192113781076dfa23fae3d95122e 309 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 209 215 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Patl_1540 b043192113781076dfa23fae3d95122e 309 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 70 271 8.1E-62 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Patl_1540 b043192113781076dfa23fae3d95122e 309 Pfam PF05175 Methyltransferase small domain 139 221 1.5E-16 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Patl_1540 b043192113781076dfa23fae3d95122e 309 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 14 299 1.8E-129 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Patl_1540 b043192113781076dfa23fae3d95122e 309 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 7 305 51.045 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Patl_1540 b043192113781076dfa23fae3d95122e 309 PIRSF PIRSF037167 1 309 4.7E-136 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 Patl_1540 b043192113781076dfa23fae3d95122e 309 Gene3D G3DSA:3.40.50.150 114 285 3.1E-48 T 11-10-2018 Patl_1540 b043192113781076dfa23fae3d95122e 309 SUPERFAMILY SSF53335 26 272 1.81E-53 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_1540 b043192113781076dfa23fae3d95122e 309 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 16 304 2.8E-88 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Patl_2970 92c74a59727bb8dbb6c843ec07a3fa44 232 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 1.7E-66 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Patl_2970 92c74a59727bb8dbb6c843ec07a3fa44 232 PIRSF PIRSF006102 1 219 8.3E-79 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Patl_2970 92c74a59727bb8dbb6c843ec07a3fa44 232 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 9 209 5.4E-86 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Patl_2970 92c74a59727bb8dbb6c843ec07a3fa44 232 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.804 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 Patl_0678 b557df1282fd4cfdd25c51f529183315 197 Pfam PF01381 Helix-turn-helix 38 84 2.2E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_0678 b557df1282fd4cfdd25c51f529183315 197 SUPERFAMILY SSF47413 30 85 2.28E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_0678 b557df1282fd4cfdd25c51f529183315 197 SMART SM00530 36 90 9.7E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_0678 b557df1282fd4cfdd25c51f529183315 197 Gene3D G3DSA:1.10.260.40 31 87 6.0E-11 T 11-10-2018 Patl_3157 d79544000ca971aa31166536aa14c22c 320 SUPERFAMILY SSF54637 61 156 2.54E-6 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_3157 d79544000ca971aa31166536aa14c22c 320 SUPERFAMILY SSF54637 185 271 2.78E-17 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_3157 d79544000ca971aa31166536aa14c22c 320 Gene3D G3DSA:3.10.129.10 33 320 5.0E-68 T 11-10-2018 Patl_3157 d79544000ca971aa31166536aa14c22c 320 PRINTS PR01483 Fatty acid synthase signature 190 212 4.5E-7 T 11-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 Patl_3157 d79544000ca971aa31166536aa14c22c 320 PRINTS PR01483 Fatty acid synthase signature 212 233 4.5E-7 T 11-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 Patl_3157 d79544000ca971aa31166536aa14c22c 320 Pfam PF01575 MaoC like domain 194 278 3.6E-12 T 11-10-2018 IPR002539 MaoC-like dehydratase domain Patl_2361 eef06bf5741d1936a4da8db1e4c1dff0 227 Pfam PF00005 ABC transporter 24 172 1.6E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_2361 eef06bf5741d1936a4da8db1e4c1dff0 227 Gene3D G3DSA:3.40.50.300 1 225 2.4E-63 T 11-10-2018 Patl_2361 eef06bf5741d1936a4da8db1e4c1dff0 227 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 2.5E-99 T 11-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 Patl_2361 eef06bf5741d1936a4da8db1e4c1dff0 227 SMART SM00382 33 223 7.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2361 eef06bf5741d1936a4da8db1e4c1dff0 227 SUPERFAMILY SSF52540 4 222 3.34E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2361 eef06bf5741d1936a4da8db1e4c1dff0 227 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_3920 27ec8b247bb9ee36f199ddcb910004fe 237 Gene3D G3DSA:1.10.10.10 144 236 2.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3920 27ec8b247bb9ee36f199ddcb910004fe 237 SUPERFAMILY SSF52172 4 137 1.57E-30 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3920 27ec8b247bb9ee36f199ddcb910004fe 237 SMART SM00448 7 120 4.1E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3920 27ec8b247bb9ee36f199ddcb910004fe 237 Gene3D G3DSA:3.40.50.2300 1 128 4.2E-28 T 11-10-2018 Patl_3920 27ec8b247bb9ee36f199ddcb910004fe 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 230 2.8E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_3920 27ec8b247bb9ee36f199ddcb910004fe 237 TIGRFAM TIGR03787 marine_sort_RR: proteobacterial dedicated sortase system response regulator 7 233 6.0E-128 T 11-10-2018 IPR022305 Sortase system response regulator Patl_3920 27ec8b247bb9ee36f199ddcb910004fe 237 Pfam PF00072 Response regulator receiver domain 9 120 3.8E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3920 27ec8b247bb9ee36f199ddcb910004fe 237 SUPERFAMILY SSF46894 133 231 1.53E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_3920 27ec8b247bb9ee36f199ddcb910004fe 237 SMART SM00862 158 231 2.5E-12 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_2544 42b2a44fa9cb7618b7df555976c7b60e 572 SMART SM00387 308 423 2.4E-36 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2544 42b2a44fa9cb7618b7df555976c7b60e 572 SUPERFAMILY SSF52172 440 565 2.56E-35 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2544 42b2a44fa9cb7618b7df555976c7b60e 572 SMART SM00448 443 562 1.3E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2544 42b2a44fa9cb7618b7df555976c7b60e 572 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 308 421 1.1E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2544 42b2a44fa9cb7618b7df555976c7b60e 572 SMART SM00388 196 261 1.6E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2544 42b2a44fa9cb7618b7df555976c7b60e 572 Gene3D G3DSA:3.40.50.2300 427 569 2.3E-37 T 11-10-2018 Patl_2544 42b2a44fa9cb7618b7df555976c7b60e 572 Pfam PF00072 Response regulator receiver domain 445 561 4.9E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2544 42b2a44fa9cb7618b7df555976c7b60e 572 Gene3D G3DSA:1.10.287.130 162 259 1.8E-26 T 11-10-2018 Patl_2544 42b2a44fa9cb7618b7df555976c7b60e 572 Pfam PF00512 His Kinase A (phospho-acceptor) domain 196 259 3.8E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2544 42b2a44fa9cb7618b7df555976c7b60e 572 Gene3D G3DSA:3.30.565.10 260 426 4.0E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2544 42b2a44fa9cb7618b7df555976c7b60e 572 SUPERFAMILY SSF47384 187 262 1.8E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_2544 42b2a44fa9cb7618b7df555976c7b60e 572 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 401 2.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2544 42b2a44fa9cb7618b7df555976c7b60e 572 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 376 2.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2544 42b2a44fa9cb7618b7df555976c7b60e 572 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 420 2.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2544 42b2a44fa9cb7618b7df555976c7b60e 572 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 362 2.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2544 42b2a44fa9cb7618b7df555976c7b60e 572 SUPERFAMILY SSF55874 250 421 1.2E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 SUPERFAMILY SSF49493 113 261 3.92E-20 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 Gene3D G3DSA:2.60.260.20 252 332 9.4E-28 T 11-10-2018 Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 41.737 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 PRINTS PR00625 DnaJ domain signature 25 40 5.1E-31 T 11-10-2018 IPR001623 DnaJ domain Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 PRINTS PR00625 DnaJ domain signature 62 81 5.1E-31 T 11-10-2018 IPR001623 DnaJ domain Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 PRINTS PR00625 DnaJ domain signature 42 62 5.1E-31 T 11-10-2018 IPR001623 DnaJ domain Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 PRINTS PR00625 DnaJ domain signature 7 25 5.1E-31 T 11-10-2018 IPR001623 DnaJ domain Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 Pfam PF00684 DnaJ central domain 146 206 2.3E-14 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 SMART SM00271 4 62 1.0E-30 T 11-10-2018 IPR001623 DnaJ domain Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 Gene3D G3DSA:2.60.260.20 116 248 4.3E-38 T 11-10-2018 Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 SUPERFAMILY SSF46565 1 106 1.57E-36 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-10-2018 IPR018253 DnaJ domain, conserved site Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 Gene3D G3DSA:2.10.230.10 146 206 4.3E-38 T 11-10-2018 Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 349 4.1E-140 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 SUPERFAMILY SSF49493 258 343 8.89E-21 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 Pfam PF00226 DnaJ domain 5 67 2.2E-27 T 11-10-2018 IPR001623 DnaJ domain Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 Pfam PF01556 DnaJ C terminal domain 120 332 5.0E-45 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 SUPERFAMILY SSF57938 133 210 1.14E-22 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Patl_1988 f2d68302e59eede0b4a0fffeaa770075 379 Gene3D G3DSA:1.10.287.110 1 114 3.3E-37 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Patl_0855 4c1d43617b2ded117d82927f7715aeb6 262 Pfam PF04199 Putative cyclase 10 190 2.3E-36 T 11-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Patl_0855 4c1d43617b2ded117d82927f7715aeb6 262 SUPERFAMILY SSF102198 7 260 3.79E-54 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Patl_0855 4c1d43617b2ded117d82927f7715aeb6 262 Gene3D G3DSA:3.50.30.50 5 262 2.1E-46 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Patl_3807 ee2cab79e3b53b6879dbb2fb7ebea74a 346 Gene3D G3DSA:1.10.443.10 170 342 6.7E-10 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Patl_3807 ee2cab79e3b53b6879dbb2fb7ebea74a 346 SUPERFAMILY SSF56349 175 318 1.06E-10 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Patl_3807 ee2cab79e3b53b6879dbb2fb7ebea74a 346 Pfam PF00589 Phage integrase family 176 328 7.9E-7 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Patl_1006 9583a35f499ba82b36bd0c2bd49c309c 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 3.2E-31 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Patl_1006 9583a35f499ba82b36bd0c2bd49c309c 167 SUPERFAMILY SSF54211 80 159 1.14E-27 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_1006 9583a35f499ba82b36bd0c2bd49c309c 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 13 75 3.9E-29 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Patl_1006 9583a35f499ba82b36bd0c2bd49c309c 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site Patl_1006 9583a35f499ba82b36bd0c2bd49c309c 167 Gene3D G3DSA:3.30.230.10 75 167 1.6E-37 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Patl_1006 9583a35f499ba82b36bd0c2bd49c309c 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 35.044 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Patl_1006 9583a35f499ba82b36bd0c2bd49c309c 167 SUPERFAMILY SSF54768 10 77 8.37E-24 T 11-10-2018 Patl_1006 9583a35f499ba82b36bd0c2bd49c309c 167 Gene3D G3DSA:3.30.160.20 1 74 1.0E-31 T 11-10-2018 Patl_1006 9583a35f499ba82b36bd0c2bd49c309c 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 11 163 5.2E-69 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Patl_1524 d2286db66eb5e46e23d0cf370fb4498b 219 PIRSF PIRSF023956 1 219 1.7E-80 T 11-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 Patl_1524 d2286db66eb5e46e23d0cf370fb4498b 219 Gene3D G3DSA:3.40.50.150 1 217 1.3E-50 T 11-10-2018 Patl_1524 d2286db66eb5e46e23d0cf370fb4498b 219 SUPERFAMILY SSF53335 1 202 1.22E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_1524 d2286db66eb5e46e23d0cf370fb4498b 219 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 204 9.0E-51 T 11-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 Patl_1524 d2286db66eb5e46e23d0cf370fb4498b 219 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 217 34.422 T 11-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 Patl_1524 d2286db66eb5e46e23d0cf370fb4498b 219 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 216 4.4E-72 T 11-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 Patl_4219 2e03154b5c43232687206398eaf88c52 333 Gene3D G3DSA:3.20.20.70 1 333 2.8E-149 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_4219 2e03154b5c43232687206398eaf88c52 333 SMART SM01004 5 329 2.0E-251 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Patl_4219 2e03154b5c43232687206398eaf88c52 333 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 194 213 1.1E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Patl_4219 2e03154b5c43232687206398eaf88c52 333 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 125 139 1.1E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Patl_4219 2e03154b5c43232687206398eaf88c52 333 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 273 288 1.1E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Patl_4219 2e03154b5c43232687206398eaf88c52 333 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 248 264 1.1E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Patl_4219 2e03154b5c43232687206398eaf88c52 333 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 156 175 1.1E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Patl_4219 2e03154b5c43232687206398eaf88c52 333 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 303 322 1.1E-57 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Patl_4219 2e03154b5c43232687206398eaf88c52 333 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 248 260 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Patl_4219 2e03154b5c43232687206398eaf88c52 333 Pfam PF00490 Delta-aminolevulinic acid dehydratase 8 327 8.5E-145 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Patl_4219 2e03154b5c43232687206398eaf88c52 333 PIRSF PIRSF001415 1 332 2.7E-153 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Patl_4219 2e03154b5c43232687206398eaf88c52 333 SUPERFAMILY SSF51569 4 329 1.47E-146 T 11-10-2018 Patl_1115 261018f21d9e9a5da23a3231816c2f13 899 TIGRFAM TIGR03186 AKGDH_not_PDH: alpha-ketoglutarate dehydrogenase 13 898 0.0 T 11-10-2018 IPR017600 Alpha-ketoglutarate dehydrogenase Patl_1115 261018f21d9e9a5da23a3231816c2f13 899 SUPERFAMILY SSF52922 712 896 4.71E-49 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Patl_1115 261018f21d9e9a5da23a3231816c2f13 899 Gene3D G3DSA:3.40.50.970 63 482 3.3E-126 T 11-10-2018 Patl_1115 261018f21d9e9a5da23a3231816c2f13 899 PIRSF PIRSF000156 4 899 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Patl_1115 261018f21d9e9a5da23a3231816c2f13 899 Gene3D G3DSA:3.40.50.970 483 716 6.2E-105 T 11-10-2018 Patl_1115 261018f21d9e9a5da23a3231816c2f13 899 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 88 310 2.1E-5 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Patl_1115 261018f21d9e9a5da23a3231816c2f13 899 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 13 897 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Patl_1115 261018f21d9e9a5da23a3231816c2f13 899 Gene3D G3DSA:3.40.50.920 717 898 5.6E-69 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Patl_1115 261018f21d9e9a5da23a3231816c2f13 899 SUPERFAMILY SSF52518 484 710 7.18E-95 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Patl_1115 261018f21d9e9a5da23a3231816c2f13 899 SUPERFAMILY SSF52518 64 478 1.27E-123 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Patl_2937 88810a8e8a8e859a886ec9f2215e4fd5 251 Gene3D G3DSA:1.25.40.10 129 251 1.6E-28 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2937 88810a8e8a8e859a886ec9f2215e4fd5 251 Pfam PF13174 Tetratricopeptide repeat 205 237 3.8E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2937 88810a8e8a8e859a886ec9f2215e4fd5 251 Pfam PF13432 Tetratricopeptide repeat 144 190 6.0E-7 T 11-10-2018 Patl_2937 88810a8e8a8e859a886ec9f2215e4fd5 251 Gene3D G3DSA:1.20.5.110 30 105 3.0E-22 T 11-10-2018 Patl_2937 88810a8e8a8e859a886ec9f2215e4fd5 251 SUPERFAMILY SSF48452 132 239 1.23E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2937 88810a8e8a8e859a886ec9f2215e4fd5 251 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 130 245 3.1E-38 T 11-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal Patl_2937 88810a8e8a8e859a886ec9f2215e4fd5 251 Pfam PF16331 TolA binding protein trimerisation 32 104 5.4E-22 T 11-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 Patl_2937 88810a8e8a8e859a886ec9f2215e4fd5 251 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 2 250 19.128 T 11-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 Patl_0001 da07b000a786d325564c622f3204d127 474 ProSitePatterns PS01008 DnaA protein signature. 432 451 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Patl_0001 da07b000a786d325564c622f3204d127 474 SUPERFAMILY SSF48295 370 473 4.71E-37 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Patl_0001 da07b000a786d325564c622f3204d127 474 Gene3D G3DSA:3.40.50.300 137 304 3.5E-49 T 11-10-2018 Patl_0001 da07b000a786d325564c622f3204d127 474 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 472 2.0E-184 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Patl_0001 da07b000a786d325564c622f3204d127 474 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 383 451 2.5E-32 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Patl_0001 da07b000a786d325564c622f3204d127 474 SMART SM00760 382 451 2.2E-44 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Patl_0001 da07b000a786d325564c622f3204d127 474 Pfam PF11638 DnaA N-terminal domain 1 62 2.4E-20 T 11-10-2018 IPR024633 DnaA N-terminal domain Patl_0001 da07b000a786d325564c622f3204d127 474 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 432 451 1.0E-53 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Patl_0001 da07b000a786d325564c622f3204d127 474 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 172 192 1.0E-53 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Patl_0001 da07b000a786d325564c622f3204d127 474 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 204 218 1.0E-53 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Patl_0001 da07b000a786d325564c622f3204d127 474 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 236 250 1.0E-53 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Patl_0001 da07b000a786d325564c622f3204d127 474 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 270 297 1.0E-53 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Patl_0001 da07b000a786d325564c622f3204d127 474 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 473 33.899 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Patl_0001 da07b000a786d325564c622f3204d127 474 Pfam PF00308 Bacterial dnaA protein 140 356 8.2E-97 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Patl_0001 da07b000a786d325564c622f3204d127 474 Gene3D G3DSA:1.10.1750.10 381 474 2.6E-38 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Patl_0001 da07b000a786d325564c622f3204d127 474 SMART SM00382 171 384 3.2E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0001 da07b000a786d325564c622f3204d127 474 SUPERFAMILY SSF52540 140 350 2.39E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0001 da07b000a786d325564c622f3204d127 474 Gene3D G3DSA:1.10.8.60 305 375 2.0E-23 T 11-10-2018 Patl_0001 da07b000a786d325564c622f3204d127 474 Gene3D G3DSA:3.30.300.180 1 111 4.2E-31 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily Patl_2991 a1a1785c0179b768ed94ff7cd9280c00 324 Gene3D G3DSA:3.40.50.150 14 180 6.1E-17 T 11-10-2018 Patl_2991 a1a1785c0179b768ed94ff7cd9280c00 324 Pfam PF08241 Methyltransferase domain 62 157 1.0E-12 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Patl_2991 a1a1785c0179b768ed94ff7cd9280c00 324 SUPERFAMILY SSF53335 46 165 3.58E-16 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_2154 b936e9800f36a1a8780a7fb900245b20 264 Gene3D G3DSA:3.40.190.10 28 248 1.4E-66 T 11-10-2018 Patl_2154 b936e9800f36a1a8780a7fb900245b20 264 Pfam PF13531 Bacterial extracellular solute-binding protein 25 249 1.2E-38 T 11-10-2018 Patl_2154 b936e9800f36a1a8780a7fb900245b20 264 Gene3D G3DSA:3.40.190.10 104 206 1.4E-66 T 11-10-2018 Patl_2154 b936e9800f36a1a8780a7fb900245b20 264 PIRSF PIRSF004846 1 252 6.6E-46 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Patl_2154 b936e9800f36a1a8780a7fb900245b20 264 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 29 245 9.4E-50 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Patl_2154 b936e9800f36a1a8780a7fb900245b20 264 SUPERFAMILY SSF53850 23 248 1.13E-51 T 11-10-2018 Patl_1426 91b38f4724a5e8e473d787294081b782 351 Gene3D G3DSA:3.90.180.10 9 345 5.1E-136 T 11-10-2018 Patl_1426 91b38f4724a5e8e473d787294081b782 351 Gene3D G3DSA:3.40.50.720 171 325 5.1E-136 T 11-10-2018 Patl_1426 91b38f4724a5e8e473d787294081b782 351 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 149 1.5E-28 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_1426 91b38f4724a5e8e473d787294081b782 351 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 183 211 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Patl_1426 91b38f4724a5e8e473d787294081b782 351 SUPERFAMILY SSF51735 153 316 3.59E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1426 91b38f4724a5e8e473d787294081b782 351 Pfam PF00107 Zinc-binding dehydrogenase 190 310 1.5E-20 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_1426 91b38f4724a5e8e473d787294081b782 351 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Patl_1426 91b38f4724a5e8e473d787294081b782 351 SUPERFAMILY SSF50129 9 177 3.2E-50 T 11-10-2018 IPR011032 GroES-like superfamily Patl_1426 91b38f4724a5e8e473d787294081b782 351 SMART SM00829 14 346 2.7E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_3903 f506154e7148535ecfe69f1fdb188594 486 Gene3D G3DSA:3.40.720.10 13 478 1.4E-99 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_3903 f506154e7148535ecfe69f1fdb188594 486 Pfam PF00884 Sulfatase 28 360 4.4E-63 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_3903 f506154e7148535ecfe69f1fdb188594 486 SUPERFAMILY SSF53649 27 452 7.5E-96 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_0274 8983c9bea3028b8307a88a7b54e58730 216 Pfam PF00578 AhpC/TSA family 45 191 3.3E-33 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_0274 8983c9bea3028b8307a88a7b54e58730 216 SUPERFAMILY SSF52833 42 214 7.92E-39 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_0274 8983c9bea3028b8307a88a7b54e58730 216 Gene3D G3DSA:3.40.30.10 27 214 4.8E-42 T 11-10-2018 Patl_3699 34f8c72f6cabfdddab6b071e3eb1af51 244 Gene3D G3DSA:1.10.760.10 26 209 1.2E-13 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_3699 34f8c72f6cabfdddab6b071e3eb1af51 244 SUPERFAMILY SSF46626 17 208 2.04E-46 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_3699 34f8c72f6cabfdddab6b071e3eb1af51 244 Pfam PF02167 Cytochrome C1 family 34 243 8.5E-14 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Patl_3699 34f8c72f6cabfdddab6b071e3eb1af51 244 PRINTS PR00603 Cytochrome C1 signature 104 128 5.0E-7 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Patl_3699 34f8c72f6cabfdddab6b071e3eb1af51 244 PRINTS PR00603 Cytochrome C1 signature 190 209 5.0E-7 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Patl_3699 34f8c72f6cabfdddab6b071e3eb1af51 244 PRINTS PR00603 Cytochrome C1 signature 42 61 5.0E-7 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Patl_3699 34f8c72f6cabfdddab6b071e3eb1af51 244 PRINTS PR00603 Cytochrome C1 signature 209 224 5.0E-7 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 Patl_3470 bd76228c764deb934af9ffcf3d42f88d 532 SUPERFAMILY SSF52540 282 518 1.76E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3470 bd76228c764deb934af9ffcf3d42f88d 532 Pfam PF13469 Sulfotransferase family 285 476 6.7E-43 T 11-10-2018 Patl_3470 bd76228c764deb934af9ffcf3d42f88d 532 SMART SM00028 139 172 0.0042 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3470 bd76228c764deb934af9ffcf3d42f88d 532 SMART SM00028 38 71 19.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3470 bd76228c764deb934af9ffcf3d42f88d 532 SMART SM00028 105 138 0.0038 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3470 bd76228c764deb934af9ffcf3d42f88d 532 Pfam PF13432 Tetratricopeptide repeat 9 72 2.8E-6 T 11-10-2018 Patl_3470 bd76228c764deb934af9ffcf3d42f88d 532 Pfam PF13432 Tetratricopeptide repeat 152 182 0.0013 T 11-10-2018 Patl_3470 bd76228c764deb934af9ffcf3d42f88d 532 Gene3D G3DSA:1.25.40.10 96 240 2.1E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3470 bd76228c764deb934af9ffcf3d42f88d 532 Gene3D G3DSA:3.40.50.300 272 528 7.3E-61 T 11-10-2018 Patl_3470 bd76228c764deb934af9ffcf3d42f88d 532 SUPERFAMILY SSF48452 5 236 1.14E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3470 bd76228c764deb934af9ffcf3d42f88d 532 Gene3D G3DSA:1.25.40.10 3 95 9.3E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0983 536cd5822669940dc2d23fa8d6e781ed 381 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 108 145 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Patl_0983 536cd5822669940dc2d23fa8d6e781ed 381 Pfam PF01546 Peptidase family M20/M25/M40 74 377 2.1E-30 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 Patl_0983 536cd5822669940dc2d23fa8d6e781ed 381 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 381 55.223 T 11-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 Patl_0983 536cd5822669940dc2d23fa8d6e781ed 381 SUPERFAMILY SSF53187 6 380 8.86E-56 T 11-10-2018 Patl_0983 536cd5822669940dc2d23fa8d6e781ed 381 SUPERFAMILY SSF55031 179 292 8.37E-20 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Patl_0983 536cd5822669940dc2d23fa8d6e781ed 381 Gene3D G3DSA:3.40.630.10 14 363 1.8E-82 T 11-10-2018 Patl_0983 536cd5822669940dc2d23fa8d6e781ed 381 Pfam PF07687 Peptidase dimerisation domain 176 286 1.5E-22 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain Patl_0983 536cd5822669940dc2d23fa8d6e781ed 381 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Patl_0983 536cd5822669940dc2d23fa8d6e781ed 381 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 374 5.4E-126 T 11-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 Patl_0983 536cd5822669940dc2d23fa8d6e781ed 381 Gene3D G3DSA:3.30.70.360 179 301 1.8E-82 T 11-10-2018 Patl_0606 dbb724fb9a63044a5ca3d8f0f1c53e0d 872 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 529 541 - T 11-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Patl_0606 dbb724fb9a63044a5ca3d8f0f1c53e0d 872 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 2 872 17.521 T 11-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Patl_0606 dbb724fb9a63044a5ca3d8f0f1c53e0d 872 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 181 197 1.0E-65 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Patl_0606 dbb724fb9a63044a5ca3d8f0f1c53e0d 872 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 240 255 1.0E-65 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Patl_0606 dbb724fb9a63044a5ca3d8f0f1c53e0d 872 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 701 727 1.0E-65 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Patl_0606 dbb724fb9a63044a5ca3d8f0f1c53e0d 872 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 378 398 1.0E-65 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Patl_0606 dbb724fb9a63044a5ca3d8f0f1c53e0d 872 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 128 141 1.0E-65 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Patl_0606 dbb724fb9a63044a5ca3d8f0f1c53e0d 872 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 527 547 1.0E-65 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Patl_0606 dbb724fb9a63044a5ca3d8f0f1c53e0d 872 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 569 598 1.0E-65 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Patl_0606 dbb724fb9a63044a5ca3d8f0f1c53e0d 872 Pfam PF00311 Phosphoenolpyruvate carboxylase 123 872 3.8E-269 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Patl_0606 dbb724fb9a63044a5ca3d8f0f1c53e0d 872 SUPERFAMILY SSF51621 11 872 1.4E-302 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Patl_0606 dbb724fb9a63044a5ca3d8f0f1c53e0d 872 Gene3D G3DSA:1.20.1440.90 295 381 4.1E-24 T 11-10-2018 Patl_0606 dbb724fb9a63044a5ca3d8f0f1c53e0d 872 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 129 140 - T 11-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Patl_1554 0c689e4f3d49d2f8217be4ff54a3e3e9 217 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 76 129 4.0E-25 T 11-10-2018 Patl_1554 0c689e4f3d49d2f8217be4ff54a3e3e9 217 SUPERFAMILY SSF55681 6 206 9.94E-67 T 11-10-2018 Patl_1554 0c689e4f3d49d2f8217be4ff54a3e3e9 217 Hamap MF_00013 Octanoyltransferase [lipB]. 6 207 36.811 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Patl_1554 0c689e4f3d49d2f8217be4ff54a3e3e9 217 PIRSF PIRSF016262 3 217 1.6E-58 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Patl_1554 0c689e4f3d49d2f8217be4ff54a3e3e9 217 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 72 87 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Patl_1554 0c689e4f3d49d2f8217be4ff54a3e3e9 217 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 28 187 2.0E-70 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Patl_1554 0c689e4f3d49d2f8217be4ff54a3e3e9 217 Gene3D G3DSA:3.30.930.10 2 204 3.9E-60 T 11-10-2018 Patl_1554 0c689e4f3d49d2f8217be4ff54a3e3e9 217 Pfam PF03099 Biotin/lipoate A/B protein ligase family 61 160 2.2E-8 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 Gene3D G3DSA:2.40.50.100 4 80 7.2E-18 T 11-10-2018 Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 433 663 1.9E-76 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 SUPERFAMILY SSF52777 422 664 1.82E-80 T 11-10-2018 Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 256 285 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 SUPERFAMILY SSF51230 232 325 7.2E-22 T 11-10-2018 IPR011053 Single hybrid motif Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 Pfam PF02817 e3 binding domain 358 393 6.7E-16 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 Gene3D G3DSA:3.30.559.10 418 664 2.1E-94 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 SUPERFAMILY SSF51230 3 95 8.11E-20 T 11-10-2018 IPR011053 Single hybrid motif Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 Gene3D G3DSA:4.10.320.10 358 402 8.3E-21 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 232 664 1.3E-190 T 11-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 141 170 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 Pfam PF00364 Biotin-requiring enzyme 119 189 1.7E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 Pfam PF00364 Biotin-requiring enzyme 6 76 3.7E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 Pfam PF00364 Biotin-requiring enzyme 234 303 3.0E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 SUPERFAMILY SSF51230 116 209 2.36E-21 T 11-10-2018 IPR011053 Single hybrid motif Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 SUPERFAMILY SSF47005 354 397 5.1E-13 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 Gene3D G3DSA:2.40.50.100 116 196 1.6E-17 T 11-10-2018 Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 Gene3D G3DSA:2.40.50.100 232 311 7.2E-19 T 11-10-2018 Patl_3351 bf20ff7a58ed38c2641455c485a6ef50 664 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Patl_1560 e0a569abea3e98b5e159aeb1384f44e7 643 Gene3D G3DSA:3.90.1310.10 65 249 3.6E-50 T 11-10-2018 Patl_1560 e0a569abea3e98b5e159aeb1384f44e7 643 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 240 2.9E-44 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Patl_1560 e0a569abea3e98b5e159aeb1384f44e7 643 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 618 50.853 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Patl_1560 e0a569abea3e98b5e159aeb1384f44e7 643 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 615 3.3E-240 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Patl_1560 e0a569abea3e98b5e159aeb1384f44e7 643 SUPERFAMILY SSF56601 255 620 8.18E-96 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Patl_1560 e0a569abea3e98b5e159aeb1384f44e7 643 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 611 1.7E-71 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Patl_1560 e0a569abea3e98b5e159aeb1384f44e7 643 Gene3D G3DSA:3.40.710.10 250 626 1.1E-93 T 11-10-2018 Patl_1560 e0a569abea3e98b5e159aeb1384f44e7 643 SUPERFAMILY SSF56519 58 253 1.29E-54 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Patl_1560 e0a569abea3e98b5e159aeb1384f44e7 643 Gene3D G3DSA:3.30.1390.30 86 161 3.6E-50 T 11-10-2018 Patl_2567 82ed9828b9db484e5d787cbcedc02591 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 5.0E-123 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Patl_2567 82ed9828b9db484e5d787cbcedc02591 315 Gene3D G3DSA:3.40.50.2020 7 302 6.1E-135 T 11-10-2018 Patl_2567 82ed9828b9db484e5d787cbcedc02591 315 Gene3D G3DSA:3.40.50.2020 148 290 6.1E-135 T 11-10-2018 Patl_2567 82ed9828b9db484e5d787cbcedc02591 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Patl_2567 82ed9828b9db484e5d787cbcedc02591 315 SUPERFAMILY SSF53271 69 306 1.18E-65 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Patl_2567 82ed9828b9db484e5d787cbcedc02591 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 4.3E-29 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Patl_2567 82ed9828b9db484e5d787cbcedc02591 315 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.176 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Patl_2567 82ed9828b9db484e5d787cbcedc02591 315 SMART SM01400 4 121 1.3E-76 T 11-10-2018 Patl_2567 82ed9828b9db484e5d787cbcedc02591 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 8.2E-50 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Patl_2552 f6fe275b1fec9f69f94e6ed9777e9e22 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_2552 f6fe275b1fec9f69f94e6ed9777e9e22 254 SUPERFAMILY SSF51735 5 252 2.15E-75 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2552 f6fe275b1fec9f69f94e6ed9777e9e22 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 251 5.3E-56 T 11-10-2018 Patl_2552 f6fe275b1fec9f69f94e6ed9777e9e22 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 5.0E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2552 f6fe275b1fec9f69f94e6ed9777e9e22 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 5.0E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2552 f6fe275b1fec9f69f94e6ed9777e9e22 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 5.0E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2552 f6fe275b1fec9f69f94e6ed9777e9e22 254 Gene3D G3DSA:3.40.50.720 1 252 7.8E-76 T 11-10-2018 Patl_2552 f6fe275b1fec9f69f94e6ed9777e9e22 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 8.2E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2552 f6fe275b1fec9f69f94e6ed9777e9e22 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 8.2E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2552 f6fe275b1fec9f69f94e6ed9777e9e22 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 8.2E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2552 f6fe275b1fec9f69f94e6ed9777e9e22 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 8.2E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2552 f6fe275b1fec9f69f94e6ed9777e9e22 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 8.2E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2552 f6fe275b1fec9f69f94e6ed9777e9e22 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 8.2E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1478 68b54d3c0578269e799dbc11561194f2 441 Gene3D G3DSA:3.40.640.10 86 339 1.1E-61 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_1478 68b54d3c0578269e799dbc11561194f2 441 Gene3D G3DSA:3.90.1150.10 74 434 1.1E-61 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_1478 68b54d3c0578269e799dbc11561194f2 441 SUPERFAMILY SSF53383 72 439 1.73E-58 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_1478 68b54d3c0578269e799dbc11561194f2 441 Pfam PF00266 Aminotransferase class-V 120 395 4.8E-33 T 11-10-2018 IPR000192 Aminotransferase class V domain Patl_3355 a3ab89b6178514ee61a91fc5ca42c844 313 Pfam PF00561 alpha/beta hydrolase fold 29 282 8.1E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_3355 a3ab89b6178514ee61a91fc5ca42c844 313 SUPERFAMILY SSF53474 15 294 7.5E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3355 a3ab89b6178514ee61a91fc5ca42c844 313 Gene3D G3DSA:3.40.50.1820 11 299 4.0E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0407 7119ef57d564e547a35c032a061037a7 90 SMART SM01152 1 73 2.9E-34 T 11-10-2018 IPR003746 Protein of unknown function DUF167 Patl_0407 7119ef57d564e547a35c032a061037a7 90 Hamap MF_00634 UPF0235 protein YggU [yggU]. 1 82 18.263 T 11-10-2018 IPR003746 Protein of unknown function DUF167 Patl_0407 7119ef57d564e547a35c032a061037a7 90 Gene3D G3DSA:3.30.1200.10 1 90 1.9E-32 T 11-10-2018 IPR036591 YggU-like superfamily Patl_0407 7119ef57d564e547a35c032a061037a7 90 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 2 71 1.4E-26 T 11-10-2018 IPR003746 Protein of unknown function DUF167 Patl_0407 7119ef57d564e547a35c032a061037a7 90 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 3 73 1.5E-22 T 11-10-2018 IPR005228 Conserved hypothetical protein CHP00251 Patl_0407 7119ef57d564e547a35c032a061037a7 90 SUPERFAMILY SSF69786 2 85 9.42E-30 T 11-10-2018 IPR036591 YggU-like superfamily Patl_3458 afb425b46e776dedca7f7077e5a23ece 231 SUPERFAMILY SSF52833 16 87 3.61E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_3458 afb425b46e776dedca7f7077e5a23ece 231 Pfam PF04399 Glutaredoxin 2, C terminal domain 101 230 1.4E-46 T 11-10-2018 IPR007494 Glutaredoxin 2, C-terminal Patl_3458 afb425b46e776dedca7f7077e5a23ece 231 SUPERFAMILY SSF47616 96 230 6.12E-37 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Patl_3458 afb425b46e776dedca7f7077e5a23ece 231 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 18 226 1.3E-71 T 11-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 Patl_3458 afb425b46e776dedca7f7077e5a23ece 231 Gene3D G3DSA:3.40.30.10 23 108 3.4E-30 T 11-10-2018 Patl_3458 afb425b46e776dedca7f7077e5a23ece 231 Pfam PF13417 Glutathione S-transferase, N-terminal domain 18 89 1.1E-7 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Patl_3458 afb425b46e776dedca7f7077e5a23ece 231 Gene3D G3DSA:1.20.1050.10 109 231 1.8E-42 T 11-10-2018 Patl_0467 e0a99a74414b75fb1254043ca347a933 736 Pfam PF00437 Type II/IV secretion system protein 359 618 1.3E-73 T 11-10-2018 IPR001482 Type II/IV secretion system protein Patl_0467 e0a99a74414b75fb1254043ca347a933 736 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 206 309 2.8E-7 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal Patl_0467 e0a99a74414b75fb1254043ca347a933 736 SUPERFAMILY SSF55781 2 161 1.47E-21 T 11-10-2018 Patl_0467 e0a99a74414b75fb1254043ca347a933 736 Pfam PF01590 GAF domain 31 161 8.1E-10 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_0467 e0a99a74414b75fb1254043ca347a933 736 SUPERFAMILY SSF52540 332 729 1.71E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0467 e0a99a74414b75fb1254043ca347a933 736 SMART SM00382 479 604 5.2E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0467 e0a99a74414b75fb1254043ca347a933 736 SMART SM00065 9 170 0.0015 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_0467 e0a99a74414b75fb1254043ca347a933 736 Gene3D G3DSA:3.30.450.40 1 167 7.9E-25 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_0467 e0a99a74414b75fb1254043ca347a933 736 Gene3D G3DSA:3.30.450.90 317 452 2.0E-41 T 11-10-2018 Patl_0467 e0a99a74414b75fb1254043ca347a933 736 SUPERFAMILY SSF160246 176 289 2.09E-7 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Patl_0467 e0a99a74414b75fb1254043ca347a933 736 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 546 560 - T 11-10-2018 IPR001482 Type II/IV secretion system protein Patl_0467 e0a99a74414b75fb1254043ca347a933 736 Gene3D G3DSA:3.40.50.300 455 735 2.3E-102 T 11-10-2018 Patl_1794 bdff7505a428b21a7e26ae1580f8a01c 426 ProSitePatterns PS00480 Citrate synthase signature. 302 314 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Patl_1794 bdff7505a428b21a7e26ae1580f8a01c 426 Pfam PF00285 Citrate synthase, C-terminal domain 45 410 5.1E-131 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Patl_1794 bdff7505a428b21a7e26ae1580f8a01c 426 Gene3D G3DSA:2.20.28.60 1 49 2.4E-22 T 11-10-2018 Patl_1794 bdff7505a428b21a7e26ae1580f8a01c 426 PRINTS PR00143 Citrate synthase signature 164 177 1.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Patl_1794 bdff7505a428b21a7e26ae1580f8a01c 426 PRINTS PR00143 Citrate synthase signature 378 392 1.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Patl_1794 bdff7505a428b21a7e26ae1580f8a01c 426 PRINTS PR00143 Citrate synthase signature 240 268 1.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Patl_1794 bdff7505a428b21a7e26ae1580f8a01c 426 PRINTS PR00143 Citrate synthase signature 295 315 1.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Patl_1794 bdff7505a428b21a7e26ae1580f8a01c 426 PRINTS PR00143 Citrate synthase signature 218 233 1.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Patl_1794 bdff7505a428b21a7e26ae1580f8a01c 426 PRINTS PR00143 Citrate synthase signature 358 374 1.2E-53 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Patl_1794 bdff7505a428b21a7e26ae1580f8a01c 426 Gene3D G3DSA:1.10.230.10 267 375 2.0E-144 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Patl_1794 bdff7505a428b21a7e26ae1580f8a01c 426 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 421 4.6E-229 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 Patl_1794 bdff7505a428b21a7e26ae1580f8a01c 426 SUPERFAMILY SSF48256 5 425 1.83E-164 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Patl_1794 bdff7505a428b21a7e26ae1580f8a01c 426 PIRSF PIRSF001369 37 426 8.5E-166 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type Patl_1794 bdff7505a428b21a7e26ae1580f8a01c 426 Gene3D G3DSA:1.10.580.10 56 410 2.0E-144 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Patl_3391 af21f60f0257aec47e08137395443328 425 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 311 422 5.0E-18 T 11-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal Patl_3391 af21f60f0257aec47e08137395443328 425 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 326 337 - T 11-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 Patl_3391 af21f60f0257aec47e08137395443328 425 Pfam PF13975 gag-polyprotein putative aspartyl protease 316 409 4.0E-19 T 11-10-2018 Patl_3391 af21f60f0257aec47e08137395443328 425 SUPERFAMILY SSF50630 310 416 8.0E-13 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily Patl_3391 af21f60f0257aec47e08137395443328 425 Gene3D G3DSA:2.40.70.10 302 424 3.4E-25 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily Patl_1829 646cc115b503961543c708a08fbf8546 372 Gene3D G3DSA:3.40.50.720 177 315 6.7E-157 T 11-10-2018 Patl_1829 646cc115b503961543c708a08fbf8546 372 Gene3D G3DSA:3.90.180.10 9 367 6.7E-157 T 11-10-2018 Patl_1829 646cc115b503961543c708a08fbf8546 372 Pfam PF00107 Zinc-binding dehydrogenase 200 331 2.9E-25 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_1829 646cc115b503961543c708a08fbf8546 372 SMART SM00829 15 370 0.0013 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_1829 646cc115b503961543c708a08fbf8546 372 SUPERFAMILY SSF50129 321 372 1.13E-12 T 11-10-2018 IPR011032 GroES-like superfamily Patl_1829 646cc115b503961543c708a08fbf8546 372 SUPERFAMILY SSF50129 2 188 1.42E-75 T 11-10-2018 IPR011032 GroES-like superfamily Patl_1829 646cc115b503961543c708a08fbf8546 372 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 5 372 1.1E-225 T 11-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 Patl_1829 646cc115b503961543c708a08fbf8546 372 SUPERFAMILY SSF51735 163 337 1.92E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1829 646cc115b503961543c708a08fbf8546 372 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 157 3.2E-26 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_1829 646cc115b503961543c708a08fbf8546 372 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Patl_3252 c5f988047521ad4e97a9c1a92d35277c 164 SUPERFAMILY SSF82093 30 145 2.09E-38 T 11-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 Patl_3252 c5f988047521ad4e97a9c1a92d35277c 164 Gene3D G3DSA:2.40.50.140 30 145 1.1E-38 T 11-10-2018 Patl_3252 c5f988047521ad4e97a9c1a92d35277c 164 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 149 31.808 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 Patl_3252 c5f988047521ad4e97a9c1a92d35277c 164 Pfam PF03100 CcmE 4 139 5.7E-45 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 Patl_0190 12303f61e65b019d21778ea584f9b73a 480 Pfam PF01523 Putative modulator of DNA gyrase 34 331 7.7E-69 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Patl_0190 12303f61e65b019d21778ea584f9b73a 480 PIRSF PIRSF004919 14 480 1.8E-143 T 11-10-2018 IPR025502 TldD Patl_0190 12303f61e65b019d21778ea584f9b73a 480 SUPERFAMILY SSF111283 17 479 6.67E-131 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Patl_0190 12303f61e65b019d21778ea584f9b73a 480 Gene3D G3DSA:3.30.2290.10 7 236 3.7E-15 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Patl_0994 534100de4e039b537c7b1c6112c6e677 810 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 726 2.4E-269 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Patl_0994 534100de4e039b537c7b1c6112c6e677 810 Pfam PF08206 Ribonuclease B OB domain 87 144 3.9E-21 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Patl_0994 534100de4e039b537c7b1c6112c6e677 810 Hamap MF_01895 Ribonuclease R [rnr]. 38 726 56.322 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Patl_0994 534100de4e039b537c7b1c6112c6e677 810 Gene3D G3DSA:2.40.50.140 72 148 3.1E-18 T 11-10-2018 Patl_0994 534100de4e039b537c7b1c6112c6e677 810 Gene3D G3DSA:2.40.50.140 646 757 3.5E-24 T 11-10-2018 Patl_0994 534100de4e039b537c7b1c6112c6e677 810 SUPERFAMILY SSF50249 138 236 1.59E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_0994 534100de4e039b537c7b1c6112c6e677 810 SUPERFAMILY SSF50249 645 725 7.1E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_0994 534100de4e039b537c7b1c6112c6e677 810 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 73 724 4.3E-252 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Patl_0994 534100de4e039b537c7b1c6112c6e677 810 SMART SM00357 86 145 5.3E-12 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Patl_0994 534100de4e039b537c7b1c6112c6e677 810 Pfam PF00773 RNB domain 260 591 6.5E-113 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Patl_0994 534100de4e039b537c7b1c6112c6e677 810 ProSitePatterns PS01175 Ribonuclease II family signature. 559 583 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site Patl_0994 534100de4e039b537c7b1c6112c6e677 810 Pfam PF00575 S1 RNA binding domain 643 723 5.2E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 Patl_0994 534100de4e039b537c7b1c6112c6e677 810 SUPERFAMILY SSF50249 67 147 1.24E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_0994 534100de4e039b537c7b1c6112c6e677 810 SUPERFAMILY SSF50249 220 643 9.14E-145 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_0994 534100de4e039b537c7b1c6112c6e677 810 SMART SM00955 260 592 3.0E-184 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Patl_0994 534100de4e039b537c7b1c6112c6e677 810 SMART SM00316 643 726 2.4E-14 T 11-10-2018 IPR022967 RNA-binding domain, S1 Patl_3010 b674f3d545426131fd232e2085235c81 261 SMART SM00382 38 227 5.7E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3010 b674f3d545426131fd232e2085235c81 261 SUPERFAMILY SSF52540 14 249 6.3E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3010 b674f3d545426131fd232e2085235c81 261 Pfam PF00005 ABC transporter 31 178 4.8E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_3010 b674f3d545426131fd232e2085235c81 261 Gene3D G3DSA:3.40.50.300 2 260 4.7E-69 T 11-10-2018 Patl_1909 80e92500a3dd605d311742484f1b0175 263 SUPERFAMILY SSF46689 216 260 1.51E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1909 80e92500a3dd605d311742484f1b0175 263 SMART SM00342 176 258 4.0E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_1909 80e92500a3dd605d311742484f1b0175 263 Pfam PF12833 Helix-turn-helix domain 182 259 1.0E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_1909 80e92500a3dd605d311742484f1b0175 263 Gene3D G3DSA:1.10.10.60 158 262 2.1E-19 T 11-10-2018 Patl_1909 80e92500a3dd605d311742484f1b0175 263 Gene3D G3DSA:2.60.120.10 15 97 1.9E-7 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_1909 80e92500a3dd605d311742484f1b0175 263 Pfam PF02311 AraC-like ligand binding domain 21 98 1.4E-8 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Patl_1909 80e92500a3dd605d311742484f1b0175 263 SUPERFAMILY SSF51182 24 209 7.12E-11 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_0506 061ea85838a2e73c17ee08aa46061bca 226 Pfam PF11201 Protein of unknown function (DUF2982) 69 219 5.9E-58 T 11-10-2018 IPR021367 Protein of unknown function DUF2982 Patl_1780 3ddadde4301e3f3e38dbaf5af9960a56 585 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 11 579 3.9E-222 T 11-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 Patl_1780 3ddadde4301e3f3e38dbaf5af9960a56 585 Pfam PF00005 ABC transporter 357 507 5.0E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1780 3ddadde4301e3f3e38dbaf5af9960a56 585 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_1780 3ddadde4301e3f3e38dbaf5af9960a56 585 Gene3D G3DSA:1.20.1560.10 3 326 5.0E-70 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Patl_1780 3ddadde4301e3f3e38dbaf5af9960a56 585 Pfam PF00664 ABC transporter transmembrane region 30 295 2.2E-50 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Patl_1780 3ddadde4301e3f3e38dbaf5af9960a56 585 SMART SM00382 366 553 3.5E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1780 3ddadde4301e3f3e38dbaf5af9960a56 585 SUPERFAMILY SSF52540 331 578 1.07E-91 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1780 3ddadde4301e3f3e38dbaf5af9960a56 585 SUPERFAMILY SSF90123 12 321 2.22E-63 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Patl_1780 3ddadde4301e3f3e38dbaf5af9960a56 585 Gene3D G3DSA:3.40.50.300 327 579 1.3E-91 T 11-10-2018 Patl_1666 9214457c601d3e6e500528c4be9de362 945 Pfam PF16187 Middle or third domain of peptidase_M16 391 667 2.6E-63 T 11-10-2018 IPR032632 Peptidase M16, middle/third domain Patl_1666 9214457c601d3e6e500528c4be9de362 945 Gene3D G3DSA:3.30.830.10 14 253 2.4E-67 T 11-10-2018 Patl_1666 9214457c601d3e6e500528c4be9de362 945 SUPERFAMILY SSF63411 731 918 1.17E-32 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Patl_1666 9214457c601d3e6e500528c4be9de362 945 SUPERFAMILY SSF63411 28 253 1.67E-46 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Patl_1666 9214457c601d3e6e500528c4be9de362 945 Pfam PF05193 Peptidase M16 inactive domain 208 374 1.2E-12 T 11-10-2018 IPR007863 Peptidase M16, C-terminal Patl_1666 9214457c601d3e6e500528c4be9de362 945 Pfam PF05193 Peptidase M16 inactive domain 674 833 1.3E-5 T 11-10-2018 IPR007863 Peptidase M16, C-terminal Patl_1666 9214457c601d3e6e500528c4be9de362 945 Pfam PF00675 Insulinase (Peptidase family M16) 48 185 6.1E-31 T 11-10-2018 IPR011765 Peptidase M16, N-terminal Patl_1666 9214457c601d3e6e500528c4be9de362 945 SUPERFAMILY SSF63411 495 711 2.02E-40 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Patl_1666 9214457c601d3e6e500528c4be9de362 945 Gene3D G3DSA:3.30.830.10 495 875 1.0E-82 T 11-10-2018 Patl_1666 9214457c601d3e6e500528c4be9de362 945 Gene3D G3DSA:3.30.830.10 643 906 1.0E-82 T 11-10-2018 Patl_1666 9214457c601d3e6e500528c4be9de362 945 SUPERFAMILY SSF63411 262 493 1.49E-60 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Patl_1666 9214457c601d3e6e500528c4be9de362 945 Gene3D G3DSA:3.30.830.10 266 493 9.3E-56 T 11-10-2018 Patl_4223 cae8ec910932c9bf429f6944e3966053 433 Pfam PF07497 Rho termination factor, RNA-binding domain 64 137 1.4E-31 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Patl_4223 cae8ec910932c9bf429f6944e3966053 433 SMART SM00357 64 130 3.1E-17 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Patl_4223 cae8ec910932c9bf429f6944e3966053 433 Gene3D G3DSA:1.10.720.10 11 59 2.0E-23 T 11-10-2018 Patl_4223 cae8ec910932c9bf429f6944e3966053 433 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 172 375 4.7E-22 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_4223 cae8ec910932c9bf429f6944e3966053 433 SMART SM00382 182 367 1.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_4223 cae8ec910932c9bf429f6944e3966053 433 Pfam PF07498 Rho termination factor, N-terminal domain 17 59 1.7E-17 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Patl_4223 cae8ec910932c9bf429f6944e3966053 433 SUPERFAMILY SSF50249 60 137 2.06E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_4223 cae8ec910932c9bf429f6944e3966053 433 TIGRFAM TIGR00767 rho: transcription termination factor Rho 14 429 6.9E-218 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Patl_4223 cae8ec910932c9bf429f6944e3966053 433 SUPERFAMILY SSF52540 102 383 4.42E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4223 cae8ec910932c9bf429f6944e3966053 433 SMART SM00959 17 59 3.8E-18 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Patl_4223 cae8ec910932c9bf429f6944e3966053 433 Gene3D G3DSA:2.40.50.140 60 135 4.1E-34 T 11-10-2018 Patl_4223 cae8ec910932c9bf429f6944e3966053 433 SUPERFAMILY SSF68912 13 58 1.53E-12 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Patl_4223 cae8ec910932c9bf429f6944e3966053 433 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 431 243.942 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Patl_4223 cae8ec910932c9bf429f6944e3966053 433 Gene3D G3DSA:3.40.50.300 142 429 5.0E-132 T 11-10-2018 Patl_2218 9e7dd5b187583b08495f63cbc206e29c 1268 SUPERFAMILY SSF53720 552 1025 2.88E-124 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_2218 9e7dd5b187583b08495f63cbc206e29c 1268 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 63 184 3.9E-42 T 11-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Patl_2218 9e7dd5b187583b08495f63cbc206e29c 1268 Pfam PF01619 Proline dehydrogenase 195 489 1.4E-88 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 Patl_2218 9e7dd5b187583b08495f63cbc206e29c 1268 SUPERFAMILY SSF51730 187 529 1.88E-105 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like Patl_2218 9e7dd5b187583b08495f63cbc206e29c 1268 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 529 1024 2.4E-201 T 11-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Patl_2218 9e7dd5b187583b08495f63cbc206e29c 1268 PIRSF PIRSF000197 2 1267 0.0 T 11-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Patl_2218 9e7dd5b187583b08495f63cbc206e29c 1268 Gene3D G3DSA:3.40.309.10 804 995 2.4E-149 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Patl_2218 9e7dd5b187583b08495f63cbc206e29c 1268 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 829 840 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Patl_2218 9e7dd5b187583b08495f63cbc206e29c 1268 Pfam PF00171 Aldehyde dehydrogenase family 574 1024 3.0E-117 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Patl_2218 9e7dd5b187583b08495f63cbc206e29c 1268 SUPERFAMILY SSF53720 1048 1205 3.01E-5 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_2218 9e7dd5b187583b08495f63cbc206e29c 1268 Gene3D G3DSA:3.20.20.220 140 524 9.4E-127 T 11-10-2018 Patl_2218 9e7dd5b187583b08495f63cbc206e29c 1268 Gene3D G3DSA:3.40.605.10 552 1024 2.4E-149 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_2218 9e7dd5b187583b08495f63cbc206e29c 1268 SUPERFAMILY SSF81935 7 186 3.53E-52 T 11-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Patl_0232 b455552bbedffcab27edaa0d70e9e5d4 525 Gene3D G3DSA:3.30.300.160 26 115 7.9E-21 T 11-10-2018 Patl_0232 b455552bbedffcab27edaa0d70e9e5d4 525 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 38 522 4.6E-219 T 11-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 Patl_0232 b455552bbedffcab27edaa0d70e9e5d4 525 Gene3D G3DSA:3.40.50.300 249 525 1.3E-117 T 11-10-2018 Patl_0232 b455552bbedffcab27edaa0d70e9e5d4 525 Pfam PF00437 Type II/IV secretion system protein 150 415 3.1E-93 T 11-10-2018 IPR001482 Type II/IV secretion system protein Patl_0232 b455552bbedffcab27edaa0d70e9e5d4 525 Gene3D G3DSA:3.30.450.90 116 248 3.9E-54 T 11-10-2018 Patl_0232 b455552bbedffcab27edaa0d70e9e5d4 525 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 343 357 - T 11-10-2018 IPR001482 Type II/IV secretion system protein Patl_0232 b455552bbedffcab27edaa0d70e9e5d4 525 SUPERFAMILY SSF52540 132 522 5.49E-103 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0232 b455552bbedffcab27edaa0d70e9e5d4 525 SMART SM00382 276 399 4.6E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0232 b455552bbedffcab27edaa0d70e9e5d4 525 SUPERFAMILY SSF160246 38 102 5.49E-15 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Patl_4076 9a18c8d7e064241359f7f1ecad441ff2 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 13 88 1.7E-17 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Patl_4076 9a18c8d7e064241359f7f1ecad441ff2 298 Gene3D G3DSA:1.10.150.130 9 100 1.0E-15 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Patl_4076 9a18c8d7e064241359f7f1ecad441ff2 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 9 294 52.521 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Patl_4076 9a18c8d7e064241359f7f1ecad441ff2 298 Pfam PF00589 Phage integrase family 114 280 1.1E-43 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Patl_4076 9a18c8d7e064241359f7f1ecad441ff2 298 SUPERFAMILY SSF56349 6 284 5.3E-51 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Patl_4076 9a18c8d7e064241359f7f1ecad441ff2 298 Gene3D G3DSA:1.10.443.10 112 288 2.1E-51 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Patl_3695 b356486c96a0970a7bab39fff386bb86 197 Gene3D G3DSA:3.40.50.10490 1 195 9.0E-65 T 11-10-2018 Patl_3695 b356486c96a0970a7bab39fff386bb86 197 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 33.272 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 Patl_3695 b356486c96a0970a7bab39fff386bb86 197 SUPERFAMILY SSF53697 2 191 1.68E-50 T 11-10-2018 Patl_3695 b356486c96a0970a7bab39fff386bb86 197 Pfam PF13580 SIS domain 9 144 9.4E-35 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Patl_0430 3ccf8f8d25dbd8f2e7518085372f8bc2 436 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 431 1.5E-112 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 Patl_0430 3ccf8f8d25dbd8f2e7518085372f8bc2 436 SUPERFAMILY SSF56954 1 421 2.62E-93 T 11-10-2018 Patl_0430 3ccf8f8d25dbd8f2e7518085372f8bc2 436 Gene3D G3DSA:1.20.1600.10 21 436 5.3E-125 T 11-10-2018 Patl_0430 3ccf8f8d25dbd8f2e7518085372f8bc2 436 Pfam PF02321 Outer membrane efflux protein 25 202 4.5E-26 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Patl_0430 3ccf8f8d25dbd8f2e7518085372f8bc2 436 Pfam PF02321 Outer membrane efflux protein 227 417 9.4E-36 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Patl_0431 d4932ec478aa8a47648bfd8f7ebde354 206 ProSitePatterns PS00893 Nudix box signature. 93 114 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Patl_0431 d4932ec478aa8a47648bfd8f7ebde354 206 Gene3D G3DSA:3.90.79.10 2 205 4.4E-63 T 11-10-2018 Patl_0431 d4932ec478aa8a47648bfd8f7ebde354 206 Pfam PF00293 NUDIX domain 53 174 3.0E-12 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Patl_0431 d4932ec478aa8a47648bfd8f7ebde354 206 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 11 193 1.2E-58 T 11-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 Patl_0431 d4932ec478aa8a47648bfd8f7ebde354 206 SUPERFAMILY SSF55811 14 197 1.16E-45 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Patl_1899 9dd2d4cc2c4e842482e3100e1dc1340c 199 SUPERFAMILY SSF51283 1 190 1.96E-56 T 11-10-2018 IPR036157 dUTPase-like superfamily Patl_1899 9dd2d4cc2c4e842482e3100e1dc1340c 199 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 32.683 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Patl_1899 9dd2d4cc2c4e842482e3100e1dc1340c 199 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 3.6E-64 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Patl_1899 9dd2d4cc2c4e842482e3100e1dc1340c 199 Gene3D G3DSA:2.70.40.10 1 162 3.2E-50 T 11-10-2018 IPR036157 dUTPase-like superfamily Patl_1899 9dd2d4cc2c4e842482e3100e1dc1340c 199 Pfam PF00692 dUTPase 79 184 1.2E-9 T 11-10-2018 IPR029054 dUTPase-like Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 Gene3D G3DSA:3.30.70.1430 678 778 4.3E-138 T 11-10-2018 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 Gene3D G3DSA:3.30.70.1430 40 131 7.6E-165 T 11-10-2018 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 Gene3D G3DSA:1.20.1640.10 10 511 7.6E-165 T 11-10-2018 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 SUPERFAMILY SSF82714 199 279 1.44E-13 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 SUPERFAMILY SSF82866 912 1134 1.44E-52 T 11-10-2018 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 SUPERFAMILY SSF82693 678 773 1.05E-5 T 11-10-2018 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 Gene3D G3DSA:1.20.1640.10 624 1128 4.3E-138 T 11-10-2018 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 Pfam PF00873 AcrB/AcrD/AcrF family 4 503 5.9E-140 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 Pfam PF00873 AcrB/AcrD/AcrF family 624 1131 8.3E-110 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 SUPERFAMILY SSF82693 41 131 1.15E-19 T 11-10-2018 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 SUPERFAMILY SSF82714 827 912 3.01E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 Gene3D G3DSA:3.30.70.1320 132 341 7.6E-165 T 11-10-2018 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 PRINTS PR00702 Acriflavin resistance protein family signature 345 368 1.1E-50 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.1E-50 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.1E-50 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 1.1E-50 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 PRINTS PR00702 Acriflavin resistance protein family signature 372 393 1.1E-50 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 1.1E-50 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 1.1E-50 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 Gene3D G3DSA:3.30.70.1440 779 971 4.3E-138 T 11-10-2018 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 SUPERFAMILY SSF82866 305 502 4.84E-46 T 11-10-2018 Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 Gene3D G3DSA:3.30.2090.10 826 914 4.3E-138 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2230 7506634606b3639e23b9df0265c90e1b 1156 Gene3D G3DSA:3.30.2090.10 194 284 7.6E-165 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_1702 576a7efe64ec74e3d6ba3a632751aefe 370 Pfam PF00990 Diguanylate cyclase, GGDEF domain 209 364 3.7E-48 T 11-10-2018 IPR000160 GGDEF domain Patl_1702 576a7efe64ec74e3d6ba3a632751aefe 370 SMART SM00267 198 369 1.6E-57 T 11-10-2018 IPR000160 GGDEF domain Patl_1702 576a7efe64ec74e3d6ba3a632751aefe 370 Gene3D G3DSA:3.30.70.270 194 368 3.6E-55 T 11-10-2018 Patl_1702 576a7efe64ec74e3d6ba3a632751aefe 370 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 206 366 4.0E-49 T 11-10-2018 IPR000160 GGDEF domain Patl_1702 576a7efe64ec74e3d6ba3a632751aefe 370 SUPERFAMILY SSF55073 214 366 1.49E-46 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_1739 a2fd2b6c1ec34baa2ac8918ae35a703e 158 Gene3D G3DSA:2.40.280.10 5 133 4.0E-45 T 11-10-2018 IPR023620 Small protein B Patl_1739 a2fd2b6c1ec34baa2ac8918ae35a703e 158 ProSitePatterns PS01317 SsrA-binding protein. 31 43 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site Patl_1739 a2fd2b6c1ec34baa2ac8918ae35a703e 158 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 13 137 3.0E-68 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 Patl_1739 a2fd2b6c1ec34baa2ac8918ae35a703e 158 Pfam PF01668 SmpB protein 13 156 3.9E-57 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 Patl_1739 a2fd2b6c1ec34baa2ac8918ae35a703e 158 SUPERFAMILY SSF74982 7 137 2.09E-48 T 11-10-2018 IPR023620 Small protein B Patl_1739 a2fd2b6c1ec34baa2ac8918ae35a703e 158 TIGRFAM TIGR00086 smpB: SsrA-binding protein 13 155 3.7E-53 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 Patl_1739 a2fd2b6c1ec34baa2ac8918ae35a703e 158 Hamap MF_00023 SsrA-binding protein [smpB]. 1 158 68.779 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 Patl_1939 18e0668af10aa8212f8842ab46b13c3e 517 Pfam PF04820 Tryptophan halogenase 25 481 1.6E-122 T 11-10-2018 IPR006905 Flavin-dependent halogenase Patl_1939 18e0668af10aa8212f8842ab46b13c3e 517 SUPERFAMILY SSF51905 20 436 4.43E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1939 18e0668af10aa8212f8842ab46b13c3e 517 PIRSF PIRSF011396 19 516 6.0E-146 T 11-10-2018 IPR033856 Flavin-dependent tryptophan halogenase Patl_1939 18e0668af10aa8212f8842ab46b13c3e 517 Gene3D G3DSA:3.50.50.60 22 506 2.0E-162 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2196 4a6eeef96e9cb7f08cf9c3ad01e00219 440 SMART SM00267 1 161 3.6E-7 T 11-10-2018 IPR000160 GGDEF domain Patl_2196 4a6eeef96e9cb7f08cf9c3ad01e00219 440 Pfam PF00563 EAL domain 178 410 2.5E-62 T 11-10-2018 IPR001633 EAL domain Patl_2196 4a6eeef96e9cb7f08cf9c3ad01e00219 440 Gene3D G3DSA:3.30.70.270 2 171 5.2E-22 T 11-10-2018 Patl_2196 4a6eeef96e9cb7f08cf9c3ad01e00219 440 Gene3D G3DSA:3.20.20.450 173 431 5.5E-79 T 11-10-2018 IPR035919 EAL domain superfamily Patl_2196 4a6eeef96e9cb7f08cf9c3ad01e00219 440 Pfam PF00990 Diguanylate cyclase, GGDEF domain 5 154 2.0E-18 T 11-10-2018 IPR000160 GGDEF domain Patl_2196 4a6eeef96e9cb7f08cf9c3ad01e00219 440 SUPERFAMILY SSF55073 11 160 6.28E-22 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_2196 4a6eeef96e9cb7f08cf9c3ad01e00219 440 SMART SM00052 171 416 5.0E-76 T 11-10-2018 IPR001633 EAL domain Patl_2196 4a6eeef96e9cb7f08cf9c3ad01e00219 440 SUPERFAMILY SSF141868 178 423 1.7E-74 T 11-10-2018 IPR035919 EAL domain superfamily Patl_2962 4f952206b215d3b042ed4e3d0d55edaf 306 Pfam PF03466 LysR substrate binding domain 116 296 1.9E-9 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_2962 4f952206b215d3b042ed4e3d0d55edaf 306 Gene3D G3DSA:3.40.190.10 176 273 4.4E-5 T 11-10-2018 Patl_2962 4f952206b215d3b042ed4e3d0d55edaf 306 Gene3D G3DSA:1.10.10.10 9 99 1.0E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2962 4f952206b215d3b042ed4e3d0d55edaf 306 Gene3D G3DSA:3.40.190.10 118 294 4.4E-5 T 11-10-2018 Patl_2962 4f952206b215d3b042ed4e3d0d55edaf 306 SUPERFAMILY SSF46785 9 94 2.38E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2962 4f952206b215d3b042ed4e3d0d55edaf 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 4.0E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2962 4f952206b215d3b042ed4e3d0d55edaf 306 SUPERFAMILY SSF53850 95 302 1.19E-13 T 11-10-2018 Patl_0958 f420efe8b76fa1884fcda44302c481d4 779 Gene3D G3DSA:1.20.1640.10 230 388 7.6E-11 T 11-10-2018 Patl_0958 f420efe8b76fa1884fcda44302c481d4 779 SUPERFAMILY SSF82866 617 767 4.19E-24 T 11-10-2018 Patl_0958 f420efe8b76fa1884fcda44302c481d4 779 Gene3D G3DSA:1.20.1640.10 389 434 7.6E-11 T 11-10-2018 Patl_0958 f420efe8b76fa1884fcda44302c481d4 779 Gene3D G3DSA:1.20.1640.10 608 770 1.9E-12 T 11-10-2018 Patl_0958 f420efe8b76fa1884fcda44302c481d4 779 Pfam PF03176 MMPL family 144 382 2.7E-14 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Patl_0958 f420efe8b76fa1884fcda44302c481d4 779 Pfam PF03176 MMPL family 580 766 1.5E-10 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Patl_0958 f420efe8b76fa1884fcda44302c481d4 779 SUPERFAMILY SSF82866 175 381 1.1E-27 T 11-10-2018 Patl_2566 1709321596046122d35e4c7e92af6897 286 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 272 30.345 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Patl_2566 1709321596046122d35e4c7e92af6897 286 Gene3D G3DSA:3.30.230.10 3 161 3.0E-52 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Patl_2566 1709321596046122d35e4c7e92af6897 286 Pfam PF08544 GHMP kinases C terminal 217 259 8.0E-5 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain Patl_2566 1709321596046122d35e4c7e92af6897 286 SUPERFAMILY SSF55060 163 277 5.76E-33 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Patl_2566 1709321596046122d35e4c7e92af6897 286 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 8 279 1.3E-87 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Patl_2566 1709321596046122d35e4c7e92af6897 286 PIRSF PIRSF010376 5 280 1.9E-81 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Patl_2566 1709321596046122d35e4c7e92af6897 286 Gene3D G3DSA:3.30.70.890 163 280 1.3E-28 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Patl_2566 1709321596046122d35e4c7e92af6897 286 Pfam PF00288 GHMP kinases N terminal domain 88 146 1.1E-8 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Patl_2566 1709321596046122d35e4c7e92af6897 286 SUPERFAMILY SSF54211 7 159 3.64E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_1157 960ea99ca02e115efa573759fc3e4ed0 248 Gene3D G3DSA:3.30.450.20 11 133 1.5E-16 T 11-10-2018 Patl_1157 960ea99ca02e115efa573759fc3e4ed0 248 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 213 228 7.5E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Patl_1157 960ea99ca02e115efa573759fc3e4ed0 248 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 244 7.5E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Patl_1157 960ea99ca02e115efa573759fc3e4ed0 248 Pfam PF12833 Helix-turn-helix domain 167 245 5.6E-24 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_1157 960ea99ca02e115efa573759fc3e4ed0 248 Pfam PF08448 PAS fold 27 134 1.9E-17 T 11-10-2018 IPR013656 PAS fold-4 Patl_1157 960ea99ca02e115efa573759fc3e4ed0 248 SUPERFAMILY SSF55785 24 131 2.44E-14 T 11-10-2018 IPR035965 PAS domain superfamily Patl_1157 960ea99ca02e115efa573759fc3e4ed0 248 Gene3D G3DSA:1.10.10.60 141 248 2.3E-30 T 11-10-2018 Patl_1157 960ea99ca02e115efa573759fc3e4ed0 248 SUPERFAMILY SSF46689 148 195 1.43E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1157 960ea99ca02e115efa573759fc3e4ed0 248 SMART SM00342 161 244 1.2E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_1157 960ea99ca02e115efa573759fc3e4ed0 248 SUPERFAMILY SSF46689 197 247 1.97E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1405 57ad4caf0865203fbcef2cf5b9b47d7e 341 SUPERFAMILY SSF51735 127 304 1.23E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1405 57ad4caf0865203fbcef2cf5b9b47d7e 341 SUPERFAMILY SSF50129 5 146 6.99E-40 T 11-10-2018 IPR011032 GroES-like superfamily Patl_1405 57ad4caf0865203fbcef2cf5b9b47d7e 341 Gene3D G3DSA:3.40.50.720 129 307 1.9E-122 T 11-10-2018 Patl_1405 57ad4caf0865203fbcef2cf5b9b47d7e 341 Gene3D G3DSA:3.90.180.10 11 336 1.9E-122 T 11-10-2018 Patl_1405 57ad4caf0865203fbcef2cf5b9b47d7e 341 Pfam PF16884 N-terminal domain of oxidoreductase 7 109 2.5E-39 T 11-10-2018 Patl_1405 57ad4caf0865203fbcef2cf5b9b47d7e 341 SMART SM00829 19 336 7.7E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_1405 57ad4caf0865203fbcef2cf5b9b47d7e 341 Pfam PF00107 Zinc-binding dehydrogenase 161 254 2.7E-17 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 967 1079 1.4E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Gene3D G3DSA:1.10.287.130 841 921 1.2E-16 T 11-10-2018 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SUPERFAMILY SSF55781 276 422 5.67E-13 T 11-10-2018 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SUPERFAMILY SSF52172 1101 1217 3.7E-31 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Gene3D G3DSA:3.30.450.40 565 715 5.3E-24 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Pfam PF00072 Response regulator receiver domain 1103 1213 1.6E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SUPERFAMILY SSF55785 430 544 2.97E-14 T 11-10-2018 IPR035965 PAS domain superfamily Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SUPERFAMILY SSF55785 141 255 3.49E-10 T 11-10-2018 IPR035965 PAS domain superfamily Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SUPERFAMILY SSF55781 542 706 1.57E-20 T 11-10-2018 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Gene3D G3DSA:3.30.450.40 257 416 5.5E-12 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SMART SM00448 1101 1214 1.6E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Gene3D G3DSA:3.30.450.20 144 256 1.4E-19 T 11-10-2018 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SMART SM00086 792 834 5.3E-6 T 11-10-2018 IPR001610 PAC motif Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SMART SM00086 500 542 0.015 T 11-10-2018 IPR001610 PAC motif Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SMART SM00086 210 252 29.0 T 11-10-2018 IPR001610 PAC motif Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Gene3D G3DSA:2.10.70.100 497 544 8.4E-10 T 11-10-2018 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SUPERFAMILY SSF55874 909 1079 8.77E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Pfam PF00512 His Kinase A (phospho-acceptor) domain 855 917 3.6E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SMART SM00387 966 1080 6.3E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Gene3D G3DSA:3.30.450.20 421 493 6.0E-10 T 11-10-2018 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Gene3D G3DSA:3.40.50.12740 1100 1221 3.2E-32 T 11-10-2018 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SMART SM00091 720 786 2.8E-6 T 11-10-2018 IPR000014 PAS domain Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SMART SM00091 424 494 170.0 T 11-10-2018 IPR000014 PAS domain Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SMART SM00091 135 201 1.0 T 11-10-2018 IPR000014 PAS domain Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SUPERFAMILY SSF55785 706 832 2.79E-25 T 11-10-2018 IPR035965 PAS domain superfamily Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SMART SM00065 274 420 0.0044 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SMART SM00065 564 716 0.029 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1064 1077 8.0E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1022 1032 8.0E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1004 1018 8.0E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1039 1057 8.0E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 716 841 1.4E-12 T 11-10-2018 IPR000014 PAS domain Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 477 547 1.5E-5 T 11-10-2018 IPR000014 PAS domain Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 258 5.4E-6 T 11-10-2018 IPR000014 PAS domain Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Pfam PF08447 PAS fold 456 536 5.2E-15 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Pfam PF08447 PAS fold 745 828 4.7E-15 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Pfam PF13185 GAF domain 566 706 1.0E-12 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SMART SM00388 854 920 1.4E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Pfam PF01590 GAF domain 280 406 3.9E-5 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Gene3D G3DSA:3.30.565.10 922 1081 8.1E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Pfam PF08448 PAS fold 144 254 1.8E-6 T 11-10-2018 IPR013656 PAS fold-4 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 Gene3D G3DSA:3.30.450.20 716 832 2.6E-25 T 11-10-2018 Patl_1295 8c18b92177db96e7a2cd46b807ce434e 1223 SUPERFAMILY SSF47384 838 921 8.24E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_1703 3dbeacfe54885246f3d9c53039d834af 197 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 27 193 1.3E-34 T 11-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component Patl_1703 3dbeacfe54885246f3d9c53039d834af 197 SUPERFAMILY SSF159594 25 195 3.14E-14 T 11-10-2018 Patl_2095 d0438b539d30c5ef215b73dfce446041 135 SMART SM00448 12 125 8.3E-4 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2095 d0438b539d30c5ef215b73dfce446041 135 Gene3D G3DSA:3.40.50.2300 6 135 2.5E-41 T 11-10-2018 Patl_2095 d0438b539d30c5ef215b73dfce446041 135 Pfam PF00072 Response regulator receiver domain 14 124 1.2E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2095 d0438b539d30c5ef215b73dfce446041 135 SUPERFAMILY SSF52172 14 130 5.12E-15 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3379 03fd0e0ea1ca7f01a119b5a5850833a4 72 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 20.918 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 Patl_3379 03fd0e0ea1ca7f01a119b5a5850833a4 72 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 2.0E-34 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 Patl_3379 03fd0e0ea1ca7f01a119b5a5850833a4 72 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 2.1E-22 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 Patl_3379 03fd0e0ea1ca7f01a119b5a5850833a4 72 SUPERFAMILY SSF158651 1 71 8.76E-28 T 11-10-2018 IPR023202 YejL-like superfamily Patl_3379 03fd0e0ea1ca7f01a119b5a5850833a4 72 Gene3D G3DSA:1.10.3390.10 1 72 1.3E-28 T 11-10-2018 IPR023202 YejL-like superfamily Patl_3379 03fd0e0ea1ca7f01a119b5a5850833a4 72 PIRSF PIRSF006188 1 72 1.2E-29 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 Patl_2954 00b5ce6a9800048aeab156fa96672f9e 547 Pfam PF02225 PA domain 141 229 4.5E-7 T 11-10-2018 IPR003137 PA domain Patl_2954 00b5ce6a9800048aeab156fa96672f9e 547 Pfam PF04389 Peptidase family M28 305 510 5.0E-47 T 11-10-2018 IPR007484 Peptidase M28 Patl_2954 00b5ce6a9800048aeab156fa96672f9e 547 SUPERFAMILY SSF53187 40 532 4.29E-67 T 11-10-2018 Patl_2954 00b5ce6a9800048aeab156fa96672f9e 547 Gene3D G3DSA:3.40.630.10 34 130 1.5E-5 T 11-10-2018 Patl_2954 00b5ce6a9800048aeab156fa96672f9e 547 Gene3D G3DSA:3.40.630.10 255 535 7.9E-53 T 11-10-2018 Patl_2954 00b5ce6a9800048aeab156fa96672f9e 547 SUPERFAMILY SSF52025 138 221 1.75E-5 T 11-10-2018 Patl_1247 cfbed17f5e8985d1cd7d5a8577b1ef8b 870 SUPERFAMILY SSF55021 796 855 5.41E-6 T 11-10-2018 Patl_1247 cfbed17f5e8985d1cd7d5a8577b1ef8b 870 SUPERFAMILY SSF55021 691 759 9.16E-8 T 11-10-2018 Patl_1247 cfbed17f5e8985d1cd7d5a8577b1ef8b 870 SUPERFAMILY SSF109604 418 569 3.77E-12 T 11-10-2018 Patl_1247 cfbed17f5e8985d1cd7d5a8577b1ef8b 870 PIRSF PIRSF006288 8 870 1.8E-284 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Patl_1247 cfbed17f5e8985d1cd7d5a8577b1ef8b 870 Pfam PF08335 GlnD PII-uridylyltransferase 178 316 2.2E-34 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Patl_1247 cfbed17f5e8985d1cd7d5a8577b1ef8b 870 Gene3D G3DSA:1.10.3210.10 441 568 4.5E-8 T 11-10-2018 Patl_1247 cfbed17f5e8985d1cd7d5a8577b1ef8b 870 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 39 869 9.2E-266 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Patl_1247 cfbed17f5e8985d1cd7d5a8577b1ef8b 870 Pfam PF01909 Nucleotidyltransferase domain 65 116 4.2E-6 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Patl_1247 cfbed17f5e8985d1cd7d5a8577b1ef8b 870 SMART SM00471 448 593 2.5E-6 T 11-10-2018 IPR003607 HD/PDEase domain Patl_1247 cfbed17f5e8985d1cd7d5a8577b1ef8b 870 SUPERFAMILY SSF81593 187 310 1.96E-6 T 11-10-2018 Patl_1247 cfbed17f5e8985d1cd7d5a8577b1ef8b 870 SUPERFAMILY SSF81301 41 166 3.27E-18 T 11-10-2018 Patl_1247 cfbed17f5e8985d1cd7d5a8577b1ef8b 870 Pfam PF01966 HD domain 479 580 2.1E-10 T 11-10-2018 IPR006674 HD domain Patl_1247 cfbed17f5e8985d1cd7d5a8577b1ef8b 870 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 870 277.851 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 Patl_0152 b0edf5f39b8fddb6ef905c68fac61689 445 SUPERFAMILY SSF52425 10 192 6.67E-49 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 Patl_0152 b0edf5f39b8fddb6ef905c68fac61689 445 Gene3D G3DSA:1.25.40.80 140 302 3.1E-51 T 11-10-2018 Patl_0152 b0edf5f39b8fddb6ef905c68fac61689 445 SUPERFAMILY SSF48173 205 427 6.67E-74 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Patl_0152 b0edf5f39b8fddb6ef905c68fac61689 445 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 10 428 4.3E-157 T 11-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 Patl_0152 b0edf5f39b8fddb6ef905c68fac61689 445 Gene3D G3DSA:3.40.50.620 2 132 2.2E-30 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_0152 b0edf5f39b8fddb6ef905c68fac61689 445 Gene3D G3DSA:1.10.579.10 310 430 7.2E-51 T 11-10-2018 Patl_0152 b0edf5f39b8fddb6ef905c68fac61689 445 PRINTS PR00147 DNA photolyase signature 329 345 1.8E-12 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Patl_0152 b0edf5f39b8fddb6ef905c68fac61689 445 PRINTS PR00147 DNA photolyase signature 349 367 1.8E-12 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Patl_0152 b0edf5f39b8fddb6ef905c68fac61689 445 PRINTS PR00147 DNA photolyase signature 388 402 1.8E-12 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Patl_0152 b0edf5f39b8fddb6ef905c68fac61689 445 Pfam PF03441 FAD binding domain of DNA photolyase 282 425 7.5E-43 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 Patl_0152 b0edf5f39b8fddb6ef905c68fac61689 445 Pfam PF00875 DNA photolyase 13 178 2.8E-38 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 Patl_3471 f9400c3f11f87d506297321d8c6060d2 788 Pfam PF00593 TonB dependent receptor 291 785 1.9E-40 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3471 f9400c3f11f87d506297321d8c6060d2 788 Gene3D G3DSA:2.40.170.20 15 786 1.0E-116 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_3471 f9400c3f11f87d506297321d8c6060d2 788 SUPERFAMILY SSF56935 2 786 2.88E-107 T 11-10-2018 Patl_3471 f9400c3f11f87d506297321d8c6060d2 788 Pfam PF07715 TonB-dependent Receptor Plug Domain 23 128 1.9E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1656 ed74a2062195761c73ba6a68c1b21256 185 SUPERFAMILY SSF88946 19 106 2.2E-20 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Patl_1656 ed74a2062195761c73ba6a68c1b21256 185 Gene3D G3DSA:1.10.1740.10 4 88 4.6E-18 T 11-10-2018 Patl_1656 ed74a2062195761c73ba6a68c1b21256 185 SUPERFAMILY SSF88659 113 174 3.05E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_1656 ed74a2062195761c73ba6a68c1b21256 185 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 48 79 - T 11-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_1656 ed74a2062195761c73ba6a68c1b21256 185 Pfam PF08281 Sigma-70, region 4 117 168 5.1E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_1656 ed74a2062195761c73ba6a68c1b21256 185 Pfam PF04542 Sigma-70 region 2 26 92 1.1E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Patl_1656 ed74a2062195761c73ba6a68c1b21256 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 173 1.2E-21 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Patl_1656 ed74a2062195761c73ba6a68c1b21256 185 Gene3D G3DSA:1.10.10.10 112 175 2.6E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3746 7b005344dbd3b67448e54cf678a6c432 135 Gene3D G3DSA:3.30.70.60 2 93 7.9E-32 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Patl_3746 7b005344dbd3b67448e54cf678a6c432 135 TIGRFAM TIGR00166 S6: ribosomal protein bS6 2 94 4.0E-35 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3746 7b005344dbd3b67448e54cf678a6c432 135 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 2 95 22.214 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Patl_3746 7b005344dbd3b67448e54cf678a6c432 135 SUPERFAMILY SSF54995 1 104 1.01E-37 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3746 7b005344dbd3b67448e54cf678a6c432 135 Pfam PF01250 Ribosomal protein S6 4 92 9.1E-27 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1019 eef2c717372ac6c2a7a7f2724e250eda 407 SUPERFAMILY SSF51556 69 365 1.51E-78 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_1019 eef2c717372ac6c2a7a7f2724e250eda 407 Gene3D G3DSA:3.20.20.140 70 367 1.2E-161 T 11-10-2018 Patl_1019 eef2c717372ac6c2a7a7f2724e250eda 407 SUPERFAMILY SSF51338 5 405 5.53E-20 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Patl_1019 eef2c717372ac6c2a7a7f2724e250eda 407 Gene3D G3DSA:2.30.40.10 11 404 1.2E-161 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Patl_1019 eef2c717372ac6c2a7a7f2724e250eda 407 TIGRFAM TIGR01224 hutI: imidazolonepropionase 32 405 2.8E-128 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Patl_1019 eef2c717372ac6c2a7a7f2724e250eda 407 Pfam PF01979 Amidohydrolase family 67 406 5.6E-16 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Patl_1019 eef2c717372ac6c2a7a7f2724e250eda 407 Hamap MF_00372 Imidazolonepropionase [hutI]. 6 407 38.067 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Patl_2388 320353a5f87cad37d7b7cf56a597e947 208 Pfam PF12945 Flagellar protein YcgR 2 92 1.8E-12 T 11-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal Patl_2388 320353a5f87cad37d7b7cf56a597e947 208 SUPERFAMILY SSF141371 103 207 2.55E-19 T 11-10-2018 Patl_2388 320353a5f87cad37d7b7cf56a597e947 208 Gene3D G3DSA:2.40.10.220 102 207 7.2E-11 T 11-10-2018 Patl_2388 320353a5f87cad37d7b7cf56a597e947 208 Pfam PF07238 PilZ domain 101 204 1.6E-11 T 11-10-2018 IPR009875 PilZ domain GO:0035438 Patl_2388 320353a5f87cad37d7b7cf56a597e947 208 SUPERFAMILY SSF141371 1 101 1.92E-24 T 11-10-2018 Patl_2388 320353a5f87cad37d7b7cf56a597e947 208 Gene3D G3DSA:2.30.110.10 1 101 7.2E-15 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 SUPERFAMILY SSF52374 3 652 3.6E-134 T 11-10-2018 Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 Pfam PF06827 Zinc finger found in FPG and IleRS 902 930 1.0E-8 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 933 21.445 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 SUPERFAMILY SSF47323 657 933 2.06E-77 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 Gene3D G3DSA:3.40.50.620 25 634 1.4E-237 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 645 2.1E-210 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 Gene3D G3DSA:1.10.730.20 645 934 5.7E-91 T 11-10-2018 Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 Gene3D G3DSA:3.90.740.10 195 414 1.4E-237 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 SUPERFAMILY SSF50677 204 409 1.57E-56 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 848 7.0E-291 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 532 545 4.2E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 4.2E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 4.2E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 407 422 4.2E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 4.2E-33 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 Pfam PF08264 Anticodon-binding domain of tRNA 690 847 1.0E-26 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Patl_3178 6fd95bb3daad06030585f6eae996ed67 942 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_3579 9fd53af09cc84c4ca732de39907a4aa6 331 PIRSF PIRSF000676 8 328 9.6E-79 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Patl_3579 9fd53af09cc84c4ca732de39907a4aa6 331 Gene3D G3DSA:3.30.230.10 15 186 1.8E-83 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Patl_3579 9fd53af09cc84c4ca732de39907a4aa6 331 SUPERFAMILY SSF55060 191 307 4.6E-28 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Patl_3579 9fd53af09cc84c4ca732de39907a4aa6 331 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 104 115 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 Patl_3579 9fd53af09cc84c4ca732de39907a4aa6 331 TIGRFAM TIGR00191 thrB: homoserine kinase 15 325 3.1E-89 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Patl_3579 9fd53af09cc84c4ca732de39907a4aa6 331 PRINTS PR00958 Homoserine kinase signature 19 34 7.0E-20 T 11-10-2018 Patl_3579 9fd53af09cc84c4ca732de39907a4aa6 331 PRINTS PR00958 Homoserine kinase signature 156 169 7.0E-20 T 11-10-2018 Patl_3579 9fd53af09cc84c4ca732de39907a4aa6 331 PRINTS PR00958 Homoserine kinase signature 273 288 7.0E-20 T 11-10-2018 Patl_3579 9fd53af09cc84c4ca732de39907a4aa6 331 PRINTS PR00958 Homoserine kinase signature 194 211 7.0E-20 T 11-10-2018 Patl_3579 9fd53af09cc84c4ca732de39907a4aa6 331 Pfam PF00288 GHMP kinases N terminal domain 98 169 1.4E-12 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Patl_3579 9fd53af09cc84c4ca732de39907a4aa6 331 SUPERFAMILY SSF54211 11 178 2.28E-28 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_3579 9fd53af09cc84c4ca732de39907a4aa6 331 Pfam PF08544 GHMP kinases C terminal 232 306 4.0E-11 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain Patl_3579 9fd53af09cc84c4ca732de39907a4aa6 331 Gene3D G3DSA:3.30.70.890 187 296 1.8E-83 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Patl_3579 9fd53af09cc84c4ca732de39907a4aa6 331 Hamap MF_00384 Homoserine kinase [thrB]. 14 327 28.003 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Patl_2809 dff6c48479488306c80ac33888e5820c 707 SUPERFAMILY SSF52540 16 241 3.71E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2809 dff6c48479488306c80ac33888e5820c 707 Pfam PF04851 Type III restriction enzyme, res subunit 21 235 3.2E-6 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Patl_2809 dff6c48479488306c80ac33888e5820c 707 SMART SM00491 477 606 3.2E-40 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Patl_2809 dff6c48479488306c80ac33888e5820c 707 SMART SM00488 14 270 0.0061 T 11-10-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 Patl_2809 dff6c48479488306c80ac33888e5820c 707 Gene3D G3DSA:3.40.50.300 21 285 2.6E-50 T 11-10-2018 Patl_2809 dff6c48479488306c80ac33888e5820c 707 SMART SM00487 19 341 0.0013 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_2809 dff6c48479488306c80ac33888e5820c 707 Pfam PF13307 Helicase C-terminal domain 461 618 2.0E-34 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Patl_2809 dff6c48479488306c80ac33888e5820c 707 SUPERFAMILY SSF52540 44 614 2.72E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2809 dff6c48479488306c80ac33888e5820c 707 Gene3D G3DSA:3.40.50.300 444 640 4.1E-37 T 11-10-2018 Patl_2694 bf03643716f956e74693990a0cc9bde0 945 Gene3D G3DSA:2.170.130.10 38 174 2.0E-17 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_2694 bf03643716f956e74693990a0cc9bde0 945 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 41 945 1.4E-188 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor Patl_2694 bf03643716f956e74693990a0cc9bde0 945 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 165 1.0E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_2694 bf03643716f956e74693990a0cc9bde0 945 Pfam PF00593 TonB dependent receptor 418 942 2.4E-32 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_2694 bf03643716f956e74693990a0cc9bde0 945 SUPERFAMILY SSF56935 32 945 7.94E-88 T 11-10-2018 Patl_4168 550066c6ee452aebd0f681a2f0265ddf 307 Gene3D G3DSA:3.40.50.10490 8 225 8.6E-71 T 11-10-2018 Patl_4168 550066c6ee452aebd0f681a2f0265ddf 307 Gene3D G3DSA:1.10.8.1080 226 304 5.4E-31 T 11-10-2018 Patl_4168 550066c6ee452aebd0f681a2f0265ddf 307 SUPERFAMILY SSF53697 14 256 5.78E-68 T 11-10-2018 Patl_4168 550066c6ee452aebd0f681a2f0265ddf 307 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 11-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 Patl_4168 550066c6ee452aebd0f681a2f0265ddf 307 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 41.44 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 Patl_4168 550066c6ee452aebd0f681a2f0265ddf 307 Pfam PF01380 SIS domain 134 215 1.1E-8 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Patl_4168 550066c6ee452aebd0f681a2f0265ddf 307 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 15 303 6.7E-120 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 Patl_0272 ae73bdda35c9f058bf1662635a0e4f61 281 SUPERFAMILY SSF52833 4 111 7.83E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_0272 ae73bdda35c9f058bf1662635a0e4f61 281 Pfam PF00085 Thioredoxin 7 108 2.7E-17 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 Patl_0272 ae73bdda35c9f058bf1662635a0e4f61 281 Pfam PF14559 Tetratricopeptide repeat 125 189 1.8E-16 T 11-10-2018 Patl_0272 ae73bdda35c9f058bf1662635a0e4f61 281 Gene3D G3DSA:1.25.40.10 196 281 6.3E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0272 ae73bdda35c9f058bf1662635a0e4f61 281 SUPERFAMILY SSF48452 110 248 2.25E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0272 ae73bdda35c9f058bf1662635a0e4f61 281 Gene3D G3DSA:3.40.30.10 1 110 4.6E-23 T 11-10-2018 Patl_0272 ae73bdda35c9f058bf1662635a0e4f61 281 Gene3D G3DSA:1.25.40.10 111 195 2.3E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0272 ae73bdda35c9f058bf1662635a0e4f61 281 Pfam PF14561 Tetratricopeptide repeat 194 281 2.3E-21 T 11-10-2018 Patl_3583 c02c54869b1879b7cd1b68f544d23d66 397 Gene3D G3DSA:1.10.287.130 161 239 1.7E-13 T 11-10-2018 Patl_3583 c02c54869b1879b7cd1b68f544d23d66 397 Pfam PF01590 GAF domain 18 151 3.2E-5 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_3583 c02c54869b1879b7cd1b68f544d23d66 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 334 8.7E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3583 c02c54869b1879b7cd1b68f544d23d66 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 371 8.7E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3583 c02c54869b1879b7cd1b68f544d23d66 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 348 8.7E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3583 c02c54869b1879b7cd1b68f544d23d66 397 SMART SM00387 283 392 4.6E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3583 c02c54869b1879b7cd1b68f544d23d66 397 SUPERFAMILY SSF55874 248 389 1.7E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3583 c02c54869b1879b7cd1b68f544d23d66 397 Gene3D G3DSA:3.30.450.40 7 153 9.8E-8 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_3583 c02c54869b1879b7cd1b68f544d23d66 397 Pfam PF00512 His Kinase A (phospho-acceptor) domain 175 235 7.3E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3583 c02c54869b1879b7cd1b68f544d23d66 397 SUPERFAMILY SSF47384 168 236 6.47E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_3583 c02c54869b1879b7cd1b68f544d23d66 397 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 284 388 6.7E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3583 c02c54869b1879b7cd1b68f544d23d66 397 SMART SM00388 173 238 4.7E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3583 c02c54869b1879b7cd1b68f544d23d66 397 SUPERFAMILY SSF55781 17 153 6.67E-15 T 11-10-2018 Patl_3583 c02c54869b1879b7cd1b68f544d23d66 397 Gene3D G3DSA:3.30.565.10 244 389 2.6E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0158 88084551120b9f513324939d3cb19d38 206 SUPERFAMILY SSF52833 47 180 1.98E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_0158 88084551120b9f513324939d3cb19d38 206 Gene3D G3DSA:3.40.30.10 40 197 3.6E-22 T 11-10-2018 Patl_0158 88084551120b9f513324939d3cb19d38 206 Pfam PF00578 AhpC/TSA family 52 163 5.8E-12 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_0089 2a4cae7c90147c1079e0bfd4a5b2b76f 148 Pfam PF00364 Biotin-requiring enzyme 74 147 4.8E-24 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Patl_0089 2a4cae7c90147c1079e0bfd4a5b2b76f 148 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 109 122 2.5E-17 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Patl_0089 2a4cae7c90147c1079e0bfd4a5b2b76f 148 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 94 108 2.5E-17 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Patl_0089 2a4cae7c90147c1079e0bfd4a5b2b76f 148 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 77 90 2.5E-17 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Patl_0089 2a4cae7c90147c1079e0bfd4a5b2b76f 148 SUPERFAMILY SSF51230 73 148 2.22E-24 T 11-10-2018 IPR011053 Single hybrid motif Patl_0089 2a4cae7c90147c1079e0bfd4a5b2b76f 148 Gene3D G3DSA:2.40.50.100 69 148 4.2E-30 T 11-10-2018 Patl_0089 2a4cae7c90147c1079e0bfd4a5b2b76f 148 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 104 121 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Patl_0089 2a4cae7c90147c1079e0bfd4a5b2b76f 148 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 148 1.5E-55 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Patl_3545 b9d1f942cf830bac60f98d07a2003c47 569 SMART SM00052 313 558 3.9E-71 T 11-10-2018 IPR001633 EAL domain Patl_3545 b9d1f942cf830bac60f98d07a2003c47 569 SUPERFAMILY SSF52172 1 135 1.04E-30 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3545 b9d1f942cf830bac60f98d07a2003c47 569 Pfam PF00072 Response regulator receiver domain 3 113 2.7E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3545 b9d1f942cf830bac60f98d07a2003c47 569 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 139 301 6.0E-41 T 11-10-2018 IPR000160 GGDEF domain Patl_3545 b9d1f942cf830bac60f98d07a2003c47 569 Gene3D G3DSA:3.30.70.270 141 315 3.8E-58 T 11-10-2018 Patl_3545 b9d1f942cf830bac60f98d07a2003c47 569 SMART SM00267 129 303 3.5E-52 T 11-10-2018 IPR000160 GGDEF domain Patl_3545 b9d1f942cf830bac60f98d07a2003c47 569 SUPERFAMILY SSF141868 319 563 7.06E-73 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3545 b9d1f942cf830bac60f98d07a2003c47 569 SMART SM00448 1 118 1.0E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3545 b9d1f942cf830bac60f98d07a2003c47 569 SUPERFAMILY SSF55073 147 305 1.96E-48 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3545 b9d1f942cf830bac60f98d07a2003c47 569 Gene3D G3DSA:3.20.20.450 316 568 2.7E-78 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3545 b9d1f942cf830bac60f98d07a2003c47 569 Pfam PF00563 EAL domain 319 553 5.4E-63 T 11-10-2018 IPR001633 EAL domain Patl_3545 b9d1f942cf830bac60f98d07a2003c47 569 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 298 1.5E-45 T 11-10-2018 IPR000160 GGDEF domain Patl_3545 b9d1f942cf830bac60f98d07a2003c47 569 Gene3D G3DSA:3.40.50.2300 1 140 3.2E-31 T 11-10-2018 Patl_1125 c1a8016e2708a5315b751ca054cdd108 358 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 5 143 2.1E-64 T 11-10-2018 Patl_1125 c1a8016e2708a5315b751ca054cdd108 358 Gene3D G3DSA:3.10.180.10 2 154 4.0E-48 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_1125 c1a8016e2708a5315b751ca054cdd108 358 Gene3D G3DSA:3.10.180.10 155 356 1.8E-67 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_1125 c1a8016e2708a5315b751ca054cdd108 358 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 13 355 2.1E-118 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 Patl_1125 c1a8016e2708a5315b751ca054cdd108 358 SUPERFAMILY SSF54593 5 342 5.72E-82 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_1125 c1a8016e2708a5315b751ca054cdd108 358 PIRSF PIRSF009283 1 356 5.7E-111 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 Patl_1125 c1a8016e2708a5315b751ca054cdd108 358 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 160 276 2.6E-18 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Patl_1130 c5851063e196c88bb668e8a089e643ce 350 Pfam PF00155 Aminotransferase class I and II 64 328 3.5E-24 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Patl_1130 c5851063e196c88bb668e8a089e643ce 350 Gene3D G3DSA:3.90.1150.10 258 339 4.9E-42 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_1130 c5851063e196c88bb668e8a089e643ce 350 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 209 222 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Patl_1130 c5851063e196c88bb668e8a089e643ce 350 Gene3D G3DSA:3.40.640.10 41 257 4.9E-42 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_1130 c5851063e196c88bb668e8a089e643ce 350 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 2 341 2.7E-89 T 11-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 Patl_1130 c5851063e196c88bb668e8a089e643ce 350 SUPERFAMILY SSF53383 9 341 1.13E-44 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_1134 f2d96f197df9b9c11b362d2cff4751ee 210 PIRSF PIRSF015617 15 210 1.2E-66 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Patl_1134 f2d96f197df9b9c11b362d2cff4751ee 210 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 38 210 4.3E-69 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Patl_1134 f2d96f197df9b9c11b362d2cff4751ee 210 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 41 210 9.9E-60 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Patl_1134 f2d96f197df9b9c11b362d2cff4751ee 210 Gene3D G3DSA:3.40.50.300 20 210 2.7E-70 T 11-10-2018 Patl_1134 f2d96f197df9b9c11b362d2cff4751ee 210 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 14 35 1.8E-5 T 11-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 Patl_1134 f2d96f197df9b9c11b362d2cff4751ee 210 SUPERFAMILY SSF52540 21 210 3.13E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0208 be4b59b1de4504419947a5976d93bf4b 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 6.3E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_0208 be4b59b1de4504419947a5976d93bf4b 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 6.3E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_0208 be4b59b1de4504419947a5976d93bf4b 199 SUPERFAMILY SSF48498 83 194 5.56E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Patl_0208 be4b59b1de4504419947a5976d93bf4b 199 Gene3D G3DSA:1.10.357.10 75 196 3.1E-10 T 11-10-2018 Patl_0208 be4b59b1de4504419947a5976d93bf4b 199 Gene3D G3DSA:1.10.10.60 2 67 9.4E-25 T 11-10-2018 Patl_0208 be4b59b1de4504419947a5976d93bf4b 199 SUPERFAMILY SSF46689 4 65 3.13E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0208 be4b59b1de4504419947a5976d93bf4b 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 2.2E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_1217 984ed04a8c3ff2d76ac7e433e046787d 232 PIRSF PIRSF028137 1 232 5.1E-79 T 11-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane Patl_2498 49d3d4fefa2f214ae7f9bcf5ad647319 154 Gene3D G3DSA:3.30.110.10 59 154 1.2E-38 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Patl_2498 49d3d4fefa2f214ae7f9bcf5ad647319 154 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 66 151 9.3E-37 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Patl_2498 49d3d4fefa2f214ae7f9bcf5ad647319 154 SUPERFAMILY SSF54364 1 61 7.45E-24 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Patl_2498 49d3d4fefa2f214ae7f9bcf5ad647319 154 ProSitePatterns PS00938 Initiation factor 3 signature. 41 54 - T 11-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 Patl_2498 49d3d4fefa2f214ae7f9bcf5ad647319 154 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 59 2.5E-25 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Patl_2498 49d3d4fefa2f214ae7f9bcf5ad647319 154 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 154 25.64 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Patl_2498 49d3d4fefa2f214ae7f9bcf5ad647319 154 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 154 2.0E-67 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Patl_2498 49d3d4fefa2f214ae7f9bcf5ad647319 154 SUPERFAMILY SSF55200 66 154 4.19E-34 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Patl_2498 49d3d4fefa2f214ae7f9bcf5ad647319 154 Gene3D G3DSA:3.10.20.80 1 58 1.5E-25 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Patl_4307 cb3dfd05fb2acf78a1f1c4b1495dd895 271 Pfam PF01695 IstB-like ATP binding protein 104 226 1.1E-9 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Patl_4307 cb3dfd05fb2acf78a1f1c4b1495dd895 271 SUPERFAMILY SSF52540 62 227 8.02E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4307 cb3dfd05fb2acf78a1f1c4b1495dd895 271 Gene3D G3DSA:3.40.50.300 48 238 2.0E-24 T 11-10-2018 Patl_1432 109d5de97c38626aaf21cd633825b0e8 226 SUPERFAMILY SSF51735 1 214 2.13E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1432 109d5de97c38626aaf21cd633825b0e8 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.6E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1432 109d5de97c38626aaf21cd633825b0e8 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.6E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1432 109d5de97c38626aaf21cd633825b0e8 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.6E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1432 109d5de97c38626aaf21cd633825b0e8 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.6E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1432 109d5de97c38626aaf21cd633825b0e8 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.6E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1432 109d5de97c38626aaf21cd633825b0e8 226 Pfam PF00106 short chain dehydrogenase 5 194 1.1E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1432 109d5de97c38626aaf21cd633825b0e8 226 Gene3D G3DSA:3.40.50.720 1 226 4.7E-59 T 11-10-2018 Patl_1432 109d5de97c38626aaf21cd633825b0e8 226 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_1556 beb682a65c418ff283d0b769f6e3e6a1 390 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 281 371 9.4E-25 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Patl_1556 beb682a65c418ff283d0b769f6e3e6a1 390 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 32 261 6.0E-93 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Patl_1556 beb682a65c418ff283d0b769f6e3e6a1 390 SUPERFAMILY SSF69189 281 373 8.44E-26 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Patl_1556 beb682a65c418ff283d0b769f6e3e6a1 390 SUPERFAMILY SSF56601 6 281 1.13E-84 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Patl_1556 beb682a65c418ff283d0b769f6e3e6a1 390 SMART SM00936 281 371 5.0E-35 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Patl_1556 beb682a65c418ff283d0b769f6e3e6a1 390 Gene3D G3DSA:2.60.410.10 281 371 3.6E-27 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Patl_1556 beb682a65c418ff283d0b769f6e3e6a1 390 Gene3D G3DSA:3.40.710.10 24 280 6.2E-91 T 11-10-2018 Patl_1556 beb682a65c418ff283d0b769f6e3e6a1 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 120 137 1.2E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Patl_1556 beb682a65c418ff283d0b769f6e3e6a1 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 64 75 1.2E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Patl_1556 beb682a65c418ff283d0b769f6e3e6a1 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 147 160 1.2E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Patl_1253 7558e91182d13e43af938a60ff7de8e2 246 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 12 239 9.1E-98 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Patl_1253 7558e91182d13e43af938a60ff7de8e2 246 SUPERFAMILY SSF64005 12 235 1.96E-86 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Patl_1253 7558e91182d13e43af938a60ff7de8e2 246 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 185 202 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Patl_1253 7558e91182d13e43af938a60ff7de8e2 246 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 12 240 39.595 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Patl_1253 7558e91182d13e43af938a60ff7de8e2 246 Gene3D G3DSA:3.40.1180.10 1 240 2.4E-91 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Patl_1253 7558e91182d13e43af938a60ff7de8e2 246 Pfam PF01255 Putative undecaprenyl diphosphate synthase 19 239 3.4E-80 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Patl_1744 999ba48686a86128b5205566bf6f04bd 791 SUPERFAMILY SSF52009 350 464 1.03E-32 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Patl_1744 999ba48686a86128b5205566bf6f04bd 791 Gene3D G3DSA:3.30.1490.20 1 193 5.4E-69 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Patl_1744 999ba48686a86128b5205566bf6f04bd 791 PIRSF PIRSF000854 1 791 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Patl_1744 999ba48686a86128b5205566bf6f04bd 791 SUPERFAMILY SSF51621 466 786 4.85E-97 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Patl_1744 999ba48686a86128b5205566bf6f04bd 791 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 694 712 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Patl_1744 999ba48686a86128b5205566bf6f04bd 791 SUPERFAMILY SSF56059 1 384 6.45E-105 T 11-10-2018 Patl_1744 999ba48686a86128b5205566bf6f04bd 791 Gene3D G3DSA:3.30.470.20 194 357 7.0E-56 T 11-10-2018 Patl_1744 999ba48686a86128b5205566bf6f04bd 791 Gene3D G3DSA:3.50.30.10 359 477 5.5E-40 T 11-10-2018 Patl_1744 999ba48686a86128b5205566bf6f04bd 791 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 414 425 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Patl_1744 999ba48686a86128b5205566bf6f04bd 791 Gene3D G3DSA:3.20.20.60 478 789 2.6E-102 T 11-10-2018 Patl_1744 999ba48686a86128b5205566bf6f04bd 791 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 482 780 6.0E-61 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Patl_1744 999ba48686a86128b5205566bf6f04bd 791 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 341 6.9E-114 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Patl_1744 999ba48686a86128b5205566bf6f04bd 791 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 787 0.0 T 11-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 Patl_1744 999ba48686a86128b5205566bf6f04bd 791 Pfam PF00391 PEP-utilising enzyme, mobile domain 384 455 2.0E-26 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Patl_2379 d07baeb5aa59f0a41f0d3d59ec9b925f 396 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 37 391 5.4E-148 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Patl_2379 d07baeb5aa59f0a41f0d3d59ec9b925f 396 SUPERFAMILY SSF52402 35 275 1.35E-54 T 11-10-2018 Patl_2379 d07baeb5aa59f0a41f0d3d59ec9b925f 396 Gene3D G3DSA:3.40.50.620 23 243 1.4E-93 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_2379 d07baeb5aa59f0a41f0d3d59ec9b925f 396 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 37 392 39.786 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Patl_2379 d07baeb5aa59f0a41f0d3d59ec9b925f 396 Gene3D G3DSA:2.40.30.10 313 395 8.1E-32 T 11-10-2018 Patl_2379 d07baeb5aa59f0a41f0d3d59ec9b925f 396 Gene3D G3DSA:2.30.30.280 244 312 7.3E-26 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Patl_2379 d07baeb5aa59f0a41f0d3d59ec9b925f 396 Pfam PF03054 tRNA methyl transferase 37 391 6.9E-139 T 11-10-2018 Patl_2080 1e789a5951e73f2430bccf5582b73648 366 SUPERFAMILY SSF103088 226 355 2.88E-29 T 11-10-2018 IPR036737 OmpA-like domain superfamily Patl_2080 1e789a5951e73f2430bccf5582b73648 366 Gene3D G3DSA:3.30.1330.60 223 363 4.3E-30 T 11-10-2018 IPR036737 OmpA-like domain superfamily Patl_2080 1e789a5951e73f2430bccf5582b73648 366 PRINTS PR01021 OMPA domain signature 300 316 1.8E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Patl_2080 1e789a5951e73f2430bccf5582b73648 366 PRINTS PR01021 OMPA domain signature 255 277 1.8E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Patl_2080 1e789a5951e73f2430bccf5582b73648 366 PRINTS PR01021 OMPA domain signature 285 300 1.8E-8 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Patl_2080 1e789a5951e73f2430bccf5582b73648 366 Pfam PF00691 OmpA family 254 350 6.3E-19 T 11-10-2018 IPR006665 OmpA-like domain Patl_2080 1e789a5951e73f2430bccf5582b73648 366 SUPERFAMILY SSF56925 36 169 2.51E-7 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Patl_2080 1e789a5951e73f2430bccf5582b73648 366 SUPERFAMILY SSF103647 174 242 4.45E-17 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 Patl_2080 1e789a5951e73f2430bccf5582b73648 366 Gene3D G3DSA:2.40.160.20 17 168 8.3E-15 T 11-10-2018 Patl_2080 1e789a5951e73f2430bccf5582b73648 366 Pfam PF02412 Thrombospondin type 3 repeat 178 196 0.0023 T 11-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 Patl_2080 1e789a5951e73f2430bccf5582b73648 366 Pfam PF05736 OprF membrane domain 3 170 5.4E-6 T 11-10-2018 IPR008722 Outer membrane porin F, N-terminal Patl_1569 7b03f4e74588482d5d8f44969a06b16a 119 SMART SM01103 24 107 1.2E-39 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Patl_1569 7b03f4e74588482d5d8f44969a06b16a 119 Pfam PF01985 CRS1 / YhbY (CRM) domain 24 107 3.2E-19 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Patl_1569 7b03f4e74588482d5d8f44969a06b16a 119 SUPERFAMILY SSF75471 22 116 4.45E-29 T 11-10-2018 IPR035920 YhbY-like superfamily Patl_1569 7b03f4e74588482d5d8f44969a06b16a 119 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 24 118 2.0E-35 T 11-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 Patl_1569 7b03f4e74588482d5d8f44969a06b16a 119 Gene3D G3DSA:3.30.110.60 22 119 1.0E-34 T 11-10-2018 IPR035920 YhbY-like superfamily Patl_1569 7b03f4e74588482d5d8f44969a06b16a 119 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 30 119 8.0E-46 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 Patl_2122 ce30ca973e2541268a9745a18856d8ae 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 8.3E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2122 ce30ca973e2541268a9745a18856d8ae 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 8.3E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2122 ce30ca973e2541268a9745a18856d8ae 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.3E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2122 ce30ca973e2541268a9745a18856d8ae 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_2122 ce30ca973e2541268a9745a18856d8ae 245 SUPERFAMILY SSF51735 5 244 4.08E-85 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2122 ce30ca973e2541268a9745a18856d8ae 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 2.8E-101 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Patl_2122 ce30ca973e2541268a9745a18856d8ae 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 3.2E-66 T 11-10-2018 Patl_2122 ce30ca973e2541268a9745a18856d8ae 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 1.5E-4 T 11-10-2018 Patl_2122 ce30ca973e2541268a9745a18856d8ae 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 8.2E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2122 ce30ca973e2541268a9745a18856d8ae 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 8.2E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2122 ce30ca973e2541268a9745a18856d8ae 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.2E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2122 ce30ca973e2541268a9745a18856d8ae 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 8.2E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2122 ce30ca973e2541268a9745a18856d8ae 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 8.2E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2122 ce30ca973e2541268a9745a18856d8ae 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.2E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2122 ce30ca973e2541268a9745a18856d8ae 245 Gene3D G3DSA:3.40.50.720 1 244 2.3E-86 T 11-10-2018 Patl_0115 f53f665534b59b24f4c60c133345b6d6 368 Pfam PF03601 Conserved hypothetical protein 698 31 346 3.6E-97 T 11-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 Patl_0115 f53f665534b59b24f4c60c133345b6d6 368 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 31 366 3.2E-103 T 11-10-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 Patl_1663 eaa23f48a857b3f139bfce89c99f313f 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 1.5E-247 T 11-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 Patl_1663 eaa23f48a857b3f139bfce89c99f313f 436 Gene3D G3DSA:3.40.47.10 6 435 3.4E-106 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_1663 eaa23f48a857b3f139bfce89c99f313f 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 66.96 T 11-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 Patl_1663 eaa23f48a857b3f139bfce89c99f313f 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 Patl_1663 eaa23f48a857b3f139bfce89c99f313f 436 SUPERFAMILY SSF53901 15 294 2.76E-54 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_1663 eaa23f48a857b3f139bfce89c99f313f 436 SUPERFAMILY SSF53901 296 434 6.24E-31 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_1663 eaa23f48a857b3f139bfce89c99f313f 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 7.5E-123 T 11-10-2018 IPR002155 Thiolase GO:0016747 Patl_1663 eaa23f48a857b3f139bfce89c99f313f 436 Pfam PF02803 Thiolase, C-terminal domain 295 434 7.3E-36 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Patl_1663 eaa23f48a857b3f139bfce89c99f313f 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 2.5E-58 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Patl_1663 eaa23f48a857b3f139bfce89c99f313f 436 PIRSF PIRSF000429 9 436 2.6E-112 T 11-10-2018 IPR002155 Thiolase GO:0016747 Patl_1154 6fc15db029f84e5bd447114b44714d12 143 SUPERFAMILY SSF53098 8 140 1.24E-39 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_1154 6fc15db029f84e5bd447114b44714d12 143 SMART SM00732 7 107 1.0E-30 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Patl_1154 6fc15db029f84e5bd447114b44714d12 143 Gene3D G3DSA:3.30.420.140 5 142 4.2E-40 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Patl_1154 6fc15db029f84e5bd447114b44714d12 143 Pfam PF03652 Holliday junction resolvase 8 139 4.0E-38 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Patl_1154 6fc15db029f84e5bd447114b44714d12 143 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 10 139 1.2E-47 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Patl_1154 6fc15db029f84e5bd447114b44714d12 143 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 7 142 23.672 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Patl_0748 1bb0b6cafce54730d32201ad02bfd548 400 Gene3D G3DSA:3.40.50.720 5 388 2.0E-146 T 11-10-2018 Patl_0748 1bb0b6cafce54730d32201ad02bfd548 400 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 135 7.8E-31 T 11-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 Patl_0748 1bb0b6cafce54730d32201ad02bfd548 400 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 139 386 3.5E-37 T 11-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 Patl_0748 1bb0b6cafce54730d32201ad02bfd548 400 SUPERFAMILY SSF51735 1 189 1.48E-18 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0748 1bb0b6cafce54730d32201ad02bfd548 400 Gene3D G3DSA:3.30.360.10 149 345 2.0E-146 T 11-10-2018 Patl_2419 3d0ec3d24c482e2396e6385e6f2d6e01 488 ProSitePatterns PS00216 Sugar transport proteins signature 1. 349 366 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Patl_2419 3d0ec3d24c482e2396e6385e6f2d6e01 488 Gene3D G3DSA:1.20.1250.20 287 477 1.8E-37 T 11-10-2018 Patl_2419 3d0ec3d24c482e2396e6385e6f2d6e01 488 Pfam PF07690 Major Facilitator Superfamily 22 435 2.2E-32 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_2419 3d0ec3d24c482e2396e6385e6f2d6e01 488 SUPERFAMILY SSF103473 13 471 1.44E-56 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_2419 3d0ec3d24c482e2396e6385e6f2d6e01 488 Gene3D G3DSA:1.20.1250.20 10 192 8.0E-41 T 11-10-2018 Patl_2419 3d0ec3d24c482e2396e6385e6f2d6e01 488 TIGRFAM TIGR00886 2A0108: nitrite transporter 16 433 1.4E-98 T 11-10-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 Patl_0651 f6bf38db7daf54be67c52468b59d6f60 401 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 12 395 2.8E-146 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Patl_0651 f6bf38db7daf54be67c52468b59d6f60 401 Gene3D G3DSA:3.40.640.10 55 300 3.0E-146 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_0651 f6bf38db7daf54be67c52468b59d6f60 401 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 3 399 1.5E-213 T 11-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 Patl_0651 f6bf38db7daf54be67c52468b59d6f60 401 SUPERFAMILY SSF53383 11 395 1.61E-123 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_0651 f6bf38db7daf54be67c52468b59d6f60 401 Gene3D G3DSA:3.90.1150.10 20 388 3.0E-146 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_0651 f6bf38db7daf54be67c52468b59d6f60 401 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 69.504 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Patl_0651 f6bf38db7daf54be67c52468b59d6f60 401 PIRSF PIRSF000521 164 398 6.7E-36 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Patl_0651 f6bf38db7daf54be67c52468b59d6f60 401 PIRSF PIRSF000521 24 152 2.2E-6 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Patl_0651 f6bf38db7daf54be67c52468b59d6f60 401 Pfam PF00202 Aminotransferase class-III 16 395 1.2E-124 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Patl_0651 f6bf38db7daf54be67c52468b59d6f60 401 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 218 255 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Patl_1446 aa2478b636933fe5ee961a0758bf508f 308 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 287 1.1E-65 T 11-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 Patl_4030 df9739da67922d6d86e175078720bcb0 365 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 298 327 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site Patl_4030 df9739da67922d6d86e175078720bcb0 365 SUPERFAMILY SSF53335 9 364 1.73E-55 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_4030 df9739da67922d6d86e175078720bcb0 365 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 347 357 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site Patl_4030 df9739da67922d6d86e175078720bcb0 365 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 365 43.453 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 Patl_4030 df9739da67922d6d86e175078720bcb0 365 Gene3D G3DSA:3.40.50.150 13 360 9.3E-135 T 11-10-2018 Patl_4030 df9739da67922d6d86e175078720bcb0 365 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 365 4.4E-166 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 Patl_4030 df9739da67922d6d86e175078720bcb0 365 Gene3D G3DSA:3.40.1350.30 45 188 9.3E-135 T 11-10-2018 Patl_4030 df9739da67922d6d86e175078720bcb0 365 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 365 2.7E-167 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Patl_2100 3d403f31194cbdb96e8c6aaccd433c5b 320 PRINTS PR00625 DnaJ domain signature 41 61 1.7E-24 T 11-10-2018 IPR001623 DnaJ domain Patl_2100 3d403f31194cbdb96e8c6aaccd433c5b 320 PRINTS PR00625 DnaJ domain signature 61 80 1.7E-24 T 11-10-2018 IPR001623 DnaJ domain Patl_2100 3d403f31194cbdb96e8c6aaccd433c5b 320 PRINTS PR00625 DnaJ domain signature 25 40 1.7E-24 T 11-10-2018 IPR001623 DnaJ domain Patl_2100 3d403f31194cbdb96e8c6aaccd433c5b 320 PRINTS PR00625 DnaJ domain signature 7 25 1.7E-24 T 11-10-2018 IPR001623 DnaJ domain Patl_2100 3d403f31194cbdb96e8c6aaccd433c5b 320 Gene3D G3DSA:1.10.287.110 2 120 5.9E-34 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Patl_2100 3d403f31194cbdb96e8c6aaccd433c5b 320 SMART SM00271 4 61 3.9E-27 T 11-10-2018 IPR001623 DnaJ domain Patl_2100 3d403f31194cbdb96e8c6aaccd433c5b 320 Gene3D G3DSA:1.20.5.460 293 320 4.2E-6 T 11-10-2018 Patl_2100 3d403f31194cbdb96e8c6aaccd433c5b 320 Gene3D G3DSA:2.60.260.20 135 214 5.5E-18 T 11-10-2018 Patl_2100 3d403f31194cbdb96e8c6aaccd433c5b 320 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 11-10-2018 IPR018253 DnaJ domain, conserved site Patl_2100 3d403f31194cbdb96e8c6aaccd433c5b 320 SUPERFAMILY SSF46565 1 88 8.11E-31 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Patl_2100 3d403f31194cbdb96e8c6aaccd433c5b 320 Pfam PF00226 DnaJ domain 5 66 2.0E-25 T 11-10-2018 IPR001623 DnaJ domain Patl_2100 3d403f31194cbdb96e8c6aaccd433c5b 320 SUPERFAMILY SSF49493 133 222 7.06E-15 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Patl_2100 3d403f31194cbdb96e8c6aaccd433c5b 320 Pfam PF01556 DnaJ C terminal domain 140 293 4.3E-36 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal Patl_2100 3d403f31194cbdb96e8c6aaccd433c5b 320 SUPERFAMILY SSF49493 221 298 3.27E-17 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Patl_2100 3d403f31194cbdb96e8c6aaccd433c5b 320 Gene3D G3DSA:2.60.260.20 216 292 3.7E-29 T 11-10-2018 Patl_2330 21019912e321101fb8cfb484da94f77a 426 Pfam PF00270 DEAD/DEAH box helicase 25 195 4.0E-51 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Patl_2330 21019912e321101fb8cfb484da94f77a 426 SMART SM00487 20 222 3.6E-56 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_2330 21019912e321101fb8cfb484da94f77a 426 SUPERFAMILY SSF52540 25 100 3.19E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2330 21019912e321101fb8cfb484da94f77a 426 SMART SM00490 258 339 2.7E-29 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_2330 21019912e321101fb8cfb484da94f77a 426 SUPERFAMILY SSF52540 75 360 1.11E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2330 21019912e321101fb8cfb484da94f77a 426 Gene3D G3DSA:3.40.50.300 215 426 6.6E-50 T 11-10-2018 Patl_2330 21019912e321101fb8cfb484da94f77a 426 Gene3D G3DSA:3.40.50.300 1 209 6.2E-75 T 11-10-2018 Patl_2330 21019912e321101fb8cfb484da94f77a 426 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Patl_2330 21019912e321101fb8cfb484da94f77a 426 Pfam PF00271 Helicase conserved C-terminal domain 230 339 2.7E-27 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_0074 6bde97d6287e8267cec022a0039ab0b1 275 PRINTS PR00412 Epoxide hydrolase signature 93 106 2.3E-10 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_0074 6bde97d6287e8267cec022a0039ab0b1 275 PRINTS PR00412 Epoxide hydrolase signature 107 120 2.3E-10 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_0074 6bde97d6287e8267cec022a0039ab0b1 275 PRINTS PR00412 Epoxide hydrolase signature 29 47 2.3E-10 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_0074 6bde97d6287e8267cec022a0039ab0b1 275 PRINTS PR00412 Epoxide hydrolase signature 246 268 2.3E-10 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_0074 6bde97d6287e8267cec022a0039ab0b1 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 5.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_0074 6bde97d6287e8267cec022a0039ab0b1 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 5.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_0074 6bde97d6287e8267cec022a0039ab0b1 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 215 229 5.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_0074 6bde97d6287e8267cec022a0039ab0b1 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 5.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_0074 6bde97d6287e8267cec022a0039ab0b1 275 Pfam PF08386 TAP-like protein 203 273 1.1E-4 T 11-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal Patl_0074 6bde97d6287e8267cec022a0039ab0b1 275 Pfam PF00561 alpha/beta hydrolase fold 24 126 7.1E-21 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_0074 6bde97d6287e8267cec022a0039ab0b1 275 SUPERFAMILY SSF53474 3 271 3.52E-68 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0074 6bde97d6287e8267cec022a0039ab0b1 275 Gene3D G3DSA:3.40.50.1820 1 275 8.8E-70 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1249 7af1f458080a34beb2e78c9b30a74849 243 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Patl_1249 7af1f458080a34beb2e78c9b30a74849 243 Gene3D G3DSA:1.10.287.610 103 150 2.1E-94 T 11-10-2018 Patl_1249 7af1f458080a34beb2e78c9b30a74849 243 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 42.208 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1249 7af1f458080a34beb2e78c9b30a74849 243 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 4.1E-110 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1249 7af1f458080a34beb2e78c9b30a74849 243 SUPERFAMILY SSF52313 6 232 1.31E-98 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Patl_1249 7af1f458080a34beb2e78c9b30a74849 243 Pfam PF00318 Ribosomal protein S2 9 224 2.1E-95 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1249 7af1f458080a34beb2e78c9b30a74849 243 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Patl_1249 7af1f458080a34beb2e78c9b30a74849 243 Gene3D G3DSA:3.40.50.10490 8 219 2.1E-94 T 11-10-2018 Patl_1249 7af1f458080a34beb2e78c9b30a74849 243 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.3E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1249 7af1f458080a34beb2e78c9b30a74849 243 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.3E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1249 7af1f458080a34beb2e78c9b30a74849 243 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.3E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1249 7af1f458080a34beb2e78c9b30a74849 243 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.3E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1249 7af1f458080a34beb2e78c9b30a74849 243 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.3E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1249 7af1f458080a34beb2e78c9b30a74849 243 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.3E-38 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1593 628387b5b27cc3100c56c93cf18c7bab 101 SUPERFAMILY SSF52091 7 100 9.42E-17 T 11-10-2018 IPR036513 STAS domain superfamily Patl_1593 628387b5b27cc3100c56c93cf18c7bab 101 Gene3D G3DSA:3.30.750.24 5 101 2.9E-16 T 11-10-2018 IPR036513 STAS domain superfamily Patl_1593 628387b5b27cc3100c56c93cf18c7bab 101 Pfam PF01740 STAS domain 19 98 2.0E-8 T 11-10-2018 IPR002645 STAS domain Patl_0527 fe4d0480a2029778fdb5c96601225427 608 SUPERFAMILY SSF141868 357 606 1.96E-74 T 11-10-2018 IPR035919 EAL domain superfamily Patl_0527 fe4d0480a2029778fdb5c96601225427 608 SUPERFAMILY SSF55073 173 343 3.06E-40 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_0527 fe4d0480a2029778fdb5c96601225427 608 Pfam PF00563 EAL domain 358 594 2.3E-56 T 11-10-2018 IPR001633 EAL domain Patl_0527 fe4d0480a2029778fdb5c96601225427 608 SMART SM00267 157 342 1.3E-50 T 11-10-2018 IPR000160 GGDEF domain Patl_0527 fe4d0480a2029778fdb5c96601225427 608 Gene3D G3DSA:3.20.20.450 355 608 1.1E-79 T 11-10-2018 IPR035919 EAL domain superfamily Patl_0527 fe4d0480a2029778fdb5c96601225427 608 Gene3D G3DSA:3.30.70.270 162 354 8.7E-50 T 11-10-2018 Patl_0527 fe4d0480a2029778fdb5c96601225427 608 Pfam PF00990 Diguanylate cyclase, GGDEF domain 169 337 9.4E-43 T 11-10-2018 IPR000160 GGDEF domain Patl_0527 fe4d0480a2029778fdb5c96601225427 608 SMART SM00052 352 599 6.6E-84 T 11-10-2018 IPR001633 EAL domain Patl_0527 fe4d0480a2029778fdb5c96601225427 608 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 165 339 5.4E-37 T 11-10-2018 IPR000160 GGDEF domain Patl_3902 65cbb0a693c5d550923909ab8de31981 312 Gene3D G3DSA:3.60.15.10 35 312 1.1E-61 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_3902 65cbb0a693c5d550923909ab8de31981 312 Pfam PF12706 Beta-lactamase superfamily domain 65 281 1.2E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_3902 65cbb0a693c5d550923909ab8de31981 312 SUPERFAMILY SSF56281 36 311 1.23E-51 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_3902 65cbb0a693c5d550923909ab8de31981 312 SMART SM00849 52 254 7.9E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_3633 b14013bd015aa47b7ff0702d51aae5b9 359 SUPERFAMILY SSF55347 146 327 1.8E-30 T 11-10-2018 Patl_3633 b14013bd015aa47b7ff0702d51aae5b9 359 Gene3D G3DSA:3.30.360.10 140 358 6.1E-44 T 11-10-2018 Patl_3633 b14013bd015aa47b7ff0702d51aae5b9 359 SUPERFAMILY SSF51735 16 173 2.67E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3633 b14013bd015aa47b7ff0702d51aae5b9 359 Gene3D G3DSA:3.40.50.720 18 139 4.3E-40 T 11-10-2018 Patl_3633 b14013bd015aa47b7ff0702d51aae5b9 359 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 22 140 4.3E-29 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Patl_1619 ed57f47e37e877d83bb6788b00ce9c2a 218 Pfam PF01144 Coenzyme A transferase 7 200 1.1E-41 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Patl_1619 ed57f47e37e877d83bb6788b00ce9c2a 218 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 4 208 1.3E-97 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 Patl_1619 ed57f47e37e877d83bb6788b00ce9c2a 218 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 11-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 Patl_1619 ed57f47e37e877d83bb6788b00ce9c2a 218 Gene3D G3DSA:3.40.1080.10 1 213 9.5E-97 T 11-10-2018 Patl_1619 ed57f47e37e877d83bb6788b00ce9c2a 218 SMART SM00882 6 202 5.8E-71 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Patl_1619 ed57f47e37e877d83bb6788b00ce9c2a 218 SUPERFAMILY SSF100950 5 217 1.48E-72 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Patl_1802 9d69655b70c192608e39d74f9246cd3b 290 Pfam PF00549 CoA-ligase 151 270 2.7E-20 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Patl_1802 9d69655b70c192608e39d74f9246cd3b 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 8.9E-148 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Patl_1802 9d69655b70c192608e39d74f9246cd3b 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.59 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Patl_1802 9d69655b70c192608e39d74f9246cd3b 290 SUPERFAMILY SSF52210 123 284 2.49E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Patl_1802 9d69655b70c192608e39d74f9246cd3b 290 Gene3D G3DSA:3.40.50.720 1 123 4.2E-52 T 11-10-2018 Patl_1802 9d69655b70c192608e39d74f9246cd3b 290 PIRSF PIRSF001553 1 289 2.1E-135 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Patl_1802 9d69655b70c192608e39d74f9246cd3b 290 Pfam PF02629 CoA binding domain 6 99 4.2E-32 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Patl_1802 9d69655b70c192608e39d74f9246cd3b 290 SMART SM00881 4 100 1.1E-36 T 11-10-2018 IPR003781 CoA-binding GO:0048037 Patl_1802 9d69655b70c192608e39d74f9246cd3b 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.8E-40 T 11-10-2018 Patl_1802 9d69655b70c192608e39d74f9246cd3b 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.8E-40 T 11-10-2018 Patl_1802 9d69655b70c192608e39d74f9246cd3b 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.8E-40 T 11-10-2018 Patl_1802 9d69655b70c192608e39d74f9246cd3b 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.8E-40 T 11-10-2018 Patl_1802 9d69655b70c192608e39d74f9246cd3b 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Patl_1802 9d69655b70c192608e39d74f9246cd3b 290 Gene3D G3DSA:3.40.50.261 124 288 3.8E-76 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Patl_1802 9d69655b70c192608e39d74f9246cd3b 290 SUPERFAMILY SSF51735 1 122 2.89E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1802 9d69655b70c192608e39d74f9246cd3b 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Patl_0266 b75f59ac25d15ebd89df3721daa401d2 427 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 6.3E-183 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Patl_0266 b75f59ac25d15ebd89df3721daa401d2 427 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.722 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Patl_0266 b75f59ac25d15ebd89df3721daa401d2 427 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 3.0E-30 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Patl_0266 b75f59ac25d15ebd89df3721daa401d2 427 SMART SM01209 103 296 3.4E-140 T 11-10-2018 Patl_0266 b75f59ac25d15ebd89df3721daa401d2 427 SUPERFAMILY SSF51246 329 424 3.03E-32 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Patl_0266 b75f59ac25d15ebd89df3721daa401d2 427 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 1.3E-83 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Patl_0266 b75f59ac25d15ebd89df3721daa401d2 427 Gene3D G3DSA:3.30.470.20 191 329 1.3E-58 T 11-10-2018 Patl_0266 b75f59ac25d15ebd89df3721daa401d2 427 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Patl_0266 b75f59ac25d15ebd89df3721daa401d2 427 Gene3D G3DSA:3.30.1490.20 121 190 1.7E-28 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Patl_0266 b75f59ac25d15ebd89df3721daa401d2 427 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 2.0E-34 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Patl_0266 b75f59ac25d15ebd89df3721daa401d2 427 Gene3D G3DSA:3.40.50.20 2 95 1.8E-36 T 11-10-2018 Patl_0266 b75f59ac25d15ebd89df3721daa401d2 427 SUPERFAMILY SSF56059 104 321 1.01E-66 T 11-10-2018 Patl_0266 b75f59ac25d15ebd89df3721daa401d2 427 SMART SM01210 330 423 1.3E-54 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Patl_0266 b75f59ac25d15ebd89df3721daa401d2 427 Gene3D G3DSA:3.90.600.10 330 427 8.8E-35 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Patl_0266 b75f59ac25d15ebd89df3721daa401d2 427 SUPERFAMILY SSF52440 1 103 5.9E-36 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Patl_1898 9d0034b7963d0c81428d7d2413d7a8d4 354 Gene3D G3DSA:3.40.50.300 84 332 4.4E-81 T 11-10-2018 Patl_1898 9d0034b7963d0c81428d7d2413d7a8d4 354 SUPERFAMILY SSF52540 85 322 3.59E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1898 9d0034b7963d0c81428d7d2413d7a8d4 354 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 Patl_1898 9d0034b7963d0c81428d7d2413d7a8d4 354 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 93 337 3.7E-99 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Patl_1898 9d0034b7963d0c81428d7d2413d7a8d4 354 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 342 36.157 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Patl_2256 81256032efa71ecc4710ef4062fc2c8b 301 SUPERFAMILY SSF46689 248 295 2.2E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_2256 81256032efa71ecc4710ef4062fc2c8b 301 Pfam PF12833 Helix-turn-helix domain 218 293 3.6E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_2256 81256032efa71ecc4710ef4062fc2c8b 301 SMART SM00342 212 295 8.6E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_2256 81256032efa71ecc4710ef4062fc2c8b 301 Pfam PF06719 AraC-type transcriptional regulator N-terminus 22 183 6.9E-45 T 11-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal Patl_2256 81256032efa71ecc4710ef4062fc2c8b 301 SUPERFAMILY SSF46689 197 245 2.92E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_2256 81256032efa71ecc4710ef4062fc2c8b 301 Gene3D G3DSA:1.10.10.60 196 299 3.4E-24 T 11-10-2018 Patl_1923 73d029d09e8e137472e95031a7ae32e5 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 69 2.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_1923 73d029d09e8e137472e95031a7ae32e5 223 SUPERFAMILY SSF46689 14 78 1.08E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1923 73d029d09e8e137472e95031a7ae32e5 223 Gene3D G3DSA:1.10.357.10 11 207 9.8E-15 T 11-10-2018 Patl_1923 73d029d09e8e137472e95031a7ae32e5 223 ProSitePatterns PS00356 LacI-type HTH domain signature. 42 60 - T 11-10-2018 Patl_3130 93a2e38fa5d6b9b28192f2c290379150 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.7E-40 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Patl_3130 93a2e38fa5d6b9b28192f2c290379150 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.7E-40 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Patl_3130 93a2e38fa5d6b9b28192f2c290379150 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.7E-40 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Patl_3130 93a2e38fa5d6b9b28192f2c290379150 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.7E-40 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Patl_3130 93a2e38fa5d6b9b28192f2c290379150 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.7E-40 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Patl_3130 93a2e38fa5d6b9b28192f2c290379150 143 Gene3D G3DSA:3.30.70.141 1 143 1.3E-58 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Patl_3130 93a2e38fa5d6b9b28192f2c290379150 143 SMART SM00562 3 140 5.7E-90 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Patl_3130 93a2e38fa5d6b9b28192f2c290379150 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.328 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Patl_3130 93a2e38fa5d6b9b28192f2c290379150 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Patl_3130 93a2e38fa5d6b9b28192f2c290379150 143 SUPERFAMILY SSF54919 1 141 1.31E-60 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Patl_3130 93a2e38fa5d6b9b28192f2c290379150 143 Pfam PF00334 Nucleoside diphosphate kinase 4 138 6.2E-57 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Patl_3576 1e0cfec11f228ec829ff6340b2510f33 484 Pfam PF00990 Diguanylate cyclase, GGDEF domain 319 471 3.0E-40 T 11-10-2018 IPR000160 GGDEF domain Patl_3576 1e0cfec11f228ec829ff6340b2510f33 484 Gene3D G3DSA:3.30.70.270 305 475 7.6E-51 T 11-10-2018 Patl_3576 1e0cfec11f228ec829ff6340b2510f33 484 Pfam PF05231 MASE1 18 277 1.4E-10 T 11-10-2018 IPR007895 MASE1 Patl_3576 1e0cfec11f228ec829ff6340b2510f33 484 SMART SM00267 307 475 4.6E-52 T 11-10-2018 IPR000160 GGDEF domain Patl_3576 1e0cfec11f228ec829ff6340b2510f33 484 SUPERFAMILY SSF55073 323 473 3.14E-42 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3576 1e0cfec11f228ec829ff6340b2510f33 484 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 315 474 6.2E-43 T 11-10-2018 IPR000160 GGDEF domain Patl_0331 208ed6cb0cdcde1578916c88df743d0f 461 SUPERFAMILY SSF63829 217 442 6.54E-6 T 11-10-2018 Patl_0331 208ed6cb0cdcde1578916c88df743d0f 461 Pfam PF05787 Bacterial protein of unknown function (DUF839) 38 446 1.5E-64 T 11-10-2018 IPR008557 Protein of unknown function DUF839 Patl_2933 6617e339b387e871fa2245f393825ba4 279 Pfam PF12697 Alpha/beta hydrolase family 11 255 6.1E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_2933 6617e339b387e871fa2245f393825ba4 279 Gene3D G3DSA:3.40.50.1820 1 266 8.2E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2933 6617e339b387e871fa2245f393825ba4 279 SUPERFAMILY SSF53474 7 261 1.77E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3055 78e5c8fdfb98419e65e3e338ffcf0d9e 259 Pfam PF04989 Cephalosporin hydroxylase 39 258 1.3E-101 T 11-10-2018 IPR007072 Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase GO:0008168|GO:0008610 Patl_3055 78e5c8fdfb98419e65e3e338ffcf0d9e 259 SUPERFAMILY SSF53335 36 257 4.98E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3055 78e5c8fdfb98419e65e3e338ffcf0d9e 259 Gene3D G3DSA:3.40.50.150 53 248 3.4E-36 T 11-10-2018 Patl_1106 cc6ad813728b075de76f67373349c5c1 424 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 28 356 9.0E-78 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 Patl_1106 cc6ad813728b075de76f67373349c5c1 424 Gene3D G3DSA:3.30.1360.180 240 353 1.7E-119 T 11-10-2018 Patl_1106 cc6ad813728b075de76f67373349c5c1 424 SUPERFAMILY SSF53649 18 396 1.83E-83 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_1106 cc6ad813728b075de76f67373349c5c1 424 Gene3D G3DSA:3.40.720.10 29 405 1.7E-119 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_2473 ebc0f3030da075d09b075de8ab35f664 771 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 6.2E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Patl_2473 ebc0f3030da075d09b075de8ab35f664 771 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 6.2E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Patl_2473 ebc0f3030da075d09b075de8ab35f664 771 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 6.2E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Patl_2473 ebc0f3030da075d09b075de8ab35f664 771 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 6.2E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Patl_2473 ebc0f3030da075d09b075de8ab35f664 771 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 6.2E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Patl_2473 ebc0f3030da075d09b075de8ab35f664 771 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 6.2E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Patl_2473 ebc0f3030da075d09b075de8ab35f664 771 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 1.8E-13 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Patl_2473 ebc0f3030da075d09b075de8ab35f664 771 Pfam PF03477 ATP cone domain 6 92 1.8E-16 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Patl_2473 ebc0f3030da075d09b075de8ab35f664 771 Gene3D G3DSA:3.20.70.20 78 741 3.0E-157 T 11-10-2018 Patl_2473 ebc0f3030da075d09b075de8ab35f664 771 SUPERFAMILY SSF51998 222 741 1.22E-167 T 11-10-2018 Patl_2473 ebc0f3030da075d09b075de8ab35f664 771 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Patl_2473 ebc0f3030da075d09b075de8ab35f664 771 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 2.1E-119 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Patl_2473 ebc0f3030da075d09b075de8ab35f664 771 SUPERFAMILY SSF48168 10 221 3.01E-72 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Patl_2473 ebc0f3030da075d09b075de8ab35f664 771 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 9.4E-177 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Patl_1316 f9654b9cbe160da0cbc95aa758c99686 336 Pfam PF00586 AIR synthase related protein, N-terminal domain 27 136 1.1E-23 T 11-10-2018 IPR016188 PurM-like, N-terminal domain Patl_1316 f9654b9cbe160da0cbc95aa758c99686 336 PIRSF PIRSF005303 1 320 2.9E-91 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Patl_1316 f9654b9cbe160da0cbc95aa758c99686 336 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 320 2.4E-105 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Patl_1316 f9654b9cbe160da0cbc95aa758c99686 336 SUPERFAMILY SSF55326 3 136 1.09E-35 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Patl_1316 f9654b9cbe160da0cbc95aa758c99686 336 Gene3D G3DSA:3.90.650.10 144 321 1.4E-52 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Patl_1316 f9654b9cbe160da0cbc95aa758c99686 336 Gene3D G3DSA:3.30.1330.10 1 142 1.1E-46 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Patl_1316 f9654b9cbe160da0cbc95aa758c99686 336 Pfam PF02769 AIR synthase related protein, C-terminal domain 148 297 1.6E-9 T 11-10-2018 IPR010918 PurM-like, C-terminal domain Patl_1316 f9654b9cbe160da0cbc95aa758c99686 336 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 320 28.857 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Patl_1316 f9654b9cbe160da0cbc95aa758c99686 336 SUPERFAMILY SSF56042 141 295 8.52E-38 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Patl_2680 b15084b32946115a17ff40df02ac8e82 475 Gene3D G3DSA:1.20.1250.20 7 213 2.9E-10 T 11-10-2018 Patl_2680 b15084b32946115a17ff40df02ac8e82 475 Pfam PF13347 MFS/sugar transport protein 16 461 4.0E-37 T 11-10-2018 Patl_2680 b15084b32946115a17ff40df02ac8e82 475 Gene3D G3DSA:1.20.1250.20 250 457 2.2E-7 T 11-10-2018 Patl_2680 b15084b32946115a17ff40df02ac8e82 475 SUPERFAMILY SSF103473 10 451 1.83E-25 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_3132 4c1570939b1cad44705e4b90752f3899 627 Pfam PF13624 SurA N-terminal domain 1 165 1.7E-49 T 11-10-2018 Patl_3132 4c1570939b1cad44705e4b90752f3899 627 SUPERFAMILY SSF54534 265 369 3.53E-31 T 11-10-2018 Patl_3132 4c1570939b1cad44705e4b90752f3899 627 Pfam PF13616 PPIC-type PPIASE domain 266 367 8.8E-31 T 11-10-2018 Patl_3132 4c1570939b1cad44705e4b90752f3899 627 Gene3D G3DSA:1.10.4030.30 37 202 1.0E-18 T 11-10-2018 Patl_3132 4c1570939b1cad44705e4b90752f3899 627 SUPERFAMILY SSF109998 40 245 4.08E-37 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily Patl_3132 4c1570939b1cad44705e4b90752f3899 627 Gene3D G3DSA:3.10.50.40 262 392 6.8E-38 T 11-10-2018 Patl_2152 6109ec6726e313196d496ea4938bb10b 140 Pfam PF01475 Ferric uptake regulator family 9 129 3.5E-47 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Patl_2152 6109ec6726e313196d496ea4938bb10b 140 SUPERFAMILY SSF46785 3 134 1.27E-43 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2152 6109ec6726e313196d496ea4938bb10b 140 Gene3D G3DSA:3.30.1490.190 84 140 1.1E-23 T 11-10-2018 Patl_2152 6109ec6726e313196d496ea4938bb10b 140 Gene3D G3DSA:1.10.10.10 1 83 6.7E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2140 d2da85a702c6ec12497421358ee4096f 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_2140 d2da85a702c6ec12497421358ee4096f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.6E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2140 d2da85a702c6ec12497421358ee4096f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 5.6E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2140 d2da85a702c6ec12497421358ee4096f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 5.6E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2140 d2da85a702c6ec12497421358ee4096f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 5.6E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2140 d2da85a702c6ec12497421358ee4096f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 5.6E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2140 d2da85a702c6ec12497421358ee4096f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 5.6E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2140 d2da85a702c6ec12497421358ee4096f 254 SUPERFAMILY SSF51735 8 254 3.06E-82 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2140 d2da85a702c6ec12497421358ee4096f 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 253 2.9E-68 T 11-10-2018 Patl_2140 d2da85a702c6ec12497421358ee4096f 254 Gene3D G3DSA:3.40.50.720 1 254 2.9E-86 T 11-10-2018 Patl_2140 d2da85a702c6ec12497421358ee4096f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 9.0E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2140 d2da85a702c6ec12497421358ee4096f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 9.0E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2140 d2da85a702c6ec12497421358ee4096f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 9.0E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2140 d2da85a702c6ec12497421358ee4096f 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 180 0.0065 T 11-10-2018 Patl_3114 1dcf12cc07d6b06ee0303693ba704256 523 Pfam PF01464 Transglycosylase SLT domain 259 355 2.2E-21 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 Patl_3114 1dcf12cc07d6b06ee0303693ba704256 523 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 270 298 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Patl_3114 1dcf12cc07d6b06ee0303693ba704256 523 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 1 435 46.948 T 11-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 Patl_3114 1dcf12cc07d6b06ee0303693ba704256 523 SUPERFAMILY SSF53850 7 228 1.38E-37 T 11-10-2018 Patl_3114 1dcf12cc07d6b06ee0303693ba704256 523 Gene3D G3DSA:3.40.190.10 3 224 1.3E-68 T 11-10-2018 Patl_3114 1dcf12cc07d6b06ee0303693ba704256 523 SMART SM00062 6 229 4.5E-31 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_3114 1dcf12cc07d6b06ee0303693ba704256 523 SUPERFAMILY SSF53955 249 422 3.52E-34 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Patl_3114 1dcf12cc07d6b06ee0303693ba704256 523 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 8 228 9.3E-36 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_3114 1dcf12cc07d6b06ee0303693ba704256 523 Gene3D G3DSA:3.40.190.10 91 185 1.3E-68 T 11-10-2018 Patl_3114 1dcf12cc07d6b06ee0303693ba704256 523 Gene3D G3DSA:1.10.530.10 234 411 1.2E-32 T 11-10-2018 Patl_0835 3dc7685a6ccae19e09061d852bdd12d2 522 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 41 440 8.6E-106 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_0835 3dc7685a6ccae19e09061d852bdd12d2 522 Gene3D G3DSA:1.20.1730.10 30 522 8.9E-163 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Patl_0835 3dc7685a6ccae19e09061d852bdd12d2 522 Pfam PF00474 Sodium:solute symporter family 41 441 2.2E-68 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_0471 7a06578fe555673755fe9c851611b3ab 100 Pfam PF00276 Ribosomal protein L23 9 95 3.3E-31 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Patl_0471 7a06578fe555673755fe9c851611b3ab 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.221 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Patl_0471 7a06578fe555673755fe9c851611b3ab 100 SUPERFAMILY SSF54189 2 93 3.09E-31 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0471 7a06578fe555673755fe9c851611b3ab 100 Gene3D G3DSA:3.30.70.330 1 99 1.3E-36 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Patl_2810 f0744a39c7e9ec86b97edd0cc6881361 450 Pfam PF00128 Alpha amylase, catalytic domain 147 328 5.3E-15 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_2810 f0744a39c7e9ec86b97edd0cc6881361 450 Pfam PF00128 Alpha amylase, catalytic domain 59 140 1.8E-13 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_2810 f0744a39c7e9ec86b97edd0cc6881361 450 SUPERFAMILY SSF51011 381 448 6.78E-11 T 11-10-2018 Patl_2810 f0744a39c7e9ec86b97edd0cc6881361 450 Gene3D G3DSA:3.20.20.80 34 367 3.0E-99 T 11-10-2018 Patl_2810 f0744a39c7e9ec86b97edd0cc6881361 450 SMART SM00642 42 359 1.3E-9 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_2810 f0744a39c7e9ec86b97edd0cc6881361 450 SUPERFAMILY SSF51445 26 368 1.0E-82 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_2810 f0744a39c7e9ec86b97edd0cc6881361 450 Gene3D G3DSA:2.60.40.1180 377 443 3.8E-6 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_2810 f0744a39c7e9ec86b97edd0cc6881361 450 Pfam PF16657 Maltogenic Amylase, C-terminal domain 378 445 1.9E-6 T 11-10-2018 IPR032091 Maltogenic Amylase, C-terminal Patl_3875 155da06a6c64233a7868aff3e633f7f3 457 Pfam PF02805 Metal binding domain of Ada 8 70 1.3E-29 T 11-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 Patl_3875 155da06a6c64233a7868aff3e633f7f3 457 Gene3D G3DSA:3.40.10.10 1 72 3.5E-29 T 11-10-2018 IPR035451 Ada-like domain superfamily Patl_3875 155da06a6c64233a7868aff3e633f7f3 457 SMART SM00342 97 180 1.6E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_3875 155da06a6c64233a7868aff3e633f7f3 457 SMART SM01009 191 306 5.5E-47 T 11-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal Patl_3875 155da06a6c64233a7868aff3e633f7f3 457 SUPERFAMILY SSF55945 192 285 1.15E-26 T 11-10-2018 Patl_3875 155da06a6c64233a7868aff3e633f7f3 457 SUPERFAMILY SSF48150 297 455 7.85E-26 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Patl_3875 155da06a6c64233a7868aff3e633f7f3 457 SUPERFAMILY SSF57884 2 85 1.16E-32 T 11-10-2018 IPR035451 Ada-like domain superfamily Patl_3875 155da06a6c64233a7868aff3e633f7f3 457 Pfam PF06029 AlkA N-terminal domain 192 306 6.3E-36 T 11-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal Patl_3875 155da06a6c64233a7868aff3e633f7f3 457 Gene3D G3DSA:1.10.340.30 307 416 7.2E-20 T 11-10-2018 Patl_3875 155da06a6c64233a7868aff3e633f7f3 457 Pfam PF12833 Helix-turn-helix domain 103 180 1.5E-13 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_3875 155da06a6c64233a7868aff3e633f7f3 457 Gene3D G3DSA:1.10.10.60 81 181 1.2E-18 T 11-10-2018 Patl_3875 155da06a6c64233a7868aff3e633f7f3 457 Gene3D G3DSA:3.30.310.20 191 306 1.0E-29 T 11-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily Patl_3875 155da06a6c64233a7868aff3e633f7f3 457 SUPERFAMILY SSF46689 135 181 6.27E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1142 8a5b5643741f47d34cb09d8f177fc787 711 SUPERFAMILY SSF56935 31 711 1.83E-126 T 11-10-2018 Patl_1142 8a5b5643741f47d34cb09d8f177fc787 711 Gene3D G3DSA:2.170.130.10 34 164 3.3E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_1142 8a5b5643741f47d34cb09d8f177fc787 711 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 694 711 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site Patl_1142 8a5b5643741f47d34cb09d8f177fc787 711 Pfam PF00593 TonB dependent receptor 242 710 7.8E-54 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1142 8a5b5643741f47d34cb09d8f177fc787 711 Gene3D G3DSA:2.40.170.20 165 711 8.1E-112 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_1142 8a5b5643741f47d34cb09d8f177fc787 711 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 63 711 9.7E-94 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 Patl_1142 8a5b5643741f47d34cb09d8f177fc787 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 155 4.7E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_2166 a47a887460a35c9b0ce50a8212de73f9 72 Gene3D G3DSA:1.10.238.10 18 72 2.9E-9 T 11-10-2018 Patl_2166 a47a887460a35c9b0ce50a8212de73f9 72 SUPERFAMILY SSF47473 12 69 4.8E-10 T 11-10-2018 IPR011992 EF-hand domain pair Patl_2166 a47a887460a35c9b0ce50a8212de73f9 72 Pfam PF13202 EF hand 22 39 0.073 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 Patl_2166 a47a887460a35c9b0ce50a8212de73f9 72 Pfam PF13202 EF hand 48 67 1.6E-6 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 Patl_2166 a47a887460a35c9b0ce50a8212de73f9 72 ProSitePatterns PS00018 EF-hand calcium-binding domain. 54 66 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Patl_2421 4e6a2f23f269024612c38f23b68bacd5 443 Pfam PF00860 Permease family 22 402 1.2E-43 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Patl_2421 4e6a2f23f269024612c38f23b68bacd5 443 PIRSF PIRSF005353 1 443 1.2E-176 T 11-10-2018 IPR026033 Purine permease PbuG-like Patl_3743 ae10ed0ac1dbf87ab0ed0a1d6d9b286d 243 Pfam PF03473 MOSC domain 76 191 2.1E-16 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 Patl_3743 ae10ed0ac1dbf87ab0ed0a1d6d9b286d 243 SUPERFAMILY SSF50800 32 242 4.81E-57 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Patl_3743 ae10ed0ac1dbf87ab0ed0a1d6d9b286d 243 Gene3D G3DSA:2.40.33.20 23 243 3.3E-61 T 11-10-2018 Patl_3943 0fb979cf122aa357fc2befa7c60e10e2 194 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 129 135 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Patl_3943 0fb979cf122aa357fc2befa7c60e10e2 194 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 11 193 1.5E-57 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Patl_3943 0fb979cf122aa357fc2befa7c60e10e2 194 SUPERFAMILY SSF53335 15 190 1.78E-48 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3943 0fb979cf122aa357fc2befa7c60e10e2 194 Pfam PF03602 Conserved hypothetical protein 95 15 193 1.1E-57 T 11-10-2018 Patl_3943 0fb979cf122aa357fc2befa7c60e10e2 194 Gene3D G3DSA:3.40.50.150 3 194 1.3E-59 T 11-10-2018 Patl_3943 0fb979cf122aa357fc2befa7c60e10e2 194 PIRSF PIRSF004553 14 194 2.3E-52 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Patl_4261 2a1bc62bac94ec0be8db4c029fb5c373 298 SUPERFAMILY SSF103481 36 138 5.75E-7 T 11-10-2018 Patl_4261 2a1bc62bac94ec0be8db4c029fb5c373 298 Pfam PF00892 EamA-like transporter family 5 135 3.6E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Patl_4261 2a1bc62bac94ec0be8db4c029fb5c373 298 Pfam PF00892 EamA-like transporter family 150 283 3.6E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Patl_4261 2a1bc62bac94ec0be8db4c029fb5c373 298 SUPERFAMILY SSF103481 194 285 6.8E-8 T 11-10-2018 Patl_3880 91977acd9f73906672b89381de8bfc45 276 Pfam PF08220 DeoR-like helix-turn-helix domain 26 77 2.6E-15 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Patl_3880 91977acd9f73906672b89381de8bfc45 276 SMART SM01134 89 250 6.7E-60 T 11-10-2018 Patl_3880 91977acd9f73906672b89381de8bfc45 276 SMART SM00420 26 78 9.5E-14 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Patl_3880 91977acd9f73906672b89381de8bfc45 276 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 58 76 4.7E-7 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Patl_3880 91977acd9f73906672b89381de8bfc45 276 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 44 58 4.7E-7 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 Patl_3880 91977acd9f73906672b89381de8bfc45 276 Pfam PF00455 DeoR C terminal sensor domain 93 248 2.1E-44 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain Patl_3880 91977acd9f73906672b89381de8bfc45 276 ProSitePatterns PS00894 DeoR-type HTH domain signature. 26 60 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Patl_3880 91977acd9f73906672b89381de8bfc45 276 Gene3D G3DSA:1.10.10.10 9 72 2.0E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3880 91977acd9f73906672b89381de8bfc45 276 SUPERFAMILY SSF100950 94 250 3.98E-30 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Patl_3880 91977acd9f73906672b89381de8bfc45 276 SUPERFAMILY SSF46785 24 81 9.45E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3370 089ad658041a231df70fa071f833d791 175 SUPERFAMILY SSF52172 2 159 2.49E-24 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3370 089ad658041a231df70fa071f833d791 175 Pfam PF02954 Bacterial regulatory protein, Fis family 131 170 3.6E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_3370 089ad658041a231df70fa071f833d791 175 SMART SM00448 2 113 7.8E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3370 089ad658041a231df70fa071f833d791 175 Gene3D G3DSA:3.40.50.2300 2 117 2.3E-21 T 11-10-2018 Patl_3370 089ad658041a231df70fa071f833d791 175 Pfam PF00072 Response regulator receiver domain 5 112 4.2E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3370 089ad658041a231df70fa071f833d791 175 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 136 153 2.3E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_3370 089ad658041a231df70fa071f833d791 175 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 153 173 2.3E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_3370 089ad658041a231df70fa071f833d791 175 Gene3D G3DSA:1.10.10.60 118 173 2.7E-21 T 11-10-2018 Patl_1730 600fa2bdfcd6ee487ab81dea1621d00c 168 SUPERFAMILY SSF142906 13 165 6.28E-38 T 11-10-2018 IPR038056 YjbR-like superfamily Patl_1730 600fa2bdfcd6ee487ab81dea1621d00c 168 Gene3D G3DSA:3.90.1150.30 76 167 1.7E-29 T 11-10-2018 IPR038056 YjbR-like superfamily Patl_1730 600fa2bdfcd6ee487ab81dea1621d00c 168 Gene3D G3DSA:3.90.1150.30 5 71 6.4E-8 T 11-10-2018 IPR038056 YjbR-like superfamily Patl_1730 600fa2bdfcd6ee487ab81dea1621d00c 168 Pfam PF04237 YjbR 20 151 7.0E-28 T 11-10-2018 IPR007351 Uncharacterised protein YjbR Patl_2132 b460040b9ce0fec33b05e8e31034b08a 363 Gene3D G3DSA:3.90.25.10 209 343 3.7E-131 T 11-10-2018 Patl_2132 b460040b9ce0fec33b05e8e31034b08a 363 SUPERFAMILY SSF51735 1 347 3.71E-92 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2132 b460040b9ce0fec33b05e8e31034b08a 363 Gene3D G3DSA:3.40.50.720 2 334 3.7E-131 T 11-10-2018 Patl_2132 b460040b9ce0fec33b05e8e31034b08a 363 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 348 3.6E-148 T 11-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Patl_2132 b460040b9ce0fec33b05e8e31034b08a 363 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 335 2.8E-94 T 11-10-2018 IPR016040 NAD(P)-binding domain Patl_1507 cae19d25bbd61e2c0c87416ca741faa0 421 Pfam PF07690 Major Facilitator Superfamily 31 382 1.3E-27 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_1507 cae19d25bbd61e2c0c87416ca741faa0 421 Gene3D G3DSA:1.20.1250.20 21 217 2.1E-19 T 11-10-2018 Patl_1507 cae19d25bbd61e2c0c87416ca741faa0 421 SUPERFAMILY SSF103473 15 417 9.42E-50 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_1507 cae19d25bbd61e2c0c87416ca741faa0 421 Gene3D G3DSA:1.20.1250.20 232 420 8.2E-25 T 11-10-2018 Patl_3998 0c8de97a3e25036668c831738db9e4d2 328 SUPERFAMILY SSF50037 280 326 2.11E-11 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal Patl_3998 0c8de97a3e25036668c831738db9e4d2 328 SUPERFAMILY SSF46785 13 67 1.2E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3998 0c8de97a3e25036668c831738db9e4d2 328 Pfam PF08279 HTH domain 14 65 6.1E-13 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 Patl_3998 0c8de97a3e25036668c831738db9e4d2 328 Gene3D G3DSA:2.30.30.100 280 322 1.8E-18 T 11-10-2018 Patl_3998 0c8de97a3e25036668c831738db9e4d2 328 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 13 326 30.857 T 11-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 Patl_3998 0c8de97a3e25036668c831738db9e4d2 328 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 91 325 2.8E-61 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Patl_3998 0c8de97a3e25036668c831738db9e4d2 328 Pfam PF03099 Biotin/lipoate A/B protein ligase family 94 217 3.8E-20 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Patl_3998 0c8de97a3e25036668c831738db9e4d2 328 SUPERFAMILY SSF55681 81 277 2.49E-57 T 11-10-2018 Patl_3998 0c8de97a3e25036668c831738db9e4d2 328 Gene3D G3DSA:3.30.930.10 74 278 2.6E-61 T 11-10-2018 Patl_3998 0c8de97a3e25036668c831738db9e4d2 328 Pfam PF02237 Biotin protein ligase C terminal domain 283 326 3.0E-10 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Patl_3998 0c8de97a3e25036668c831738db9e4d2 328 Gene3D G3DSA:1.10.10.10 9 70 1.9E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2983 86610c96b821948d0f5d078d57d7509e 501 SUPERFAMILY SSF53067 258 499 2.96E-25 T 11-10-2018 Patl_2983 86610c96b821948d0f5d078d57d7509e 501 SUPERFAMILY SSF53067 3 253 9.71E-21 T 11-10-2018 Patl_2983 86610c96b821948d0f5d078d57d7509e 501 Gene3D G3DSA:3.30.420.40 256 300 1.7E-21 T 11-10-2018 Patl_2983 86610c96b821948d0f5d078d57d7509e 501 Gene3D G3DSA:3.90.640.10 379 434 3.2E-9 T 11-10-2018 Patl_2983 86610c96b821948d0f5d078d57d7509e 501 Gene3D G3DSA:3.30.420.40 435 482 3.2E-9 T 11-10-2018 Patl_2983 86610c96b821948d0f5d078d57d7509e 501 Gene3D G3DSA:3.30.420.40 483 494 3.2E-9 T 11-10-2018 Patl_2983 86610c96b821948d0f5d078d57d7509e 501 Pfam PF06723 MreB/Mbl protein 226 279 4.8E-7 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Patl_2983 86610c96b821948d0f5d078d57d7509e 501 Gene3D G3DSA:3.90.640.10 301 310 1.7E-21 T 11-10-2018 Patl_2983 86610c96b821948d0f5d078d57d7509e 501 Gene3D G3DSA:3.30.420.40 131 255 1.7E-21 T 11-10-2018 Patl_2688 44d4feccb70e26ab4d5bac38b616c7d1 406 Gene3D G3DSA:1.20.1250.20 2 197 3.1E-19 T 11-10-2018 Patl_2688 44d4feccb70e26ab4d5bac38b616c7d1 406 SUPERFAMILY SSF103473 6 400 1.29E-39 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_2688 44d4feccb70e26ab4d5bac38b616c7d1 406 Pfam PF03825 Nucleoside H+ symporter 4 400 1.0E-127 T 11-10-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 Patl_2688 44d4feccb70e26ab4d5bac38b616c7d1 406 Gene3D G3DSA:1.20.1250.20 205 405 4.5E-32 T 11-10-2018 Patl_0082 b63d335754e1c051c181638b90368ddc 235 SMART SM00862 153 229 1.2E-16 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_0082 b63d335754e1c051c181638b90368ddc 235 Gene3D G3DSA:1.10.10.10 122 233 6.6E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0082 b63d335754e1c051c181638b90368ddc 235 Pfam PF00072 Response regulator receiver domain 6 113 7.0E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0082 b63d335754e1c051c181638b90368ddc 235 SUPERFAMILY SSF52172 4 122 1.17E-35 T 11-10-2018 IPR011006 CheY-like superfamily Patl_0082 b63d335754e1c051c181638b90368ddc 235 SUPERFAMILY SSF46894 132 230 1.39E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_0082 b63d335754e1c051c181638b90368ddc 235 Gene3D G3DSA:3.40.50.2300 2 121 6.2E-33 T 11-10-2018 Patl_0082 b63d335754e1c051c181638b90368ddc 235 SMART SM00448 4 114 2.9E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0082 b63d335754e1c051c181638b90368ddc 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 5.5E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_2944 4061982ad74be2d65814e438f50f7cce 335 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 335 183.06 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Patl_2944 4061982ad74be2d65814e438f50f7cce 335 Gene3D G3DSA:3.40.50.300 23 184 3.2E-40 T 11-10-2018 Patl_2944 4061982ad74be2d65814e438f50f7cce 335 Gene3D G3DSA:1.10.10.10 260 335 3.2E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2944 4061982ad74be2d65814e438f50f7cce 335 SUPERFAMILY SSF52540 23 254 5.01E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2944 4061982ad74be2d65814e438f50f7cce 335 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 333 2.0E-41 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Patl_2944 4061982ad74be2d65814e438f50f7cce 335 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 9.0E-118 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Patl_2944 4061982ad74be2d65814e438f50f7cce 335 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 5.7E-34 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Patl_2944 4061982ad74be2d65814e438f50f7cce 335 SMART SM00382 54 181 6.8E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2944 4061982ad74be2d65814e438f50f7cce 335 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 329 4.1E-147 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Patl_2944 4061982ad74be2d65814e438f50f7cce 335 Gene3D G3DSA:1.10.8.60 185 258 1.5E-30 T 11-10-2018 Patl_2944 4061982ad74be2d65814e438f50f7cce 335 SUPERFAMILY SSF46785 260 331 8.84E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0889 656b67f4f6f400a2f21d7b32e689670f 500 SUPERFAMILY SSF53649 38 458 2.88E-130 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_0889 656b67f4f6f400a2f21d7b32e689670f 500 Gene3D G3DSA:3.40.720.10 39 394 4.5E-130 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_0889 656b67f4f6f400a2f21d7b32e689670f 500 Gene3D G3DSA:3.30.1120.10 395 455 4.5E-130 T 11-10-2018 Patl_0889 656b67f4f6f400a2f21d7b32e689670f 500 Pfam PF00884 Sulfatase 40 363 7.3E-78 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 Pfam PF00122 E1-E2 ATPase 120 312 3.0E-50 T 11-10-2018 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 Pfam PF00702 haloacid dehalogenase-like hydrolase 330 651 3.1E-20 T 11-10-2018 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 637 653 6.6E-16 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 494 512 6.6E-16 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 669 694 6.6E-16 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 609 625 6.6E-16 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 SUPERFAMILY SSF81665 12 895 3.79E-117 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 Gene3D G3DSA:1.20.1110.10 63 892 1.9E-275 T 11-10-2018 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 Pfam PF00689 Cation transporting ATPase, C-terminus 722 892 1.4E-37 T 11-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 SUPERFAMILY SSF81660 340 540 9.81E-48 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 Gene3D G3DSA:2.70.150.10 27 235 1.9E-275 T 11-10-2018 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 Gene3D G3DSA:3.40.1110.10 343 543 1.9E-275 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 SUPERFAMILY SSF56784 331 741 2.69E-53 T 11-10-2018 IPR036412 HAD-like superfamily Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 238 354 7.1E-23 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 91 200 5.0E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 608 727 9.8E-33 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 Gene3D G3DSA:3.40.50.1000 330 682 1.9E-275 T 11-10-2018 IPR023214 HAD superfamily Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 Pfam PF00690 Cation transporter/ATPase, N-terminus 13 79 1.8E-16 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 SMART SM00831 12 85 2.6E-33 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 SUPERFAMILY SSF81653 123 231 3.66E-28 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 536 547 1.8E-39 T 11-10-2018 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 170 184 1.8E-39 T 11-10-2018 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 637 656 1.8E-39 T 11-10-2018 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 661 673 1.8E-39 T 11-10-2018 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 333 347 1.8E-39 T 11-10-2018 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 558 568 1.8E-39 T 11-10-2018 Patl_2286 8b8962e292435db1c77524f88c4c26b6 904 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 335 341 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Patl_2285 a3936086be91d20e8e871b181db2035f 323 Pfam PF00582 Universal stress protein family 22 143 2.1E-7 T 11-10-2018 IPR006016 UspA Patl_2285 a3936086be91d20e8e871b181db2035f 323 Pfam PF00582 Universal stress protein family 151 311 1.7E-11 T 11-10-2018 IPR006016 UspA Patl_2285 a3936086be91d20e8e871b181db2035f 323 SUPERFAMILY SSF52402 151 319 5.69E-19 T 11-10-2018 Patl_2285 a3936086be91d20e8e871b181db2035f 323 SUPERFAMILY SSF52402 24 144 1.67E-10 T 11-10-2018 Patl_2285 a3936086be91d20e8e871b181db2035f 323 PRINTS PR01438 Universal stress protein signature 289 311 3.8E-6 T 11-10-2018 IPR006015 Universal stress protein A Patl_2285 a3936086be91d20e8e871b181db2035f 323 PRINTS PR01438 Universal stress protein signature 151 169 3.8E-6 T 11-10-2018 IPR006015 Universal stress protein A Patl_2285 a3936086be91d20e8e871b181db2035f 323 PRINTS PR01438 Universal stress protein signature 271 283 3.8E-6 T 11-10-2018 IPR006015 Universal stress protein A Patl_2285 a3936086be91d20e8e871b181db2035f 323 Gene3D G3DSA:3.40.50.12370 1 322 1.7E-84 T 11-10-2018 Patl_3719 19958234f536cb9d0d1884abbbb97daa 273 Gene3D G3DSA:3.40.50.720 2 165 2.5E-54 T 11-10-2018 Patl_3719 19958234f536cb9d0d1884abbbb97daa 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 2.9E-74 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Patl_3719 19958234f536cb9d0d1884abbbb97daa 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 100 1.5E-22 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Patl_3719 19958234f536cb9d0d1884abbbb97daa 273 SUPERFAMILY SSF51735 4 161 1.22E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3719 19958234f536cb9d0d1884abbbb97daa 273 Gene3D G3DSA:1.10.3730.10 166 273 3.9E-33 T 11-10-2018 Patl_3719 19958234f536cb9d0d1884abbbb97daa 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 25.137 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Patl_3719 19958234f536cb9d0d1884abbbb97daa 273 PIRSF PIRSF000193 3 271 1.1E-72 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Patl_3719 19958234f536cb9d0d1884abbbb97daa 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 3.9E-29 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Patl_3719 19958234f536cb9d0d1884abbbb97daa 273 SUPERFAMILY SSF48179 163 271 1.5E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_3296 a45ffd5f3ec51c062aa9bac602dc1c09 672 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 564 671 8.3E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3296 a45ffd5f3ec51c062aa9bac602dc1c09 672 SMART SM00387 563 672 2.4E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3296 a45ffd5f3ec51c062aa9bac602dc1c09 672 SUPERFAMILY SSF55874 527 670 7.73E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3296 a45ffd5f3ec51c062aa9bac602dc1c09 672 Gene3D G3DSA:1.10.287.130 466 522 1.9E-31 T 11-10-2018 Patl_3296 a45ffd5f3ec51c062aa9bac602dc1c09 672 TIGRFAM TIGR02916 PEP_his_kin: putative PEP-CTERM system histidine kinase 5 670 9.0E-181 T 11-10-2018 IPR014265 Signal transduction histidine kinase, PEP-CTERM system, putative Patl_3296 a45ffd5f3ec51c062aa9bac602dc1c09 672 Gene3D G3DSA:3.30.565.10 523 670 1.9E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3296 a45ffd5f3ec51c062aa9bac602dc1c09 672 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 616 1.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3296 a45ffd5f3ec51c062aa9bac602dc1c09 672 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 631 1.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3296 a45ffd5f3ec51c062aa9bac602dc1c09 672 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 651 1.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3296 a45ffd5f3ec51c062aa9bac602dc1c09 672 PRINTS PR00344 Bacterial sensor protein C-terminal signature 657 670 1.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_4063 bf90725f0bf91d638b66232e5092d88e 180 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 4 163 37.22 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Patl_4063 bf90725f0bf91d638b66232e5092d88e 180 SUPERFAMILY SSF55068 2 169 1.57E-71 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Patl_4063 bf90725f0bf91d638b66232e5092d88e 180 Pfam PF01625 Peptide methionine sulfoxide reductase 6 159 2.1E-64 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Patl_4063 bf90725f0bf91d638b66232e5092d88e 180 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 158 2.5E-60 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Patl_4063 bf90725f0bf91d638b66232e5092d88e 180 Gene3D G3DSA:3.30.1060.10 1 168 7.4E-70 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 Patl_1021 d689ba48b028a3fc662494badfc5d9fe 566 Gene3D G3DSA:3.40.1770.10 15 540 1.7E-259 T 11-10-2018 Patl_1021 d689ba48b028a3fc662494badfc5d9fe 566 SUPERFAMILY SSF111326 4 553 1.57E-258 T 11-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Patl_1021 d689ba48b028a3fc662494badfc5d9fe 566 PIRSF PIRSF001423 1 558 2.9E-293 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Patl_1021 d689ba48b028a3fc662494badfc5d9fe 566 ProSitePatterns PS01233 Urocanase signature. 440 455 - T 11-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Patl_1021 d689ba48b028a3fc662494badfc5d9fe 566 Pfam PF17392 Urocanase C-terminal domain 350 544 2.6E-94 T 11-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Patl_1021 d689ba48b028a3fc662494badfc5d9fe 566 TIGRFAM TIGR01228 hutU: urocanate hydratase 8 552 1.6E-292 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Patl_1021 d689ba48b028a3fc662494badfc5d9fe 566 Pfam PF17391 Urocanase N-terminal domain 10 136 1.9E-62 T 11-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Patl_1021 d689ba48b028a3fc662494badfc5d9fe 566 Gene3D G3DSA:3.40.50.10730 140 347 1.7E-259 T 11-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Patl_1021 d689ba48b028a3fc662494badfc5d9fe 566 Hamap MF_00577 Urocanate hydratase [hutU]. 1 554 49.979 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Patl_1021 d689ba48b028a3fc662494badfc5d9fe 566 Pfam PF01175 Urocanase Rossmann-like domain 139 347 1.6E-84 T 11-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Patl_2463 da3ef5faf3ed1184305dbebe2bbdec43 231 SUPERFAMILY SSF51366 3 227 1.5E-77 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Patl_2463 da3ef5faf3ed1184305dbebe2bbdec43 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 7.7E-62 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Patl_2463 da3ef5faf3ed1184305dbebe2bbdec43 231 Gene3D G3DSA:3.20.20.70 1 229 2.2E-84 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2463 da3ef5faf3ed1184305dbebe2bbdec43 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 4.6E-52 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Patl_2463 da3ef5faf3ed1184305dbebe2bbdec43 231 SMART SM00934 5 226 1.5E-98 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Patl_2463 da3ef5faf3ed1184305dbebe2bbdec43 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Patl_2463 da3ef5faf3ed1184305dbebe2bbdec43 231 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.078 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Patl_3364 06ab063a893390122531f5512ff8bb4e 374 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 28 276 1.5E-17 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Patl_3364 06ab063a893390122531f5512ff8bb4e 374 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Patl_3364 06ab063a893390122531f5512ff8bb4e 374 SUPERFAMILY SSF51735 95 245 7.89E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3364 06ab063a893390122531f5512ff8bb4e 374 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 7.2E-22 T 11-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 Patl_3364 06ab063a893390122531f5512ff8bb4e 374 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 44.383 T 11-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 Patl_3364 06ab063a893390122531f5512ff8bb4e 374 SUPERFAMILY SSF52283 8 102 1.76E-18 T 11-10-2018 Patl_3364 06ab063a893390122531f5512ff8bb4e 374 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 255 2.8E-27 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Patl_3364 06ab063a893390122531f5512ff8bb4e 374 Gene3D G3DSA:3.40.50.720 1 277 2.5E-104 T 11-10-2018 Patl_3364 06ab063a893390122531f5512ff8bb4e 374 Gene3D G3DSA:3.40.50.720 93 257 2.5E-104 T 11-10-2018 Patl_3364 06ab063a893390122531f5512ff8bb4e 374 Gene3D G3DSA:3.30.1370.170 293 374 1.0E-20 T 11-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 Patl_2999 88043152cdcbfd0c23335425d28e961b 266 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 118 129 - T 11-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 Patl_2999 88043152cdcbfd0c23335425d28e961b 266 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 17 232 2.1E-49 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 Patl_2999 88043152cdcbfd0c23335425d28e961b 266 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 12 254 2.6E-103 T 11-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 Patl_2999 88043152cdcbfd0c23335425d28e961b 266 SUPERFAMILY SSF56534 4 247 4.58E-97 T 11-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily Patl_2999 88043152cdcbfd0c23335425d28e961b 266 Gene3D G3DSA:1.10.800.10 1 266 4.1E-100 T 11-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 Patl_2999 88043152cdcbfd0c23335425d28e961b 266 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 179 197 5.9E-9 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 Patl_2999 88043152cdcbfd0c23335425d28e961b 266 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 75 97 5.9E-9 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 Patl_2999 88043152cdcbfd0c23335425d28e961b 266 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 139 158 5.9E-9 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 Patl_2999 88043152cdcbfd0c23335425d28e961b 266 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 211 230 5.9E-9 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 Patl_0881 9d6a6e6b952f1075b53802af3b089068 510 SUPERFAMILY SSF53649 38 488 4.22E-123 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_0881 9d6a6e6b952f1075b53802af3b089068 510 ProSitePatterns PS00523 Sulfatases signature 1. 86 98 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_0881 9d6a6e6b952f1075b53802af3b089068 510 Gene3D G3DSA:3.40.720.10 38 419 1.6E-138 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_0881 9d6a6e6b952f1075b53802af3b089068 510 Pfam PF00884 Sulfatase 39 383 4.2E-71 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_0881 9d6a6e6b952f1075b53802af3b089068 510 Gene3D G3DSA:3.30.1120.10 420 484 1.6E-138 T 11-10-2018 Patl_3356 ef220a0a8800a9d739dab95500935c48 276 SUPERFAMILY SSF109604 15 269 1.95E-51 T 11-10-2018 Patl_3356 ef220a0a8800a9d739dab95500935c48 276 Gene3D G3DSA:1.10.3210.10 3 273 5.9E-53 T 11-10-2018 Patl_3356 ef220a0a8800a9d739dab95500935c48 276 Pfam PF08668 HDOD domain 17 200 1.0E-44 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Patl_1826 b42b8feafc526a7aaeef3e2f98d479f7 961 Pfam PF00593 TonB dependent receptor 416 959 9.2E-32 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1826 b42b8feafc526a7aaeef3e2f98d479f7 961 SUPERFAMILY SSF56935 26 961 4.58E-81 T 11-10-2018 Patl_1826 b42b8feafc526a7aaeef3e2f98d479f7 961 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 36 961 1.6E-191 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor Patl_1826 b42b8feafc526a7aaeef3e2f98d479f7 961 Gene3D G3DSA:2.170.130.10 30 159 2.9E-14 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_1826 b42b8feafc526a7aaeef3e2f98d479f7 961 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 146 6.0E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3598 970cbb249ba1f5f5f0fe33d23b63ce9b 413 Gene3D G3DSA:2.40.50.100 72 219 1.7E-38 T 11-10-2018 Patl_3598 970cbb249ba1f5f5f0fe33d23b63ce9b 413 Gene3D G3DSA:2.40.420.20 307 371 1.7E-38 T 11-10-2018 Patl_3598 970cbb249ba1f5f5f0fe33d23b63ce9b 413 Gene3D G3DSA:1.10.287.470 109 185 1.7E-38 T 11-10-2018 Patl_3598 970cbb249ba1f5f5f0fe33d23b63ce9b 413 Gene3D G3DSA:2.40.30.170 64 306 1.7E-38 T 11-10-2018 Patl_3598 970cbb249ba1f5f5f0fe33d23b63ce9b 413 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 373 2.8E-40 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Patl_3598 970cbb249ba1f5f5f0fe33d23b63ce9b 413 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 282 1.1E-11 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Patl_3598 970cbb249ba1f5f5f0fe33d23b63ce9b 413 SUPERFAMILY SSF111369 64 300 2.22E-19 T 11-10-2018 Patl_1012 52ef8cf3507356168308a3697390eaa1 130 PIRSF PIRSF002131 1 130 1.5E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Patl_1012 52ef8cf3507356168308a3697390eaa1 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site Patl_1012 52ef8cf3507356168308a3697390eaa1 130 SUPERFAMILY SSF53137 18 130 1.83E-47 T 11-10-2018 Patl_1012 52ef8cf3507356168308a3697390eaa1 130 Pfam PF00411 Ribosomal protein S11 20 129 2.1E-51 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Patl_1012 52ef8cf3507356168308a3697390eaa1 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 32.87 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Patl_1012 52ef8cf3507356168308a3697390eaa1 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 1.4E-55 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1012 52ef8cf3507356168308a3697390eaa1 130 Gene3D G3DSA:3.30.420.80 1 130 2.5E-56 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Patl_0188 ab38dcc9e1fd5a1a0d74fca500d54572 1301 Pfam PF13116 Protein of unknown function 492 775 2.0E-85 T 11-10-2018 IPR025263 Domain of unknown function DUF3971 Patl_0188 ab38dcc9e1fd5a1a0d74fca500d54572 1301 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 15 1253 9.6E-261 T 11-10-2018 IPR011836 Conserved hypothetical protein CHP02099 Patl_0188 ab38dcc9e1fd5a1a0d74fca500d54572 1301 Pfam PF13502 AsmA-like C-terminal region 1002 1243 5.9E-56 T 11-10-2018 IPR032712 AsmA-like, C-terminal Patl_2389 177e5d562f938199055104936eb2681a 616 SMART SM00228 512 581 1.4E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Patl_2389 177e5d562f938199055104936eb2681a 616 Pfam PF05299 M61 glycyl aminopeptidase 294 410 7.6E-40 T 11-10-2018 IPR007963 Peptidase M61, catalytic domain Patl_2389 177e5d562f938199055104936eb2681a 616 Gene3D G3DSA:2.30.42.10 512 616 1.5E-21 T 11-10-2018 Patl_2389 177e5d562f938199055104936eb2681a 616 SUPERFAMILY SSF50156 520 591 1.71E-12 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Patl_2389 177e5d562f938199055104936eb2681a 616 PIRSF PIRSF016493 3 616 7.3E-210 T 11-10-2018 IPR024191 Peptidase M61 Patl_2389 177e5d562f938199055104936eb2681a 616 SUPERFAMILY SSF55486 215 451 2.64E-9 T 11-10-2018 Patl_2389 177e5d562f938199055104936eb2681a 616 Gene3D G3DSA:1.10.390.60 203 475 6.6E-93 T 11-10-2018 Patl_2389 177e5d562f938199055104936eb2681a 616 Gene3D G3DSA:2.60.40.3650 7 184 1.0E-59 T 11-10-2018 Patl_2389 177e5d562f938199055104936eb2681a 616 Pfam PF13180 PDZ domain 514 590 1.5E-12 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Patl_1977 04e3d16918ff7a76923f3e2b003ba7b2 369 Gene3D G3DSA:3.40.50.1820 252 368 1.5E-10 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1977 04e3d16918ff7a76923f3e2b003ba7b2 369 Pfam PF10503 Esterase PHB depolymerase 266 363 1.8E-7 T 11-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 Patl_1977 04e3d16918ff7a76923f3e2b003ba7b2 369 Gene3D G3DSA:3.40.50.1820 53 201 7.4E-10 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1977 04e3d16918ff7a76923f3e2b003ba7b2 369 SUPERFAMILY SSF53474 59 364 2.22E-74 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2719 b4a2a66ed679ce14e7b5c2a91db33fbb 280 SUPERFAMILY SSF51735 8 276 1.52E-76 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2719 b4a2a66ed679ce14e7b5c2a91db33fbb 280 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 163 191 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_2719 b4a2a66ed679ce14e7b5c2a91db33fbb 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 164 4.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2719 b4a2a66ed679ce14e7b5c2a91db33fbb 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 101 112 4.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2719 b4a2a66ed679ce14e7b5c2a91db33fbb 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 176 195 4.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2719 b4a2a66ed679ce14e7b5c2a91db33fbb 280 Gene3D G3DSA:3.40.50.720 9 278 2.4E-80 T 11-10-2018 Patl_2719 b4a2a66ed679ce14e7b5c2a91db33fbb 280 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 276 2.3E-56 T 11-10-2018 Patl_2719 b4a2a66ed679ce14e7b5c2a91db33fbb 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 195 1.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2719 b4a2a66ed679ce14e7b5c2a91db33fbb 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 214 1.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2719 b4a2a66ed679ce14e7b5c2a91db33fbb 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 166 1.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2719 b4a2a66ed679ce14e7b5c2a91db33fbb 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2719 b4a2a66ed679ce14e7b5c2a91db33fbb 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 101 112 1.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2719 b4a2a66ed679ce14e7b5c2a91db33fbb 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 241 261 1.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2281 1ba91a96aeacbb15c1afc7e7f69c26c8 949 SUPERFAMILY SSF55103 241 517 6.21E-52 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Patl_2281 1ba91a96aeacbb15c1afc7e7f69c26c8 949 Gene3D G3DSA:1.10.1060.10 508 639 7.9E-10 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Patl_2281 1ba91a96aeacbb15c1afc7e7f69c26c8 949 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 541 552 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Patl_2281 1ba91a96aeacbb15c1afc7e7f69c26c8 949 Pfam PF02913 FAD linked oxidases, C-terminal domain 267 515 2.2E-52 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Patl_2281 1ba91a96aeacbb15c1afc7e7f69c26c8 949 SUPERFAMILY SSF46548 503 628 1.27E-21 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Patl_2281 1ba91a96aeacbb15c1afc7e7f69c26c8 949 Pfam PF02754 Cysteine-rich domain 711 807 1.5E-4 T 11-10-2018 IPR004017 Cysteine-rich domain Patl_2281 1ba91a96aeacbb15c1afc7e7f69c26c8 949 Gene3D G3DSA:3.30.70.2740 393 476 2.1E-8 T 11-10-2018 Patl_2281 1ba91a96aeacbb15c1afc7e7f69c26c8 949 Gene3D G3DSA:3.30.465.40 6 194 1.3E-25 T 11-10-2018 Patl_2281 1ba91a96aeacbb15c1afc7e7f69c26c8 949 Pfam PF01565 FAD binding domain 42 179 2.6E-27 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Patl_2281 1ba91a96aeacbb15c1afc7e7f69c26c8 949 Pfam PF12838 4Fe-4S dicluster domain 540 616 8.7E-11 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Patl_2281 1ba91a96aeacbb15c1afc7e7f69c26c8 949 SUPERFAMILY SSF56176 8 264 3.18E-51 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Patl_2307 dc2d03cfac152204cadbda5927f95bd1 372 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Patl_2307 dc2d03cfac152204cadbda5927f95bd1 372 SUPERFAMILY SSF51735 159 338 9.32E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2307 dc2d03cfac152204cadbda5927f95bd1 372 SUPERFAMILY SSF50129 321 371 5.18E-8 T 11-10-2018 IPR011032 GroES-like superfamily Patl_2307 dc2d03cfac152204cadbda5927f95bd1 372 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 155 2.8E-23 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_2307 dc2d03cfac152204cadbda5927f95bd1 372 Pfam PF00107 Zinc-binding dehydrogenase 198 303 1.2E-19 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_2307 dc2d03cfac152204cadbda5927f95bd1 372 Gene3D G3DSA:3.40.50.720 175 314 1.0E-107 T 11-10-2018 Patl_2307 dc2d03cfac152204cadbda5927f95bd1 372 SMART SM00829 15 369 2.1E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_2307 dc2d03cfac152204cadbda5927f95bd1 372 Gene3D G3DSA:3.90.180.10 11 366 1.0E-107 T 11-10-2018 Patl_2307 dc2d03cfac152204cadbda5927f95bd1 372 SUPERFAMILY SSF50129 8 192 7.61E-45 T 11-10-2018 IPR011032 GroES-like superfamily Patl_1159 c6ee35b3502782900d505bff9fb67830 207 Pfam PF00156 Phosphoribosyl transferase domain 24 169 2.3E-11 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Patl_1159 c6ee35b3502782900d505bff9fb67830 207 SUPERFAMILY SSF53271 15 199 1.85E-23 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Patl_1159 c6ee35b3502782900d505bff9fb67830 207 Gene3D G3DSA:3.40.50.2020 15 200 4.3E-27 T 11-10-2018 Patl_0848 783f7a6b99c961a6aba1fbab82e17899 312 Gene3D G3DSA:3.10.180.10 5 130 1.8E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_0848 783f7a6b99c961a6aba1fbab82e17899 312 Gene3D G3DSA:3.10.180.10 148 306 2.3E-32 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_0848 783f7a6b99c961a6aba1fbab82e17899 312 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 152 275 1.9E-13 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Patl_0848 783f7a6b99c961a6aba1fbab82e17899 312 SUPERFAMILY SSF54593 1 279 2.23E-36 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_3515 52e641fe06cbdeb6e0ee2c4fffb2be78 409 Gene3D G3DSA:3.90.640.10 235 300 8.1E-121 T 11-10-2018 Patl_3515 52e641fe06cbdeb6e0ee2c4fffb2be78 409 SMART SM00842 10 196 7.1E-101 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Patl_3515 52e641fe06cbdeb6e0ee2c4fffb2be78 409 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 409 30.022 T 11-10-2018 IPR020823 Cell division protein FtsA Patl_3515 52e641fe06cbdeb6e0ee2c4fffb2be78 409 Pfam PF14450 Cell division protein FtsA 11 187 4.6E-8 T 11-10-2018 Patl_3515 52e641fe06cbdeb6e0ee2c4fffb2be78 409 SUPERFAMILY SSF53067 198 377 3.76E-50 T 11-10-2018 Patl_3515 52e641fe06cbdeb6e0ee2c4fffb2be78 409 Gene3D G3DSA:3.30.420.40 197 352 8.1E-121 T 11-10-2018 Patl_3515 52e641fe06cbdeb6e0ee2c4fffb2be78 409 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 6.7E-155 T 11-10-2018 IPR020823 Cell division protein FtsA Patl_3515 52e641fe06cbdeb6e0ee2c4fffb2be78 409 Gene3D G3DSA:3.30.1490.110 87 169 8.1E-121 T 11-10-2018 Patl_3515 52e641fe06cbdeb6e0ee2c4fffb2be78 409 Gene3D G3DSA:3.30.420.40 13 372 8.1E-121 T 11-10-2018 Patl_3515 52e641fe06cbdeb6e0ee2c4fffb2be78 409 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.6E-31 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Patl_3515 52e641fe06cbdeb6e0ee2c4fffb2be78 409 Pfam PF14450 Cell division protein FtsA 207 374 7.7E-26 T 11-10-2018 Patl_3515 52e641fe06cbdeb6e0ee2c4fffb2be78 409 SUPERFAMILY SSF53067 8 221 1.3E-57 T 11-10-2018 Patl_3515 52e641fe06cbdeb6e0ee2c4fffb2be78 409 PIRSF PIRSF003101 1 409 9.2E-153 T 11-10-2018 IPR020823 Cell division protein FtsA Patl_0508 6a65cdeda233240c35120e7adf804e7d 371 SUPERFAMILY SSF50952 23 370 6.41E-36 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Patl_0508 6a65cdeda233240c35120e7adf804e7d 371 Pfam PF07995 Glucose / Sorbosone dehydrogenase 164 297 2.5E-13 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase Patl_0508 6a65cdeda233240c35120e7adf804e7d 371 Gene3D G3DSA:2.120.10.30 23 369 3.2E-24 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Patl_3102 ccc8be0fb789e14d37a869505350de53 306 SMART SM00448 178 299 1.2E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3102 ccc8be0fb789e14d37a869505350de53 306 Gene3D G3DSA:2.40.50.180 39 153 1.2E-27 T 11-10-2018 Patl_3102 ccc8be0fb789e14d37a869505350de53 306 Gene3D G3DSA:3.40.50.2300 166 305 4.0E-25 T 11-10-2018 Patl_3102 ccc8be0fb789e14d37a869505350de53 306 PIRSF PIRSF002867 1 306 8.3E-107 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV Patl_3102 ccc8be0fb789e14d37a869505350de53 306 SUPERFAMILY SSF50341 16 157 4.58E-34 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Patl_3102 ccc8be0fb789e14d37a869505350de53 306 Pfam PF00072 Response regulator receiver domain 180 299 1.2E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3102 ccc8be0fb789e14d37a869505350de53 306 Pfam PF01584 CheW-like domain 21 155 1.9E-33 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Patl_3102 ccc8be0fb789e14d37a869505350de53 306 SUPERFAMILY SSF52172 176 304 2.28E-25 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3102 ccc8be0fb789e14d37a869505350de53 306 SMART SM00260 17 153 6.7E-21 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Patl_3102 ccc8be0fb789e14d37a869505350de53 306 Gene3D G3DSA:2.30.30.40 24 147 1.2E-27 T 11-10-2018 Patl_4286 d5a1d572cb51b06409812632f86a5450 1013 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 40 1013 1.8E-188 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor Patl_4286 d5a1d572cb51b06409812632f86a5450 1013 Gene3D G3DSA:2.170.130.10 41 165 6.8E-19 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_4286 d5a1d572cb51b06409812632f86a5450 1013 SUPERFAMILY SSF56935 38 1013 6.59E-74 T 11-10-2018 Patl_4286 d5a1d572cb51b06409812632f86a5450 1013 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 161 1.1E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_4286 d5a1d572cb51b06409812632f86a5450 1013 Pfam PF00593 TonB dependent receptor 418 1012 2.0E-25 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0563 3a019dd4e7bd1a68892677f57ff26eb2 323 Pfam PF01380 SIS domain 41 171 1.4E-32 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Patl_0563 3a019dd4e7bd1a68892677f57ff26eb2 323 SMART SM00116 274 322 2.8 T 11-10-2018 IPR000644 CBS domain Patl_0563 3a019dd4e7bd1a68892677f57ff26eb2 323 SMART SM00116 209 257 1.9 T 11-10-2018 IPR000644 CBS domain Patl_0563 3a019dd4e7bd1a68892677f57ff26eb2 323 Gene3D G3DSA:3.10.580.10 195 320 1.2E-40 T 11-10-2018 Patl_0563 3a019dd4e7bd1a68892677f57ff26eb2 323 SUPERFAMILY SSF53697 7 321 2.22E-67 T 11-10-2018 Patl_0563 3a019dd4e7bd1a68892677f57ff26eb2 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 44 312 1.2E-106 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Patl_0563 3a019dd4e7bd1a68892677f57ff26eb2 323 Pfam PF00571 CBS domain 268 320 7.3E-6 T 11-10-2018 IPR000644 CBS domain Patl_0563 3a019dd4e7bd1a68892677f57ff26eb2 323 Pfam PF00571 CBS domain 211 257 3.4E-5 T 11-10-2018 IPR000644 CBS domain Patl_0563 3a019dd4e7bd1a68892677f57ff26eb2 323 Gene3D G3DSA:3.40.50.10490 1 194 3.4E-66 T 11-10-2018 Patl_0563 3a019dd4e7bd1a68892677f57ff26eb2 323 PIRSF PIRSF004692 1 323 2.4E-129 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 Patl_2997 4371e009fae962a8359c7ca1b78cb41d 360 Gene3D G3DSA:3.10.180.10 4 157 4.1E-46 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2997 4371e009fae962a8359c7ca1b78cb41d 360 PIRSF PIRSF009283 2 357 9.9E-115 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 Patl_2997 4371e009fae962a8359c7ca1b78cb41d 360 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 8 145 4.4E-54 T 11-10-2018 Patl_2997 4371e009fae962a8359c7ca1b78cb41d 360 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 165 276 3.6E-11 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Patl_2997 4371e009fae962a8359c7ca1b78cb41d 360 SUPERFAMILY SSF54593 7 343 3.13E-73 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2997 4371e009fae962a8359c7ca1b78cb41d 360 Gene3D G3DSA:3.10.180.10 160 357 7.4E-66 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2997 4371e009fae962a8359c7ca1b78cb41d 360 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 14 355 1.6E-122 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 Patl_2176 c54e7bc13cfcd1d97fbe48dffc830af8 143 PIRSF PIRSF000303 1 143 1.0E-60 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Patl_2176 c54e7bc13cfcd1d97fbe48dffc830af8 143 Pfam PF00255 Glutathione peroxidase 2 93 3.1E-38 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Patl_2176 c54e7bc13cfcd1d97fbe48dffc830af8 143 PRINTS PR01011 Glutathione peroxidase family signature 39 55 1.3E-20 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Patl_2176 c54e7bc13cfcd1d97fbe48dffc830af8 143 PRINTS PR01011 Glutathione peroxidase family signature 4 21 1.3E-20 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Patl_2176 c54e7bc13cfcd1d97fbe48dffc830af8 143 PRINTS PR01011 Glutathione peroxidase family signature 105 114 1.3E-20 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Patl_2176 c54e7bc13cfcd1d97fbe48dffc830af8 143 SUPERFAMILY SSF52833 4 141 4.81E-56 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_2176 c54e7bc13cfcd1d97fbe48dffc830af8 143 ProSitePatterns PS00460 Glutathione peroxidases active site. 6 21 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 Patl_2176 c54e7bc13cfcd1d97fbe48dffc830af8 143 Gene3D G3DSA:3.40.30.10 1 143 7.0E-66 T 11-10-2018 Patl_1490 37153f50cdaf292eab0a7f4a3608ec37 278 SUPERFAMILY SSF52540 1 252 4.58E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1490 37153f50cdaf292eab0a7f4a3608ec37 278 Pfam PF00005 ABC transporter 17 150 1.0E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1490 37153f50cdaf292eab0a7f4a3608ec37 278 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_1490 37153f50cdaf292eab0a7f4a3608ec37 278 SMART SM00382 26 240 1.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1490 37153f50cdaf292eab0a7f4a3608ec37 278 Gene3D G3DSA:3.40.50.300 1 270 2.1E-58 T 11-10-2018 Patl_3918 d7065ab208b84e0ef6835effd6e6bf23 198 Pfam PF01931 Protein of unknown function DUF84 27 189 5.2E-58 T 11-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 Patl_3918 d7065ab208b84e0ef6835effd6e6bf23 198 Gene3D G3DSA:3.90.950.10 11 196 1.0E-59 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Patl_3918 d7065ab208b84e0ef6835effd6e6bf23 198 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 26 194 4.0E-39 T 11-10-2018 IPR002786 Non-canonical purine NTP phosphatase Patl_3918 d7065ab208b84e0ef6835effd6e6bf23 198 Hamap MF_00648 Non-canonical purine NTP phosphatase. 22 194 29.395 T 11-10-2018 IPR002786 Non-canonical purine NTP phosphatase Patl_3918 d7065ab208b84e0ef6835effd6e6bf23 198 SUPERFAMILY SSF52972 22 194 5.67E-59 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Patl_0201 7b4969cbcc7b399bac261bea08edf421 719 SUPERFAMILY SSF52096 3 304 4.81E-68 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_0201 7b4969cbcc7b399bac261bea08edf421 719 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 2.2E-58 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Patl_0201 7b4969cbcc7b399bac261bea08edf421 719 Gene3D G3DSA:3.90.226.10 1 312 1.5E-94 T 11-10-2018 Patl_0201 7b4969cbcc7b399bac261bea08edf421 719 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Patl_0201 7b4969cbcc7b399bac261bea08edf421 719 Gene3D G3DSA:3.40.50.720 314 497 2.0E-64 T 11-10-2018 Patl_0201 7b4969cbcc7b399bac261bea08edf421 719 SUPERFAMILY SSF51735 312 496 9.05E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0201 7b4969cbcc7b399bac261bea08edf421 719 SUPERFAMILY SSF48179 625 715 2.21E-23 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_0201 7b4969cbcc7b399bac261bea08edf421 719 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 205 4.5E-38 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Patl_0201 7b4969cbcc7b399bac261bea08edf421 719 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 592 7.1E-22 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Patl_0201 7b4969cbcc7b399bac261bea08edf421 719 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Patl_0201 7b4969cbcc7b399bac261bea08edf421 719 SUPERFAMILY SSF48179 496 601 1.28E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_0201 7b4969cbcc7b399bac261bea08edf421 719 Gene3D G3DSA:1.10.1040.50 498 710 3.8E-69 T 11-10-2018 Patl_0201 7b4969cbcc7b399bac261bea08edf421 719 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 11-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Patl_2860 1355a360f5930dfb72cc13b585bc77f2 249 SUPERFAMILY SSF46785 18 87 2.97E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2860 1355a360f5930dfb72cc13b585bc77f2 249 SMART SM00866 103 243 3.2E-27 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Patl_2860 1355a360f5930dfb72cc13b585bc77f2 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 2.7E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2860 1355a360f5930dfb72cc13b585bc77f2 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 2.7E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2860 1355a360f5930dfb72cc13b585bc77f2 249 Gene3D G3DSA:3.40.1410.10 92 248 8.2E-35 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Patl_2860 1355a360f5930dfb72cc13b585bc77f2 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 83 7.7E-22 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2860 1355a360f5930dfb72cc13b585bc77f2 249 Gene3D G3DSA:1.10.10.10 16 84 1.7E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2860 1355a360f5930dfb72cc13b585bc77f2 249 SMART SM00345 24 83 7.2E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2860 1355a360f5930dfb72cc13b585bc77f2 249 Pfam PF07702 UTRA domain 108 243 1.0E-28 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Patl_2860 1355a360f5930dfb72cc13b585bc77f2 249 SUPERFAMILY SSF64288 73 249 1.54E-36 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Patl_3841 3baf32776e0a4a5181cad4aad060a344 156 PIRSF PIRSF005900 1 156 3.6E-50 T 11-10-2018 IPR002177 DNA-binding protein Dps Patl_3841 3baf32776e0a4a5181cad4aad060a344 156 Pfam PF00210 Ferritin-like domain 19 153 3.6E-29 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Patl_3841 3baf32776e0a4a5181cad4aad060a344 156 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 Patl_3841 3baf32776e0a4a5181cad4aad060a344 156 SUPERFAMILY SSF47240 5 154 2.03E-46 T 11-10-2018 IPR009078 Ferritin-like superfamily Patl_3841 3baf32776e0a4a5181cad4aad060a344 156 Gene3D G3DSA:1.20.1260.10 1 156 5.7E-57 T 11-10-2018 IPR012347 Ferritin-like Patl_3841 3baf32776e0a4a5181cad4aad060a344 156 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 Patl_3841 3baf32776e0a4a5181cad4aad060a344 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 2.2E-11 T 11-10-2018 IPR002177 DNA-binding protein Dps Patl_3841 3baf32776e0a4a5181cad4aad060a344 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 2.2E-11 T 11-10-2018 IPR002177 DNA-binding protein Dps Patl_3841 3baf32776e0a4a5181cad4aad060a344 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 2.2E-11 T 11-10-2018 IPR002177 DNA-binding protein Dps Patl_3441 2fed7ab050dc84180357a9d849dbd9b2 843 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 53 - T 11-10-2018 IPR010916 TonB box, conserved site Patl_3441 2fed7ab050dc84180357a9d849dbd9b2 843 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 181 7.8E-21 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3441 2fed7ab050dc84180357a9d849dbd9b2 843 SUPERFAMILY SSF56935 44 843 8.79E-104 T 11-10-2018 Patl_3441 2fed7ab050dc84180357a9d849dbd9b2 843 Pfam PF00593 TonB dependent receptor 316 841 2.1E-46 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3441 2fed7ab050dc84180357a9d849dbd9b2 843 Gene3D G3DSA:2.170.130.10 41 185 5.5E-34 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_3441 2fed7ab050dc84180357a9d849dbd9b2 843 Gene3D G3DSA:2.40.170.20 400 843 2.2E-61 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_3259 37efafcd5c8aa8c6d0a5e59bc950bde3 343 Hamap MF_00268 Protein RecA [recA]. 5 329 51.62 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Patl_3259 37efafcd5c8aa8c6d0a5e59bc950bde3 343 Pfam PF00154 recA bacterial DNA recombination protein 7 267 4.5E-146 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Patl_3259 37efafcd5c8aa8c6d0a5e59bc950bde3 343 PRINTS PR00142 RecA protein signature 165 194 6.3E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Patl_3259 37efafcd5c8aa8c6d0a5e59bc950bde3 343 PRINTS PR00142 RecA protein signature 297 314 6.3E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Patl_3259 37efafcd5c8aa8c6d0a5e59bc950bde3 343 PRINTS PR00142 RecA protein signature 127 156 6.3E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Patl_3259 37efafcd5c8aa8c6d0a5e59bc950bde3 343 PRINTS PR00142 RecA protein signature 93 122 6.3E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Patl_3259 37efafcd5c8aa8c6d0a5e59bc950bde3 343 PRINTS PR00142 RecA protein signature 243 272 6.3E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Patl_3259 37efafcd5c8aa8c6d0a5e59bc950bde3 343 PRINTS PR00142 RecA protein signature 210 238 6.3E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Patl_3259 37efafcd5c8aa8c6d0a5e59bc950bde3 343 ProSitePatterns PS00321 recA signature. 213 221 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Patl_3259 37efafcd5c8aa8c6d0a5e59bc950bde3 343 SUPERFAMILY SSF54752 269 324 6.28E-20 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Patl_3259 37efafcd5c8aa8c6d0a5e59bc950bde3 343 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 323 5.3E-174 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Patl_3259 37efafcd5c8aa8c6d0a5e59bc950bde3 343 Gene3D G3DSA:3.30.250.10 268 342 4.8E-25 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Patl_3259 37efafcd5c8aa8c6d0a5e59bc950bde3 343 SUPERFAMILY SSF52540 4 267 1.34E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3259 37efafcd5c8aa8c6d0a5e59bc950bde3 343 Gene3D G3DSA:3.40.50.300 26 267 3.3E-83 T 11-10-2018 Patl_3259 37efafcd5c8aa8c6d0a5e59bc950bde3 343 SMART SM00382 57 228 6.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0774 d6c1505f37610e291f4fcbe8fbec8ef5 321 SUPERFAMILY SSF103481 207 304 6.28E-14 T 11-10-2018 Patl_0774 d6c1505f37610e291f4fcbe8fbec8ef5 321 Pfam PF00892 EamA-like transporter family 10 144 1.2E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Patl_0774 d6c1505f37610e291f4fcbe8fbec8ef5 321 Pfam PF00892 EamA-like transporter family 170 301 3.9E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Patl_0774 d6c1505f37610e291f4fcbe8fbec8ef5 321 SUPERFAMILY SSF103481 46 148 1.57E-5 T 11-10-2018 Patl_1048 0afe1fd83eb04932186b4daa5e3f4efe 666 Pfam PF00563 EAL domain 413 639 1.0E-64 T 11-10-2018 IPR001633 EAL domain Patl_1048 0afe1fd83eb04932186b4daa5e3f4efe 666 Gene3D G3DSA:3.30.70.270 229 394 2.0E-49 T 11-10-2018 Patl_1048 0afe1fd83eb04932186b4daa5e3f4efe 666 SMART SM00267 224 397 2.6E-49 T 11-10-2018 IPR000160 GGDEF domain Patl_1048 0afe1fd83eb04932186b4daa5e3f4efe 666 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 388 2.9E-40 T 11-10-2018 IPR000160 GGDEF domain Patl_1048 0afe1fd83eb04932186b4daa5e3f4efe 666 Gene3D G3DSA:3.20.20.450 408 659 5.9E-82 T 11-10-2018 IPR035919 EAL domain superfamily Patl_1048 0afe1fd83eb04932186b4daa5e3f4efe 666 SUPERFAMILY SSF55073 240 387 3.14E-44 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_1048 0afe1fd83eb04932186b4daa5e3f4efe 666 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 387 7.1E-43 T 11-10-2018 IPR000160 GGDEF domain Patl_1048 0afe1fd83eb04932186b4daa5e3f4efe 666 SUPERFAMILY SSF141868 411 651 6.02E-79 T 11-10-2018 IPR035919 EAL domain superfamily Patl_1048 0afe1fd83eb04932186b4daa5e3f4efe 666 SMART SM00052 405 644 4.7E-90 T 11-10-2018 IPR001633 EAL domain Patl_3641 63b0342d6c83d3b6b640a5e0045b4e76 253 SUPERFAMILY SSF51735 6 251 7.88E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3641 63b0342d6c83d3b6b640a5e0045b4e76 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_3641 63b0342d6c83d3b6b640a5e0045b4e76 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 6.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3641 63b0342d6c83d3b6b640a5e0045b4e76 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 6.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3641 63b0342d6c83d3b6b640a5e0045b4e76 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 6.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3641 63b0342d6c83d3b6b640a5e0045b4e76 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 250 7.6E-59 T 11-10-2018 Patl_3641 63b0342d6c83d3b6b640a5e0045b4e76 253 Gene3D G3DSA:3.40.50.720 1 251 1.7E-72 T 11-10-2018 Patl_3641 63b0342d6c83d3b6b640a5e0045b4e76 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 8.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3641 63b0342d6c83d3b6b640a5e0045b4e76 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 8.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3641 63b0342d6c83d3b6b640a5e0045b4e76 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 8.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3641 63b0342d6c83d3b6b640a5e0045b4e76 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 8.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3641 63b0342d6c83d3b6b640a5e0045b4e76 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3641 63b0342d6c83d3b6b640a5e0045b4e76 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 8.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2912 60b0bf1e3239640c39e7bcbd0475ce4d 842 Pfam PF12704 MacB-like periplasmic core domain 24 200 1.7E-7 T 11-10-2018 IPR025857 MacB-like periplasmic core domain Patl_2912 60b0bf1e3239640c39e7bcbd0475ce4d 842 Pfam PF02687 FtsX-like permease family 746 833 6.0E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Patl_2912 60b0bf1e3239640c39e7bcbd0475ce4d 842 Pfam PF02687 FtsX-like permease family 290 380 4.5E-9 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Patl_3111 d2e2b25f3af7de8e7c4c22d4f60c3a41 633 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 521 626 1.6E-24 T 11-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 Patl_3111 d2e2b25f3af7de8e7c4c22d4f60c3a41 633 SUPERFAMILY SSF55486 245 485 5.86E-70 T 11-10-2018 Patl_3111 d2e2b25f3af7de8e7c4c22d4f60c3a41 633 Gene3D G3DSA:1.10.390.10 338 491 3.5E-50 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily Patl_3111 d2e2b25f3af7de8e7c4c22d4f60c3a41 633 Gene3D G3DSA:2.60.40.1730 58 240 1.4E-65 T 11-10-2018 Patl_3111 d2e2b25f3af7de8e7c4c22d4f60c3a41 633 Gene3D G3DSA:1.25.40.320 493 632 3.9E-47 T 11-10-2018 IPR038502 Peptidase M1 LTA-4 hydrolase/aminopeptidase, C-terminal domain superfamily Patl_3111 d2e2b25f3af7de8e7c4c22d4f60c3a41 633 SMART SM01263 493 632 4.3E-49 T 11-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 Patl_3111 d2e2b25f3af7de8e7c4c22d4f60c3a41 633 SUPERFAMILY SSF48371 493 626 1.78E-38 T 11-10-2018 IPR016024 Armadillo-type fold Patl_3111 d2e2b25f3af7de8e7c4c22d4f60c3a41 633 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 298 308 2.5E-17 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_3111 d2e2b25f3af7de8e7c4c22d4f60c3a41 633 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 224 239 2.5E-17 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_3111 d2e2b25f3af7de8e7c4c22d4f60c3a41 633 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 325 340 2.5E-17 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_3111 d2e2b25f3af7de8e7c4c22d4f60c3a41 633 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 179 194 2.5E-17 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_3111 d2e2b25f3af7de8e7c4c22d4f60c3a41 633 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 344 356 2.5E-17 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_3111 d2e2b25f3af7de8e7c4c22d4f60c3a41 633 Gene3D G3DSA:1.10.1740.60 241 337 5.4E-42 T 11-10-2018 Patl_3111 d2e2b25f3af7de8e7c4c22d4f60c3a41 633 SUPERFAMILY SSF63737 47 241 2.22E-47 T 11-10-2018 Patl_3111 d2e2b25f3af7de8e7c4c22d4f60c3a41 633 Pfam PF01433 Peptidase family M1 domain 250 461 3.1E-51 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_3007 fbfd350a94349b163783fc1a9bc8bf57 343 SUPERFAMILY SSF161098 93 324 1.44E-20 T 11-10-2018 IPR035906 MetI-like superfamily Patl_3007 fbfd350a94349b163783fc1a9bc8bf57 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 334 1.0E-39 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Patl_3464 1c41a9d6502383e505766626a9b538c3 525 SUPERFAMILY SSF58104 221 523 2.88E-68 T 11-10-2018 Patl_3464 1c41a9d6502383e505766626a9b538c3 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 3.6E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Patl_3464 1c41a9d6502383e505766626a9b538c3 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 388 3.6E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Patl_3464 1c41a9d6502383e505766626a9b538c3 525 Pfam PF00672 HAMP domain 198 239 2.9E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_3464 1c41a9d6502383e505766626a9b538c3 525 SMART SM00283 263 524 1.9E-57 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_3464 1c41a9d6502383e505766626a9b538c3 525 SMART SM00304 196 248 1.7E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_3464 1c41a9d6502383e505766626a9b538c3 525 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 491 1.3E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_3464 1c41a9d6502383e505766626a9b538c3 525 Gene3D G3DSA:1.10.287.950 196 523 8.6E-65 T 11-10-2018 Patl_1970 6f4124814ecb50c9f57fd2798651ac03 529 ProSitePatterns PS00216 Sugar transport proteins signature 1. 318 334 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Patl_1970 6f4124814ecb50c9f57fd2798651ac03 529 SUPERFAMILY SSF103473 7 516 2.88E-61 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_1970 6f4124814ecb50c9f57fd2798651ac03 529 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 6 351 2.5E-76 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_1970 6f4124814ecb50c9f57fd2798651ac03 529 Gene3D G3DSA:1.20.1250.20 2 228 4.7E-55 T 11-10-2018 Patl_1970 6f4124814ecb50c9f57fd2798651ac03 529 Pfam PF00083 Sugar (and other) transporter 413 517 6.1E-21 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Patl_1970 6f4124814ecb50c9f57fd2798651ac03 529 Pfam PF00083 Sugar (and other) transporter 11 345 4.3E-74 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Patl_1970 6f4124814ecb50c9f57fd2798651ac03 529 PRINTS PR00171 Sugar transporter signature 274 284 6.1E-15 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_1970 6f4124814ecb50c9f57fd2798651ac03 529 PRINTS PR00171 Sugar transporter signature 420 441 6.1E-15 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_1970 6f4124814ecb50c9f57fd2798651ac03 529 PRINTS PR00171 Sugar transporter signature 19 29 6.1E-15 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_1970 6f4124814ecb50c9f57fd2798651ac03 529 PRINTS PR00171 Sugar transporter signature 443 455 6.1E-15 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 Gene3D G3DSA:3.30.70.1430 42 820 9.4E-279 T 11-10-2018 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 SUPERFAMILY SSF82693 154 333 3.66E-16 T 11-10-2018 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 Gene3D G3DSA:3.30.70.1440 670 870 9.4E-279 T 11-10-2018 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 Gene3D G3DSA:3.30.2090.10 724 812 9.4E-279 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 Gene3D G3DSA:3.30.70.1320 136 335 9.4E-279 T 11-10-2018 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1036 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 Gene3D G3DSA:3.30.70.1430 568 669 9.4E-279 T 11-10-2018 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 SUPERFAMILY SSF82866 299 506 4.45E-36 T 11-10-2018 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 Gene3D G3DSA:1.20.1640.10 519 1027 9.4E-279 T 11-10-2018 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 SUPERFAMILY SSF82714 725 809 1.27E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 Pfam PF00873 AcrB/AcrD/AcrF family 5 1031 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 Gene3D G3DSA:1.20.1640.10 14 518 9.4E-279 T 11-10-2018 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 SUPERFAMILY SSF82693 42 127 1.74E-20 T 11-10-2018 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 SUPERFAMILY SSF82714 192 274 6.54E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 SUPERFAMILY SSF82866 813 1034 3.14E-53 T 11-10-2018 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 2.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 2.5E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 SUPERFAMILY SSF82693 567 667 8.37E-5 T 11-10-2018 Patl_2031 da0d111b7d1718389d42f36ab0d46ce8 1037 Gene3D G3DSA:3.30.2090.10 188 278 9.4E-279 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_1648 26f7a16d295ef538d720b29f9239d22b 469 Gene3D G3DSA:2.40.30.10 237 326 3.8E-25 T 11-10-2018 Patl_1648 26f7a16d295ef538d720b29f9239d22b 469 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Patl_1648 26f7a16d295ef538d720b29f9239d22b 469 SUPERFAMILY SSF50447 241 327 1.37E-22 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Patl_1648 26f7a16d295ef538d720b29f9239d22b 469 Gene3D G3DSA:2.40.30.10 327 432 7.4E-33 T 11-10-2018 Patl_1648 26f7a16d295ef538d720b29f9239d22b 469 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 468 52.182 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Patl_1648 26f7a16d295ef538d720b29f9239d22b 469 SUPERFAMILY SSF52540 17 233 1.42E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1648 26f7a16d295ef538d720b29f9239d22b 469 PRINTS PR00315 GTP-binding elongation factor signature 107 117 1.9E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1648 26f7a16d295ef538d720b29f9239d22b 469 PRINTS PR00315 GTP-binding elongation factor signature 26 39 1.9E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1648 26f7a16d295ef538d720b29f9239d22b 469 PRINTS PR00315 GTP-binding elongation factor signature 160 169 1.9E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1648 26f7a16d295ef538d720b29f9239d22b 469 PRINTS PR00315 GTP-binding elongation factor signature 87 95 1.9E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1648 26f7a16d295ef538d720b29f9239d22b 469 PRINTS PR00315 GTP-binding elongation factor signature 123 134 1.9E-13 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1648 26f7a16d295ef538d720b29f9239d22b 469 Gene3D G3DSA:3.40.50.300 2 236 6.1E-76 T 11-10-2018 Patl_1648 26f7a16d295ef538d720b29f9239d22b 469 Pfam PF00009 Elongation factor Tu GTP binding domain 23 210 3.0E-44 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1648 26f7a16d295ef538d720b29f9239d22b 469 SUPERFAMILY SSF50465 332 431 3.64E-31 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Patl_1648 26f7a16d295ef538d720b29f9239d22b 469 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 209 1.2E-12 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Patl_1648 26f7a16d295ef538d720b29f9239d22b 469 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 430 9.8E-195 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Patl_1175 823cba8854550eb5569803765260b431 338 Pfam PF01757 Acyltransferase family 6 320 4.9E-17 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Patl_2371 c99bcff768df10ae9bfc415adbea6be5 234 Gene3D G3DSA:2.30.210.20 4 61 4.8E-26 T 11-10-2018 Patl_2371 c99bcff768df10ae9bfc415adbea6be5 234 SUPERFAMILY SSF55729 4 230 6.36E-94 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_2371 c99bcff768df10ae9bfc415adbea6be5 234 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 234 95.447 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Patl_2371 c99bcff768df10ae9bfc415adbea6be5 234 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 205 3.5E-74 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Patl_2371 c99bcff768df10ae9bfc415adbea6be5 234 Gene3D G3DSA:3.40.630.70 62 234 7.2E-67 T 11-10-2018 Patl_2371 c99bcff768df10ae9bfc415adbea6be5 234 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 34 218 3.3E-67 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Patl_0008 e735d8bf74702d96dc992a8414c759ca 692 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 550 8.9E-213 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_0008 e735d8bf74702d96dc992a8414c759ca 692 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 688 4.2E-271 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_0008 e735d8bf74702d96dc992a8414c759ca 692 Pfam PF05746 DALR anticodon binding domain 582 678 4.8E-11 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Patl_0008 e735d8bf74702d96dc992a8414c759ca 692 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.09 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_0008 e735d8bf74702d96dc992a8414c759ca 692 Gene3D G3DSA:1.10.730.10 574 680 2.6E-7 T 11-10-2018 Patl_0008 e735d8bf74702d96dc992a8414c759ca 692 SMART SM00836 585 688 0.0075 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Patl_0008 e735d8bf74702d96dc992a8414c759ca 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 3.6E-36 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_0008 e735d8bf74702d96dc992a8414c759ca 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 3.6E-36 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_0008 e735d8bf74702d96dc992a8414c759ca 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 3.6E-36 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_0008 e735d8bf74702d96dc992a8414c759ca 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 3.6E-36 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_0008 e735d8bf74702d96dc992a8414c759ca 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 3.6E-36 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Patl_0008 e735d8bf74702d96dc992a8414c759ca 692 SUPERFAMILY SSF109604 338 490 2.93E-14 T 11-10-2018 Patl_0008 e735d8bf74702d96dc992a8414c759ca 692 SUPERFAMILY SSF47323 583 677 2.22E-5 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1805 8e026c0434d74be389c9b7b3c13cb57b 236 SUPERFAMILY SSF55718 137 208 1.63E-5 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Patl_1805 8e026c0434d74be389c9b7b3c13cb57b 236 Gene3D G3DSA:1.10.10.10 3 116 3.8E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1805 8e026c0434d74be389c9b7b3c13cb57b 236 Pfam PF01638 HxlR-like helix-turn-helix 19 105 2.7E-22 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type Patl_1805 8e026c0434d74be389c9b7b3c13cb57b 236 SUPERFAMILY SSF46785 5 106 6.67E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3604 86394777f4a1ca9539a468f281192452 1172 SMART SM00388 659 724 8.1E-25 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3604 86394777f4a1ca9539a468f281192452 1172 Gene3D G3DSA:3.30.450.20 395 543 4.6E-20 T 11-10-2018 Patl_3604 86394777f4a1ca9539a468f281192452 1172 Gene3D G3DSA:3.40.50.2300 1043 1172 1.5E-42 T 11-10-2018 Patl_3604 86394777f4a1ca9539a468f281192452 1172 Gene3D G3DSA:3.40.50.2300 896 1026 1.1E-22 T 11-10-2018 Patl_3604 86394777f4a1ca9539a468f281192452 1172 Pfam PF08447 PAS fold 160 247 3.3E-15 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Patl_3604 86394777f4a1ca9539a468f281192452 1172 Pfam PF08447 PAS fold 555 638 1.1E-7 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Patl_3604 86394777f4a1ca9539a468f281192452 1172 Pfam PF13426 PAS domain 279 381 3.4E-16 T 11-10-2018 IPR000014 PAS domain Patl_3604 86394777f4a1ca9539a468f281192452 1172 Pfam PF13426 PAS domain 407 519 3.3E-8 T 11-10-2018 IPR000014 PAS domain Patl_3604 86394777f4a1ca9539a468f281192452 1172 Pfam PF13426 PAS domain 25 111 7.6E-4 T 11-10-2018 IPR000014 PAS domain Patl_3604 86394777f4a1ca9539a468f281192452 1172 SUPERFAMILY SSF52172 1049 1171 7.12E-37 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3604 86394777f4a1ca9539a468f281192452 1172 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 772 881 3.0E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3604 86394777f4a1ca9539a468f281192452 1172 Gene3D G3DSA:3.30.450.20 544 648 4.8E-15 T 11-10-2018 Patl_3604 86394777f4a1ca9539a468f281192452 1172 SUPERFAMILY SSF47384 645 725 1.26E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_3604 86394777f4a1ca9539a468f281192452 1172 SMART SM00086 605 646 6.7 T 11-10-2018 IPR001610 PAC motif Patl_3604 86394777f4a1ca9539a468f281192452 1172 SMART SM00086 478 520 0.062 T 11-10-2018 IPR001610 PAC motif Patl_3604 86394777f4a1ca9539a468f281192452 1172 SMART SM00086 211 253 0.11 T 11-10-2018 IPR001610 PAC motif Patl_3604 86394777f4a1ca9539a468f281192452 1172 SMART SM00086 341 382 1.7E-8 T 11-10-2018 IPR001610 PAC motif Patl_3604 86394777f4a1ca9539a468f281192452 1172 SMART SM00387 771 883 4.1E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3604 86394777f4a1ca9539a468f281192452 1172 SUPERFAMILY SSF55785 14 117 2.09E-6 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3604 86394777f4a1ca9539a468f281192452 1172 PRINTS PR00344 Bacterial sensor protein C-terminal signature 826 836 2.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3604 86394777f4a1ca9539a468f281192452 1172 PRINTS PR00344 Bacterial sensor protein C-terminal signature 843 861 2.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3604 86394777f4a1ca9539a468f281192452 1172 PRINTS PR00344 Bacterial sensor protein C-terminal signature 808 822 2.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3604 86394777f4a1ca9539a468f281192452 1172 PRINTS PR00344 Bacterial sensor protein C-terminal signature 867 880 2.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3604 86394777f4a1ca9539a468f281192452 1172 SUPERFAMILY SSF55874 713 879 1.28E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3604 86394777f4a1ca9539a468f281192452 1172 Pfam PF00072 Response regulator receiver domain 904 1019 1.5E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3604 86394777f4a1ca9539a468f281192452 1172 Pfam PF00072 Response regulator receiver domain 1051 1166 7.4E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3604 86394777f4a1ca9539a468f281192452 1172 Gene3D G3DSA:3.30.565.10 726 883 7.2E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3604 86394777f4a1ca9539a468f281192452 1172 Pfam PF00512 His Kinase A (phospho-acceptor) domain 659 724 7.6E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3604 86394777f4a1ca9539a468f281192452 1172 SUPERFAMILY SSF55785 379 518 3.14E-15 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3604 86394777f4a1ca9539a468f281192452 1172 SUPERFAMILY SSF55785 146 255 5.06E-15 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3604 86394777f4a1ca9539a468f281192452 1172 Gene3D G3DSA:1.10.287.130 649 725 6.9E-26 T 11-10-2018 Patl_3604 86394777f4a1ca9539a468f281192452 1172 Gene3D G3DSA:3.30.450.20 137 204 8.7E-14 T 11-10-2018 Patl_3604 86394777f4a1ca9539a468f281192452 1172 Gene3D G3DSA:3.30.450.20 264 394 9.2E-35 T 11-10-2018 Patl_3604 86394777f4a1ca9539a468f281192452 1172 Gene3D G3DSA:3.30.450.20 13 120 4.5E-6 T 11-10-2018 Patl_3604 86394777f4a1ca9539a468f281192452 1172 SMART SM00091 137 205 2.1 T 11-10-2018 IPR000014 PAS domain Patl_3604 86394777f4a1ca9539a468f281192452 1172 SMART SM00091 394 462 5.7E-7 T 11-10-2018 IPR000014 PAS domain Patl_3604 86394777f4a1ca9539a468f281192452 1172 SMART SM00091 8 74 3.6 T 11-10-2018 IPR000014 PAS domain Patl_3604 86394777f4a1ca9539a468f281192452 1172 SMART SM00091 268 335 5.5E-4 T 11-10-2018 IPR000014 PAS domain Patl_3604 86394777f4a1ca9539a468f281192452 1172 SMART SM00448 902 1020 1.2E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3604 86394777f4a1ca9539a468f281192452 1172 SMART SM00448 1049 1167 1.8E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3604 86394777f4a1ca9539a468f281192452 1172 SUPERFAMILY SSF55785 278 382 1.93E-22 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3604 86394777f4a1ca9539a468f281192452 1172 Gene3D G3DSA:2.10.70.100 208 255 6.3E-8 T 11-10-2018 Patl_3604 86394777f4a1ca9539a468f281192452 1172 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 389 2.2E-19 T 11-10-2018 IPR000014 PAS domain Patl_3604 86394777f4a1ca9539a468f281192452 1172 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 397 526 6.9E-10 T 11-10-2018 IPR000014 PAS domain Patl_3604 86394777f4a1ca9539a468f281192452 1172 SUPERFAMILY SSF55785 539 649 8.55E-14 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3604 86394777f4a1ca9539a468f281192452 1172 SUPERFAMILY SSF52172 901 1025 7.4E-22 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2926 57a7adfe11287d6d0c776f2b23cc83c4 535 SUPERFAMILY SSF52096 237 517 1.24E-88 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_2926 57a7adfe11287d6d0c776f2b23cc83c4 535 Gene3D G3DSA:3.90.226.10 2 271 1.9E-96 T 11-10-2018 Patl_2926 57a7adfe11287d6d0c776f2b23cc83c4 535 SUPERFAMILY SSF52096 24 268 6.83E-70 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_2926 57a7adfe11287d6d0c776f2b23cc83c4 535 Pfam PF01039 Carboxyl transferase domain 48 526 6.1E-156 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Patl_2926 57a7adfe11287d6d0c776f2b23cc83c4 535 Gene3D G3DSA:3.90.226.10 274 535 6.1E-107 T 11-10-2018 Patl_0142 c87b028f9ad22120383ca2af9a6f7805 153 Pfam PF11736 Protein of unknown function (DUF3299) 25 149 2.4E-43 T 11-10-2018 IPR021727 Protein of unknown function DUF3299 Patl_0142 c87b028f9ad22120383ca2af9a6f7805 153 Gene3D G3DSA:2.40.50.870 18 153 7.7E-49 T 11-10-2018 Patl_2591 57f150ecd350de84fc3849b5c565fe66 714 Gene3D G3DSA:3.40.50.300 3 212 6.5E-13 T 11-10-2018 Patl_2591 57f150ecd350de84fc3849b5c565fe66 714 Gene3D G3DSA:3.40.50.10750 529 682 1.6E-131 T 11-10-2018 Patl_2591 57f150ecd350de84fc3849b5c565fe66 714 SUPERFAMILY SSF75138 229 352 2.35E-25 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Patl_2591 57f150ecd350de84fc3849b5c565fe66 714 SUPERFAMILY SSF53659 394 710 1.56E-90 T 11-10-2018 Patl_2591 57f150ecd350de84fc3849b5c565fe66 714 Gene3D G3DSA:3.40.50.10950 398 709 1.6E-131 T 11-10-2018 Patl_2591 57f150ecd350de84fc3849b5c565fe66 714 Pfam PF07085 DRTGG domain 233 342 3.3E-28 T 11-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Patl_2591 57f150ecd350de84fc3849b5c565fe66 714 Pfam PF13500 AAA domain 3 229 9.5E-30 T 11-10-2018 Patl_2591 57f150ecd350de84fc3849b5c565fe66 714 Gene3D G3DSA:3.40.1390.20 224 363 4.4E-18 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily Patl_2591 57f150ecd350de84fc3849b5c565fe66 714 PIRSF PIRSF006107 1 714 0.0 T 11-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Patl_2591 57f150ecd350de84fc3849b5c565fe66 714 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 4.4E-129 T 11-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Patl_2591 57f150ecd350de84fc3849b5c565fe66 714 Pfam PF01515 Phosphate acetyl/butaryl transferase 394 706 3.9E-121 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Patl_2591 57f150ecd350de84fc3849b5c565fe66 714 SUPERFAMILY SSF52540 1 240 9.56E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3733 a16da937693317666c0808efdaf7f238 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 67 4.8E-28 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_3733 a16da937693317666c0808efdaf7f238 68 Gene3D G3DSA:2.40.50.140 2 66 1.4E-28 T 11-10-2018 Patl_3733 a16da937693317666c0808efdaf7f238 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-10-2018 IPR019844 Cold-shock conserved site Patl_3733 a16da937693317666c0808efdaf7f238 68 SMART SM00357 3 68 3.4E-27 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Patl_3733 a16da937693317666c0808efdaf7f238 68 PRINTS PR00050 Cold shock protein signature 4 19 1.1E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_3733 a16da937693317666c0808efdaf7f238 68 PRINTS PR00050 Cold shock protein signature 25 34 1.1E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_3733 a16da937693317666c0808efdaf7f238 68 PRINTS PR00050 Cold shock protein signature 41 59 1.1E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_3733 a16da937693317666c0808efdaf7f238 68 SUPERFAMILY SSF50249 1 67 9.21E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_3733 a16da937693317666c0808efdaf7f238 68 PIRSF PIRSF002599 1 68 2.5E-23 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 Patl_2213 eb9109535786af684aa200392407def8 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 2.5E-28 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Patl_2213 eb9109535786af684aa200392407def8 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Patl_2213 eb9109535786af684aa200392407def8 158 Gene3D G3DSA:1.10.287.180 1 75 2.5E-32 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Patl_2213 eb9109535786af684aa200392407def8 158 PIRSF PIRSF006092 1 158 6.0E-55 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Patl_2213 eb9109535786af684aa200392407def8 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 1.8E-59 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 Patl_2213 eb9109535786af684aa200392407def8 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Patl_2213 eb9109535786af684aa200392407def8 158 Gene3D G3DSA:3.10.50.30 76 158 8.5E-32 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Patl_2213 eb9109535786af684aa200392407def8 158 SUPERFAMILY SSF46557 3 78 6.54E-29 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Patl_2213 eb9109535786af684aa200392407def8 158 SUPERFAMILY SSF54534 81 157 2.22E-24 T 11-10-2018 Patl_2213 eb9109535786af684aa200392407def8 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 9.1E-32 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Patl_2213 eb9109535786af684aa200392407def8 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.73 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Patl_3753 84d9fcba9ca23cfedcdafcf1a8676890 548 SUPERFAMILY SSF48592 7 521 4.12E-77 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily Patl_3753 84d9fcba9ca23cfedcdafcf1a8676890 548 Gene3D G3DSA:3.30.260.10 136 410 4.7E-238 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Patl_3753 84d9fcba9ca23cfedcdafcf1a8676890 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Patl_3753 84d9fcba9ca23cfedcdafcf1a8676890 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Patl_3753 84d9fcba9ca23cfedcdafcf1a8676890 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Patl_3753 84d9fcba9ca23cfedcdafcf1a8676890 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Patl_3753 84d9fcba9ca23cfedcdafcf1a8676890 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Patl_3753 84d9fcba9ca23cfedcdafcf1a8676890 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.3E-254 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Patl_3753 84d9fcba9ca23cfedcdafcf1a8676890 548 SUPERFAMILY SSF54849 137 203 4.58E-25 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Patl_3753 84d9fcba9ca23cfedcdafcf1a8676890 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.9E-96 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Patl_3753 84d9fcba9ca23cfedcdafcf1a8676890 548 Gene3D G3DSA:3.50.7.10 192 372 4.7E-238 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily Patl_3753 84d9fcba9ca23cfedcdafcf1a8676890 548 SUPERFAMILY SSF52029 185 376 5.58E-84 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily Patl_3753 84d9fcba9ca23cfedcdafcf1a8676890 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.482 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Patl_3753 84d9fcba9ca23cfedcdafcf1a8676890 548 Gene3D G3DSA:1.10.560.10 8 521 4.7E-238 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily Patl_3753 84d9fcba9ca23cfedcdafcf1a8676890 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Patl_1354 ee2f1530ac2d4d23ba24e01e14952f6b 270 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_1354 ee2f1530ac2d4d23ba24e01e14952f6b 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1354 ee2f1530ac2d4d23ba24e01e14952f6b 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 7.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1354 ee2f1530ac2d4d23ba24e01e14952f6b 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 7.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1354 ee2f1530ac2d4d23ba24e01e14952f6b 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 7.0E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1354 ee2f1530ac2d4d23ba24e01e14952f6b 270 Gene3D G3DSA:3.40.50.720 1 267 1.1E-50 T 11-10-2018 Patl_1354 ee2f1530ac2d4d23ba24e01e14952f6b 270 Pfam PF00106 short chain dehydrogenase 3 198 4.6E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1354 ee2f1530ac2d4d23ba24e01e14952f6b 270 SUPERFAMILY SSF51735 2 241 1.85E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1354 ee2f1530ac2d4d23ba24e01e14952f6b 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.3E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1354 ee2f1530ac2d4d23ba24e01e14952f6b 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.3E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1354 ee2f1530ac2d4d23ba24e01e14952f6b 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.3E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3004 09dbd1466562edb707c50dc82a502943 227 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 3.3E-91 T 11-10-2018 IPR014319 Phage shock protein, PspA Patl_3004 09dbd1466562edb707c50dc82a502943 227 Pfam PF04012 PspA/IM30 family 2 215 6.7E-43 T 11-10-2018 IPR007157 PspA/IM30 Patl_0110 5fa00062f45e35639aecfa54c66fd3a8 70 Hamap MF_00715 Protein SlyX [slyX]. 3 70 14.872 T 11-10-2018 IPR007236 SlyX Patl_0110 5fa00062f45e35639aecfa54c66fd3a8 70 Pfam PF04102 SlyX 5 70 4.1E-22 T 11-10-2018 IPR007236 SlyX Patl_3434 11af4cb44bfd50bd5a39fb685b5b8a75 582 Pfam PF00005 ABC transporter 360 509 5.6E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_3434 11af4cb44bfd50bd5a39fb685b5b8a75 582 SUPERFAMILY SSF52540 334 580 1.04E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3434 11af4cb44bfd50bd5a39fb685b5b8a75 582 SMART SM00382 369 555 9.1E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3434 11af4cb44bfd50bd5a39fb685b5b8a75 582 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 7 580 9.6E-249 T 11-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein Patl_3434 11af4cb44bfd50bd5a39fb685b5b8a75 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_3434 11af4cb44bfd50bd5a39fb685b5b8a75 582 Gene3D G3DSA:3.40.50.300 333 581 1.1E-90 T 11-10-2018 Patl_3434 11af4cb44bfd50bd5a39fb685b5b8a75 582 Pfam PF00664 ABC transporter transmembrane region 26 289 5.5E-49 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Patl_3434 11af4cb44bfd50bd5a39fb685b5b8a75 582 SUPERFAMILY SSF90123 11 328 1.31E-72 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Patl_3434 11af4cb44bfd50bd5a39fb685b5b8a75 582 Gene3D G3DSA:1.20.1560.10 2 328 2.9E-81 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Patl_2123 18ab573be489a067164622834da3d36b 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 292 1.8E-118 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Patl_2123 18ab573be489a067164622834da3d36b 309 SUPERFAMILY SSF55048 130 195 1.96E-15 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Patl_2123 18ab573be489a067164622834da3d36b 309 PIRSF PIRSF000446 1 309 1.0E-122 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Patl_2123 18ab573be489a067164622834da3d36b 309 Gene3D G3DSA:3.30.70.250 125 199 1.7E-97 T 11-10-2018 Patl_2123 18ab573be489a067164622834da3d36b 309 Pfam PF00698 Acyl transferase domain 6 293 1.4E-36 T 11-10-2018 IPR014043 Acyl transferase Patl_2123 18ab573be489a067164622834da3d36b 309 Gene3D G3DSA:3.40.366.10 6 288 1.7E-97 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Patl_2123 18ab573be489a067164622834da3d36b 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 309 9.7E-31 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Patl_2123 18ab573be489a067164622834da3d36b 309 SUPERFAMILY SSF52151 4 305 6.02E-77 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Patl_3485 67282f333f6d8ad6897e284f90f068fe 241 Gene3D G3DSA:3.20.20.190 1 232 4.1E-61 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Patl_3485 67282f333f6d8ad6897e284f90f068fe 241 SUPERFAMILY SSF51695 1 224 3.56E-60 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Patl_3485 67282f333f6d8ad6897e284f90f068fe 241 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 222 4.2E-30 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Patl_3822 1884caa28d8f46f43c816aa5cadd7d77 443 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 3 429 7.0E-104 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_3822 1884caa28d8f46f43c816aa5cadd7d77 443 ProSitePatterns PS00216 Sugar transport proteins signature 1. 294 311 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Patl_3822 1884caa28d8f46f43c816aa5cadd7d77 443 Gene3D G3DSA:1.20.1250.20 217 443 4.9E-58 T 11-10-2018 Patl_3822 1884caa28d8f46f43c816aa5cadd7d77 443 Pfam PF00083 Sugar (and other) transporter 8 432 6.6E-105 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Patl_3822 1884caa28d8f46f43c816aa5cadd7d77 443 PRINTS PR00171 Sugar transporter signature 99 118 2.2E-21 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_3822 1884caa28d8f46f43c816aa5cadd7d77 443 PRINTS PR00171 Sugar transporter signature 15 25 2.2E-21 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_3822 1884caa28d8f46f43c816aa5cadd7d77 443 PRINTS PR00171 Sugar transporter signature 335 356 2.2E-21 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_3822 1884caa28d8f46f43c816aa5cadd7d77 443 PRINTS PR00171 Sugar transporter signature 358 370 2.2E-21 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_3822 1884caa28d8f46f43c816aa5cadd7d77 443 PRINTS PR00171 Sugar transporter signature 250 260 2.2E-21 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_3822 1884caa28d8f46f43c816aa5cadd7d77 443 Gene3D G3DSA:1.20.1250.20 2 216 2.1E-52 T 11-10-2018 Patl_3822 1884caa28d8f46f43c816aa5cadd7d77 443 ProSitePatterns PS00217 Sugar transport proteins signature 2. 104 129 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Patl_3822 1884caa28d8f46f43c816aa5cadd7d77 443 SUPERFAMILY SSF103473 8 429 2.62E-65 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_1110 58f81bcf6e68b0769b396e54aa721a70 625 Gene3D G3DSA:2.40.170.20 173 625 2.0E-90 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_1110 58f81bcf6e68b0769b396e54aa721a70 625 Gene3D G3DSA:2.170.130.10 42 168 1.1E-26 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_1110 58f81bcf6e68b0769b396e54aa721a70 625 Pfam PF00593 TonB dependent receptor 189 622 1.7E-38 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1110 58f81bcf6e68b0769b396e54aa721a70 625 SUPERFAMILY SSF56935 46 625 1.45E-101 T 11-10-2018 Patl_1110 58f81bcf6e68b0769b396e54aa721a70 625 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 162 2.8E-21 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1079 1c910de971270cef9661fff6cae3a26b 663 SMART SM00267 227 396 8.7E-20 T 11-10-2018 IPR000160 GGDEF domain Patl_1079 1c910de971270cef9661fff6cae3a26b 663 SMART SM00304 173 225 1.8E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_1079 1c910de971270cef9661fff6cae3a26b 663 Gene3D G3DSA:3.30.1040.50 103 153 1.7E-16 T 11-10-2018 Patl_1079 1c910de971270cef9661fff6cae3a26b 663 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 237 386 5.0E-16 T 11-10-2018 IPR000160 GGDEF domain Patl_1079 1c910de971270cef9661fff6cae3a26b 663 Pfam PF00563 EAL domain 410 659 2.5E-48 T 11-10-2018 IPR001633 EAL domain Patl_1079 1c910de971270cef9661fff6cae3a26b 663 Pfam PF16448 LapD/MoxY periplasmic domain 24 147 2.4E-43 T 11-10-2018 IPR032244 LapD/MoxY, periplasmic domain Patl_1079 1c910de971270cef9661fff6cae3a26b 663 SUPERFAMILY SSF141868 411 660 3.27E-46 T 11-10-2018 IPR035919 EAL domain superfamily Patl_1079 1c910de971270cef9661fff6cae3a26b 663 Gene3D G3DSA:3.20.20.450 403 663 4.6E-47 T 11-10-2018 IPR035919 EAL domain superfamily Patl_1079 1c910de971270cef9661fff6cae3a26b 663 Gene3D G3DSA:3.30.70.270 221 395 3.1E-31 T 11-10-2018 Patl_1079 1c910de971270cef9661fff6cae3a26b 663 SMART SM00052 404 662 6.5E-19 T 11-10-2018 IPR001633 EAL domain Patl_1079 1c910de971270cef9661fff6cae3a26b 663 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 385 2.3E-22 T 11-10-2018 IPR000160 GGDEF domain Patl_1079 1c910de971270cef9661fff6cae3a26b 663 SUPERFAMILY SSF55073 243 385 2.67E-19 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3220 bf111da342acc7d202f33e87a5f9f0a2 673 Gene3D G3DSA:3.40.50.2000 486 657 5.3E-13 T 11-10-2018 Patl_3220 bf111da342acc7d202f33e87a5f9f0a2 673 SUPERFAMILY SSF53756 437 668 2.2E-15 T 11-10-2018 Patl_3220 bf111da342acc7d202f33e87a5f9f0a2 673 SUPERFAMILY SSF52540 6 218 3.65E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3220 bf111da342acc7d202f33e87a5f9f0a2 673 Pfam PF13524 Glycosyl transferases group 1 586 657 5.1E-9 T 11-10-2018 Patl_3220 bf111da342acc7d202f33e87a5f9f0a2 673 Gene3D G3DSA:3.40.50.300 2 220 7.5E-9 T 11-10-2018 Patl_2402 437a7230e2a1373c5c0ceb892cb68ec3 724 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 165 2.7E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_2402 437a7230e2a1373c5c0ceb892cb68ec3 724 Pfam PF00593 TonB dependent receptor 220 723 1.3E-28 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_2402 437a7230e2a1373c5c0ceb892cb68ec3 724 Gene3D G3DSA:2.170.130.10 38 172 8.1E-24 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_2402 437a7230e2a1373c5c0ceb892cb68ec3 724 SUPERFAMILY SSF56935 41 724 5.01E-86 T 11-10-2018 Patl_2402 437a7230e2a1373c5c0ceb892cb68ec3 724 Gene3D G3DSA:2.40.170.20 191 724 2.5E-59 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_0235 7a8732fd293b36b50e76bf5a0ba916e9 202 PRINTS PR00885 Bacterial general secretion pathway protein H signature 152 167 1.3E-16 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 Patl_0235 7a8732fd293b36b50e76bf5a0ba916e9 202 PRINTS PR00885 Bacterial general secretion pathway protein H signature 18 32 1.3E-16 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 Patl_0235 7a8732fd293b36b50e76bf5a0ba916e9 202 PRINTS PR00885 Bacterial general secretion pathway protein H signature 3 17 1.3E-16 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 Patl_0235 7a8732fd293b36b50e76bf5a0ba916e9 202 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.2E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0235 7a8732fd293b36b50e76bf5a0ba916e9 202 Gene3D G3DSA:3.55.40.10 35 202 6.0E-44 T 11-10-2018 Patl_0235 7a8732fd293b36b50e76bf5a0ba916e9 202 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0235 7a8732fd293b36b50e76bf5a0ba916e9 202 Pfam PF12019 Type II transport protein GspH 43 187 2.8E-4 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 Patl_0235 7a8732fd293b36b50e76bf5a0ba916e9 202 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 5 169 2.6E-16 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 Patl_0235 7a8732fd293b36b50e76bf5a0ba916e9 202 SUPERFAMILY SSF54523 8 81 7.22E-12 T 11-10-2018 Patl_0235 7a8732fd293b36b50e76bf5a0ba916e9 202 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 1.3E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_2613 ae9d6df95eb1604d57cb99f27536d53a 415 SUPERFAMILY SSF52151 17 233 9.94E-35 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Patl_2613 ae9d6df95eb1604d57cb99f27536d53a 415 Pfam PF01734 Patatin-like phospholipase 24 217 1.5E-11 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Patl_2613 ae9d6df95eb1604d57cb99f27536d53a 415 Gene3D G3DSA:3.40.1090.10 4 91 4.8E-12 T 11-10-2018 Patl_2613 ae9d6df95eb1604d57cb99f27536d53a 415 Gene3D G3DSA:3.40.1090.10 96 270 1.0E-7 T 11-10-2018 Patl_2593 b8f7e7e3ff28e0a54fccec61086014a5 227 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 70 4.2E-18 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Patl_2593 b8f7e7e3ff28e0a54fccec61086014a5 227 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 95 213 2.8E-19 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Patl_2593 b8f7e7e3ff28e0a54fccec61086014a5 227 Gene3D G3DSA:3.40.50.1240 2 227 1.3E-63 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Patl_2593 b8f7e7e3ff28e0a54fccec61086014a5 227 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 226 35.724 T 11-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 Patl_2593 b8f7e7e3ff28e0a54fccec61086014a5 227 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Patl_2593 b8f7e7e3ff28e0a54fccec61086014a5 227 SUPERFAMILY SSF53254 1 215 1.2E-54 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Patl_2593 b8f7e7e3ff28e0a54fccec61086014a5 227 SMART SM00855 3 187 1.3E-22 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Patl_2593 b8f7e7e3ff28e0a54fccec61086014a5 227 PIRSF PIRSF000709 3 82 5.8E-4 T 11-10-2018 Patl_2593 b8f7e7e3ff28e0a54fccec61086014a5 227 PIRSF PIRSF000709 92 213 15.0 T 11-10-2018 Patl_0022 948a39a9ca21b60f42881822ef86da8f 315 Pfam PF00551 Formyl transferase 6 183 4.3E-48 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Patl_0022 948a39a9ca21b60f42881822ef86da8f 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 309 3.8E-101 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Patl_0022 948a39a9ca21b60f42881822ef86da8f 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 36.741 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Patl_0022 948a39a9ca21b60f42881822ef86da8f 315 Gene3D G3DSA:3.10.25.10 208 314 1.6E-33 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Patl_0022 948a39a9ca21b60f42881822ef86da8f 315 Pfam PF02911 Formyl transferase, C-terminal domain 205 304 5.8E-27 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Patl_0022 948a39a9ca21b60f42881822ef86da8f 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Patl_0022 948a39a9ca21b60f42881822ef86da8f 315 SUPERFAMILY SSF50486 206 310 8.79E-31 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Patl_0022 948a39a9ca21b60f42881822ef86da8f 315 SUPERFAMILY SSF53328 5 208 4.97E-64 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Patl_0022 948a39a9ca21b60f42881822ef86da8f 315 Gene3D G3DSA:3.40.50.170 1 207 4.0E-83 T 11-10-2018 Patl_4304 5e6f7cfbcbe09e71cfa2f9525e2d4d89 278 Gene3D G3DSA:3.40.50.300 14 277 7.2E-77 T 11-10-2018 Patl_4304 5e6f7cfbcbe09e71cfa2f9525e2d4d89 278 Pfam PF13614 AAA domain 18 194 3.1E-63 T 11-10-2018 IPR025669 AAA domain Patl_4304 5e6f7cfbcbe09e71cfa2f9525e2d4d89 278 SUPERFAMILY SSF52540 18 270 2.58E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0784 36f70110f7bc5bcabe8177284117658a 499 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 45 158 5.6E-11 T 11-10-2018 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 Patl_0784 36f70110f7bc5bcabe8177284117658a 499 SUPERFAMILY SSF49363 35 160 5.1E-7 T 11-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 Patl_0784 36f70110f7bc5bcabe8177284117658a 499 Gene3D G3DSA:3.60.21.10 163 457 8.9E-36 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Patl_0784 36f70110f7bc5bcabe8177284117658a 499 Pfam PF00149 Calcineurin-like phosphoesterase 168 372 3.4E-14 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Patl_0784 36f70110f7bc5bcabe8177284117658a 499 SUPERFAMILY SSF56300 167 466 1.18E-51 T 11-10-2018 Patl_4067 a8c5617f36404599f3638b69d6406ce8 182 PIRSF PIRSF038996 5 180 3.9E-55 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 Patl_4067 a8c5617f36404599f3638b69d6406ce8 182 TIGRFAM TIGR01752 flav_long: flavodoxin 7 177 2.2E-62 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 Patl_4067 a8c5617f36404599f3638b69d6406ce8 182 Gene3D G3DSA:3.40.50.360 6 181 7.6E-49 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_4067 a8c5617f36404599f3638b69d6406ce8 182 Pfam PF00258 Flavodoxin 10 169 1.0E-27 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Patl_4067 a8c5617f36404599f3638b69d6406ce8 182 ProSitePatterns PS00201 Flavodoxin signature. 10 26 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 Patl_4067 a8c5617f36404599f3638b69d6406ce8 182 SUPERFAMILY SSF52218 7 174 2.51E-46 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_1812 cecb514be44eae58b2c7cd1be288305d 408 Gene3D G3DSA:1.10.540.10 1 137 6.4E-56 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Patl_1812 cecb514be44eae58b2c7cd1be288305d 408 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 139 240 2.0E-17 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Patl_1812 cecb514be44eae58b2c7cd1be288305d 408 Gene3D G3DSA:1.20.140.10 253 408 3.1E-37 T 11-10-2018 Patl_1812 cecb514be44eae58b2c7cd1be288305d 408 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 134 1.3E-16 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Patl_1812 cecb514be44eae58b2c7cd1be288305d 408 SUPERFAMILY SSF56645 1 265 7.07E-67 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_1812 cecb514be44eae58b2c7cd1be288305d 408 Gene3D G3DSA:2.40.110.10 138 252 2.8E-46 T 11-10-2018 Patl_1812 cecb514be44eae58b2c7cd1be288305d 408 SUPERFAMILY SSF47203 250 405 9.99E-43 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_1812 cecb514be44eae58b2c7cd1be288305d 408 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 252 402 4.0E-35 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_0460 7add0e6978dcaf180de438d4f3c56cdb 356 Pfam PF11798 IMS family HHH motif 166 197 1.4E-5 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Patl_0460 7add0e6978dcaf180de438d4f3c56cdb 356 Gene3D G3DSA:2.30.40.20 21 73 5.8E-64 T 11-10-2018 Patl_0460 7add0e6978dcaf180de438d4f3c56cdb 356 Gene3D G3DSA:3.30.1490.100 237 350 2.3E-26 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Patl_0460 7add0e6978dcaf180de438d4f3c56cdb 356 Gene3D G3DSA:1.10.150.20 175 229 2.6E-15 T 11-10-2018 Patl_0460 7add0e6978dcaf180de438d4f3c56cdb 356 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 336 1.1E-5 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Patl_0460 7add0e6978dcaf180de438d4f3c56cdb 356 SUPERFAMILY SSF56672 1 233 5.34E-90 T 11-10-2018 Patl_0460 7add0e6978dcaf180de438d4f3c56cdb 356 Gene3D G3DSA:3.30.70.270 4 164 5.8E-64 T 11-10-2018 Patl_0460 7add0e6978dcaf180de438d4f3c56cdb 356 Hamap MF_01113 DNA polymerase IV [dinB]. 1 348 35.555 T 11-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Patl_0460 7add0e6978dcaf180de438d4f3c56cdb 356 SUPERFAMILY SSF100879 241 349 2.16E-24 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Patl_0460 7add0e6978dcaf180de438d4f3c56cdb 356 Pfam PF00817 impB/mucB/samB family 7 154 4.4E-49 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Patl_3163 105b1cbf07a12a60f11ab9197727a054 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 17 270 3.4E-66 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Patl_3163 105b1cbf07a12a60f11ab9197727a054 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 274 45.343 T 11-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 Patl_3163 105b1cbf07a12a60f11ab9197727a054 276 SUPERFAMILY SSF52402 2 276 2.3E-78 T 11-10-2018 Patl_3163 105b1cbf07a12a60f11ab9197727a054 276 Gene3D G3DSA:3.40.50.620 1 276 9.2E-79 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_3163 105b1cbf07a12a60f11ab9197727a054 276 Pfam PF02540 NAD synthase 22 268 3.1E-64 T 11-10-2018 IPR022310 NAD/GMP synthase Patl_3671 24b04cc231ef8c89aa46a2d03691b1d0 277 Pfam PF00924 Mechanosensitive ion channel 66 262 7.7E-49 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Patl_3671 24b04cc231ef8c89aa46a2d03691b1d0 277 SUPERFAMILY SSF82861 24 107 7.85E-17 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Patl_3671 24b04cc231ef8c89aa46a2d03691b1d0 277 Gene3D G3DSA:2.30.30.60 124 173 2.4E-17 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Patl_3671 24b04cc231ef8c89aa46a2d03691b1d0 277 SUPERFAMILY SSF50182 109 174 3.27E-16 T 11-10-2018 IPR010920 LSM domain superfamily Patl_3671 24b04cc231ef8c89aa46a2d03691b1d0 277 SUPERFAMILY SSF82689 177 274 1.83E-25 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Patl_3671 24b04cc231ef8c89aa46a2d03691b1d0 277 Gene3D G3DSA:3.30.70.100 176 267 1.5E-19 T 11-10-2018 Patl_2960 6ce71e3dd0b32b992b9dd78a300fd8e7 248 Gene3D G3DSA:3.20.20.70 25 248 4.1E-53 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2960 6ce71e3dd0b32b992b9dd78a300fd8e7 248 Pfam PF13394 4Fe-4S single cluster domain 47 151 8.7E-14 T 11-10-2018 Patl_2960 6ce71e3dd0b32b992b9dd78a300fd8e7 248 PIRSF PIRSF000370 24 248 5.2E-64 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Patl_2960 6ce71e3dd0b32b992b9dd78a300fd8e7 248 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 32 248 5.3E-104 T 11-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Patl_2960 6ce71e3dd0b32b992b9dd78a300fd8e7 248 SUPERFAMILY SSF102114 46 144 1.96E-6 T 11-10-2018 Patl_2960 6ce71e3dd0b32b992b9dd78a300fd8e7 248 Pfam PF04055 Radical SAM superfamily 50 147 1.6E-10 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Patl_2960 6ce71e3dd0b32b992b9dd78a300fd8e7 248 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 26 248 33.8 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 Patl_0632 748fc14521d6f42374cb47584fce11b8 249 Pfam PF00106 short chain dehydrogenase 4 197 3.6E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0632 748fc14521d6f42374cb47584fce11b8 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.5E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0632 748fc14521d6f42374cb47584fce11b8 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.5E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0632 748fc14521d6f42374cb47584fce11b8 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.5E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0632 748fc14521d6f42374cb47584fce11b8 249 SUPERFAMILY SSF51735 2 235 1.62E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0632 748fc14521d6f42374cb47584fce11b8 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_0632 748fc14521d6f42374cb47584fce11b8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.5E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0632 748fc14521d6f42374cb47584fce11b8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.5E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0632 748fc14521d6f42374cb47584fce11b8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.5E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0632 748fc14521d6f42374cb47584fce11b8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.5E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0632 748fc14521d6f42374cb47584fce11b8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.5E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0632 748fc14521d6f42374cb47584fce11b8 249 Gene3D G3DSA:3.40.50.720 1 247 8.6E-42 T 11-10-2018 Patl_0229 40ec786a12a09f5f970f65ef7bbd110d 231 Pfam PF00106 short chain dehydrogenase 2 193 1.2E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0229 40ec786a12a09f5f970f65ef7bbd110d 231 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 188 0.0072 T 11-10-2018 Patl_0229 40ec786a12a09f5f970f65ef7bbd110d 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 9.4E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0229 40ec786a12a09f5f970f65ef7bbd110d 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 9.4E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0229 40ec786a12a09f5f970f65ef7bbd110d 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 9.4E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0229 40ec786a12a09f5f970f65ef7bbd110d 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 9.4E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0229 40ec786a12a09f5f970f65ef7bbd110d 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.3E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0229 40ec786a12a09f5f970f65ef7bbd110d 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.3E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0229 40ec786a12a09f5f970f65ef7bbd110d 231 Gene3D G3DSA:3.40.50.720 1 231 1.4E-59 T 11-10-2018 Patl_0229 40ec786a12a09f5f970f65ef7bbd110d 231 SUPERFAMILY SSF51735 1 231 2.27E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2221 e62df8882f474be0a4e1eebed975fbf5 283 SMART SM00450 12 135 2.3E-9 T 11-10-2018 IPR001763 Rhodanese-like domain Patl_2221 e62df8882f474be0a4e1eebed975fbf5 283 SMART SM00450 159 279 2.1E-16 T 11-10-2018 IPR001763 Rhodanese-like domain Patl_2221 e62df8882f474be0a4e1eebed975fbf5 283 Gene3D G3DSA:3.40.250.10 1 149 1.6E-39 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Patl_2221 e62df8882f474be0a4e1eebed975fbf5 283 Gene3D G3DSA:3.40.250.10 165 283 1.4E-36 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Patl_2221 e62df8882f474be0a4e1eebed975fbf5 283 SUPERFAMILY SSF52821 8 138 3.4E-32 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Patl_2221 e62df8882f474be0a4e1eebed975fbf5 283 SUPERFAMILY SSF52821 163 282 1.57E-32 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Patl_2221 e62df8882f474be0a4e1eebed975fbf5 283 Pfam PF00581 Rhodanese-like domain 47 131 6.9E-11 T 11-10-2018 IPR001763 Rhodanese-like domain Patl_2221 e62df8882f474be0a4e1eebed975fbf5 283 Pfam PF00581 Rhodanese-like domain 164 275 2.6E-10 T 11-10-2018 IPR001763 Rhodanese-like domain Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 SUPERFAMILY SSF47384 850 930 7.06E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1059 1077 1.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1042 1052 1.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1024 1038 1.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1083 1096 1.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Pfam PF07495 Y_Y_Y domain 720 783 9.9E-18 T 11-10-2018 IPR011123 Two component regulator three Y Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 976 1098 8.0E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Pfam PF00072 Response regulator receiver domain 1237 1346 8.6E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 SUPERFAMILY SSF55874 918 1096 2.62E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Gene3D G3DSA:1.10.287.130 816 927 2.3E-26 T 11-10-2018 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 SUPERFAMILY SSF63829 543 668 1.57E-7 T 11-10-2018 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Pfam PF00512 His Kinase A (phospho-acceptor) domain 865 929 4.3E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 SUPERFAMILY SSF63829 237 496 3.27E-14 T 11-10-2018 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Gene3D G3DSA:1.20.120.160 1374 1495 1.6E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Gene3D G3DSA:2.130.10.10 72 346 5.8E-59 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Gene3D G3DSA:2.130.10.10 5 71 1.2E-6 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Gene3D G3DSA:2.130.10.10 347 670 2.4E-68 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Gene3D G3DSA:2.60.40.10 671 796 6.2E-36 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 SUPERFAMILY SSF52172 1235 1357 3.42E-37 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 SMART SM00073 1395 1495 0.0021 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Gene3D G3DSA:3.40.50.2300 1221 1356 1.5E-37 T 11-10-2018 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Gene3D G3DSA:3.30.565.10 928 1103 2.3E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Pfam PF07494 Two component regulator propeller 82 105 0.0012 T 11-10-2018 IPR011110 Two component regulator propeller Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Pfam PF07494 Two component regulator propeller 448 471 0.0021 T 11-10-2018 IPR011110 Two component regulator propeller Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Pfam PF07494 Two component regulator propeller 271 293 0.0066 T 11-10-2018 IPR011110 Two component regulator propeller Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Pfam PF07494 Two component regulator propeller 592 614 0.0049 T 11-10-2018 IPR011110 Two component regulator propeller Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Pfam PF07494 Two component regulator propeller 313 336 4.6E-4 T 11-10-2018 IPR011110 Two component regulator propeller Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 SMART SM00387 976 1099 2.2E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 SUPERFAMILY SSF47226 1381 1495 3.4E-21 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 SMART SM00448 1235 1346 4.9E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 Pfam PF01627 Hpt domain 1406 1480 6.6E-9 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 SUPERFAMILY SSF63829 42 337 5.23E-12 T 11-10-2018 Patl_3543 f2a7553e948ae3d3284592b52b427909 1498 SMART SM00388 864 929 1.7E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2479 5a9051f15fea8bd94fd9386c3ee61c05 175 Gene3D G3DSA:3.30.70.260 1 85 3.0E-17 T 11-10-2018 Patl_2479 5a9051f15fea8bd94fd9386c3ee61c05 175 Pfam PF13740 ACT domain 3 77 7.5E-22 T 11-10-2018 Patl_2479 5a9051f15fea8bd94fd9386c3ee61c05 175 PIRSF PIRSF028103 1 175 6.4E-32 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 Patl_2479 5a9051f15fea8bd94fd9386c3ee61c05 175 SUPERFAMILY SSF55021 1 82 2.25E-12 T 11-10-2018 Patl_2479 5a9051f15fea8bd94fd9386c3ee61c05 175 Gene3D G3DSA:3.30.70.260 92 175 4.0E-8 T 11-10-2018 Patl_2479 5a9051f15fea8bd94fd9386c3ee61c05 175 SUPERFAMILY SSF55021 91 172 1.25E-9 T 11-10-2018 Patl_0474 5f4a73377e72d5dd42e485e57f723d9d 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 8.5E-48 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0474 5f4a73377e72d5dd42e485e57f723d9d 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0474 5f4a73377e72d5dd42e485e57f723d9d 110 SUPERFAMILY SSF54843 1 109 7.85E-43 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Patl_0474 5f4a73377e72d5dd42e485e57f723d9d 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.909 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0474 5f4a73377e72d5dd42e485e57f723d9d 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 3.3E-38 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Patl_0474 5f4a73377e72d5dd42e485e57f723d9d 110 Gene3D G3DSA:3.90.470.10 1 110 4.4E-46 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Patl_0850 b45fca7a8e465a4d12904dd9beb4097f 397 SUPERFAMILY SSF51735 163 355 3.18E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0850 b45fca7a8e465a4d12904dd9beb4097f 397 SUPERFAMILY SSF50129 6 188 1.08E-59 T 11-10-2018 IPR011032 GroES-like superfamily Patl_0850 b45fca7a8e465a4d12904dd9beb4097f 397 Gene3D G3DSA:3.90.180.10 36 381 6.9E-137 T 11-10-2018 Patl_0850 b45fca7a8e465a4d12904dd9beb4097f 397 Pfam PF00107 Zinc-binding dehydrogenase 198 267 1.9E-10 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_0850 b45fca7a8e465a4d12904dd9beb4097f 397 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 68 82 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Patl_0850 b45fca7a8e465a4d12904dd9beb4097f 397 Gene3D G3DSA:3.40.50.720 179 344 6.9E-137 T 11-10-2018 Patl_0850 b45fca7a8e465a4d12904dd9beb4097f 397 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 36 145 1.1E-25 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_0850 b45fca7a8e465a4d12904dd9beb4097f 397 TIGRFAM TIGR02819 fdhA_non_GSH: formaldehyde dehydrogenase, glutathione-independent 4 394 2.5E-225 T 11-10-2018 IPR014184 Formaldehyde dehydrogenase, glutathione-independent GO:0016491|GO:0055114 Patl_2488 021840a0ff127474cc9afb5c2ef941ea 370 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 29 275 5.6E-77 T 11-10-2018 IPR018642 Protein of unknown function DUF2066 Patl_3412 280ed36f5c2d32608cb53ab2786a9308 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 290 9.4E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3412 280ed36f5c2d32608cb53ab2786a9308 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 5.6E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3412 280ed36f5c2d32608cb53ab2786a9308 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 5.6E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3412 280ed36f5c2d32608cb53ab2786a9308 471 Gene3D G3DSA:1.10.287.130 177 292 5.1E-29 T 11-10-2018 Patl_3412 280ed36f5c2d32608cb53ab2786a9308 471 Pfam PF00672 HAMP domain 175 224 3.6E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_3412 280ed36f5c2d32608cb53ab2786a9308 471 SUPERFAMILY SSF47384 212 290 1.18E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_3412 280ed36f5c2d32608cb53ab2786a9308 471 SUPERFAMILY SSF55874 281 443 1.28E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3412 280ed36f5c2d32608cb53ab2786a9308 471 SUPERFAMILY SSF158472 175 226 1.44E-7 T 11-10-2018 Patl_3412 280ed36f5c2d32608cb53ab2786a9308 471 Gene3D G3DSA:3.30.450.170 24 145 1.3E-38 T 11-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily Patl_3412 280ed36f5c2d32608cb53ab2786a9308 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 442 7.8E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3412 280ed36f5c2d32608cb53ab2786a9308 471 SMART SM00387 335 465 9.2E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3412 280ed36f5c2d32608cb53ab2786a9308 471 Pfam PF16750 Sensor domain of 2-component histidine kinase 37 144 1.3E-38 T 11-10-2018 IPR031930 2-component histidine kinase, sensor domain Patl_3412 280ed36f5c2d32608cb53ab2786a9308 471 SMART SM00304 173 228 1.2E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_3412 280ed36f5c2d32608cb53ab2786a9308 471 SMART SM00388 229 291 4.6E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3412 280ed36f5c2d32608cb53ab2786a9308 471 Gene3D G3DSA:3.30.565.10 300 469 8.9E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2170 952e99e978e0d427cc09a56f79f901d8 1282 Pfam PF11898 Domain of unknown function (DUF3418) 688 1280 2.4E-206 T 11-10-2018 IPR024590 RNA helicase HrpA, C-terminal Patl_2170 952e99e978e0d427cc09a56f79f901d8 1282 SMART SM00847 443 536 1.7E-31 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 Patl_2170 952e99e978e0d427cc09a56f79f901d8 1282 Pfam PF00271 Helicase conserved C-terminal domain 264 382 1.9E-12 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_2170 952e99e978e0d427cc09a56f79f901d8 1282 SMART SM00382 71 363 2.5E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2170 952e99e978e0d427cc09a56f79f901d8 1282 SMART SM00490 283 383 3.5E-16 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_2170 952e99e978e0d427cc09a56f79f901d8 1282 SMART SM00487 54 238 2.1E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_2170 952e99e978e0d427cc09a56f79f901d8 1282 Pfam PF04408 Helicase associated domain (HA2) 446 533 1.5E-13 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 Patl_2170 952e99e978e0d427cc09a56f79f901d8 1282 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 599 674 1.1E-16 T 11-10-2018 IPR011709 Domain of unknown function DUF1605 Patl_2170 952e99e978e0d427cc09a56f79f901d8 1282 SUPERFAMILY SSF52540 56 566 1.52E-108 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2170 952e99e978e0d427cc09a56f79f901d8 1282 Pfam PF00270 DEAD/DEAH box helicase 61 212 3.4E-7 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Patl_2170 952e99e978e0d427cc09a56f79f901d8 1282 Gene3D G3DSA:1.20.120.1080 426 528 2.7E-15 T 11-10-2018 Patl_2170 952e99e978e0d427cc09a56f79f901d8 1282 Gene3D G3DSA:3.40.50.300 4 231 1.7E-77 T 11-10-2018 Patl_2170 952e99e978e0d427cc09a56f79f901d8 1282 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 1 1279 0.0 T 11-10-2018 IPR010222 RNA helicase HrpA GO:0004004 Patl_2170 952e99e978e0d427cc09a56f79f901d8 1282 Gene3D G3DSA:3.40.50.300 232 401 1.9E-56 T 11-10-2018 Patl_1590 996903a91a4ce720c70d532cdbc50fa5 399 Pfam PF00800 Prephenate dehydratase 111 292 7.3E-55 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Patl_1590 996903a91a4ce720c70d532cdbc50fa5 399 SUPERFAMILY SSF53850 110 294 4.56E-50 T 11-10-2018 Patl_1590 996903a91a4ce720c70d532cdbc50fa5 399 SUPERFAMILY SSF55021 285 382 2.8E-25 T 11-10-2018 Patl_1590 996903a91a4ce720c70d532cdbc50fa5 399 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 330 337 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Patl_1590 996903a91a4ce720c70d532cdbc50fa5 399 SMART SM00830 15 95 2.1E-27 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Patl_1590 996903a91a4ce720c70d532cdbc50fa5 399 PIRSF PIRSF001500 5 385 1.0E-128 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Patl_1590 996903a91a4ce720c70d532cdbc50fa5 399 Gene3D G3DSA:3.30.70.260 296 383 1.7E-26 T 11-10-2018 Patl_1590 996903a91a4ce720c70d532cdbc50fa5 399 SUPERFAMILY SSF48600 10 96 5.13E-23 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Patl_1590 996903a91a4ce720c70d532cdbc50fa5 399 Gene3D G3DSA:1.20.59.10 7 112 4.6E-33 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Patl_1590 996903a91a4ce720c70d532cdbc50fa5 399 Gene3D G3DSA:3.40.190.10 113 286 2.7E-48 T 11-10-2018 Patl_1590 996903a91a4ce720c70d532cdbc50fa5 399 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 12 93 3.6E-26 T 11-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 Patl_1590 996903a91a4ce720c70d532cdbc50fa5 399 Pfam PF01817 Chorismate mutase type II 15 92 5.7E-19 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Patl_1590 996903a91a4ce720c70d532cdbc50fa5 399 Gene3D G3DSA:3.40.190.10 194 279 2.7E-48 T 11-10-2018 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 Gene3D G3DSA:3.40.1110.10 444 564 1.3E-93 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 Pfam PF00702 haloacid dehalogenase-like hydrolase 429 646 1.7E-38 T 11-10-2018 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 Pfam PF00122 E1-E2 ATPase 232 412 1.7E-56 T 11-10-2018 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 632 648 1.2E-8 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 604 620 1.2E-8 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 663 688 1.2E-8 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 SUPERFAMILY SSF56784 433 738 5.44E-55 T 11-10-2018 IPR036412 HAD-like superfamily Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 SUPERFAMILY SSF55008 5 76 2.36E-17 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 204 710 4.5E-87 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 Gene3D G3DSA:2.70.150.20 219 335 2.6E-42 T 11-10-2018 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 Gene3D G3DSA:3.30.70.100 1 80 7.9E-17 T 11-10-2018 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 435 441 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 Pfam PF00403 Heavy-metal-associated domain 12 68 3.9E-13 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 SUPERFAMILY SSF81665 199 720 9.29E-9 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 164 741 1.8E-191 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 146 742 6.6E-188 T 11-10-2018 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 281 295 1.0E-28 T 11-10-2018 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 433 447 1.0E-28 T 11-10-2018 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 579 589 1.0E-28 T 11-10-2018 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 651 1.0E-28 T 11-10-2018 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 568 1.0E-28 T 11-10-2018 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 655 667 1.0E-28 T 11-10-2018 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 SUPERFAMILY SSF81653 234 331 1.09E-28 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Patl_2091 09774fc2db580c82eb7a67429ef5a530 750 Gene3D G3DSA:3.40.50.1000 414 684 1.3E-93 T 11-10-2018 IPR023214 HAD superfamily Patl_3033 d7d3969d6d4d85914a8749fe7b0b890f 700 PIRSF PIRSF005419 5 700 5.9E-242 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Patl_3033 d7d3969d6d4d85914a8749fe7b0b890f 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 7.1E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Patl_3033 d7d3969d6d4d85914a8749fe7b0b890f 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 7.1E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Patl_3033 d7d3969d6d4d85914a8749fe7b0b890f 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 7.1E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Patl_3033 d7d3969d6d4d85914a8749fe7b0b890f 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 7.1E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Patl_3033 d7d3969d6d4d85914a8749fe7b0b890f 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 7.1E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Patl_3033 d7d3969d6d4d85914a8749fe7b0b890f 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 7.1E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Patl_3033 d7d3969d6d4d85914a8749fe7b0b890f 700 Gene3D G3DSA:1.10.490.80 601 698 1.8E-13 T 11-10-2018 Patl_3033 d7d3969d6d4d85914a8749fe7b0b890f 700 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 24 698 2.1E-258 T 11-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 Patl_3033 d7d3969d6d4d85914a8749fe7b0b890f 700 Gene3D G3DSA:1.10.8.540 510 598 4.2E-24 T 11-10-2018 Patl_3033 d7d3969d6d4d85914a8749fe7b0b890f 700 Pfam PF00771 FHIPEP family 31 690 4.7E-263 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Patl_3033 d7d3969d6d4d85914a8749fe7b0b890f 700 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 11-10-2018 IPR025505 FHIPEP conserved site Patl_3033 d7d3969d6d4d85914a8749fe7b0b890f 700 Gene3D G3DSA:3.40.30.60 366 509 5.0E-50 T 11-10-2018 Patl_1543 b6c5e37970e824bc353ab51b9179b1d5 68 PIRSF PIRSF002599 1 68 1.2E-23 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 Patl_1543 b6c5e37970e824bc353ab51b9179b1d5 68 SUPERFAMILY SSF50249 4 67 8.08E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_1543 b6c5e37970e824bc353ab51b9179b1d5 68 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 7.0E-29 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_1543 b6c5e37970e824bc353ab51b9179b1d5 68 PRINTS PR00050 Cold shock protein signature 26 35 2.7E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_1543 b6c5e37970e824bc353ab51b9179b1d5 68 PRINTS PR00050 Cold shock protein signature 41 59 2.7E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_1543 b6c5e37970e824bc353ab51b9179b1d5 68 PRINTS PR00050 Cold shock protein signature 6 21 2.7E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_1543 b6c5e37970e824bc353ab51b9179b1d5 68 Gene3D G3DSA:2.40.50.140 3 66 1.6E-28 T 11-10-2018 Patl_1543 b6c5e37970e824bc353ab51b9179b1d5 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 35 - T 11-10-2018 IPR019844 Cold-shock conserved site Patl_1543 b6c5e37970e824bc353ab51b9179b1d5 68 SMART SM00357 5 68 7.7E-31 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Patl_3229 397c5bc00ceed0c2db6067dd43deb80c 142 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 39 1.3E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3229 397c5bc00ceed0c2db6067dd43deb80c 142 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 19 40 2.5E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3229 397c5bc00ceed0c2db6067dd43deb80c 142 SUPERFAMILY SSF54523 20 104 3.69E-10 T 11-10-2018 Patl_3229 397c5bc00ceed0c2db6067dd43deb80c 142 Gene3D G3DSA:3.30.700.10 20 129 2.9E-7 T 11-10-2018 Patl_3417 979055dcf27635812f9334819f99cf3a 345 Pfam PF01636 Phosphotransferase enzyme family 28 248 2.3E-23 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase Patl_3417 979055dcf27635812f9334819f99cf3a 345 Gene3D G3DSA:3.90.1200.10 95 331 2.7E-70 T 11-10-2018 Patl_3417 979055dcf27635812f9334819f99cf3a 345 SUPERFAMILY SSF56112 25 305 4.83E-46 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Patl_3417 979055dcf27635812f9334819f99cf3a 345 Gene3D G3DSA:3.30.200.20 4 94 5.3E-16 T 11-10-2018 Patl_2030 421c67f2b3352b1e60141f91746456ba 312 Gene3D G3DSA:2.40.50.100 61 119 3.0E-6 T 11-10-2018 Patl_2030 421c67f2b3352b1e60141f91746456ba 312 Gene3D G3DSA:2.40.50.100 125 158 3.8E-10 T 11-10-2018 Patl_2030 421c67f2b3352b1e60141f91746456ba 312 Gene3D G3DSA:2.40.420.20 226 294 2.3E-12 T 11-10-2018 Patl_2030 421c67f2b3352b1e60141f91746456ba 312 Pfam PF13437 HlyD family secretion protein 129 217 1.6E-12 T 11-10-2018 Patl_2030 421c67f2b3352b1e60141f91746456ba 312 Gene3D G3DSA:2.40.30.170 159 224 3.8E-10 T 11-10-2018 Patl_2030 421c67f2b3352b1e60141f91746456ba 312 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 123 7.2E-9 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Patl_2030 421c67f2b3352b1e60141f91746456ba 312 SUPERFAMILY SSF51230 81 156 3.85E-11 T 11-10-2018 IPR011053 Single hybrid motif Patl_4296 3ddbba2bf5b372bde8bae337c0d44fa2 286 SUPERFAMILY SSF52943 2 286 1.18E-97 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4296 3ddbba2bf5b372bde8bae337c0d44fa2 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 2.2E-110 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4296 3ddbba2bf5b372bde8bae337c0d44fa2 286 Gene3D G3DSA:3.40.1380.10 61 205 1.3E-109 T 11-10-2018 Patl_4296 3ddbba2bf5b372bde8bae337c0d44fa2 286 Pfam PF00231 ATP synthase 5 285 3.2E-97 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4296 3ddbba2bf5b372bde8bae337c0d44fa2 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 36.694 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4296 3ddbba2bf5b372bde8bae337c0d44fa2 286 Gene3D G3DSA:1.10.287.80 6 282 1.3E-109 T 11-10-2018 Patl_4296 3ddbba2bf5b372bde8bae337c0d44fa2 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 4.2E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4296 3ddbba2bf5b372bde8bae337c0d44fa2 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 4.2E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4296 3ddbba2bf5b372bde8bae337c0d44fa2 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 4.2E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4296 3ddbba2bf5b372bde8bae337c0d44fa2 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 4.2E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4296 3ddbba2bf5b372bde8bae337c0d44fa2 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_0424 af37c023e336e71baa2ce979e3b4ea55 150 SUPERFAMILY SSF52172 18 143 3.27E-25 T 11-10-2018 IPR011006 CheY-like superfamily Patl_0424 af37c023e336e71baa2ce979e3b4ea55 150 SMART SM00448 16 134 9.6E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0424 af37c023e336e71baa2ce979e3b4ea55 150 Gene3D G3DSA:3.40.50.2300 13 148 2.8E-28 T 11-10-2018 Patl_0424 af37c023e336e71baa2ce979e3b4ea55 150 Pfam PF00072 Response regulator receiver domain 18 131 3.0E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1497 f23edb6bfaf23ed8aa2718b67f01abe2 305 Gene3D G3DSA:3.40.190.290 95 301 6.6E-35 T 11-10-2018 Patl_1497 f23edb6bfaf23ed8aa2718b67f01abe2 305 SUPERFAMILY SSF46785 2 88 7.71E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1497 f23edb6bfaf23ed8aa2718b67f01abe2 305 SUPERFAMILY SSF53850 94 303 1.45E-22 T 11-10-2018 Patl_1497 f23edb6bfaf23ed8aa2718b67f01abe2 305 Pfam PF03466 LysR substrate binding domain 95 298 6.6E-17 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_1497 f23edb6bfaf23ed8aa2718b67f01abe2 305 Gene3D G3DSA:1.10.10.10 6 91 4.2E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1497 f23edb6bfaf23ed8aa2718b67f01abe2 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.1E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3770 ef7c5c7320194560c23bc9d4235b9ce6 428 Pfam PF00144 Beta-lactamase 124 410 6.5E-21 T 11-10-2018 IPR001466 Beta-lactamase-related Patl_3770 ef7c5c7320194560c23bc9d4235b9ce6 428 Gene3D G3DSA:3.40.710.10 82 421 4.9E-55 T 11-10-2018 Patl_3770 ef7c5c7320194560c23bc9d4235b9ce6 428 SUPERFAMILY SSF56601 92 410 3.87E-58 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Patl_2131 a47574543749e306d2d42365d6619ce1 297 Gene3D G3DSA:3.90.550.10 7 296 4.2E-85 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_2131 a47574543749e306d2d42365d6619ce1 297 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 9 293 2.2E-154 T 11-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Patl_2131 a47574543749e306d2d42365d6619ce1 297 SUPERFAMILY SSF53448 9 292 2.6E-91 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_2131 a47574543749e306d2d42365d6619ce1 297 Pfam PF00483 Nucleotidyl transferase 9 245 6.8E-70 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Patl_1617 3af7cec951a339b1abb27e8600e88f52 183 Gene3D G3DSA:3.40.109.10 1 180 4.7E-36 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Patl_1617 3af7cec951a339b1abb27e8600e88f52 183 SUPERFAMILY SSF55469 1 180 5.1E-34 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Patl_1617 3af7cec951a339b1abb27e8600e88f52 183 Pfam PF00881 Nitroreductase family 8 161 1.8E-23 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Patl_1617 3af7cec951a339b1abb27e8600e88f52 183 PIRSF PIRSF000232 1 183 3.6E-60 T 11-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like Patl_1356 35a9d1204d4565c4b0960d318de5a82a 301 SUPERFAMILY SSF46785 1 111 9.09E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1356 35a9d1204d4565c4b0960d318de5a82a 301 SUPERFAMILY SSF53850 88 293 1.36E-43 T 11-10-2018 Patl_1356 35a9d1204d4565c4b0960d318de5a82a 301 Gene3D G3DSA:3.40.190.10 90 285 1.2E-66 T 11-10-2018 Patl_1356 35a9d1204d4565c4b0960d318de5a82a 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 9.8E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1356 35a9d1204d4565c4b0960d318de5a82a 301 Gene3D G3DSA:1.10.10.10 1 88 5.8E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1356 35a9d1204d4565c4b0960d318de5a82a 301 Gene3D G3DSA:3.40.190.10 162 260 1.2E-66 T 11-10-2018 Patl_1356 35a9d1204d4565c4b0960d318de5a82a 301 Pfam PF03466 LysR substrate binding domain 88 287 1.3E-40 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_1765 8e1a4eb0c5fe868a865a2239f44537a8 74 Pfam PF12088 Protein of unknown function (DUF3565) 6 62 3.5E-32 T 11-10-2018 IPR021948 Protein of unknown function DUF3565 Patl_3987 7b7a56b2ba7c22c6ce471a0d007ae549 360 ProSitePatterns PS00534 Ferrochelatase signature. 205 223 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Patl_3987 7b7a56b2ba7c22c6ce471a0d007ae549 360 Pfam PF00762 Ferrochelatase 16 335 1.4E-112 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Patl_3987 7b7a56b2ba7c22c6ce471a0d007ae549 360 Gene3D G3DSA:3.40.50.1400 18 336 2.2E-95 T 11-10-2018 Patl_3987 7b7a56b2ba7c22c6ce471a0d007ae549 360 SUPERFAMILY SSF53800 15 340 2.94E-107 T 11-10-2018 Patl_3987 7b7a56b2ba7c22c6ce471a0d007ae549 360 TIGRFAM TIGR00109 hemH: ferrochelatase 14 336 2.4E-96 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Patl_3987 7b7a56b2ba7c22c6ce471a0d007ae549 360 Gene3D G3DSA:3.40.50.1400 179 317 2.2E-95 T 11-10-2018 Patl_3987 7b7a56b2ba7c22c6ce471a0d007ae549 360 Hamap MF_00323 Ferrochelatase [hemH]. 15 336 36.981 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Patl_3501 f82e820b175b8abf4b4ecf970da88332 408 Gene3D G3DSA:3.50.50.60 5 338 3.6E-119 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3501 f82e820b175b8abf4b4ecf970da88332 408 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 390 9.1E-129 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Patl_3501 f82e820b175b8abf4b4ecf970da88332 408 SUPERFAMILY SSF51905 4 383 2.51E-61 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3501 f82e820b175b8abf4b4ecf970da88332 408 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 Patl_3501 f82e820b175b8abf4b4ecf970da88332 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 1.3E-20 T 11-10-2018 Patl_3501 f82e820b175b8abf4b4ecf970da88332 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.3E-20 T 11-10-2018 Patl_3501 f82e820b175b8abf4b4ecf970da88332 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 1.3E-20 T 11-10-2018 Patl_3501 f82e820b175b8abf4b4ecf970da88332 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 1.3E-20 T 11-10-2018 Patl_3501 f82e820b175b8abf4b4ecf970da88332 408 Pfam PF01494 FAD binding domain 4 344 1.0E-29 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 Patl_3501 f82e820b175b8abf4b4ecf970da88332 408 Gene3D G3DSA:3.30.9.50 79 269 3.6E-119 T 11-10-2018 Patl_0151 50e7c41c021cb93f649a8832cf9a97ca 495 SUPERFAMILY SSF48173 194 471 1.05E-81 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Patl_0151 50e7c41c021cb93f649a8832cf9a97ca 495 Gene3D G3DSA:3.40.50.620 2 132 4.8E-28 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_0151 50e7c41c021cb93f649a8832cf9a97ca 495 Pfam PF00875 DNA photolyase 8 132 8.3E-23 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 Patl_0151 50e7c41c021cb93f649a8832cf9a97ca 495 Pfam PF03441 FAD binding domain of DNA photolyase 267 465 6.3E-59 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 Patl_0151 50e7c41c021cb93f649a8832cf9a97ca 495 SUPERFAMILY SSF52425 6 198 1.16E-42 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 Patl_0151 50e7c41c021cb93f649a8832cf9a97ca 495 PRINTS PR00147 DNA photolyase signature 319 335 2.6E-6 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Patl_0151 50e7c41c021cb93f649a8832cf9a97ca 495 PRINTS PR00147 DNA photolyase signature 339 357 2.6E-6 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Patl_0151 50e7c41c021cb93f649a8832cf9a97ca 495 Gene3D G3DSA:1.10.579.10 287 486 1.1E-60 T 11-10-2018 Patl_0151 50e7c41c021cb93f649a8832cf9a97ca 495 Gene3D G3DSA:1.25.40.80 143 281 1.6E-18 T 11-10-2018 Patl_3760 b5146d218ff8a42657a676333a972507 491 Gene3D G3DSA:3.40.605.10 19 475 3.6E-152 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_3760 b5146d218ff8a42657a676333a972507 491 Pfam PF00171 Aldehyde dehydrogenase family 20 477 3.1E-154 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Patl_3760 b5146d218ff8a42657a676333a972507 491 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Patl_3760 b5146d218ff8a42657a676333a972507 491 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 286 297 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Patl_3760 b5146d218ff8a42657a676333a972507 491 Gene3D G3DSA:3.40.309.10 263 450 3.6E-152 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Patl_3760 b5146d218ff8a42657a676333a972507 491 SUPERFAMILY SSF53720 14 486 2.23E-146 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_1697 90c1e2efdba2e1508b7a4bac86976f2f 317 SUPERFAMILY SSF88697 250 313 1.39E-8 T 11-10-2018 IPR015947 PUA-like superfamily Patl_1697 90c1e2efdba2e1508b7a4bac86976f2f 317 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 1.2E-82 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1697 90c1e2efdba2e1508b7a4bac86976f2f 317 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 311 2.8E-15 T 11-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1697 90c1e2efdba2e1508b7a4bac86976f2f 317 SUPERFAMILY SSF55120 9 247 5.76E-79 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1697 90c1e2efdba2e1508b7a4bac86976f2f 317 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 3.8E-57 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Patl_1697 90c1e2efdba2e1508b7a4bac86976f2f 317 Gene3D G3DSA:2.30.130.10 249 315 6.4E-9 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 Patl_1697 90c1e2efdba2e1508b7a4bac86976f2f 317 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 311 18.017 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1697 90c1e2efdba2e1508b7a4bac86976f2f 317 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 248 2.7E-21 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 Patl_1697 90c1e2efdba2e1508b7a4bac86976f2f 317 Gene3D G3DSA:3.30.2350.10 2 248 1.2E-92 T 11-10-2018 Patl_2142 3d849dfb477187ff2261d4a71ac3b0ce 324 Gene3D G3DSA:1.10.10.60 221 324 3.3E-27 T 11-10-2018 Patl_2142 3d849dfb477187ff2261d4a71ac3b0ce 324 Pfam PF01965 DJ-1/PfpI family 43 181 2.1E-12 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Patl_2142 3d849dfb477187ff2261d4a71ac3b0ce 324 SUPERFAMILY SSF46689 272 322 4.48E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_2142 3d849dfb477187ff2261d4a71ac3b0ce 324 SUPERFAMILY SSF52317 2 200 4.28E-37 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_2142 3d849dfb477187ff2261d4a71ac3b0ce 324 Gene3D G3DSA:3.40.50.880 1 208 1.9E-50 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_2142 3d849dfb477187ff2261d4a71ac3b0ce 324 Pfam PF12833 Helix-turn-helix domain 242 320 2.5E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_2142 3d849dfb477187ff2261d4a71ac3b0ce 324 SUPERFAMILY SSF46689 222 270 1.79E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_2142 3d849dfb477187ff2261d4a71ac3b0ce 324 SMART SM00342 236 319 8.1E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_3427 0dd4ca338440e00fa75d6145d8cea32e 154 Pfam PF02643 Uncharacterized ACR, COG1430 50 151 5.1E-31 T 11-10-2018 IPR003795 Protein of unknown function DUF192 Patl_3427 0dd4ca338440e00fa75d6145d8cea32e 154 Gene3D G3DSA:2.60.120.1140 29 154 6.1E-37 T 11-10-2018 IPR038695 Saro_0823-like superfamily Patl_3860 731f6c618a59a40adaecd535d2c5e3fb 248 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 248 38.97 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Patl_3860 731f6c618a59a40adaecd535d2c5e3fb 248 Gene3D G3DSA:3.40.1210.10 1 248 1.7E-94 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Patl_3860 731f6c618a59a40adaecd535d2c5e3fb 248 SUPERFAMILY SSF64167 1 247 5.23E-86 T 11-10-2018 Patl_3860 731f6c618a59a40adaecd535d2c5e3fb 248 Pfam PF01975 Survival protein SurE 3 182 5.5E-62 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Patl_3860 731f6c618a59a40adaecd535d2c5e3fb 248 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 233 4.8E-71 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Patl_0321 c7955d8b4c31948bfc72dad75f18a9ad 290 Gene3D G3DSA:3.40.50.720 2 263 3.4E-73 T 11-10-2018 Patl_0321 c7955d8b4c31948bfc72dad75f18a9ad 290 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 15 197 0.0052 T 11-10-2018 Patl_0321 c7955d8b4c31948bfc72dad75f18a9ad 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 3.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0321 c7955d8b4c31948bfc72dad75f18a9ad 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 3.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0321 c7955d8b4c31948bfc72dad75f18a9ad 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 3.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0321 c7955d8b4c31948bfc72dad75f18a9ad 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 3.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0321 c7955d8b4c31948bfc72dad75f18a9ad 290 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 3.0E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0321 c7955d8b4c31948bfc72dad75f18a9ad 290 SUPERFAMILY SSF51735 14 257 3.87E-66 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0321 c7955d8b4c31948bfc72dad75f18a9ad 290 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 253 2.7E-50 T 11-10-2018 Patl_2207 61e6e52001b39bf683dfcff839dadd23 345 Pfam PF02562 PhoH-like protein 117 320 1.2E-94 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 Patl_2207 61e6e52001b39bf683dfcff839dadd23 345 SUPERFAMILY SSF52540 116 292 1.11E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2207 61e6e52001b39bf683dfcff839dadd23 345 Gene3D G3DSA:3.40.50.300 114 320 1.3E-73 T 11-10-2018 Patl_2620 f51612aa4b2feb8804af3cba86ecf7b6 72 Pfam PF09720 Putative addiction module component 14 66 5.7E-12 T 11-10-2018 IPR013406 Conserved hypothetical protein CHP02574, addiction module Patl_2550 58ea8189ce7c361ec3eaf0fcdce18ab2 378 Pfam PF13378 Enolase C-terminal domain-like 172 367 9.4E-56 T 11-10-2018 IPR029065 Enolase C-terminal domain-like Patl_2550 58ea8189ce7c361ec3eaf0fcdce18ab2 378 Gene3D G3DSA:3.30.390.10 9 138 4.7E-36 T 11-10-2018 IPR029017 Enolase-like, N-terminal Patl_2550 58ea8189ce7c361ec3eaf0fcdce18ab2 378 SUPERFAMILY SSF51604 130 376 1.57E-67 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Patl_2550 58ea8189ce7c361ec3eaf0fcdce18ab2 378 SUPERFAMILY SSF54826 16 143 2.65E-33 T 11-10-2018 Patl_2550 58ea8189ce7c361ec3eaf0fcdce18ab2 378 Gene3D G3DSA:3.20.20.120 139 365 2.7E-73 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Patl_2550 58ea8189ce7c361ec3eaf0fcdce18ab2 378 SMART SM00922 160 257 7.5E-24 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Patl_2550 58ea8189ce7c361ec3eaf0fcdce18ab2 378 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 45 140 4.7E-18 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Patl_1014 96873882fa66c40c2b2834ca3c21bbe3 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 3.5E-23 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_1014 96873882fa66c40c2b2834ca3c21bbe3 329 Gene3D G3DSA:3.30.1360.10 17 227 2.9E-83 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_1014 96873882fa66c40c2b2834ca3c21bbe3 329 SUPERFAMILY SSF56553 53 177 3.79E-42 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_1014 96873882fa66c40c2b2834ca3c21bbe3 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 34.997 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_1014 96873882fa66c40c2b2834ca3c21bbe3 329 SMART SM00662 23 233 2.2E-103 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_1014 96873882fa66c40c2b2834ca3c21bbe3 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 2.3E-112 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_1014 96873882fa66c40c2b2834ca3c21bbe3 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 327 2.0E-35 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_1014 96873882fa66c40c2b2834ca3c21bbe3 329 Gene3D G3DSA:2.170.120.12 53 176 2.9E-83 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_1014 96873882fa66c40c2b2834ca3c21bbe3 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 244 307 1.5E-23 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_1014 96873882fa66c40c2b2834ca3c21bbe3 329 SUPERFAMILY SSF55257 7 232 2.06E-30 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_1014 96873882fa66c40c2b2834ca3c21bbe3 329 Gene3D G3DSA:1.10.150.20 243 328 2.2E-38 T 11-10-2018 Patl_1014 96873882fa66c40c2b2834ca3c21bbe3 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 155 9.4E-23 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_1014 96873882fa66c40c2b2834ca3c21bbe3 329 SUPERFAMILY SSF47789 250 325 4.19E-25 T 11-10-2018 Patl_0327 b8d64a3e0fcee0c94c0a85cd3579fc84 184 Gene3D G3DSA:2.70.40.10 1 184 2.8E-50 T 11-10-2018 IPR036157 dUTPase-like superfamily Patl_0327 b8d64a3e0fcee0c94c0a85cd3579fc84 184 SUPERFAMILY SSF51283 1 183 5.63E-44 T 11-10-2018 IPR036157 dUTPase-like superfamily Patl_0327 b8d64a3e0fcee0c94c0a85cd3579fc84 184 Pfam PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) 12 166 8.0E-14 T 11-10-2018 IPR010550 Deoxycytidine triphosphate deaminase, bacterial GO:0008829|GO:0009394 Patl_0327 b8d64a3e0fcee0c94c0a85cd3579fc84 184 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 184 2.8E-45 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Patl_0327 b8d64a3e0fcee0c94c0a85cd3579fc84 184 Hamap MF_00146 dCTP deaminase [dcd]. 1 184 27.775 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Patl_2195 29c49e22fa4185ad101db878ce6eeb11 350 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 350 146.404 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 Patl_2195 29c49e22fa4185ad101db878ce6eeb11 350 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 62 346 7.1E-52 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Patl_2195 29c49e22fa4185ad101db878ce6eeb11 350 PIRSF PIRSF017020 13 350 3.4E-139 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 Patl_2195 29c49e22fa4185ad101db878ce6eeb11 350 Gene3D G3DSA:3.40.630.10 14 350 1.9E-115 T 11-10-2018 Patl_2195 29c49e22fa4185ad101db878ce6eeb11 350 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 42 344 3.1E-102 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 Patl_2195 29c49e22fa4185ad101db878ce6eeb11 350 SUPERFAMILY SSF53187 33 347 9.78E-78 T 11-10-2018 Patl_2899 5f88cb70be8158890d857b0e333c3ba4 249 Gene3D G3DSA:1.10.10.2180 126 247 4.4E-8 T 11-10-2018 Patl_2899 5f88cb70be8158890d857b0e333c3ba4 249 Pfam PF09836 Putative DNA-binding domain 7 92 6.9E-26 T 11-10-2018 IPR018640 Putative DNA-binding domain, bacteria Patl_2899 5f88cb70be8158890d857b0e333c3ba4 249 Gene3D G3DSA:1.10.150.690 32 122 4.1E-30 T 11-10-2018 Patl_3179 1913269b844a4394dab5ecc27b590be3 308 Pfam PF06574 FAD synthetase 12 166 2.4E-55 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Patl_3179 1913269b844a4394dab5ecc27b590be3 308 Gene3D G3DSA:2.40.30.30 188 307 4.5E-39 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Patl_3179 1913269b844a4394dab5ecc27b590be3 308 Gene3D G3DSA:3.40.50.620 1 186 5.1E-59 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_3179 1913269b844a4394dab5ecc27b590be3 308 SMART SM00904 183 306 5.0E-58 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Patl_3179 1913269b844a4394dab5ecc27b590be3 308 PIRSF PIRSF004491 2 308 2.0E-105 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Patl_3179 1913269b844a4394dab5ecc27b590be3 308 SUPERFAMILY SSF52374 15 175 3.94E-32 T 11-10-2018 Patl_3179 1913269b844a4394dab5ecc27b590be3 308 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 305 6.4E-101 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Patl_3179 1913269b844a4394dab5ecc27b590be3 308 Pfam PF01687 Riboflavin kinase 184 305 1.1E-35 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Patl_3179 1913269b844a4394dab5ecc27b590be3 308 SUPERFAMILY SSF82114 174 306 3.27E-45 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Patl_0486 a467eb5d93ded91c1253e4ea622d2b85 284 SUPERFAMILY SSF55021 4 84 1.45E-14 T 11-10-2018 Patl_0486 a467eb5d93ded91c1253e4ea622d2b85 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 283 45.337 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Patl_0486 a467eb5d93ded91c1253e4ea622d2b85 284 Gene3D G3DSA:3.40.50.170 88 284 1.8E-71 T 11-10-2018 Patl_0486 a467eb5d93ded91c1253e4ea622d2b85 284 Pfam PF01842 ACT domain 7 57 9.0E-8 T 11-10-2018 IPR002912 ACT domain Patl_0486 a467eb5d93ded91c1253e4ea622d2b85 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 283 3.2E-102 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Patl_0486 a467eb5d93ded91c1253e4ea622d2b85 284 Pfam PF00551 Formyl transferase 89 262 3.3E-37 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Patl_0486 a467eb5d93ded91c1253e4ea622d2b85 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 235 257 5.6E-54 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Patl_0486 a467eb5d93ded91c1253e4ea622d2b85 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 257 282 5.6E-54 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Patl_0486 a467eb5d93ded91c1253e4ea622d2b85 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 5.6E-54 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Patl_0486 a467eb5d93ded91c1253e4ea622d2b85 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 89 111 5.6E-54 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Patl_0486 a467eb5d93ded91c1253e4ea622d2b85 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 5.6E-54 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Patl_0486 a467eb5d93ded91c1253e4ea622d2b85 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 111 138 5.6E-54 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 Patl_0486 a467eb5d93ded91c1253e4ea622d2b85 284 SUPERFAMILY SSF53328 89 283 8.63E-58 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Patl_0486 a467eb5d93ded91c1253e4ea622d2b85 284 Gene3D G3DSA:3.30.70.260 1 87 9.6E-25 T 11-10-2018 Patl_0486 a467eb5d93ded91c1253e4ea622d2b85 284 PIRSF PIRSF036480 2 284 9.2E-111 T 11-10-2018 Patl_4294 72ed8d2b4145ef9c578bc6822cb39967 137 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 19.153 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4294 72ed8d2b4145ef9c578bc6822cb39967 137 Gene3D G3DSA:1.20.5.440 91 133 6.0E-10 T 11-10-2018 Patl_4294 72ed8d2b4145ef9c578bc6822cb39967 137 Gene3D G3DSA:2.60.15.10 3 90 8.5E-28 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4294 72ed8d2b4145ef9c578bc6822cb39967 137 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 132 6.1E-41 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4294 72ed8d2b4145ef9c578bc6822cb39967 137 SUPERFAMILY SSF46604 89 137 8.89E-13 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4294 72ed8d2b4145ef9c578bc6822cb39967 137 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 84 2.2E-26 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4294 72ed8d2b4145ef9c578bc6822cb39967 137 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 86 1.0E-37 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4294 72ed8d2b4145ef9c578bc6822cb39967 137 SUPERFAMILY SSF51344 3 86 7.85E-23 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4294 72ed8d2b4145ef9c578bc6822cb39967 137 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 132 7.7E-6 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Patl_4072 837a1569e8212ca88b4020d7e90da0ee 358 SUPERFAMILY SSF53756 8 295 1.22E-11 T 11-10-2018 Patl_4072 837a1569e8212ca88b4020d7e90da0ee 358 Pfam PF13528 Glycosyl transferase family 1 2 301 1.8E-36 T 11-10-2018 Patl_4072 837a1569e8212ca88b4020d7e90da0ee 358 Gene3D G3DSA:3.40.50.2000 195 309 4.3E-7 T 11-10-2018 Patl_4072 837a1569e8212ca88b4020d7e90da0ee 358 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 311 1.3E-78 T 11-10-2018 IPR005262 Conserved hypothetical protein CHP00661 Patl_0070 5b958acc535868612743af5e301156f8 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 5.3E-75 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Patl_0070 5b958acc535868612743af5e301156f8 671 SUPERFAMILY SSF52540 1 639 6.36E-162 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0070 5b958acc535868612743af5e301156f8 671 Gene3D G3DSA:1.10.10.160 108 181 4.7E-93 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily Patl_0070 5b958acc535868612743af5e301156f8 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 668 0.0 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 Patl_0070 5b958acc535868612743af5e301156f8 671 Gene3D G3DSA:1.10.486.10 377 545 1.2E-126 T 11-10-2018 Patl_0070 5b958acc535868612743af5e301156f8 671 Gene3D G3DSA:3.40.50.300 4 266 4.7E-93 T 11-10-2018 Patl_0070 5b958acc535868612743af5e301156f8 671 Gene3D G3DSA:3.40.50.300 274 633 1.2E-126 T 11-10-2018 Patl_0070 5b958acc535868612743af5e301156f8 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 669 39.647 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 Patl_0070 5b958acc535868612743af5e301156f8 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 614 2.3E-68 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Patl_0128 caca92336d4e2e89da77f97623faec2f 871 SUPERFAMILY SSF49303 217 325 8.63E-19 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Patl_0128 caca92336d4e2e89da77f97623faec2f 871 SUPERFAMILY SSF51445 322 670 1.16E-110 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_0128 caca92336d4e2e89da77f97623faec2f 871 Gene3D G3DSA:2.60.120.260 22 214 1.4E-58 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0128 caca92336d4e2e89da77f97623faec2f 871 SUPERFAMILY SSF49785 25 213 5.39E-52 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0128 caca92336d4e2e89da77f97623faec2f 871 Pfam PF00703 Glycosyl hydrolases family 2 218 325 1.9E-9 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0128 caca92336d4e2e89da77f97623faec2f 871 Gene3D G3DSA:3.20.20.80 324 670 8.2E-131 T 11-10-2018 Patl_0128 caca92336d4e2e89da77f97623faec2f 871 Gene3D G3DSA:2.60.40.10 674 769 1.2E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0128 caca92336d4e2e89da77f97623faec2f 871 Gene3D G3DSA:2.60.40.10 216 323 2.4E-18 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0128 caca92336d4e2e89da77f97623faec2f 871 Gene3D G3DSA:2.60.40.10 770 860 1.2E-14 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0128 caca92336d4e2e89da77f97623faec2f 871 SUPERFAMILY SSF49303 775 839 8.34E-11 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Patl_0128 caca92336d4e2e89da77f97623faec2f 871 SUPERFAMILY SSF49303 675 773 2.3E-23 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Patl_1536 8cbd55965c7c7ca7b8afe862b8153b88 274 Gene3D G3DSA:3.40.190.10 33 244 3.0E-33 T 11-10-2018 Patl_1536 8cbd55965c7c7ca7b8afe862b8153b88 274 Gene3D G3DSA:3.40.190.10 112 212 3.0E-33 T 11-10-2018 Patl_1536 8cbd55965c7c7ca7b8afe862b8153b88 274 SUPERFAMILY SSF53850 29 247 5.8E-20 T 11-10-2018 Patl_1536 8cbd55965c7c7ca7b8afe862b8153b88 274 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 33 263 4.3E-47 T 11-10-2018 Patl_1084 257a57e3bd9048c87593f21c83a4b4f9 635 Pfam PF01757 Acyltransferase family 5 323 8.2E-31 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Patl_2505 1464e0158706cf2aec4f1434163069bc 541 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 83 538 2.8E-137 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Patl_2505 1464e0158706cf2aec4f1434163069bc 541 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 43 538 1.5E-172 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Patl_2682 e48469a185e053997b59afaca99a9886 406 PIRSF PIRSF005096 45 405 2.0E-155 T 11-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 Patl_2682 e48469a185e053997b59afaca99a9886 406 SUPERFAMILY SSF74650 51 402 3.33E-106 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Patl_2682 e48469a185e053997b59afaca99a9886 406 Gene3D G3DSA:2.70.98.10 44 404 3.0E-117 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Patl_2682 e48469a185e053997b59afaca99a9886 406 Pfam PF01263 Aldose 1-epimerase 65 401 1.2E-83 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 Patl_3075 0f9a325dbac86ef24d9ec612bdaa7875 373 SUPERFAMILY SSF53756 166 357 5.1E-6 T 11-10-2018 Patl_3075 0f9a325dbac86ef24d9ec612bdaa7875 373 Gene3D G3DSA:3.40.50.2000 165 304 7.1E-30 T 11-10-2018 Patl_3075 0f9a325dbac86ef24d9ec612bdaa7875 373 Gene3D G3DSA:3.40.50.11190 10 164 4.2E-22 T 11-10-2018 Patl_3075 0f9a325dbac86ef24d9ec612bdaa7875 373 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 10 289 1.4E-91 T 11-10-2018 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase Patl_3813 6f72aa5adbeea896afe2c2baedb91ae7 198 Gene3D G3DSA:1.10.10.10 84 160 8.6E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3813 6f72aa5adbeea896afe2c2baedb91ae7 198 PIRSF PIRSF036158 1 198 1.8E-63 T 11-10-2018 IPR014601 Transcriptional regulator with MarR-type HTH domain Patl_3813 6f72aa5adbeea896afe2c2baedb91ae7 198 Pfam PF13463 Winged helix DNA-binding domain 83 145 6.5E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_3813 6f72aa5adbeea896afe2c2baedb91ae7 198 SUPERFAMILY SSF46785 51 188 1.8E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2310 ce3498e07ca9ae8513a246e112c5925e 718 Pfam PF13424 Tetratricopeptide repeat 163 234 3.6E-12 T 11-10-2018 Patl_2310 ce3498e07ca9ae8513a246e112c5925e 718 Gene3D G3DSA:3.30.70.270 488 682 9.8E-49 T 11-10-2018 Patl_2310 ce3498e07ca9ae8513a246e112c5925e 718 SMART SM00267 491 682 1.5E-43 T 11-10-2018 IPR000160 GGDEF domain Patl_2310 ce3498e07ca9ae8513a246e112c5925e 718 SUPERFAMILY SSF48452 159 370 2.28E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2310 ce3498e07ca9ae8513a246e112c5925e 718 SUPERFAMILY SSF48452 49 159 5.16E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2310 ce3498e07ca9ae8513a246e112c5925e 718 SMART SM00028 204 237 0.079 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2310 ce3498e07ca9ae8513a246e112c5925e 718 SMART SM00028 164 197 0.15 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2310 ce3498e07ca9ae8513a246e112c5925e 718 SMART SM00028 244 277 22.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2310 ce3498e07ca9ae8513a246e112c5925e 718 SMART SM00028 124 157 0.004 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2310 ce3498e07ca9ae8513a246e112c5925e 718 SMART SM00028 324 357 260.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2310 ce3498e07ca9ae8513a246e112c5925e 718 Pfam PF00990 Diguanylate cyclase, GGDEF domain 503 677 1.8E-37 T 11-10-2018 IPR000160 GGDEF domain Patl_2310 ce3498e07ca9ae8513a246e112c5925e 718 Gene3D G3DSA:1.25.40.10 52 164 1.2E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2310 ce3498e07ca9ae8513a246e112c5925e 718 SUPERFAMILY SSF55073 507 680 4.39E-37 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_2310 ce3498e07ca9ae8513a246e112c5925e 718 Gene3D G3DSA:1.25.40.10 165 404 6.2E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2310 ce3498e07ca9ae8513a246e112c5925e 718 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 499 679 5.7E-39 T 11-10-2018 IPR000160 GGDEF domain Patl_2834 1340e3ebcf5526a26860613eb27e95cb 280 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 60 73 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Patl_2834 1340e3ebcf5526a26860613eb27e95cb 280 Gene3D G3DSA:3.20.20.70 13 280 1.1E-92 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2834 1340e3ebcf5526a26860613eb27e95cb 280 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 26 277 36.901 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Patl_2834 1340e3ebcf5526a26860613eb27e95cb 280 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 20 275 2.4E-96 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Patl_2834 1340e3ebcf5526a26860613eb27e95cb 280 Pfam PF00290 Tryptophan synthase alpha chain 20 278 1.3E-89 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Patl_2834 1340e3ebcf5526a26860613eb27e95cb 280 SUPERFAMILY SSF51366 14 278 5.09E-86 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Patl_0233 32a959d0e495585ad6cf8fb49e7e19d2 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 6.7E-37 T 11-10-2018 IPR003004 GspF/PilC family Patl_0233 32a959d0e495585ad6cf8fb49e7e19d2 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 6.7E-37 T 11-10-2018 IPR003004 GspF/PilC family Patl_0233 32a959d0e495585ad6cf8fb49e7e19d2 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 6.7E-37 T 11-10-2018 IPR003004 GspF/PilC family Patl_0233 32a959d0e495585ad6cf8fb49e7e19d2 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 6.7E-37 T 11-10-2018 IPR003004 GspF/PilC family Patl_0233 32a959d0e495585ad6cf8fb49e7e19d2 406 Gene3D G3DSA:1.20.81.30 56 173 4.2E-34 T 11-10-2018 Patl_0233 32a959d0e495585ad6cf8fb49e7e19d2 406 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 404 5.3E-158 T 11-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 Patl_0233 32a959d0e495585ad6cf8fb49e7e19d2 406 Gene3D G3DSA:1.20.81.30 258 366 4.8E-24 T 11-10-2018 Patl_0233 32a959d0e495585ad6cf8fb49e7e19d2 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 1.3E-30 T 11-10-2018 IPR018076 Type II secretion system F domain Patl_0233 32a959d0e495585ad6cf8fb49e7e19d2 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 395 2.6E-25 T 11-10-2018 IPR018076 Type II secretion system F domain Patl_0233 32a959d0e495585ad6cf8fb49e7e19d2 406 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 Patl_3702 63edc43691a6e4e8b52e2715066fb8d6 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.0E-45 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Patl_3702 63edc43691a6e4e8b52e2715066fb8d6 130 SUPERFAMILY SSF54211 5 130 1.48E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_3702 63edc43691a6e4e8b52e2715066fb8d6 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.351 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Patl_3702 63edc43691a6e4e8b52e2715066fb8d6 130 Gene3D G3DSA:3.30.230.10 1 130 1.7E-53 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Patl_3702 63edc43691a6e4e8b52e2715066fb8d6 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 272 282 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 640 655 3.3E-56 T 11-10-2018 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 537 544 3.3E-56 T 11-10-2018 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 239 261 3.3E-56 T 11-10-2018 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 433 3.3E-56 T 11-10-2018 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 575 596 3.3E-56 T 11-10-2018 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 662 682 3.3E-56 T 11-10-2018 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 286 3.3E-56 T 11-10-2018 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 372 381 3.3E-56 T 11-10-2018 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 496 510 3.3E-56 T 11-10-2018 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 Pfam PF09335 SNARE associated Golgi protein 68 184 7.5E-23 T 11-10-2018 IPR032816 SNARE associated Golgi protein Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 Gene3D G3DSA:3.50.50.60 240 561 4.3E-99 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 SUPERFAMILY SSF55424 575 691 4.3E-35 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 239 557 1.8E-57 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 Gene3D G3DSA:3.30.390.30 578 700 1.0E-37 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 240 259 3.9E-26 T 11-10-2018 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 495 511 3.9E-26 T 11-10-2018 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 522 544 3.9E-26 T 11-10-2018 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 369 387 3.9E-26 T 11-10-2018 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 408 426 3.9E-26 T 11-10-2018 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 SUPERFAMILY SSF51905 239 602 1.75E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 579 685 7.0E-29 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Patl_0395 489e410fdc204c67ddf122e4ec910f02 713 Gene3D G3DSA:3.50.50.60 381 502 4.3E-99 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2090 9cce393e3dcd2109512113413b85d0e1 143 Pfam PF13411 MerR HTH family regulatory protein 3 68 5.2E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2090 9cce393e3dcd2109512113413b85d0e1 143 SUPERFAMILY SSF46955 1 113 5.49E-24 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Patl_2090 9cce393e3dcd2109512113413b85d0e1 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.7E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2090 9cce393e3dcd2109512113413b85d0e1 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.7E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2090 9cce393e3dcd2109512113413b85d0e1 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.7E-8 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2090 9cce393e3dcd2109512113413b85d0e1 143 Gene3D G3DSA:1.10.1660.10 1 125 4.9E-24 T 11-10-2018 Patl_2090 9cce393e3dcd2109512113413b85d0e1 143 SMART SM00422 1 70 1.4E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_3343 92c7e938655465d5c9fa4723edea50ac 401 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 162 190 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 Patl_3343 92c7e938655465d5c9fa4723edea50ac 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 162 190 1.0E-17 T 11-10-2018 IPR003004 GspF/PilC family Patl_3343 92c7e938655465d5c9fa4723edea50ac 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 382 401 1.0E-17 T 11-10-2018 IPR003004 GspF/PilC family Patl_3343 92c7e938655465d5c9fa4723edea50ac 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 63 75 1.0E-17 T 11-10-2018 IPR003004 GspF/PilC family Patl_3343 92c7e938655465d5c9fa4723edea50ac 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 366 380 1.0E-17 T 11-10-2018 IPR003004 GspF/PilC family Patl_3343 92c7e938655465d5c9fa4723edea50ac 401 Gene3D G3DSA:1.20.81.30 53 169 5.4E-27 T 11-10-2018 Patl_3343 92c7e938655465d5c9fa4723edea50ac 401 Pfam PF00482 Type II secretion system (T2SS), protein F 68 190 2.4E-29 T 11-10-2018 IPR018076 Type II secretion system F domain Patl_3343 92c7e938655465d5c9fa4723edea50ac 401 Pfam PF00482 Type II secretion system (T2SS), protein F 271 393 5.8E-28 T 11-10-2018 IPR018076 Type II secretion system F domain Patl_3343 92c7e938655465d5c9fa4723edea50ac 401 Gene3D G3DSA:1.20.81.30 254 363 3.3E-27 T 11-10-2018 Patl_3528 576958ac7de227467ee4b2b60b9b5ac9 152 Gene3D G3DSA:2.40.330.20 1 149 5.8E-42 T 11-10-2018 IPR038619 MraZ superfamily Patl_3528 576958ac7de227467ee4b2b60b9b5ac9 152 SUPERFAMILY SSF89447 1 137 2.83E-44 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily Patl_3528 576958ac7de227467ee4b2b60b9b5ac9 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 147 8.0E-83 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Patl_3528 576958ac7de227467ee4b2b60b9b5ac9 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 6.8E-55 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Patl_3528 576958ac7de227467ee4b2b60b9b5ac9 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 55.631 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Patl_3528 576958ac7de227467ee4b2b60b9b5ac9 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 2.1E-21 T 11-10-2018 IPR020603 MraZ domain Patl_3528 576958ac7de227467ee4b2b60b9b5ac9 152 Pfam PF02381 MraZ protein, putative antitoxin-like 78 138 2.4E-16 T 11-10-2018 IPR020603 MraZ domain Patl_3982 7adb5ccd2901ffac308c793e63d93884 143 Pfam PF12975 Domain of unknown function (DUF3859) 6 126 5.1E-49 T 11-10-2018 IPR024331 Domain of unknown function DUF3859 Patl_3982 7adb5ccd2901ffac308c793e63d93884 143 Gene3D G3DSA:2.60.40.2390 25 127 1.6E-7 T 11-10-2018 Patl_2798 55755849e9abe6a323c5ce7a4537523b 164 PIRSF PIRSF006173 1 160 1.6E-50 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 Patl_2798 55755849e9abe6a323c5ce7a4537523b 164 Pfam PF03692 Putative zinc- or iron-chelating domain 23 103 1.6E-7 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Patl_4283 178f81d29762cd3385402bbd37ff5d0e 290 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 4 290 3.3E-114 T 11-10-2018 IPR005229 Conserved hypothetical protein CHP00255 Patl_4283 178f81d29762cd3385402bbd37ff5d0e 290 Pfam PF03755 YicC-like family, N-terminal region 5 156 1.5E-40 T 11-10-2018 IPR013527 YicC-like, N-terminal Patl_4283 178f81d29762cd3385402bbd37ff5d0e 290 Pfam PF08340 Domain of unknown function (DUF1732) 206 290 1.2E-34 T 11-10-2018 IPR013551 Domain of unknown function DUF1732 Patl_3890 a0a236f0724b3306732a47937d9f8129 228 Pfam PF03737 Aldolase/RraA 27 172 1.3E-39 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Patl_3890 a0a236f0724b3306732a47937d9f8129 228 Gene3D G3DSA:3.50.30.40 23 173 4.0E-52 T 11-10-2018 Patl_3890 a0a236f0724b3306732a47937d9f8129 228 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 3 223 2.6E-96 T 11-10-2018 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 Patl_3890 a0a236f0724b3306732a47937d9f8129 228 SUPERFAMILY SSF89562 21 182 8.5E-47 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Patl_0404 f72273e5de2f960c39d8cac432ebb00e 387 SUPERFAMILY SSF111369 60 272 3.66E-18 T 11-10-2018 Patl_0404 f72273e5de2f960c39d8cac432ebb00e 387 Gene3D G3DSA:2.40.420.20 306 370 1.1E-47 T 11-10-2018 Patl_0404 f72273e5de2f960c39d8cac432ebb00e 387 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 372 7.0E-38 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Patl_0404 f72273e5de2f960c39d8cac432ebb00e 387 Pfam PF13437 HlyD family secretion protein 183 284 2.7E-6 T 11-10-2018 Patl_0404 f72273e5de2f960c39d8cac432ebb00e 387 Gene3D G3DSA:1.10.287.470 105 179 1.1E-47 T 11-10-2018 Patl_0404 f72273e5de2f960c39d8cac432ebb00e 387 Gene3D G3DSA:2.40.30.170 61 305 1.1E-47 T 11-10-2018 Patl_0404 f72273e5de2f960c39d8cac432ebb00e 387 Gene3D G3DSA:2.40.50.100 68 213 1.1E-47 T 11-10-2018 Patl_0445 328d7a9f9be48ff867414b1f0a1232b1 176 SUPERFAMILY SSF55729 5 154 1.15E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_0445 328d7a9f9be48ff867414b1f0a1232b1 176 Gene3D G3DSA:3.40.630.30 1 164 6.0E-34 T 11-10-2018 Patl_0445 328d7a9f9be48ff867414b1f0a1232b1 176 Pfam PF13302 Acetyltransferase (GNAT) domain 12 151 1.4E-22 T 11-10-2018 IPR000182 GNAT domain Patl_3724 fe8d67e65172c55c3e9743cc9aaac179 390 Pfam PF13377 Periplasmic binding protein-like domain 112 277 1.7E-36 T 11-10-2018 Patl_3724 fe8d67e65172c55c3e9743cc9aaac179 390 Gene3D G3DSA:3.40.50.2300 102 278 3.7E-84 T 11-10-2018 Patl_3724 fe8d67e65172c55c3e9743cc9aaac179 390 SUPERFAMILY SSF46689 338 387 2.87E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_3724 fe8d67e65172c55c3e9743cc9aaac179 390 SUPERFAMILY SSF53822 11 301 7.85E-43 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Patl_3724 fe8d67e65172c55c3e9743cc9aaac179 390 Gene3D G3DSA:1.10.10.60 281 388 2.5E-26 T 11-10-2018 Patl_3724 fe8d67e65172c55c3e9743cc9aaac179 390 SMART SM00342 301 384 1.1E-24 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_3724 fe8d67e65172c55c3e9743cc9aaac179 390 Gene3D G3DSA:3.40.50.2300 8 269 3.7E-84 T 11-10-2018 Patl_3724 fe8d67e65172c55c3e9743cc9aaac179 390 Pfam PF12833 Helix-turn-helix domain 310 385 1.0E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_2520 14e75180b1dfe2c5418e75ae953d0573 122 Pfam PF12487 Protein of unknown function (DUF3703) 8 114 1.1E-36 T 11-10-2018 IPR022172 Protein of unknown function DUF3703 Patl_0926 a9819b668ddad9e91b01957c27f1893c 269 SUPERFAMILY SSF52540 2 267 1.46E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0926 a9819b668ddad9e91b01957c27f1893c 269 Gene3D G3DSA:3.40.50.300 1 258 7.6E-70 T 11-10-2018 Patl_0926 a9819b668ddad9e91b01957c27f1893c 269 PIRSF PIRSF003092 1 269 4.4E-94 T 11-10-2018 IPR025501 ATP binding protein MinD Patl_0926 a9819b668ddad9e91b01957c27f1893c 269 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 225 2.5E-21 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Patl_0926 a9819b668ddad9e91b01957c27f1893c 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 265 1.5E-111 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 Patl_1895 b63b7f7f1b54331d6b1d5daa9a029912 257 Pfam PF00753 Metallo-beta-lactamase superfamily 20 159 3.9E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_1895 b63b7f7f1b54331d6b1d5daa9a029912 257 Gene3D G3DSA:3.60.15.10 1 257 1.5E-86 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_1895 b63b7f7f1b54331d6b1d5daa9a029912 257 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 6 257 1.3E-101 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Patl_1895 b63b7f7f1b54331d6b1d5daa9a029912 257 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 4 257 41.878 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Patl_1895 b63b7f7f1b54331d6b1d5daa9a029912 257 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 170 257 9.5E-25 T 11-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Patl_1895 b63b7f7f1b54331d6b1d5daa9a029912 257 SMART SM00849 14 169 1.2E-28 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_1895 b63b7f7f1b54331d6b1d5daa9a029912 257 SUPERFAMILY SSF56281 4 257 1.11E-63 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_1895 b63b7f7f1b54331d6b1d5daa9a029912 257 PIRSF PIRSF005457 1 257 2.2E-93 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 Patl_2553 fe3af2e3bb6deb60c89d61e8b9166257 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Patl_2553 fe3af2e3bb6deb60c89d61e8b9166257 487 Pfam PF00171 Aldehyde dehydrogenase family 21 482 4.5E-158 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Patl_2553 fe3af2e3bb6deb60c89d61e8b9166257 487 Gene3D G3DSA:3.40.605.10 27 480 3.3E-182 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_2553 fe3af2e3bb6deb60c89d61e8b9166257 487 Gene3D G3DSA:3.40.309.10 258 451 3.3E-182 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Patl_2553 fe3af2e3bb6deb60c89d61e8b9166257 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Patl_2553 fe3af2e3bb6deb60c89d61e8b9166257 487 SUPERFAMILY SSF53720 9 485 1.2E-155 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_1033 03d5b6df812cf2e29a25050aff3cf1bc 1503 Gene3D G3DSA:1.10.1330.10 1442 1502 1.5E-6 T 11-10-2018 Patl_1033 03d5b6df812cf2e29a25050aff3cf1bc 1503 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1477 1489 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Patl_1033 03d5b6df812cf2e29a25050aff3cf1bc 1503 Gene3D G3DSA:3.60.10.10 1117 1435 4.5E-29 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Patl_1033 03d5b6df812cf2e29a25050aff3cf1bc 1503 SUPERFAMILY SSF56219 1115 1435 1.02E-31 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Patl_1033 03d5b6df812cf2e29a25050aff3cf1bc 1503 Pfam PF04231 Endonuclease I 249 461 1.2E-41 T 11-10-2018 IPR007346 Endonuclease I GO:0004518 Patl_1033 03d5b6df812cf2e29a25050aff3cf1bc 1503 SUPERFAMILY SSF63446 1442 1498 4.84E-7 T 11-10-2018 IPR036439 Dockerin domain superfamily GO:0000272 Patl_1033 03d5b6df812cf2e29a25050aff3cf1bc 1503 SUPERFAMILY SSF54060 256 461 4.94E-49 T 11-10-2018 Patl_1570 eadabe728005487f02fea76d41436fb6 209 SUPERFAMILY SSF53335 31 208 2.84E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_1570 eadabe728005487f02fea76d41436fb6 209 Gene3D G3DSA:3.40.50.150 30 208 1.7E-59 T 11-10-2018 Patl_1570 eadabe728005487f02fea76d41436fb6 209 PIRSF PIRSF005461 2 209 1.9E-79 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Patl_1570 eadabe728005487f02fea76d41436fb6 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.071 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 Patl_1570 eadabe728005487f02fea76d41436fb6 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 1.2E-55 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Patl_0815 9715b4dc3213cb59c53c80bd42c3201e 1074 SUPERFAMILY SSF46626 45 140 6.47E-7 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_0815 9715b4dc3213cb59c53c80bd42c3201e 1074 Pfam PF07635 Planctomycete cytochrome C 55 117 2.6E-19 T 11-10-2018 IPR011429 Cytochrome C, Planctomycete-type Patl_0815 9715b4dc3213cb59c53c80bd42c3201e 1074 Pfam PF07583 Protein of unknown function (DUF1549) 166 372 4.3E-89 T 11-10-2018 IPR011444 Domain of unknown function DUF1549 Patl_0815 9715b4dc3213cb59c53c80bd42c3201e 1074 Gene3D G3DSA:2.60.120.200 479 672 4.4E-13 T 11-10-2018 Patl_0815 9715b4dc3213cb59c53c80bd42c3201e 1074 SUPERFAMILY SSF49899 432 671 1.98E-18 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Patl_0815 9715b4dc3213cb59c53c80bd42c3201e 1074 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 499 668 3.0E-10 T 11-10-2018 Patl_0815 9715b4dc3213cb59c53c80bd42c3201e 1074 Pfam PF07587 Protein of unknown function (DUF1553) 766 1019 6.5E-96 T 11-10-2018 IPR022655 Domain of unknown function DUF1553 Patl_0379 e011623ff5bf6812891ebad579da34d8 641 Pfam PF02910 Fumarate reductase flavoprotein C-term 540 594 5.8E-12 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_0379 e011623ff5bf6812891ebad579da34d8 641 PIRSF PIRSF000171 174 295 8.9E-7 T 11-10-2018 Patl_0379 e011623ff5bf6812891ebad579da34d8 641 PIRSF PIRSF000171 387 612 1.6E-30 T 11-10-2018 Patl_0379 e011623ff5bf6812891ebad579da34d8 641 PIRSF PIRSF000171 60 109 6.2E-8 T 11-10-2018 Patl_0379 e011623ff5bf6812891ebad579da34d8 641 Gene3D G3DSA:3.50.50.90 370 605 1.1E-35 T 11-10-2018 Patl_0379 e011623ff5bf6812891ebad579da34d8 641 SUPERFAMILY SSF46977 487 616 3.01E-27 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_0379 e011623ff5bf6812891ebad579da34d8 641 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 72 91 5.0E-7 T 11-10-2018 Patl_0379 e011623ff5bf6812891ebad579da34d8 641 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 402 424 5.0E-7 T 11-10-2018 Patl_0379 e011623ff5bf6812891ebad579da34d8 641 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 227 245 5.0E-7 T 11-10-2018 Patl_0379 e011623ff5bf6812891ebad579da34d8 641 SUPERFAMILY SSF51905 60 481 1.3E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0379 e011623ff5bf6812891ebad579da34d8 641 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 71 93 3.5E-8 T 11-10-2018 Patl_0379 e011623ff5bf6812891ebad579da34d8 641 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 230 239 3.5E-8 T 11-10-2018 Patl_0379 e011623ff5bf6812891ebad579da34d8 641 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 417 424 3.5E-8 T 11-10-2018 Patl_0379 e011623ff5bf6812891ebad579da34d8 641 Pfam PF00890 FAD binding domain 71 168 4.9E-11 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_0379 e011623ff5bf6812891ebad579da34d8 641 Gene3D G3DSA:3.50.50.60 61 297 6.4E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2489 f520589a7040305bbb502468865c3978 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 69 165 2.1E-15 T 11-10-2018 IPR016188 PurM-like, N-terminal domain Patl_2489 f520589a7040305bbb502468865c3978 345 Gene3D G3DSA:3.30.1330.10 7 171 4.5E-65 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Patl_2489 f520589a7040305bbb502468865c3978 345 Gene3D G3DSA:3.90.650.10 172 345 7.2E-70 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Patl_2489 f520589a7040305bbb502468865c3978 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 344 46.093 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Patl_2489 f520589a7040305bbb502468865c3978 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 338 1.9E-40 T 11-10-2018 IPR010918 PurM-like, C-terminal domain Patl_2489 f520589a7040305bbb502468865c3978 345 SUPERFAMILY SSF56042 172 339 9.57E-63 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Patl_2489 f520589a7040305bbb502468865c3978 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 9.8E-148 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Patl_2489 f520589a7040305bbb502468865c3978 345 SUPERFAMILY SSF55326 8 169 5.83E-51 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Patl_2888 1eee207b2e1de5c773684de4a9c4ed7c 206 Gene3D G3DSA:1.10.287.1080 114 206 2.2E-29 T 11-10-2018 Patl_2888 1eee207b2e1de5c773684de4a9c4ed7c 206 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 114 200 19.256 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Patl_2888 1eee207b2e1de5c773684de4a9c4ed7c 206 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 118 200 6.9E-30 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Patl_2888 1eee207b2e1de5c773684de4a9c4ed7c 206 SUPERFAMILY SSF101386 116 204 2.62E-24 T 11-10-2018 Patl_2888 1eee207b2e1de5c773684de4a9c4ed7c 206 Gene3D G3DSA:3.10.20.400 1 98 2.6E-33 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Patl_2888 1eee207b2e1de5c773684de4a9c4ed7c 206 SUPERFAMILY SSF141734 8 122 6.28E-43 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Patl_2888 1eee207b2e1de5c773684de4a9c4ed7c 206 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 118 204 1.2E-15 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 Patl_2888 1eee207b2e1de5c773684de4a9c4ed7c 206 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 9 205 35.57 T 11-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 Patl_2888 1eee207b2e1de5c773684de4a9c4ed7c 206 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 34 106 1.8E-29 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Patl_2888 1eee207b2e1de5c773684de4a9c4ed7c 206 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 57 106 4.0E-24 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Patl_2337 0c80ab40ffda7853e3a2f98957c2e1f4 258 Gene3D G3DSA:3.40.190.10 99 195 2.6E-23 T 11-10-2018 Patl_2337 0c80ab40ffda7853e3a2f98957c2e1f4 258 SMART SM00062 13 239 2.5E-5 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_2337 0c80ab40ffda7853e3a2f98957c2e1f4 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 18 235 9.7E-21 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_2337 0c80ab40ffda7853e3a2f98957c2e1f4 258 Gene3D G3DSA:3.40.190.10 20 221 2.6E-23 T 11-10-2018 Patl_2337 0c80ab40ffda7853e3a2f98957c2e1f4 258 SUPERFAMILY SSF53850 14 236 1.63E-35 T 11-10-2018 Patl_3262 7ef7aba7456c795d283ef9c1ae121442 170 Pfam PF02464 Competence-damaged protein 7 155 1.5E-56 T 11-10-2018 IPR008136 CinA, C-terminal Patl_3262 7ef7aba7456c795d283ef9c1ae121442 170 SUPERFAMILY SSF142433 4 156 2.62E-53 T 11-10-2018 IPR036653 CinA-like, C-terminal Patl_3262 7ef7aba7456c795d283ef9c1ae121442 170 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 12 155 7.8E-50 T 11-10-2018 IPR008136 CinA, C-terminal Patl_3262 7ef7aba7456c795d283ef9c1ae121442 170 Gene3D G3DSA:3.90.950.20 1 158 2.4E-58 T 11-10-2018 IPR036653 CinA-like, C-terminal Patl_3965 0db9db1829526dc649e6204782a0f852 302 SUPERFAMILY SSF56317 9 298 8.89E-81 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Patl_3965 0db9db1829526dc649e6204782a0f852 302 Gene3D G3DSA:3.60.110.10 2 301 1.2E-92 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Patl_3965 0db9db1829526dc649e6204782a0f852 302 Pfam PF00795 Carbon-nitrogen hydrolase 12 280 8.4E-57 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Patl_0735 422b29a55077e651637b09a740c8f53e 396 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 143 1.9E-29 T 11-10-2018 IPR000014 PAS domain Patl_0735 422b29a55077e651637b09a740c8f53e 396 SMART SM00387 264 377 5.2E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0735 422b29a55077e651637b09a740c8f53e 396 Pfam PF08447 PAS fold 49 132 1.2E-12 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 Patl_0735 422b29a55077e651637b09a740c8f53e 396 SUPERFAMILY SSF55874 213 375 1.02E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0735 422b29a55077e651637b09a740c8f53e 396 Gene3D G3DSA:1.10.287.130 146 219 9.2E-8 T 11-10-2018 Patl_0735 422b29a55077e651637b09a740c8f53e 396 SMART SM00091 25 91 2.7E-11 T 11-10-2018 IPR000014 PAS domain Patl_0735 422b29a55077e651637b09a740c8f53e 396 SMART SM00086 98 140 3.0E-8 T 11-10-2018 IPR001610 PAC motif Patl_0735 422b29a55077e651637b09a740c8f53e 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 318 2.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0735 422b29a55077e651637b09a740c8f53e 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 354 2.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0735 422b29a55077e651637b09a740c8f53e 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 335 2.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0735 422b29a55077e651637b09a740c8f53e 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 374 2.5E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0735 422b29a55077e651637b09a740c8f53e 396 SUPERFAMILY SSF55785 31 143 2.09E-24 T 11-10-2018 IPR035965 PAS domain superfamily Patl_0735 422b29a55077e651637b09a740c8f53e 396 Gene3D G3DSA:3.30.450.20 23 139 3.2E-23 T 11-10-2018 Patl_0735 422b29a55077e651637b09a740c8f53e 396 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 268 376 6.2E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0735 422b29a55077e651637b09a740c8f53e 396 SUPERFAMILY SSF47384 146 219 3.53E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_0735 422b29a55077e651637b09a740c8f53e 396 Gene3D G3DSA:3.30.565.10 224 378 3.0E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0796 5541d81929d05a87c7e6909826250502 252 SUPERFAMILY SSF55781 78 244 2.55E-25 T 11-10-2018 Patl_0796 5541d81929d05a87c7e6909826250502 252 Gene3D G3DSA:1.10.10.10 10 82 6.4E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0796 5541d81929d05a87c7e6909826250502 252 SMART SM00346 11 101 1.7E-13 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Patl_0796 5541d81929d05a87c7e6909826250502 252 Pfam PF09339 IclR helix-turn-helix domain 13 62 4.9E-10 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Patl_0796 5541d81929d05a87c7e6909826250502 252 SUPERFAMILY SSF46785 13 80 5.79E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0796 5541d81929d05a87c7e6909826250502 252 Gene3D G3DSA:3.30.450.40 85 248 2.2E-24 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_3011 08b913643756c57cfcd12e95b3df9ce1 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 1.2E-168 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Patl_3011 08b913643756c57cfcd12e95b3df9ce1 376 PIRSF PIRSF015658 1 376 1.1E-175 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Patl_3011 08b913643756c57cfcd12e95b3df9ce1 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 4.7E-157 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 Patl_1311 892a1d4b8b8844c1aa4f44a73f71b99f 372 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 94 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Patl_1311 892a1d4b8b8844c1aa4f44a73f71b99f 372 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 152 370 3.7E-58 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 Patl_1311 892a1d4b8b8844c1aa4f44a73f71b99f 372 Gene3D G3DSA:3.40.140.10 2 146 1.9E-46 T 11-10-2018 Patl_1311 892a1d4b8b8844c1aa4f44a73f71b99f 372 SUPERFAMILY SSF53927 8 150 9.21E-47 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Patl_1311 892a1d4b8b8844c1aa4f44a73f71b99f 372 SUPERFAMILY SSF53597 150 368 3.53E-58 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Patl_1311 892a1d4b8b8844c1aa4f44a73f71b99f 372 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 105 1.3E-21 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Patl_1311 892a1d4b8b8844c1aa4f44a73f71b99f 372 Pfam PF01872 RibD C-terminal domain 153 366 9.1E-51 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Patl_1311 892a1d4b8b8844c1aa4f44a73f71b99f 372 Gene3D G3DSA:3.40.430.10 147 371 6.2E-72 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Patl_1311 892a1d4b8b8844c1aa4f44a73f71b99f 372 PIRSF PIRSF006769 3 372 2.8E-132 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Patl_1311 892a1d4b8b8844c1aa4f44a73f71b99f 372 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 368 1.3E-126 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Patl_0466 f3d0ee228bec92f79a6301d9620015b1 1113 SUPERFAMILY SSF51556 736 1031 7.71E-42 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_0466 f3d0ee228bec92f79a6301d9620015b1 1113 Pfam PF07676 WD40-like Beta Propeller Repeat 265 288 0.016 T 11-10-2018 IPR011659 WD40-like Beta Propeller Patl_0466 f3d0ee228bec92f79a6301d9620015b1 1113 Pfam PF07676 WD40-like Beta Propeller Repeat 150 163 0.2 T 11-10-2018 IPR011659 WD40-like Beta Propeller Patl_0466 f3d0ee228bec92f79a6301d9620015b1 1113 Pfam PF07676 WD40-like Beta Propeller Repeat 102 131 3.0E-8 T 11-10-2018 IPR011659 WD40-like Beta Propeller Patl_0466 f3d0ee228bec92f79a6301d9620015b1 1113 Pfam PF07676 WD40-like Beta Propeller Repeat 203 225 1.6E-4 T 11-10-2018 IPR011659 WD40-like Beta Propeller Patl_0466 f3d0ee228bec92f79a6301d9620015b1 1113 Pfam PF07676 WD40-like Beta Propeller Repeat 418 436 0.0072 T 11-10-2018 IPR011659 WD40-like Beta Propeller Patl_0466 f3d0ee228bec92f79a6301d9620015b1 1113 Pfam PF01979 Amidohydrolase family 960 1066 4.5E-12 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Patl_0466 f3d0ee228bec92f79a6301d9620015b1 1113 Gene3D G3DSA:2.120.10.60 58 175 1.9E-20 T 11-10-2018 Patl_0466 f3d0ee228bec92f79a6301d9620015b1 1113 Gene3D G3DSA:3.20.20.140 744 1027 9.7E-30 T 11-10-2018 Patl_0466 f3d0ee228bec92f79a6301d9620015b1 1113 SUPERFAMILY SSF82171 149 582 9.61E-43 T 11-10-2018 Patl_0466 f3d0ee228bec92f79a6301d9620015b1 1113 Gene3D G3DSA:2.30.40.10 677 743 3.9E-11 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Patl_0466 f3d0ee228bec92f79a6301d9620015b1 1113 Gene3D G3DSA:2.120.10.30 386 637 2.9E-22 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Patl_0466 f3d0ee228bec92f79a6301d9620015b1 1113 SUPERFAMILY SSF51338 678 1067 2.66E-16 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Patl_0466 f3d0ee228bec92f79a6301d9620015b1 1113 Gene3D G3DSA:2.120.10.30 178 373 9.6E-16 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Patl_0466 f3d0ee228bec92f79a6301d9620015b1 1113 SUPERFAMILY SSF82171 54 164 7.46E-20 T 11-10-2018 Patl_0105 401efdff51338d9b48b95b3c76c03dcb 396 Gene3D G3DSA:1.20.140.10 239 396 5.5E-34 T 11-10-2018 Patl_0105 401efdff51338d9b48b95b3c76c03dcb 396 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 393 1.0E-18 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_0105 401efdff51338d9b48b95b3c76c03dcb 396 SUPERFAMILY SSF56645 4 247 1.22E-73 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_0105 401efdff51338d9b48b95b3c76c03dcb 396 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 222 1.8E-20 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Patl_0105 401efdff51338d9b48b95b3c76c03dcb 396 Gene3D G3DSA:2.40.110.10 128 238 1.5E-36 T 11-10-2018 Patl_0105 401efdff51338d9b48b95b3c76c03dcb 396 Gene3D G3DSA:1.10.540.10 5 122 6.9E-28 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Patl_0105 401efdff51338d9b48b95b3c76c03dcb 396 SUPERFAMILY SSF47203 235 396 2.9E-22 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_0105 401efdff51338d9b48b95b3c76c03dcb 396 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 122 1.6E-19 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Patl_3712 27c205d55240bd75a9c57da57b4f1937 572 Gene3D G3DSA:2.40.50.460 450 572 1.5E-11 T 11-10-2018 Patl_3712 27c205d55240bd75a9c57da57b4f1937 572 Gene3D G3DSA:3.90.1640.30 43 322 1.4E-86 T 11-10-2018 Patl_3712 27c205d55240bd75a9c57da57b4f1937 572 SUPERFAMILY SSF64182 44 459 7.85E-113 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily Patl_3712 27c205d55240bd75a9c57da57b4f1937 572 Pfam PF01368 DHH family 70 201 8.2E-9 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Patl_3712 27c205d55240bd75a9c57da57b4f1937 572 Pfam PF02272 DHHA1 domain 318 447 7.2E-27 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Patl_3712 27c205d55240bd75a9c57da57b4f1937 572 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 18 567 9.4E-156 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 Patl_3712 27c205d55240bd75a9c57da57b4f1937 572 Gene3D G3DSA:3.10.310.30 323 449 7.4E-30 T 11-10-2018 Patl_3907 f663464afcd8d7bd9b74c681a03d6969 489 Gene3D G3DSA:3.30.465.10 142 478 4.1E-52 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Patl_3907 f663464afcd8d7bd9b74c681a03d6969 489 Gene3D G3DSA:3.40.462.20 244 450 4.1E-52 T 11-10-2018 Patl_3907 f663464afcd8d7bd9b74c681a03d6969 489 Pfam PF01565 FAD binding domain 75 211 2.1E-25 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Patl_3907 f663464afcd8d7bd9b74c681a03d6969 489 SUPERFAMILY SSF56176 49 243 7.01E-43 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Patl_3907 f663464afcd8d7bd9b74c681a03d6969 489 Gene3D G3DSA:3.30.43.10 47 128 2.3E-17 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Patl_2405 7e9adcf72495418cf20a7ad33130c647 443 Gene3D G3DSA:2.40.420.20 354 428 1.1E-10 T 11-10-2018 Patl_2405 7e9adcf72495418cf20a7ad33130c647 443 Gene3D G3DSA:2.40.50.100 236 284 6.2E-14 T 11-10-2018 Patl_2405 7e9adcf72495418cf20a7ad33130c647 443 Gene3D G3DSA:2.40.50.100 96 135 5.0E-6 T 11-10-2018 Patl_2405 7e9adcf72495418cf20a7ad33130c647 443 Gene3D G3DSA:2.40.30.170 78 95 5.0E-6 T 11-10-2018 Patl_2405 7e9adcf72495418cf20a7ad33130c647 443 Gene3D G3DSA:2.40.30.170 285 343 6.2E-14 T 11-10-2018 Patl_2405 7e9adcf72495418cf20a7ad33130c647 443 Pfam PF13437 HlyD family secretion protein 254 343 2.3E-10 T 11-10-2018 Patl_2405 7e9adcf72495418cf20a7ad33130c647 443 Gene3D G3DSA:1.10.287.470 161 235 6.2E-14 T 11-10-2018 Patl_0231 ef590071a9022d431531fd6dae232265 689 Pfam PF00263 Bacterial type II and III secretion system protein 456 617 6.3E-53 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 Patl_0231 ef590071a9022d431531fd6dae232265 689 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 562 595 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 Patl_0231 ef590071a9022d431531fd6dae232265 689 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 38 626 1.2E-161 T 11-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 Patl_0231 ef590071a9022d431531fd6dae232265 689 Pfam PF03958 Bacterial type II/III secretion system short domain 198 266 1.5E-12 T 11-10-2018 IPR005644 NolW-like Patl_0231 ef590071a9022d431531fd6dae232265 689 Pfam PF03958 Bacterial type II/III secretion system short domain 273 351 2.0E-17 T 11-10-2018 IPR005644 NolW-like Patl_0231 ef590071a9022d431531fd6dae232265 689 Pfam PF03958 Bacterial type II/III secretion system short domain 133 194 2.6E-8 T 11-10-2018 IPR005644 NolW-like Patl_0231 ef590071a9022d431531fd6dae232265 689 Gene3D G3DSA:3.30.1370.120 28 193 5.4E-51 T 11-10-2018 IPR038591 NolW-like superfamily Patl_0231 ef590071a9022d431531fd6dae232265 689 Gene3D G3DSA:3.30.1370.120 266 353 2.2E-17 T 11-10-2018 IPR038591 NolW-like superfamily Patl_0231 ef590071a9022d431531fd6dae232265 689 Gene3D G3DSA:3.30.1370.120 196 265 4.0E-18 T 11-10-2018 IPR038591 NolW-like superfamily Patl_0231 ef590071a9022d431531fd6dae232265 689 PRINTS PR00811 Bacterial general secretion pathway protein D signature 604 618 8.1E-37 T 11-10-2018 IPR001775 GspD/PilQ family Patl_0231 ef590071a9022d431531fd6dae232265 689 PRINTS PR00811 Bacterial general secretion pathway protein D signature 581 599 8.1E-37 T 11-10-2018 IPR001775 GspD/PilQ family Patl_0231 ef590071a9022d431531fd6dae232265 689 PRINTS PR00811 Bacterial general secretion pathway protein D signature 487 497 8.1E-37 T 11-10-2018 IPR001775 GspD/PilQ family Patl_0231 ef590071a9022d431531fd6dae232265 689 PRINTS PR00811 Bacterial general secretion pathway protein D signature 351 361 8.1E-37 T 11-10-2018 IPR001775 GspD/PilQ family Patl_0231 ef590071a9022d431531fd6dae232265 689 PRINTS PR00811 Bacterial general secretion pathway protein D signature 452 476 8.1E-37 T 11-10-2018 IPR001775 GspD/PilQ family Patl_0172 a1cfadeea3cc2c18553f41226050d48e 373 Gene3D G3DSA:1.25.40.10 150 280 2.7E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0172 a1cfadeea3cc2c18553f41226050d48e 373 SUPERFAMILY SSF48452 200 348 1.56E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0172 a1cfadeea3cc2c18553f41226050d48e 373 Gene3D G3DSA:1.25.40.10 281 370 1.7E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0239 4810dfc6faad508d87327a3e8e77eb07 397 SUPERFAMILY SSF53067 1 143 1.94E-36 T 11-10-2018 Patl_0239 4810dfc6faad508d87327a3e8e77eb07 397 Gene3D G3DSA:3.30.1360.100 314 397 1.1E-20 T 11-10-2018 Patl_0239 4810dfc6faad508d87327a3e8e77eb07 397 Gene3D G3DSA:3.30.420.370 141 213 4.1E-76 T 11-10-2018 Patl_0239 4810dfc6faad508d87327a3e8e77eb07 397 SUPERFAMILY SSF53067 146 236 4.01E-20 T 11-10-2018 Patl_0239 4810dfc6faad508d87327a3e8e77eb07 397 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 4 397 1.9E-71 T 11-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 Patl_0239 4810dfc6faad508d87327a3e8e77eb07 397 Gene3D G3DSA:3.30.420.380 2 235 4.1E-76 T 11-10-2018 Patl_0239 4810dfc6faad508d87327a3e8e77eb07 397 Pfam PF05134 Type II secretion system (T2SS), protein L 4 237 1.3E-53 T 11-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain Patl_0239 4810dfc6faad508d87327a3e8e77eb07 397 PIRSF PIRSF015761 36 396 4.5E-22 T 11-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 Patl_0239 4810dfc6faad508d87327a3e8e77eb07 397 Pfam PF12693 GspL periplasmic domain 246 397 2.8E-25 T 11-10-2018 IPR025691 GspL periplasmic domain Patl_0311 02a8a575f0bc8aaa2ee4201793f92364 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 62 697 3.6E-81 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 Patl_0311 02a8a575f0bc8aaa2ee4201793f92364 697 Pfam PF00593 TonB dependent receptor 248 696 2.3E-35 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0311 02a8a575f0bc8aaa2ee4201793f92364 697 Gene3D G3DSA:2.170.130.10 42 167 9.9E-32 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_0311 02a8a575f0bc8aaa2ee4201793f92364 697 Gene3D G3DSA:2.40.170.20 168 697 4.9E-127 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_0311 02a8a575f0bc8aaa2ee4201793f92364 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 160 1.3E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0311 02a8a575f0bc8aaa2ee4201793f92364 697 SUPERFAMILY SSF56935 36 697 2.47E-113 T 11-10-2018 Patl_0286 a8b673fa1c7b863ce40362ce6de50586 450 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 119 132 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Patl_0286 a8b673fa1c7b863ce40362ce6de50586 450 SUPERFAMILY SSF53223 2 193 2.88E-73 T 11-10-2018 Patl_0286 a8b673fa1c7b863ce40362ce6de50586 450 PIRSF PIRSF000185 19 450 1.6E-113 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 Patl_0286 a8b673fa1c7b863ce40362ce6de50586 450 Gene3D G3DSA:1.10.285.10 3 386 3.0E-161 T 11-10-2018 Patl_0286 a8b673fa1c7b863ce40362ce6de50586 450 Gene3D G3DSA:3.40.50.10860 52 187 3.0E-161 T 11-10-2018 Patl_0286 a8b673fa1c7b863ce40362ce6de50586 450 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 54 182 4.8E-51 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Patl_0286 a8b673fa1c7b863ce40362ce6de50586 450 Gene3D G3DSA:1.10.285.10 389 450 2.3E-8 T 11-10-2018 Patl_0286 a8b673fa1c7b863ce40362ce6de50586 450 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 199 448 1.2E-80 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Patl_0286 a8b673fa1c7b863ce40362ce6de50586 450 SUPERFAMILY SSF51735 199 449 5.24E-70 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0286 a8b673fa1c7b863ce40362ce6de50586 450 Gene3D G3DSA:3.40.50.720 206 375 3.0E-161 T 11-10-2018 Patl_0286 a8b673fa1c7b863ce40362ce6de50586 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 374 385 3.3E-28 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Patl_0286 a8b673fa1c7b863ce40362ce6de50586 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 232 252 3.3E-28 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Patl_0286 a8b673fa1c7b863ce40362ce6de50586 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 190 212 3.3E-28 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Patl_0286 a8b673fa1c7b863ce40362ce6de50586 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 111 125 3.3E-28 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Patl_0286 a8b673fa1c7b863ce40362ce6de50586 450 SMART SM00839 201 448 2.0E-73 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Patl_3611 24456f2d1689cddcc7d9a5a398c62379 511 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 296 1.1E-79 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3611 24456f2d1689cddcc7d9a5a398c62379 511 SUPERFAMILY SSF64158 79 307 2.35E-84 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3611 24456f2d1689cddcc7d9a5a398c62379 511 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 7 507 5.1E-223 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3611 24456f2d1689cddcc7d9a5a398c62379 511 PIRSF PIRSF001492 1 509 6.9E-202 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3611 24456f2d1689cddcc7d9a5a398c62379 511 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 508 49.277 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3611 24456f2d1689cddcc7d9a5a398c62379 511 Gene3D G3DSA:3.40.720.10 8 504 2.6E-211 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_3611 24456f2d1689cddcc7d9a5a398c62379 511 SUPERFAMILY SSF53649 6 506 5.89E-74 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_3611 24456f2d1689cddcc7d9a5a398c62379 511 Pfam PF01676 Metalloenzyme superfamily 6 496 8.0E-80 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Patl_3611 24456f2d1689cddcc7d9a5a398c62379 511 Gene3D G3DSA:3.40.1450.10 79 309 2.6E-211 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_0727 4459c146dce08eba089ddc6d9c81a1aa 372 SUPERFAMILY SSF53335 3 367 5.26E-61 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_0727 4459c146dce08eba089ddc6d9c81a1aa 372 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 8 364 4.9E-43 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Patl_0727 4459c146dce08eba089ddc6d9c81a1aa 372 Gene3D G3DSA:3.40.50.150 8 359 9.2E-62 T 11-10-2018 Patl_0727 4459c146dce08eba089ddc6d9c81a1aa 372 Gene3D G3DSA:3.90.120.10 171 355 9.2E-62 T 11-10-2018 Patl_0727 4459c146dce08eba089ddc6d9c81a1aa 372 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 5 21 3.0E-13 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Patl_0727 4459c146dce08eba089ddc6d9c81a1aa 372 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 175 188 3.0E-13 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Patl_0727 4459c146dce08eba089ddc6d9c81a1aa 372 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 128 142 3.0E-13 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Patl_0727 4459c146dce08eba089ddc6d9c81a1aa 372 Pfam PF00145 C-5 cytosine-specific DNA methylase 6 364 2.1E-48 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Patl_1792 48de93b288da4f26957d62b12c1d34d9 473 Pfam PF00483 Nucleotidyl transferase 2 284 2.4E-70 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Patl_1792 48de93b288da4f26957d62b12c1d34d9 473 Gene3D G3DSA:2.60.120.10 347 457 6.3E-18 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_1792 48de93b288da4f26957d62b12c1d34d9 473 Gene3D G3DSA:3.90.550.10 1 346 7.0E-120 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_1792 48de93b288da4f26957d62b12c1d34d9 473 SUPERFAMILY SSF51182 184 469 3.62E-88 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_1792 48de93b288da4f26957d62b12c1d34d9 473 Pfam PF01050 Mannose-6-phosphate isomerase 315 465 3.7E-76 T 11-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Patl_1792 48de93b288da4f26957d62b12c1d34d9 473 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1 469 3.7E-228 T 11-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Patl_1792 48de93b288da4f26957d62b12c1d34d9 473 SUPERFAMILY SSF53448 1 279 5.2E-72 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_1324 dcfd8a36f31dc2cd2fd8698ba7d28bf7 185 Pfam PF12915 Protein of unknown function (DUF3833) 14 174 7.4E-67 T 11-10-2018 IPR024409 Protein of unknown function DUF3833 Patl_0383 7d6a80370ab950712c497295ff33dec0 563 ProSitePatterns PS00149 Sulfatases signature 2. 122 132 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_0383 7d6a80370ab950712c497295ff33dec0 563 SUPERFAMILY SSF53649 20 539 3.2E-144 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_0383 7d6a80370ab950712c497295ff33dec0 563 Gene3D G3DSA:3.40.720.10 18 464 4.0E-137 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_0383 7d6a80370ab950712c497295ff33dec0 563 Gene3D G3DSA:3.30.1120.10 466 549 1.8E-21 T 11-10-2018 Patl_0383 7d6a80370ab950712c497295ff33dec0 563 Pfam PF00884 Sulfatase 21 435 1.9E-77 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_2608 da4c5c809f0747ba9d4baab5f191909c 263 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 11 38 8.0E-37 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Patl_2608 da4c5c809f0747ba9d4baab5f191909c 263 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 108 134 8.0E-37 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Patl_2608 da4c5c809f0747ba9d4baab5f191909c 263 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 90 108 8.0E-37 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Patl_2608 da4c5c809f0747ba9d4baab5f191909c 263 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 165 193 8.0E-37 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Patl_2608 da4c5c809f0747ba9d4baab5f191909c 263 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 251 15.889 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Patl_2608 da4c5c809f0747ba9d4baab5f191909c 263 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 12 237 4.4E-62 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Patl_2608 da4c5c809f0747ba9d4baab5f191909c 263 ProSitePatterns PS01218 TatC family signature. 165 184 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site Patl_2608 da4c5c809f0747ba9d4baab5f191909c 263 Pfam PF00902 Sec-independent protein translocase protein (TatC) 15 232 2.8E-63 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Patl_3872 978a566cf7686d280e53eabef208c808 520 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 380 400 - T 11-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site Patl_3872 978a566cf7686d280e53eabef208c808 520 Gene3D G3DSA:3.40.630.30 15 232 7.3E-55 T 11-10-2018 Patl_3872 978a566cf7686d280e53eabef208c808 520 Pfam PF00583 Acetyltransferase (GNAT) family 56 150 7.0E-8 T 11-10-2018 IPR000182 GNAT domain Patl_3872 978a566cf7686d280e53eabef208c808 520 Gene3D G3DSA:3.60.110.10 233 519 5.0E-56 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Patl_3872 978a566cf7686d280e53eabef208c808 520 Pfam PF00795 Carbon-nitrogen hydrolase 236 496 3.1E-33 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Patl_3872 978a566cf7686d280e53eabef208c808 520 SUPERFAMILY SSF56317 233 501 1.02E-58 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Patl_3872 978a566cf7686d280e53eabef208c808 520 SUPERFAMILY SSF55729 20 151 1.25E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_0912 2703df32c635a2e099ba48481d64ac12 299 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 191 219 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_0912 2703df32c635a2e099ba48481d64ac12 299 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 64 297 2.1E-56 T 11-10-2018 Patl_0912 2703df32c635a2e099ba48481d64ac12 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 56 73 6.1E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0912 2703df32c635a2e099ba48481d64ac12 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 194 6.1E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0912 2703df32c635a2e099ba48481d64ac12 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 242 6.1E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0912 2703df32c635a2e099ba48481d64ac12 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 143 6.1E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0912 2703df32c635a2e099ba48481d64ac12 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 223 6.1E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0912 2703df32c635a2e099ba48481d64ac12 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 260 280 6.1E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0912 2703df32c635a2e099ba48481d64ac12 299 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 143 2.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0912 2703df32c635a2e099ba48481d64ac12 299 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 184 192 2.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0912 2703df32c635a2e099ba48481d64ac12 299 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 204 223 2.2E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0912 2703df32c635a2e099ba48481d64ac12 299 Gene3D G3DSA:3.40.50.720 6 299 9.5E-86 T 11-10-2018 Patl_0912 2703df32c635a2e099ba48481d64ac12 299 SUPERFAMILY SSF51735 53 298 2.95E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3864 891f4cde106077b049cec19e9a39cb82 327 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 86 312 3.1E-35 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Patl_3864 891f4cde106077b049cec19e9a39cb82 327 Pfam PF04539 Sigma-70 region 3 169 243 8.5E-23 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Patl_3864 891f4cde106077b049cec19e9a39cb82 327 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 43 323 1.2E-137 T 11-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_3864 891f4cde106077b049cec19e9a39cb82 327 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 113 126 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3864 891f4cde106077b049cec19e9a39cb82 327 SUPERFAMILY SSF88946 51 159 2.88E-44 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Patl_3864 891f4cde106077b049cec19e9a39cb82 327 Gene3D G3DSA:1.10.10.10 162 237 3.1E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3864 891f4cde106077b049cec19e9a39cb82 327 Gene3D G3DSA:1.10.601.10 8 158 3.8E-46 T 11-10-2018 Patl_3864 891f4cde106077b049cec19e9a39cb82 327 SUPERFAMILY SSF88659 219 317 1.47E-24 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_3864 891f4cde106077b049cec19e9a39cb82 327 Pfam PF04542 Sigma-70 region 2 90 158 8.7E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Patl_3864 891f4cde106077b049cec19e9a39cb82 327 Pfam PF00140 Sigma-70 factor, region 1.2 51 84 1.5E-11 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_3864 891f4cde106077b049cec19e9a39cb82 327 Gene3D G3DSA:1.10.10.10 239 315 2.4E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3864 891f4cde106077b049cec19e9a39cb82 327 Pfam PF04545 Sigma-70, region 4 257 309 9.0E-17 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Patl_3864 891f4cde106077b049cec19e9a39cb82 327 PRINTS PR00046 Major sigma-70 factor signature 261 273 2.2E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3864 891f4cde106077b049cec19e9a39cb82 327 PRINTS PR00046 Major sigma-70 factor signature 282 297 2.2E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3864 891f4cde106077b049cec19e9a39cb82 327 PRINTS PR00046 Major sigma-70 factor signature 297 308 2.2E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3864 891f4cde106077b049cec19e9a39cb82 327 PRINTS PR00046 Major sigma-70 factor signature 137 145 2.2E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3864 891f4cde106077b049cec19e9a39cb82 327 PRINTS PR00046 Major sigma-70 factor signature 113 126 2.2E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_3864 891f4cde106077b049cec19e9a39cb82 327 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 10 323 39.091 T 11-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_3864 891f4cde106077b049cec19e9a39cb82 327 SUPERFAMILY SSF88659 162 236 8.28E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_3864 891f4cde106077b049cec19e9a39cb82 327 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 282 308 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 Pfam PF00072 Response regulator receiver domain 1021 1135 8.4E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 Pfam PF00512 His Kinase A (phospho-acceptor) domain 784 849 6.1E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 SUPERFAMILY SSF55874 840 999 1.96E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 Gene3D G3DSA:3.30.565.10 846 999 2.9E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 SUPERFAMILY SSF52172 1016 1137 6.55E-22 T 11-10-2018 IPR011006 CheY-like superfamily Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 Pfam PF12860 PAS fold 616 729 1.1E-41 T 11-10-2018 Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 Pfam PF00474 Sodium:solute symporter family 45 437 9.4E-6 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 SUPERFAMILY SSF55785 622 734 4.65E-8 T 11-10-2018 IPR035965 PAS domain superfamily Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 Gene3D G3DSA:1.10.287.130 751 845 6.6E-14 T 11-10-2018 Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 894 999 7.3E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 Gene3D G3DSA:3.30.450.20 599 730 9.1E-10 T 11-10-2018 Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 SMART SM00387 893 1001 8.8E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 SMART SM00448 1019 1135 2.9E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 Gene3D G3DSA:1.20.1730.10 29 509 5.1E-16 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 PRINTS PR00344 Bacterial sensor protein C-terminal signature 961 979 7.0E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 PRINTS PR00344 Bacterial sensor protein C-terminal signature 985 998 7.0E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 PRINTS PR00344 Bacterial sensor protein C-terminal signature 929 943 7.0E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 PRINTS PR00344 Bacterial sensor protein C-terminal signature 947 957 7.0E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 SUPERFAMILY SSF47384 771 850 6.47E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 Gene3D G3DSA:3.40.50.2300 1013 1145 2.1E-22 T 11-10-2018 Patl_0523 b6001de87fc2ae0b360d418c83037911 1145 SMART SM00388 784 849 2.1E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_4180 d756be5650bc141e51571d3de1ab344d 534 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_4180 d756be5650bc141e51571d3de1ab344d 534 SUPERFAMILY SSF52540 2 249 3.76E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4180 d756be5650bc141e51571d3de1ab344d 534 Pfam PF12848 ABC transporter 224 306 4.6E-20 T 11-10-2018 IPR032781 ABC-transporter extension domain Patl_4180 d756be5650bc141e51571d3de1ab344d 534 SMART SM00382 26 238 1.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_4180 d756be5650bc141e51571d3de1ab344d 534 SMART SM00382 344 512 4.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_4180 d756be5650bc141e51571d3de1ab344d 534 SUPERFAMILY SSF52540 297 525 1.55E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4180 d756be5650bc141e51571d3de1ab344d 534 Pfam PF00005 ABC transporter 340 467 3.3E-16 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_4180 d756be5650bc141e51571d3de1ab344d 534 Pfam PF00005 ABC transporter 18 184 1.0E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_4180 d756be5650bc141e51571d3de1ab344d 534 Gene3D G3DSA:3.40.50.300 1 264 9.4E-49 T 11-10-2018 Patl_4180 d756be5650bc141e51571d3de1ab344d 534 Gene3D G3DSA:3.40.50.300 281 534 3.9E-49 T 11-10-2018 Patl_2721 08a055f67e0831bb8c6ee2a04e356918 62 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 10 62 1.0E-23 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 Patl_2721 08a055f67e0831bb8c6ee2a04e356918 62 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 11 62 2.1E-19 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 Patl_2721 08a055f67e0831bb8c6ee2a04e356918 62 SUPERFAMILY SSF143011 3 61 1.05E-15 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Patl_2721 08a055f67e0831bb8c6ee2a04e356918 62 Gene3D G3DSA:3.30.2310.20 1 62 4.6E-21 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Patl_3212 acc277af07eae7c46b2322a55fbbb6c8 425 SUPERFAMILY SSF49785 76 180 3.56E-17 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_3212 acc277af07eae7c46b2322a55fbbb6c8 425 Gene3D G3DSA:2.60.120.260 74 189 1.2E-14 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_3212 acc277af07eae7c46b2322a55fbbb6c8 425 Pfam PF00754 F5/8 type C domain 88 173 2.4E-9 T 11-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain Patl_4006 bc316c5e6747dcb78e9e2c69fb4292be 394 Pfam PF00534 Glycosyl transferases group 1 203 352 2.5E-26 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Patl_4006 bc316c5e6747dcb78e9e2c69fb4292be 394 Pfam PF13439 Glycosyltransferase Family 4 18 166 2.9E-14 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Patl_4006 bc316c5e6747dcb78e9e2c69fb4292be 394 SUPERFAMILY SSF53756 15 379 4.93E-61 T 11-10-2018 Patl_4006 bc316c5e6747dcb78e9e2c69fb4292be 394 Gene3D G3DSA:3.40.50.2000 12 173 9.3E-14 T 11-10-2018 Patl_4006 bc316c5e6747dcb78e9e2c69fb4292be 394 Gene3D G3DSA:3.40.50.2000 174 353 1.0E-33 T 11-10-2018 Patl_1646 5c9ef9dbb87fe58ea2cac7e4fe59b7ca 317 SUPERFAMILY SSF55174 14 67 4.21E-13 T 11-10-2018 Patl_1646 5c9ef9dbb87fe58ea2cac7e4fe59b7ca 317 Gene3D G3DSA:3.30.70.1560 143 216 3.1E-51 T 11-10-2018 Patl_1646 5c9ef9dbb87fe58ea2cac7e4fe59b7ca 317 SUPERFAMILY SSF55120 77 238 6.91E-37 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1646 5c9ef9dbb87fe58ea2cac7e4fe59b7ca 317 SMART SM00363 14 71 3.1E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1646 5c9ef9dbb87fe58ea2cac7e4fe59b7ca 317 Pfam PF01479 S4 domain 15 59 5.0E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1646 5c9ef9dbb87fe58ea2cac7e4fe59b7ca 317 Gene3D G3DSA:3.10.290.10 11 68 2.3E-20 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Patl_1646 5c9ef9dbb87fe58ea2cac7e4fe59b7ca 317 Pfam PF00849 RNA pseudouridylate synthase 78 203 5.8E-13 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1646 5c9ef9dbb87fe58ea2cac7e4fe59b7ca 317 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 113 127 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Patl_1646 5c9ef9dbb87fe58ea2cac7e4fe59b7ca 317 Gene3D G3DSA:3.30.70.580 80 238 3.1E-51 T 11-10-2018 Patl_1646 5c9ef9dbb87fe58ea2cac7e4fe59b7ca 317 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 82 234 1.3E-43 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Patl_4040 21230aa509d5e89a3486cd0eed793a9a 252 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 3 252 3.2E-79 T 11-10-2018 IPR026387 Outer membrane protein Patl_1477 31155138e864b65ac3e354d63a8ddf57 174 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 27 164 1.6E-23 T 11-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like Patl_1477 31155138e864b65ac3e354d63a8ddf57 174 SUPERFAMILY SSF55298 25 171 9.74E-43 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Patl_1477 31155138e864b65ac3e354d63a8ddf57 174 Gene3D G3DSA:3.30.1330.40 22 171 5.3E-52 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Patl_2179 934f70d4c42724ef3b3544bc1ad35d1d 481 Pfam PF00875 DNA photolyase 3 168 7.9E-48 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 Patl_2179 934f70d4c42724ef3b3544bc1ad35d1d 481 SUPERFAMILY SSF52425 3 176 8.5E-45 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 Patl_2179 934f70d4c42724ef3b3544bc1ad35d1d 481 Gene3D G3DSA:3.40.50.620 4 211 1.1E-64 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_2179 934f70d4c42724ef3b3544bc1ad35d1d 481 Gene3D G3DSA:1.25.40.80 132 296 1.1E-64 T 11-10-2018 Patl_2179 934f70d4c42724ef3b3544bc1ad35d1d 481 Gene3D G3DSA:1.10.579.10 300 480 1.7E-74 T 11-10-2018 Patl_2179 934f70d4c42724ef3b3544bc1ad35d1d 481 SUPERFAMILY SSF48173 198 474 7.59E-96 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Patl_2179 934f70d4c42724ef3b3544bc1ad35d1d 481 Pfam PF03441 FAD binding domain of DNA photolyase 282 474 1.6E-75 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 Patl_2179 934f70d4c42724ef3b3544bc1ad35d1d 481 PRINTS PR00147 DNA photolyase signature 143 159 4.5E-25 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Patl_2179 934f70d4c42724ef3b3544bc1ad35d1d 481 PRINTS PR00147 DNA photolyase signature 391 405 4.5E-25 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Patl_2179 934f70d4c42724ef3b3544bc1ad35d1d 481 PRINTS PR00147 DNA photolyase signature 332 348 4.5E-25 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Patl_2179 934f70d4c42724ef3b3544bc1ad35d1d 481 PRINTS PR00147 DNA photolyase signature 352 370 4.5E-25 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Patl_3793 491962f4b80214bbb3f99f9c37777f2f 482 Pfam PF01966 HD domain 63 130 3.5E-8 T 11-10-2018 IPR006674 HD domain Patl_3793 491962f4b80214bbb3f99f9c37777f2f 482 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 482 41.755 T 11-10-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 Patl_3793 491962f4b80214bbb3f99f9c37777f2f 482 Pfam PF13286 Phosphohydrolase-associated domain 431 476 3.6E-5 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain Patl_3793 491962f4b80214bbb3f99f9c37777f2f 482 Gene3D G3DSA:1.10.3210.10 28 244 8.0E-81 T 11-10-2018 Patl_3793 491962f4b80214bbb3f99f9c37777f2f 482 SMART SM00471 59 261 4.3E-9 T 11-10-2018 IPR003607 HD/PDEase domain Patl_3793 491962f4b80214bbb3f99f9c37777f2f 482 Gene3D G3DSA:1.10.3550.10 118 471 8.0E-81 T 11-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal Patl_3793 491962f4b80214bbb3f99f9c37777f2f 482 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 28 479 6.1E-112 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 Patl_3793 491962f4b80214bbb3f99f9c37777f2f 482 SUPERFAMILY SSF109604 26 479 1.34E-59 T 11-10-2018 Patl_3793 491962f4b80214bbb3f99f9c37777f2f 482 Gene3D G3DSA:1.10.3410.10 245 374 8.0E-81 T 11-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 Patl_4231 a145d24e291c56dcd2e5831073598285 240 Gene3D G3DSA:3.40.50.2020 112 238 7.3E-14 T 11-10-2018 Patl_4231 a145d24e291c56dcd2e5831073598285 240 SUPERFAMILY SSF53271 77 238 2.13E-23 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Patl_0976 e7f59cec5c2fc495871f67479866bbc3 116 Gene3D G3DSA:3.20.160.10 1 113 9.2E-49 T 11-10-2018 IPR038604 Type III effector HopJ superfamily Patl_0976 e7f59cec5c2fc495871f67479866bbc3 116 Pfam PF08888 HopJ type III effector protein 4 111 2.3E-48 T 11-10-2018 IPR014984 HopJ type III effector protein Patl_0518 a9fa88bf8bfda690a7635bf33b961f8b 235 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 42.123 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Patl_0518 a9fa88bf8bfda690a7635bf33b961f8b 235 Gene3D G3DSA:3.40.50.1580 1 234 5.3E-63 T 11-10-2018 Patl_0518 a9fa88bf8bfda690a7635bf33b961f8b 235 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 1.2E-77 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 Patl_0518 a9fa88bf8bfda690a7635bf33b961f8b 235 Pfam PF01048 Phosphorylase superfamily 2 227 2.2E-47 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Patl_0518 a9fa88bf8bfda690a7635bf33b961f8b 235 SUPERFAMILY SSF53167 1 230 5.24E-65 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Patl_0415 8f80a93142560276c5db1b846c021e36 248 Gene3D G3DSA:3.40.50.80 98 248 3.5E-40 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_0415 8f80a93142560276c5db1b846c021e36 248 SUPERFAMILY SSF52343 105 248 1.18E-34 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_0415 8f80a93142560276c5db1b846c021e36 248 SUPERFAMILY SSF63380 3 98 5.02E-22 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Patl_0415 8f80a93142560276c5db1b846c021e36 248 Pfam PF00175 Oxidoreductase NAD-binding domain 112 222 3.7E-15 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Patl_0415 8f80a93142560276c5db1b846c021e36 248 Pfam PF00970 Oxidoreductase FAD-binding domain 12 96 4.2E-5 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Patl_0415 8f80a93142560276c5db1b846c021e36 248 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 9.8E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Patl_0415 8f80a93142560276c5db1b846c021e36 248 PRINTS PR00410 Phenol hydroxylase reductase family signature 209 217 9.8E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Patl_0415 8f80a93142560276c5db1b846c021e36 248 PRINTS PR00410 Phenol hydroxylase reductase family signature 32 44 9.8E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Patl_0415 8f80a93142560276c5db1b846c021e36 248 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 9.8E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Patl_0415 8f80a93142560276c5db1b846c021e36 248 Gene3D G3DSA:2.40.30.10 1 97 4.5E-24 T 11-10-2018 Patl_1728 a823aa69365a21c9eb315f86778497b9 185 Pfam PF00156 Phosphoribosyl transferase domain 10 161 5.2E-12 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Patl_1728 a823aa69365a21c9eb315f86778497b9 185 Gene3D G3DSA:3.40.50.2020 1 181 2.5E-34 T 11-10-2018 Patl_1728 a823aa69365a21c9eb315f86778497b9 185 SUPERFAMILY SSF53271 2 160 1.61E-28 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Patl_2051 912e3d6d49c2d0fa2dc318ccf9ab98d6 408 Pfam PF01546 Peptidase family M20/M25/M40 79 406 2.9E-27 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 Patl_2051 912e3d6d49c2d0fa2dc318ccf9ab98d6 408 PIRSF PIRSF001235 7 408 1.3E-121 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Patl_2051 912e3d6d49c2d0fa2dc318ccf9ab98d6 408 SUPERFAMILY SSF53187 20 408 6.29E-73 T 11-10-2018 Patl_2051 912e3d6d49c2d0fa2dc318ccf9ab98d6 408 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 27 402 2.0E-110 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Patl_2051 912e3d6d49c2d0fa2dc318ccf9ab98d6 408 Pfam PF07687 Peptidase dimerisation domain 211 310 2.7E-6 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain Patl_2051 912e3d6d49c2d0fa2dc318ccf9ab98d6 408 Gene3D G3DSA:3.40.630.10 26 401 4.1E-129 T 11-10-2018 Patl_2051 912e3d6d49c2d0fa2dc318ccf9ab98d6 408 Gene3D G3DSA:3.30.70.360 214 326 4.1E-129 T 11-10-2018 Patl_2051 912e3d6d49c2d0fa2dc318ccf9ab98d6 408 SUPERFAMILY SSF55031 214 327 6.43E-25 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Patl_2870 eedd19e1b09bc6607f71ab7d48e00bc5 351 Gene3D G3DSA:2.40.420.20 42 346 2.3E-59 T 11-10-2018 Patl_2870 eedd19e1b09bc6607f71ab7d48e00bc5 351 SUPERFAMILY SSF111369 47 267 2.22E-30 T 11-10-2018 Patl_2870 eedd19e1b09bc6607f71ab7d48e00bc5 351 Gene3D G3DSA:2.40.30.170 43 269 2.3E-59 T 11-10-2018 Patl_2870 eedd19e1b09bc6607f71ab7d48e00bc5 351 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 346 8.1E-52 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Patl_2870 eedd19e1b09bc6607f71ab7d48e00bc5 351 Pfam PF13533 Biotin-lipoyl like 60 105 6.9E-10 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Patl_2870 eedd19e1b09bc6607f71ab7d48e00bc5 351 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 340 351 1.6E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Patl_2870 eedd19e1b09bc6607f71ab7d48e00bc5 351 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 69 89 1.6E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 Patl_2870 eedd19e1b09bc6607f71ab7d48e00bc5 351 Gene3D G3DSA:2.40.50.100 57 189 2.3E-59 T 11-10-2018 Patl_2870 eedd19e1b09bc6607f71ab7d48e00bc5 351 Pfam PF13437 HlyD family secretion protein 155 209 2.0E-6 T 11-10-2018 Patl_2870 eedd19e1b09bc6607f71ab7d48e00bc5 351 Gene3D G3DSA:1.10.287.470 91 150 2.3E-59 T 11-10-2018 Patl_0592 5db567d43cb538d5045ec0a82ab35143 125 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 68 120 5.1E-20 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Patl_0592 5db567d43cb538d5045ec0a82ab35143 125 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 67 121 3.9E-20 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Patl_0592 5db567d43cb538d5045ec0a82ab35143 125 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 69 97 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Patl_0592 5db567d43cb538d5045ec0a82ab35143 125 PRINTS PR01650 Bacterial translocase SecE signature 42 63 6.5E-30 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Patl_0592 5db567d43cb538d5045ec0a82ab35143 125 PRINTS PR01650 Bacterial translocase SecE signature 107 123 6.5E-30 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Patl_0592 5db567d43cb538d5045ec0a82ab35143 125 PRINTS PR01650 Bacterial translocase SecE signature 87 107 6.5E-30 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Patl_0592 5db567d43cb538d5045ec0a82ab35143 125 PRINTS PR01650 Bacterial translocase SecE signature 63 83 6.5E-30 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Patl_0592 5db567d43cb538d5045ec0a82ab35143 125 Hamap MF_00422 Protein translocase subunit SecE [secE]. 64 119 13.357 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Patl_0592 5db567d43cb538d5045ec0a82ab35143 125 Gene3D G3DSA:1.20.5.1030 64 121 1.2E-16 T 11-10-2018 IPR038379 SecE superfamily Patl_2064 d4ce7d27dd7ff5f2b04d55cebab8ac4d 318 SUPERFAMILY SSF52402 34 252 1.07E-50 T 11-10-2018 Patl_2064 d4ce7d27dd7ff5f2b04d55cebab8ac4d 318 Gene3D G3DSA:3.40.50.620 23 282 9.4E-44 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_2064 d4ce7d27dd7ff5f2b04d55cebab8ac4d 318 Pfam PF01171 PP-loop family 58 216 4.0E-13 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Patl_2064 d4ce7d27dd7ff5f2b04d55cebab8ac4d 318 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 12 288 55.898 T 11-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 Patl_3017 d76ef215288b34589f72df39d849b2b8 384 Gene3D G3DSA:3.40.630.30 177 335 4.2E-7 T 11-10-2018 Patl_3017 d76ef215288b34589f72df39d849b2b8 384 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 12 380 5.2E-150 T 11-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition Patl_3017 d76ef215288b34589f72df39d849b2b8 384 SUPERFAMILY SSF55729 183 349 6.97E-37 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_4054 0b5d60c0af0eb38de7108e7c80341fb0 191 SMART SM00507 75 128 1.1E-8 T 11-10-2018 IPR003615 HNH nuclease Patl_4054 0b5d60c0af0eb38de7108e7c80341fb0 191 Gene3D G3DSA:3.30.40.60 72 154 1.3E-20 T 11-10-2018 Patl_4054 0b5d60c0af0eb38de7108e7c80341fb0 191 Pfam PF14279 HNH endonuclease 88 138 2.2E-15 T 11-10-2018 IPR029471 HNH endonuclease 5 Patl_4128 a820c40fc791113efd38f29a2d9fe523 206 Gene3D G3DSA:3.40.30.10 4 203 2.1E-72 T 11-10-2018 Patl_4128 a820c40fc791113efd38f29a2d9fe523 206 SUPERFAMILY SSF52833 1 92 3.62E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_4128 a820c40fc791113efd38f29a2d9fe523 206 Gene3D G3DSA:1.20.1050.10 84 201 2.1E-72 T 11-10-2018 Patl_4128 a820c40fc791113efd38f29a2d9fe523 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 76 2.9E-12 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Patl_4128 a820c40fc791113efd38f29a2d9fe523 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 139 202 6.3E-8 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal Patl_4128 a820c40fc791113efd38f29a2d9fe523 206 SUPERFAMILY SSF47616 81 205 8.49E-23 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Patl_3091 806ad8986ca7c880651906d34e8c2f85 709 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Patl_3091 806ad8986ca7c880651906d34e8c2f85 709 PRINTS PR01005 Flagellar hook-associated protein signature 359 381 2.5E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Patl_3091 806ad8986ca7c880651906d34e8c2f85 709 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 2.5E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Patl_3091 806ad8986ca7c880651906d34e8c2f85 709 PRINTS PR01005 Flagellar hook-associated protein signature 150 174 2.5E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Patl_3091 806ad8986ca7c880651906d34e8c2f85 709 SUPERFAMILY SSF64518 159 708 1.44E-29 T 11-10-2018 Patl_3091 806ad8986ca7c880651906d34e8c2f85 709 Pfam PF00460 Flagella basal body rod protein 8 37 1.4E-5 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Patl_3091 806ad8986ca7c880651906d34e8c2f85 709 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 662 707 3.2E-9 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Patl_4206 6de12318420b45fc49784a9571266968 449 Gene3D G3DSA:3.50.50.60 4 317 6.4E-122 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_4206 6de12318420b45fc49784a9571266968 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.2E-29 T 11-10-2018 Patl_4206 6de12318420b45fc49784a9571266968 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 2.2E-29 T 11-10-2018 Patl_4206 6de12318420b45fc49784a9571266968 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 2.2E-29 T 11-10-2018 Patl_4206 6de12318420b45fc49784a9571266968 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 2.2E-29 T 11-10-2018 Patl_4206 6de12318420b45fc49784a9571266968 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 2.2E-29 T 11-10-2018 Patl_4206 6de12318420b45fc49784a9571266968 449 SUPERFAMILY SSF51905 2 362 1.26E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_4206 6de12318420b45fc49784a9571266968 449 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 448 6.9E-213 T 11-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 Patl_4206 6de12318420b45fc49784a9571266968 449 PIRSF PIRSF000350 1 445 1.1E-82 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Patl_4206 6de12318420b45fc49784a9571266968 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 7.7E-65 T 11-10-2018 Patl_4206 6de12318420b45fc49784a9571266968 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 7.7E-65 T 11-10-2018 Patl_4206 6de12318420b45fc49784a9571266968 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 7.7E-65 T 11-10-2018 Patl_4206 6de12318420b45fc49784a9571266968 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 7.7E-65 T 11-10-2018 Patl_4206 6de12318420b45fc49784a9571266968 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 7.7E-65 T 11-10-2018 Patl_4206 6de12318420b45fc49784a9571266968 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 7.7E-65 T 11-10-2018 Patl_4206 6de12318420b45fc49784a9571266968 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 7.7E-65 T 11-10-2018 Patl_4206 6de12318420b45fc49784a9571266968 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 7.7E-65 T 11-10-2018 Patl_4206 6de12318420b45fc49784a9571266968 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 7.7E-65 T 11-10-2018 Patl_4206 6de12318420b45fc49784a9571266968 449 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Patl_4206 6de12318420b45fc49784a9571266968 449 Gene3D G3DSA:3.50.50.60 143 260 6.4E-122 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_4206 6de12318420b45fc49784a9571266968 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 317 1.2E-69 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Patl_4206 6de12318420b45fc49784a9571266968 449 Gene3D G3DSA:3.30.390.30 337 449 2.4E-44 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Patl_4206 6de12318420b45fc49784a9571266968 449 SUPERFAMILY SSF55424 335 448 6.53E-32 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Patl_4206 6de12318420b45fc49784a9571266968 449 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 447 8.6E-32 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Patl_0600 1372f9d094ce0e4ef4cd291fb083bc9b 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 1.9E-68 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0600 1372f9d094ce0e4ef4cd291fb083bc9b 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0600 1372f9d094ce0e4ef4cd291fb083bc9b 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0600 1372f9d094ce0e4ef4cd291fb083bc9b 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0600 1372f9d094ce0e4ef4cd291fb083bc9b 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0600 1372f9d094ce0e4ef4cd291fb083bc9b 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0600 1372f9d094ce0e4ef4cd291fb083bc9b 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.2E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0600 1372f9d094ce0e4ef4cd291fb083bc9b 124 SUPERFAMILY SSF50249 3 123 5.14E-50 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_0600 1372f9d094ce0e4ef4cd291fb083bc9b 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0600 1372f9d094ce0e4ef4cd291fb083bc9b 124 PIRSF PIRSF002133 1 124 1.3E-53 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0600 1372f9d094ce0e4ef4cd291fb083bc9b 124 Pfam PF00164 Ribosomal protein S12/S23 13 123 3.6E-42 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0600 1372f9d094ce0e4ef4cd291fb083bc9b 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 37.991 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0600 1372f9d094ce0e4ef4cd291fb083bc9b 124 Gene3D G3DSA:2.40.50.140 1 124 6.8E-62 T 11-10-2018 Patl_1916 e95de32200fcffd83a68fbe2ffd946de 702 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 477 570 7.3E-24 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Patl_1916 e95de32200fcffd83a68fbe2ffd946de 702 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 606 695 3.0E-10 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Patl_1916 e95de32200fcffd83a68fbe2ffd946de 702 SUPERFAMILY SSF51735 293 473 1.45E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1916 e95de32200fcffd83a68fbe2ffd946de 702 Gene3D G3DSA:3.40.50.720 294 477 3.9E-68 T 11-10-2018 Patl_1916 e95de32200fcffd83a68fbe2ffd946de 702 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 217 2.1E-30 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Patl_1916 e95de32200fcffd83a68fbe2ffd946de 702 SUPERFAMILY SSF48179 477 619 8.5E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_1916 e95de32200fcffd83a68fbe2ffd946de 702 Gene3D G3DSA:3.90.226.10 4 281 4.6E-73 T 11-10-2018 Patl_1916 e95de32200fcffd83a68fbe2ffd946de 702 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 296 472 9.4E-64 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Patl_1916 e95de32200fcffd83a68fbe2ffd946de 702 Gene3D G3DSA:1.10.1040.50 479 702 2.4E-75 T 11-10-2018 Patl_1916 e95de32200fcffd83a68fbe2ffd946de 702 SUPERFAMILY SSF48179 601 697 7.65E-23 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_1916 e95de32200fcffd83a68fbe2ffd946de 702 SUPERFAMILY SSF52096 4 287 8.36E-51 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_1916 e95de32200fcffd83a68fbe2ffd946de 702 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 92 112 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Patl_0003 309fb93c1ac3a0682b280752d0d89ed6 363 SUPERFAMILY SSF52540 1 359 2.58E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0003 309fb93c1ac3a0682b280752d0d89ed6 363 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Patl_0003 309fb93c1ac3a0682b280752d0d89ed6 363 Gene3D G3DSA:1.20.1050.90 120 300 5.6E-78 T 11-10-2018 Patl_0003 309fb93c1ac3a0682b280752d0d89ed6 363 ProSitePatterns PS00618 RecF protein signature 2. 301 319 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Patl_0003 309fb93c1ac3a0682b280752d0d89ed6 363 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 358 1.6E-92 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Patl_0003 309fb93c1ac3a0682b280752d0d89ed6 363 Gene3D G3DSA:3.40.50.300 7 335 5.6E-78 T 11-10-2018 Patl_0003 309fb93c1ac3a0682b280752d0d89ed6 363 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 347 2.1E-29 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Patl_0003 309fb93c1ac3a0682b280752d0d89ed6 363 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 363 81.609 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Patl_0786 4d938fa6bcb09a850faa4047239d69eb 383 PIRSF PIRSF018266 45 383 7.0E-63 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Patl_0786 4d938fa6bcb09a850faa4047239d69eb 383 Gene3D G3DSA:3.55.50.30 308 382 1.1E-7 T 11-10-2018 Patl_0786 4d938fa6bcb09a850faa4047239d69eb 383 Gene3D G3DSA:2.60.120.1440 156 295 6.9E-27 T 11-10-2018 Patl_0786 4d938fa6bcb09a850faa4047239d69eb 383 Pfam PF16344 Domain of unknown function (DUF4974) 279 374 1.3E-7 T 11-10-2018 IPR032508 Protein FecR, C-terminal Patl_0786 4d938fa6bcb09a850faa4047239d69eb 383 Pfam PF16220 Domain of unknown function (DUF4880) 57 96 2.1E-6 T 11-10-2018 IPR032623 FecR, N-terminal Patl_0786 4d938fa6bcb09a850faa4047239d69eb 383 Pfam PF04773 FecR protein 172 261 1.5E-19 T 11-10-2018 IPR006860 FecR protein Patl_3933 e27b696e523ac007dc7b1b699ccc1c5c 265 Gene3D G3DSA:3.20.20.60 1 264 5.4E-108 T 11-10-2018 Patl_3933 e27b696e523ac007dc7b1b699ccc1c5c 265 SUPERFAMILY SSF51621 3 263 4.13E-107 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Patl_3933 e27b696e523ac007dc7b1b699ccc1c5c 265 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 4 263 1.4E-114 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Patl_3933 e27b696e523ac007dc7b1b699ccc1c5c 265 PIRSF PIRSF000388 1 265 7.5E-101 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Patl_3933 e27b696e523ac007dc7b1b699ccc1c5c 265 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 42.312 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Patl_3933 e27b696e523ac007dc7b1b699ccc1c5c 265 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 259 1.3E-108 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Patl_0635 96aca2be978ccc837902df5717301da2 406 SUPERFAMILY SSF56645 1 264 2.23E-66 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_0635 96aca2be978ccc837902df5717301da2 406 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 251 399 1.1E-31 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_0635 96aca2be978ccc837902df5717301da2 406 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 134 1.6E-18 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Patl_0635 96aca2be978ccc837902df5717301da2 406 Gene3D G3DSA:1.10.540.10 1 136 2.7E-53 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Patl_0635 96aca2be978ccc837902df5717301da2 406 SUPERFAMILY SSF47203 250 405 4.35E-41 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_0635 96aca2be978ccc837902df5717301da2 406 Gene3D G3DSA:1.20.140.10 252 406 3.7E-35 T 11-10-2018 Patl_0635 96aca2be978ccc837902df5717301da2 406 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 139 239 1.9E-17 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Patl_0635 96aca2be978ccc837902df5717301da2 406 Gene3D G3DSA:2.40.110.10 137 251 5.1E-40 T 11-10-2018 Patl_2134 9c13496aac69a7c12ac7c5648689760e 1070 Pfam PF00575 S1 RNA binding domain 51 133 3.0E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 Patl_2134 9c13496aac69a7c12ac7c5648689760e 1070 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 28 439 2.0E-169 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Patl_2134 9c13496aac69a7c12ac7c5648689760e 1070 Gene3D G3DSA:2.40.50.140 47 140 3.3E-31 T 11-10-2018 Patl_2134 9c13496aac69a7c12ac7c5648689760e 1070 SMART SM00316 52 134 1.2E-9 T 11-10-2018 IPR022967 RNA-binding domain, S1 Patl_2134 9c13496aac69a7c12ac7c5648689760e 1070 Hamap MF_00970 Ribonuclease E [rne]. 16 1001 33.527 T 11-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 Patl_2134 9c13496aac69a7c12ac7c5648689760e 1070 Pfam PF10150 Ribonuclease E/G family 136 405 1.1E-95 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Patl_2134 9c13496aac69a7c12ac7c5648689760e 1070 Gene3D G3DSA:3.40.1260.20 415 523 3.3E-37 T 11-10-2018 Patl_2134 9c13496aac69a7c12ac7c5648689760e 1070 SUPERFAMILY SSF50249 55 139 6.33E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_2070 85ec17195a1554dd23d36d5f1cc16e8b 317 Gene3D G3DSA:1.10.760.10 125 313 2.5E-74 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_2070 85ec17195a1554dd23d36d5f1cc16e8b 317 SUPERFAMILY SSF46626 232 314 4.51E-23 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_2070 85ec17195a1554dd23d36d5f1cc16e8b 317 SUPERFAMILY SSF46626 55 232 1.89E-30 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_2070 85ec17195a1554dd23d36d5f1cc16e8b 317 PRINTS PR00605 Class IC cytochrome C signature 288 310 3.0E-6 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 Patl_2070 85ec17195a1554dd23d36d5f1cc16e8b 317 PRINTS PR00605 Class IC cytochrome C signature 159 170 3.0E-6 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 Patl_2070 85ec17195a1554dd23d36d5f1cc16e8b 317 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 149 222 3.4E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_2070 85ec17195a1554dd23d36d5f1cc16e8b 317 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 238 310 9.4E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_2070 85ec17195a1554dd23d36d5f1cc16e8b 317 Gene3D G3DSA:1.20.58.1490 1 93 9.1E-32 T 11-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily Patl_2070 85ec17195a1554dd23d36d5f1cc16e8b 317 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 114 315 7.4E-63 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Patl_2070 85ec17195a1554dd23d36d5f1cc16e8b 317 Gene3D G3DSA:1.10.760.10 204 290 2.5E-74 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_2070 85ec17195a1554dd23d36d5f1cc16e8b 317 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 82 1.2E-21 T 11-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal Patl_2070 85ec17195a1554dd23d36d5f1cc16e8b 317 PIRSF PIRSF000006 1 317 2.1E-102 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 SUPERFAMILY SSF55681 4 246 8.45E-111 T 11-10-2018 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 844 0.0 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 Gene3D G3DSA:2.40.30.130 452 542 1.6E-11 T 11-10-2018 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 SUPERFAMILY SSF50447 446 542 1.31E-15 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 643 686 1.0E-20 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 Gene3D G3DSA:3.30.930.10 2 243 9.2E-117 T 11-10-2018 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 227 240 8.9E-33 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 8.9E-33 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 273 289 8.9E-33 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 200 211 8.9E-33 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 297 310 8.9E-33 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 Gene3D G3DSA:3.10.310.40 754 862 2.1E-33 T 11-10-2018 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 SUPERFAMILY SSF55186 543 701 9.42E-52 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 Gene3D G3DSA:3.30.980.10 553 687 1.2E-52 T 11-10-2018 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 Pfam PF01411 tRNA synthetases class II (A) 7 543 7.1E-226 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 Pfam PF02272 DHHA1 domain 723 861 1.0E-28 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 SUPERFAMILY SSF101353 247 455 4.05E-64 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 865 199.542 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 Gene3D G3DSA:3.30.54.20 614 667 1.2E-52 T 11-10-2018 Patl_3015 6793a5fcb12a02b67172d3755a2cbc45 865 SMART SM00863 643 686 9.3E-24 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Patl_2377 c5aa1330b448d63b3511e7d00999894d 743 SUPERFAMILY SSF53659 5 741 0.0 T 11-10-2018 Patl_2377 c5aa1330b448d63b3511e7d00999894d 743 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 739 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Patl_2377 c5aa1330b448d63b3511e7d00999894d 743 Gene3D G3DSA:3.40.718.10 403 659 4.0E-8 T 11-10-2018 Patl_2377 c5aa1330b448d63b3511e7d00999894d 743 Gene3D G3DSA:3.40.718.10 151 344 1.1E-5 T 11-10-2018 Patl_2377 c5aa1330b448d63b3511e7d00999894d 743 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Patl_2377 c5aa1330b448d63b3511e7d00999894d 743 PIRSF PIRSF009407 1 743 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Patl_3248 1ad638e11788bbd8731e1d0f80912bb0 433 SMART SM00028 233 266 39.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3248 1ad638e11788bbd8731e1d0f80912bb0 433 SMART SM00028 162 195 1.2E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3248 1ad638e11788bbd8731e1d0f80912bb0 433 Gene3D G3DSA:1.25.40.10 150 285 7.9E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3248 1ad638e11788bbd8731e1d0f80912bb0 433 SUPERFAMILY SSF48452 159 268 5.93E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3248 1ad638e11788bbd8731e1d0f80912bb0 433 Pfam PF14559 Tetratricopeptide repeat 215 277 8.6E-6 T 11-10-2018 Patl_3248 1ad638e11788bbd8731e1d0f80912bb0 433 Pfam PF07719 Tetratricopeptide repeat 162 195 3.9E-5 T 11-10-2018 IPR013105 Tetratricopeptide repeat 2 Patl_3248 1ad638e11788bbd8731e1d0f80912bb0 433 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 4 108 1.1E-15 T 11-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI Patl_1859 886de2721adc284b7aedd7ed82358d54 329 Gene3D G3DSA:2.130.10.10 231 327 2.2E-20 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_1859 886de2721adc284b7aedd7ed82358d54 329 SUPERFAMILY SSF50974 8 325 5.36E-77 T 11-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 Patl_1859 886de2721adc284b7aedd7ed82358d54 329 Gene3D G3DSA:2.130.10.10 27 230 3.1E-55 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_1859 886de2721adc284b7aedd7ed82358d54 329 Pfam PF02239 Cytochrome D1 heme domain 76 177 1.1E-6 T 11-10-2018 Patl_1859 886de2721adc284b7aedd7ed82358d54 329 Pfam PF10282 Lactonase, 7-bladed beta-propeller 183 306 8.9E-5 T 11-10-2018 IPR019405 Lactonase, 7-bladed beta propeller Patl_1859 886de2721adc284b7aedd7ed82358d54 329 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 109 150 1.8E-9 T 11-10-2018 IPR011964 YVTN beta-propeller repeat Patl_1859 886de2721adc284b7aedd7ed82358d54 329 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 288 325 1.2E-11 T 11-10-2018 IPR011964 YVTN beta-propeller repeat Patl_1859 886de2721adc284b7aedd7ed82358d54 329 TIGRFAM TIGR03866 PQQ_ABC_repeats: PQQ-dependent catabolism-associated beta-propeller protein 20 326 1.2E-156 T 11-10-2018 IPR022456 PQQ-dependent catabolism-associated beta-propeller protein Patl_0804 3091dcf754d655fc30172f5447fb5617 858 Gene3D G3DSA:2.60.120.260 23 177 9.6E-45 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0804 3091dcf754d655fc30172f5447fb5617 858 Pfam PF00703 Glycosyl hydrolases family 2 191 301 4.3E-14 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0804 3091dcf754d655fc30172f5447fb5617 858 PRINTS PR00132 Glycosyl hydrolase family 2 signature 429 444 3.8E-12 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0804 3091dcf754d655fc30172f5447fb5617 858 PRINTS PR00132 Glycosyl hydrolase family 2 signature 313 327 3.8E-12 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0804 3091dcf754d655fc30172f5447fb5617 858 PRINTS PR00132 Glycosyl hydrolase family 2 signature 111 126 3.8E-12 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0804 3091dcf754d655fc30172f5447fb5617 858 PRINTS PR00132 Glycosyl hydrolase family 2 signature 344 362 3.8E-12 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_0804 3091dcf754d655fc30172f5447fb5617 858 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 30 177 4.5E-24 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_0804 3091dcf754d655fc30172f5447fb5617 858 SUPERFAMILY SSF49785 2 179 2.07E-37 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0804 3091dcf754d655fc30172f5447fb5617 858 SUPERFAMILY SSF51445 306 621 8.26E-60 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_0804 3091dcf754d655fc30172f5447fb5617 858 Gene3D G3DSA:2.60.40.10 748 857 1.4E-27 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0804 3091dcf754d655fc30172f5447fb5617 858 Gene3D G3DSA:2.60.40.10 178 301 1.0E-22 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0804 3091dcf754d655fc30172f5447fb5617 858 Pfam PF16355 Domain of unknown function (DUF4982) 681 739 3.4E-17 T 11-10-2018 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_0804 3091dcf754d655fc30172f5447fb5617 858 SUPERFAMILY SSF49373 747 801 3.4E-5 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Patl_0804 3091dcf754d655fc30172f5447fb5617 858 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 308 445 4.1E-23 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_0804 3091dcf754d655fc30172f5447fb5617 858 Gene3D G3DSA:2.60.40.10 669 746 7.6E-17 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0804 3091dcf754d655fc30172f5447fb5617 858 SUPERFAMILY SSF49303 188 301 1.9E-14 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Patl_1097 fc5907543e77bbf587fdd4e67c38207b 215 Gene3D G3DSA:3.40.50.300 5 213 5.7E-35 T 11-10-2018 Patl_1097 fc5907543e77bbf587fdd4e67c38207b 215 SUPERFAMILY SSF52540 7 206 3.08E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3322 830384ba07f252cd68b6ea305015b8cf 694 Gene3D G3DSA:3.30.1840.10 114 312 1.9E-67 T 11-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 Patl_3322 830384ba07f252cd68b6ea305015b8cf 694 Pfam PF02503 Polyphosphate kinase middle domain 123 325 4.4E-41 T 11-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 Patl_3322 830384ba07f252cd68b6ea305015b8cf 694 PIRSF PIRSF015589 1 694 1.6E-240 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Patl_3322 830384ba07f252cd68b6ea305015b8cf 694 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 8 682 1.2E-257 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Patl_3322 830384ba07f252cd68b6ea305015b8cf 694 SUPERFAMILY SSF56024 321 498 6.06E-51 T 11-10-2018 Patl_3322 830384ba07f252cd68b6ea305015b8cf 694 Hamap MF_00347 Polyphosphate kinase [ppk]. 5 686 26.515 T 11-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Patl_3322 830384ba07f252cd68b6ea305015b8cf 694 Pfam PF13089 Polyphosphate kinase N-terminal domain 8 113 2.5E-31 T 11-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 Patl_3322 830384ba07f252cd68b6ea305015b8cf 694 Gene3D G3DSA:3.30.870.10 323 504 8.8E-70 T 11-10-2018 Patl_3322 830384ba07f252cd68b6ea305015b8cf 694 SUPERFAMILY SSF140356 4 108 1.29E-30 T 11-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 Patl_3322 830384ba07f252cd68b6ea305015b8cf 694 Gene3D G3DSA:1.20.58.310 10 113 6.3E-32 T 11-10-2018 Patl_3322 830384ba07f252cd68b6ea305015b8cf 694 Gene3D G3DSA:3.30.870.10 505 691 1.1E-71 T 11-10-2018 Patl_3322 830384ba07f252cd68b6ea305015b8cf 694 SUPERFAMILY SSF143724 111 319 1.8E-57 T 11-10-2018 Patl_3322 830384ba07f252cd68b6ea305015b8cf 694 Pfam PF13090 Polyphosphate kinase C-terminal domain 335 681 3.7E-142 T 11-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 Patl_3322 830384ba07f252cd68b6ea305015b8cf 694 SUPERFAMILY SSF56024 505 688 8.97E-68 T 11-10-2018 Patl_3900 e26ceac9b78933352fa33c19913c5609 158 SUPERFAMILY SSF54427 23 149 5.49E-23 T 11-10-2018 IPR032710 NTF2-like domain superfamily Patl_3900 e26ceac9b78933352fa33c19913c5609 158 Gene3D G3DSA:3.10.450.50 17 158 1.3E-45 T 11-10-2018 Patl_3900 e26ceac9b78933352fa33c19913c5609 158 Pfam PF13474 SnoaL-like domain 27 150 5.8E-12 T 11-10-2018 IPR037401 SnoaL-like domain Patl_3156 b7233dabc833996f85f15f0d8d27e0e4 534 Gene3D G3DSA:1.20.58.100 422 533 7.7E-42 T 11-10-2018 Patl_3156 b7233dabc833996f85f15f0d8d27e0e4 534 SUPERFAMILY SSF51905 4 444 4.34E-72 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3156 b7233dabc833996f85f15f0d8d27e0e4 534 SUPERFAMILY SSF46977 425 520 2.35E-30 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_3156 b7233dabc833996f85f15f0d8d27e0e4 534 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 8 517 2.6E-205 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 Patl_3156 b7233dabc833996f85f15f0d8d27e0e4 534 Gene3D G3DSA:3.50.50.60 10 401 2.1E-154 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3156 b7233dabc833996f85f15f0d8d27e0e4 534 Gene3D G3DSA:3.90.700.10 245 355 2.1E-154 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_3156 b7233dabc833996f85f15f0d8d27e0e4 534 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 352 374 3.7E-8 T 11-10-2018 Patl_3156 b7233dabc833996f85f15f0d8d27e0e4 534 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 3.7E-8 T 11-10-2018 Patl_3156 b7233dabc833996f85f15f0d8d27e0e4 534 Pfam PF00890 FAD binding domain 10 389 2.2E-98 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_3156 b7233dabc833996f85f15f0d8d27e0e4 534 SUPERFAMILY SSF56425 235 349 1.64E-41 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_3156 b7233dabc833996f85f15f0d8d27e0e4 534 PIRSF PIRSF000171 1 247 1.9E-29 T 11-10-2018 Patl_3156 b7233dabc833996f85f15f0d8d27e0e4 534 PIRSF PIRSF000171 334 527 3.4E-11 T 11-10-2018 Patl_3156 b7233dabc833996f85f15f0d8d27e0e4 534 Pfam PF02910 Fumarate reductase flavoprotein C-term 438 517 2.2E-13 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_4096 3898feb2dcef19c0f583043223f0d46f 535 Pfam PF00145 C-5 cytosine-specific DNA methylase 248 526 6.1E-24 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Patl_4096 3898feb2dcef19c0f583043223f0d46f 535 Pfam PF00145 C-5 cytosine-specific DNA methylase 121 200 2.2E-14 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Patl_4096 3898feb2dcef19c0f583043223f0d46f 535 Gene3D G3DSA:3.90.120.10 411 521 6.1E-22 T 11-10-2018 Patl_4096 3898feb2dcef19c0f583043223f0d46f 535 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 170 184 3.1E-9 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Patl_4096 3898feb2dcef19c0f583043223f0d46f 535 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 6 22 3.1E-9 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Patl_4096 3898feb2dcef19c0f583043223f0d46f 535 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 121 526 7.4E-37 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 Patl_4096 3898feb2dcef19c0f583043223f0d46f 535 Gene3D G3DSA:3.40.50.150 5 308 8.8E-40 T 11-10-2018 Patl_4096 3898feb2dcef19c0f583043223f0d46f 535 SUPERFAMILY SSF53335 3 528 1.27E-60 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3651 975bfe817cf49a61935efa3279630e45 748 Gene3D G3DSA:2.70.98.70 390 745 2.6E-98 T 11-10-2018 Patl_3651 975bfe817cf49a61935efa3279630e45 748 Pfam PF05426 Alginate lyase 95 322 2.4E-17 T 11-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 Patl_3651 975bfe817cf49a61935efa3279630e45 748 Gene3D G3DSA:1.50.10.100 27 387 2.3E-115 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Patl_3651 975bfe817cf49a61935efa3279630e45 748 SUPERFAMILY SSF48230 68 352 2.93E-47 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 Patl_3651 975bfe817cf49a61935efa3279630e45 748 Pfam PF07940 Heparinase II/III-like protein 395 652 6.8E-30 T 11-10-2018 IPR012480 Heparinase II/III-like GO:0016829 Patl_3268 f797e68f5a87c84c3cd0750e20731516 519 Gene3D G3DSA:3.30.160.270 393 501 4.5E-11 T 11-10-2018 Patl_3268 f797e68f5a87c84c3cd0750e20731516 519 Pfam PF00682 HMGL-like 4 273 2.5E-98 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Patl_3268 f797e68f5a87c84c3cd0750e20731516 519 Gene3D G3DSA:1.10.238.260 280 392 5.0E-33 T 11-10-2018 Patl_3268 f797e68f5a87c84c3cd0750e20731516 519 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 510 42.653 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Patl_3268 f797e68f5a87c84c3cd0750e20731516 519 Gene3D G3DSA:3.20.20.70 2 276 5.1E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_3268 f797e68f5a87c84c3cd0750e20731516 519 SMART SM00917 369 501 7.7E-38 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Patl_3268 f797e68f5a87c84c3cd0750e20731516 519 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Patl_3268 f797e68f5a87c84c3cd0750e20731516 519 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Patl_3268 f797e68f5a87c84c3cd0750e20731516 519 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 4.3E-34 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Patl_3268 f797e68f5a87c84c3cd0750e20731516 519 SUPERFAMILY SSF110921 390 499 4.58E-25 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Patl_3268 f797e68f5a87c84c3cd0750e20731516 519 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 498 7.0E-235 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Patl_3268 f797e68f5a87c84c3cd0750e20731516 519 SUPERFAMILY SSF51569 1 291 3.3E-98 T 11-10-2018 Patl_3820 82b72aa10cebf6da68c1fb28d252c634 645 Gene3D G3DSA:2.60.40.1180 566 640 1.4E-15 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_3820 82b72aa10cebf6da68c1fb28d252c634 645 SMART SM00642 101 528 6.6E-31 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_3820 82b72aa10cebf6da68c1fb28d252c634 645 Gene3D G3DSA:1.10.1740.10 6 96 3.7E-17 T 11-10-2018 Patl_3820 82b72aa10cebf6da68c1fb28d252c634 645 Gene3D G3DSA:3.90.400.10 186 261 5.2E-201 T 11-10-2018 Patl_3820 82b72aa10cebf6da68c1fb28d252c634 645 SUPERFAMILY SSF51445 19 560 5.28E-117 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_3820 82b72aa10cebf6da68c1fb28d252c634 645 Pfam PF00128 Alpha amylase, catalytic domain 109 345 7.4E-38 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_3820 82b72aa10cebf6da68c1fb28d252c634 645 Gene3D G3DSA:3.20.20.80 99 555 5.2E-201 T 11-10-2018 Patl_3820 82b72aa10cebf6da68c1fb28d252c634 645 Pfam PF11941 Domain of unknown function (DUF3459) 547 639 1.0E-6 T 11-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) Patl_3820 82b72aa10cebf6da68c1fb28d252c634 645 SUPERFAMILY SSF51011 567 639 1.05E-9 T 11-10-2018 Patl_2964 6c425f0c608559023b979816e6466c95 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 419 6.2E-62 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Patl_2964 6c425f0c608559023b979816e6466c95 453 Pfam PF01554 MatE 28 188 2.0E-28 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Patl_2964 6c425f0c608559023b979816e6466c95 453 Pfam PF01554 MatE 253 414 4.0E-22 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Patl_2964 6c425f0c608559023b979816e6466c95 453 PIRSF PIRSF006603 2 453 1.3E-117 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Patl_4013 061ca78f448d624aa528d2d550220d90 218 SMART SM00947 27 193 1.1E-65 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Patl_4013 061ca78f448d624aa528d2d550220d90 218 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Patl_4013 061ca78f448d624aa528d2d550220d90 218 SUPERFAMILY SSF53056 1 208 2.75E-64 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Patl_4013 061ca78f448d624aa528d2d550220d90 218 Pfam PF00484 Carbonic anhydrase 35 189 2.8E-50 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Patl_4013 061ca78f448d624aa528d2d550220d90 218 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Patl_4013 061ca78f448d624aa528d2d550220d90 218 Gene3D G3DSA:3.40.1050.10 1 202 5.9E-72 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Patl_1882 15d7a2f23139b0cf0410cf5577acb1c3 343 SUPERFAMILY SSF53686 35 340 3.93E-93 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Patl_1882 15d7a2f23139b0cf0410cf5577acb1c3 343 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 40 328 8.0E-69 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Patl_1882 15d7a2f23139b0cf0410cf5577acb1c3 343 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 68 86 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Patl_1882 15d7a2f23139b0cf0410cf5577acb1c3 343 TIGRFAM TIGR01139 cysK: cysteine synthase A 40 340 5.8E-115 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Patl_1882 15d7a2f23139b0cf0410cf5577acb1c3 343 Gene3D G3DSA:3.40.50.1100 42 335 1.9E-109 T 11-10-2018 Patl_1882 15d7a2f23139b0cf0410cf5577acb1c3 343 TIGRFAM TIGR01136 cysKM: cysteine synthase 40 340 7.2E-116 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Patl_1882 15d7a2f23139b0cf0410cf5577acb1c3 343 Gene3D G3DSA:3.40.50.1100 80 181 1.9E-109 T 11-10-2018 Patl_0995 62d6c59b698e6d1a482a52100e36035e 246 Gene3D G3DSA:3.30.1330.30 1 78 2.3E-25 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Patl_0995 62d6c59b698e6d1a482a52100e36035e 246 Pfam PF00588 SpoU rRNA Methylase family 98 238 1.0E-40 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Patl_0995 62d6c59b698e6d1a482a52100e36035e 246 SUPERFAMILY SSF75217 71 245 1.9E-49 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Patl_0995 62d6c59b698e6d1a482a52100e36035e 246 Gene3D G3DSA:3.40.1280.10 79 245 4.9E-64 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Patl_0995 62d6c59b698e6d1a482a52100e36035e 246 SUPERFAMILY SSF55315 2 78 8.0E-19 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like Patl_0995 62d6c59b698e6d1a482a52100e36035e 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 78 2.8E-16 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Patl_0995 62d6c59b698e6d1a482a52100e36035e 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 244 5.3E-86 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Patl_0995 62d6c59b698e6d1a482a52100e36035e 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 245 42.731 T 11-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB Patl_0995 62d6c59b698e6d1a482a52100e36035e 246 SMART SM00967 6 82 7.8E-20 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Patl_1801 8c751ba2987f99007e27fa4108b0f531 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Patl_1801 8c751ba2987f99007e27fa4108b0f531 389 SUPERFAMILY SSF56059 1 238 1.0E-81 T 11-10-2018 Patl_1801 8c751ba2987f99007e27fa4108b0f531 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 3.4E-173 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Patl_1801 8c751ba2987f99007e27fa4108b0f531 389 Gene3D G3DSA:3.40.50.261 240 388 4.2E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Patl_1801 8c751ba2987f99007e27fa4108b0f531 389 Pfam PF08442 ATP-grasp domain 2 203 1.1E-82 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Patl_1801 8c751ba2987f99007e27fa4108b0f531 389 Gene3D G3DSA:3.30.470.20 1 234 3.7E-94 T 11-10-2018 Patl_1801 8c751ba2987f99007e27fa4108b0f531 389 SUPERFAMILY SSF52210 240 384 3.53E-52 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Patl_1801 8c751ba2987f99007e27fa4108b0f531 389 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.179 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Patl_1801 8c751ba2987f99007e27fa4108b0f531 389 Pfam PF00549 CoA-ligase 262 382 2.8E-24 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Patl_1801 8c751ba2987f99007e27fa4108b0f531 389 PIRSF PIRSF001554 1 388 3.9E-154 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Patl_1801 8c751ba2987f99007e27fa4108b0f531 389 Gene3D G3DSA:3.30.1490.20 21 104 3.7E-94 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Patl_3183 e7a9bcc6070bc4608bdb83617d4153a5 148 Pfam PF00258 Flavodoxin 6 133 1.9E-21 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Patl_3183 e7a9bcc6070bc4608bdb83617d4153a5 148 SUPERFAMILY SSF52218 1 147 1.24E-36 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_3183 e7a9bcc6070bc4608bdb83617d4153a5 148 Gene3D G3DSA:3.40.50.360 1 146 9.0E-37 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_2338 0c707f42ebe599a8b3b7518501aed161 839 Gene3D G3DSA:3.20.20.80 255 636 5.8E-147 T 11-10-2018 Patl_2338 0c707f42ebe599a8b3b7518501aed161 839 Pfam PF13802 Galactose mutarotase-like 167 229 2.7E-11 T 11-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain Patl_2338 0c707f42ebe599a8b3b7518501aed161 839 Pfam PF17137 Domain of unknown function (DUF5110) 706 785 6.3E-9 T 11-10-2018 IPR033403 Domain of unknown function DUF5110 Patl_2338 0c707f42ebe599a8b3b7518501aed161 839 Pfam PF16338 Domain of unknown function (DUF4968) 58 146 8.1E-12 T 11-10-2018 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 Patl_2338 0c707f42ebe599a8b3b7518501aed161 839 Gene3D G3DSA:2.60.40.1180 637 686 4.0E-15 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_2338 0c707f42ebe599a8b3b7518501aed161 839 Gene3D G3DSA:2.60.40.1760 49 250 2.3E-53 T 11-10-2018 Patl_2338 0c707f42ebe599a8b3b7518501aed161 839 Pfam PF01055 Glycosyl hydrolases family 31 251 690 3.5E-120 T 11-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 Patl_2338 0c707f42ebe599a8b3b7518501aed161 839 SUPERFAMILY SSF51011 606 686 4.39E-21 T 11-10-2018 Patl_2338 0c707f42ebe599a8b3b7518501aed161 839 Gene3D G3DSA:2.60.40.1180 687 838 4.6E-29 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_2338 0c707f42ebe599a8b3b7518501aed161 839 SUPERFAMILY SSF51445 260 605 2.3E-70 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_2338 0c707f42ebe599a8b3b7518501aed161 839 SUPERFAMILY SSF74650 52 256 6.59E-37 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Patl_3748 b01e63a3d6f6263c47127dd7e78cac80 1488 Pfam PF01645 Conserved region in glutamate synthase 794 1157 6.4E-153 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Patl_3748 b01e63a3d6f6263c47127dd7e78cac80 1488 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_3748 b01e63a3d6f6263c47127dd7e78cac80 1488 Gene3D G3DSA:2.160.20.60 1198 1470 1.9E-94 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Patl_3748 b01e63a3d6f6263c47127dd7e78cac80 1488 SUPERFAMILY SSF69336 1215 1466 5.1E-82 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Patl_3748 b01e63a3d6f6263c47127dd7e78cac80 1488 Gene3D G3DSA:3.20.20.70 484 1171 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_3748 b01e63a3d6f6263c47127dd7e78cac80 1488 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_3748 b01e63a3d6f6263c47127dd7e78cac80 1488 SUPERFAMILY SSF56235 13 430 1.68E-145 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_3748 b01e63a3d6f6263c47127dd7e78cac80 1488 Pfam PF01493 GXGXG motif 1237 1422 3.4E-72 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Patl_3748 b01e63a3d6f6263c47127dd7e78cac80 1488 Pfam PF00310 Glutamine amidotransferases class-II 13 426 2.0E-172 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Patl_3748 b01e63a3d6f6263c47127dd7e78cac80 1488 SUPERFAMILY SSF51395 436 1194 1.99E-250 T 11-10-2018 Patl_3748 b01e63a3d6f6263c47127dd7e78cac80 1488 Pfam PF04898 Glutamate synthase central domain 459 738 2.7E-103 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 Patl_3329 3258ed16f35cfaf5f4a90228fe26cabe 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 8.0E-30 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3329 3258ed16f35cfaf5f4a90228fe26cabe 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 8.0E-30 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3329 3258ed16f35cfaf5f4a90228fe26cabe 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 8.0E-30 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3329 3258ed16f35cfaf5f4a90228fe26cabe 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 8.0E-30 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3329 3258ed16f35cfaf5f4a90228fe26cabe 342 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 8.0E-30 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3329 3258ed16f35cfaf5f4a90228fe26cabe 342 Gene3D G3DSA:3.30.360.10 153 317 1.1E-129 T 11-10-2018 Patl_3329 3258ed16f35cfaf5f4a90228fe26cabe 342 Gene3D G3DSA:3.40.50.720 3 327 1.1E-129 T 11-10-2018 Patl_3329 3258ed16f35cfaf5f4a90228fe26cabe 342 SUPERFAMILY SSF55347 154 316 1.49E-59 T 11-10-2018 Patl_3329 3258ed16f35cfaf5f4a90228fe26cabe 342 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 104 2.2E-34 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3329 3258ed16f35cfaf5f4a90228fe26cabe 342 PIRSF PIRSF000149 1 336 1.9E-127 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3329 3258ed16f35cfaf5f4a90228fe26cabe 342 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 315 8.8E-56 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3329 3258ed16f35cfaf5f4a90228fe26cabe 342 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 336 66.021 T 11-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 Patl_3329 3258ed16f35cfaf5f4a90228fe26cabe 342 SMART SM00846 2 154 2.0E-70 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3329 3258ed16f35cfaf5f4a90228fe26cabe 342 SUPERFAMILY SSF51735 2 178 6.51E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3329 3258ed16f35cfaf5f4a90228fe26cabe 342 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 327 7.9E-161 T 11-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 Patl_2691 44577807cafc0f82596b63a0f0f1b959 335 Gene3D G3DSA:3.40.50.2300 65 307 4.0E-78 T 11-10-2018 Patl_2691 44577807cafc0f82596b63a0f0f1b959 335 Gene3D G3DSA:1.10.260.40 1 59 9.1E-20 T 11-10-2018 Patl_2691 44577807cafc0f82596b63a0f0f1b959 335 SUPERFAMILY SSF53822 64 333 5.72E-79 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Patl_2691 44577807cafc0f82596b63a0f0f1b959 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 3.9E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_2691 44577807cafc0f82596b63a0f0f1b959 335 SMART SM00354 1 71 2.6E-23 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_2691 44577807cafc0f82596b63a0f0f1b959 335 SUPERFAMILY SSF47413 2 59 1.13E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_2691 44577807cafc0f82596b63a0f0f1b959 335 Pfam PF13377 Periplasmic binding protein-like domain 170 329 7.0E-43 T 11-10-2018 Patl_2691 44577807cafc0f82596b63a0f0f1b959 335 Gene3D G3DSA:3.40.50.2300 160 289 4.0E-78 T 11-10-2018 Patl_3601 2c265bf774c78307115a9b99bdfa68af 966 Pfam PF08335 GlnD PII-uridylyltransferase 305 442 4.5E-40 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Patl_3601 2c265bf774c78307115a9b99bdfa68af 966 Pfam PF08335 GlnD PII-uridylyltransferase 846 938 4.0E-10 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 Patl_3601 2c265bf774c78307115a9b99bdfa68af 966 SUPERFAMILY SSF81593 295 440 8.63E-37 T 11-10-2018 Patl_3601 2c265bf774c78307115a9b99bdfa68af 966 Gene3D G3DSA:3.30.460.100 575 830 1.4E-84 T 11-10-2018 Patl_3601 2c265bf774c78307115a9b99bdfa68af 966 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 565 822 1.8E-83 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Patl_3601 2c265bf774c78307115a9b99bdfa68af 966 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 40 277 1.3E-80 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 Patl_3601 2c265bf774c78307115a9b99bdfa68af 966 SUPERFAMILY SSF81301 38 294 6.54E-79 T 11-10-2018 Patl_3601 2c265bf774c78307115a9b99bdfa68af 966 Gene3D G3DSA:1.20.120.1510 460 574 1.2E-23 T 11-10-2018 Patl_3601 2c265bf774c78307115a9b99bdfa68af 966 Gene3D G3DSA:1.20.120.330 293 448 3.7E-48 T 11-10-2018 Patl_3601 2c265bf774c78307115a9b99bdfa68af 966 SUPERFAMILY SSF81301 538 832 3.02E-80 T 11-10-2018 Patl_3601 2c265bf774c78307115a9b99bdfa68af 966 Gene3D G3DSA:3.30.460.10 121 292 7.7E-58 T 11-10-2018 Patl_3601 2c265bf774c78307115a9b99bdfa68af 966 SUPERFAMILY SSF81593 834 962 5.02E-30 T 11-10-2018 Patl_3601 2c265bf774c78307115a9b99bdfa68af 966 Gene3D G3DSA:1.20.120.330 831 965 8.4E-42 T 11-10-2018 Patl_3601 2c265bf774c78307115a9b99bdfa68af 966 Gene3D G3DSA:1.10.4050.10 12 119 7.1E-16 T 11-10-2018 Patl_3601 2c265bf774c78307115a9b99bdfa68af 966 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 37 964 18.355 T 11-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 Patl_0243 fd6a23b3fd86d029f249946a2dacac3b 448 Pfam PF01225 Mur ligase family, catalytic domain 2 97 1.3E-15 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Patl_0243 fd6a23b3fd86d029f249946a2dacac3b 448 Pfam PF08245 Mur ligase middle domain 108 289 1.2E-23 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Patl_0243 fd6a23b3fd86d029f249946a2dacac3b 448 Gene3D G3DSA:3.40.1190.10 91 311 3.1E-57 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Patl_0243 fd6a23b3fd86d029f249946a2dacac3b 448 SUPERFAMILY SSF53623 94 306 6.02E-52 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Patl_0243 fd6a23b3fd86d029f249946a2dacac3b 448 SUPERFAMILY SSF53244 309 445 7.72E-40 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Patl_0243 fd6a23b3fd86d029f249946a2dacac3b 448 Gene3D G3DSA:3.40.50.720 1 90 2.8E-34 T 11-10-2018 Patl_0243 fd6a23b3fd86d029f249946a2dacac3b 448 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 359 1.9E-10 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Patl_0243 fd6a23b3fd86d029f249946a2dacac3b 448 SUPERFAMILY SSF51984 1 90 3.92E-22 T 11-10-2018 Patl_0243 fd6a23b3fd86d029f249946a2dacac3b 448 Gene3D G3DSA:3.90.190.20 312 448 6.7E-31 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Patl_0243 fd6a23b3fd86d029f249946a2dacac3b 448 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 447 58.326 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 Patl_0243 fd6a23b3fd86d029f249946a2dacac3b 448 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 446 2.7E-226 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 Patl_0130 3f3b394049a95dbfece370a636399d1b 747 SUPERFAMILY SSF48208 287 734 1.28E-31 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Patl_0130 3f3b394049a95dbfece370a636399d1b 747 Gene3D G3DSA:1.20.1610.10 463 623 7.1E-252 T 11-10-2018 Patl_0130 3f3b394049a95dbfece370a636399d1b 747 Gene3D G3DSA:2.70.98.10 49 374 7.1E-252 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Patl_0130 3f3b394049a95dbfece370a636399d1b 747 Gene3D G3DSA:1.20.1050.60 375 462 7.1E-252 T 11-10-2018 Patl_0130 3f3b394049a95dbfece370a636399d1b 747 Gene3D G3DSA:3.30.2080.10 322 746 7.1E-252 T 11-10-2018 Patl_0130 3f3b394049a95dbfece370a636399d1b 747 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 44 745 1.4E-201 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative Patl_0130 3f3b394049a95dbfece370a636399d1b 747 Pfam PF07971 Glycosyl hydrolase family 92 269 746 1.1E-173 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 Patl_0173 d6acc0998be2149ab0888b1535e6b539 637 Pfam PF00437 Type II/IV secretion system protein 188 452 3.8E-79 T 11-10-2018 IPR001482 Type II/IV secretion system protein Patl_0173 d6acc0998be2149ab0888b1535e6b539 637 Gene3D G3DSA:3.40.50.300 286 566 6.2E-104 T 11-10-2018 Patl_0173 d6acc0998be2149ab0888b1535e6b539 637 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 380 394 - T 11-10-2018 IPR001482 Type II/IV secretion system protein Patl_0173 d6acc0998be2149ab0888b1535e6b539 637 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 147 4.8E-24 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal Patl_0173 d6acc0998be2149ab0888b1535e6b539 637 SUPERFAMILY SSF52540 173 559 2.52E-95 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0173 d6acc0998be2149ab0888b1535e6b539 637 Gene3D G3DSA:3.30.300.160 63 144 2.9E-5 T 11-10-2018 Patl_0173 d6acc0998be2149ab0888b1535e6b539 637 Gene3D G3DSA:3.30.450.90 146 285 3.9E-44 T 11-10-2018 Patl_0173 d6acc0998be2149ab0888b1535e6b539 637 SUPERFAMILY SSF160246 4 144 2.88E-38 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Patl_0505 3c89d4c5032a1eb9f7730b3289dcb80b 891 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 207 411 3.2E-33 T 11-10-2018 Patl_0505 3c89d4c5032a1eb9f7730b3289dcb80b 891 Gene3D G3DSA:3.40.390.10 207 431 2.6E-19 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Patl_0505 3c89d4c5032a1eb9f7730b3289dcb80b 891 SUPERFAMILY SSF55486 210 421 7.83E-23 T 11-10-2018 Patl_2703 9ef8fe93131221396355aae25df5ef06 339 SUPERFAMILY SSF55073 184 337 4.87E-47 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_2703 9ef8fe93131221396355aae25df5ef06 339 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 337 1.0E-51 T 11-10-2018 IPR000160 GGDEF domain Patl_2703 9ef8fe93131221396355aae25df5ef06 339 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 335 4.0E-48 T 11-10-2018 IPR000160 GGDEF domain Patl_2703 9ef8fe93131221396355aae25df5ef06 339 Gene3D G3DSA:3.30.70.270 172 339 4.5E-56 T 11-10-2018 Patl_2703 9ef8fe93131221396355aae25df5ef06 339 SMART SM00267 168 339 4.2E-63 T 11-10-2018 IPR000160 GGDEF domain Patl_2271 0869b6fe8cad4e1f782036fa0ed4dc9f 170 Pfam PF04239 Protein of unknown function (DUF421) 94 157 8.3E-8 T 11-10-2018 IPR007353 Protein of unknown function DUF421 Patl_2271 0869b6fe8cad4e1f782036fa0ed4dc9f 170 Gene3D G3DSA:3.30.240.20 86 167 1.4E-13 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 30 370 3.2E-25 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 299 317 2.3E-27 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 2.3E-27 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 2.3E-27 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 2.3E-27 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 281 9.2E-73 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 SUPERFAMILY SSF50621 258 413 5.65E-52 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 Gene3D G3DSA:2.40.37.10 14 409 2.7E-147 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 SUPERFAMILY SSF51419 26 283 1.05E-80 T 11-10-2018 IPR029066 PLP-binding barrel Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 225 241 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 271 290 1.5E-26 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 1.5E-26 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 1.5E-26 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 1.5E-26 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 1.5E-26 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 8 412 1.6E-160 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 Gene3D G3DSA:3.20.20.10 34 276 2.7E-147 T 11-10-2018 IPR029066 PLP-binding barrel Patl_4073 b44e978dc9ec75cf4932cc85cec5fbc3 415 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 413 40.604 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 Gene3D G3DSA:1.10.1440.20 562 619 4.9E-9 T 11-10-2018 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 Pfam PF00330 Aconitase family (aconitate hydratase) 70 533 2.1E-144 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 SUPERFAMILY SSF52016 599 862 2.94E-65 T 11-10-2018 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 Pfam PF00694 Aconitase C-terminal domain 657 792 7.8E-30 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 Gene3D G3DSA:3.30.499.10 361 561 4.1E-77 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 Gene3D G3DSA:3.30.499.20 7 359 2.4E-130 T 11-10-2018 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 Gene3D G3DSA:3.20.19.10 620 863 9.0E-83 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 SUPERFAMILY SSF53732 15 587 3.53E-184 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 PRINTS PR00415 Aconitase family signature 162 170 1.3E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 PRINTS PR00415 Aconitase family signature 281 294 1.3E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 PRINTS PR00415 Aconitase family signature 360 374 1.3E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 PRINTS PR00415 Aconitase family signature 191 204 1.3E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 PRINTS PR00415 Aconitase family signature 464 477 1.3E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 PRINTS PR00415 Aconitase family signature 402 413 1.3E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 PRINTS PR00415 Aconitase family signature 138 151 1.3E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 PRINTS PR00415 Aconitase family signature 267 280 1.3E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 PRINTS PR00415 Aconitase family signature 205 220 1.3E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_1421 1c05c1cd798f331a90e1ecc203e40f57 868 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 864 0.0 T 11-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 Patl_0183 1c23f5903474ecdc8b42ebe3d6000717 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 1.1E-165 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Patl_0183 1c23f5903474ecdc8b42ebe3d6000717 347 SUPERFAMILY SSF53067 153 339 5.1E-49 T 11-10-2018 Patl_0183 1c23f5903474ecdc8b42ebe3d6000717 347 Gene3D G3DSA:3.30.420.40 14 331 3.3E-129 T 11-10-2018 Patl_0183 1c23f5903474ecdc8b42ebe3d6000717 347 Gene3D G3DSA:3.30.420.40 158 321 3.3E-129 T 11-10-2018 Patl_0183 1c23f5903474ecdc8b42ebe3d6000717 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 7.4E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Patl_0183 1c23f5903474ecdc8b42ebe3d6000717 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 7.4E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Patl_0183 1c23f5903474ecdc8b42ebe3d6000717 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 7.4E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Patl_0183 1c23f5903474ecdc8b42ebe3d6000717 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 7.4E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Patl_0183 1c23f5903474ecdc8b42ebe3d6000717 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 7.4E-65 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Patl_0183 1c23f5903474ecdc8b42ebe3d6000717 347 Gene3D G3DSA:3.90.640.10 190 263 3.3E-129 T 11-10-2018 Patl_0183 1c23f5903474ecdc8b42ebe3d6000717 347 SUPERFAMILY SSF53067 9 152 2.78E-37 T 11-10-2018 Patl_0183 1c23f5903474ecdc8b42ebe3d6000717 347 Pfam PF06723 MreB/Mbl protein 11 337 4.4E-148 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Patl_1584 4d9bad92ac7421dffe2d7b110bb59a2a 196 Pfam PF12464 Maltose acetyltransferase 9 58 9.9E-11 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 Patl_1584 4d9bad92ac7421dffe2d7b110bb59a2a 196 Gene3D G3DSA:2.160.10.10 2 187 1.3E-64 T 11-10-2018 Patl_1584 4d9bad92ac7421dffe2d7b110bb59a2a 196 SUPERFAMILY SSF51161 5 186 6.65E-48 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Patl_1584 4d9bad92ac7421dffe2d7b110bb59a2a 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 6.6E-11 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_1584 4d9bad92ac7421dffe2d7b110bb59a2a 196 SMART SM01266 7 61 4.5E-14 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 Patl_1584 4d9bad92ac7421dffe2d7b110bb59a2a 196 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 140 168 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Patl_0228 a05c98bf0a2ac0eda5f65ee9fc5cbc46 138 SUPERFAMILY SSF55174 16 112 1.06E-26 T 11-10-2018 Patl_0228 a05c98bf0a2ac0eda5f65ee9fc5cbc46 138 SMART SM00363 17 80 2.6E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0228 a05c98bf0a2ac0eda5f65ee9fc5cbc46 138 PIRSF PIRSF016821 14 138 5.9E-37 T 11-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 Patl_0228 a05c98bf0a2ac0eda5f65ee9fc5cbc46 138 Pfam PF01479 S4 domain 17 59 5.7E-12 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0228 a05c98bf0a2ac0eda5f65ee9fc5cbc46 138 Gene3D G3DSA:3.10.290.10 10 116 3.6E-34 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Patl_0046 23455d634ffeaa47cd7f5e76080605c8 224 Gene3D G3DSA:1.10.150.20 29 87 1.0E-6 T 11-10-2018 Patl_0046 23455d634ffeaa47cd7f5e76080605c8 224 Pfam PF04002 RadC-like JAB domain 103 223 7.9E-40 T 11-10-2018 IPR025657 RadC-like JAB domain Patl_0046 23455d634ffeaa47cd7f5e76080605c8 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site Patl_0046 23455d634ffeaa47cd7f5e76080605c8 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 9.7E-74 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 Patl_0046 23455d634ffeaa47cd7f5e76080605c8 224 SUPERFAMILY SSF47781 18 88 3.81E-12 T 11-10-2018 IPR010994 RuvA domain 2-like Patl_0046 23455d634ffeaa47cd7f5e76080605c8 224 Gene3D G3DSA:3.40.140.10 100 224 2.1E-39 T 11-10-2018 Patl_0046 23455d634ffeaa47cd7f5e76080605c8 224 SUPERFAMILY SSF102712 107 191 2.62E-6 T 11-10-2018 Patl_0530 db9bb83b8879d9039997c56238f0136c 392 SUPERFAMILY SSF48452 205 371 1.26E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0530 db9bb83b8879d9039997c56238f0136c 392 Gene3D G3DSA:1.25.40.10 199 389 8.1E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0530 db9bb83b8879d9039997c56238f0136c 392 Pfam PF13432 Tetratricopeptide repeat 212 272 0.0014 T 11-10-2018 Patl_0530 db9bb83b8879d9039997c56238f0136c 392 Pfam PF13414 TPR repeat 314 355 2.7E-8 T 11-10-2018 Patl_0530 db9bb83b8879d9039997c56238f0136c 392 SMART SM00028 341 374 45.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0530 db9bb83b8879d9039997c56238f0136c 392 SMART SM00028 239 272 1.9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0530 db9bb83b8879d9039997c56238f0136c 392 SMART SM00028 205 238 0.077 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0530 db9bb83b8879d9039997c56238f0136c 392 SMART SM00028 307 340 3.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0042 f8661ddb3cde0927c50bf28836e76e5c 552 SUPERFAMILY SSF52025 111 218 1.24E-11 T 11-10-2018 Patl_0042 f8661ddb3cde0927c50bf28836e76e5c 552 Gene3D G3DSA:3.40.630.10 29 105 2.2E-5 T 11-10-2018 Patl_0042 f8661ddb3cde0927c50bf28836e76e5c 552 Pfam PF02225 PA domain 138 212 8.1E-6 T 11-10-2018 IPR003137 PA domain Patl_0042 f8661ddb3cde0927c50bf28836e76e5c 552 Gene3D G3DSA:3.50.30.30 120 271 3.3E-5 T 11-10-2018 Patl_0042 f8661ddb3cde0927c50bf28836e76e5c 552 SUPERFAMILY SSF53187 39 533 3.82E-64 T 11-10-2018 Patl_0042 f8661ddb3cde0927c50bf28836e76e5c 552 Gene3D G3DSA:3.40.630.10 272 539 6.1E-47 T 11-10-2018 Patl_0042 f8661ddb3cde0927c50bf28836e76e5c 552 Pfam PF04389 Peptidase family M28 306 524 2.9E-42 T 11-10-2018 IPR007484 Peptidase M28 Patl_2665 e1273df44d4440c07f9eaa89081ea72c 681 Gene3D G3DSA:3.30.70.270 244 426 1.2E-42 T 11-10-2018 Patl_2665 e1273df44d4440c07f9eaa89081ea72c 681 Pfam PF00990 Diguanylate cyclase, GGDEF domain 251 409 2.3E-34 T 11-10-2018 IPR000160 GGDEF domain Patl_2665 e1273df44d4440c07f9eaa89081ea72c 681 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 414 8.6E-33 T 11-10-2018 IPR000160 GGDEF domain Patl_2665 e1273df44d4440c07f9eaa89081ea72c 681 Gene3D G3DSA:3.20.20.450 427 679 3.6E-71 T 11-10-2018 IPR035919 EAL domain superfamily Patl_2665 e1273df44d4440c07f9eaa89081ea72c 681 SUPERFAMILY SSF141868 430 679 5.89E-69 T 11-10-2018 IPR035919 EAL domain superfamily Patl_2665 e1273df44d4440c07f9eaa89081ea72c 681 SUPERFAMILY SSF55073 255 416 9.42E-37 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_2665 e1273df44d4440c07f9eaa89081ea72c 681 SMART SM00267 239 414 7.2E-39 T 11-10-2018 IPR000160 GGDEF domain Patl_2665 e1273df44d4440c07f9eaa89081ea72c 681 SMART SM00052 424 672 3.5E-68 T 11-10-2018 IPR001633 EAL domain Patl_2665 e1273df44d4440c07f9eaa89081ea72c 681 Pfam PF00563 EAL domain 430 667 4.9E-56 T 11-10-2018 IPR001633 EAL domain Patl_1552 47a4112ac56738a0302e754e10163c62 243 SUPERFAMILY SSF50891 1 199 3.21E-30 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Patl_1552 47a4112ac56738a0302e754e10163c62 243 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 181 2.9E-32 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_1552 47a4112ac56738a0302e754e10163c62 243 Gene3D G3DSA:2.40.100.10 1 182 3.3E-32 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Patl_0347 6f735c4d04100baaa61a371ebb301ccb 215 Pfam PF00625 Guanylate kinase 7 191 1.0E-57 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Patl_0347 6f735c4d04100baaa61a371ebb301ccb 215 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 191 2.1E-73 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Patl_0347 6f735c4d04100baaa61a371ebb301ccb 215 SUPERFAMILY SSF52540 5 195 1.16E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0347 6f735c4d04100baaa61a371ebb301ccb 215 Hamap MF_00328 Guanylate kinase [gmk]. 4 194 37.395 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Patl_0347 6f735c4d04100baaa61a371ebb301ccb 215 Gene3D G3DSA:3.30.63.10 44 103 1.4E-70 T 11-10-2018 Patl_0347 6f735c4d04100baaa61a371ebb301ccb 215 SMART SM00072 5 194 5.9E-63 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Patl_0347 6f735c4d04100baaa61a371ebb301ccb 215 ProSitePatterns PS00856 Guanylate kinase-like signature. 47 64 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 Patl_0347 6f735c4d04100baaa61a371ebb301ccb 215 Gene3D G3DSA:3.40.50.300 10 190 1.4E-70 T 11-10-2018 Patl_0580 085c33e86cb6b44f3e0c9a8d602994bc 187 Gene3D G3DSA:2.40.128.20 25 187 4.9E-52 T 11-10-2018 IPR012674 Calycin Patl_0580 085c33e86cb6b44f3e0c9a8d602994bc 187 PIRSF PIRSF036893 17 187 5.5E-44 T 11-10-2018 IPR022271 Lipocalin, ApoD type Patl_0580 085c33e86cb6b44f3e0c9a8d602994bc 187 SUPERFAMILY SSF50814 22 187 4.68E-50 T 11-10-2018 IPR012674 Calycin Patl_0580 085c33e86cb6b44f3e0c9a8d602994bc 187 ProSitePatterns PS00213 Lipocalin signature. 45 58 - T 11-10-2018 IPR022272 Lipocalin family conserved site Patl_0580 085c33e86cb6b44f3e0c9a8d602994bc 187 Pfam PF08212 Lipocalin-like domain 47 187 7.0E-44 T 11-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain Patl_0580 085c33e86cb6b44f3e0c9a8d602994bc 187 PRINTS PR01171 Bacterial lipocalin signature 46 60 1.1E-34 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Patl_0580 085c33e86cb6b44f3e0c9a8d602994bc 187 PRINTS PR01171 Bacterial lipocalin signature 82 91 1.1E-34 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Patl_0580 085c33e86cb6b44f3e0c9a8d602994bc 187 PRINTS PR01171 Bacterial lipocalin signature 149 160 1.1E-34 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Patl_0580 085c33e86cb6b44f3e0c9a8d602994bc 187 PRINTS PR01171 Bacterial lipocalin signature 116 130 1.1E-34 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Patl_0580 085c33e86cb6b44f3e0c9a8d602994bc 187 PRINTS PR01171 Bacterial lipocalin signature 63 79 1.1E-34 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Patl_0580 085c33e86cb6b44f3e0c9a8d602994bc 187 PRINTS PR01171 Bacterial lipocalin signature 176 186 1.1E-34 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 Patl_2590 c5ff6a3d67b567330e681edc47a52002 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 172.53 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Patl_2590 c5ff6a3d67b567330e681edc47a52002 398 Gene3D G3DSA:3.30.420.40 195 395 1.0E-77 T 11-10-2018 Patl_2590 c5ff6a3d67b567330e681edc47a52002 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Patl_2590 c5ff6a3d67b567330e681edc47a52002 398 Gene3D G3DSA:3.30.420.40 2 194 2.2E-67 T 11-10-2018 Patl_2590 c5ff6a3d67b567330e681edc47a52002 398 SUPERFAMILY SSF53067 156 393 3.39E-84 T 11-10-2018 Patl_2590 c5ff6a3d67b567330e681edc47a52002 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 394 6.8E-152 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Patl_2590 c5ff6a3d67b567330e681edc47a52002 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Patl_2590 c5ff6a3d67b567330e681edc47a52002 398 PRINTS PR00471 Acetate kinase family signature 172 185 5.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Patl_2590 c5ff6a3d67b567330e681edc47a52002 398 PRINTS PR00471 Acetate kinase family signature 5 16 5.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Patl_2590 c5ff6a3d67b567330e681edc47a52002 398 PRINTS PR00471 Acetate kinase family signature 321 337 5.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Patl_2590 c5ff6a3d67b567330e681edc47a52002 398 PRINTS PR00471 Acetate kinase family signature 299 312 5.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Patl_2590 c5ff6a3d67b567330e681edc47a52002 398 PRINTS PR00471 Acetate kinase family signature 376 388 5.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Patl_2590 c5ff6a3d67b567330e681edc47a52002 398 PRINTS PR00471 Acetate kinase family signature 202 223 5.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Patl_2590 c5ff6a3d67b567330e681edc47a52002 398 PIRSF PIRSF000722 1 398 6.5E-142 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Patl_2590 c5ff6a3d67b567330e681edc47a52002 398 SUPERFAMILY SSF53067 4 195 3.37E-62 T 11-10-2018 Patl_2590 c5ff6a3d67b567330e681edc47a52002 398 Pfam PF00871 Acetokinase family 5 389 1.4E-147 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Patl_2956 72d29594d5ebb66927baa97ee799c852 295 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_2956 72d29594d5ebb66927baa97ee799c852 295 Gene3D G3DSA:3.40.50.720 2 287 2.2E-75 T 11-10-2018 Patl_2956 72d29594d5ebb66927baa97ee799c852 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.3E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2956 72d29594d5ebb66927baa97ee799c852 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.3E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2956 72d29594d5ebb66927baa97ee799c852 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 6.3E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2956 72d29594d5ebb66927baa97ee799c852 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.3E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2956 72d29594d5ebb66927baa97ee799c852 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 6.3E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2956 72d29594d5ebb66927baa97ee799c852 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2956 72d29594d5ebb66927baa97ee799c852 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2956 72d29594d5ebb66927baa97ee799c852 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2956 72d29594d5ebb66927baa97ee799c852 295 SUPERFAMILY SSF51735 2 241 1.05E-63 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2956 72d29594d5ebb66927baa97ee799c852 295 Pfam PF00106 short chain dehydrogenase 8 202 2.7E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_4119 7bfcefafc7b6f7cefa40e1be47367bdf 338 Gene3D G3DSA:3.40.50.300 3 221 2.3E-64 T 11-10-2018 Patl_4119 7bfcefafc7b6f7cefa40e1be47367bdf 338 SUPERFAMILY SSF52540 4 244 5.86E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4119 7bfcefafc7b6f7cefa40e1be47367bdf 338 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_4119 7bfcefafc7b6f7cefa40e1be47367bdf 338 SUPERFAMILY SSF50331 236 329 2.21E-21 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Patl_4119 7bfcefafc7b6f7cefa40e1be47367bdf 338 SMART SM00382 28 217 6.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_4119 7bfcefafc7b6f7cefa40e1be47367bdf 338 Pfam PF08402 TOBE domain 255 324 1.5E-10 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Patl_4119 7bfcefafc7b6f7cefa40e1be47367bdf 338 Gene3D G3DSA:2.40.50.940 222 253 7.1E-13 T 11-10-2018 Patl_4119 7bfcefafc7b6f7cefa40e1be47367bdf 338 Pfam PF00005 ABC transporter 20 161 1.3E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_3560 a97757b99aa7ea7b4933b2645b7e2ea6 353 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 353 8.1E-140 T 11-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 Patl_3560 a97757b99aa7ea7b4933b2645b7e2ea6 353 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 353 5.1E-74 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Patl_2808 3ebe7c069cae854d8b9a902e8f69d253 234 Pfam PF00814 Glycoprotease family 28 227 1.1E-25 T 11-10-2018 IPR000905 Gcp-like domain Patl_2808 3ebe7c069cae854d8b9a902e8f69d253 234 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 222 7.0E-61 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 Patl_2808 3ebe7c069cae854d8b9a902e8f69d253 234 SUPERFAMILY SSF53067 3 105 1.9E-27 T 11-10-2018 Patl_2808 3ebe7c069cae854d8b9a902e8f69d253 234 Gene3D G3DSA:3.30.420.40 3 222 2.6E-73 T 11-10-2018 Patl_2808 3ebe7c069cae854d8b9a902e8f69d253 234 SUPERFAMILY SSF53067 109 220 1.94E-20 T 11-10-2018 Patl_2808 3ebe7c069cae854d8b9a902e8f69d253 234 Gene3D G3DSA:3.30.420.40 94 191 2.6E-73 T 11-10-2018 Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 Gene3D G3DSA:2.40.30.10 188 287 2.8E-34 T 11-10-2018 Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 Pfam PF03144 Elongation factor Tu domain 2 207 277 1.3E-8 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 SUPERFAMILY SSF54980 294 372 1.76E-18 T 11-10-2018 IPR035647 EF-G domain III/V-like Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 SUPERFAMILY SSF54980 401 495 1.29E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 SUPERFAMILY SSF50447 167 290 2.75E-28 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 Pfam PF00009 Elongation factor Tu GTP binding domain 4 183 3.3E-54 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 TIGRFAM TIGR01393 lepA: elongation factor 4 4 596 2.0E-300 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 PRINTS PR00315 GTP-binding elongation factor signature 128 137 3.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 PRINTS PR00315 GTP-binding elongation factor signature 8 21 3.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 PRINTS PR00315 GTP-binding elongation factor signature 92 103 3.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 PRINTS PR00315 GTP-binding elongation factor signature 51 59 3.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 PRINTS PR00315 GTP-binding elongation factor signature 76 86 3.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 SMART SM00838 400 488 8.2E-4 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 Gene3D G3DSA:3.40.50.300 1 187 9.6E-72 T 11-10-2018 Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 Pfam PF00679 Elongation factor G C-terminus 401 486 9.7E-21 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 598 306.533 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 178 5.8E-18 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 SUPERFAMILY SSF52540 1 207 8.5E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 Gene3D G3DSA:3.30.70.3380 370 480 2.2E-41 T 11-10-2018 Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 Gene3D G3DSA:3.30.70.870 288 369 1.0E-34 T 11-10-2018 Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 Gene3D G3DSA:3.30.70.2570 481 555 2.6E-33 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily Patl_3151 8b21ed22e16dad2850bf57b96a481dc1 598 Pfam PF06421 GTP-binding protein LepA C-terminus 489 595 3.3E-49 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Patl_3100 7f98c5bf858003dbfc622d2de4b49f1a 133 PIRSF PIRSF002889 1 131 1.7E-39 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Patl_3100 7f98c5bf858003dbfc622d2de4b49f1a 133 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 128 3.8E-34 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Patl_3100 7f98c5bf858003dbfc622d2de4b49f1a 133 Pfam PF00460 Flagella basal body rod protein 22 39 2.2E-6 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Patl_2112 bdc57f48c781d5ba5fc9fd790119006f 814 Gene3D G3DSA:2.140.10.10 556 814 5.9E-32 T 11-10-2018 Patl_2112 bdc57f48c781d5ba5fc9fd790119006f 814 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 17 813 1.0E-282 T 11-10-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 Patl_2112 bdc57f48c781d5ba5fc9fd790119006f 814 SUPERFAMILY SSF50998 169 812 1.11E-134 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Patl_2112 bdc57f48c781d5ba5fc9fd790119006f 814 SMART SM00564 221 252 0.0065 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_2112 bdc57f48c781d5ba5fc9fd790119006f 814 SMART SM00564 495 526 220.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_2112 bdc57f48c781d5ba5fc9fd790119006f 814 SMART SM00564 353 394 25.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_2112 bdc57f48c781d5ba5fc9fd790119006f 814 SMART SM00564 736 769 2.4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_2112 bdc57f48c781d5ba5fc9fd790119006f 814 Pfam PF13360 PQQ-like domain 691 783 1.6E-5 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Patl_2112 bdc57f48c781d5ba5fc9fd790119006f 814 Gene3D G3DSA:2.140.10.10 166 552 6.4E-106 T 11-10-2018 Patl_2112 bdc57f48c781d5ba5fc9fd790119006f 814 Pfam PF01011 PQQ enzyme repeat 226 256 1.1E-5 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Patl_2112 bdc57f48c781d5ba5fc9fd790119006f 814 Pfam PF01011 PQQ enzyme repeat 453 482 2.4E-5 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Patl_2438 cf53c1c238db74ab1e235d0726e38f3f 458 Pfam PF00270 DEAD/DEAH box helicase 25 194 1.8E-47 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Patl_2438 cf53c1c238db74ab1e235d0726e38f3f 458 Pfam PF00271 Helicase conserved C-terminal domain 230 338 2.6E-28 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_2438 cf53c1c238db74ab1e235d0726e38f3f 458 Gene3D G3DSA:3.40.50.300 214 448 3.4E-50 T 11-10-2018 Patl_2438 cf53c1c238db74ab1e235d0726e38f3f 458 SUPERFAMILY SSF52540 73 359 1.1E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2438 cf53c1c238db74ab1e235d0726e38f3f 458 SMART SM00487 20 228 3.0E-55 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_2438 cf53c1c238db74ab1e235d0726e38f3f 458 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Patl_2438 cf53c1c238db74ab1e235d0726e38f3f 458 Gene3D G3DSA:3.40.50.300 1 210 5.1E-72 T 11-10-2018 Patl_2438 cf53c1c238db74ab1e235d0726e38f3f 458 SMART SM00490 257 338 9.6E-31 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_0525 ed71c1d1d95b5d5a9705b4ddeb056dcc 573 Gene3D G3DSA:1.20.1730.10 353 563 9.7E-26 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Patl_0525 ed71c1d1d95b5d5a9705b4ddeb056dcc 573 Gene3D G3DSA:1.20.1730.10 20 342 1.0E-38 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Patl_0525 ed71c1d1d95b5d5a9705b4ddeb056dcc 573 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 564 1.3E-264 T 11-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily Patl_0525 ed71c1d1d95b5d5a9705b4ddeb056dcc 573 Pfam PF00474 Sodium:solute symporter family 380 495 7.6E-16 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_0525 ed71c1d1d95b5d5a9705b4ddeb056dcc 573 Pfam PF00474 Sodium:solute symporter family 33 303 1.1E-34 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_2589 c69cbe898d3c9b974019c7085d11e8a6 196 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 190 7.2E-74 T 11-10-2018 IPR017757 Transcriptional repressor BetI Patl_2589 c69cbe898d3c9b974019c7085d11e8a6 196 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 196 94.669 T 11-10-2018 IPR017757 Transcriptional repressor BetI Patl_2589 c69cbe898d3c9b974019c7085d11e8a6 196 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 83 191 5.9E-29 T 11-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal Patl_2589 c69cbe898d3c9b974019c7085d11e8a6 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 8.4E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_2589 c69cbe898d3c9b974019c7085d11e8a6 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 4.4E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_2589 c69cbe898d3c9b974019c7085d11e8a6 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 4.4E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_2589 c69cbe898d3c9b974019c7085d11e8a6 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Patl_2589 c69cbe898d3c9b974019c7085d11e8a6 196 Gene3D G3DSA:1.10.357.10 6 194 1.8E-39 T 11-10-2018 Patl_2589 c69cbe898d3c9b974019c7085d11e8a6 196 SUPERFAMILY SSF48498 83 174 3.11E-12 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Patl_2589 c69cbe898d3c9b974019c7085d11e8a6 196 SUPERFAMILY SSF46689 5 83 2.62E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_2986 5818cfbefc7e16fb451007cb46b3323d 204 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 124 201 2.2E-18 T 11-10-2018 IPR006260 TonB/TolA, C-terminal Patl_2986 5818cfbefc7e16fb451007cb46b3323d 204 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 123 201 2.8E-19 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 Patl_2986 5818cfbefc7e16fb451007cb46b3323d 204 Gene3D G3DSA:3.30.1150.10 104 202 1.3E-27 T 11-10-2018 Patl_2986 5818cfbefc7e16fb451007cb46b3323d 204 PRINTS PR01374 Gram-negative bacterial tonB protein signature 139 157 1.4E-16 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Patl_2986 5818cfbefc7e16fb451007cb46b3323d 204 PRINTS PR01374 Gram-negative bacterial tonB protein signature 118 139 1.4E-16 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Patl_2986 5818cfbefc7e16fb451007cb46b3323d 204 PRINTS PR01374 Gram-negative bacterial tonB protein signature 158 175 1.4E-16 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Patl_2986 5818cfbefc7e16fb451007cb46b3323d 204 PRINTS PR01374 Gram-negative bacterial tonB protein signature 62 72 1.4E-16 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Patl_2986 5818cfbefc7e16fb451007cb46b3323d 204 SUPERFAMILY SSF74653 114 192 2.62E-24 T 11-10-2018 Patl_1334 3c617207639c1dc44bef9b91d86ff3f4 255 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 10 253 8.7E-90 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD Patl_1334 3c617207639c1dc44bef9b91d86ff3f4 255 Pfam PF13525 Outer membrane lipoprotein 36 240 7.4E-74 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like Patl_1334 3c617207639c1dc44bef9b91d86ff3f4 255 Gene3D G3DSA:1.25.40.10 36 254 9.0E-60 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1334 3c617207639c1dc44bef9b91d86ff3f4 255 SUPERFAMILY SSF48452 31 126 2.37E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1334 3c617207639c1dc44bef9b91d86ff3f4 255 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 5 248 36.653 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD Patl_2524 7ad006ec7176df3a973c9ce157f17f9f 190 Gene3D G3DSA:2.30.30.30 3 64 3.6E-11 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Patl_2524 7ad006ec7176df3a973c9ce157f17f9f 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 2.7E-80 T 11-10-2018 IPR011897 Translation elongation factor P-like, YeiP Patl_2524 7ad006ec7176df3a973c9ce157f17f9f 190 SUPERFAMILY SSF50249 132 188 6.85E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_2524 7ad006ec7176df3a973c9ce157f17f9f 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 1.5E-16 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like Patl_2524 7ad006ec7176df3a973c9ce157f17f9f 190 PIRSF PIRSF005901 1 189 4.5E-64 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP Patl_2524 7ad006ec7176df3a973c9ce157f17f9f 190 SUPERFAMILY SSF50104 1 64 5.42E-11 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Patl_2524 7ad006ec7176df3a973c9ce157f17f9f 190 SUPERFAMILY SSF50249 70 129 2.95E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_2524 7ad006ec7176df3a973c9ce157f17f9f 190 SMART SM00841 132 187 9.1E-29 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Patl_2524 7ad006ec7176df3a973c9ce157f17f9f 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 41.145 T 11-10-2018 IPR011897 Translation elongation factor P-like, YeiP Patl_2524 7ad006ec7176df3a973c9ce157f17f9f 190 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Patl_2524 7ad006ec7176df3a973c9ce157f17f9f 190 Gene3D G3DSA:2.40.50.140 67 129 1.6E-15 T 11-10-2018 Patl_2524 7ad006ec7176df3a973c9ce157f17f9f 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.9E-14 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Patl_2524 7ad006ec7176df3a973c9ce157f17f9f 190 SMART SM01185 69 124 9.8E-16 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Patl_2524 7ad006ec7176df3a973c9ce157f17f9f 190 Pfam PF09285 Elongation factor P, C-terminal 132 187 4.2E-21 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Patl_2524 7ad006ec7176df3a973c9ce157f17f9f 190 Gene3D G3DSA:2.40.50.140 131 188 2.2E-22 T 11-10-2018 Patl_3188 1f52ebd5fc26029815b8ab1d8e671907 214 Gene3D G3DSA:3.40.630.30 19 201 1.5E-16 T 11-10-2018 Patl_3188 1f52ebd5fc26029815b8ab1d8e671907 214 SUPERFAMILY SSF55729 21 169 2.93E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_3188 1f52ebd5fc26029815b8ab1d8e671907 214 Pfam PF00583 Acetyltransferase (GNAT) family 123 180 1.9E-4 T 11-10-2018 IPR000182 GNAT domain Patl_0075 de07aaa3af34c8793a18d9757e2fecf6 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.226 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Patl_0075 de07aaa3af34c8793a18d9757e2fecf6 90 Gene3D G3DSA:1.10.3880.10 1 90 2.9E-38 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 Patl_0075 de07aaa3af34c8793a18d9757e2fecf6 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 2.8E-43 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Patl_0075 de07aaa3af34c8793a18d9757e2fecf6 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 1.0E-39 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Patl_0075 de07aaa3af34c8793a18d9757e2fecf6 90 PIRSF PIRSF029827 1 90 8.8E-44 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 Patl_0075 de07aaa3af34c8793a18d9757e2fecf6 90 SUPERFAMILY SSF111148 1 89 3.53E-40 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 Pfam PF00271 Helicase conserved C-terminal domain 227 327 5.2E-20 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 SMART SM00956 408 511 1.9E-46 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 12 597 3.2E-239 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 SMART SM00341 525 602 1.6E-19 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 Pfam PF00570 HRDC domain 529 595 4.1E-23 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 SMART SM00490 247 328 3.8E-25 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 Gene3D G3DSA:1.10.150.80 519 601 1.0E-26 T 11-10-2018 Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 13 461 5.1E-174 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 Pfam PF09382 RQC domain 403 511 1.8E-35 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 Gene3D G3DSA:1.10.10.10 338 518 7.2E-48 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 SUPERFAMILY SSF47819 524 600 2.14E-25 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 SUPERFAMILY SSF52540 206 454 5.08E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 Gene3D G3DSA:3.40.50.300 207 337 2.5E-38 T 11-10-2018 Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 Gene3D G3DSA:3.40.50.300 4 206 6.9E-82 T 11-10-2018 Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 Pfam PF00270 DEAD/DEAH box helicase 26 183 4.9E-20 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 SMART SM00487 20 216 7.7E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 Pfam PF16124 RecQ zinc-binding 340 401 2.5E-14 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain Patl_0252 1f70d37fa4a83b55cf4d1995f823d103 602 SUPERFAMILY SSF52540 12 200 2.28E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3961 873c92eccd51c46ebe0c6a455e00288d 204 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 5 200 42.861 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Patl_3961 873c92eccd51c46ebe0c6a455e00288d 204 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 10 197 1.1E-75 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Patl_3961 873c92eccd51c46ebe0c6a455e00288d 204 Gene3D G3DSA:3.40.50.10990 6 177 1.0E-71 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Patl_3961 873c92eccd51c46ebe0c6a455e00288d 204 SUPERFAMILY SSF142695 8 175 4.84E-63 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Patl_3961 873c92eccd51c46ebe0c6a455e00288d 204 Pfam PF00925 GTP cyclohydrolase II 12 174 2.1E-67 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Patl_0582 7656724d7ef2e2846c01c95f3fb9486f 112 Gene3D G3DSA:2.30.30.40 43 112 1.8E-35 T 11-10-2018 Patl_0582 7656724d7ef2e2846c01c95f3fb9486f 112 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 111 2.5E-50 T 11-10-2018 IPR004624 PhnA protein Patl_0582 7656724d7ef2e2846c01c95f3fb9486f 112 SUPERFAMILY SSF82057 40 112 1.56E-29 T 11-10-2018 Patl_0582 7656724d7ef2e2846c01c95f3fb9486f 112 Pfam PF08274 PhnA Zinc-Ribbon 4 32 1.9E-14 T 11-10-2018 IPR013987 PhnA protein, N-terminal Patl_0582 7656724d7ef2e2846c01c95f3fb9486f 112 Pfam PF03831 PhnA domain 45 112 1.9E-33 T 11-10-2018 IPR013988 PhnA protein, C-terminal Patl_0582 7656724d7ef2e2846c01c95f3fb9486f 112 SUPERFAMILY SSF57783 3 37 2.38E-13 T 11-10-2018 Patl_0582 7656724d7ef2e2846c01c95f3fb9486f 112 Gene3D G3DSA:2.20.25.10 1 42 2.4E-18 T 11-10-2018 Patl_0194 9b5a9a4fc602f423387124bbcc2a372e 638 SUPERFAMILY SSF82171 51 370 2.09E-37 T 11-10-2018 Patl_0194 9b5a9a4fc602f423387124bbcc2a372e 638 SUPERFAMILY SSF53474 385 636 2.77E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0194 9b5a9a4fc602f423387124bbcc2a372e 638 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 472 502 - T 11-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 Patl_0194 9b5a9a4fc602f423387124bbcc2a372e 638 Gene3D G3DSA:2.130.10.120 93 366 3.2E-16 T 11-10-2018 Patl_0194 9b5a9a4fc602f423387124bbcc2a372e 638 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 202 366 6.4E-9 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 Patl_0194 9b5a9a4fc602f423387124bbcc2a372e 638 Pfam PF00326 Prolyl oligopeptidase family 432 636 2.1E-41 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Patl_0194 9b5a9a4fc602f423387124bbcc2a372e 638 Gene3D G3DSA:3.40.50.1820 367 637 3.7E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1053 218c773838eb42fc6246db641d7e4080 229 SMART SM00862 150 225 9.0E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_1053 218c773838eb42fc6246db641d7e4080 229 SMART SM00448 3 116 8.4E-47 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1053 218c773838eb42fc6246db641d7e4080 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.2E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_1053 218c773838eb42fc6246db641d7e4080 229 Gene3D G3DSA:1.10.10.10 128 228 8.4E-39 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1053 218c773838eb42fc6246db641d7e4080 229 Pfam PF00072 Response regulator receiver domain 5 117 1.2E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1053 218c773838eb42fc6246db641d7e4080 229 SUPERFAMILY SSF46894 128 227 2.01E-32 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_1053 218c773838eb42fc6246db641d7e4080 229 Gene3D G3DSA:3.40.50.2300 1 127 7.1E-40 T 11-10-2018 Patl_1053 218c773838eb42fc6246db641d7e4080 229 SUPERFAMILY SSF52172 3 128 6.97E-44 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1053 218c773838eb42fc6246db641d7e4080 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 2.7E-110 T 11-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 Patl_1708 9df7b28cf2202a2ee60e5461cd27812a 83 Gene3D G3DSA:2.30.30.90 6 83 1.0E-17 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain Patl_1708 9df7b28cf2202a2ee60e5461cd27812a 83 SMART SM00899 7 81 4.5E-13 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Patl_1708 9df7b28cf2202a2ee60e5461cd27812a 83 Pfam PF04023 FeoA domain 7 79 1.4E-14 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Patl_1708 9df7b28cf2202a2ee60e5461cd27812a 83 SUPERFAMILY SSF50037 11 80 3.89E-14 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal Patl_3991 b0f61ad129fe880cc7c35ab85011c743 167 SUPERFAMILY SSF52540 3 163 1.3E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3991 b0f61ad129fe880cc7c35ab85011c743 167 PRINTS PR00449 Transforming protein P21 ras signature 27 43 3.6E-23 T 11-10-2018 Patl_3991 b0f61ad129fe880cc7c35ab85011c743 167 PRINTS PR00449 Transforming protein P21 ras signature 139 161 3.6E-23 T 11-10-2018 Patl_3991 b0f61ad129fe880cc7c35ab85011c743 167 PRINTS PR00449 Transforming protein P21 ras signature 45 67 3.6E-23 T 11-10-2018 Patl_3991 b0f61ad129fe880cc7c35ab85011c743 167 PRINTS PR00449 Transforming protein P21 ras signature 4 25 3.6E-23 T 11-10-2018 Patl_3991 b0f61ad129fe880cc7c35ab85011c743 167 PRINTS PR00449 Transforming protein P21 ras signature 105 118 3.6E-23 T 11-10-2018 Patl_3991 b0f61ad129fe880cc7c35ab85011c743 167 SMART SM00173 1 164 2.1E-7 T 11-10-2018 Patl_3991 b0f61ad129fe880cc7c35ab85011c743 167 SMART SM00175 5 164 1.3E-11 T 11-10-2018 Patl_3991 b0f61ad129fe880cc7c35ab85011c743 167 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 156 7.1E-18 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Patl_3991 b0f61ad129fe880cc7c35ab85011c743 167 Gene3D G3DSA:3.40.50.300 2 167 1.1E-39 T 11-10-2018 Patl_3991 b0f61ad129fe880cc7c35ab85011c743 167 Pfam PF00071 Ras family 5 162 7.8E-28 T 11-10-2018 IPR001806 Small GTPase GO:0003924|GO:0005525 Patl_0649 6186e5187dfaf5844a21935e4a4c1722 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Patl_0649 6186e5187dfaf5844a21935e4a4c1722 490 Gene3D G3DSA:3.40.309.10 250 441 5.9E-141 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Patl_0649 6186e5187dfaf5844a21935e4a4c1722 490 SUPERFAMILY SSF53720 3 459 1.06E-123 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_0649 6186e5187dfaf5844a21935e4a4c1722 490 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 4 490 56.996 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 Patl_0649 6186e5187dfaf5844a21935e4a4c1722 490 Pfam PF00171 Aldehyde dehydrogenase family 12 464 2.4E-119 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Patl_0649 6186e5187dfaf5844a21935e4a4c1722 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Patl_0649 6186e5187dfaf5844a21935e4a4c1722 490 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 6 490 4.7E-247 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 Patl_0649 6186e5187dfaf5844a21935e4a4c1722 490 Gene3D G3DSA:3.40.605.10 10 453 5.9E-141 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_2928 902690b5f0b9dc4989840977ecf240e1 675 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 624 641 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Patl_2928 902690b5f0b9dc4989840977ecf240e1 675 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 8.8E-40 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Patl_2928 902690b5f0b9dc4989840977ecf240e1 675 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.4E-46 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Patl_2928 902690b5f0b9dc4989840977ecf240e1 675 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 6.2E-72 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Patl_2928 902690b5f0b9dc4989840977ecf240e1 675 Gene3D G3DSA:3.30.470.130 1 451 2.2E-199 T 11-10-2018 Patl_2928 902690b5f0b9dc4989840977ecf240e1 675 SMART SM00878 336 443 4.5E-57 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Patl_2928 902690b5f0b9dc4989840977ecf240e1 675 SUPERFAMILY SSF51246 331 449 6.28E-41 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Patl_2928 902690b5f0b9dc4989840977ecf240e1 675 SUPERFAMILY SSF56059 83 345 1.52E-66 T 11-10-2018 Patl_2928 902690b5f0b9dc4989840977ecf240e1 675 SUPERFAMILY SSF52440 1 113 1.87E-50 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Patl_2928 902690b5f0b9dc4989840977ecf240e1 675 Gene3D G3DSA:2.40.50.100 602 667 3.8E-20 T 11-10-2018 Patl_2928 902690b5f0b9dc4989840977ecf240e1 675 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Patl_2928 902690b5f0b9dc4989840977ecf240e1 675 Pfam PF00364 Biotin-requiring enzyme 602 665 1.0E-13 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Patl_2928 902690b5f0b9dc4989840977ecf240e1 675 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Patl_2928 902690b5f0b9dc4989840977ecf240e1 675 SUPERFAMILY SSF51230 594 665 2.88E-18 T 11-10-2018 IPR011053 Single hybrid motif Patl_3739 c41177b98ca98607c27a2989adbcbf0b 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site Patl_3739 c41177b98ca98607c27a2989adbcbf0b 323 SUPERFAMILY SSF48576 5 322 2.75E-97 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Patl_3739 c41177b98ca98607c27a2989adbcbf0b 323 Pfam PF00348 Polyprenyl synthetase 32 262 2.1E-75 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Patl_3739 c41177b98ca98607c27a2989adbcbf0b 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site Patl_3739 c41177b98ca98607c27a2989adbcbf0b 323 Gene3D G3DSA:1.10.600.10 1 322 4.1E-114 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Patl_0787 552613cb341866236074e6cbbf20de17 224 Pfam PF04542 Sigma-70 region 2 43 102 2.2E-5 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Patl_0787 552613cb341866236074e6cbbf20de17 224 Gene3D G3DSA:1.10.1740.10 22 105 3.2E-6 T 11-10-2018 Patl_0787 552613cb341866236074e6cbbf20de17 224 SUPERFAMILY SSF88946 37 123 2.2E-8 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Patl_0787 552613cb341866236074e6cbbf20de17 224 SUPERFAMILY SSF88659 129 197 2.8E-8 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_0787 552613cb341866236074e6cbbf20de17 224 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 195 8.8E-16 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Patl_0787 552613cb341866236074e6cbbf20de17 224 Gene3D G3DSA:1.10.10.10 113 202 4.1E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2182 c32615250eabd4765eed005e4b1f8811 872 SUPERFAMILY SSF53474 507 766 1.03E-11 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2182 c32615250eabd4765eed005e4b1f8811 872 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 857 2.1E-296 T 11-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family Patl_2182 c32615250eabd4765eed005e4b1f8811 872 Gene3D G3DSA:3.40.50.1820 476 660 5.5E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2182 c32615250eabd4765eed005e4b1f8811 872 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 279 3.9E-17 T 11-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain Patl_4222 82bc3638538cea2173ed4e0ef9b47130 108 Pfam PF00085 Thioredoxin 5 106 3.8E-33 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 Patl_4222 82bc3638538cea2173ed4e0ef9b47130 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.3E-37 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Patl_4222 82bc3638538cea2173ed4e0ef9b47130 108 PIRSF PIRSF000077 2 108 5.8E-43 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Patl_4222 82bc3638538cea2173ed4e0ef9b47130 108 SUPERFAMILY SSF52833 2 107 7.5E-40 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_4222 82bc3638538cea2173ed4e0ef9b47130 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 11-10-2018 Patl_4222 82bc3638538cea2173ed4e0ef9b47130 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 11-10-2018 Patl_4222 82bc3638538cea2173ed4e0ef9b47130 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 11-10-2018 Patl_4222 82bc3638538cea2173ed4e0ef9b47130 108 Gene3D G3DSA:3.40.30.10 1 108 5.3E-36 T 11-10-2018 Patl_4222 82bc3638538cea2173ed4e0ef9b47130 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Patl_1018 60a7374a802260c358549ee7efcf9193 326 Pfam PF00491 Arginase family 43 320 5.4E-54 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 Patl_1018 60a7374a802260c358549ee7efcf9193 326 PIRSF PIRSF036979 24 325 3.6E-25 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 Patl_1018 60a7374a802260c358549ee7efcf9193 326 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 322 37.08 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 Patl_1018 60a7374a802260c358549ee7efcf9193 326 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 322 4.6E-82 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 Patl_1018 60a7374a802260c358549ee7efcf9193 326 Gene3D G3DSA:3.40.800.10 4 325 2.0E-101 T 11-10-2018 Patl_1018 60a7374a802260c358549ee7efcf9193 326 SUPERFAMILY SSF52768 12 323 5.04E-69 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily Patl_0176 e3078945f9b15afced60586c9247a8bb 212 Gene3D G3DSA:3.30.700.10 23 150 2.0E-13 T 11-10-2018 Patl_0176 e3078945f9b15afced60586c9247a8bb 212 Pfam PF07963 Prokaryotic N-terminal methylation motif 19 43 6.6E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0176 e3078945f9b15afced60586c9247a8bb 212 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 21 41 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0176 e3078945f9b15afced60586c9247a8bb 212 SUPERFAMILY SSF54523 23 77 1.1E-11 T 11-10-2018 Patl_0176 e3078945f9b15afced60586c9247a8bb 212 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 43 2.2E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_2938 ca7adb4269e9310fe15c8e2c674af3b5 186 PRINTS PR01021 OMPA domain signature 130 146 7.5E-17 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Patl_2938 ca7adb4269e9310fe15c8e2c674af3b5 186 PRINTS PR01021 OMPA domain signature 115 130 7.5E-17 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Patl_2938 ca7adb4269e9310fe15c8e2c674af3b5 186 PRINTS PR01021 OMPA domain signature 85 107 7.5E-17 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Patl_2938 ca7adb4269e9310fe15c8e2c674af3b5 186 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 185 28.519 T 11-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 Patl_2938 ca7adb4269e9310fe15c8e2c674af3b5 186 SUPERFAMILY SSF103088 64 181 1.96E-33 T 11-10-2018 IPR036737 OmpA-like domain superfamily Patl_2938 ca7adb4269e9310fe15c8e2c674af3b5 186 Pfam PF00691 OmpA family 84 179 5.8E-24 T 11-10-2018 IPR006665 OmpA-like domain Patl_2938 ca7adb4269e9310fe15c8e2c674af3b5 186 Gene3D G3DSA:3.30.1330.60 53 185 2.3E-39 T 11-10-2018 IPR036737 OmpA-like domain superfamily Patl_2938 ca7adb4269e9310fe15c8e2c674af3b5 186 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 83 185 1.6E-41 T 11-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 SMART SM00316 619 689 7.2E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 SUPERFAMILY SSF55666 449 548 1.4E-28 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 Gene3D G3DSA:3.30.230.70 2 234 4.0E-76 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 Pfam PF00575 S1 RNA binding domain 618 689 3.7E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 SMART SM00322 551 616 4.8E-10 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 692 30.027 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 Gene3D G3DSA:3.30.230.70 235 548 2.4E-115 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 690 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 Gene3D G3DSA:2.40.50.140 621 692 1.8E-28 T 11-10-2018 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 SUPERFAMILY SSF54211 291 487 1.01E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 2.2E-10 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 Pfam PF03725 3' exoribonuclease family, domain 2 459 528 1.1E-5 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 SUPERFAMILY SSF54791 553 620 6.75E-15 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 Pfam PF01138 3' exoribonuclease family, domain 1 323 455 4.8E-22 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 7.0E-18 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 Pfam PF00013 KH domain 555 612 2.7E-8 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 Gene3D G3DSA:3.30.1370.10 549 620 3.9E-17 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 SUPERFAMILY SSF55666 144 233 3.37E-29 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 PIRSF PIRSF005499 1 703 1.8E-294 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 319 7.0E-20 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 SUPERFAMILY SSF50249 608 694 3.86E-21 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_1632 b9a1f3b2b7c9d427eb2590f213d2ff47 703 SUPERFAMILY SSF54211 3 143 7.59E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_3947 53a355c542839e3dd88042ebd6739e8f 413 Pfam PF00563 EAL domain 50 190 5.8E-12 T 11-10-2018 IPR001633 EAL domain Patl_3947 53a355c542839e3dd88042ebd6739e8f 413 Gene3D G3DSA:3.20.20.450 4 194 6.7E-15 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3947 53a355c542839e3dd88042ebd6739e8f 413 PIRSF PIRSF003180 1 404 1.8E-127 T 11-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing Patl_3947 53a355c542839e3dd88042ebd6739e8f 413 Gene3D G3DSA:1.10.3210.10 195 339 5.4E-23 T 11-10-2018 Patl_3947 53a355c542839e3dd88042ebd6739e8f 413 SUPERFAMILY SSF109604 181 399 2.29E-43 T 11-10-2018 Patl_3947 53a355c542839e3dd88042ebd6739e8f 413 Pfam PF08668 HDOD domain 198 319 3.5E-13 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Patl_3947 53a355c542839e3dd88042ebd6739e8f 413 SUPERFAMILY SSF141868 5 194 1.03E-23 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3973 435888608c8f122a618af027c00aea41 504 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 14 216 5.3E-39 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Patl_3973 435888608c8f122a618af027c00aea41 504 Pfam PF03853 YjeF-related protein N-terminus 37 196 4.6E-39 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Patl_3973 435888608c8f122a618af027c00aea41 504 SUPERFAMILY SSF53613 236 500 1.56E-69 T 11-10-2018 IPR029056 Ribokinase-like Patl_3973 435888608c8f122a618af027c00aea41 504 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 231 502 20.971 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Patl_3973 435888608c8f122a618af027c00aea41 504 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 230 500 2.1E-66 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Patl_3973 435888608c8f122a618af027c00aea41 504 Pfam PF01256 Carbohydrate kinase 257 495 4.7E-54 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Patl_3973 435888608c8f122a618af027c00aea41 504 PIRSF PIRSF017184 12 504 7.7E-126 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 Patl_3973 435888608c8f122a618af027c00aea41 504 Gene3D G3DSA:3.40.1190.20 235 503 8.6E-81 T 11-10-2018 IPR029056 Ribokinase-like Patl_3973 435888608c8f122a618af027c00aea41 504 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 16 217 21.892 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Patl_3973 435888608c8f122a618af027c00aea41 504 Gene3D G3DSA:3.40.50.10260 10 222 1.0E-56 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Patl_3973 435888608c8f122a618af027c00aea41 504 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 441 451 - T 11-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site Patl_3973 435888608c8f122a618af027c00aea41 504 SUPERFAMILY SSF64153 15 253 5.75E-59 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Patl_3050 3a8707a6c7fc3f4a61aa672997c201f9 398 Gene3D G3DSA:1.10.287.130 148 222 4.6E-12 T 11-10-2018 Patl_3050 3a8707a6c7fc3f4a61aa672997c201f9 398 SUPERFAMILY SSF47384 154 225 3.92E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_3050 3a8707a6c7fc3f4a61aa672997c201f9 398 SMART SM00388 159 225 5.4E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3050 3a8707a6c7fc3f4a61aa672997c201f9 398 SUPERFAMILY SSF55785 43 136 9.94E-9 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3050 3a8707a6c7fc3f4a61aa672997c201f9 398 Gene3D G3DSA:3.30.450.20 42 147 8.2E-7 T 11-10-2018 Patl_3050 3a8707a6c7fc3f4a61aa672997c201f9 398 SMART SM00387 268 377 4.9E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3050 3a8707a6c7fc3f4a61aa672997c201f9 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 322 8.4E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3050 3a8707a6c7fc3f4a61aa672997c201f9 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 374 8.4E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3050 3a8707a6c7fc3f4a61aa672997c201f9 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 336 8.4E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3050 3a8707a6c7fc3f4a61aa672997c201f9 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 355 8.4E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3050 3a8707a6c7fc3f4a61aa672997c201f9 398 Gene3D G3DSA:3.30.565.10 229 382 1.5E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3050 3a8707a6c7fc3f4a61aa672997c201f9 398 Pfam PF00512 His Kinase A (phospho-acceptor) domain 159 224 4.8E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3050 3a8707a6c7fc3f4a61aa672997c201f9 398 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 270 374 2.6E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3050 3a8707a6c7fc3f4a61aa672997c201f9 398 SUPERFAMILY SSF55874 214 376 6.16E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0106 07789177b4e40b490639e6fb7a8a9b72 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 200 1.7E-13 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Patl_0106 07789177b4e40b490639e6fb7a8a9b72 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.1E-16 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Patl_0106 07789177b4e40b490639e6fb7a8a9b72 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 242 367 4.5E-21 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_0106 07789177b4e40b490639e6fb7a8a9b72 379 Gene3D G3DSA:1.20.140.10 237 377 1.8E-28 T 11-10-2018 Patl_0106 07789177b4e40b490639e6fb7a8a9b72 379 Gene3D G3DSA:1.10.540.10 1 118 4.9E-28 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Patl_0106 07789177b4e40b490639e6fb7a8a9b72 379 SUPERFAMILY SSF56645 1 226 1.31E-51 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_0106 07789177b4e40b490639e6fb7a8a9b72 379 SUPERFAMILY SSF47203 229 371 3.7E-31 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_0106 07789177b4e40b490639e6fb7a8a9b72 379 Gene3D G3DSA:2.40.110.10 121 235 6.8E-24 T 11-10-2018 Patl_2971 230903df6a0c6941608c4f0e946aba51 210 Hamap MF_00942 Endonuclease III [nth]. 1 209 35.916 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Patl_2971 230903df6a0c6941608c4f0e946aba51 210 TIGRFAM TIGR01083 nth: endonuclease III 4 194 8.1E-84 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Patl_2971 230903df6a0c6941608c4f0e946aba51 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 2.7E-16 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Patl_2971 230903df6a0c6941608c4f0e946aba51 210 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Patl_2971 230903df6a0c6941608c4f0e946aba51 210 SUPERFAMILY SSF48150 2 207 4.55E-71 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Patl_2971 230903df6a0c6941608c4f0e946aba51 210 PIRSF PIRSF001435 1 210 7.8E-49 T 11-10-2018 Patl_2971 230903df6a0c6941608c4f0e946aba51 210 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Patl_2971 230903df6a0c6941608c4f0e946aba51 210 Gene3D G3DSA:1.10.340.30 21 132 5.8E-74 T 11-10-2018 Patl_2971 230903df6a0c6941608c4f0e946aba51 210 Pfam PF00633 Helix-hairpin-helix motif 100 127 6.0E-7 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Patl_2971 230903df6a0c6941608c4f0e946aba51 210 SMART SM00478 38 185 6.4E-50 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Patl_2971 230903df6a0c6941608c4f0e946aba51 210 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Patl_2971 230903df6a0c6941608c4f0e946aba51 210 Gene3D G3DSA:1.10.1670.10 11 203 5.8E-74 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Patl_2971 230903df6a0c6941608c4f0e946aba51 210 SMART SM00525 186 206 4.4E-5 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Patl_2294 3ab0b113c70431f8b232152779f78eef 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 6.2E-101 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Patl_2294 3ab0b113c70431f8b232152779f78eef 426 PIRSF PIRSF006066 1 426 4.6E-73 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Patl_2294 3ab0b113c70431f8b232152779f78eef 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 421 1.6E-100 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Patl_3968 dc6756c28ea20fd804103402c3843a45 735 SUPERFAMILY SSF82171 20 466 1.57E-64 T 11-10-2018 Patl_3968 dc6756c28ea20fd804103402c3843a45 735 Gene3D G3DSA:3.40.50.1820 486 734 2.5E-78 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3968 dc6756c28ea20fd804103402c3843a45 735 Pfam PF00326 Prolyl oligopeptidase family 537 734 1.2E-55 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Patl_3968 dc6756c28ea20fd804103402c3843a45 735 Gene3D G3DSA:2.140.10.30 21 475 9.4E-160 T 11-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily Patl_3968 dc6756c28ea20fd804103402c3843a45 735 SUPERFAMILY SSF53474 487 732 2.7E-75 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3968 dc6756c28ea20fd804103402c3843a45 735 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 124 447 6.0E-101 T 11-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 Patl_3057 992791067464ecc5c5e4e0b98c3aa092 231 Gene3D G3DSA:3.40.50.170 1 185 3.5E-23 T 11-10-2018 Patl_3057 992791067464ecc5c5e4e0b98c3aa092 231 SUPERFAMILY SSF53328 32 155 3.01E-24 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Patl_3057 992791067464ecc5c5e4e0b98c3aa092 231 Pfam PF00551 Formyl transferase 20 154 6.3E-19 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Patl_3057 992791067464ecc5c5e4e0b98c3aa092 231 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 127 150 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Patl_0628 de8e0374fb2001e59471623eefe881ed 213 SUPERFAMILY SSF46785 6 71 6.82E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0628 de8e0374fb2001e59471623eefe881ed 213 Gene3D G3DSA:1.20.120.530 71 212 1.3E-22 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_0628 de8e0374fb2001e59471623eefe881ed 213 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 65 3.2E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_0628 de8e0374fb2001e59471623eefe881ed 213 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 4.4E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_0628 de8e0374fb2001e59471623eefe881ed 213 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 4.4E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_0628 de8e0374fb2001e59471623eefe881ed 213 Pfam PF07729 FCD domain 77 199 1.9E-19 T 11-10-2018 IPR011711 GntR, C-terminal Patl_0628 de8e0374fb2001e59471623eefe881ed 213 Gene3D G3DSA:1.10.10.10 2 69 5.9E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0628 de8e0374fb2001e59471623eefe881ed 213 SMART SM00895 77 200 6.0E-10 T 11-10-2018 IPR011711 GntR, C-terminal Patl_0628 de8e0374fb2001e59471623eefe881ed 213 SMART SM00345 9 67 3.8E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_0628 de8e0374fb2001e59471623eefe881ed 213 SUPERFAMILY SSF48008 74 208 2.33E-19 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_2013 36cdf23761c1348dd461c3c5f9a988ec 215 Pfam PF01794 Ferric reductase like transmembrane component 54 166 2.4E-16 T 11-10-2018 IPR013130 Ferric reductase transmembrane component-like domain Patl_2013 36cdf23761c1348dd461c3c5f9a988ec 215 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 9 209 21.416 T 11-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 Patl_2531 b8ec848f6dc5ca3e1565e1a63de7956b 342 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 70 314 1.1E-83 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Patl_2531 b8ec848f6dc5ca3e1565e1a63de7956b 342 Gene3D G3DSA:3.30.950.10 186 323 2.6E-41 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Patl_2531 b8ec848f6dc5ca3e1565e1a63de7956b 342 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 72 289 2.1E-43 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Patl_2531 b8ec848f6dc5ca3e1565e1a63de7956b 342 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 75 89 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Patl_2531 b8ec848f6dc5ca3e1565e1a63de7956b 342 Gene3D G3DSA:3.40.1010.10 69 185 6.6E-39 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Patl_2531 b8ec848f6dc5ca3e1565e1a63de7956b 342 SUPERFAMILY SSF53790 68 317 2.88E-69 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Patl_1653 09edd3d949627e2826278fae324f335f 511 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 438 4.1E-94 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_1653 09edd3d949627e2826278fae324f335f 511 Pfam PF00474 Sodium:solute symporter family 34 438 1.6E-102 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_1653 09edd3d949627e2826278fae324f335f 511 Gene3D G3DSA:1.20.1730.10 22 506 9.5E-101 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Patl_1653 09edd3d949627e2826278fae324f335f 511 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 4 499 4.9E-213 T 11-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 Patl_1653 09edd3d949627e2826278fae324f335f 511 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 156 181 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site Patl_1113 57a964f5469e065240ed2306b7ba389d 339 SUPERFAMILY SSF46689 286 336 1.52E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1113 57a964f5469e065240ed2306b7ba389d 339 Gene3D G3DSA:1.10.10.60 230 337 7.5E-20 T 11-10-2018 Patl_1113 57a964f5469e065240ed2306b7ba389d 339 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 208 2.5E-31 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal Patl_1113 57a964f5469e065240ed2306b7ba389d 339 SMART SM00342 251 333 8.2E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_1113 57a964f5469e065240ed2306b7ba389d 339 Pfam PF12833 Helix-turn-helix domain 258 335 9.0E-14 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_2232 e817fddc2e51ba025e0ef2df548e7f92 338 Pfam PF00248 Aldo/keto reductase family 35 336 7.0E-68 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain Patl_2232 e817fddc2e51ba025e0ef2df548e7f92 338 Gene3D G3DSA:3.20.20.100 22 338 1.9E-111 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Patl_2232 e817fddc2e51ba025e0ef2df548e7f92 338 SUPERFAMILY SSF51430 20 336 1.83E-87 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Patl_1158 1c143a70389eeb64db95a80d48943f21 253 SUPERFAMILY SSF51658 5 246 2.76E-38 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily Patl_1158 1c143a70389eeb64db95a80d48943f21 253 Gene3D G3DSA:3.20.20.150 1 249 3.2E-62 T 11-10-2018 Patl_1158 1c143a70389eeb64db95a80d48943f21 253 Pfam PF01261 Xylose isomerase-like TIM barrel 20 184 4.3E-18 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Patl_3526 b53f1457b985473fd254d3083166f92f 106 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 24 103 1.4E-21 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Patl_3526 b53f1457b985473fd254d3083166f92f 106 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 103 15.479 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Patl_3526 b53f1457b985473fd254d3083166f92f 106 Pfam PF04999 Cell division protein FtsL 13 104 9.5E-30 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Patl_2205 9038bbd6c45a0c5317ee57ebcc2a2947 283 SUPERFAMILY SSF51569 7 276 4.67E-102 T 11-10-2018 Patl_2205 9038bbd6c45a0c5317ee57ebcc2a2947 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 14 275 49.077 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Patl_2205 9038bbd6c45a0c5317ee57ebcc2a2947 283 Gene3D G3DSA:3.20.20.70 4 280 4.4E-97 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2205 9038bbd6c45a0c5317ee57ebcc2a2947 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 19 273 3.0E-115 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Patl_2205 9038bbd6c45a0c5317ee57ebcc2a2947 283 Pfam PF00793 DAHP synthetase I family 11 271 7.2E-71 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Patl_4009 37e2dafe9fbd13ef62f7aa59e847c160 365 Pfam PF13439 Glycosyltransferase Family 4 15 170 3.7E-14 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Patl_4009 37e2dafe9fbd13ef62f7aa59e847c160 365 Gene3D G3DSA:3.40.50.2000 3 176 3.7E-13 T 11-10-2018 Patl_4009 37e2dafe9fbd13ef62f7aa59e847c160 365 Gene3D G3DSA:3.40.50.2000 177 347 3.1E-34 T 11-10-2018 Patl_4009 37e2dafe9fbd13ef62f7aa59e847c160 365 SUPERFAMILY SSF53756 4 364 1.37E-58 T 11-10-2018 Patl_4009 37e2dafe9fbd13ef62f7aa59e847c160 365 Pfam PF00534 Glycosyl transferases group 1 181 336 4.8E-25 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Patl_1438 e65aff890f739f5bac641f23f58cd96f 374 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Patl_1438 e65aff890f739f5bac641f23f58cd96f 374 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 158 9.4E-26 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_1438 e65aff890f739f5bac641f23f58cd96f 374 SUPERFAMILY SSF51735 165 339 2.56E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1438 e65aff890f739f5bac641f23f58cd96f 374 SUPERFAMILY SSF50129 323 374 2.26E-11 T 11-10-2018 IPR011032 GroES-like superfamily Patl_1438 e65aff890f739f5bac641f23f58cd96f 374 Gene3D G3DSA:3.90.180.10 11 369 4.1E-153 T 11-10-2018 Patl_1438 e65aff890f739f5bac641f23f58cd96f 374 Pfam PF00107 Zinc-binding dehydrogenase 202 329 3.1E-25 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_1438 e65aff890f739f5bac641f23f58cd96f 374 Gene3D G3DSA:3.40.50.720 179 317 4.1E-153 T 11-10-2018 Patl_1438 e65aff890f739f5bac641f23f58cd96f 374 SUPERFAMILY SSF50129 3 189 1.02E-73 T 11-10-2018 IPR011032 GroES-like superfamily Patl_1438 e65aff890f739f5bac641f23f58cd96f 374 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 7 374 3.2E-227 T 11-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 Patl_2482 d05eb7775a1a0d98910c9d61e4ee0b8b 488 SUPERFAMILY SSF48452 316 426 3.35E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2482 d05eb7775a1a0d98910c9d61e4ee0b8b 488 Gene3D G3DSA:3.30.2010.10 77 156 8.3E-8 T 11-10-2018 Patl_2482 d05eb7775a1a0d98910c9d61e4ee0b8b 488 Gene3D G3DSA:1.25.40.10 246 357 3.6E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2482 d05eb7775a1a0d98910c9d61e4ee0b8b 488 Pfam PF01435 Peptidase family M48 74 262 6.9E-29 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Patl_2482 d05eb7775a1a0d98910c9d61e4ee0b8b 488 Gene3D G3DSA:1.25.40.10 358 435 7.7E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2482 d05eb7775a1a0d98910c9d61e4ee0b8b 488 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 7 488 38.275 T 11-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 Patl_2362 5769a9652ee0f8c9de0f3e5d6c91f416 349 SUPERFAMILY SSF54631 179 320 4.88E-22 T 11-10-2018 Patl_2362 5769a9652ee0f8c9de0f3e5d6c91f416 349 Gene3D G3DSA:3.10.580.10 169 322 7.5E-34 T 11-10-2018 Patl_2362 5769a9652ee0f8c9de0f3e5d6c91f416 349 Pfam PF00571 CBS domain 260 311 9.3E-5 T 11-10-2018 IPR000644 CBS domain Patl_2362 5769a9652ee0f8c9de0f3e5d6c91f416 349 Pfam PF01595 Domain of unknown function DUF21 4 175 8.0E-31 T 11-10-2018 IPR002550 CNNM, transmembrane domain Patl_0119 92c2154d06d025942c6575acf8f742a6 425 SUPERFAMILY SSF103473 16 410 6.8E-40 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_0119 92c2154d06d025942c6575acf8f742a6 425 Pfam PF07690 Major Facilitator Superfamily 30 364 2.8E-20 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_0119 92c2154d06d025942c6575acf8f742a6 425 Gene3D G3DSA:1.20.1250.20 224 415 5.0E-61 T 11-10-2018 Patl_0119 92c2154d06d025942c6575acf8f742a6 425 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 103 405 4.5E-104 T 11-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 Patl_0119 92c2154d06d025942c6575acf8f742a6 425 Gene3D G3DSA:1.20.1250.20 17 223 3.7E-57 T 11-10-2018 Patl_4162 2bab93cb40b2c5666a9bc969165f6a67 633 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 66 393 3.1E-88 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Patl_4162 2bab93cb40b2c5666a9bc969165f6a67 633 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 305 322 - T 11-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 Patl_4162 2bab93cb40b2c5666a9bc969165f6a67 633 Gene3D G3DSA:3.20.20.300 28 413 5.9E-118 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Patl_4162 2bab93cb40b2c5666a9bc969165f6a67 633 SUPERFAMILY SSF51445 64 396 1.37E-82 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_4162 2bab93cb40b2c5666a9bc969165f6a67 633 Gene3D G3DSA:3.40.50.1700 421 632 7.7E-23 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Patl_1355 e0f769db0b9725c3864b5aa784930e0c 81 Gene3D G3DSA:1.20.58.660 11 81 1.4E-15 T 11-10-2018 Patl_1355 e0f769db0b9725c3864b5aa784930e0c 81 Pfam PF04325 Protein of unknown function (DUF465) 29 74 1.0E-10 T 11-10-2018 IPR007420 Protein of unknown function DUF465 Patl_2117 4db5917e549d89b70055ef658b6b3006 209 Hamap MF_00165 Thymidylate kinase [tmk]. 6 207 26.072 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Patl_2117 4db5917e549d89b70055ef658b6b3006 209 SUPERFAMILY SSF52540 4 206 3.6E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2117 4db5917e549d89b70055ef658b6b3006 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 4 199 9.1E-59 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Patl_2117 4db5917e549d89b70055ef658b6b3006 209 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 11-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Patl_2117 4db5917e549d89b70055ef658b6b3006 209 Pfam PF02223 Thymidylate kinase 10 199 1.3E-49 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Patl_2117 4db5917e549d89b70055ef658b6b3006 209 Gene3D G3DSA:3.40.50.300 5 208 3.0E-59 T 11-10-2018 Patl_1111 b5cc61610f885938bd7ee5657e13b7d1 327 SUPERFAMILY SSF143422 16 192 3.79E-19 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Patl_1111 b5cc61610f885938bd7ee5657e13b7d1 327 SMART SM01321 12 187 0.0018 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Patl_0162 f7110fb4192919645b80286e31f65324 142 SMART SM00344 7 108 3.5E-15 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Patl_0162 f7110fb4192919645b80286e31f65324 142 SUPERFAMILY SSF54909 66 140 9.33E-15 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_0162 f7110fb4192919645b80286e31f65324 142 Gene3D G3DSA:3.30.70.920 61 142 3.4E-17 T 11-10-2018 Patl_0162 f7110fb4192919645b80286e31f65324 142 SUPERFAMILY SSF46785 3 55 3.33E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0162 f7110fb4192919645b80286e31f65324 142 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 49 2.0E-11 T 11-10-2018 Patl_0162 f7110fb4192919645b80286e31f65324 142 Pfam PF01037 Lrp/AsnC ligand binding domain 68 138 2.9E-17 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Patl_0162 f7110fb4192919645b80286e31f65324 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 4.2E-9 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_0162 f7110fb4192919645b80286e31f65324 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 4.2E-9 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_0162 f7110fb4192919645b80286e31f65324 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 4.2E-9 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_0162 f7110fb4192919645b80286e31f65324 142 Gene3D G3DSA:1.10.10.10 5 54 2.2E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1049 4ae3674a49e3ca12f3de522752cd9b8e 562 Pfam PF03571 Peptidase family M49 184 391 4.4E-14 T 11-10-2018 IPR039461 Peptidase family M49 Patl_0112 adf41d6caac619a6adec2c6b17cb54a5 650 SUPERFAMILY SSF52540 2 244 7.65E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0112 adf41d6caac619a6adec2c6b17cb54a5 650 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_0112 adf41d6caac619a6adec2c6b17cb54a5 650 SUPERFAMILY SSF52540 296 514 1.26E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0112 adf41d6caac619a6adec2c6b17cb54a5 650 Pfam PF12848 ABC transporter 218 292 1.2E-26 T 11-10-2018 IPR032781 ABC-transporter extension domain Patl_0112 adf41d6caac619a6adec2c6b17cb54a5 650 SMART SM00382 26 228 1.3E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0112 adf41d6caac619a6adec2c6b17cb54a5 650 SMART SM00382 337 503 1.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0112 adf41d6caac619a6adec2c6b17cb54a5 650 Pfam PF00005 ABC transporter 18 178 6.2E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_0112 adf41d6caac619a6adec2c6b17cb54a5 650 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_0112 adf41d6caac619a6adec2c6b17cb54a5 650 Pfam PF00005 ABC transporter 328 459 9.3E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_0112 adf41d6caac619a6adec2c6b17cb54a5 650 Gene3D G3DSA:3.40.50.300 275 539 4.9E-51 T 11-10-2018 Patl_0112 adf41d6caac619a6adec2c6b17cb54a5 650 Gene3D G3DSA:3.40.50.300 1 259 4.2E-54 T 11-10-2018 Patl_3610 d644e32daf627f5d5fb9e4eccdf241d0 363 Pfam PF01551 Peptidase family M23 264 357 2.3E-25 T 11-10-2018 IPR016047 Peptidase M23 Patl_3610 d644e32daf627f5d5fb9e4eccdf241d0 363 SUPERFAMILY SSF51261 144 361 4.24E-44 T 11-10-2018 IPR011055 Duplicated hybrid motif Patl_3610 d644e32daf627f5d5fb9e4eccdf241d0 363 Gene3D G3DSA:2.70.70.10 226 362 3.1E-33 T 11-10-2018 IPR011055 Duplicated hybrid motif Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 SUPERFAMILY SSF51621 433 723 7.59E-95 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 SUPERFAMILY SSF55781 2 159 8.94E-28 T 11-10-2018 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 SUPERFAMILY SSF52009 300 422 3.01E-29 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 644 659 1.8E-23 T 11-10-2018 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 627 642 1.8E-23 T 11-10-2018 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 470 489 1.8E-23 T 11-10-2018 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 680 692 1.8E-23 T 11-10-2018 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 627 645 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 Gene3D G3DSA:3.30.450.40 1 164 2.1E-47 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 Gene3D G3DSA:3.20.20.60 410 752 5.4E-103 T 11-10-2018 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 SUPERFAMILY SSF47831 207 318 1.14E-25 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 Pfam PF05524 PEP-utilising enzyme, N-terminal 179 301 1.1E-18 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 Pfam PF00391 PEP-utilising enzyme, mobile domain 329 402 2.1E-19 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 Pfam PF01590 GAF domain 18 154 1.6E-18 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 SMART SM00065 17 164 2.5E-20 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 Gene3D G3DSA:1.10.274.10 197 321 4.0E-56 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 188 745 1.4E-129 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 Gene3D G3DSA:3.50.30.10 180 409 4.0E-56 T 11-10-2018 Patl_3845 548accab4ccaea79f8e7a5cf7f828db4 762 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 433 721 7.4E-93 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Patl_2558 9503afa5a7b0ad5eb831a2e5cdaaefaa 426 Gene3D G3DSA:3.40.640.10 64 334 2.0E-166 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_2558 9503afa5a7b0ad5eb831a2e5cdaaefaa 426 Pfam PF00202 Aminotransferase class-III 30 425 3.4E-130 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Patl_2558 9503afa5a7b0ad5eb831a2e5cdaaefaa 426 SUPERFAMILY SSF53383 9 425 1.85E-132 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_2558 9503afa5a7b0ad5eb831a2e5cdaaefaa 426 Gene3D G3DSA:3.90.1150.10 13 419 2.0E-166 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_2558 9503afa5a7b0ad5eb831a2e5cdaaefaa 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 246 283 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Patl_2558 9503afa5a7b0ad5eb831a2e5cdaaefaa 426 PIRSF PIRSF000521 132 426 8.9E-24 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Patl_2558 9503afa5a7b0ad5eb831a2e5cdaaefaa 426 PIRSF PIRSF000521 21 147 7.6E-8 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Patl_2558 9503afa5a7b0ad5eb831a2e5cdaaefaa 426 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 4 426 48.484 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 Patl_2558 9503afa5a7b0ad5eb831a2e5cdaaefaa 426 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 16 425 9.0E-184 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 Patl_2560 c1776f68bf93c85a84e40b0657c977d8 125 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 121 1.1E-40 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB Patl_2560 c1776f68bf93c85a84e40b0657c977d8 125 PIRSF PIRSF005610 1 119 5.6E-21 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB Patl_3422 862af245d8e94e34c7a90cb119349958 133 Pfam PF04379 ApaG domain 26 110 4.7E-33 T 11-10-2018 IPR007474 ApaG domain Patl_3422 862af245d8e94e34c7a90cb119349958 133 Hamap MF_00791 Protein ApaG [apaG]. 8 133 29.043 T 11-10-2018 IPR023065 Uncharacterised protein family ApaG Patl_3422 862af245d8e94e34c7a90cb119349958 133 Gene3D G3DSA:2.60.40.1470 9 133 1.7E-44 T 11-10-2018 IPR036767 ApaG domain superfamily Patl_3422 862af245d8e94e34c7a90cb119349958 133 SUPERFAMILY SSF110069 11 133 5.1E-46 T 11-10-2018 IPR036767 ApaG domain superfamily Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 Gene3D G3DSA:3.40.50.140 1 156 6.4E-56 T 11-10-2018 Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 Gene3D G3DSA:1.10.290.10 292 421 1.9E-164 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 Gene3D G3DSA:1.10.460.10 162 612 1.9E-164 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 644 55.232 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 320 335 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 1.2E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 326 335 1.2E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 531 545 1.2E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 407 423 1.2E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 1.2E-23 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 SMART SM00436 128 223 1.5E-28 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 TIGRFAM TIGR01056 topB: DNA topoisomerase III 2 643 5.4E-227 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 Gene3D G3DSA:2.70.20.10 217 498 1.9E-164 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 Pfam PF01131 DNA topoisomerase 157 603 9.0E-114 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 SMART SM00437 283 568 1.5E-79 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 Pfam PF01751 Toprim domain 3 134 1.1E-15 T 11-10-2018 IPR006171 TOPRIM domain Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 SUPERFAMILY SSF56712 1 614 2.09E-177 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Patl_0776 c7a8bcacea1856b31ec4a42245d203bc 645 SMART SM00493 1 124 3.1E-22 T 11-10-2018 IPR006171 TOPRIM domain Patl_1630 c71893ee3fd2274e894e7c589ebfb67c 223 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1630 c71893ee3fd2274e894e7c589ebfb67c 223 Gene3D G3DSA:3.30.2350.10 8 222 1.2E-65 T 11-10-2018 Patl_1630 c71893ee3fd2274e894e7c589ebfb67c 223 Pfam PF00849 RNA pseudouridylate synthase 26 172 8.9E-26 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1630 c71893ee3fd2274e894e7c589ebfb67c 223 SUPERFAMILY SSF55120 18 223 4.16E-58 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_0579 3c88649ca5bbd7e4754abe94a8aeb9a6 191 Pfam PF08279 HTH domain 29 83 1.7E-4 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 Patl_0579 3c88649ca5bbd7e4754abe94a8aeb9a6 191 Gene3D G3DSA:1.10.10.10 4 85 3.2E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0579 3c88649ca5bbd7e4754abe94a8aeb9a6 191 SUPERFAMILY SSF46785 2 145 1.27E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0579 3c88649ca5bbd7e4754abe94a8aeb9a6 191 PIRSF PIRSF006707 1 175 1.9E-49 T 11-10-2018 IPR026282 DNA-binding protein, MJ1563 type Patl_0846 fd946870327a1dfe3ec28d620181c5bc 303 Gene3D G3DSA:3.40.190.10 90 292 1.4E-40 T 11-10-2018 Patl_0846 fd946870327a1dfe3ec28d620181c5bc 303 Gene3D G3DSA:3.40.190.10 170 267 1.4E-40 T 11-10-2018 Patl_0846 fd946870327a1dfe3ec28d620181c5bc 303 SUPERFAMILY SSF46785 4 82 6.16E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0846 fd946870327a1dfe3ec28d620181c5bc 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0846 fd946870327a1dfe3ec28d620181c5bc 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0846 fd946870327a1dfe3ec28d620181c5bc 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.3E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0846 fd946870327a1dfe3ec28d620181c5bc 303 Gene3D G3DSA:1.10.10.10 1 87 3.1E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0846 fd946870327a1dfe3ec28d620181c5bc 303 SUPERFAMILY SSF53850 90 294 1.99E-27 T 11-10-2018 Patl_0846 fd946870327a1dfe3ec28d620181c5bc 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 6.1E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2895 af2ccdfef2053617b8ff22da0e7792e2 200 SMART SM00493 81 166 2.1E-15 T 11-10-2018 IPR006171 TOPRIM domain Patl_2895 af2ccdfef2053617b8ff22da0e7792e2 200 Pfam PF02132 RecR protein 40 77 2.3E-15 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger Patl_2895 af2ccdfef2053617b8ff22da0e7792e2 200 Pfam PF13662 Toprim domain 82 172 2.5E-23 T 11-10-2018 IPR006171 TOPRIM domain Patl_2895 af2ccdfef2053617b8ff22da0e7792e2 200 Gene3D G3DSA:3.40.1360.10 78 199 1.6E-41 T 11-10-2018 Patl_2895 af2ccdfef2053617b8ff22da0e7792e2 200 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 9.1E-77 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Patl_2895 af2ccdfef2053617b8ff22da0e7792e2 200 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 99.171 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Patl_2895 af2ccdfef2053617b8ff22da0e7792e2 200 SUPERFAMILY SSF111304 3 199 3.66E-72 T 11-10-2018 IPR023627 Recombination protein RecR Patl_2895 af2ccdfef2053617b8ff22da0e7792e2 200 Gene3D G3DSA:1.10.8.420 1 52 9.1E-18 T 11-10-2018 Patl_2895 af2ccdfef2053617b8ff22da0e7792e2 200 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 Patl_4187 eed4f5f4e70d44ccbe45a2df2a53b3fb 415 Pfam PF03949 Malic enzyme, NAD binding domain 164 357 1.8E-24 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Patl_4187 eed4f5f4e70d44ccbe45a2df2a53b3fb 415 Pfam PF00390 Malic enzyme, N-terminal domain 21 115 3.2E-20 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Patl_4187 eed4f5f4e70d44ccbe45a2df2a53b3fb 415 SUPERFAMILY SSF51735 162 407 1.36E-82 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_4187 eed4f5f4e70d44ccbe45a2df2a53b3fb 415 ProSitePatterns PS00331 Malic enzymes signature. 158 174 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 Patl_4187 eed4f5f4e70d44ccbe45a2df2a53b3fb 415 Gene3D G3DSA:3.40.50.10380 1 159 3.6E-66 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Patl_4187 eed4f5f4e70d44ccbe45a2df2a53b3fb 415 SMART SM00919 162 398 1.5E-143 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Patl_4187 eed4f5f4e70d44ccbe45a2df2a53b3fb 415 Gene3D G3DSA:3.40.50.720 160 410 1.0E-83 T 11-10-2018 Patl_4187 eed4f5f4e70d44ccbe45a2df2a53b3fb 415 SUPERFAMILY SSF53223 9 160 7.91E-51 T 11-10-2018 Patl_4187 eed4f5f4e70d44ccbe45a2df2a53b3fb 415 PIRSF PIRSF000106 44 414 1.0E-70 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Patl_4187 eed4f5f4e70d44ccbe45a2df2a53b3fb 415 SMART SM01274 17 150 1.6E-71 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Patl_1797 0bbac8ee1d937c2ef4979b26977777f7 589 PIRSF PIRSF000171 1 581 3.1E-49 T 11-10-2018 Patl_1797 0bbac8ee1d937c2ef4979b26977777f7 589 SUPERFAMILY SSF46977 453 589 1.16E-43 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1797 0bbac8ee1d937c2ef4979b26977777f7 589 Pfam PF00890 FAD binding domain 9 405 5.8E-120 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1797 0bbac8ee1d937c2ef4979b26977777f7 589 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1797 0bbac8ee1d937c2ef4979b26977777f7 589 SUPERFAMILY SSF51905 4 427 5.49E-75 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1797 0bbac8ee1d937c2ef4979b26977777f7 589 Gene3D G3DSA:3.50.50.60 9 416 6.0E-171 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1797 0bbac8ee1d937c2ef4979b26977777f7 589 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 589 1.4E-270 T 11-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1797 0bbac8ee1d937c2ef4979b26977777f7 589 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 589 1.7E-236 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1797 0bbac8ee1d937c2ef4979b26977777f7 589 Pfam PF02910 Fumarate reductase flavoprotein C-term 462 589 3.4E-33 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1797 0bbac8ee1d937c2ef4979b26977777f7 589 Gene3D G3DSA:3.90.700.10 246 350 6.0E-171 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1797 0bbac8ee1d937c2ef4979b26977777f7 589 SUPERFAMILY SSF56425 236 356 2.09E-42 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1797 0bbac8ee1d937c2ef4979b26977777f7 589 Gene3D G3DSA:4.10.80.40 549 589 6.3E-22 T 11-10-2018 Patl_1797 0bbac8ee1d937c2ef4979b26977777f7 589 Gene3D G3DSA:1.20.58.100 430 548 4.6E-36 T 11-10-2018 Patl_0029 890c2463854a22af59195e358c59d593 307 PRINTS PR00073 Coprogen oxidase signature 51 72 3.7E-84 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Patl_0029 890c2463854a22af59195e358c59d593 307 PRINTS PR00073 Coprogen oxidase signature 34 50 3.7E-84 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Patl_0029 890c2463854a22af59195e358c59d593 307 PRINTS PR00073 Coprogen oxidase signature 128 150 3.7E-84 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Patl_0029 890c2463854a22af59195e358c59d593 307 PRINTS PR00073 Coprogen oxidase signature 165 194 3.7E-84 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Patl_0029 890c2463854a22af59195e358c59d593 307 PRINTS PR00073 Coprogen oxidase signature 265 291 3.7E-84 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Patl_0029 890c2463854a22af59195e358c59d593 307 PRINTS PR00073 Coprogen oxidase signature 237 264 3.7E-84 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Patl_0029 890c2463854a22af59195e358c59d593 307 PRINTS PR00073 Coprogen oxidase signature 93 117 3.7E-84 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Patl_0029 890c2463854a22af59195e358c59d593 307 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 169 193 - T 11-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Patl_0029 890c2463854a22af59195e358c59d593 307 SUPERFAMILY SSF102886 9 305 5.36E-139 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Patl_0029 890c2463854a22af59195e358c59d593 307 Pfam PF01218 Coproporphyrinogen III oxidase 12 305 9.1E-135 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Patl_0029 890c2463854a22af59195e358c59d593 307 Gene3D G3DSA:3.40.1500.10 2 305 5.5E-140 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Patl_0029 890c2463854a22af59195e358c59d593 307 PIRSF PIRSF000166 3 306 1.3E-128 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Patl_0029 890c2463854a22af59195e358c59d593 307 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 6 280 56.322 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 Patl_1862 d567d808370ccc1919c6d11dd512b17f 773 Gene3D G3DSA:2.170.130.10 30 160 1.0E-9 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_1862 d567d808370ccc1919c6d11dd512b17f 773 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 157 4.7E-11 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1862 d567d808370ccc1919c6d11dd512b17f 773 SUPERFAMILY SSF56935 21 773 2.04E-93 T 11-10-2018 Patl_1862 d567d808370ccc1919c6d11dd512b17f 773 Pfam PF00593 TonB dependent receptor 248 771 1.6E-42 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3146 a766d3efc4b1a40d9db9bb5faddb9c0f 256 PIRSF PIRSF005902 1 253 2.3E-68 T 11-10-2018 IPR001130 TatD family GO:0016788 Patl_3146 a766d3efc4b1a40d9db9bb5faddb9c0f 256 SUPERFAMILY SSF51556 2 251 1.25E-73 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_3146 a766d3efc4b1a40d9db9bb5faddb9c0f 256 Gene3D G3DSA:3.20.20.140 1 252 1.8E-83 T 11-10-2018 Patl_3146 a766d3efc4b1a40d9db9bb5faddb9c0f 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 1 9 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Patl_3146 a766d3efc4b1a40d9db9bb5faddb9c0f 256 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Patl_3146 a766d3efc4b1a40d9db9bb5faddb9c0f 256 Pfam PF01026 TatD related DNase 2 250 1.0E-64 T 11-10-2018 IPR001130 TatD family GO:0016788 Patl_3171 06bc971093ed38fc30a11ee8c9cbe585 1364 SUPERFAMILY SSF50998 862 1120 9.55E-11 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Patl_3171 06bc971093ed38fc30a11ee8c9cbe585 1364 Gene3D G3DSA:3.40.50.410 44 182 8.4E-7 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Patl_3171 06bc971093ed38fc30a11ee8c9cbe585 1364 Pfam PF05567 Neisseria PilC beta-propeller domain 876 1091 1.3E-18 T 11-10-2018 IPR008707 PilC beta-propeller domain Patl_3171 06bc971093ed38fc30a11ee8c9cbe585 1364 SUPERFAMILY SSF53300 45 689 5.42E-5 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 Gene3D G3DSA:1.20.210.10 19 565 1.3E-188 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 SUPERFAMILY SSF81442 46 561 4.19E-178 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 49 74 1.9E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 200 218 1.9E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 229 248 1.9E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 350 371 1.9E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 413 432 1.9E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 99 122 1.9E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 403 1.9E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 126 150 1.9E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 168 180 1.9E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 280 301 1.9E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 326 341 1.9E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 PRINTS PR01165 Cytochrome c oxidase subunit I signature 463 484 1.9E-95 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 4 649 0.0 T 11-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 58 506 3.2E-134 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1291 3d29cb36d620db8c8294c0d89ec6727f 664 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 282 336 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_3790 de523fd3dd38a2fb771cb2de02cb857d 145 Pfam PF07361 Cytochrome b562 38 133 1.8E-19 T 11-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 Patl_3790 de523fd3dd38a2fb771cb2de02cb857d 145 SUPERFAMILY SSF47175 38 133 2.47E-10 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 Patl_0590 fba13e475b1e3e244b6dce0f58c1521e 206 Pfam PF03737 Aldolase/RraA 23 159 1.6E-38 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Patl_0590 fba13e475b1e3e244b6dce0f58c1521e 206 Gene3D G3DSA:3.50.30.100 9 181 2.4E-48 T 11-10-2018 Patl_0590 fba13e475b1e3e244b6dce0f58c1521e 206 SUPERFAMILY SSF89562 9 169 6.54E-42 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Patl_3932 5c4d897008fd6eedf8369cf91812d8c3 283 SUPERFAMILY SSF52374 1 280 2.57E-106 T 11-10-2018 Patl_3932 5c4d897008fd6eedf8369cf91812d8c3 283 Gene3D G3DSA:3.30.1300.10 180 283 6.2E-33 T 11-10-2018 Patl_3932 5c4d897008fd6eedf8369cf91812d8c3 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.826 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Patl_3932 5c4d897008fd6eedf8369cf91812d8c3 283 Gene3D G3DSA:3.40.50.620 1 179 4.8E-76 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_3932 5c4d897008fd6eedf8369cf91812d8c3 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.1E-102 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Patl_3932 5c4d897008fd6eedf8369cf91812d8c3 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 67 8.8E-10 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Patl_3932 5c4d897008fd6eedf8369cf91812d8c3 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 1.1E-107 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Patl_3369 2c06f655462ccccfb9ba4d1d06d57bd0 357 SUPERFAMILY SSF55874 202 352 8.12E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3369 2c06f655462ccccfb9ba4d1d06d57bd0 357 SMART SM00387 252 356 4.6E-4 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3369 2c06f655462ccccfb9ba4d1d06d57bd0 357 Gene3D G3DSA:3.30.565.10 205 351 3.3E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3369 2c06f655462ccccfb9ba4d1d06d57bd0 357 Gene3D G3DSA:1.10.287.130 149 203 3.3E-14 T 11-10-2018 Patl_3369 2c06f655462ccccfb9ba4d1d06d57bd0 357 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 256 352 2.9E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1774 f00295e966c4cc029acaf11ef3bf5827 1164 Gene3D G3DSA:3.40.50.300 910 1163 2.0E-43 T 11-10-2018 Patl_1774 f00295e966c4cc029acaf11ef3bf5827 1164 Gene3D G3DSA:3.40.50.300 1 242 3.2E-55 T 11-10-2018 Patl_1774 f00295e966c4cc029acaf11ef3bf5827 1164 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1157 22.286 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Patl_1774 f00295e966c4cc029acaf11ef3bf5827 1164 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1155 0.0 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Patl_1774 f00295e966c4cc029acaf11ef3bf5827 1164 SUPERFAMILY SSF52540 1 402 2.5E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1774 f00295e966c4cc029acaf11ef3bf5827 1164 PIRSF PIRSF005719 1 1164 3.5E-244 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein Patl_1774 f00295e966c4cc029acaf11ef3bf5827 1164 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1148 3.9E-60 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Patl_1774 f00295e966c4cc029acaf11ef3bf5827 1164 SUPERFAMILY SSF52540 1 1158 2.2E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1553 1881097c3837e77891e2f99b89aefe3d 320 SMART SM00729 83 292 6.3E-18 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Patl_1553 1881097c3837e77891e2f99b89aefe3d 320 Gene3D G3DSA:3.20.20.70 76 291 2.5E-24 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_1553 1881097c3837e77891e2f99b89aefe3d 320 Hamap MF_00206 Lipoyl synthase [lipA]. 1 320 152.619 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Patl_1553 1881097c3837e77891e2f99b89aefe3d 320 SUPERFAMILY SSF102114 51 313 6.15E-68 T 11-10-2018 Patl_1553 1881097c3837e77891e2f99b89aefe3d 320 PIRSF PIRSF005963 1 320 1.0E-130 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Patl_1553 1881097c3837e77891e2f99b89aefe3d 320 Pfam PF04055 Radical SAM superfamily 90 250 4.6E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Patl_1553 1881097c3837e77891e2f99b89aefe3d 320 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 28 72 1.6E-8 T 11-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Patl_1553 1881097c3837e77891e2f99b89aefe3d 320 TIGRFAM TIGR00510 lipA: lipoyl synthase 24 319 1.5E-142 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Patl_2223 7e835a2a48845a0ad573ca8b5dbb9ee3 486 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 359 379 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Patl_2223 7e835a2a48845a0ad573ca8b5dbb9ee3 486 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 23 440 1.5E-106 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 Patl_2223 7e835a2a48845a0ad573ca8b5dbb9ee3 486 Pfam PF00860 Permease family 25 411 1.1E-86 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Patl_2602 4b7ed1e89a110ae2b0dcd0f8b06c0d39 749 SUPERFAMILY SSF56003 344 742 1.09E-99 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Patl_2602 4b7ed1e89a110ae2b0dcd0f8b06c0d39 749 PIRSF PIRSF036389 1 749 3.9E-219 T 11-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related Patl_2602 4b7ed1e89a110ae2b0dcd0f8b06c0d39 749 Gene3D G3DSA:3.30.365.10 136 210 1.7E-6 T 11-10-2018 Patl_2602 4b7ed1e89a110ae2b0dcd0f8b06c0d39 749 Gene3D G3DSA:3.30.365.10 52 106 8.2E-8 T 11-10-2018 Patl_2602 4b7ed1e89a110ae2b0dcd0f8b06c0d39 749 SMART SM01008 240 319 2.1E-10 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Patl_2602 4b7ed1e89a110ae2b0dcd0f8b06c0d39 749 Gene3D G3DSA:3.30.365.10 373 465 2.7E-57 T 11-10-2018 Patl_2602 4b7ed1e89a110ae2b0dcd0f8b06c0d39 749 Gene3D G3DSA:3.30.365.10 595 746 1.8E-27 T 11-10-2018 Patl_2602 4b7ed1e89a110ae2b0dcd0f8b06c0d39 749 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 345 577 1.5E-35 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Patl_2602 4b7ed1e89a110ae2b0dcd0f8b06c0d39 749 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 53 97 1.0E-5 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Patl_2602 4b7ed1e89a110ae2b0dcd0f8b06c0d39 749 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 613 697 2.6E-6 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Patl_2602 4b7ed1e89a110ae2b0dcd0f8b06c0d39 749 Gene3D G3DSA:3.90.1170.50 211 298 4.3E-8 T 11-10-2018 Patl_2602 4b7ed1e89a110ae2b0dcd0f8b06c0d39 749 Gene3D G3DSA:3.30.365.10 348 577 2.7E-57 T 11-10-2018 Patl_2602 4b7ed1e89a110ae2b0dcd0f8b06c0d39 749 SUPERFAMILY SSF56003 7 271 2.13E-28 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Patl_3541 ab5466ba8c7aa1fe4b3ff5e0010b0f7f 1009 SUPERFAMILY SSF55781 427 574 6.45E-6 T 11-10-2018 Patl_3541 ab5466ba8c7aa1fe4b3ff5e0010b0f7f 1009 Gene3D G3DSA:1.10.8.60 765 841 9.4E-23 T 11-10-2018 Patl_3541 ab5466ba8c7aa1fe4b3ff5e0010b0f7f 1009 Gene3D G3DSA:3.30.450.40 434 579 5.5E-5 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_3541 ab5466ba8c7aa1fe4b3ff5e0010b0f7f 1009 SMART SM00267 245 399 2.4E-11 T 11-10-2018 IPR000160 GGDEF domain Patl_3541 ab5466ba8c7aa1fe4b3ff5e0010b0f7f 1009 SMART SM00382 612 755 3.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3541 ab5466ba8c7aa1fe4b3ff5e0010b0f7f 1009 SUPERFAMILY SSF52540 594 833 2.89E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3541 ab5466ba8c7aa1fe4b3ff5e0010b0f7f 1009 Gene3D G3DSA:3.30.70.270 241 407 7.7E-27 T 11-10-2018 Patl_3541 ab5466ba8c7aa1fe4b3ff5e0010b0f7f 1009 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 393 2.6E-20 T 11-10-2018 IPR000160 GGDEF domain Patl_3541 ab5466ba8c7aa1fe4b3ff5e0010b0f7f 1009 SUPERFAMILY SSF55073 251 399 3.45E-22 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3541 ab5466ba8c7aa1fe4b3ff5e0010b0f7f 1009 Pfam PF00158 Sigma-54 interaction domain 594 758 3.7E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Patl_3541 ab5466ba8c7aa1fe4b3ff5e0010b0f7f 1009 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 805 814 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Patl_3541 ab5466ba8c7aa1fe4b3ff5e0010b0f7f 1009 Gene3D G3DSA:3.40.50.300 580 763 1.2E-63 T 11-10-2018 Patl_3541 ab5466ba8c7aa1fe4b3ff5e0010b0f7f 1009 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 678 693 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Patl_3541 ab5466ba8c7aa1fe4b3ff5e0010b0f7f 1009 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 616 629 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Patl_3541 ab5466ba8c7aa1fe4b3ff5e0010b0f7f 1009 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 395 5.5E-18 T 11-10-2018 IPR000160 GGDEF domain Patl_1582 48fc5c7d93e5e1e36783f09561f244d5 151 Gene3D G3DSA:1.10.1660.10 1 130 1.4E-29 T 11-10-2018 Patl_1582 48fc5c7d93e5e1e36783f09561f244d5 151 SUPERFAMILY SSF46955 8 129 1.61E-24 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Patl_1582 48fc5c7d93e5e1e36783f09561f244d5 151 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 7 145 1.8E-48 T 11-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 Patl_1582 48fc5c7d93e5e1e36783f09561f244d5 151 SMART SM00422 7 75 2.5E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_1582 48fc5c7d93e5e1e36783f09561f244d5 151 Pfam PF09278 MerR, DNA binding 49 114 2.0E-17 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding Patl_1582 48fc5c7d93e5e1e36783f09561f244d5 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 19 32 1.2E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_1582 48fc5c7d93e5e1e36783f09561f244d5 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 8 19 1.2E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_1582 48fc5c7d93e5e1e36783f09561f244d5 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 42 62 1.2E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2525 b60ef537a6d43dbd49a1311ff465e2f1 850 Gene3D G3DSA:2.140.10.30 65 244 1.4E-5 T 11-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily Patl_2525 b60ef537a6d43dbd49a1311ff465e2f1 850 Gene3D G3DSA:2.140.10.30 373 585 2.2E-25 T 11-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily Patl_2525 b60ef537a6d43dbd49a1311ff465e2f1 850 SUPERFAMILY SSF82171 66 575 1.96E-34 T 11-10-2018 Patl_2525 b60ef537a6d43dbd49a1311ff465e2f1 850 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 400 561 9.7E-20 T 11-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 Patl_2525 b60ef537a6d43dbd49a1311ff465e2f1 850 SUPERFAMILY SSF53474 605 849 3.06E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2525 b60ef537a6d43dbd49a1311ff465e2f1 850 Pfam PF00326 Prolyl oligopeptidase family 656 848 4.7E-42 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Patl_2525 b60ef537a6d43dbd49a1311ff465e2f1 850 Gene3D G3DSA:3.40.50.1820 597 850 1.6E-56 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0757 aecf4761c0494feaeabdec070f2f0f05 479 Pfam PF00924 Mechanosensitive ion channel 248 455 3.0E-49 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Patl_0757 aecf4761c0494feaeabdec070f2f0f05 479 SUPERFAMILY SSF82689 360 466 8.11E-23 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Patl_0757 aecf4761c0494feaeabdec070f2f0f05 479 SUPERFAMILY SSF50182 291 357 1.31E-15 T 11-10-2018 IPR010920 LSM domain superfamily Patl_0757 aecf4761c0494feaeabdec070f2f0f05 479 Gene3D G3DSA:2.30.30.60 307 356 1.2E-12 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Patl_0757 aecf4761c0494feaeabdec070f2f0f05 479 SUPERFAMILY SSF82861 207 289 1.22E-11 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Patl_0757 aecf4761c0494feaeabdec070f2f0f05 479 Gene3D G3DSA:3.30.70.100 358 459 1.5E-18 T 11-10-2018 Patl_3814 48e9a8d3d52e68579e283d8647a90375 1293 Pfam PF02538 Hydantoinase B/oxoprolinase 747 1252 2.5E-190 T 11-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Patl_3814 48e9a8d3d52e68579e283d8647a90375 1293 Pfam PF01968 Hydantoinase/oxoprolinase 227 541 1.4E-110 T 11-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Patl_3814 48e9a8d3d52e68579e283d8647a90375 1293 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 29 208 2.0E-59 T 11-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Patl_0887 b1f1fa316dfc899a7dc7f2190847190b 1236 SUPERFAMILY SSF56935 49 1236 2.53E-71 T 11-10-2018 Patl_0887 b1f1fa316dfc899a7dc7f2190847190b 1236 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 48 1236 6.2E-151 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor Patl_0887 b1f1fa316dfc899a7dc7f2190847190b 1236 Pfam PF00593 TonB dependent receptor 540 1233 3.7E-30 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0887 b1f1fa316dfc899a7dc7f2190847190b 1236 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 177 6.1E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0887 b1f1fa316dfc899a7dc7f2190847190b 1236 Gene3D G3DSA:2.170.130.10 38 184 3.0E-13 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_0887 b1f1fa316dfc899a7dc7f2190847190b 1236 Gene3D G3DSA:2.40.170.20 846 1236 6.3E-39 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_3629 b135bdf9bdab0ecd5fca68c5038ec2e2 129 SUPERFAMILY SSF52172 3 125 4.7E-26 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3629 b135bdf9bdab0ecd5fca68c5038ec2e2 129 Pfam PF00072 Response regulator receiver domain 6 119 1.3E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3629 b135bdf9bdab0ecd5fca68c5038ec2e2 129 SMART SM00448 4 119 1.9E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3629 b135bdf9bdab0ecd5fca68c5038ec2e2 129 Gene3D G3DSA:3.40.50.2300 3 127 1.5E-24 T 11-10-2018 Patl_3052 253bc8a0af6686f6dd36bda6c2406cae 267 Gene3D G3DSA:2.170.280.10 164 173 1.0E-25 T 11-10-2018 Patl_3052 253bc8a0af6686f6dd36bda6c2406cae 267 Pfam PF00700 Bacterial flagellin C-terminal helical region 182 265 1.1E-17 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Patl_3052 253bc8a0af6686f6dd36bda6c2406cae 267 Gene3D G3DSA:1.20.58.1830 231 265 1.0E-25 T 11-10-2018 Patl_3052 253bc8a0af6686f6dd36bda6c2406cae 267 Gene3D G3DSA:1.20.58.1830 10 28 4.3E-43 T 11-10-2018 Patl_3052 253bc8a0af6686f6dd36bda6c2406cae 267 PRINTS PR00207 Flagellin signature 71 90 8.0E-15 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Patl_3052 253bc8a0af6686f6dd36bda6c2406cae 267 PRINTS PR00207 Flagellin signature 106 129 8.0E-15 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Patl_3052 253bc8a0af6686f6dd36bda6c2406cae 267 PRINTS PR00207 Flagellin signature 32 49 8.0E-15 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Patl_3052 253bc8a0af6686f6dd36bda6c2406cae 267 Pfam PF00669 Bacterial flagellin N-terminal helical region 8 135 7.2E-23 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Patl_3052 253bc8a0af6686f6dd36bda6c2406cae 267 SUPERFAMILY SSF64518 4 265 5.49E-64 T 11-10-2018 Patl_3052 253bc8a0af6686f6dd36bda6c2406cae 267 Gene3D G3DSA:1.20.1330.10 174 225 1.0E-25 T 11-10-2018 Patl_3052 253bc8a0af6686f6dd36bda6c2406cae 267 Gene3D G3DSA:1.20.1330.10 40 161 4.3E-43 T 11-10-2018 Patl_4268 4869f3ea7fb7ebddc8a713d497dde765 416 Gene3D G3DSA:3.40.605.10 17 410 1.4E-153 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_4268 4869f3ea7fb7ebddc8a713d497dde765 416 Gene3D G3DSA:3.40.309.10 225 373 1.4E-153 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Patl_4268 4869f3ea7fb7ebddc8a713d497dde765 416 PIRSF PIRSF000151 1 416 2.7E-164 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Patl_4268 4869f3ea7fb7ebddc8a713d497dde765 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Patl_4268 4869f3ea7fb7ebddc8a713d497dde765 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 4 415 39.046 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Patl_4268 4869f3ea7fb7ebddc8a713d497dde765 416 Pfam PF00171 Aldehyde dehydrogenase family 5 285 1.0E-16 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Patl_4268 4869f3ea7fb7ebddc8a713d497dde765 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 12 405 1.3E-134 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Patl_4268 4869f3ea7fb7ebddc8a713d497dde765 416 SUPERFAMILY SSF53720 5 415 5.24E-111 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_3823 2a026e7b3aec945ce88e088d3227e6d1 531 SUPERFAMILY SSF49899 369 520 1.42E-19 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Patl_3823 2a026e7b3aec945ce88e088d3227e6d1 531 Gene3D G3DSA:2.115.10.20 37 372 1.6E-120 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Patl_3823 2a026e7b3aec945ce88e088d3227e6d1 531 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 46 358 1.9E-91 T 11-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal Patl_3823 2a026e7b3aec945ce88e088d3227e6d1 531 SMART SM00640 46 490 4.2E-132 T 11-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 Patl_3823 2a026e7b3aec945ce88e088d3227e6d1 531 Gene3D G3DSA:2.60.120.560 374 530 4.1E-22 T 11-10-2018 Patl_3823 2a026e7b3aec945ce88e088d3227e6d1 531 SUPERFAMILY SSF75005 37 370 6.28E-101 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Patl_3823 2a026e7b3aec945ce88e088d3227e6d1 531 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 46 59 - T 11-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 Patl_3823 2a026e7b3aec945ce88e088d3227e6d1 531 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 389 518 9.4E-21 T 11-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal Patl_0123 aafe9223389c07059cd96362d2b8758b 944 SUPERFAMILY SSF49785 804 942 2.41E-16 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0123 aafe9223389c07059cd96362d2b8758b 944 Pfam PF00754 F5/8 type C domain 367 481 9.5E-10 T 11-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain Patl_0123 aafe9223389c07059cd96362d2b8758b 944 Pfam PF00754 F5/8 type C domain 517 593 1.5E-7 T 11-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain Patl_0123 aafe9223389c07059cd96362d2b8758b 944 Pfam PF00754 F5/8 type C domain 815 892 8.5E-9 T 11-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain Patl_0123 aafe9223389c07059cd96362d2b8758b 944 Pfam PF00754 F5/8 type C domain 669 786 2.7E-8 T 11-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain Patl_0123 aafe9223389c07059cd96362d2b8758b 944 SUPERFAMILY SSF49785 664 790 2.91E-20 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0123 aafe9223389c07059cd96362d2b8758b 944 SUPERFAMILY SSF49785 352 489 3.12E-21 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0123 aafe9223389c07059cd96362d2b8758b 944 Gene3D G3DSA:2.60.120.260 656 796 6.9E-22 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0123 aafe9223389c07059cd96362d2b8758b 944 Gene3D G3DSA:2.60.120.260 801 943 4.1E-18 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0123 aafe9223389c07059cd96362d2b8758b 944 Gene3D G3DSA:2.60.120.260 510 653 9.3E-18 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0123 aafe9223389c07059cd96362d2b8758b 944 Gene3D G3DSA:2.60.120.260 357 497 1.3E-20 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0123 aafe9223389c07059cd96362d2b8758b 944 SUPERFAMILY SSF49785 514 641 2.76E-17 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 PRINTS PR00301 70kDa heat shock protein signature 334 350 3.0E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 PRINTS PR00301 70kDa heat shock protein signature 211 221 3.0E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 PRINTS PR00301 70kDa heat shock protein signature 20 33 3.0E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 PRINTS PR00301 70kDa heat shock protein signature 390 409 3.0E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 PRINTS PR00301 70kDa heat shock protein signature 48 60 3.0E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 PRINTS PR00301 70kDa heat shock protein signature 152 172 3.0E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 PRINTS PR00301 70kDa heat shock protein signature 365 385 3.0E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 PRINTS PR00301 70kDa heat shock protein signature 471 487 3.0E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 PRINTS PR00301 70kDa heat shock protein signature 70 78 3.0E-57 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 SUPERFAMILY SSF100934 509 620 5.49E-31 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 Pfam PF00012 Hsp70 protein 21 606 3.4E-192 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 SUPERFAMILY SSF53067 200 382 1.0E-50 T 11-10-2018 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 SUPERFAMILY SSF53067 19 196 1.07E-51 T 11-10-2018 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 Gene3D G3DSA:3.30.420.40 22 379 9.3E-116 T 11-10-2018 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 Gene3D G3DSA:3.30.420.40 194 366 9.3E-116 T 11-10-2018 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 622 43.675 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 Gene3D G3DSA:1.20.1270.10 526 621 1.2E-23 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 620 3.4E-263 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 SUPERFAMILY SSF100920 389 539 2.88E-48 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 Gene3D G3DSA:3.90.640.10 238 316 9.3E-116 T 11-10-2018 Patl_1242 805e8e2192b68f51750e8f8a247d8463 622 Gene3D G3DSA:2.60.34.10 385 525 1.1E-47 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Patl_4220 51d86846be722a80f2709d8ba7e0808c 503 PIRSF PIRSF001267 6 503 6.5E-168 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 Patl_4220 51d86846be722a80f2709d8ba7e0808c 503 SUPERFAMILY SSF53067 15 134 3.99E-34 T 11-10-2018 Patl_4220 51d86846be722a80f2709d8ba7e0808c 503 Gene3D G3DSA:3.30.420.40 17 305 6.7E-77 T 11-10-2018 Patl_4220 51d86846be722a80f2709d8ba7e0808c 503 Gene3D G3DSA:1.10.3210.10 312 503 3.9E-49 T 11-10-2018 Patl_4220 51d86846be722a80f2709d8ba7e0808c 503 Pfam PF02541 Ppx/GppA phosphatase family 29 310 1.0E-75 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Patl_4220 51d86846be722a80f2709d8ba7e0808c 503 Gene3D G3DSA:3.30.420.150 120 297 6.7E-77 T 11-10-2018 Patl_4220 51d86846be722a80f2709d8ba7e0808c 503 SUPERFAMILY SSF53067 140 311 9.97E-42 T 11-10-2018 Patl_4220 51d86846be722a80f2709d8ba7e0808c 503 SUPERFAMILY SSF109604 315 502 4.29E-44 T 11-10-2018 Patl_4220 51d86846be722a80f2709d8ba7e0808c 503 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 10 503 53.61 T 11-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 Patl_3176 bdf83cdae2cac578ef6737cbd6b163e2 147 SUPERFAMILY SSF54534 8 146 1.85E-35 T 11-10-2018 Patl_3176 bdf83cdae2cac578ef6737cbd6b163e2 147 Gene3D G3DSA:2.40.10.330 76 132 1.6E-41 T 11-10-2018 Patl_3176 bdf83cdae2cac578ef6737cbd6b163e2 147 Gene3D G3DSA:3.10.50.40 17 144 1.6E-41 T 11-10-2018 Patl_3176 bdf83cdae2cac578ef6737cbd6b163e2 147 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 8 144 6.9E-14 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Patl_2910 ce3fbeeff337042fa00a114d8a2a72f3 121 Gene3D G3DSA:3.30.1130.10 2 120 1.5E-37 T 11-10-2018 Patl_2910 ce3fbeeff337042fa00a114d8a2a72f3 121 TIGRFAM TIGR00526 folB_dom: FolB domain 7 117 2.1E-28 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Patl_2910 ce3fbeeff337042fa00a114d8a2a72f3 121 SUPERFAMILY SSF55620 6 116 7.23E-28 T 11-10-2018 Patl_2910 ce3fbeeff337042fa00a114d8a2a72f3 121 SMART SM00905 8 118 2.8E-31 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Patl_2910 ce3fbeeff337042fa00a114d8a2a72f3 121 Pfam PF02152 Dihydroneopterin aldolase 8 115 1.5E-24 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Patl_4303 1ad99b1be31f6e113d14ddaf1a839900 290 SUPERFAMILY SSF110849 39 173 2.25E-34 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Patl_4303 1ad99b1be31f6e113d14ddaf1a839900 290 Gene3D G3DSA:1.10.10.2830 115 228 2.1E-35 T 11-10-2018 Patl_4303 1ad99b1be31f6e113d14ddaf1a839900 290 Gene3D G3DSA:3.90.1530.30 51 114 5.2E-27 T 11-10-2018 Patl_4303 1ad99b1be31f6e113d14ddaf1a839900 290 SMART SM00470 38 128 5.2E-34 T 11-10-2018 IPR003115 ParB/Sulfiredoxin Patl_4303 1ad99b1be31f6e113d14ddaf1a839900 290 Pfam PF02195 ParB-like nuclease domain 42 128 8.6E-27 T 11-10-2018 IPR003115 ParB/Sulfiredoxin Patl_4303 1ad99b1be31f6e113d14ddaf1a839900 290 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 35 207 4.6E-57 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Patl_3708 d6156265ea6e3cd7523fdb008addc354 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 96 6.0E-46 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Patl_3708 d6156265ea6e3cd7523fdb008addc354 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 2.0E-31 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Patl_3708 d6156265ea6e3cd7523fdb008addc354 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 3 125 1.4E-41 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Patl_3708 d6156265ea6e3cd7523fdb008addc354 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 8.8E-23 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Patl_3708 d6156265ea6e3cd7523fdb008addc354 126 Gene3D G3DSA:3.90.470.20 1 125 1.2E-37 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Patl_3708 d6156265ea6e3cd7523fdb008addc354 126 SUPERFAMILY SSF56214 3 124 1.96E-29 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Patl_3708 d6156265ea6e3cd7523fdb008addc354 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 125 24.352 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Patl_4047 87c50cc0ea257390cc2bc98e9f675019 447 ProSitePatterns PS00455 Putative AMP-binding domain signature. 134 145 - T 11-10-2018 IPR020845 AMP-binding, conserved site Patl_4047 87c50cc0ea257390cc2bc98e9f675019 447 Gene3D G3DSA:3.30.300.30 352 435 1.6E-15 T 11-10-2018 Patl_4047 87c50cc0ea257390cc2bc98e9f675019 447 Pfam PF13193 AMP-binding enzyme C-terminal domain 364 435 1.3E-8 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Patl_4047 87c50cc0ea257390cc2bc98e9f675019 447 Gene3D G3DSA:3.40.50.12780 1 351 3.5E-52 T 11-10-2018 Patl_4047 87c50cc0ea257390cc2bc98e9f675019 447 Pfam PF00501 AMP-binding enzyme 124 355 8.9E-32 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Patl_4047 87c50cc0ea257390cc2bc98e9f675019 447 SUPERFAMILY SSF56801 4 445 8.77E-75 T 11-10-2018 Patl_3315 0880fde97e674d533d14229c7c14132b 290 ProSitePatterns PS00211 ABC transporters family signature. 187 201 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_3315 0880fde97e674d533d14229c7c14132b 290 SMART SM00382 67 261 2.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3315 0880fde97e674d533d14229c7c14132b 290 Gene3D G3DSA:3.40.50.300 42 288 1.1E-62 T 11-10-2018 Patl_3315 0880fde97e674d533d14229c7c14132b 290 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 43 290 4.6E-120 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Patl_3315 0880fde97e674d533d14229c7c14132b 290 Pfam PF00005 ABC transporter 59 214 7.3E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_3315 0880fde97e674d533d14229c7c14132b 290 SUPERFAMILY SSF52540 43 277 2.6E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4042 b6f99e3157b9f71d9476ed41bf36361b 147 Gene3D G3DSA:2.60.40.1890 29 144 4.7E-37 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily Patl_4042 b6f99e3157b9f71d9476ed41bf36361b 147 Pfam PF04314 Copper chaperone PCu(A)C 26 133 2.6E-33 T 11-10-2018 IPR007410 Copper chaperone PCuAC Patl_4042 b6f99e3157b9f71d9476ed41bf36361b 147 SUPERFAMILY SSF110087 5 143 1.05E-44 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily Patl_3184 871912336294b88c42dcee2ee7445a7e 252 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 51 65 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_3184 871912336294b88c42dcee2ee7445a7e 252 SUPERFAMILY SSF55120 3 241 1.22E-58 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_3184 871912336294b88c42dcee2ee7445a7e 252 Pfam PF00849 RNA pseudouridylate synthase 12 169 1.9E-34 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_3184 871912336294b88c42dcee2ee7445a7e 252 Gene3D G3DSA:3.30.2350.10 3 236 1.8E-57 T 11-10-2018 Patl_1874 017ef7408dfb6eb6b173288577bb88a5 506 SUPERFAMILY SSF53720 14 497 3.93E-162 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_1874 017ef7408dfb6eb6b173288577bb88a5 506 Gene3D G3DSA:3.40.605.10 23 492 1.3E-163 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_1874 017ef7408dfb6eb6b173288577bb88a5 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 3.6E-165 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Patl_1874 017ef7408dfb6eb6b173288577bb88a5 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Patl_1874 017ef7408dfb6eb6b173288577bb88a5 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Patl_1874 017ef7408dfb6eb6b173288577bb88a5 506 Gene3D G3DSA:3.40.309.10 266 464 1.3E-163 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Patl_2311 f99e2f29ad7605e94b5e9f2ca2fbbaa1 373 Gene3D G3DSA:3.40.50.720 150 337 9.5E-147 T 11-10-2018 Patl_2311 f99e2f29ad7605e94b5e9f2ca2fbbaa1 373 Pfam PF00107 Zinc-binding dehydrogenase 181 258 2.4E-8 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_2311 f99e2f29ad7605e94b5e9f2ca2fbbaa1 373 Gene3D G3DSA:3.90.180.10 6 371 9.5E-147 T 11-10-2018 Patl_2311 f99e2f29ad7605e94b5e9f2ca2fbbaa1 373 SUPERFAMILY SSF51735 144 268 5.09E-17 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2311 f99e2f29ad7605e94b5e9f2ca2fbbaa1 373 SUPERFAMILY SSF50129 18 182 1.57E-21 T 11-10-2018 IPR011032 GroES-like superfamily Patl_0389 f570c5d7da465289e0207b2d5fe562a8 279 Pfam PF04116 Fatty acid hydroxylase superfamily 88 223 4.6E-28 T 11-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 Patl_1376 2c45ce42fba3dfc650c76b7a0c02ef57 443 Pfam PF03553 Na+/H+ antiporter family 68 225 3.3E-16 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Patl_2961 0d02b7ae207f9a5b74ad8f949a10bed0 218 PIRSF PIRSF006293 1 218 1.4E-79 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Patl_2961 0d02b7ae207f9a5b74ad8f949a10bed0 218 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 215 50.155 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Patl_2961 0d02b7ae207f9a5b74ad8f949a10bed0 218 SUPERFAMILY SSF52402 4 217 1.65E-64 T 11-10-2018 Patl_2961 0d02b7ae207f9a5b74ad8f949a10bed0 218 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 202 1.4E-67 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Patl_2961 0d02b7ae207f9a5b74ad8f949a10bed0 218 Gene3D G3DSA:3.40.50.620 2 216 3.6E-74 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_2961 0d02b7ae207f9a5b74ad8f949a10bed0 218 Pfam PF06508 Queuosine biosynthesis protein QueC 4 209 1.0E-69 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 Patl_3927 5afdd2290b5f21265d1585997ba07ce7 319 Pfam PF00005 ABC transporter 20 164 2.0E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_3927 5afdd2290b5f21265d1585997ba07ce7 319 SUPERFAMILY SSF52540 32 300 2.67E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3927 5afdd2290b5f21265d1585997ba07ce7 319 Gene3D G3DSA:3.40.50.300 1 235 4.3E-62 T 11-10-2018 Patl_3927 5afdd2290b5f21265d1585997ba07ce7 319 SUPERFAMILY SSF52540 4 231 1.81E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3927 5afdd2290b5f21265d1585997ba07ce7 319 SMART SM00382 29 211 1.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3927 5afdd2290b5f21265d1585997ba07ce7 319 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_0031 90543e311d324f48609ef9ad3e02d08e 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 271 29.57 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Patl_0031 90543e311d324f48609ef9ad3e02d08e 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 6.9E-23 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Patl_0031 90543e311d324f48609ef9ad3e02d08e 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 272 3.8E-85 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Patl_0031 90543e311d324f48609ef9ad3e02d08e 272 Gene3D G3DSA:3.40.50.10860 4 255 4.0E-79 T 11-10-2018 Patl_0031 90543e311d324f48609ef9ad3e02d08e 272 SUPERFAMILY SSF51735 102 271 7.27E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0031 90543e311d324f48609ef9ad3e02d08e 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 112 192 1.4E-12 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Patl_0031 90543e311d324f48609ef9ad3e02d08e 272 Gene3D G3DSA:3.40.50.720 115 237 4.0E-79 T 11-10-2018 Patl_0031 90543e311d324f48609ef9ad3e02d08e 272 SUPERFAMILY SSF53223 1 101 2.65E-30 T 11-10-2018 Patl_1816 73fc34463022c907cb697f33dfba5122 388 SUPERFAMILY SSF51197 242 366 3.57E-13 T 11-10-2018 Patl_1816 73fc34463022c907cb697f33dfba5122 388 Gene3D G3DSA:2.60.120.330 174 377 1.2E-57 T 11-10-2018 IPR027443 Isopenicillin N synthase-like Patl_1816 73fc34463022c907cb697f33dfba5122 388 Gene3D G3DSA:1.25.40.10 3 117 7.8E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1816 73fc34463022c907cb697f33dfba5122 388 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 200 365 1.2E-40 T 11-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 Patl_1816 73fc34463022c907cb697f33dfba5122 388 SUPERFAMILY SSF48452 9 102 3.8E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2512 c38c7103492a7175c32df1c830272fe4 221 Gene3D G3DSA:3.90.550.10 18 217 3.7E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_2512 c38c7103492a7175c32df1c830272fe4 221 SUPERFAMILY SSF53448 21 218 2.7E-25 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_2512 c38c7103492a7175c32df1c830272fe4 221 Pfam PF12804 MobA-like NTP transferase domain 23 186 7.2E-33 T 11-10-2018 IPR025877 MobA-like NTP transferase Patl_1693 a06e50ab79d96a7bcafa5d7e41528b15 152 Pfam PF17384 RimP C-terminal SH3 domain 86 151 3.2E-15 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal Patl_1693 a06e50ab79d96a7bcafa5d7e41528b15 152 SUPERFAMILY SSF75420 3 83 1.02E-25 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily Patl_1693 a06e50ab79d96a7bcafa5d7e41528b15 152 Gene3D G3DSA:3.30.300.70 1 80 1.2E-26 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily Patl_1693 a06e50ab79d96a7bcafa5d7e41528b15 152 Pfam PF02576 RimP N-terminal domain 13 83 1.3E-28 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal Patl_1693 a06e50ab79d96a7bcafa5d7e41528b15 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 23.255 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Patl_1693 a06e50ab79d96a7bcafa5d7e41528b15 152 SUPERFAMILY SSF74942 84 151 3.27E-16 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Patl_0947 635db44054fa1097251e83d71305f9b7 539 SMART SM00448 6 122 3.4E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0947 635db44054fa1097251e83d71305f9b7 539 SUPERFAMILY SSF48452 167 309 2.25E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0947 635db44054fa1097251e83d71305f9b7 539 Gene3D G3DSA:3.40.50.2300 1 132 1.3E-17 T 11-10-2018 Patl_0947 635db44054fa1097251e83d71305f9b7 539 Gene3D G3DSA:1.25.40.10 139 336 9.7E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0947 635db44054fa1097251e83d71305f9b7 539 Pfam PF00072 Response regulator receiver domain 8 122 1.5E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0947 635db44054fa1097251e83d71305f9b7 539 SUPERFAMILY SSF52172 4 144 3.27E-19 T 11-10-2018 IPR011006 CheY-like superfamily Patl_0644 cc9c5026c348b6631cfafd32aa284fe0 222 Gene3D G3DSA:1.10.10.10 123 221 1.0E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0644 cc9c5026c348b6631cfafd32aa284fe0 222 Gene3D G3DSA:3.40.50.2300 1 122 9.1E-37 T 11-10-2018 Patl_0644 cc9c5026c348b6631cfafd32aa284fe0 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 215 7.0E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_0644 cc9c5026c348b6631cfafd32aa284fe0 222 SUPERFAMILY SSF46894 121 215 1.67E-25 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_0644 cc9c5026c348b6631cfafd32aa284fe0 222 SMART SM00448 1 112 2.1E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0644 cc9c5026c348b6631cfafd32aa284fe0 222 SUPERFAMILY SSF52172 1 128 6.83E-37 T 11-10-2018 IPR011006 CheY-like superfamily Patl_0644 cc9c5026c348b6631cfafd32aa284fe0 222 Pfam PF00072 Response regulator receiver domain 3 112 2.3E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0644 cc9c5026c348b6631cfafd32aa284fe0 222 SMART SM00862 145 216 1.8E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_0554 116c1df448f54a11bad1d0ae40402008 328 SUPERFAMILY SSF50494 12 248 3.21E-52 T 11-10-2018 IPR009003 Peptidase S1, PA clan Patl_0554 116c1df448f54a11bad1d0ae40402008 328 PRINTS PR00834 HtrA/DegQ protease family signature 94 114 4.8E-41 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Patl_0554 116c1df448f54a11bad1d0ae40402008 328 PRINTS PR00834 HtrA/DegQ protease family signature 134 158 4.8E-41 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Patl_0554 116c1df448f54a11bad1d0ae40402008 328 PRINTS PR00834 HtrA/DegQ protease family signature 167 184 4.8E-41 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Patl_0554 116c1df448f54a11bad1d0ae40402008 328 PRINTS PR00834 HtrA/DegQ protease family signature 189 206 4.8E-41 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Patl_0554 116c1df448f54a11bad1d0ae40402008 328 PRINTS PR00834 HtrA/DegQ protease family signature 73 85 4.8E-41 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Patl_0554 116c1df448f54a11bad1d0ae40402008 328 PRINTS PR00834 HtrA/DegQ protease family signature 271 283 4.8E-41 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Patl_0554 116c1df448f54a11bad1d0ae40402008 328 SUPERFAMILY SSF50156 224 320 3.94E-21 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Patl_0554 116c1df448f54a11bad1d0ae40402008 328 SMART SM00228 241 313 6.2E-11 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Patl_0554 116c1df448f54a11bad1d0ae40402008 328 Pfam PF13365 Trypsin-like peptidase domain 64 196 4.5E-27 T 11-10-2018 Patl_0554 116c1df448f54a11bad1d0ae40402008 328 Gene3D G3DSA:2.40.10.10 129 240 2.0E-31 T 11-10-2018 Patl_0554 116c1df448f54a11bad1d0ae40402008 328 Gene3D G3DSA:2.30.42.10 241 326 1.9E-19 T 11-10-2018 Patl_0554 116c1df448f54a11bad1d0ae40402008 328 Pfam PF13180 PDZ domain 241 321 1.8E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Patl_0554 116c1df448f54a11bad1d0ae40402008 328 Gene3D G3DSA:2.40.10.10 11 123 2.4E-27 T 11-10-2018 Patl_0591 8dc08bd04c9b9b355bff00c08c076ea6 613 ProSitePatterns PS00211 ABC transporters family signature. 507 521 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_0591 8dc08bd04c9b9b355bff00c08c076ea6 613 Pfam PF00664 ABC transporter transmembrane region 39 307 3.9E-23 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Patl_0591 8dc08bd04c9b9b355bff00c08c076ea6 613 SUPERFAMILY SSF52540 351 605 2.77E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0591 8dc08bd04c9b9b355bff00c08c076ea6 613 SUPERFAMILY SSF90123 30 347 1.12E-53 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Patl_0591 8dc08bd04c9b9b355bff00c08c076ea6 613 SMART SM00382 390 581 5.5E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0591 8dc08bd04c9b9b355bff00c08c076ea6 613 Pfam PF00005 ABC transporter 382 535 9.3E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_0591 8dc08bd04c9b9b355bff00c08c076ea6 613 Gene3D G3DSA:3.40.50.300 351 608 7.5E-92 T 11-10-2018 Patl_0591 8dc08bd04c9b9b355bff00c08c076ea6 613 Gene3D G3DSA:1.20.1560.10 16 342 2.2E-29 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Patl_3755 717cee0b94f69cfe850617c888ee449a 427 Pfam PF12358 Protein of unknown function (DUF3644) 132 203 6.5E-10 T 11-10-2018 IPR022104 Protein of unknown function DUF3644 Patl_1166 da0d3bd1e17d03481a12acf7e87e3250 585 SUPERFAMILY SSF51735 395 524 3.04E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1166 da0d3bd1e17d03481a12acf7e87e3250 585 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 11 279 1.1E-75 T 11-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 Patl_1166 da0d3bd1e17d03481a12acf7e87e3250 585 Pfam PF02254 TrkA-N domain 396 509 8.1E-24 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Patl_1166 da0d3bd1e17d03481a12acf7e87e3250 585 Gene3D G3DSA:3.40.50.720 392 553 1.6E-35 T 11-10-2018 Patl_1166 da0d3bd1e17d03481a12acf7e87e3250 585 Gene3D G3DSA:1.20.1530.20 3 380 5.5E-77 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Patl_1166 da0d3bd1e17d03481a12acf7e87e3250 585 Pfam PF00999 Sodium/hydrogen exchanger family 8 369 6.9E-59 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Patl_1563 918bd15c6ddb0744e5f232dcee6662de 219 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 69 3.9E-8 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Patl_1563 918bd15c6ddb0744e5f232dcee6662de 219 SUPERFAMILY SSF52374 8 213 2.6E-50 T 11-10-2018 Patl_1563 918bd15c6ddb0744e5f232dcee6662de 219 Pfam PF01467 Cytidylyltransferase-like 10 188 2.6E-28 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Patl_1563 918bd15c6ddb0744e5f232dcee6662de 219 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 6 214 28.295 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Patl_1563 918bd15c6ddb0744e5f232dcee6662de 219 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 10 213 1.1E-52 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Patl_1563 918bd15c6ddb0744e5f232dcee6662de 219 Gene3D G3DSA:3.40.50.620 7 217 5.3E-62 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_3502 04cbe819a69f736c1559898f64bbe7db 443 Gene3D G3DSA:3.90.230.10 176 443 1.1E-98 T 11-10-2018 Patl_3502 04cbe819a69f736c1559898f64bbe7db 443 Pfam PF00557 Metallopeptidase family M24 185 415 1.8E-64 T 11-10-2018 IPR000994 Peptidase M24 Patl_3502 04cbe819a69f736c1559898f64bbe7db 443 Gene3D G3DSA:3.40.350.10 4 175 4.7E-52 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Patl_3502 04cbe819a69f736c1559898f64bbe7db 443 SUPERFAMILY SSF55920 181 439 2.09E-85 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like Patl_3502 04cbe819a69f736c1559898f64bbe7db 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 352 364 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Patl_3502 04cbe819a69f736c1559898f64bbe7db 443 SMART SM01011 4 140 1.1E-57 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 Patl_3502 04cbe819a69f736c1559898f64bbe7db 443 Pfam PF05195 Aminopeptidase P, N-terminal domain 9 130 1.9E-34 T 11-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 Patl_3502 04cbe819a69f736c1559898f64bbe7db 443 SUPERFAMILY SSF53092 4 178 3.61E-48 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Patl_0068 d09daab029390ac7059c0912963881d3 648 SMART SM00283 384 645 9.6E-58 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_0068 d09daab029390ac7059c0912963881d3 648 SUPERFAMILY SSF58104 337 645 4.84E-68 T 11-10-2018 Patl_0068 d09daab029390ac7059c0912963881d3 648 Pfam PF00672 HAMP domain 323 365 1.2E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_0068 d09daab029390ac7059c0912963881d3 648 Gene3D G3DSA:1.10.287.950 317 645 7.1E-67 T 11-10-2018 Patl_0068 d09daab029390ac7059c0912963881d3 648 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 428 612 1.5E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_0068 d09daab029390ac7059c0912963881d3 648 SMART SM00304 317 369 3.1E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_2016 c888ab290a856dda9e00f7178323d523 275 Pfam PF06283 Trehalose utilisation 45 265 2.2E-67 T 11-10-2018 IPR029010 ThuA-like domain Patl_2016 c888ab290a856dda9e00f7178323d523 275 Gene3D G3DSA:3.40.50.880 32 272 7.6E-73 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_2016 c888ab290a856dda9e00f7178323d523 275 SUPERFAMILY SSF52317 44 270 8.47E-41 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_1583 6379b4b98a271a69adc42e7d8badeb86 330 Pfam PF05971 Protein of unknown function (DUF890) 23 330 2.3E-112 T 11-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 Patl_1583 6379b4b98a271a69adc42e7d8badeb86 330 SUPERFAMILY SSF53335 61 329 1.66E-19 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_1583 6379b4b98a271a69adc42e7d8badeb86 330 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 23 330 51.088 T 11-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 Patl_1583 6379b4b98a271a69adc42e7d8badeb86 330 PIRSF PIRSF029038 12 330 1.5E-128 T 11-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 Patl_1583 6379b4b98a271a69adc42e7d8badeb86 330 Gene3D G3DSA:3.40.50.150 56 330 2.2E-75 T 11-10-2018 Patl_1238 314c5f176b6f85e4ccf198d5905f4bd1 407 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 4 407 1.6E-227 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Patl_1238 314c5f176b6f85e4ccf198d5905f4bd1 407 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 4 398 53.397 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 Patl_1238 314c5f176b6f85e4ccf198d5905f4bd1 407 Gene3D G3DSA:3.40.640.10 19 265 8.8E-161 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_1238 314c5f176b6f85e4ccf198d5905f4bd1 407 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 200 219 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Patl_1238 314c5f176b6f85e4ccf198d5905f4bd1 407 Pfam PF00266 Aminotransferase class-V 8 371 3.6E-81 T 11-10-2018 IPR000192 Aminotransferase class V domain Patl_1238 314c5f176b6f85e4ccf198d5905f4bd1 407 Gene3D G3DSA:3.90.1150.10 8 379 8.8E-161 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_1238 314c5f176b6f85e4ccf198d5905f4bd1 407 PIRSF PIRSF005572 5 387 1.9E-130 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Patl_1238 314c5f176b6f85e4ccf198d5905f4bd1 407 SUPERFAMILY SSF53383 8 394 2.37E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_3954 302d8f84f2806b0e54b4c94da7f44163 300 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 20 277 3.2E-89 T 11-10-2018 IPR017039 Virulence factor BrkB Patl_3954 302d8f84f2806b0e54b4c94da7f44163 300 PIRSF PIRSF035875 11 298 3.7E-55 T 11-10-2018 IPR017039 Virulence factor BrkB Patl_3954 302d8f84f2806b0e54b4c94da7f44163 300 Pfam PF03631 Virulence factor BrkB 31 277 9.4E-60 T 11-10-2018 IPR017039 Virulence factor BrkB Patl_3954 302d8f84f2806b0e54b4c94da7f44163 300 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 20 294 23.433 T 11-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial Patl_0611 1aff5c7c5284eafb107d8621204625db 346 SUPERFAMILY SSF53474 57 340 3.69E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0611 1aff5c7c5284eafb107d8621204625db 346 Pfam PF00561 alpha/beta hydrolase fold 82 222 2.6E-20 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_0611 1aff5c7c5284eafb107d8621204625db 346 Gene3D G3DSA:3.40.50.1820 39 346 2.7E-68 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0611 1aff5c7c5284eafb107d8621204625db 346 PRINTS PR00111 Alpha/beta hydrolase fold signature 275 289 6.9E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_0611 1aff5c7c5284eafb107d8621204625db 346 PRINTS PR00111 Alpha/beta hydrolase fold signature 153 166 6.9E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_0611 1aff5c7c5284eafb107d8621204625db 346 PRINTS PR00111 Alpha/beta hydrolase fold signature 167 180 6.9E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_0611 1aff5c7c5284eafb107d8621204625db 346 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 123 6.9E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_2297 c1d9a3d6c39c64323bbf99ec7cfbc283 180 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 167 178 - T 11-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Patl_2297 c1d9a3d6c39c64323bbf99ec7cfbc283 180 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 71 81 - T 11-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Patl_2297 c1d9a3d6c39c64323bbf99ec7cfbc283 180 SUPERFAMILY SSF49329 33 178 5.37E-49 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Patl_2297 c1d9a3d6c39c64323bbf99ec7cfbc283 180 Gene3D G3DSA:2.60.40.200 29 179 3.6E-49 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Patl_2297 c1d9a3d6c39c64323bbf99ec7cfbc283 180 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 40 178 6.6E-34 T 11-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 Patl_1121 243020da0c89a7e5f621cfeb3d68e15a 336 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 2.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1121 243020da0c89a7e5f621cfeb3d68e15a 336 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 2.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1121 243020da0c89a7e5f621cfeb3d68e15a 336 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 2.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1121 243020da0c89a7e5f621cfeb3d68e15a 336 SUPERFAMILY SSF46785 11 94 1.09E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1121 243020da0c89a7e5f621cfeb3d68e15a 336 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 71 8.3E-22 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1121 243020da0c89a7e5f621cfeb3d68e15a 336 Gene3D G3DSA:1.10.10.10 10 97 2.6E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1121 243020da0c89a7e5f621cfeb3d68e15a 336 SUPERFAMILY SSF53850 97 325 1.1E-21 T 11-10-2018 Patl_1121 243020da0c89a7e5f621cfeb3d68e15a 336 Pfam PF03466 LysR substrate binding domain 97 327 5.9E-18 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_1121 243020da0c89a7e5f621cfeb3d68e15a 336 Gene3D G3DSA:3.40.190.290 100 329 1.5E-17 T 11-10-2018 Patl_3467 2ab238476905bf7b33427507f85166a5 439 Gene3D G3DSA:1.10.4160.10 4 434 1.3E-45 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily Patl_3467 2ab238476905bf7b33427507f85166a5 439 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 48 399 5.4E-21 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Patl_2359 68f7f26f6f2d49487a340d4846ceef34 449 SUPERFAMILY SSF118215 14 423 9.42E-124 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Patl_2359 68f7f26f6f2d49487a340d4846ceef34 449 Gene3D G3DSA:1.10.3860.10 4 440 1.8E-141 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 Patl_2359 68f7f26f6f2d49487a340d4846ceef34 449 Pfam PF00375 Sodium:dicarboxylate symporter family 14 421 8.4E-133 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Patl_2359 68f7f26f6f2d49487a340d4846ceef34 449 PRINTS PR00173 Glutamate-aspartate symporter signature 349 368 8.2E-43 T 11-10-2018 Patl_2359 68f7f26f6f2d49487a340d4846ceef34 449 PRINTS PR00173 Glutamate-aspartate symporter signature 376 396 8.2E-43 T 11-10-2018 Patl_2359 68f7f26f6f2d49487a340d4846ceef34 449 PRINTS PR00173 Glutamate-aspartate symporter signature 212 231 8.2E-43 T 11-10-2018 Patl_2359 68f7f26f6f2d49487a340d4846ceef34 449 PRINTS PR00173 Glutamate-aspartate symporter signature 102 127 8.2E-43 T 11-10-2018 Patl_2359 68f7f26f6f2d49487a340d4846ceef34 449 PRINTS PR00173 Glutamate-aspartate symporter signature 247 266 8.2E-43 T 11-10-2018 Patl_2359 68f7f26f6f2d49487a340d4846ceef34 449 PRINTS PR00173 Glutamate-aspartate symporter signature 12 32 8.2E-43 T 11-10-2018 Patl_2359 68f7f26f6f2d49487a340d4846ceef34 449 PRINTS PR00173 Glutamate-aspartate symporter signature 314 340 8.2E-43 T 11-10-2018 Patl_3479 ffff5ccb5c6c393b706d4bdf836a2dbd 580 Gene3D G3DSA:3.60.40.10 4 245 4.8E-41 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Patl_3479 ffff5ccb5c6c393b706d4bdf836a2dbd 580 Pfam PF13672 Protein phosphatase 2C 17 215 6.3E-18 T 11-10-2018 Patl_3479 ffff5ccb5c6c393b706d4bdf836a2dbd 580 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 395 407 - T 11-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 Patl_3479 ffff5ccb5c6c393b706d4bdf836a2dbd 580 SMART SM00332 5 241 3.2E-14 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Patl_3479 ffff5ccb5c6c393b706d4bdf836a2dbd 580 Pfam PF00069 Protein kinase domain 288 527 2.2E-35 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Patl_3479 ffff5ccb5c6c393b706d4bdf836a2dbd 580 SMART SM00331 19 243 1.7E-14 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Patl_3479 ffff5ccb5c6c393b706d4bdf836a2dbd 580 SUPERFAMILY SSF56112 259 538 7.96E-54 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Patl_3479 ffff5ccb5c6c393b706d4bdf836a2dbd 580 SUPERFAMILY SSF81606 6 243 2.62E-45 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Patl_3479 ffff5ccb5c6c393b706d4bdf836a2dbd 580 Gene3D G3DSA:1.10.510.10 357 547 5.2E-37 T 11-10-2018 Patl_3479 ffff5ccb5c6c393b706d4bdf836a2dbd 580 Gene3D G3DSA:3.30.200.20 266 355 3.1E-8 T 11-10-2018 Patl_0146 7a473c5a0a1180761fd2ce6ec6e6c61c 942 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 924 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Patl_0146 7a473c5a0a1180761fd2ce6ec6e6c61c 942 Gene3D G3DSA:1.20.1580.10 692 830 3.9E-139 T 11-10-2018 Patl_0146 7a473c5a0a1180761fd2ce6ec6e6c61c 942 Gene3D G3DSA:1.20.1580.10 90 492 2.1E-247 T 11-10-2018 Patl_0146 7a473c5a0a1180761fd2ce6ec6e6c61c 942 SUPERFAMILY SSF52540 5 569 2.92E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0146 7a473c5a0a1180761fd2ce6ec6e6c61c 942 Gene3D G3DSA:3.40.50.300 6 595 2.1E-247 T 11-10-2018 Patl_0146 7a473c5a0a1180761fd2ce6ec6e6c61c 942 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.737 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Patl_0146 7a473c5a0a1180761fd2ce6ec6e6c61c 942 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_0146 7a473c5a0a1180761fd2ce6ec6e6c61c 942 SUPERFAMILY SSF52540 622 911 2.2E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0146 7a473c5a0a1180761fd2ce6ec6e6c61c 942 Gene3D G3DSA:3.30.190.20 130 239 2.1E-247 T 11-10-2018 Patl_0146 7a473c5a0a1180761fd2ce6ec6e6c61c 942 Pfam PF00005 ABC transporter 623 860 1.6E-9 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_0146 7a473c5a0a1180761fd2ce6ec6e6c61c 942 Gene3D G3DSA:1.10.8.280 287 403 2.1E-247 T 11-10-2018 Patl_0146 7a473c5a0a1180761fd2ce6ec6e6c61c 942 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_0146 7a473c5a0a1180761fd2ce6ec6e6c61c 942 Gene3D G3DSA:3.40.50.300 617 936 3.9E-139 T 11-10-2018 Patl_1009 76bb1134de853e43cabc9637e4c47643 439 Pfam PF00344 SecY translocase 74 413 2.7E-116 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Patl_1009 76bb1134de853e43cabc9637e4c47643 439 Gene3D G3DSA:1.10.3370.10 11 425 1.3E-159 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Patl_1009 76bb1134de853e43cabc9637e4c47643 439 SUPERFAMILY SSF103491 13 420 3.79E-133 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Patl_1009 76bb1134de853e43cabc9637e4c47643 439 Hamap MF_01465 Protein translocase subunit SecY [secY]. 8 429 29.509 T 11-10-2018 IPR026593 Protein translocase subunit SecY Patl_1009 76bb1134de853e43cabc9637e4c47643 439 ProSitePatterns PS00756 Protein secY signature 2. 169 186 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Patl_1009 76bb1134de853e43cabc9637e4c47643 439 ProSitePatterns PS00755 Protein secY signature 1. 74 93 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Patl_1009 76bb1134de853e43cabc9637e4c47643 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 268 287 3.7E-96 T 11-10-2018 Patl_1009 76bb1134de853e43cabc9637e4c47643 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 398 416 3.7E-96 T 11-10-2018 Patl_1009 76bb1134de853e43cabc9637e4c47643 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 73 93 3.7E-96 T 11-10-2018 Patl_1009 76bb1134de853e43cabc9637e4c47643 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 176 199 3.7E-96 T 11-10-2018 Patl_1009 76bb1134de853e43cabc9637e4c47643 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 150 175 3.7E-96 T 11-10-2018 Patl_1009 76bb1134de853e43cabc9637e4c47643 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 21 39 3.7E-96 T 11-10-2018 Patl_1009 76bb1134de853e43cabc9637e4c47643 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 114 137 3.7E-96 T 11-10-2018 Patl_1009 76bb1134de853e43cabc9637e4c47643 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 311 333 3.7E-96 T 11-10-2018 Patl_1009 76bb1134de853e43cabc9637e4c47643 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 366 384 3.7E-96 T 11-10-2018 Patl_1009 76bb1134de853e43cabc9637e4c47643 439 PIRSF PIRSF004557 6 437 5.2E-125 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Patl_1009 76bb1134de853e43cabc9637e4c47643 439 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 18 425 2.5E-136 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Patl_3631 7ba269abde8ba725dc2cb371051068a9 628 SUPERFAMILY SSF48452 188 396 3.41E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3631 7ba269abde8ba725dc2cb371051068a9 628 SUPERFAMILY SSF48452 62 181 5.06E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3631 7ba269abde8ba725dc2cb371051068a9 628 SUPERFAMILY SSF55073 465 620 9.42E-45 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3631 7ba269abde8ba725dc2cb371051068a9 628 SMART SM00267 449 620 9.7E-58 T 11-10-2018 IPR000160 GGDEF domain Patl_3631 7ba269abde8ba725dc2cb371051068a9 628 Gene3D G3DSA:3.30.70.270 449 622 4.2E-52 T 11-10-2018 Patl_3631 7ba269abde8ba725dc2cb371051068a9 628 Gene3D G3DSA:1.25.40.10 187 421 1.4E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3631 7ba269abde8ba725dc2cb371051068a9 628 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 457 619 7.2E-51 T 11-10-2018 IPR000160 GGDEF domain Patl_3631 7ba269abde8ba725dc2cb371051068a9 628 SMART SM00028 146 179 29.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3631 7ba269abde8ba725dc2cb371051068a9 628 SMART SM00028 186 219 0.085 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3631 7ba269abde8ba725dc2cb371051068a9 628 SMART SM00028 346 379 220.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3631 7ba269abde8ba725dc2cb371051068a9 628 SMART SM00028 266 299 53.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3631 7ba269abde8ba725dc2cb371051068a9 628 Pfam PF00990 Diguanylate cyclase, GGDEF domain 460 616 3.5E-44 T 11-10-2018 IPR000160 GGDEF domain Patl_3631 7ba269abde8ba725dc2cb371051068a9 628 Gene3D G3DSA:1.25.40.10 19 186 2.6E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1775 29919adeb14587e48521ae112933c2e1 444 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 5 433 8.3E-50 T 11-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 Patl_1775 29919adeb14587e48521ae112933c2e1 444 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 435 23.281 T 11-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 Patl_1775 29919adeb14587e48521ae112933c2e1 444 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 305 431 4.9E-44 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 Patl_1775 29919adeb14587e48521ae112933c2e1 444 SMART SM00771 303 433 6.2E-53 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 Patl_1775 29919adeb14587e48521ae112933c2e1 444 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 306 435 7.0E-72 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 Patl_1775 29919adeb14587e48521ae112933c2e1 444 Gene3D G3DSA:3.30.1400.10 301 441 1.9E-48 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 Patl_1775 29919adeb14587e48521ae112933c2e1 444 SUPERFAMILY SSF64383 303 439 3.53E-47 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 Patl_0291 1961f8d5cbe73fc6218155743ce24a1b 423 SMART SM00922 146 277 6.0E-13 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Patl_0291 1961f8d5cbe73fc6218155743ce24a1b 423 SUPERFAMILY SSF51604 116 407 4.06E-73 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Patl_0291 1961f8d5cbe73fc6218155743ce24a1b 423 Gene3D G3DSA:3.30.390.10 21 420 4.9E-161 T 11-10-2018 IPR029017 Enolase-like, N-terminal Patl_0291 1961f8d5cbe73fc6218155743ce24a1b 423 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 103 128 - T 11-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Patl_0291 1961f8d5cbe73fc6218155743ce24a1b 423 Pfam PF13378 Enolase C-terminal domain-like 159 398 3.0E-43 T 11-10-2018 IPR029065 Enolase C-terminal domain-like Patl_0291 1961f8d5cbe73fc6218155743ce24a1b 423 Gene3D G3DSA:3.20.20.120 123 389 4.9E-161 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Patl_0291 1961f8d5cbe73fc6218155743ce24a1b 423 SUPERFAMILY SSF54826 19 130 2.8E-34 T 11-10-2018 Patl_0291 1961f8d5cbe73fc6218155743ce24a1b 423 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 33 128 1.7E-31 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Patl_0135 15700250b0c8ca181bb925c2b1a37a88 78 Gene3D G3DSA:1.10.10.610 1 74 6.9E-27 T 11-10-2018 IPR036685 YehU-like superfamily Patl_0135 15700250b0c8ca181bb925c2b1a37a88 78 PIRSF PIRSF006169 1 76 1.1E-29 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 Patl_0135 15700250b0c8ca181bb925c2b1a37a88 78 SUPERFAMILY SSF118001 1 70 1.15E-26 T 11-10-2018 IPR036685 YehU-like superfamily Patl_0135 15700250b0c8ca181bb925c2b1a37a88 78 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 68 3.0E-33 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 Patl_0135 15700250b0c8ca181bb925c2b1a37a88 78 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 69 1.2E-30 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 Patl_4314 fc3f4400644da80f7bc1607246e75637 120 Pfam PF00825 Ribonuclease P 6 112 6.8E-30 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Patl_4314 fc3f4400644da80f7bc1607246e75637 120 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 3.0E-27 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Patl_4314 fc3f4400644da80f7bc1607246e75637 120 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 11-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 Patl_4314 fc3f4400644da80f7bc1607246e75637 120 Gene3D G3DSA:3.30.230.10 2 119 4.4E-38 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Patl_4314 fc3f4400644da80f7bc1607246e75637 120 SUPERFAMILY SSF54211 6 117 8.6E-29 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_4314 fc3f4400644da80f7bc1607246e75637 120 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.079 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Patl_4314 fc3f4400644da80f7bc1607246e75637 120 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 38 107 6.0E-34 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Patl_2660 c311d054e563026b455807f7d9f71e1b 687 ProSitePatterns PS00211 ABC transporters family signature. 590 604 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_2660 c311d054e563026b455807f7d9f71e1b 687 Gene3D G3DSA:3.40.50.300 438 685 9.4E-82 T 11-10-2018 Patl_2660 c311d054e563026b455807f7d9f71e1b 687 Gene3D G3DSA:1.20.1560.10 124 437 3.8E-52 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Patl_2660 c311d054e563026b455807f7d9f71e1b 687 Pfam PF00664 ABC transporter transmembrane region 141 400 1.8E-22 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Patl_2660 c311d054e563026b455807f7d9f71e1b 687 Pfam PF00005 ABC transporter 469 618 6.9E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_2660 c311d054e563026b455807f7d9f71e1b 687 SUPERFAMILY SSF90123 119 437 1.09E-51 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Patl_2660 c311d054e563026b455807f7d9f71e1b 687 Gene3D G3DSA:3.90.70.10 2 109 1.1E-25 T 11-10-2018 Patl_2660 c311d054e563026b455807f7d9f71e1b 687 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 4 681 2.5E-261 T 11-10-2018 IPR017750 ATPase, type I secretion system Patl_2660 c311d054e563026b455807f7d9f71e1b 687 SMART SM00382 478 664 2.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2660 c311d054e563026b455807f7d9f71e1b 687 SUPERFAMILY SSF52540 441 676 2.55E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2175 48d9e601755857afe6919cc92de1bb2e 290 SUPERFAMILY SSF48179 166 288 7.25E-39 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_2175 48d9e601755857afe6919cc92de1bb2e 290 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 285 1.3E-33 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 Patl_2175 48d9e601755857afe6919cc92de1bb2e 290 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 Patl_2175 48d9e601755857afe6919cc92de1bb2e 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 158 1.3E-48 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Patl_2175 48d9e601755857afe6919cc92de1bb2e 290 Gene3D G3DSA:3.40.50.720 1 164 4.6E-52 T 11-10-2018 Patl_2175 48d9e601755857afe6919cc92de1bb2e 290 PIRSF PIRSF000103 1 290 3.1E-73 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Patl_2175 48d9e601755857afe6919cc92de1bb2e 290 Gene3D G3DSA:1.10.1040.10 165 290 9.6E-38 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Patl_2175 48d9e601755857afe6919cc92de1bb2e 290 SUPERFAMILY SSF51735 3 165 3.18E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2967 49e9d6b5f8fa2163e1da0f3a3b48572b 890 Pfam PF10531 SLBB domain 304 354 3.6E-11 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Patl_2967 49e9d6b5f8fa2163e1da0f3a3b48572b 890 Gene3D G3DSA:3.40.50.11540 153 299 5.5E-11 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Patl_2967 49e9d6b5f8fa2163e1da0f3a3b48572b 890 Pfam PF13237 4Fe-4S dicluster domain 385 437 2.4E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Patl_2967 49e9d6b5f8fa2163e1da0f3a3b48572b 890 SUPERFAMILY SSF46548 345 454 2.49E-20 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Patl_2967 49e9d6b5f8fa2163e1da0f3a3b48572b 890 Pfam PF13375 RnfC Barrel sandwich hybrid domain 22 123 1.5E-32 T 11-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Patl_2967 49e9d6b5f8fa2163e1da0f3a3b48572b 890 SUPERFAMILY SSF142019 104 311 3.92E-60 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Patl_2967 49e9d6b5f8fa2163e1da0f3a3b48572b 890 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 426 437 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Patl_2967 49e9d6b5f8fa2163e1da0f3a3b48572b 890 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 150 291 2.2E-49 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Patl_2967 49e9d6b5f8fa2163e1da0f3a3b48572b 890 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 774 213.91 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Patl_2967 49e9d6b5f8fa2163e1da0f3a3b48572b 890 Gene3D G3DSA:1.10.1060.10 373 454 7.7E-11 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Patl_2967 49e9d6b5f8fa2163e1da0f3a3b48572b 890 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 21 455 8.4E-184 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 Patl_2521 1399aa2cb9a1e9dc7406f70c1d883c57 143 Gene3D G3DSA:3.10.580.10 1 143 3.7E-34 T 11-10-2018 Patl_2521 1399aa2cb9a1e9dc7406f70c1d883c57 143 SUPERFAMILY SSF54631 1 132 8.42E-32 T 11-10-2018 Patl_2521 1399aa2cb9a1e9dc7406f70c1d883c57 143 SMART SM00116 84 132 8.6E-8 T 11-10-2018 IPR000644 CBS domain Patl_2521 1399aa2cb9a1e9dc7406f70c1d883c57 143 SMART SM00116 10 57 8.1E-12 T 11-10-2018 IPR000644 CBS domain Patl_2521 1399aa2cb9a1e9dc7406f70c1d883c57 143 Pfam PF00571 CBS domain 78 132 1.3E-13 T 11-10-2018 IPR000644 CBS domain Patl_2521 1399aa2cb9a1e9dc7406f70c1d883c57 143 Pfam PF00571 CBS domain 4 57 1.1E-12 T 11-10-2018 IPR000644 CBS domain Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 735 0.0 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 15 62 2.6E-13 T 11-10-2018 IPR004176 Clp, N-terminal Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 Gene3D G3DSA:3.40.50.300 158 351 1.2E-62 T 11-10-2018 Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 Gene3D G3DSA:1.10.8.60 352 439 3.4E-32 T 11-10-2018 Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 SUPERFAMILY SSF52540 438 728 4.5E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 SUPERFAMILY SSF81923 1 143 1.96E-58 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 303 315 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 SUPERFAMILY SSF52540 168 438 6.24E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 492 510 1.7E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 563 581 1.7E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 596 610 1.7E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 534 552 1.7E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 SMART SM01086 654 743 1.0E-34 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 Pfam PF07724 AAA domain (Cdc48 subfamily) 487 648 1.4E-50 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 SMART SM00382 488 624 4.8E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 SMART SM00382 207 352 9.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 317 4.3E-11 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 Gene3D G3DSA:1.10.8.60 654 755 1.5E-31 T 11-10-2018 Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 654 734 3.6E-24 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 Gene3D G3DSA:1.10.1780.10 1 144 1.8E-41 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 519 537 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 Patl_2374 3cb5d36cbcd42957588ab8de144cfbd2 755 Gene3D G3DSA:3.40.50.300 440 653 5.1E-79 T 11-10-2018 Patl_1449 a5f032a178c7dedee6f6c2bf423c2b92 799 Pfam PF13429 Tetratricopeptide repeat 668 792 5.0E-7 T 11-10-2018 Patl_1449 a5f032a178c7dedee6f6c2bf423c2b92 799 SMART SM00028 700 733 500.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1449 a5f032a178c7dedee6f6c2bf423c2b92 799 SMART SM00028 632 665 1.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1449 a5f032a178c7dedee6f6c2bf423c2b92 799 SMART SM00028 666 699 20.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1449 a5f032a178c7dedee6f6c2bf423c2b92 799 Gene3D G3DSA:1.25.10.110 502 628 3.8E-5 T 11-10-2018 Patl_1449 a5f032a178c7dedee6f6c2bf423c2b92 799 Gene3D G3DSA:1.10.1130.10 180 426 5.8E-16 T 11-10-2018 Patl_1449 a5f032a178c7dedee6f6c2bf423c2b92 799 Pfam PF13435 Cytochrome c554 and c-prime 211 250 3.4E-4 T 11-10-2018 IPR023155 Cytochrome c-552/4 Patl_1449 a5f032a178c7dedee6f6c2bf423c2b92 799 Pfam PF13435 Cytochrome c554 and c-prime 77 103 5.6E-5 T 11-10-2018 IPR023155 Cytochrome c-552/4 Patl_1449 a5f032a178c7dedee6f6c2bf423c2b92 799 Pfam PF13646 HEAT repeats 516 596 3.8E-10 T 11-10-2018 Patl_1449 a5f032a178c7dedee6f6c2bf423c2b92 799 Gene3D G3DSA:1.25.40.10 634 799 8.7E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1449 a5f032a178c7dedee6f6c2bf423c2b92 799 SUPERFAMILY SSF48452 631 799 2.15E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1449 a5f032a178c7dedee6f6c2bf423c2b92 799 SUPERFAMILY SSF48695 72 623 5.82E-58 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily Patl_1449 a5f032a178c7dedee6f6c2bf423c2b92 799 Gene3D G3DSA:1.10.1130.10 69 107 3.5E-7 T 11-10-2018 Patl_1436 ceeadd0f229518e2c52a9dd44d90c196 295 Pfam PF03466 LysR substrate binding domain 89 287 1.7E-41 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_1436 ceeadd0f229518e2c52a9dd44d90c196 295 Gene3D G3DSA:1.10.10.10 2 90 4.8E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1436 ceeadd0f229518e2c52a9dd44d90c196 295 Gene3D G3DSA:3.40.190.290 91 288 3.1E-64 T 11-10-2018 Patl_1436 ceeadd0f229518e2c52a9dd44d90c196 295 SUPERFAMILY SSF53850 89 289 1.99E-43 T 11-10-2018 Patl_1436 ceeadd0f229518e2c52a9dd44d90c196 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 5.6E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1436 ceeadd0f229518e2c52a9dd44d90c196 295 SUPERFAMILY SSF46785 2 88 2.53E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1605 3d5f4c3e890f87fceb3926f754f715f6 282 Gene3D G3DSA:3.90.226.10 23 282 1.2E-87 T 11-10-2018 Patl_1605 3d5f4c3e890f87fceb3926f754f715f6 282 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 37.068 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Patl_1605 3d5f4c3e890f87fceb3926f754f715f6 282 Pfam PF01039 Carboxyl transferase domain 100 237 5.5E-17 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Patl_1605 3d5f4c3e890f87fceb3926f754f715f6 282 SUPERFAMILY SSF52096 23 279 8.08E-87 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_1605 3d5f4c3e890f87fceb3926f754f715f6 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 2.0E-36 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Patl_1605 3d5f4c3e890f87fceb3926f754f715f6 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 2.0E-36 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Patl_1605 3d5f4c3e890f87fceb3926f754f715f6 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 2.0E-36 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Patl_1605 3d5f4c3e890f87fceb3926f754f715f6 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 2.0E-36 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Patl_1605 3d5f4c3e890f87fceb3926f754f715f6 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 2.0E-36 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Patl_1605 3d5f4c3e890f87fceb3926f754f715f6 282 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 281 2.5E-135 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Patl_3353 c7d1809013922a580382edf10ea0a150 693 Gene3D G3DSA:3.40.390.10 54 693 1.9E-240 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Patl_3353 c7d1809013922a580382edf10ea0a150 693 SUPERFAMILY SSF55486 45 693 6.84E-214 T 11-10-2018 Patl_3353 c7d1809013922a580382edf10ea0a150 693 Gene3D G3DSA:1.10.1380.10 85 476 1.9E-240 T 11-10-2018 Patl_3353 c7d1809013922a580382edf10ea0a150 693 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 520 536 2.9E-20 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 Patl_3353 c7d1809013922a580382edf10ea0a150 693 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 481 493 2.9E-20 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 Patl_3353 c7d1809013922a580382edf10ea0a150 693 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 499 511 2.9E-20 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 Patl_3353 c7d1809013922a580382edf10ea0a150 693 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 591 602 2.9E-20 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 Patl_3353 c7d1809013922a580382edf10ea0a150 693 Pfam PF05649 Peptidase family M13 59 437 2.9E-98 T 11-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 Patl_3353 c7d1809013922a580382edf10ea0a150 693 Pfam PF01431 Peptidase family M13 489 690 3.2E-75 T 11-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 Patl_2185 ec7fba63f3c5b8545a0f56d212811c5f 339 SUPERFAMILY SSF53822 78 329 6.42E-52 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Patl_2185 ec7fba63f3c5b8545a0f56d212811c5f 339 Pfam PF13377 Periplasmic binding protein-like domain 178 337 6.8E-32 T 11-10-2018 Patl_2185 ec7fba63f3c5b8545a0f56d212811c5f 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 49 1.2E-14 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_2185 ec7fba63f3c5b8545a0f56d212811c5f 339 Gene3D G3DSA:3.40.50.2300 169 335 1.1E-57 T 11-10-2018 Patl_2185 ec7fba63f3c5b8545a0f56d212811c5f 339 Gene3D G3DSA:3.40.50.2300 81 329 1.1E-57 T 11-10-2018 Patl_2185 ec7fba63f3c5b8545a0f56d212811c5f 339 Gene3D G3DSA:1.10.260.40 1 62 4.3E-19 T 11-10-2018 Patl_2185 ec7fba63f3c5b8545a0f56d212811c5f 339 SMART SM00354 4 77 1.2E-15 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_2185 ec7fba63f3c5b8545a0f56d212811c5f 339 SUPERFAMILY SSF47413 4 62 2.81E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_2024 1ed46dbcc7bd8320c02ed15b3a7c303b 129 Gene3D G3DSA:1.10.1660.10 1 124 5.4E-32 T 11-10-2018 Patl_2024 1ed46dbcc7bd8320c02ed15b3a7c303b 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 6.0E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2024 1ed46dbcc7bd8320c02ed15b3a7c303b 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 6.0E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2024 1ed46dbcc7bd8320c02ed15b3a7c303b 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 6.0E-10 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2024 1ed46dbcc7bd8320c02ed15b3a7c303b 129 SUPERFAMILY SSF46955 1 116 3.55E-31 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Patl_2024 1ed46dbcc7bd8320c02ed15b3a7c303b 129 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2024 1ed46dbcc7bd8320c02ed15b3a7c303b 129 SMART SM00422 1 70 1.8E-25 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2024 1ed46dbcc7bd8320c02ed15b3a7c303b 129 Pfam PF13411 MerR HTH family regulatory protein 1 68 2.2E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 Pfam PF00703 Glycosyl hydrolases family 2 222 337 2.5E-14 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 Gene3D G3DSA:2.60.40.10 626 728 1.6E-22 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 Gene3D G3DSA:2.60.120.260 4 221 7.6E-85 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 Gene3D G3DSA:3.20.20.80 339 625 8.6E-103 T 11-10-2018 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 Pfam PF16353 Domain of unknown function(DUF4981) 641 728 1.6E-17 T 11-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 PRINTS PR00132 Glycosyl hydrolase family 2 signature 348 362 1.8E-35 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 PRINTS PR00132 Glycosyl hydrolase family 2 signature 530 545 1.8E-35 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 PRINTS PR00132 Glycosyl hydrolase family 2 signature 148 163 1.8E-35 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 PRINTS PR00132 Glycosyl hydrolase family 2 signature 379 397 1.8E-35 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 PRINTS PR00132 Glycosyl hydrolase family 2 signature 460 475 1.8E-35 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 Gene3D G3DSA:2.70.98.10 745 1041 6.5E-81 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 Pfam PF02929 Beta galactosidase small chain 763 1040 8.9E-69 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 SUPERFAMILY SSF74650 746 1042 6.28E-80 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 340 630 3.2E-93 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 SUPERFAMILY SSF49785 9 221 5.59E-59 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 389 414 - T 11-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 SMART SM01038 761 1041 8.8E-118 T 11-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 Gene3D G3DSA:2.60.40.10 222 337 2.1E-21 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 51 220 3.8E-38 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 460 474 - T 11-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 SUPERFAMILY SSF49303 623 728 1.15E-21 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 SUPERFAMILY SSF51445 341 626 1.93E-82 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_4065 f88f6ba959d4cae7485b116467026c95 1045 SUPERFAMILY SSF49303 222 337 2.13E-18 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily Patl_1059 ede10795a1c51132efab379da8d646c6 777 Gene3D G3DSA:2.40.170.20 41 777 6.5E-125 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_1059 ede10795a1c51132efab379da8d646c6 777 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 159 1.7E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1059 ede10795a1c51132efab379da8d646c6 777 Pfam PF00593 TonB dependent receptor 271 773 3.7E-34 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1059 ede10795a1c51132efab379da8d646c6 777 SUPERFAMILY SSF56935 32 776 3.4E-107 T 11-10-2018 Patl_1360 f5681193f7ec60b2015748a6c73ecce7 348 Gene3D G3DSA:3.30.160.20 209 304 1.3E-96 T 11-10-2018 Patl_1360 f5681193f7ec60b2015748a6c73ecce7 348 SMART SM00937 68 178 3.2E-57 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 Patl_1360 f5681193f7ec60b2015748a6c73ecce7 348 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Patl_1360 f5681193f7ec60b2015748a6c73ecce7 348 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 346 1.7E-162 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Patl_1360 f5681193f7ec60b2015748a6c73ecce7 348 SUPERFAMILY SSF75620 7 347 9.42E-137 T 11-10-2018 Patl_1360 f5681193f7ec60b2015748a6c73ecce7 348 Gene3D G3DSA:1.20.58.410 1 99 5.1E-29 T 11-10-2018 Patl_1360 f5681193f7ec60b2015748a6c73ecce7 348 Pfam PF03462 PCRF domain 14 203 7.4E-56 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 Patl_1360 f5681193f7ec60b2015748a6c73ecce7 348 Gene3D G3DSA:3.30.70.1660 113 341 1.3E-96 T 11-10-2018 Patl_1360 f5681193f7ec60b2015748a6c73ecce7 348 Pfam PF00472 RF-1 domain 211 320 4.0E-42 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Patl_1360 f5681193f7ec60b2015748a6c73ecce7 348 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 348 38.209 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Patl_0109 b53a1b0c8c5911eff9d0e9dc786876c3 324 Gene3D G3DSA:2.130.10.10 115 324 3.9E-41 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_0109 b53a1b0c8c5911eff9d0e9dc786876c3 324 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 174 188 - T 11-10-2018 IPR019775 WD40 repeat, conserved site Patl_0109 b53a1b0c8c5911eff9d0e9dc786876c3 324 Gene3D G3DSA:2.130.10.10 12 114 1.4E-6 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_0109 b53a1b0c8c5911eff9d0e9dc786876c3 324 SMART SM00320 275 321 360.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 Patl_0109 b53a1b0c8c5911eff9d0e9dc786876c3 324 SMART SM00320 63 104 72.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 Patl_0109 b53a1b0c8c5911eff9d0e9dc786876c3 324 SMART SM00320 148 187 1.5E-5 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 Patl_0109 b53a1b0c8c5911eff9d0e9dc786876c3 324 SMART SM00320 231 272 0.26 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 Patl_0109 b53a1b0c8c5911eff9d0e9dc786876c3 324 SMART SM00320 21 60 2.6 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 Patl_0109 b53a1b0c8c5911eff9d0e9dc786876c3 324 SMART SM00320 107 146 8.4 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 Patl_0109 b53a1b0c8c5911eff9d0e9dc786876c3 324 SMART SM00320 190 228 0.002 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 Patl_0109 b53a1b0c8c5911eff9d0e9dc786876c3 324 Pfam PF08662 Eukaryotic translation initiation factor eIF2A 67 225 5.1E-5 T 11-10-2018 IPR013979 Translation initiation factor, beta propellor-like domain Patl_0109 b53a1b0c8c5911eff9d0e9dc786876c3 324 SUPERFAMILY SSF50998 24 320 5.26E-50 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Patl_2526 c3b521fa6e81f2fc7ff08cc82a67c139 180 ProSitePatterns PS00460 Glutathione peroxidases active site. 47 62 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 Patl_2526 c3b521fa6e81f2fc7ff08cc82a67c139 180 PRINTS PR01011 Glutathione peroxidase family signature 45 62 1.8E-12 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Patl_2526 c3b521fa6e81f2fc7ff08cc82a67c139 180 PRINTS PR01011 Glutathione peroxidase family signature 140 149 1.8E-12 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Patl_2526 c3b521fa6e81f2fc7ff08cc82a67c139 180 PRINTS PR01011 Glutathione peroxidase family signature 80 96 1.8E-12 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Patl_2526 c3b521fa6e81f2fc7ff08cc82a67c139 180 Gene3D G3DSA:3.40.30.10 15 180 2.6E-44 T 11-10-2018 Patl_2526 c3b521fa6e81f2fc7ff08cc82a67c139 180 Pfam PF00255 Glutathione peroxidase 31 132 2.9E-27 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Patl_2526 c3b521fa6e81f2fc7ff08cc82a67c139 180 SUPERFAMILY SSF52833 34 178 4.44E-40 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_2526 c3b521fa6e81f2fc7ff08cc82a67c139 180 PIRSF PIRSF000303 1 180 9.0E-53 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Patl_3842 99ba905cf9ebb352faf987c5feafb32b 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 257 4.7E-54 T 11-10-2018 Patl_3842 99ba905cf9ebb352faf987c5feafb32b 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_3842 99ba905cf9ebb352faf987c5feafb32b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 8.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3842 99ba905cf9ebb352faf987c5feafb32b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 8.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3842 99ba905cf9ebb352faf987c5feafb32b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 8.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3842 99ba905cf9ebb352faf987c5feafb32b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 8.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3842 99ba905cf9ebb352faf987c5feafb32b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 8.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3842 99ba905cf9ebb352faf987c5feafb32b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 8.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3842 99ba905cf9ebb352faf987c5feafb32b 260 Gene3D G3DSA:3.40.50.720 2 257 7.4E-82 T 11-10-2018 Patl_3842 99ba905cf9ebb352faf987c5feafb32b 260 SUPERFAMILY SSF51735 9 258 6.62E-76 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3842 99ba905cf9ebb352faf987c5feafb32b 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 5.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3842 99ba905cf9ebb352faf987c5feafb32b 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 5.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3842 99ba905cf9ebb352faf987c5feafb32b 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 5.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2326 7b974449e61c3e744531d1dd8f418739 257 Gene3D G3DSA:1.10.10.10 10 73 5.4E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2326 7b974449e61c3e744531d1dd8f418739 257 Pfam PF09339 IclR helix-turn-helix domain 14 60 9.7E-12 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Patl_2326 7b974449e61c3e744531d1dd8f418739 257 SUPERFAMILY SSF55781 83 253 7.85E-38 T 11-10-2018 Patl_2326 7b974449e61c3e744531d1dd8f418739 257 SMART SM00346 11 99 2.0E-14 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Patl_2326 7b974449e61c3e744531d1dd8f418739 257 Gene3D G3DSA:3.30.450.40 75 254 1.5E-46 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_2326 7b974449e61c3e744531d1dd8f418739 257 SUPERFAMILY SSF46785 11 83 3.33E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2326 7b974449e61c3e744531d1dd8f418739 257 Pfam PF01614 Bacterial transcriptional regulator 127 248 5.4E-30 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal Patl_3026 8157743f5b5829cb3e4bdd127a8249e5 379 PIRSF PIRSF000876 1 379 2.9E-119 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Patl_3026 8157743f5b5829cb3e4bdd127a8249e5 379 SMART SM00448 3 122 1.3E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3026 8157743f5b5829cb3e4bdd127a8249e5 379 Gene3D G3DSA:3.40.50.2300 2 130 1.1E-31 T 11-10-2018 Patl_3026 8157743f5b5829cb3e4bdd127a8249e5 379 Pfam PF00072 Response regulator receiver domain 5 109 9.9E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3026 8157743f5b5829cb3e4bdd127a8249e5 379 SUPERFAMILY SSF52738 189 376 9.42E-57 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal Patl_3026 8157743f5b5829cb3e4bdd127a8249e5 379 SUPERFAMILY SSF52172 3 109 1.01E-27 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3026 8157743f5b5829cb3e4bdd127a8249e5 379 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 379 37.173 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Patl_3026 8157743f5b5829cb3e4bdd127a8249e5 379 Pfam PF01339 CheB methylesterase 194 369 2.9E-55 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Patl_3026 8157743f5b5829cb3e4bdd127a8249e5 379 Gene3D G3DSA:3.40.50.180 187 377 7.2E-61 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 Gene3D G3DSA:3.50.50.60 216 507 2.1E-106 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 467 489 5.5E-38 T 11-10-2018 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 314 332 5.5E-38 T 11-10-2018 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 218 237 5.5E-38 T 11-10-2018 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 441 457 5.5E-38 T 11-10-2018 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 374 5.5E-38 T 11-10-2018 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 Gene3D G3DSA:3.50.50.60 326 449 2.1E-106 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 216 501 2.8E-43 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 Pfam PF13192 Thioredoxin domain 128 197 6.8E-9 T 11-10-2018 IPR012336 Thioredoxin-like fold Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 SUPERFAMILY SSF51905 206 513 7.78E-50 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 516 1.7E-232 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 SUPERFAMILY SSF52833 107 199 6.14E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 217 239 3.2E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 279 3.2E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 337 349 3.2E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 352 376 3.2E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 404 420 3.2E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 249 264 3.2E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 315 323 3.2E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 477 495 3.2E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 443 464 3.2E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 Gene3D G3DSA:3.40.30.80 1 203 3.1E-59 T 11-10-2018 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 SUPERFAMILY SSF52833 1 104 2.46E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 PIRSF PIRSF000238 1 520 5.6E-246 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 Patl_1067 62cb8520549572ee2f3fd564c2c72efd 535 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 344 364 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Patl_2234 cce7dd6bd4e39cdf90408ef61c789bfd 407 SUPERFAMILY SSF111369 50 273 4.05E-21 T 11-10-2018 Patl_2234 cce7dd6bd4e39cdf90408ef61c789bfd 407 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 274 7.5E-21 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Patl_2234 cce7dd6bd4e39cdf90408ef61c789bfd 407 Gene3D G3DSA:1.10.287.470 95 167 1.5E-45 T 11-10-2018 Patl_2234 cce7dd6bd4e39cdf90408ef61c789bfd 407 Gene3D G3DSA:2.40.30.170 49 279 1.5E-45 T 11-10-2018 Patl_2234 cce7dd6bd4e39cdf90408ef61c789bfd 407 Gene3D G3DSA:2.40.420.20 310 398 1.7E-13 T 11-10-2018 Patl_2234 cce7dd6bd4e39cdf90408ef61c789bfd 407 Gene3D G3DSA:2.40.50.100 61 201 1.5E-45 T 11-10-2018 Patl_2234 cce7dd6bd4e39cdf90408ef61c789bfd 407 Gene3D G3DSA:2.40.420.20 37 48 1.5E-45 T 11-10-2018 Patl_2234 cce7dd6bd4e39cdf90408ef61c789bfd 407 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 280 2.5E-55 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Patl_2630 11a01df1a02cafd045b2ec9be18b385c 96 SUPERFAMILY SSF143011 6 89 7.06E-7 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Patl_2630 11a01df1a02cafd045b2ec9be18b385c 96 Gene3D G3DSA:3.30.2310.20 6 95 2.2E-6 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Patl_2630 11a01df1a02cafd045b2ec9be18b385c 96 Pfam PF15781 ParE-like toxin of type II bacterial toxin-antitoxin system 7 93 1.4E-37 T 11-10-2018 IPR031552 Type II bacterial toxin-antitoxin system, ParE-like toxin Patl_1520 75d146b40c48c18bc6f2b7aaa24cf977 1055 Gene3D G3DSA:2.170.130.10 139 286 2.7E-26 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_1520 75d146b40c48c18bc6f2b7aaa24cf977 1055 SUPERFAMILY SSF56935 144 1055 1.83E-81 T 11-10-2018 Patl_1520 75d146b40c48c18bc6f2b7aaa24cf977 1055 Pfam PF00593 TonB dependent receptor 504 1053 3.6E-36 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1520 75d146b40c48c18bc6f2b7aaa24cf977 1055 Pfam PF07715 TonB-dependent Receptor Plug Domain 161 282 1.2E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1520 75d146b40c48c18bc6f2b7aaa24cf977 1055 Gene3D G3DSA:3.55.50.30 25 132 1.4E-17 T 11-10-2018 Patl_1520 75d146b40c48c18bc6f2b7aaa24cf977 1055 SMART SM00965 55 106 3.7E-7 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Patl_3239 79f02320e3b9561aa9d425858145b1d4 216 Gene3D G3DSA:3.40.50.300 1 215 3.6E-41 T 11-10-2018 Patl_3239 79f02320e3b9561aa9d425858145b1d4 216 SMART SM00382 30 199 9.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3239 79f02320e3b9561aa9d425858145b1d4 216 SUPERFAMILY SSF52540 2 213 6.16E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3239 79f02320e3b9561aa9d425858145b1d4 216 Pfam PF00005 ABC transporter 22 152 4.9E-17 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1818 67e4d1c492dbc3530f38aac8611e1664 692 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 197 285 6.4E-7 T 11-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 Patl_1818 67e4d1c492dbc3530f38aac8611e1664 692 SUPERFAMILY SSF53474 433 682 3.27E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1818 67e4d1c492dbc3530f38aac8611e1664 692 Gene3D G3DSA:3.40.50.1820 420 687 7.5E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1818 67e4d1c492dbc3530f38aac8611e1664 692 Gene3D G3DSA:2.120.10.30 32 174 6.2E-18 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Patl_1818 67e4d1c492dbc3530f38aac8611e1664 692 Gene3D G3DSA:2.120.10.30 186 419 5.8E-28 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Patl_1818 67e4d1c492dbc3530f38aac8611e1664 692 SUPERFAMILY SSF82171 42 424 3.79E-48 T 11-10-2018 Patl_1818 67e4d1c492dbc3530f38aac8611e1664 692 Pfam PF00326 Prolyl oligopeptidase family 475 682 2.6E-52 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Patl_1818 67e4d1c492dbc3530f38aac8611e1664 692 Pfam PF07676 WD40-like Beta Propeller Repeat 140 159 0.0017 T 11-10-2018 IPR011659 WD40-like Beta Propeller Patl_1818 67e4d1c492dbc3530f38aac8611e1664 692 Pfam PF07676 WD40-like Beta Propeller Repeat 83 118 7.3E-5 T 11-10-2018 IPR011659 WD40-like Beta Propeller Patl_1070 a4e0b3badc6399c787489af08b8f151c 469 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 23 469 1.6E-145 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Patl_1070 a4e0b3badc6399c787489af08b8f151c 469 SUPERFAMILY SSF51735 144 271 1.97E-7 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1070 a4e0b3badc6399c787489af08b8f151c 469 Pfam PF02397 Bacterial sugar transferase 279 460 1.6E-64 T 11-10-2018 IPR003362 Bacterial sugar transferase Patl_1070 a4e0b3badc6399c787489af08b8f151c 469 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 24 469 2.0E-162 T 11-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 Patl_1070 a4e0b3badc6399c787489af08b8f151c 469 Pfam PF13727 CoA-binding domain 64 243 9.3E-48 T 11-10-2018 Patl_1070 a4e0b3badc6399c787489af08b8f151c 469 Gene3D G3DSA:3.40.50.720 143 268 6.2E-16 T 11-10-2018 Patl_1448 b74be57136cc60e43c407be20c7802fe 217 Gene3D G3DSA:1.20.1050.10 89 216 2.4E-50 T 11-10-2018 Patl_1448 b74be57136cc60e43c407be20c7802fe 217 Pfam PF14497 Glutathione S-transferase, C-terminal domain 122 201 1.2E-5 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal Patl_1448 b74be57136cc60e43c407be20c7802fe 217 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 80 1.9E-14 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Patl_1448 b74be57136cc60e43c407be20c7802fe 217 Gene3D G3DSA:3.40.30.10 1 88 7.8E-27 T 11-10-2018 Patl_1448 b74be57136cc60e43c407be20c7802fe 217 SUPERFAMILY SSF47616 81 214 3.41E-30 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Patl_1448 b74be57136cc60e43c407be20c7802fe 217 SUPERFAMILY SSF52833 1 89 4.23E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_1448 b74be57136cc60e43c407be20c7802fe 217 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 215 9.7E-84 T 11-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 Patl_0851 62f66e2007e6207d2fe5082423532837 316 SUPERFAMILY SSF46689 210 261 8.06E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0851 62f66e2007e6207d2fe5082423532837 316 SUPERFAMILY SSF46689 263 313 1.7E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0851 62f66e2007e6207d2fe5082423532837 316 Gene3D G3DSA:1.10.10.60 207 315 3.6E-27 T 11-10-2018 Patl_0851 62f66e2007e6207d2fe5082423532837 316 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 264 306 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Patl_0851 62f66e2007e6207d2fe5082423532837 316 Pfam PF12852 Cupin 2 194 1.6E-17 T 11-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain Patl_0851 62f66e2007e6207d2fe5082423532837 316 Pfam PF12833 Helix-turn-helix domain 233 311 2.4E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_0851 62f66e2007e6207d2fe5082423532837 316 SMART SM00342 227 310 2.4E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_4129 2792f0cb7ba21e3431b4b3632b1ce5e6 235 SUPERFAMILY SSF51182 135 223 1.78E-11 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_4129 2792f0cb7ba21e3431b4b3632b1ce5e6 235 Pfam PF12973 ChrR Cupin-like domain 19 109 1.0E-40 T 11-10-2018 IPR025979 ChrR-like cupin domain Patl_4129 2792f0cb7ba21e3431b4b3632b1ce5e6 235 SUPERFAMILY SSF51182 3 121 3.85E-38 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_4129 2792f0cb7ba21e3431b4b3632b1ce5e6 235 Gene3D G3DSA:2.60.120.10 1 228 2.9E-79 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_4142 437838453e3f3c306564484490878936 384 Pfam PF00924 Mechanosensitive ion channel 106 305 2.3E-45 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Patl_4142 437838453e3f3c306564484490878936 384 Gene3D G3DSA:2.30.30.60 164 213 1.3E-11 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Patl_4142 437838453e3f3c306564484490878936 384 SUPERFAMILY SSF82689 216 316 7.59E-23 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Patl_4142 437838453e3f3c306564484490878936 384 Gene3D G3DSA:3.30.70.100 215 308 1.9E-21 T 11-10-2018 Patl_4142 437838453e3f3c306564484490878936 384 SUPERFAMILY SSF50182 148 214 6.54E-15 T 11-10-2018 IPR010920 LSM domain superfamily Patl_3684 5275e59c80cd8a6a14ce86d4a156200f 254 Pfam PF07277 SapC 7 225 1.4E-56 T 11-10-2018 IPR010836 SapC Patl_2225 05a0c2bfd5e770df4a834dbfd689d874 812 Pfam PF00593 TonB dependent receptor 329 811 5.5E-24 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_2225 05a0c2bfd5e770df4a834dbfd689d874 812 SUPERFAMILY SSF56935 33 812 1.28E-76 T 11-10-2018 Patl_2225 05a0c2bfd5e770df4a834dbfd689d874 812 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 163 1.2E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_2225 05a0c2bfd5e770df4a834dbfd689d874 812 ProSitePatterns PS00018 EF-hand calcium-binding domain. 292 304 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Patl_2225 05a0c2bfd5e770df4a834dbfd689d874 812 Gene3D G3DSA:2.170.130.10 58 175 6.7E-14 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_1357 1e555d709b8cc3a5d928cc4d98a4bdd7 326 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 143 164 - T 11-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Patl_1357 1e555d709b8cc3a5d928cc4d98a4bdd7 326 Pfam PF13602 Zinc-binding dehydrogenase 187 323 9.3E-23 T 11-10-2018 Patl_1357 1e555d709b8cc3a5d928cc4d98a4bdd7 326 SUPERFAMILY SSF50129 5 150 1.52E-36 T 11-10-2018 IPR011032 GroES-like superfamily Patl_1357 1e555d709b8cc3a5d928cc4d98a4bdd7 326 Gene3D G3DSA:3.90.180.10 16 310 2.8E-93 T 11-10-2018 Patl_1357 1e555d709b8cc3a5d928cc4d98a4bdd7 326 SMART SM00829 7 323 5.2E-38 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_1357 1e555d709b8cc3a5d928cc4d98a4bdd7 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 85 1.3E-9 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_1357 1e555d709b8cc3a5d928cc4d98a4bdd7 326 Gene3D G3DSA:3.40.50.720 124 292 2.8E-93 T 11-10-2018 Patl_1357 1e555d709b8cc3a5d928cc4d98a4bdd7 326 SUPERFAMILY SSF51735 116 293 1.14E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1001 657238c8c49530c1f2d13fd60e10d966 179 Pfam PF00281 Ribosomal protein L5 24 80 1.2E-27 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1001 657238c8c49530c1f2d13fd60e10d966 179 SUPERFAMILY SSF55282 4 179 5.89E-79 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1001 657238c8c49530c1f2d13fd60e10d966 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.35 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1001 657238c8c49530c1f2d13fd60e10d966 179 Gene3D G3DSA:3.30.1440.10 1 179 1.7E-80 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1001 657238c8c49530c1f2d13fd60e10d966 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1001 657238c8c49530c1f2d13fd60e10d966 179 PIRSF PIRSF002161 1 179 2.6E-67 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1001 657238c8c49530c1f2d13fd60e10d966 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.2E-41 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0035 da95177f7ee02a1f2435466b39fe293e 484 SUPERFAMILY SSF56672 37 244 7.45E-42 T 11-10-2018 Patl_0035 da95177f7ee02a1f2435466b39fe293e 484 Gene3D G3DSA:2.30.40.20 49 85 1.8E-6 T 11-10-2018 Patl_0035 da95177f7ee02a1f2435466b39fe293e 484 Gene3D G3DSA:1.10.150.20 184 231 1.8E-6 T 11-10-2018 Patl_0035 da95177f7ee02a1f2435466b39fe293e 484 Gene3D G3DSA:3.30.70.270 86 183 1.8E-6 T 11-10-2018 Patl_0867 5f2041aa624931e568192ec136f0bbf7 357 Pfam PF00355 Rieske [2Fe-2S] domain 15 95 3.2E-17 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Patl_0867 5f2041aa624931e568192ec136f0bbf7 357 SUPERFAMILY SSF50022 9 121 2.88E-30 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Patl_0867 5f2041aa624931e568192ec136f0bbf7 357 Gene3D G3DSA:3.30.530.90 139 355 6.6E-45 T 11-10-2018 Patl_0867 5f2041aa624931e568192ec136f0bbf7 357 SUPERFAMILY SSF55961 128 353 2.72E-35 T 11-10-2018 Patl_0867 5f2041aa624931e568192ec136f0bbf7 357 Gene3D G3DSA:2.102.10.10 11 138 6.5E-32 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Patl_2973 26803abfb49fb1fe0bae6148c56a89b2 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 7.7E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2973 26803abfb49fb1fe0bae6148c56a89b2 297 SUPERFAMILY SSF46785 3 86 2.58E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2973 26803abfb49fb1fe0bae6148c56a89b2 297 Gene3D G3DSA:3.40.190.290 94 281 1.2E-19 T 11-10-2018 Patl_2973 26803abfb49fb1fe0bae6148c56a89b2 297 Gene3D G3DSA:1.10.10.10 1 90 3.7E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2973 26803abfb49fb1fe0bae6148c56a89b2 297 SUPERFAMILY SSF53850 93 294 1.38E-20 T 11-10-2018 Patl_2973 26803abfb49fb1fe0bae6148c56a89b2 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2973 26803abfb49fb1fe0bae6148c56a89b2 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2973 26803abfb49fb1fe0bae6148c56a89b2 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2973 26803abfb49fb1fe0bae6148c56a89b2 297 Pfam PF03466 LysR substrate binding domain 95 292 9.3E-20 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_1748 95beec512d04adca5e2aa0343428ee28 611 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 267 419 9.1E-67 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain Patl_1748 95beec512d04adca5e2aa0343428ee28 611 SUPERFAMILY SSF100950 181 434 6.84E-75 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Patl_1748 95beec512d04adca5e2aa0343428ee28 611 SUPERFAMILY SSF100950 13 218 5.5E-38 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Patl_1748 95beec512d04adca5e2aa0343428ee28 611 Pfam PF13302 Acetyltransferase (GNAT) domain 457 593 2.9E-10 T 11-10-2018 IPR000182 GNAT domain Patl_1748 95beec512d04adca5e2aa0343428ee28 611 Gene3D G3DSA:3.40.1080.10 8 179 4.0E-55 T 11-10-2018 Patl_1748 95beec512d04adca5e2aa0343428ee28 611 Gene3D G3DSA:3.40.1080.20 285 432 7.5E-64 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily Patl_1748 95beec512d04adca5e2aa0343428ee28 611 Gene3D G3DSA:3.30.750.70 181 284 9.9E-44 T 11-10-2018 Patl_1748 95beec512d04adca5e2aa0343428ee28 611 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 15 174 2.0E-21 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 Patl_1748 95beec512d04adca5e2aa0343428ee28 611 SUPERFAMILY SSF55729 402 595 1.72E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_1748 95beec512d04adca5e2aa0343428ee28 611 Gene3D G3DSA:3.40.630.30 450 611 1.9E-29 T 11-10-2018 Patl_3713 4fbb0fe9381b93468d7995a8f371860b 261 Pfam PF10411 Disulfide bond isomerase protein N-terminus 53 104 2.4E-15 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal Patl_3713 4fbb0fe9381b93468d7995a8f371860b 261 SUPERFAMILY SSF52833 122 259 9.67E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_3713 4fbb0fe9381b93468d7995a8f371860b 261 SUPERFAMILY SSF54423 52 105 2.94E-12 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Patl_3713 4fbb0fe9381b93468d7995a8f371860b 261 Gene3D G3DSA:3.40.30.10 105 260 4.4E-47 T 11-10-2018 Patl_3713 4fbb0fe9381b93468d7995a8f371860b 261 Pfam PF13098 Thioredoxin-like domain 134 256 3.9E-28 T 11-10-2018 IPR012336 Thioredoxin-like fold Patl_3713 4fbb0fe9381b93468d7995a8f371860b 261 Gene3D G3DSA:3.10.450.70 47 104 1.7E-17 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 Patl_3678 32b0622c2c6a8f8caaf58da93c2d46fe 762 Gene3D G3DSA:3.30.365.10 51 184 4.4E-24 T 11-10-2018 Patl_3678 32b0622c2c6a8f8caaf58da93c2d46fe 762 SUPERFAMILY SSF56003 293 760 2.44E-113 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Patl_3678 32b0622c2c6a8f8caaf58da93c2d46fe 762 PIRSF PIRSF036389 1 759 4.2E-220 T 11-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related Patl_3678 32b0622c2c6a8f8caaf58da93c2d46fe 762 SMART SM01008 215 301 9.6E-14 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Patl_3678 32b0622c2c6a8f8caaf58da93c2d46fe 762 Gene3D G3DSA:3.90.1170.50 185 274 3.3E-5 T 11-10-2018 Patl_3678 32b0622c2c6a8f8caaf58da93c2d46fe 762 Gene3D G3DSA:3.30.365.10 586 761 5.0E-40 T 11-10-2018 Patl_3678 32b0622c2c6a8f8caaf58da93c2d46fe 762 Gene3D G3DSA:3.30.365.10 355 446 1.0E-47 T 11-10-2018 Patl_3678 32b0622c2c6a8f8caaf58da93c2d46fe 762 Gene3D G3DSA:3.30.365.10 331 565 1.0E-47 T 11-10-2018 Patl_3678 32b0622c2c6a8f8caaf58da93c2d46fe 762 SUPERFAMILY SSF56003 51 241 5.08E-35 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Patl_3678 32b0622c2c6a8f8caaf58da93c2d46fe 762 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 619 706 3.2E-17 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Patl_3678 32b0622c2c6a8f8caaf58da93c2d46fe 762 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 326 604 1.2E-31 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Patl_3678 32b0622c2c6a8f8caaf58da93c2d46fe 762 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 46 178 6.4E-16 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Patl_1579 99fb9ca32138e0c4736389c7e3d91f24 265 SUPERFAMILY SSF75217 8 250 2.15E-101 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Patl_1579 99fb9ca32138e0c4736389c7e3d91f24 265 Gene3D G3DSA:1.10.1270.20 168 261 5.4E-36 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Patl_1579 99fb9ca32138e0c4736389c7e3d91f24 265 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 8 240 2.7E-103 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Patl_1579 99fb9ca32138e0c4736389c7e3d91f24 265 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 265 114.702 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Patl_1579 99fb9ca32138e0c4736389c7e3d91f24 265 Gene3D G3DSA:3.40.1280.10 5 167 7.7E-68 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Patl_1579 99fb9ca32138e0c4736389c7e3d91f24 265 PIRSF PIRSF000386 8 257 1.4E-102 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Patl_1579 99fb9ca32138e0c4736389c7e3d91f24 265 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 29 227 6.8E-67 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Patl_2200 522aca357b48caca31deaf5db0f0e17f 356 Gene3D G3DSA:3.30.70.2810 1 79 1.1E-26 T 11-10-2018 Patl_2200 522aca357b48caca31deaf5db0f0e17f 356 SUPERFAMILY SSF53335 184 278 8.14E-11 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_2200 522aca357b48caca31deaf5db0f0e17f 356 Gene3D G3DSA:3.30.2300.20 80 174 4.6E-27 T 11-10-2018 Patl_2200 522aca357b48caca31deaf5db0f0e17f 356 PIRSF PIRSF028774 1 356 7.5E-152 T 11-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 Patl_2200 522aca357b48caca31deaf5db0f0e17f 356 Pfam PF01728 FtsJ-like methyltransferase 185 248 1.9E-6 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Patl_2200 522aca357b48caca31deaf5db0f0e17f 356 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 81.305 T 11-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 Patl_2200 522aca357b48caca31deaf5db0f0e17f 356 Gene3D G3DSA:3.40.50.150 175 355 4.9E-52 T 11-10-2018 Patl_1541 a0d4eeb19987b3fe98d2dc0ff13a16bc 366 SUPERFAMILY SSF103263 4 352 3.01E-145 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Patl_1541 a0d4eeb19987b3fe98d2dc0ff13a16bc 366 PIRSF PIRSF001456 3 361 3.9E-138 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Patl_1541 a0d4eeb19987b3fe98d2dc0ff13a16bc 366 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Patl_1541 a0d4eeb19987b3fe98d2dc0ff13a16bc 366 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.444 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Patl_1541 a0d4eeb19987b3fe98d2dc0ff13a16bc 366 Pfam PF01264 Chorismate synthase 10 345 8.9E-140 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Patl_1541 a0d4eeb19987b3fe98d2dc0ff13a16bc 366 Gene3D G3DSA:3.60.150.10 1 362 2.9E-154 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Patl_1541 a0d4eeb19987b3fe98d2dc0ff13a16bc 366 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Patl_1541 a0d4eeb19987b3fe98d2dc0ff13a16bc 366 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.3E-138 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Patl_3716 a6b0940d247da720fa5a4ddf2dacbeb0 370 SMART SM00382 122 247 8.1E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3716 a6b0940d247da720fa5a4ddf2dacbeb0 370 Pfam PF00437 Type II/IV secretion system protein 118 270 1.3E-36 T 11-10-2018 IPR001482 Type II/IV secretion system protein Patl_3716 a6b0940d247da720fa5a4ddf2dacbeb0 370 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 344 1.2E-125 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Patl_3716 a6b0940d247da720fa5a4ddf2dacbeb0 370 SUPERFAMILY SSF52540 4 336 1.27E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3716 a6b0940d247da720fa5a4ddf2dacbeb0 370 Gene3D G3DSA:3.40.50.300 102 355 1.7E-86 T 11-10-2018 Patl_3716 a6b0940d247da720fa5a4ddf2dacbeb0 370 Gene3D G3DSA:3.30.450.90 1 99 5.9E-25 T 11-10-2018 Patl_0061 dd836d6d9d4f10f94df55e4b47d9391b 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 52.557 T 11-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 Patl_0061 dd836d6d9d4f10f94df55e4b47d9391b 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 3.1E-204 T 11-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 Patl_0061 dd836d6d9d4f10f94df55e4b47d9391b 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Patl_0061 dd836d6d9d4f10f94df55e4b47d9391b 398 Gene3D G3DSA:3.90.1150.10 39 387 7.1E-129 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_0061 dd836d6d9d4f10f94df55e4b47d9391b 398 Gene3D G3DSA:3.40.640.10 58 296 7.1E-129 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_0061 dd836d6d9d4f10f94df55e4b47d9391b 398 Pfam PF00155 Aminotransferase class I and II 43 387 2.2E-71 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Patl_0061 dd836d6d9d4f10f94df55e4b47d9391b 398 SUPERFAMILY SSF53383 4 396 3.59E-117 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_2303 ab28e6cbb8116faf6fc135fcd28261ce 418 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 309 4.2E-66 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Patl_2303 ab28e6cbb8116faf6fc135fcd28261ce 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 240 254 5.8E-15 T 11-10-2018 Patl_2303 ab28e6cbb8116faf6fc135fcd28261ce 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 5.8E-15 T 11-10-2018 Patl_2303 ab28e6cbb8116faf6fc135fcd28261ce 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 5.8E-15 T 11-10-2018 Patl_2303 ab28e6cbb8116faf6fc135fcd28261ce 418 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 179 5.8E-15 T 11-10-2018 Patl_2303 ab28e6cbb8116faf6fc135fcd28261ce 418 Pfam PF14759 Reductase C-terminal 328 411 3.5E-26 T 11-10-2018 IPR028202 Reductase, C-terminal Patl_2303 ab28e6cbb8116faf6fc135fcd28261ce 418 Gene3D G3DSA:3.50.50.60 119 246 1.1E-99 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2303 ab28e6cbb8116faf6fc135fcd28261ce 418 SUPERFAMILY SSF55424 324 411 1.21E-22 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Patl_2303 ab28e6cbb8116faf6fc135fcd28261ce 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 2.7E-22 T 11-10-2018 Patl_2303 ab28e6cbb8116faf6fc135fcd28261ce 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 2.7E-22 T 11-10-2018 Patl_2303 ab28e6cbb8116faf6fc135fcd28261ce 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 2.7E-22 T 11-10-2018 Patl_2303 ab28e6cbb8116faf6fc135fcd28261ce 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.7E-22 T 11-10-2018 Patl_2303 ab28e6cbb8116faf6fc135fcd28261ce 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 2.7E-22 T 11-10-2018 Patl_2303 ab28e6cbb8116faf6fc135fcd28261ce 418 SUPERFAMILY SSF51905 5 317 8.17E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2303 ab28e6cbb8116faf6fc135fcd28261ce 418 Gene3D G3DSA:3.30.390.30 328 417 6.0E-29 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Patl_2303 ab28e6cbb8116faf6fc135fcd28261ce 418 Gene3D G3DSA:3.50.50.60 12 317 1.1E-99 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3791 9135f9b88b28fd589f945379b81b0cc1 503 Gene3D G3DSA:3.40.1080.20 344 485 8.0E-39 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily Patl_3791 9135f9b88b28fd589f945379b81b0cc1 503 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 327 470 1.7E-42 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain Patl_3791 9135f9b88b28fd589f945379b81b0cc1 503 SUPERFAMILY SSF100950 232 501 4.19E-83 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Patl_3791 9135f9b88b28fd589f945379b81b0cc1 503 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 12 503 3.2E-250 T 11-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 Patl_3791 9135f9b88b28fd589f945379b81b0cc1 503 Gene3D G3DSA:3.40.1080.10 12 181 1.1E-15 T 11-10-2018 Patl_3791 9135f9b88b28fd589f945379b81b0cc1 503 SUPERFAMILY SSF100950 5 229 4.65E-69 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Patl_3791 9135f9b88b28fd589f945379b81b0cc1 503 Gene3D G3DSA:3.30.750.70 232 317 3.8E-6 T 11-10-2018 Patl_3791 9135f9b88b28fd589f945379b81b0cc1 503 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 13 223 2.3E-30 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 Patl_3596 9838fafdf8fa7cb59b6a474d8d35c665 288 PIRSF PIRSF015558 1 284 1.4E-88 T 11-10-2018 IPR016634 WYL domain protein, s026 type Patl_3596 9838fafdf8fa7cb59b6a474d8d35c665 288 Pfam PF13280 WYL domain 119 201 7.1E-11 T 11-10-2018 IPR026881 WYL domain Patl_2793 266ba836ec804e7d40923016ca414489 546 SUPERFAMILY SSF74650 62 424 2.54E-142 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Patl_2793 266ba836ec804e7d40923016ca414489 546 Gene3D G3DSA:2.60.40.10 436 546 1.5E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2793 266ba836ec804e7d40923016ca414489 546 Gene3D G3DSA:2.70.98.10 60 433 1.3E-159 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Patl_2793 266ba836ec804e7d40923016ca414489 546 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 62 540 1.7E-188 T 11-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 Patl_2793 266ba836ec804e7d40923016ca414489 546 SUPERFAMILY SSF81296 434 543 4.9E-21 T 11-10-2018 IPR014756 Immunoglobulin E-set Patl_2793 266ba836ec804e7d40923016ca414489 546 PIRSF PIRSF006281 14 544 5.3E-183 T 11-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD Patl_0854 8dd386333c4d825389e6ef47364c7c0e 331 Gene3D G3DSA:3.90.850.10 1 328 2.0E-111 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Patl_0854 8dd386333c4d825389e6ef47364c7c0e 331 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 89 322 1.2E-29 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Patl_0854 8dd386333c4d825389e6ef47364c7c0e 331 SUPERFAMILY SSF56529 78 323 1.3E-48 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Patl_3350 e3fbc018823a20856c3045bbe2c2e23a 890 Gene3D G3DSA:3.40.50.970 471 705 5.5E-108 T 11-10-2018 Patl_3350 e3fbc018823a20856c3045bbe2c2e23a 890 Gene3D G3DSA:3.40.50.970 56 470 5.5E-131 T 11-10-2018 Patl_3350 e3fbc018823a20856c3045bbe2c2e23a 890 SUPERFAMILY SSF52922 701 889 1.88E-54 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Patl_3350 e3fbc018823a20856c3045bbe2c2e23a 890 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 132 293 1.1E-7 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Patl_3350 e3fbc018823a20856c3045bbe2c2e23a 890 Gene3D G3DSA:3.40.50.920 706 890 6.5E-67 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Patl_3350 e3fbc018823a20856c3045bbe2c2e23a 890 SUPERFAMILY SSF52518 473 700 1.88E-97 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Patl_3350 e3fbc018823a20856c3045bbe2c2e23a 890 PIRSF PIRSF000156 1 890 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Patl_3350 e3fbc018823a20856c3045bbe2c2e23a 890 SUPERFAMILY SSF52518 57 465 3.47E-141 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Patl_3350 e3fbc018823a20856c3045bbe2c2e23a 890 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 6 889 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Patl_1024 0e41ea30526287c9101fb94d4475f036 623 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 62 77 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site Patl_1024 0e41ea30526287c9101fb94d4475f036 623 SUPERFAMILY SSF54980 320 405 2.95E-14 T 11-10-2018 IPR035647 EF-G domain III/V-like Patl_1024 0e41ea30526287c9101fb94d4475f036 623 SUPERFAMILY SSF52540 15 225 1.91E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1024 0e41ea30526287c9101fb94d4475f036 623 Pfam PF03144 Elongation factor Tu domain 2 237 307 2.3E-8 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Patl_1024 0e41ea30526287c9101fb94d4475f036 623 Gene3D G3DSA:3.30.70.870 324 608 1.1E-127 T 11-10-2018 Patl_1024 0e41ea30526287c9101fb94d4475f036 623 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 23 157 2.2E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Patl_1024 0e41ea30526287c9101fb94d4475f036 623 Gene3D G3DSA:2.40.50.250 501 617 1.1E-127 T 11-10-2018 Patl_1024 0e41ea30526287c9101fb94d4475f036 623 SUPERFAMILY SSF50447 169 317 4.64E-34 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Patl_1024 0e41ea30526287c9101fb94d4475f036 623 Gene3D G3DSA:3.40.50.300 20 216 2.4E-69 T 11-10-2018 Patl_1024 0e41ea30526287c9101fb94d4475f036 623 Gene3D G3DSA:2.40.30.10 217 317 4.6E-33 T 11-10-2018 Patl_1024 0e41ea30526287c9101fb94d4475f036 623 Pfam PF00009 Elongation factor Tu GTP binding domain 22 213 8.3E-57 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1024 0e41ea30526287c9101fb94d4475f036 623 SUPERFAMILY SSF54980 416 530 1.2E-27 T 11-10-2018 IPR035647 EF-G domain III/V-like Patl_1024 0e41ea30526287c9101fb94d4475f036 623 PRINTS PR00315 GTP-binding elongation factor signature 141 150 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1024 0e41ea30526287c9101fb94d4475f036 623 PRINTS PR00315 GTP-binding elongation factor signature 105 116 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1024 0e41ea30526287c9101fb94d4475f036 623 PRINTS PR00315 GTP-binding elongation factor signature 25 38 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1024 0e41ea30526287c9101fb94d4475f036 623 PRINTS PR00315 GTP-binding elongation factor signature 69 77 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1024 0e41ea30526287c9101fb94d4475f036 623 PRINTS PR00315 GTP-binding elongation factor signature 89 99 2.2E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Patl_1024 0e41ea30526287c9101fb94d4475f036 623 Gene3D G3DSA:3.30.70.240 407 500 1.1E-127 T 11-10-2018 Patl_1024 0e41ea30526287c9101fb94d4475f036 623 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 23 617 1.3E-293 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 Patl_1024 0e41ea30526287c9101fb94d4475f036 623 Pfam PF00679 Elongation factor G C-terminus 414 494 1.1E-21 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like Patl_3032 24105e380c76b8d6ea6eef2b08857005 443 SUPERFAMILY SSF52540 225 415 3.57E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3032 24105e380c76b8d6ea6eef2b08857005 443 SMART SM00382 227 434 5.4E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3032 24105e380c76b8d6ea6eef2b08857005 443 SMART SM00962 228 421 1.8E-54 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Patl_3032 24105e380c76b8d6ea6eef2b08857005 443 Gene3D G3DSA:1.20.120.1380 196 412 2.3E-56 T 11-10-2018 Patl_3032 24105e380c76b8d6ea6eef2b08857005 443 Gene3D G3DSA:3.40.50.300 223 409 2.3E-56 T 11-10-2018 Patl_3032 24105e380c76b8d6ea6eef2b08857005 443 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 316 2.3E-82 T 11-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 Patl_3032 24105e380c76b8d6ea6eef2b08857005 443 Pfam PF00448 SRP54-type protein, GTPase domain 231 417 1.9E-40 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Patl_2086 482b14e803697ae0eee3416a5688a30a 121 Gene3D G3DSA:3.40.250.10 4 119 9.7E-19 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Patl_2086 482b14e803697ae0eee3416a5688a30a 121 SMART SM00450 25 119 4.0E-6 T 11-10-2018 IPR001763 Rhodanese-like domain Patl_2086 482b14e803697ae0eee3416a5688a30a 121 Pfam PF00581 Rhodanese-like domain 34 115 4.4E-10 T 11-10-2018 IPR001763 Rhodanese-like domain Patl_2086 482b14e803697ae0eee3416a5688a30a 121 SUPERFAMILY SSF52821 15 112 1.18E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Patl_2599 6513acb3546a41a3015c6e4026107267 1437 SUPERFAMILY SSF52540 950 1186 2.5E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2599 6513acb3546a41a3015c6e4026107267 1437 Gene3D G3DSA:3.40.50.10810 937 1185 9.3E-61 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Patl_2599 6513acb3546a41a3015c6e4026107267 1437 Gene3D G3DSA:3.40.50.300 1193 1394 1.9E-81 T 11-10-2018 Patl_2599 6513acb3546a41a3015c6e4026107267 1437 Gene3D G3DSA:1.20.120.850 1208 1428 1.9E-81 T 11-10-2018 Patl_2599 6513acb3546a41a3015c6e4026107267 1437 SMART SM00487 966 1150 4.0E-25 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_2599 6513acb3546a41a3015c6e4026107267 1437 SUPERFAMILY SSF52540 1188 1435 7.62E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2599 6513acb3546a41a3015c6e4026107267 1437 SMART SM00490 1298 1380 8.9E-26 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_2599 6513acb3546a41a3015c6e4026107267 1437 Pfam PF00271 Helicase conserved C-terminal domain 1269 1380 2.5E-22 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_2599 6513acb3546a41a3015c6e4026107267 1437 Pfam PF00176 SNF2 family N-terminal domain 987 1259 3.8E-57 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Patl_1964 a3cfd72ffba4c8ce8e2c29e97712216e 531 Pfam PF04820 Tryptophan halogenase 10 481 1.9E-110 T 11-10-2018 IPR006905 Flavin-dependent halogenase Patl_1964 a3cfd72ffba4c8ce8e2c29e97712216e 531 Gene3D G3DSA:3.50.50.60 2 527 2.3E-169 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1964 a3cfd72ffba4c8ce8e2c29e97712216e 531 PIRSF PIRSF011396 2 528 2.7E-154 T 11-10-2018 IPR033856 Flavin-dependent tryptophan halogenase Patl_1964 a3cfd72ffba4c8ce8e2c29e97712216e 531 SUPERFAMILY SSF51905 7 448 7.05E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0073 459132f7699b4fe0ba499deafb0972df 279 SUPERFAMILY SSF56091 26 198 1.64E-37 T 11-10-2018 Patl_0073 459132f7699b4fe0ba499deafb0972df 279 Gene3D G3DSA:3.30.470.30 51 150 5.6E-54 T 11-10-2018 Patl_0073 459132f7699b4fe0ba499deafb0972df 279 SUPERFAMILY SSF50249 171 275 2.57E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_0073 459132f7699b4fe0ba499deafb0972df 279 Pfam PF01068 ATP dependent DNA ligase domain 41 197 2.0E-9 T 11-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Patl_0073 459132f7699b4fe0ba499deafb0972df 279 Gene3D G3DSA:3.30.1490.70 31 189 5.6E-54 T 11-10-2018 Patl_0073 459132f7699b4fe0ba499deafb0972df 279 Pfam PF14743 DNA ligase OB-like domain 211 274 2.3E-26 T 11-10-2018 IPR029319 DNA ligase, OB-like domain Patl_0073 459132f7699b4fe0ba499deafb0972df 279 Gene3D G3DSA:2.40.50.140 197 278 3.3E-7 T 11-10-2018 Patl_1893 d74fc60d1afe5ce2568d3cd9bd96e14f 166 SUPERFAMILY SSF54593 35 163 2.1E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_1893 d74fc60d1afe5ce2568d3cd9bd96e14f 166 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 37 159 7.5E-13 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Patl_1893 d74fc60d1afe5ce2568d3cd9bd96e14f 166 Gene3D G3DSA:3.10.180.10 32 166 7.7E-25 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_3542 ae2347799ab4b33ec01633c2f2074822 590 SUPERFAMILY SSF52172 6 143 3.98E-36 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3542 ae2347799ab4b33ec01633c2f2074822 590 Gene3D G3DSA:3.30.70.270 140 332 1.2E-59 T 11-10-2018 Patl_3542 ae2347799ab4b33ec01633c2f2074822 590 Gene3D G3DSA:3.40.50.2300 2 139 1.7E-35 T 11-10-2018 Patl_3542 ae2347799ab4b33ec01633c2f2074822 590 Pfam PF00563 EAL domain 335 569 7.8E-69 T 11-10-2018 IPR001633 EAL domain Patl_3542 ae2347799ab4b33ec01633c2f2074822 590 SMART SM00267 133 319 4.6E-57 T 11-10-2018 IPR000160 GGDEF domain Patl_3542 ae2347799ab4b33ec01633c2f2074822 590 Gene3D G3DSA:3.20.20.450 333 583 1.5E-93 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3542 ae2347799ab4b33ec01633c2f2074822 590 Pfam PF00072 Response regulator receiver domain 9 118 1.0E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3542 ae2347799ab4b33ec01633c2f2074822 590 SMART SM00448 7 120 1.2E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3542 ae2347799ab4b33ec01633c2f2074822 590 SMART SM00052 329 574 9.7E-107 T 11-10-2018 IPR001633 EAL domain Patl_3542 ae2347799ab4b33ec01633c2f2074822 590 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 313 8.1E-45 T 11-10-2018 IPR000160 GGDEF domain Patl_3542 ae2347799ab4b33ec01633c2f2074822 590 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 141 315 1.3E-40 T 11-10-2018 IPR000160 GGDEF domain Patl_3542 ae2347799ab4b33ec01633c2f2074822 590 SUPERFAMILY SSF141868 334 580 5.23E-86 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3542 ae2347799ab4b33ec01633c2f2074822 590 SUPERFAMILY SSF55073 149 321 1.57E-48 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3455 5de6951f2cb1b1196d70410ed8b126fa 430 Gene3D G3DSA:1.20.1250.20 1 193 1.2E-45 T 11-10-2018 Patl_3455 5de6951f2cb1b1196d70410ed8b126fa 430 Pfam PF07690 Major Facilitator Superfamily 17 365 1.6E-49 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_3455 5de6951f2cb1b1196d70410ed8b126fa 430 SUPERFAMILY SSF103473 4 408 1.31E-73 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_3455 5de6951f2cb1b1196d70410ed8b126fa 430 Gene3D G3DSA:1.20.1250.20 211 410 1.4E-21 T 11-10-2018 Patl_2833 6e6d4c0130c2ca678af3b3af52c0f919 395 SUPERFAMILY SSF53686 6 387 5.5E-140 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Patl_2833 6e6d4c0130c2ca678af3b3af52c0f919 395 Gene3D G3DSA:3.40.50.1100 9 204 3.0E-178 T 11-10-2018 Patl_2833 6e6d4c0130c2ca678af3b3af52c0f919 395 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 376 6.1E-48 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Patl_2833 6e6d4c0130c2ca678af3b3af52c0f919 395 Gene3D G3DSA:3.40.50.1100 53 382 3.0E-178 T 11-10-2018 Patl_2833 6e6d4c0130c2ca678af3b3af52c0f919 395 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 389 49.567 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Patl_2833 6e6d4c0130c2ca678af3b3af52c0f919 395 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Patl_2833 6e6d4c0130c2ca678af3b3af52c0f919 395 PIRSF PIRSF001413 2 395 1.1E-160 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Patl_2833 6e6d4c0130c2ca678af3b3af52c0f919 395 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 387 8.8E-189 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Patl_3298 2e00b291a7b9963ff591e108bed5f206 457 PIRSF PIRSF002808 5 453 7.5E-168 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 Patl_3298 2e00b291a7b9963ff591e108bed5f206 457 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 3.9E-226 T 11-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 Patl_3298 2e00b291a7b9963ff591e108bed5f206 457 Gene3D G3DSA:1.20.1250.20 18 227 1.0E-59 T 11-10-2018 Patl_3298 2e00b291a7b9963ff591e108bed5f206 457 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 4.7E-149 T 11-10-2018 Patl_3298 2e00b291a7b9963ff591e108bed5f206 457 Gene3D G3DSA:1.20.1250.20 241 449 3.9E-58 T 11-10-2018 Patl_3298 2e00b291a7b9963ff591e108bed5f206 457 Pfam PF07690 Major Facilitator Superfamily 34 400 4.8E-48 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_3298 2e00b291a7b9963ff591e108bed5f206 457 ProSitePatterns PS00942 glpT family of transporters signature. 154 170 - T 11-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 Patl_3298 2e00b291a7b9963ff591e108bed5f206 457 SUPERFAMILY SSF103473 9 442 3.53E-87 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_0246 99d23ae17dd638c69d76c973ca015425 271 Gene3D G3DSA:3.90.79.10 141 270 3.7E-41 T 11-10-2018 Patl_0246 99d23ae17dd638c69d76c973ca015425 271 Pfam PF00293 NUDIX domain 147 251 4.6E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Patl_0246 99d23ae17dd638c69d76c973ca015425 271 ProSitePatterns PS00893 Nudix box signature. 175 196 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Patl_0246 99d23ae17dd638c69d76c973ca015425 271 SUPERFAMILY SSF55811 5 111 7.1E-18 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Patl_0246 99d23ae17dd638c69d76c973ca015425 271 SUPERFAMILY SSF55811 93 257 2.44E-41 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Patl_0246 99d23ae17dd638c69d76c973ca015425 271 Gene3D G3DSA:3.90.79.20 2 140 1.1E-32 T 11-10-2018 Patl_0246 99d23ae17dd638c69d76c973ca015425 271 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 108 139 9.0E-10 T 11-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 Patl_4252 e21085a557908379bdb455b8cdf5e732 516 SUPERFAMILY SSF52540 200 510 1.38E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4252 e21085a557908379bdb455b8cdf5e732 516 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 329 342 3.4E-5 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Patl_4252 e21085a557908379bdb455b8cdf5e732 516 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 301 315 3.4E-5 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Patl_4252 e21085a557908379bdb455b8cdf5e732 516 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 221 236 3.4E-5 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Patl_4252 e21085a557908379bdb455b8cdf5e732 516 Pfam PF13541 Subunit ChlI of Mg-chelatase 33 154 1.8E-43 T 11-10-2018 Patl_4252 e21085a557908379bdb455b8cdf5e732 516 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 18 504 1.4E-200 T 11-10-2018 IPR004482 Mg chelatase-related protein Patl_4252 e21085a557908379bdb455b8cdf5e732 516 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 414 504 2.6E-28 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain Patl_4252 e21085a557908379bdb455b8cdf5e732 516 Pfam PF01078 Magnesium chelatase, subunit ChlI 202 402 3.6E-91 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain Patl_4252 e21085a557908379bdb455b8cdf5e732 516 SMART SM00382 222 383 6.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_4252 e21085a557908379bdb455b8cdf5e732 516 Gene3D G3DSA:3.30.230.10 32 180 4.7E-8 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Patl_4252 e21085a557908379bdb455b8cdf5e732 516 Gene3D G3DSA:3.40.50.300 197 509 6.3E-59 T 11-10-2018 Patl_4252 e21085a557908379bdb455b8cdf5e732 516 SUPERFAMILY SSF54211 20 179 6.07E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_2571 291bf714caa80158dfd9f5836f430041 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 6.0E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_2571 291bf714caa80158dfd9f5836f430041 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 6.0E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_2571 291bf714caa80158dfd9f5836f430041 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 6.0E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_2571 291bf714caa80158dfd9f5836f430041 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.0E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_2571 291bf714caa80158dfd9f5836f430041 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 9.7E-38 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Patl_2571 291bf714caa80158dfd9f5836f430041 363 SUPERFAMILY SSF52540 3 301 1.3E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2571 291bf714caa80158dfd9f5836f430041 363 SUPERFAMILY SSF81271 279 360 1.68E-35 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Patl_2571 291bf714caa80158dfd9f5836f430041 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 1.3E-165 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Patl_2571 291bf714caa80158dfd9f5836f430041 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.649 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Patl_2571 291bf714caa80158dfd9f5836f430041 363 Gene3D G3DSA:3.40.50.300 4 278 6.9E-151 T 11-10-2018 Patl_2571 291bf714caa80158dfd9f5836f430041 363 Gene3D G3DSA:3.10.20.30 48 362 6.9E-151 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_2571 291bf714caa80158dfd9f5836f430041 363 Gene3D G3DSA:1.10.150.300 120 200 6.9E-151 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Patl_2571 291bf714caa80158dfd9f5836f430041 363 PIRSF PIRSF006641 1 363 5.8E-156 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Patl_2571 291bf714caa80158dfd9f5836f430041 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 9.1E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_4310 84906de9b52bc336f173efd284661b94 460 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 222 376 3.7E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Patl_4310 84906de9b52bc336f173efd284661b94 460 Pfam PF01926 50S ribosome-binding GTPase 224 315 6.7E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_4310 84906de9b52bc336f173efd284661b94 460 Gene3D G3DSA:3.30.1360.120 2 127 2.2E-36 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Patl_4310 84906de9b52bc336f173efd284661b94 460 Gene3D G3DSA:1.20.120.430 128 460 2.2E-104 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 Patl_4310 84906de9b52bc336f173efd284661b94 460 SUPERFAMILY SSF116878 127 460 2.09E-51 T 11-10-2018 Patl_4310 84906de9b52bc336f173efd284661b94 460 Pfam PF12631 MnmE helical domain 129 457 8.7E-60 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 Patl_4310 84906de9b52bc336f173efd284661b94 460 Pfam PF10396 GTP-binding protein TrmE N-terminus 12 126 5.2E-33 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 Patl_4310 84906de9b52bc336f173efd284661b94 460 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 11 460 32.321 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Patl_4310 84906de9b52bc336f173efd284661b94 460 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 17 460 2.9E-102 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Patl_4310 84906de9b52bc336f173efd284661b94 460 Gene3D G3DSA:3.40.50.300 223 388 2.2E-104 T 11-10-2018 Patl_4310 84906de9b52bc336f173efd284661b94 460 SUPERFAMILY SSF52540 77 378 6.77E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1537 446bf8e24137fe9ac463370143039998 272 Gene3D G3DSA:1.10.1660.10 88 141 1.1E-6 T 11-10-2018 Patl_1537 446bf8e24137fe9ac463370143039998 272 Gene3D G3DSA:3.40.50.2300 148 272 4.8E-26 T 11-10-2018 Patl_1537 446bf8e24137fe9ac463370143039998 272 Pfam PF00072 Response regulator receiver domain 156 266 1.6E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1537 446bf8e24137fe9ac463370143039998 272 SUPERFAMILY SSF46955 90 142 2.2E-7 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Patl_1537 446bf8e24137fe9ac463370143039998 272 SUPERFAMILY SSF52172 153 270 4.13E-25 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1537 446bf8e24137fe9ac463370143039998 272 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 90 138 3.6E-9 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Patl_1537 446bf8e24137fe9ac463370143039998 272 SMART SM00448 154 266 5.9E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1537 446bf8e24137fe9ac463370143039998 272 Pfam PF12728 Helix-turn-helix domain 91 141 5.1E-10 T 11-10-2018 Patl_1236 cec522685120485857d0962a77a7ffe1 267 Gene3D G3DSA:1.10.3130.10 1 66 5.9E-24 T 11-10-2018 Patl_1236 cec522685120485857d0962a77a7ffe1 267 SUPERFAMILY SSF51161 2 168 2.22E-54 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Patl_1236 cec522685120485857d0962a77a7ffe1 267 Gene3D G3DSA:2.160.10.10 67 189 3.2E-35 T 11-10-2018 Patl_1236 cec522685120485857d0962a77a7ffe1 267 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 5 166 4.3E-77 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Patl_1236 cec522685120485857d0962a77a7ffe1 267 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 150 4.8E-6 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_1236 cec522685120485857d0962a77a7ffe1 267 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 2.1E-4 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_2129 e8e39d7d2f50721c44f16bc54ffb5d0a 286 Gene3D G3DSA:3.40.50.720 3 273 4.6E-107 T 11-10-2018 Patl_2129 e8e39d7d2f50721c44f16bc54ffb5d0a 286 SUPERFAMILY SSF51735 2 285 3.12E-98 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2129 e8e39d7d2f50721c44f16bc54ffb5d0a 286 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 285 1.6E-107 T 11-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Patl_2129 e8e39d7d2f50721c44f16bc54ffb5d0a 286 Pfam PF04321 RmlD substrate binding domain 2 285 7.6E-104 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Patl_2129 e8e39d7d2f50721c44f16bc54ffb5d0a 286 Gene3D G3DSA:3.90.25.10 159 280 4.6E-107 T 11-10-2018 Patl_3127 b5b4d4c46c97e8c937c31c4ae766efbc 345 SMART SM00530 19 76 2.0E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_3127 b5b4d4c46c97e8c937c31c4ae766efbc 345 Pfam PF13464 Domain of unknown function (DUF4115) 269 342 7.4E-17 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 Patl_3127 b5b4d4c46c97e8c937c31c4ae766efbc 345 Pfam PF13413 Helix-turn-helix domain 20 79 5.7E-15 T 11-10-2018 Patl_3127 b5b4d4c46c97e8c937c31c4ae766efbc 345 Gene3D G3DSA:1.10.260.40 4 113 5.1E-18 T 11-10-2018 Patl_3127 b5b4d4c46c97e8c937c31c4ae766efbc 345 SUPERFAMILY SSF47413 17 83 7.88E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_2942 684d56e2b60dd9b344f1a811db311673 236 TIGRFAM TIGR02796 tolQ: protein TolQ 6 219 1.1E-92 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Patl_2942 684d56e2b60dd9b344f1a811db311673 236 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 224 44.457 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 Patl_2942 684d56e2b60dd9b344f1a811db311673 236 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 206 2.8E-42 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Patl_1600 330e3c475e8c7cdd010b27931b6b572c 114 Gene3D G3DSA:1.10.238.10 50 109 4.8E-9 T 11-10-2018 Patl_1600 330e3c475e8c7cdd010b27931b6b572c 114 Pfam PF13202 EF hand 83 103 8.0E-6 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 Patl_1600 330e3c475e8c7cdd010b27931b6b572c 114 Pfam PF13202 EF hand 56 73 0.0038 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 Patl_1600 330e3c475e8c7cdd010b27931b6b572c 114 ProSitePatterns PS00018 EF-hand calcium-binding domain. 88 100 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Patl_1600 330e3c475e8c7cdd010b27931b6b572c 114 SUPERFAMILY SSF47473 42 102 2.76E-9 T 11-10-2018 IPR011992 EF-hand domain pair Patl_0842 29eb0d6344747138ccf92202e65d53f0 546 SUPERFAMILY SSF75005 28 341 3.01E-76 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Patl_0842 29eb0d6344747138ccf92202e65d53f0 546 Gene3D G3DSA:2.115.10.20 27 332 3.6E-80 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Patl_0842 29eb0d6344747138ccf92202e65d53f0 546 Pfam PF04616 Glycosyl hydrolases family 43 28 313 4.9E-79 T 11-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Patl_0842 29eb0d6344747138ccf92202e65d53f0 546 SUPERFAMILY SSF49899 346 543 5.14E-42 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Patl_0842 29eb0d6344747138ccf92202e65d53f0 546 Gene3D G3DSA:2.60.120.200 348 545 6.5E-41 T 11-10-2018 Patl_1753 763ab45660b9f6d484f9d1a95ae567ae 333 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 333 4.3E-152 T 11-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 Patl_1753 763ab45660b9f6d484f9d1a95ae567ae 333 SUPERFAMILY SSF51735 116 281 1.73E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1753 763ab45660b9f6d484f9d1a95ae567ae 333 Gene3D G3DSA:3.40.50.720 127 269 1.0E-100 T 11-10-2018 Patl_1753 763ab45660b9f6d484f9d1a95ae567ae 333 SMART SM00829 13 330 8.3E-11 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_1753 763ab45660b9f6d484f9d1a95ae567ae 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 90 2.0E-6 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_1753 763ab45660b9f6d484f9d1a95ae567ae 333 Pfam PF13602 Zinc-binding dehydrogenase 190 330 2.2E-21 T 11-10-2018 Patl_1753 763ab45660b9f6d484f9d1a95ae567ae 333 Gene3D G3DSA:3.90.180.10 24 330 1.0E-100 T 11-10-2018 Patl_1753 763ab45660b9f6d484f9d1a95ae567ae 333 SUPERFAMILY SSF50129 1 142 3.3E-31 T 11-10-2018 IPR011032 GroES-like superfamily Patl_2569 e218a54ebac4c4704d482c14dbf8efea 213 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 176 8.9E-44 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Patl_2569 e218a54ebac4c4704d482c14dbf8efea 213 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 9 98 8.0E-47 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Patl_2569 e218a54ebac4c4704d482c14dbf8efea 213 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 193 5.8E-28 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain Patl_2569 e218a54ebac4c4704d482c14dbf8efea 213 Gene3D G3DSA:2.170.120.20 101 199 1.8E-24 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal Patl_2569 e218a54ebac4c4704d482c14dbf8efea 213 SUPERFAMILY SSF50715 6 194 3.49E-55 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Patl_2569 e218a54ebac4c4704d482c14dbf8efea 213 Pfam PF01386 Ribosomal L25p family 8 95 1.2E-25 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Patl_2569 e218a54ebac4c4704d482c14dbf8efea 213 Gene3D G3DSA:2.40.240.10 5 98 9.1E-34 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Patl_2569 e218a54ebac4c4704d482c14dbf8efea 213 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 6 98 25.765 T 11-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Patl_2569 e218a54ebac4c4704d482c14dbf8efea 213 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 6 192 30.815 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Patl_3590 19c48727c90bd8bbfbdfd86050cb1085 969 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 20 960 0.0 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Patl_3590 19c48727c90bd8bbfbdfd86050cb1085 969 SUPERFAMILY SSF53383 490 961 1.12E-93 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_3590 19c48727c90bd8bbfbdfd86050cb1085 969 Gene3D G3DSA:3.40.640.10 98 357 5.0E-103 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_3590 19c48727c90bd8bbfbdfd86050cb1085 969 Gene3D G3DSA:3.40.640.10 533 763 6.2E-61 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_3590 19c48727c90bd8bbfbdfd86050cb1085 969 Pfam PF02347 Glycine cleavage system P-protein 469 756 6.4E-10 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Patl_3590 19c48727c90bd8bbfbdfd86050cb1085 969 Pfam PF02347 Glycine cleavage system P-protein 19 446 2.1E-179 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Patl_3590 19c48727c90bd8bbfbdfd86050cb1085 969 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 11 966 25.253 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Patl_3590 19c48727c90bd8bbfbdfd86050cb1085 969 SUPERFAMILY SSF53383 20 446 2.45E-99 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_3590 19c48727c90bd8bbfbdfd86050cb1085 969 Gene3D G3DSA:3.90.1150.10 774 910 5.0E-40 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_3415 9161f73c50f78eeb53660803910351cc 284 Gene3D G3DSA:1.10.3680.10 41 193 7.1E-26 T 11-10-2018 IPR029024 TerB-like Patl_3415 9161f73c50f78eeb53660803910351cc 284 PRINTS PR00625 DnaJ domain signature 220 238 3.9E-9 T 11-10-2018 IPR001623 DnaJ domain Patl_3415 9161f73c50f78eeb53660803910351cc 284 PRINTS PR00625 DnaJ domain signature 238 253 3.9E-9 T 11-10-2018 IPR001623 DnaJ domain Patl_3415 9161f73c50f78eeb53660803910351cc 284 PRINTS PR00625 DnaJ domain signature 262 282 3.9E-9 T 11-10-2018 IPR001623 DnaJ domain Patl_3415 9161f73c50f78eeb53660803910351cc 284 SUPERFAMILY SSF46565 210 279 9.12E-16 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Patl_3415 9161f73c50f78eeb53660803910351cc 284 Gene3D G3DSA:1.10.287.110 194 283 1.6E-15 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Patl_3415 9161f73c50f78eeb53660803910351cc 284 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 1 283 38.372 T 11-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 Patl_3415 9161f73c50f78eeb53660803910351cc 284 SUPERFAMILY SSF158682 3 232 4.71E-28 T 11-10-2018 IPR029024 TerB-like Patl_3415 9161f73c50f78eeb53660803910351cc 284 Pfam PF05099 Tellurite resistance protein TerB 51 173 9.7E-18 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal Patl_3415 9161f73c50f78eeb53660803910351cc 284 Pfam PF00226 DnaJ domain 218 279 1.4E-11 T 11-10-2018 IPR001623 DnaJ domain Patl_3415 9161f73c50f78eeb53660803910351cc 284 SMART SM00271 217 282 3.2E-11 T 11-10-2018 IPR001623 DnaJ domain Patl_3147 22be1c1f8510ce7337a793dc60aa88a7 213 PIRSF PIRSF000190 1 213 2.3E-77 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Patl_3147 22be1c1f8510ce7337a793dc60aa88a7 213 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 10 213 37.223 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Patl_3147 22be1c1f8510ce7337a793dc60aa88a7 213 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 172 213 7.3E-19 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Patl_3147 22be1c1f8510ce7337a793dc60aa88a7 213 Gene3D G3DSA:2.30.110.10 2 213 8.3E-73 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Patl_3147 22be1c1f8510ce7337a793dc60aa88a7 213 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 4 213 6.5E-79 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Patl_3147 22be1c1f8510ce7337a793dc60aa88a7 213 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 34 118 2.2E-19 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Patl_3147 22be1c1f8510ce7337a793dc60aa88a7 213 SUPERFAMILY SSF50475 15 213 1.22E-62 T 11-10-2018 Patl_3147 22be1c1f8510ce7337a793dc60aa88a7 213 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 182 195 - T 11-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Patl_0797 c46e6570347dacf2144c494899c5a19b 338 Gene3D G3DSA:3.40.50.720 146 281 2.7E-84 T 11-10-2018 Patl_0797 c46e6570347dacf2144c494899c5a19b 338 Pfam PF00107 Zinc-binding dehydrogenase 169 293 8.3E-21 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_0797 c46e6570347dacf2144c494899c5a19b 338 SUPERFAMILY SSF51735 134 299 2.76E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0797 c46e6570347dacf2144c494899c5a19b 338 SUPERFAMILY SSF50129 1 168 5.97E-47 T 11-10-2018 IPR011032 GroES-like superfamily Patl_0797 c46e6570347dacf2144c494899c5a19b 338 Gene3D G3DSA:3.90.180.10 13 320 2.7E-84 T 11-10-2018 Patl_0797 c46e6570347dacf2144c494899c5a19b 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 128 1.4E-31 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_0797 c46e6570347dacf2144c494899c5a19b 338 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Patl_1612 6bbcbf6c185ffa2a6a6bac99279585c2 935 Pfam PF00005 ABC transporter 291 434 2.1E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1612 6bbcbf6c185ffa2a6a6bac99279585c2 935 Gene3D G3DSA:3.40.50.300 266 513 2.0E-59 T 11-10-2018 Patl_1612 6bbcbf6c185ffa2a6a6bac99279585c2 935 Pfam PF12698 ABC-2 family transporter protein 588 927 1.2E-36 T 11-10-2018 Patl_1612 6bbcbf6c185ffa2a6a6bac99279585c2 935 Pfam PF00005 ABC transporter 26 173 1.5E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1612 6bbcbf6c185ffa2a6a6bac99279585c2 935 Gene3D G3DSA:3.40.50.300 2 248 3.5E-56 T 11-10-2018 Patl_1612 6bbcbf6c185ffa2a6a6bac99279585c2 935 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_1612 6bbcbf6c185ffa2a6a6bac99279585c2 935 SMART SM00382 35 256 0.0023 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1612 6bbcbf6c185ffa2a6a6bac99279585c2 935 SMART SM00382 299 490 5.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1612 6bbcbf6c185ffa2a6a6bac99279585c2 935 SUPERFAMILY SSF52540 271 495 1.22E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1612 6bbcbf6c185ffa2a6a6bac99279585c2 935 SUPERFAMILY SSF52540 13 236 1.69E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3603 ae3664b50ee398a018bff1a2dbacfa90 310 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 10 299 5.3E-76 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Patl_3603 ae3664b50ee398a018bff1a2dbacfa90 310 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 309 46.473 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 Patl_3603 ae3664b50ee398a018bff1a2dbacfa90 310 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 309 5.3E-113 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 Patl_3603 ae3664b50ee398a018bff1a2dbacfa90 310 PIRSF PIRSF026649 6 308 3.6E-86 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Patl_2898 99ac4436b001871aeb408e492c278996 178 SUPERFAMILY SSF53271 6 175 1.21E-49 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Patl_2898 99ac4436b001871aeb408e492c278996 178 Pfam PF00156 Phosphoribosyl transferase domain 28 141 1.9E-12 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Patl_2898 99ac4436b001871aeb408e492c278996 178 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 6 175 36.387 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Patl_2898 99ac4436b001871aeb408e492c278996 178 Gene3D G3DSA:3.40.50.2020 2 178 1.7E-62 T 11-10-2018 Patl_2898 99ac4436b001871aeb408e492c278996 178 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 6 174 1.9E-66 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 Patl_2384 e7264e8006f28e05fbb2a4b7e881a309 280 PIRSF PIRSF028200 2 280 6.1E-67 T 11-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 Patl_0844 0ecab2eaa99bf9fcd75c5caa6171a878 349 Gene3D G3DSA:2.102.10.10 7 134 1.7E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Patl_0844 0ecab2eaa99bf9fcd75c5caa6171a878 349 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 51 73 - T 11-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 Patl_0844 0ecab2eaa99bf9fcd75c5caa6171a878 349 SUPERFAMILY SSF50022 6 115 2.36E-28 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Patl_0844 0ecab2eaa99bf9fcd75c5caa6171a878 349 SUPERFAMILY SSF55961 121 346 9.77E-55 T 11-10-2018 Patl_0844 0ecab2eaa99bf9fcd75c5caa6171a878 349 Gene3D G3DSA:3.30.530.90 135 349 7.0E-64 T 11-10-2018 Patl_0844 0ecab2eaa99bf9fcd75c5caa6171a878 349 Pfam PF00355 Rieske [2Fe-2S] domain 10 93 2.2E-16 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Patl_0667 80834628e37707633a0aff29a4aaaa97 580 Gene3D G3DSA:3.55.50.30 136 262 3.0E-41 T 11-10-2018 Patl_0667 80834628e37707633a0aff29a4aaaa97 580 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 165 573 4.2E-153 T 11-10-2018 IPR013355 Type IV pilus secretin PilQ Patl_0667 80834628e37707633a0aff29a4aaaa97 580 PRINTS PR00811 Bacterial general secretion pathway protein D signature 411 435 8.8E-19 T 11-10-2018 IPR001775 GspD/PilQ family Patl_0667 80834628e37707633a0aff29a4aaaa97 580 PRINTS PR00811 Bacterial general secretion pathway protein D signature 538 556 8.8E-19 T 11-10-2018 IPR001775 GspD/PilQ family Patl_0667 80834628e37707633a0aff29a4aaaa97 580 PRINTS PR00811 Bacterial general secretion pathway protein D signature 328 338 8.8E-19 T 11-10-2018 IPR001775 GspD/PilQ family Patl_0667 80834628e37707633a0aff29a4aaaa97 580 PRINTS PR00811 Bacterial general secretion pathway protein D signature 561 575 8.8E-19 T 11-10-2018 IPR001775 GspD/PilQ family Patl_0667 80834628e37707633a0aff29a4aaaa97 580 Pfam PF07660 Secretin and TonB N terminus short domain 192 237 3.7E-8 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Patl_0667 80834628e37707633a0aff29a4aaaa97 580 Pfam PF03958 Bacterial type II/III secretion system short domain 266 328 8.5E-13 T 11-10-2018 IPR005644 NolW-like Patl_0667 80834628e37707633a0aff29a4aaaa97 580 SMART SM00965 190 238 7.4E-8 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Patl_0667 80834628e37707633a0aff29a4aaaa97 580 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 519 552 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 Patl_0667 80834628e37707633a0aff29a4aaaa97 580 Gene3D G3DSA:3.30.1370.120 265 327 3.8E-10 T 11-10-2018 IPR038591 NolW-like superfamily Patl_0667 80834628e37707633a0aff29a4aaaa97 580 Pfam PF00263 Bacterial type II and III secretion system protein 415 573 3.0E-48 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 Patl_2985 7a6366144bbb40f8df595b8b48bfe72d 419 SUPERFAMILY SSF48452 131 391 9.76E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2985 7a6366144bbb40f8df595b8b48bfe72d 419 SMART SM00028 297 330 2.9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2985 7a6366144bbb40f8df595b8b48bfe72d 419 SMART SM00028 157 190 8.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2985 7a6366144bbb40f8df595b8b48bfe72d 419 SMART SM00028 331 363 110.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2985 7a6366144bbb40f8df595b8b48bfe72d 419 Pfam PF13432 Tetratricopeptide repeat 335 379 0.0049 T 11-10-2018 Patl_2985 7a6366144bbb40f8df595b8b48bfe72d 419 Gene3D G3DSA:1.25.40.10 36 290 1.4E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2985 7a6366144bbb40f8df595b8b48bfe72d 419 Gene3D G3DSA:1.25.40.10 295 415 2.5E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3071 d9195c9a361d1f48bfa82d6bc5d270c2 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 2.0E-55 T 11-10-2018 Patl_3071 d9195c9a361d1f48bfa82d6bc5d270c2 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 180 0.0013 T 11-10-2018 Patl_3071 d9195c9a361d1f48bfa82d6bc5d270c2 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 7.8E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3071 d9195c9a361d1f48bfa82d6bc5d270c2 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 7.8E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3071 d9195c9a361d1f48bfa82d6bc5d270c2 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 7.8E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3071 d9195c9a361d1f48bfa82d6bc5d270c2 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 7.8E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3071 d9195c9a361d1f48bfa82d6bc5d270c2 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 7.8E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3071 d9195c9a361d1f48bfa82d6bc5d270c2 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.8E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3071 d9195c9a361d1f48bfa82d6bc5d270c2 241 SUPERFAMILY SSF51735 4 240 6.42E-71 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3071 d9195c9a361d1f48bfa82d6bc5d270c2 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_3071 d9195c9a361d1f48bfa82d6bc5d270c2 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 7.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3071 d9195c9a361d1f48bfa82d6bc5d270c2 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 7.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3071 d9195c9a361d1f48bfa82d6bc5d270c2 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 7.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3071 d9195c9a361d1f48bfa82d6bc5d270c2 241 Gene3D G3DSA:3.40.50.720 2 241 9.7E-75 T 11-10-2018 Patl_3862 6461854e396485d2244d81dccbec116f 294 Pfam PF04018 Domain of unknown function (DUF368) 1 245 8.4E-96 T 11-10-2018 IPR007163 Protein of unknown function DUF368 Patl_2635 c0502034435cc47b4341ac33acc50acb 180 SUPERFAMILY SSF54593 22 168 6.6E-35 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2635 c0502034435cc47b4341ac33acc50acb 180 ProSitePatterns PS00934 Glyoxalase I signature 1. 26 47 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Patl_2635 c0502034435cc47b4341ac33acc50acb 180 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 12 174 8.8E-51 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Patl_2635 c0502034435cc47b4341ac33acc50acb 180 Gene3D G3DSA:3.10.180.10 2 175 3.9E-62 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2635 c0502034435cc47b4341ac33acc50acb 180 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 25 166 1.9E-21 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Patl_1150 e37a829ac1736d55092e37201af8e8d7 379 SUPERFAMILY SSF55874 252 375 7.03E-11 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1150 e37a829ac1736d55092e37201af8e8d7 379 Pfam PF06580 Histidine kinase 176 256 4.5E-23 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Patl_1150 e37a829ac1736d55092e37201af8e8d7 379 Gene3D G3DSA:3.30.565.10 232 378 3.0E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3124 6e34e5ce3fc2ad68da2b5cb92a9ed806 207 PIRSF PIRSF006170 1 206 2.1E-54 T 11-10-2018 IPR026039 Uncharacterised protein family UPF0070 Patl_3124 6e34e5ce3fc2ad68da2b5cb92a9ed806 207 Pfam PF09976 Tetratricopeptide repeat-like domain 15 202 2.0E-57 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 Patl_3124 6e34e5ce3fc2ad68da2b5cb92a9ed806 207 SUPERFAMILY SSF48452 91 195 1.97E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3124 6e34e5ce3fc2ad68da2b5cb92a9ed806 207 Gene3D G3DSA:1.25.40.10 6 204 9.7E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1508 19a3cbe2377f334b3157718efd4689ac 101 Pfam PF03795 YCII-related domain 12 87 5.2E-9 T 11-10-2018 IPR005545 YCII-related Patl_1508 19a3cbe2377f334b3157718efd4689ac 101 Gene3D G3DSA:3.30.70.1060 1 92 4.0E-18 T 11-10-2018 Patl_1508 19a3cbe2377f334b3157718efd4689ac 101 SUPERFAMILY SSF54909 10 87 5.09E-15 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_1428 b046fd2c37c9737ce49ed404ea675cd8 302 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 29 276 2.6E-91 T 11-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Patl_1428 b046fd2c37c9737ce49ed404ea675cd8 302 Gene3D G3DSA:3.40.50.11240 89 275 2.8E-63 T 11-10-2018 Patl_1428 b046fd2c37c9737ce49ed404ea675cd8 302 Gene3D G3DSA:1.10.30.40 23 72 1.5E-8 T 11-10-2018 Patl_1428 b046fd2c37c9737ce49ed404ea675cd8 302 PIRSF PIRSF018982 11 288 1.3E-88 T 11-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Patl_3744 73572a6986956fc250ff1655a7f16b38 150 SUPERFAMILY SSF55653 60 148 3.27E-23 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Patl_3744 73572a6986956fc250ff1655a7f16b38 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 24.788 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_3744 73572a6986956fc250ff1655a7f16b38 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3744 73572a6986956fc250ff1655a7f16b38 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 5.6E-50 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_3744 73572a6986956fc250ff1655a7f16b38 150 SUPERFAMILY SSF55658 1 57 9.77E-18 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Patl_3744 73572a6986956fc250ff1655a7f16b38 150 Gene3D G3DSA:3.10.430.100 61 149 1.0E-27 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Patl_3744 73572a6986956fc250ff1655a7f16b38 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 6.0E-23 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal Patl_3744 73572a6986956fc250ff1655a7f16b38 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 5.7E-20 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3744 73572a6986956fc250ff1655a7f16b38 150 Gene3D G3DSA:3.40.5.10 1 50 1.6E-22 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3619 a934e85e87dfeb71fee0f372b7b9c5a6 255 SUPERFAMILY SSF47413 5 65 8.61E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_3619 a934e85e87dfeb71fee0f372b7b9c5a6 255 SMART SM00530 10 64 1.8E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_3619 a934e85e87dfeb71fee0f372b7b9c5a6 255 Gene3D G3DSA:1.10.260.40 2 69 5.5E-9 T 11-10-2018 Patl_3619 a934e85e87dfeb71fee0f372b7b9c5a6 255 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 67 1.7E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_2880 7839afb74ca561fe0464bd780beea246 299 Gene3D G3DSA:3.40.190.10 7 221 7.0E-67 T 11-10-2018 Patl_2880 7839afb74ca561fe0464bd780beea246 299 Pfam PF08029 HisG, C-terminal domain 223 296 1.3E-23 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Patl_2880 7839afb74ca561fe0464bd780beea246 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 Patl_2880 7839afb74ca561fe0464bd780beea246 299 Gene3D G3DSA:3.30.70.120 226 298 6.4E-32 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Patl_2880 7839afb74ca561fe0464bd780beea246 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 33.806 T 11-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Patl_2880 7839afb74ca561fe0464bd780beea246 299 SUPERFAMILY SSF53850 6 223 2.17E-64 T 11-10-2018 Patl_2880 7839afb74ca561fe0464bd780beea246 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 202 298 2.3E-28 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Patl_2880 7839afb74ca561fe0464bd780beea246 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 1.7E-53 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Patl_2880 7839afb74ca561fe0464bd780beea246 299 Pfam PF01634 ATP phosphoribosyltransferase 54 217 1.1E-44 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Patl_2880 7839afb74ca561fe0464bd780beea246 299 SUPERFAMILY SSF54913 226 298 3.89E-21 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Patl_2880 7839afb74ca561fe0464bd780beea246 299 Gene3D G3DSA:3.40.190.10 103 192 7.0E-67 T 11-10-2018 Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 ProSitePatterns PS00438 Catalase proximal active site signature. 65 81 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 Gene3D G3DSA:1.20.1370.20 442 544 5.8E-31 T 11-10-2018 Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 359 367 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 Gene3D G3DSA:2.40.180.10 5 439 6.9E-200 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 Pfam PF00199 Catalase 29 413 1.1E-178 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 Gene3D G3DSA:3.40.50.880 545 688 5.2E-30 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 PRINTS PR00067 Catalase signature 145 163 5.7E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 PRINTS PR00067 Catalase signature 346 372 5.7E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 PRINTS PR00067 Catalase signature 105 123 5.7E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 PRINTS PR00067 Catalase signature 314 341 5.7E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 PRINTS PR00067 Catalase signature 42 65 5.7E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 PRINTS PR00067 Catalase signature 126 143 5.7E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 PIRSF PIRSF038927 2 688 0.0 T 11-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 SUPERFAMILY SSF56634 21 518 4.06E-215 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 SUPERFAMILY SSF52317 544 659 1.27E-16 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 Pfam PF06628 Catalase-related immune-responsive 444 508 1.2E-20 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0766 09cbc9ab4692cc32eb8120eec4d284d3 688 SMART SM01060 29 417 1.0E-268 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0218 ba80f8396e801165efb9d014a52bdac6 239 Gene3D G3DSA:3.40.50.2300 1 122 7.3E-34 T 11-10-2018 Patl_0218 ba80f8396e801165efb9d014a52bdac6 239 Gene3D G3DSA:1.10.10.10 123 237 3.3E-40 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0218 ba80f8396e801165efb9d014a52bdac6 239 SMART SM00448 3 114 2.5E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0218 ba80f8396e801165efb9d014a52bdac6 239 Pfam PF00072 Response regulator receiver domain 5 114 2.0E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0218 ba80f8396e801165efb9d014a52bdac6 239 SUPERFAMILY SSF46894 132 233 3.91E-32 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_0218 ba80f8396e801165efb9d014a52bdac6 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.8E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_0218 ba80f8396e801165efb9d014a52bdac6 239 SUPERFAMILY SSF52172 4 131 2.28E-38 T 11-10-2018 IPR011006 CheY-like superfamily Patl_0218 ba80f8396e801165efb9d014a52bdac6 239 SMART SM00862 156 232 3.3E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_0959 d05b53980b24dd38837d9f1cffc85aff 290 Gene3D G3DSA:2.50.20.10 44 281 1.5E-50 T 11-10-2018 Patl_0959 d05b53980b24dd38837d9f1cffc85aff 290 Pfam PF17131 Outer membrane lipoprotein-sorting protein 92 280 5.2E-45 T 11-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein Patl_3311 f8b2d565fc6d44c838972ffe9ada3bd7 182 Gene3D G3DSA:1.10.10.10 118 178 3.2E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3311 f8b2d565fc6d44c838972ffe9ada3bd7 182 Pfam PF08281 Sigma-70, region 4 120 171 1.9E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_3311 f8b2d565fc6d44c838972ffe9ada3bd7 182 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 173 6.1E-30 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Patl_3311 f8b2d565fc6d44c838972ffe9ada3bd7 182 Gene3D G3DSA:1.10.1740.10 2 117 2.2E-28 T 11-10-2018 Patl_3311 f8b2d565fc6d44c838972ffe9ada3bd7 182 SUPERFAMILY SSF88946 5 102 4.91E-26 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Patl_3311 f8b2d565fc6d44c838972ffe9ada3bd7 182 SUPERFAMILY SSF88659 109 175 2.43E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_3311 f8b2d565fc6d44c838972ffe9ada3bd7 182 Pfam PF04542 Sigma-70 region 2 24 90 3.7E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Patl_2843 bab4a8765c6438c7330f2a7926d1fbee 256 SUPERFAMILY SSF48452 102 223 1.14E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2843 bab4a8765c6438c7330f2a7926d1fbee 256 Gene3D G3DSA:1.25.40.10 89 251 4.9E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1194 95ce9fde6e77aa2bb79df2b90ed254bd 634 PIRSF PIRSF001589 1 634 1.5E-176 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Patl_1194 95ce9fde6e77aa2bb79df2b90ed254bd 634 Pfam PF13537 Glutamine amidotransferase domain 47 166 1.7E-48 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Patl_1194 95ce9fde6e77aa2bb79df2b90ed254bd 634 Pfam PF00733 Asparagine synthase 250 620 1.5E-97 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Patl_1194 95ce9fde6e77aa2bb79df2b90ed254bd 634 SUPERFAMILY SSF52402 232 617 1.39E-79 T 11-10-2018 Patl_1194 95ce9fde6e77aa2bb79df2b90ed254bd 634 Gene3D G3DSA:3.60.20.10 3 186 2.8E-66 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_1194 95ce9fde6e77aa2bb79df2b90ed254bd 634 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 557 7.4E-158 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Patl_1194 95ce9fde6e77aa2bb79df2b90ed254bd 634 SUPERFAMILY SSF56235 1 223 3.35E-70 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_3892 b1e6dd03af93c0d6122471af0a993fbf 293 Gene3D G3DSA:2.60.120.10 34 99 5.9E-6 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_3892 b1e6dd03af93c0d6122471af0a993fbf 293 SUPERFAMILY SSF51182 36 131 1.33E-9 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_3892 b1e6dd03af93c0d6122471af0a993fbf 293 Gene3D G3DSA:1.10.10.60 184 291 5.1E-26 T 11-10-2018 Patl_3892 b1e6dd03af93c0d6122471af0a993fbf 293 Pfam PF12833 Helix-turn-helix domain 210 288 3.9E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_3892 b1e6dd03af93c0d6122471af0a993fbf 293 Pfam PF02311 AraC-like ligand binding domain 35 113 1.4E-7 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 Patl_3892 b1e6dd03af93c0d6122471af0a993fbf 293 SUPERFAMILY SSF46689 242 289 4.48E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_3892 b1e6dd03af93c0d6122471af0a993fbf 293 SMART SM00342 204 287 2.0E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 PIRSF PIRSF000350 1 467 2.4E-85 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 2.4E-71 T 11-10-2018 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 2.4E-71 T 11-10-2018 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 2.4E-71 T 11-10-2018 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 2.4E-71 T 11-10-2018 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 2.4E-71 T 11-10-2018 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 2.4E-71 T 11-10-2018 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.4E-71 T 11-10-2018 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 2.4E-71 T 11-10-2018 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 2.4E-71 T 11-10-2018 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 SUPERFAMILY SSF51905 7 380 2.59E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 454 1.9E-36 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 Gene3D G3DSA:3.50.50.60 8 331 1.6E-120 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.0E-40 T 11-10-2018 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 6.0E-40 T 11-10-2018 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 6.0E-40 T 11-10-2018 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 6.0E-40 T 11-10-2018 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 6.0E-40 T 11-10-2018 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 459 2.4E-151 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 Gene3D G3DSA:3.30.390.30 345 466 1.0E-45 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 Gene3D G3DSA:3.50.50.60 149 270 1.6E-120 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 327 2.7E-64 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Patl_3352 84e3ff61c4cde54deb9c4e08868fe600 474 SUPERFAMILY SSF55424 342 465 2.23E-40 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Patl_2113 67e03ec541f88e4a8dc7dabf6d07ef81 590 Gene3D G3DSA:2.60.40.1180 498 585 2.4E-5 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_2113 67e03ec541f88e4a8dc7dabf6d07ef81 590 SUPERFAMILY SSF51445 97 494 7.43E-98 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_2113 67e03ec541f88e4a8dc7dabf6d07ef81 590 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 502 588 3.7E-7 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Patl_2113 67e03ec541f88e4a8dc7dabf6d07ef81 590 SUPERFAMILY SSF81296 8 100 2.8E-18 T 11-10-2018 IPR014756 Immunoglobulin E-set Patl_2113 67e03ec541f88e4a8dc7dabf6d07ef81 590 Pfam PF00128 Alpha amylase, catalytic domain 143 244 3.5E-16 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_2113 67e03ec541f88e4a8dc7dabf6d07ef81 590 Pfam PF00128 Alpha amylase, catalytic domain 260 453 4.7E-10 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_2113 67e03ec541f88e4a8dc7dabf6d07ef81 590 SMART SM00642 122 487 2.8E-13 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_2113 67e03ec541f88e4a8dc7dabf6d07ef81 590 SUPERFAMILY SSF51011 500 557 1.12E-5 T 11-10-2018 Patl_2113 67e03ec541f88e4a8dc7dabf6d07ef81 590 PIRSF PIRSF000463 6 581 1.6E-89 T 11-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Patl_2113 67e03ec541f88e4a8dc7dabf6d07ef81 590 Gene3D G3DSA:3.20.20.80 110 488 7.2E-111 T 11-10-2018 Patl_2113 67e03ec541f88e4a8dc7dabf6d07ef81 590 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 84 4.9E-13 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Patl_2113 67e03ec541f88e4a8dc7dabf6d07ef81 590 Gene3D G3DSA:2.60.40.10 5 101 6.1E-18 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0298 17706eebe4646a12f7f02f2f6c79c4d6 136 Pfam PF03203 MerC mercury resistance protein 9 121 6.4E-28 T 11-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 Patl_1013 eebde38a9a7bf2e9465820251a4ecce4 206 Pfam PF01479 S4 domain 96 143 6.6E-20 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1013 eebde38a9a7bf2e9465820251a4ecce4 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 2.6E-33 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Patl_1013 eebde38a9a7bf2e9465820251a4ecce4 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.949 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Patl_1013 eebde38a9a7bf2e9465820251a4ecce4 206 SUPERFAMILY SSF55174 3 206 1.44E-73 T 11-10-2018 Patl_1013 eebde38a9a7bf2e9465820251a4ecce4 206 SMART SM00363 96 160 9.1E-19 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1013 eebde38a9a7bf2e9465820251a4ecce4 206 Gene3D G3DSA:1.10.1050.10 6 206 6.3E-81 T 11-10-2018 Patl_1013 eebde38a9a7bf2e9465820251a4ecce4 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 2.9E-86 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Patl_1013 eebde38a9a7bf2e9465820251a4ecce4 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1013 eebde38a9a7bf2e9465820251a4ecce4 206 SMART SM01390 3 95 2.7E-51 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Patl_1013 eebde38a9a7bf2e9465820251a4ecce4 206 Gene3D G3DSA:3.10.290.10 95 191 6.3E-81 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Patl_4081 eb0984b8adf8b5b197439afb416bdcf9 306 Pfam PF00892 EamA-like transporter family 8 144 1.5E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Patl_4081 eb0984b8adf8b5b197439afb416bdcf9 306 SUPERFAMILY SSF103481 45 145 3.92E-11 T 11-10-2018 Patl_4081 eb0984b8adf8b5b197439afb416bdcf9 306 SUPERFAMILY SSF103481 184 287 2.22E-7 T 11-10-2018 Patl_4081 eb0984b8adf8b5b197439afb416bdcf9 306 TIGRFAM TIGR00688 rarD: protein RarD 8 259 1.4E-72 T 11-10-2018 IPR004626 RarD protein GO:0005887 Patl_1578 e0b7ac631e07b3923c4feb55ec669153 176 Gene3D G3DSA:2.40.30.60 1 94 6.6E-31 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Patl_1578 e0b7ac631e07b3923c4feb55ec669153 176 Pfam PF05239 PRC-barrel domain 98 171 3.2E-11 T 11-10-2018 IPR027275 PRC-barrel domain Patl_1578 e0b7ac631e07b3923c4feb55ec669153 176 Pfam PF01782 RimM N-terminal domain 10 90 2.7E-24 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 Patl_1578 e0b7ac631e07b3923c4feb55ec669153 176 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 175 1.7E-52 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Patl_1578 e0b7ac631e07b3923c4feb55ec669153 176 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 176 23.951 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Patl_1578 e0b7ac631e07b3923c4feb55ec669153 176 SUPERFAMILY SSF50447 6 94 9.53E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Patl_1578 e0b7ac631e07b3923c4feb55ec669153 176 Gene3D G3DSA:2.30.30.240 95 176 1.2E-29 T 11-10-2018 Patl_1578 e0b7ac631e07b3923c4feb55ec669153 176 SUPERFAMILY SSF50346 100 175 5.1E-20 T 11-10-2018 IPR011033 PRC-barrel-like superfamily Patl_1052 72a23d6e02dd76efb39a181c2951b501 579 Gene3D G3DSA:3.30.565.10 427 579 2.7E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1052 72a23d6e02dd76efb39a181c2951b501 579 SUPERFAMILY SSF55874 429 577 1.44E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1052 72a23d6e02dd76efb39a181c2951b501 579 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 472 578 2.0E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1052 72a23d6e02dd76efb39a181c2951b501 579 Gene3D G3DSA:1.10.287.130 317 420 6.8E-18 T 11-10-2018 Patl_1052 72a23d6e02dd76efb39a181c2951b501 579 SMART SM00387 467 579 3.9E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1052 72a23d6e02dd76efb39a181c2951b501 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 535 2.9E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1052 72a23d6e02dd76efb39a181c2951b501 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 2.9E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1052 72a23d6e02dd76efb39a181c2951b501 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 556 2.9E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1052 72a23d6e02dd76efb39a181c2951b501 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 521 2.9E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1052 72a23d6e02dd76efb39a181c2951b501 579 SUPERFAMILY SSF47384 336 376 4.32E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_2423 ab87c0f9c998db3e2d6c87dc0688cffb 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 5.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_2423 ab87c0f9c998db3e2d6c87dc0688cffb 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 5.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_2423 ab87c0f9c998db3e2d6c87dc0688cffb 214 Gene3D G3DSA:1.10.357.10 67 206 5.5E-46 T 11-10-2018 Patl_2423 ab87c0f9c998db3e2d6c87dc0688cffb 214 SUPERFAMILY SSF46689 13 87 1.33E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_2423 ab87c0f9c998db3e2d6c87dc0688cffb 214 Pfam PF08362 YcdC-like protein, C-terminal region 67 207 1.6E-49 T 11-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 Patl_2423 ab87c0f9c998db3e2d6c87dc0688cffb 214 Gene3D G3DSA:1.10.10.60 4 66 7.2E-18 T 11-10-2018 Patl_2423 ab87c0f9c998db3e2d6c87dc0688cffb 214 SUPERFAMILY SSF48498 85 207 2.18E-35 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Patl_2423 ab87c0f9c998db3e2d6c87dc0688cffb 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 1.1E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_1834 504a5720c67d797ca604e16660d74a03 473 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 33 465 61.361 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Patl_1834 504a5720c67d797ca604e16660d74a03 473 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 35 463 7.2E-107 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Patl_1834 504a5720c67d797ca604e16660d74a03 473 Pfam PF00919 Uncharacterized protein family UPF0004 34 125 5.0E-22 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Patl_1834 504a5720c67d797ca604e16660d74a03 473 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 169 189 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Patl_1834 504a5720c67d797ca604e16660d74a03 473 SUPERFAMILY SSF102114 146 395 8.37E-51 T 11-10-2018 Patl_1834 504a5720c67d797ca604e16660d74a03 473 Gene3D G3DSA:3.40.50.12160 33 154 2.0E-30 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Patl_1834 504a5720c67d797ca604e16660d74a03 473 Pfam PF04055 Radical SAM superfamily 171 348 2.6E-29 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Patl_1834 504a5720c67d797ca604e16660d74a03 473 SMART SM00729 165 390 2.0E-50 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Patl_1834 504a5720c67d797ca604e16660d74a03 473 Gene3D G3DSA:3.80.30.20 163 404 4.6E-73 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Patl_1834 504a5720c67d797ca604e16660d74a03 473 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 34 462 3.3E-184 T 11-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Patl_1834 504a5720c67d797ca604e16660d74a03 473 Gene3D G3DSA:2.40.50.140 405 470 3.8E-20 T 11-10-2018 Patl_1202 0856c01903b748e501cd30b4086f5e81 542 SUPERFAMILY SSF56176 18 233 1.26E-29 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Patl_1202 0856c01903b748e501cd30b4086f5e81 542 SUPERFAMILY SSF55103 219 540 6.38E-14 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Patl_1202 0856c01903b748e501cd30b4086f5e81 542 Pfam PF01565 FAD binding domain 42 160 1.3E-13 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Patl_1202 0856c01903b748e501cd30b4086f5e81 542 Gene3D G3DSA:3.40.462.10 235 502 2.2E-22 T 11-10-2018 IPR016170 Cytokinin dehydrogenase, C-terminal domain superfamily KEGG: 00908+1.5.99.12 Patl_1202 0856c01903b748e501cd30b4086f5e81 542 Gene3D G3DSA:3.30.43.10 3 97 2.1E-9 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Patl_1202 0856c01903b748e501cd30b4086f5e81 542 Gene3D G3DSA:3.30.465.10 99 233 1.6E-41 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Patl_2624 ad0581b5ec1d90bc7cf2aca4e2b3675d 384 SUPERFAMILY SSF50022 21 172 1.23E-37 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Patl_2624 ad0581b5ec1d90bc7cf2aca4e2b3675d 384 Gene3D G3DSA:3.90.380.10 251 361 4.2E-6 T 11-10-2018 Patl_2624 ad0581b5ec1d90bc7cf2aca4e2b3675d 384 Gene3D G3DSA:3.90.380.10 181 248 5.4E-6 T 11-10-2018 Patl_2624 ad0581b5ec1d90bc7cf2aca4e2b3675d 384 Pfam PF00355 Rieske [2Fe-2S] domain 64 143 1.9E-14 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Patl_2624 ad0581b5ec1d90bc7cf2aca4e2b3675d 384 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 196 373 1.2E-17 T 11-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 Patl_2624 ad0581b5ec1d90bc7cf2aca4e2b3675d 384 SUPERFAMILY SSF55961 177 374 1.02E-29 T 11-10-2018 Patl_2624 ad0581b5ec1d90bc7cf2aca4e2b3675d 384 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 116 136 2.8E-7 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Patl_2624 ad0581b5ec1d90bc7cf2aca4e2b3675d 384 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 75 90 2.8E-7 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Patl_2624 ad0581b5ec1d90bc7cf2aca4e2b3675d 384 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 189 211 2.8E-7 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 Patl_2624 ad0581b5ec1d90bc7cf2aca4e2b3675d 384 Gene3D G3DSA:2.102.10.10 62 180 1.3E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Patl_2240 710a80ca19a92e08eff2bb71514e64d7 435 Pfam PF12704 MacB-like periplasmic core domain 20 263 5.5E-26 T 11-10-2018 IPR025857 MacB-like periplasmic core domain Patl_2240 710a80ca19a92e08eff2bb71514e64d7 435 Pfam PF02687 FtsX-like permease family 339 426 9.8E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 Pfam PF00258 Flavodoxin 73 202 6.9E-31 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 Gene3D G3DSA:2.40.30.10 243 450 3.1E-73 T 11-10-2018 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 Gene3D G3DSA:3.40.50.80 456 610 5.8E-60 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 PRINTS PR00369 Flavodoxin signature 120 131 7.9E-16 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 PRINTS PR00369 Flavodoxin signature 72 85 7.9E-16 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 PRINTS PR00369 Flavodoxin signature 176 195 7.9E-16 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 PRINTS PR00369 Flavodoxin signature 152 162 7.9E-16 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 SUPERFAMILY SSF52343 455 610 3.54E-52 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 397 404 2.8E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 467 486 2.8E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 559 567 2.8E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 281 291 2.8E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 492 501 2.8E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 536 552 2.8E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 430 439 2.8E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 505 516 2.8E-27 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 SUPERFAMILY SSF52218 71 216 2.19E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 Gene3D G3DSA:1.20.990.10 291 395 3.1E-73 T 11-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 14 610 3.3E-268 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 PIRSF PIRSF000207 3 610 1.8E-264 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 SUPERFAMILY SSF63380 240 457 8.51E-66 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 Pfam PF00667 FAD binding domain 369 435 4.8E-12 T 11-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 Pfam PF00667 FAD binding domain 242 354 2.3E-17 T 11-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 Gene3D G3DSA:3.40.50.360 63 226 1.7E-49 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_4039 181ddcb636fe2cc34cc776ecdeff9f72 610 Pfam PF00175 Oxidoreductase NAD-binding domain 468 574 9.3E-20 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Patl_0398 3940a2fff150e0d6747d9515dca9ac9d 327 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 158 325 1.3E-43 T 11-10-2018 IPR000160 GGDEF domain Patl_0398 3940a2fff150e0d6747d9515dca9ac9d 327 Pfam PF13426 PAS domain 42 148 3.3E-7 T 11-10-2018 IPR000014 PAS domain Patl_0398 3940a2fff150e0d6747d9515dca9ac9d 327 Gene3D G3DSA:3.30.450.20 27 150 3.0E-25 T 11-10-2018 Patl_0398 3940a2fff150e0d6747d9515dca9ac9d 327 SUPERFAMILY SSF55785 42 159 1.31E-14 T 11-10-2018 IPR035965 PAS domain superfamily Patl_0398 3940a2fff150e0d6747d9515dca9ac9d 327 SUPERFAMILY SSF55073 166 324 3.92E-39 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_0398 3940a2fff150e0d6747d9515dca9ac9d 327 SMART SM00091 31 97 7.7E-10 T 11-10-2018 IPR000014 PAS domain Patl_0398 3940a2fff150e0d6747d9515dca9ac9d 327 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 28 153 3.2E-10 T 11-10-2018 IPR000014 PAS domain Patl_0398 3940a2fff150e0d6747d9515dca9ac9d 327 SMART SM00267 150 326 1.4E-50 T 11-10-2018 IPR000160 GGDEF domain Patl_0398 3940a2fff150e0d6747d9515dca9ac9d 327 Pfam PF00990 Diguanylate cyclase, GGDEF domain 161 322 3.8E-42 T 11-10-2018 IPR000160 GGDEF domain Patl_0398 3940a2fff150e0d6747d9515dca9ac9d 327 Gene3D G3DSA:3.30.70.270 151 324 4.6E-48 T 11-10-2018 Patl_0238 655a3802e0d79481cef67d2712adad76 334 Gene3D G3DSA:3.30.1300.30 48 316 5.0E-73 T 11-10-2018 Patl_0238 655a3802e0d79481cef67d2712adad76 334 Gene3D G3DSA:1.10.40.60 105 227 5.0E-73 T 11-10-2018 IPR038072 GspK, central domain superfamily Patl_0238 655a3802e0d79481cef67d2712adad76 334 SUPERFAMILY SSF158544 107 224 2.88E-25 T 11-10-2018 IPR038072 GspK, central domain superfamily Patl_0238 655a3802e0d79481cef67d2712adad76 334 SUPERFAMILY SSF54523 42 332 1.52E-28 T 11-10-2018 Patl_0238 655a3802e0d79481cef67d2712adad76 334 Pfam PF03934 Type II secretion system (T2SS), protein K 36 324 2.9E-77 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 Patl_0238 655a3802e0d79481cef67d2712adad76 334 SUPERFAMILY SSF158544 227 293 1.57E-13 T 11-10-2018 IPR038072 GspK, central domain superfamily Patl_0238 655a3802e0d79481cef67d2712adad76 334 PIRSF PIRSF002786 7 334 2.2E-63 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 Patl_0238 655a3802e0d79481cef67d2712adad76 334 Gene3D G3DSA:1.10.40.60 228 293 5.0E-73 T 11-10-2018 IPR038072 GspK, central domain superfamily Patl_0141 a40d0edc08c3d82baf68210dff115185 410 SUPERFAMILY SSF103473 16 381 2.49E-36 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_0141 a40d0edc08c3d82baf68210dff115185 410 Pfam PF07690 Major Facilitator Superfamily 19 348 5.6E-13 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_0141 a40d0edc08c3d82baf68210dff115185 410 Gene3D G3DSA:1.20.1250.20 2 199 2.2E-5 T 11-10-2018 Patl_0141 a40d0edc08c3d82baf68210dff115185 410 Gene3D G3DSA:1.20.1250.20 202 386 5.7E-19 T 11-10-2018 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 230 789 9.8E-146 T 11-10-2018 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 ProSitePatterns PS01047 Heavy-metal-associated domain. 99 128 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 PRINTS PR00943 Copper-transporting ATPase signature 664 681 3.1E-5 T 11-10-2018 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 PRINTS PR00943 Copper-transporting ATPase signature 213 231 3.1E-5 T 11-10-2018 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 PRINTS PR00943 Copper-transporting ATPase signature 138 158 3.1E-5 T 11-10-2018 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 PRINTS PR00943 Copper-transporting ATPase signature 233 252 3.1E-5 T 11-10-2018 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 Pfam PF00702 haloacid dehalogenase-like hydrolase 504 701 2.6E-25 T 11-10-2018 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 509 515 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 282 770 4.7E-77 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 Gene3D G3DSA:3.40.1110.10 517 621 5.0E-67 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 359 373 2.7E-19 T 11-10-2018 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 687 706 2.7E-19 T 11-10-2018 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 710 722 2.7E-19 T 11-10-2018 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 521 2.7E-19 T 11-10-2018 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 Gene3D G3DSA:3.30.70.100 93 160 5.4E-14 T 11-10-2018 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 6 89 1.7E-26 T 11-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 Gene3D G3DSA:3.40.50.1000 487 725 5.0E-67 T 11-10-2018 IPR023214 HAD superfamily Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 SUPERFAMILY SSF56784 506 786 1.14E-39 T 11-10-2018 IPR036412 HAD-like superfamily Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 248 789 7.9E-154 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 Pfam PF00403 Heavy-metal-associated domain 98 157 2.9E-10 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 Gene3D G3DSA:2.70.150.20 311 413 9.0E-27 T 11-10-2018 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 SUPERFAMILY SSF81665 272 500 9.29E-12 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 SUPERFAMILY SSF81653 312 407 2.09E-21 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 SUPERFAMILY SSF55008 86 165 3.8E-18 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 275 791 2.1E-119 T 11-10-2018 Patl_2068 0db7d5cf63934e6a912b61d0e38b3d86 791 Pfam PF00122 E1-E2 ATPase 312 487 2.6E-45 T 11-10-2018 Patl_3154 af287c6589cf85bd56fcef4ccd82ea9e 200 Gene3D G3DSA:1.10.10.880 4 68 3.8E-24 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 Patl_3154 af287c6589cf85bd56fcef4ccd82ea9e 200 SUPERFAMILY SSF89069 6 68 1.57E-18 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 Patl_3154 af287c6589cf85bd56fcef4ccd82ea9e 200 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 6 77 1.9E-25 T 11-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 Patl_3154 af287c6589cf85bd56fcef4ccd82ea9e 200 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 133 171 3.3E-6 T 11-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal Patl_3154 af287c6589cf85bd56fcef4ccd82ea9e 200 PIRSF PIRSF016938 1 185 2.4E-25 T 11-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 Patl_0700 44c8936dd1b798fdf67fb021744c4c20 152 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 129 4.6E-25 T 11-10-2018 IPR009678 Bacteriophage tail completion protein R Patl_3121 85b498c4109b3d2f2263dc3f76ff12e7 444 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 13 360 5.1E-129 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Patl_3121 85b498c4109b3d2f2263dc3f76ff12e7 444 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 9 444 28.192 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Patl_3121 85b498c4109b3d2f2263dc3f76ff12e7 444 Pfam PF02601 Exonuclease VII, large subunit 128 441 7.3E-94 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Patl_3121 85b498c4109b3d2f2263dc3f76ff12e7 444 Pfam PF13742 OB-fold nucleic acid binding domain 12 104 7.3E-28 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 Patl_0066 e9c413251945093d77479bc8c1d8c810 192 Gene3D G3DSA:3.40.1410.10 9 185 2.0E-46 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Patl_0066 e9c413251945093d77479bc8c1d8c810 192 SUPERFAMILY SSF64288 22 185 4.15E-40 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Patl_0066 e9c413251945093d77479bc8c1d8c810 192 Pfam PF04345 Chorismate lyase 13 181 4.0E-35 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 Patl_0066 e9c413251945093d77479bc8c1d8c810 192 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 14 185 26.906 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 Patl_0154 8fc6c225615151f93ead2f6376ec5606 566 SUPERFAMILY SSF56801 15 555 2.49E-155 T 11-10-2018 Patl_0154 8fc6c225615151f93ead2f6376ec5606 566 Pfam PF13193 AMP-binding enzyme C-terminal domain 466 541 6.7E-16 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Patl_0154 8fc6c225615151f93ead2f6376ec5606 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 207 218 - T 11-10-2018 IPR020845 AMP-binding, conserved site Patl_0154 8fc6c225615151f93ead2f6376ec5606 566 Gene3D G3DSA:3.40.50.12780 16 453 3.6E-119 T 11-10-2018 Patl_0154 8fc6c225615151f93ead2f6376ec5606 566 Gene3D G3DSA:3.30.300.310 454 555 2.1E-30 T 11-10-2018 Patl_0154 8fc6c225615151f93ead2f6376ec5606 566 Pfam PF00501 AMP-binding enzyme 29 457 1.3E-106 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Patl_2254 f53c86f46b38469af92f42455e44926e 144 Gene3D G3DSA:1.10.10.10 2 140 3.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2254 f53c86f46b38469af92f42455e44926e 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 63 97 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Patl_2254 f53c86f46b38469af92f42455e44926e 144 SMART SM00347 24 124 3.0E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_2254 f53c86f46b38469af92f42455e44926e 144 SUPERFAMILY SSF46785 5 139 7.97E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2254 f53c86f46b38469af92f42455e44926e 144 Pfam PF12802 MarR family 30 88 6.3E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_2254 f53c86f46b38469af92f42455e44926e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 1.9E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_2254 f53c86f46b38469af92f42455e44926e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 1.9E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_2254 f53c86f46b38469af92f42455e44926e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 1.9E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_3211 e4f675209d8ff2ebb815408e13209c60 132 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 67 8.3E-19 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Patl_3211 e4f675209d8ff2ebb815408e13209c60 132 SUPERFAMILY SSF52374 1 127 4.35E-30 T 11-10-2018 Patl_3211 e4f675209d8ff2ebb815408e13209c60 132 Pfam PF01467 Cytidylyltransferase-like 6 109 7.3E-19 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Patl_3211 e4f675209d8ff2ebb815408e13209c60 132 Gene3D G3DSA:3.40.50.620 1 129 1.5E-38 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_1335 bb193659afe0a2fc6cd6fb1ecfc187ec 327 Gene3D G3DSA:3.30.2350.10 87 319 9.5E-73 T 11-10-2018 Patl_1335 bb193659afe0a2fc6cd6fb1ecfc187ec 327 SUPERFAMILY SSF55120 82 319 5.76E-78 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1335 bb193659afe0a2fc6cd6fb1ecfc187ec 327 Pfam PF01479 S4 domain 22 67 9.0E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1335 bb193659afe0a2fc6cd6fb1ecfc187ec 327 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 138 152 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1335 bb193659afe0a2fc6cd6fb1ecfc187ec 327 Pfam PF00849 RNA pseudouridylate synthase 95 245 4.0E-28 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1335 bb193659afe0a2fc6cd6fb1ecfc187ec 327 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 315 2.4E-100 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1335 bb193659afe0a2fc6cd6fb1ecfc187ec 327 Gene3D G3DSA:3.10.290.10 5 79 9.5E-21 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Patl_1335 bb193659afe0a2fc6cd6fb1ecfc187ec 327 SMART SM00363 21 80 4.0E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1335 bb193659afe0a2fc6cd6fb1ecfc187ec 327 SUPERFAMILY SSF55174 21 71 6.73E-10 T 11-10-2018 Patl_0095 0fb3d6b91a90e7e3b98f04f6e492010d 372 SUPERFAMILY SSF53590 26 361 2.88E-61 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like Patl_0095 0fb3d6b91a90e7e3b98f04f6e492010d 372 Gene3D G3DSA:3.90.245.10 26 320 5.1E-71 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like Patl_0095 0fb3d6b91a90e7e3b98f04f6e492010d 372 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 28 353 1.8E-53 T 11-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain Patl_4249 76bbc790b3ce7f95085e6ffebf0726b3 516 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 7 508 1.3E-224 T 11-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Patl_4249 76bbc790b3ce7f95085e6ffebf0726b3 516 SUPERFAMILY SSF53686 11 358 1.02E-97 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Patl_4249 76bbc790b3ce7f95085e6ffebf0726b3 516 Gene3D G3DSA:3.40.50.1100 53 152 7.0E-124 T 11-10-2018 Patl_4249 76bbc790b3ce7f95085e6ffebf0726b3 516 Gene3D G3DSA:3.40.50.1100 17 322 7.0E-124 T 11-10-2018 Patl_4249 76bbc790b3ce7f95085e6ffebf0726b3 516 SUPERFAMILY SSF55021 415 508 2.22E-26 T 11-10-2018 Patl_4249 76bbc790b3ce7f95085e6ffebf0726b3 516 Gene3D G3DSA:3.40.1020.10 333 510 1.5E-71 T 11-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Patl_4249 76bbc790b3ce7f95085e6ffebf0726b3 516 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 427 508 1.9E-26 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Patl_4249 76bbc790b3ce7f95085e6ffebf0726b3 516 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 414 1.1E-27 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 Patl_4249 76bbc790b3ce7f95085e6ffebf0726b3 516 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 305 1.5E-75 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Patl_4249 76bbc790b3ce7f95085e6ffebf0726b3 516 SUPERFAMILY SSF55021 331 418 1.85E-27 T 11-10-2018 Patl_1594 d49a483e7e19432cf937ebbee0d996e1 548 SMART SM00448 1 115 7.0E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1594 d49a483e7e19432cf937ebbee0d996e1 548 Pfam PF13581 Histidine kinase-like ATPase domain 471 545 6.9E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1594 d49a483e7e19432cf937ebbee0d996e1 548 Gene3D G3DSA:3.60.40.10 167 393 6.4E-30 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Patl_1594 d49a483e7e19432cf937ebbee0d996e1 548 Gene3D G3DSA:3.40.50.12740 1 166 8.7E-40 T 11-10-2018 Patl_1594 d49a483e7e19432cf937ebbee0d996e1 548 SUPERFAMILY SSF52172 1 141 2.85E-38 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1594 d49a483e7e19432cf937ebbee0d996e1 548 Gene3D G3DSA:3.30.565.10 408 548 3.6E-10 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1594 d49a483e7e19432cf937ebbee0d996e1 548 SUPERFAMILY SSF55874 412 531 4.52E-7 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1594 d49a483e7e19432cf937ebbee0d996e1 548 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 189 373 6.7E-27 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Patl_1594 d49a483e7e19432cf937ebbee0d996e1 548 Pfam PF00072 Response regulator receiver domain 3 115 9.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1594 d49a483e7e19432cf937ebbee0d996e1 548 SMART SM00331 164 377 8.9E-5 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Patl_3563 c963ac0545e81ec0d2929a8d33123f1a 156 Gene3D G3DSA:3.40.50.10110 1 145 6.4E-51 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily Patl_3563 c963ac0545e81ec0d2929a8d33123f1a 156 SUPERFAMILY SSF102400 1 144 2.22E-44 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily Patl_3563 c963ac0545e81ec0d2929a8d33123f1a 156 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 141 2.7E-42 T 11-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 Patl_2183 042849615fe36c1b85415a05f5d354ef 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.4E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2183 042849615fe36c1b85415a05f5d354ef 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.4E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2183 042849615fe36c1b85415a05f5d354ef 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.4E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2183 042849615fe36c1b85415a05f5d354ef 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.4E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2183 042849615fe36c1b85415a05f5d354ef 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.4E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2183 042849615fe36c1b85415a05f5d354ef 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.4E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2183 042849615fe36c1b85415a05f5d354ef 247 SUPERFAMILY SSF51735 11 244 1.04E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2183 042849615fe36c1b85415a05f5d354ef 247 Gene3D G3DSA:3.40.50.720 2 246 1.6E-69 T 11-10-2018 Patl_2183 042849615fe36c1b85415a05f5d354ef 247 Pfam PF00106 short chain dehydrogenase 14 209 8.6E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2183 042849615fe36c1b85415a05f5d354ef 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_0521 81c0a5cf19b2532043f760032f9e0754 646 Gene3D G3DSA:3.40.50.12780 48 513 1.8E-102 T 11-10-2018 Patl_0521 81c0a5cf19b2532043f760032f9e0754 646 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 643 51.056 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Patl_0521 81c0a5cf19b2532043f760032f9e0754 646 ProSitePatterns PS00455 Putative AMP-binding domain signature. 259 270 - T 11-10-2018 IPR020845 AMP-binding, conserved site Patl_0521 81c0a5cf19b2532043f760032f9e0754 646 SUPERFAMILY SSF56801 8 641 1.7E-182 T 11-10-2018 Patl_0521 81c0a5cf19b2532043f760032f9e0754 646 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 21 641 2.5E-295 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Patl_0521 81c0a5cf19b2532043f760032f9e0754 646 Pfam PF00501 AMP-binding enzyme 83 520 2.6E-88 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Patl_0521 81c0a5cf19b2532043f760032f9e0754 646 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 23 80 2.7E-21 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Patl_0521 81c0a5cf19b2532043f760032f9e0754 646 Gene3D G3DSA:3.30.300.30 516 645 9.1E-29 T 11-10-2018 Patl_0521 81c0a5cf19b2532043f760032f9e0754 646 Pfam PF13193 AMP-binding enzyme C-terminal domain 529 607 8.4E-21 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Patl_3812 71a0c017888a36c7a3811de6b079dd24 260 Gene3D G3DSA:1.10.12.10 203 260 2.5E-17 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Patl_3812 71a0c017888a36c7a3811de6b079dd24 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 3.0E-65 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Patl_3812 71a0c017888a36c7a3811de6b079dd24 260 SUPERFAMILY SSF52096 7 260 1.34E-78 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_3812 71a0c017888a36c7a3811de6b079dd24 260 Gene3D G3DSA:3.90.226.10 2 202 8.0E-61 T 11-10-2018 Patl_1177 3a677c2bad3be6e3307860fe9fca5ddb 193 SUPERFAMILY SSF51161 39 192 2.22E-29 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Patl_1177 3a677c2bad3be6e3307860fe9fca5ddb 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 141 171 4.3E-5 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_1177 3a677c2bad3be6e3307860fe9fca5ddb 193 Gene3D G3DSA:2.160.10.10 26 193 7.0E-34 T 11-10-2018 Patl_4141 06bc9316890c6a6e29762e35957cb502 320 Pfam PF03631 Virulence factor BrkB 33 287 6.4E-59 T 11-10-2018 IPR017039 Virulence factor BrkB Patl_4141 06bc9316890c6a6e29762e35957cb502 320 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 27 285 2.2E-30 T 11-10-2018 IPR017039 Virulence factor BrkB Patl_4141 06bc9316890c6a6e29762e35957cb502 320 PIRSF PIRSF035875 6 307 1.8E-71 T 11-10-2018 IPR017039 Virulence factor BrkB Patl_0761 bd5a0460091afcca43e2d9499589aaee 881 Gene3D G3DSA:3.40.50.300 2 153 3.7E-8 T 11-10-2018 Patl_0761 bd5a0460091afcca43e2d9499589aaee 881 SUPERFAMILY SSF46894 800 875 7.48E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_0761 bd5a0460091afcca43e2d9499589aaee 881 Pfam PF00196 Bacterial regulatory proteins, luxR family 816 868 2.8E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0761 bd5a0460091afcca43e2d9499589aaee 881 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 816 830 8.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0761 bd5a0460091afcca43e2d9499589aaee 881 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 830 846 8.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0761 bd5a0460091afcca43e2d9499589aaee 881 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 846 858 8.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0761 bd5a0460091afcca43e2d9499589aaee 881 Gene3D G3DSA:1.10.10.10 759 876 1.6E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0761 bd5a0460091afcca43e2d9499589aaee 881 SMART SM00421 813 870 3.6E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0761 bd5a0460091afcca43e2d9499589aaee 881 Pfam PF13191 AAA ATPase domain 2 137 1.5E-15 T 11-10-2018 Patl_0761 bd5a0460091afcca43e2d9499589aaee 881 SUPERFAMILY SSF52540 2 212 3.61E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0761 bd5a0460091afcca43e2d9499589aaee 881 ProSitePatterns PS00622 LuxR-type HTH domain signature. 830 857 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0761 bd5a0460091afcca43e2d9499589aaee 881 SUPERFAMILY SSF48452 418 520 4.83E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0761 bd5a0460091afcca43e2d9499589aaee 881 Gene3D G3DSA:1.25.40.10 346 694 5.5E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1271 c8e2d0f9d040393f70734aeae9e199bb 600 SUPERFAMILY SSF51230 3 73 1.14E-10 T 11-10-2018 IPR011053 Single hybrid motif Patl_1271 c8e2d0f9d040393f70734aeae9e199bb 600 SUPERFAMILY SSF52096 101 354 1.01E-42 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_1271 c8e2d0f9d040393f70734aeae9e199bb 600 Pfam PF01039 Carboxyl transferase domain 121 596 1.4E-68 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Patl_1271 c8e2d0f9d040393f70734aeae9e199bb 600 SUPERFAMILY SSF52096 324 599 1.76E-65 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_1271 c8e2d0f9d040393f70734aeae9e199bb 600 Gene3D G3DSA:3.90.226.10 88 352 2.3E-57 T 11-10-2018 Patl_1271 c8e2d0f9d040393f70734aeae9e199bb 600 Gene3D G3DSA:2.40.50.100 9 74 1.9E-10 T 11-10-2018 Patl_1271 c8e2d0f9d040393f70734aeae9e199bb 600 Gene3D G3DSA:3.90.226.10 360 598 8.7E-71 T 11-10-2018 Patl_1271 c8e2d0f9d040393f70734aeae9e199bb 600 Pfam PF00364 Biotin-requiring enzyme 10 72 5.0E-8 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Patl_1917 3c208aa08e8f816b6ec3065fea481461 394 Gene3D G3DSA:3.40.47.10 142 388 7.6E-135 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_1917 3c208aa08e8f816b6ec3065fea481461 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 392 2.4E-125 T 11-10-2018 IPR002155 Thiolase GO:0016747 Patl_1917 3c208aa08e8f816b6ec3065fea481461 394 PIRSF PIRSF000429 1 394 1.1E-114 T 11-10-2018 IPR002155 Thiolase GO:0016747 Patl_1917 3c208aa08e8f816b6ec3065fea481461 394 Pfam PF00108 Thiolase, N-terminal domain 6 262 2.5E-61 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Patl_1917 3c208aa08e8f816b6ec3065fea481461 394 Gene3D G3DSA:3.40.47.10 5 281 7.6E-135 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_1917 3c208aa08e8f816b6ec3065fea481461 394 Pfam PF02803 Thiolase, C-terminal domain 272 392 3.2E-43 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Patl_1917 3c208aa08e8f816b6ec3065fea481461 394 SUPERFAMILY SSF53901 273 393 4.72E-41 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_1917 3c208aa08e8f816b6ec3065fea481461 394 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Patl_1917 3c208aa08e8f816b6ec3065fea481461 394 SUPERFAMILY SSF53901 1 268 4.4E-67 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_2592 61de45ede11eddaa36b236858d2b6e0d 323 Gene3D G3DSA:3.40.50.460 147 256 6.0E-98 T 11-10-2018 Patl_2592 61de45ede11eddaa36b236858d2b6e0d 323 ProSitePatterns PS00433 Phosphofructokinase signature. 248 266 - T 11-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2592 61de45ede11eddaa36b236858d2b6e0d 323 Pfam PF00365 Phosphofructokinase 8 280 2.8E-97 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2592 61de45ede11eddaa36b236858d2b6e0d 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 1.6E-68 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2592 61de45ede11eddaa36b236858d2b6e0d 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 215 227 1.6E-68 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2592 61de45ede11eddaa36b236858d2b6e0d 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 10 29 1.6E-68 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2592 61de45ede11eddaa36b236858d2b6e0d 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 244 266 1.6E-68 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2592 61de45ede11eddaa36b236858d2b6e0d 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 125 142 1.6E-68 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2592 61de45ede11eddaa36b236858d2b6e0d 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 143 161 1.6E-68 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2592 61de45ede11eddaa36b236858d2b6e0d 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 97 113 1.6E-68 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2592 61de45ede11eddaa36b236858d2b6e0d 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 181 198 1.6E-68 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2592 61de45ede11eddaa36b236858d2b6e0d 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 163 179 1.6E-68 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2592 61de45ede11eddaa36b236858d2b6e0d 323 Gene3D G3DSA:3.40.50.450 8 291 6.0E-98 T 11-10-2018 Patl_2592 61de45ede11eddaa36b236858d2b6e0d 323 PIRSF PIRSF000532 4 321 5.3E-106 T 11-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Patl_2592 61de45ede11eddaa36b236858d2b6e0d 323 SUPERFAMILY SSF53784 3 309 6.8E-104 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_0475 9be3c411e6b2928f7f3d276b7c1ba904 232 SUPERFAMILY SSF54821 108 206 5.62E-41 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0475 9be3c411e6b2928f7f3d276b7c1ba904 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.5E-98 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Patl_0475 9be3c411e6b2928f7f3d276b7c1ba904 232 SUPERFAMILY SSF54814 2 106 4.71E-37 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Patl_0475 9be3c411e6b2928f7f3d276b7c1ba904 232 Gene3D G3DSA:3.30.300.20 17 107 4.8E-29 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Patl_0475 9be3c411e6b2928f7f3d276b7c1ba904 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.213 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Patl_0475 9be3c411e6b2928f7f3d276b7c1ba904 232 Pfam PF07650 KH domain 39 111 5.2E-18 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0475 9be3c411e6b2928f7f3d276b7c1ba904 232 SMART SM00322 60 125 8.5E-7 T 11-10-2018 IPR004087 K Homology domain GO:0003676 Patl_0475 9be3c411e6b2928f7f3d276b7c1ba904 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0475 9be3c411e6b2928f7f3d276b7c1ba904 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.5E-41 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0475 9be3c411e6b2928f7f3d276b7c1ba904 232 Gene3D G3DSA:3.30.1140.32 108 208 1.5E-45 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_3205 e359237fad5bab1e8aa5d2c8139352b2 288 Gene3D G3DSA:3.90.550.10 12 206 6.0E-16 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3205 e359237fad5bab1e8aa5d2c8139352b2 288 SUPERFAMILY SSF53448 8 268 3.54E-25 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_2367 11cc781907d024884aacc49c0961fcdb 620 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 613 3.2E-170 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 Patl_2367 11cc781907d024884aacc49c0961fcdb 620 SUPERFAMILY SSF52096 315 533 1.28E-40 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_2367 11cc781907d024884aacc49c0961fcdb 620 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 352 541 3.7E-51 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 Patl_2367 11cc781907d024884aacc49c0961fcdb 620 Gene3D G3DSA:3.90.226.10 319 544 3.0E-155 T 11-10-2018 Patl_2367 11cc781907d024884aacc49c0961fcdb 620 Gene3D G3DSA:3.90.226.10 94 316 3.0E-155 T 11-10-2018 Patl_2367 11cc781907d024884aacc49c0961fcdb 620 SUPERFAMILY SSF52096 33 285 2.57E-27 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_2367 11cc781907d024884aacc49c0961fcdb 620 Gene3D G3DSA:3.40.1750.10 186 502 3.0E-155 T 11-10-2018 Patl_2367 11cc781907d024884aacc49c0961fcdb 620 Pfam PF01343 Peptidase family S49 396 546 8.3E-47 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Patl_2367 11cc781907d024884aacc49c0961fcdb 620 Pfam PF01343 Peptidase family S49 139 292 3.5E-26 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Patl_2367 11cc781907d024884aacc49c0961fcdb 620 PIRSF PIRSF001217 8 620 2.7E-202 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 Patl_3849 6422dac7711e5f2029f300f01b7af4c6 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Patl_3849 6422dac7711e5f2029f300f01b7af4c6 476 Gene3D G3DSA:3.40.605.10 27 460 3.2E-156 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_3849 6422dac7711e5f2029f300f01b7af4c6 476 Pfam PF00171 Aldehyde dehydrogenase family 20 468 4.0E-143 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Patl_3849 6422dac7711e5f2029f300f01b7af4c6 476 SUPERFAMILY SSF53720 4 474 6.15E-138 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_3849 6422dac7711e5f2029f300f01b7af4c6 476 Gene3D G3DSA:3.40.309.10 252 440 3.2E-156 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Patl_0062 2bee2c7e39cfb53be6d44359d3f9c142 340 Pfam PF00107 Zinc-binding dehydrogenase 174 301 1.6E-26 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_0062 2bee2c7e39cfb53be6d44359d3f9c142 340 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.083 T 11-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 Patl_0062 2bee2c7e39cfb53be6d44359d3f9c142 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 1.8E-32 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_0062 2bee2c7e39cfb53be6d44359d3f9c142 340 Gene3D G3DSA:3.40.50.720 153 286 5.2E-117 T 11-10-2018 Patl_0062 2bee2c7e39cfb53be6d44359d3f9c142 340 SUPERFAMILY SSF50129 7 173 1.67E-52 T 11-10-2018 IPR011032 GroES-like superfamily Patl_0062 2bee2c7e39cfb53be6d44359d3f9c142 340 SUPERFAMILY SSF51735 141 305 1.01E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0062 2bee2c7e39cfb53be6d44359d3f9c142 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Patl_0062 2bee2c7e39cfb53be6d44359d3f9c142 340 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 4 340 8.4E-173 T 11-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 Patl_0062 2bee2c7e39cfb53be6d44359d3f9c142 340 SMART SM00829 12 338 1.5E-4 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_0062 2bee2c7e39cfb53be6d44359d3f9c142 340 Gene3D G3DSA:3.90.180.10 21 328 5.2E-117 T 11-10-2018 Patl_3839 ae5bc8648380550f6da7ded2c304f511 430 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 15 430 9.5E-120 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) Patl_3839 ae5bc8648380550f6da7ded2c304f511 430 SUPERFAMILY SSF56935 22 430 1.04E-96 T 11-10-2018 Patl_3839 ae5bc8648380550f6da7ded2c304f511 430 Gene3D G3DSA:2.40.160.60 22 430 5.3E-135 T 11-10-2018 Patl_0053 df0e4996172f9579026869e8d266b2f4 160 Gene3D G3DSA:3.40.50.620 1 160 6.2E-58 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_0053 df0e4996172f9579026869e8d266b2f4 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 6.6E-60 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Patl_0053 df0e4996172f9579026869e8d266b2f4 160 Pfam PF01467 Cytidylyltransferase-like 6 134 2.0E-22 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Patl_0053 df0e4996172f9579026869e8d266b2f4 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.081 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Patl_0053 df0e4996172f9579026869e8d266b2f4 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 64 2.3E-19 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Patl_0053 df0e4996172f9579026869e8d266b2f4 160 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 1.0E-4 T 11-10-2018 Patl_0053 df0e4996172f9579026869e8d266b2f4 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.9E-53 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Patl_0053 df0e4996172f9579026869e8d266b2f4 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.9E-53 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Patl_0053 df0e4996172f9579026869e8d266b2f4 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.9E-53 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Patl_0053 df0e4996172f9579026869e8d266b2f4 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.9E-53 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Patl_0053 df0e4996172f9579026869e8d266b2f4 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.9E-53 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Patl_0053 df0e4996172f9579026869e8d266b2f4 160 SUPERFAMILY SSF52374 4 157 4.83E-45 T 11-10-2018 Patl_0377 36d2cdf03dd11748379a7bf3be08c9a3 783 SUPERFAMILY SSF56935 36 783 1.03E-119 T 11-10-2018 Patl_0377 36d2cdf03dd11748379a7bf3be08c9a3 783 Pfam PF00593 TonB dependent receptor 332 780 3.4E-41 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0377 36d2cdf03dd11748379a7bf3be08c9a3 783 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 766 783 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site Patl_0377 36d2cdf03dd11748379a7bf3be08c9a3 783 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 167 3.4E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_2868 b78774f78f807e753c530ca022e2b676 129 SMART SM00422 1 70 2.4E-29 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2868 b78774f78f807e753c530ca022e2b676 129 SUPERFAMILY SSF46955 1 126 2.34E-35 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Patl_2868 b78774f78f807e753c530ca022e2b676 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.3E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2868 b78774f78f807e753c530ca022e2b676 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.3E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2868 b78774f78f807e753c530ca022e2b676 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.3E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2868 b78774f78f807e753c530ca022e2b676 129 Gene3D G3DSA:1.10.1660.10 1 125 3.4E-35 T 11-10-2018 Patl_2868 b78774f78f807e753c530ca022e2b676 129 Pfam PF13411 MerR HTH family regulatory protein 1 67 1.4E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Patl_2217 d53216240b5645416935f464074079e6 157 SUPERFAMILY SSF46785 7 66 5.21E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2217 d53216240b5645416935f464074079e6 157 Gene3D G3DSA:1.10.10.10 1 61 5.2E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2217 d53216240b5645416935f464074079e6 157 SUPERFAMILY SSF54909 69 155 1.74E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_2217 d53216240b5645416935f464074079e6 157 SMART SM00344 8 117 1.8E-42 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Patl_2217 d53216240b5645416935f464074079e6 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.7E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_2217 d53216240b5645416935f464074079e6 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.7E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_2217 d53216240b5645416935f464074079e6 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.7E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_2217 d53216240b5645416935f464074079e6 157 Pfam PF01037 Lrp/AsnC ligand binding domain 74 148 5.0E-20 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Patl_2217 d53216240b5645416935f464074079e6 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 55 7.7E-20 T 11-10-2018 Patl_2217 d53216240b5645416935f464074079e6 157 Gene3D G3DSA:3.30.70.920 62 145 7.1E-25 T 11-10-2018 Patl_3582 05304819920bb11eb958a57d50394eb4 166 Pfam PF00011 Hsp20/alpha crystallin family 62 165 2.1E-25 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Patl_3582 05304819920bb11eb958a57d50394eb4 166 SUPERFAMILY SSF49764 32 166 5.23E-39 T 11-10-2018 IPR008978 HSP20-like chaperone Patl_3582 05304819920bb11eb958a57d50394eb4 166 Gene3D G3DSA:2.60.40.790 20 165 7.1E-40 T 11-10-2018 IPR008978 HSP20-like chaperone Patl_1326 d3e83dca87fbf767fee31851b6ed1541 417 PIRSF PIRSF003085 22 417 4.9E-115 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 Patl_1326 d3e83dca87fbf767fee31851b6ed1541 417 SUPERFAMILY SSF53335 20 361 1.33E-87 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_1326 d3e83dca87fbf767fee31851b6ed1541 417 Gene3D G3DSA:3.40.50.150 140 413 2.1E-98 T 11-10-2018 Patl_1326 d3e83dca87fbf767fee31851b6ed1541 417 Pfam PF02353 Mycolic acid cyclopropane synthetase 133 403 2.3E-82 T 11-10-2018 Patl_0060 ab96b2ee8c7538f3a4717e15695d4aaf 815 SUPERFAMILY SSF55073 382 540 1.65E-46 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_0060 ab96b2ee8c7538f3a4717e15695d4aaf 815 Pfam PF00563 EAL domain 555 789 9.5E-73 T 11-10-2018 IPR001633 EAL domain Patl_0060 ab96b2ee8c7538f3a4717e15695d4aaf 815 Gene3D G3DSA:3.30.70.270 371 550 1.0E-53 T 11-10-2018 Patl_0060 ab96b2ee8c7538f3a4717e15695d4aaf 815 Pfam PF00990 Diguanylate cyclase, GGDEF domain 377 533 1.7E-48 T 11-10-2018 IPR000160 GGDEF domain Patl_0060 ab96b2ee8c7538f3a4717e15695d4aaf 815 SMART SM00267 366 538 6.0E-64 T 11-10-2018 IPR000160 GGDEF domain Patl_0060 ab96b2ee8c7538f3a4717e15695d4aaf 815 SUPERFAMILY SSF141868 553 801 2.75E-85 T 11-10-2018 IPR035919 EAL domain superfamily Patl_0060 ab96b2ee8c7538f3a4717e15695d4aaf 815 Gene3D G3DSA:3.20.20.450 551 804 9.8E-92 T 11-10-2018 IPR035919 EAL domain superfamily Patl_0060 ab96b2ee8c7538f3a4717e15695d4aaf 815 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 373 536 5.0E-43 T 11-10-2018 IPR000160 GGDEF domain Patl_0060 ab96b2ee8c7538f3a4717e15695d4aaf 815 SMART SM00052 548 794 3.7E-102 T 11-10-2018 IPR001633 EAL domain Patl_2509 942bdd1c5a65f5ce3b28e0da5f5ad286 166 SUPERFAMILY SSF51261 10 163 2.96E-36 T 11-10-2018 IPR011055 Duplicated hybrid motif Patl_2509 942bdd1c5a65f5ce3b28e0da5f5ad286 166 Gene3D G3DSA:2.70.70.10 10 164 2.7E-33 T 11-10-2018 IPR011055 Duplicated hybrid motif Patl_2509 942bdd1c5a65f5ce3b28e0da5f5ad286 166 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 20 142 1.9E-29 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 Patl_0120 e128b4d0a48523289b5ce622804d7f56 772 Gene3D G3DSA:3.30.2080.10 309 754 3.5E-285 T 11-10-2018 Patl_0120 e128b4d0a48523289b5ce622804d7f56 772 Gene3D G3DSA:1.20.1610.10 460 626 3.5E-285 T 11-10-2018 Patl_0120 e128b4d0a48523289b5ce622804d7f56 772 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 26 755 2.0E-241 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative Patl_0120 e128b4d0a48523289b5ce622804d7f56 772 Gene3D G3DSA:2.70.98.10 39 363 3.5E-285 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Patl_0120 e128b4d0a48523289b5ce622804d7f56 772 SUPERFAMILY SSF48208 275 738 1.96E-46 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Patl_0120 e128b4d0a48523289b5ce622804d7f56 772 Pfam PF07971 Glycosyl hydrolase family 92 251 750 3.1E-177 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 Patl_0120 e128b4d0a48523289b5ce622804d7f56 772 Gene3D G3DSA:1.20.1050.60 364 459 3.5E-285 T 11-10-2018 Patl_3423 893a548b47389d61f33d276621efbb3d 266 SUPERFAMILY SSF56300 1 257 4.06E-52 T 11-10-2018 Patl_3423 893a548b47389d61f33d276621efbb3d 266 PIRSF PIRSF000903 1 266 2.1E-95 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Patl_3423 893a548b47389d61f33d276621efbb3d 266 Pfam PF00149 Calcineurin-like phosphoesterase 5 152 8.3E-12 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Patl_3423 893a548b47389d61f33d276621efbb3d 266 Gene3D G3DSA:3.60.21.10 1 266 4.4E-70 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Patl_3423 893a548b47389d61f33d276621efbb3d 266 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 260 1.2E-88 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 Patl_3731 41b33c62ad818744adeb977f0882dbd3 243 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 232 1.9E-9 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Patl_3731 41b33c62ad818744adeb977f0882dbd3 243 Gene3D G3DSA:3.60.10.10 1 242 8.8E-37 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Patl_3731 41b33c62ad818744adeb977f0882dbd3 243 SUPERFAMILY SSF56219 1 239 1.44E-35 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Patl_2115 85a351a47b2fe3e1054cc950fc213b39 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Patl_2115 85a351a47b2fe3e1054cc950fc213b39 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 252 2.9E-90 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Patl_2115 85a351a47b2fe3e1054cc950fc213b39 257 SUPERFAMILY SSF51556 2 254 8.76E-88 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_2115 85a351a47b2fe3e1054cc950fc213b39 257 Gene3D G3DSA:3.20.20.140 1 256 2.6E-96 T 11-10-2018 Patl_2115 85a351a47b2fe3e1054cc950fc213b39 257 Pfam PF01026 TatD related DNase 3 252 1.1E-78 T 11-10-2018 IPR001130 TatD family GO:0016788 Patl_2115 85a351a47b2fe3e1054cc950fc213b39 257 PIRSF PIRSF005902 1 256 6.3E-84 T 11-10-2018 IPR001130 TatD family GO:0016788 Patl_2115 85a351a47b2fe3e1054cc950fc213b39 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Patl_2831 48f7dfcac04099506a426fba00edf1ba 340 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 64 2.3E-16 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Patl_2831 48f7dfcac04099506a426fba00edf1ba 340 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 329 9.5E-122 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Patl_2831 48f7dfcac04099506a426fba00edf1ba 340 SUPERFAMILY SSF52418 71 328 2.88E-87 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Patl_2831 48f7dfcac04099506a426fba00edf1ba 340 Pfam PF00591 Glycosyl transferase family, a/b domain 73 319 3.3E-95 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Patl_2831 48f7dfcac04099506a426fba00edf1ba 340 SUPERFAMILY SSF47648 3 68 5.76E-17 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Patl_2831 48f7dfcac04099506a426fba00edf1ba 340 Gene3D G3DSA:3.40.1030.10 68 319 3.2E-120 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Patl_2831 48f7dfcac04099506a426fba00edf1ba 340 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 4 333 37.326 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Patl_2831 48f7dfcac04099506a426fba00edf1ba 340 Gene3D G3DSA:1.20.970.10 11 184 3.2E-120 T 11-10-2018 Patl_1349 d1bd08da975624db4903b4ab4ea9a3cb 148 Pfam PF00583 Acetyltransferase (GNAT) family 36 120 1.0E-10 T 11-10-2018 IPR000182 GNAT domain Patl_1349 d1bd08da975624db4903b4ab4ea9a3cb 148 SUPERFAMILY SSF55729 7 146 2.79E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_1349 d1bd08da975624db4903b4ab4ea9a3cb 148 Gene3D G3DSA:3.40.630.30 4 147 4.6E-35 T 11-10-2018 Patl_1349 d1bd08da975624db4903b4ab4ea9a3cb 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 16 142 3.4E-32 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 Patl_3175 4ddb32933a945f6c5ba8a1c38bb614be 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 37.101 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Patl_3175 4ddb32933a945f6c5ba8a1c38bb614be 314 Pfam PF02401 LytB protein 3 282 4.2E-90 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Patl_3175 4ddb32933a945f6c5ba8a1c38bb614be 314 Gene3D G3DSA:3.40.1010.20 97 196 1.5E-109 T 11-10-2018 Patl_3175 4ddb32933a945f6c5ba8a1c38bb614be 314 Gene3D G3DSA:3.40.50.11270 12 96 1.5E-109 T 11-10-2018 Patl_3175 4ddb32933a945f6c5ba8a1c38bb614be 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 3.4E-95 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Patl_3175 4ddb32933a945f6c5ba8a1c38bb614be 314 Gene3D G3DSA:3.40.1010.20 6 282 1.5E-109 T 11-10-2018 Patl_0788 6e69fb9860a54ba8a1ef2afc6ec63af2 280 Pfam PF07589 PEP-CTERM motif 255 277 3.3E-4 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Patl_2399 f1efff03436cbaac441eb2e2d8dba794 323 ProSitePatterns PS00921 Nitrilases / cyanide hydratase active site signature. 177 190 - T 11-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 Patl_2399 f1efff03436cbaac441eb2e2d8dba794 323 Pfam PF00795 Carbon-nitrogen hydrolase 22 293 1.9E-49 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Patl_2399 f1efff03436cbaac441eb2e2d8dba794 323 Gene3D G3DSA:3.60.110.10 14 297 1.4E-85 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Patl_2399 f1efff03436cbaac441eb2e2d8dba794 323 SUPERFAMILY SSF56317 18 312 4.97E-68 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 Gene3D G3DSA:3.30.2060.10 132 217 2.7E-116 T 11-10-2018 Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 Pfam PF00270 DEAD/DEAH box helicase 615 772 8.6E-20 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 SUPERFAMILY SSF52540 13 343 2.28E-102 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 Gene3D G3DSA:2.30.30.840 491 549 6.2E-233 T 11-10-2018 Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 Pfam PF00271 Helicase conserved C-terminal domain 815 917 1.3E-15 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 SMART SM00982 1016 1116 9.0E-49 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 29 1120 27.612 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 SMART SM01058 487 584 2.1E-48 T 11-10-2018 IPR003711 CarD-like/TRCF domain Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 SUPERFAMILY SSF52540 790 998 5.88E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 150 1090 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 SUPERFAMILY SSF52540 531 791 3.02E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 Gene3D G3DSA:3.90.1150.50 1012 1158 2.9E-45 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 Gene3D G3DSA:3.40.50.11140 358 460 1.2E-16 T 11-10-2018 Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 Gene3D G3DSA:3.40.50.11180 25 337 2.7E-116 T 11-10-2018 Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 SMART SM00490 834 918 1.5E-16 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 SMART SM00487 608 798 6.4E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 Gene3D G3DSA:3.40.50.300 550 789 6.2E-233 T 11-10-2018 Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 Pfam PF03461 TRCF domain 1017 1108 5.7E-28 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 Pfam PF02559 CarD-like/TRCF domain 488 583 2.3E-25 T 11-10-2018 IPR003711 CarD-like/TRCF domain Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 SUPERFAMILY SSF143517 1002 1154 8.89E-44 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 SUPERFAMILY SSF52540 352 473 1.27E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 SUPERFAMILY SSF141259 478 556 5.62E-23 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily Patl_1725 55b543d95ef2f13b77e57e55ad174230 1160 Gene3D G3DSA:3.40.50.300 486 998 6.2E-233 T 11-10-2018 Patl_0318 13ea29d1d07da75e216cf3fb1ba9fdba 270 SUPERFAMILY SSF52096 6 268 6.56E-67 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_0318 13ea29d1d07da75e216cf3fb1ba9fdba 270 Gene3D G3DSA:3.90.226.10 10 213 8.1E-60 T 11-10-2018 Patl_0318 13ea29d1d07da75e216cf3fb1ba9fdba 270 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 268 4.1E-50 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Patl_0318 13ea29d1d07da75e216cf3fb1ba9fdba 270 Gene3D G3DSA:1.10.12.10 214 270 1.4E-23 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Patl_2400 25c4b66ac29758c01615328f12b58ad2 692 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 397 662 3.3E-23 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Patl_2400 25c4b66ac29758c01615328f12b58ad2 692 Gene3D G3DSA:3.20.20.70 23 389 3.1E-115 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2400 25c4b66ac29758c01615328f12b58ad2 692 Gene3D G3DSA:3.40.50.720 396 685 5.7E-111 T 11-10-2018 Patl_2400 25c4b66ac29758c01615328f12b58ad2 692 Gene3D G3DSA:3.50.50.60 492 645 5.7E-111 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2400 25c4b66ac29758c01615328f12b58ad2 692 SUPERFAMILY SSF51395 23 383 1.01E-104 T 11-10-2018 Patl_2400 25c4b66ac29758c01615328f12b58ad2 692 SUPERFAMILY SSF51905 355 657 1.07E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2400 25c4b66ac29758c01615328f12b58ad2 692 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 397 419 3.3E-6 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_2400 25c4b66ac29758c01615328f12b58ad2 692 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 516 540 3.3E-6 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_2400 25c4b66ac29758c01615328f12b58ad2 692 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 638 654 7.2E-16 T 11-10-2018 Patl_2400 25c4b66ac29758c01615328f12b58ad2 692 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 398 417 7.2E-16 T 11-10-2018 Patl_2400 25c4b66ac29758c01615328f12b58ad2 692 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 520 538 7.2E-16 T 11-10-2018 Patl_2400 25c4b66ac29758c01615328f12b58ad2 692 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 480 498 7.2E-16 T 11-10-2018 Patl_2400 25c4b66ac29758c01615328f12b58ad2 692 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 27 347 9.6E-76 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Patl_2002 34dbf89609938a5a8065667a21e2e8ca 1612 SUPERFAMILY SSF51735 948 1237 2.1E-25 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2002 34dbf89609938a5a8065667a21e2e8ca 1612 PIRSF PIRSF036761 1 1611 0.0 T 11-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 Patl_2002 34dbf89609938a5a8065667a21e2e8ca 1612 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1604 0.0 T 11-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 Patl_2002 34dbf89609938a5a8065667a21e2e8ca 1612 SUPERFAMILY SSF53223 757 944 1.15E-23 T 11-10-2018 Patl_3538 2f01b4c5535b3146522b25016c276bee 169 SUPERFAMILY SSF88946 4 88 1.8E-15 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Patl_3538 2f01b4c5535b3146522b25016c276bee 169 SUPERFAMILY SSF88659 102 161 1.37E-11 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_3538 2f01b4c5535b3146522b25016c276bee 169 Pfam PF08281 Sigma-70, region 4 107 156 2.4E-8 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_3538 2f01b4c5535b3146522b25016c276bee 169 Pfam PF04542 Sigma-70 region 2 17 82 7.1E-10 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Patl_3538 2f01b4c5535b3146522b25016c276bee 169 Gene3D G3DSA:1.10.1740.10 1 78 6.2E-17 T 11-10-2018 Patl_3538 2f01b4c5535b3146522b25016c276bee 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 160 1.4E-18 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Patl_3538 2f01b4c5535b3146522b25016c276bee 169 Gene3D G3DSA:1.10.10.10 106 162 1.0E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_4244 6d4be231484ea027514af5461d68c2f3 200 PIRSF PIRSF005413 6 200 2.1E-63 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4244 6d4be231484ea027514af5461d68c2f3 200 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 43 186 8.5E-49 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4244 6d4be231484ea027514af5461d68c2f3 200 Gene3D G3DSA:2.60.370.10 67 197 1.4E-41 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4244 6d4be231484ea027514af5461d68c2f3 200 SUPERFAMILY SSF110111 67 189 1.57E-41 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_3852 c02d07edd67a5862accfc5fef95194d6 199 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 32 198 1.4E-50 T 11-10-2018 IPR016476 SH3 domain protein Patl_3852 c02d07edd67a5862accfc5fef95194d6 199 PIRSF PIRSF006158 1 199 2.9E-65 T 11-10-2018 IPR016476 SH3 domain protein Patl_3852 c02d07edd67a5862accfc5fef95194d6 199 SMART SM00287 28 94 1.7E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type Patl_3852 c02d07edd67a5862accfc5fef95194d6 199 Pfam PF08239 Bacterial SH3 domain 40 91 2.2E-9 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type Patl_3852 c02d07edd67a5862accfc5fef95194d6 199 Gene3D G3DSA:2.30.30.40 39 91 7.1E-8 T 11-10-2018 Patl_2648 dcc398896f3b0728704f32166db442e3 269 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Patl_2648 dcc398896f3b0728704f32166db442e3 269 SUPERFAMILY SSF56219 1 268 5.23E-86 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Patl_2648 dcc398896f3b0728704f32166db442e3 269 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 268 1.3E-85 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Patl_2648 dcc398896f3b0728704f32166db442e3 269 Gene3D G3DSA:3.60.10.10 1 269 2.0E-78 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Patl_2648 dcc398896f3b0728704f32166db442e3 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 3.1E-18 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Patl_2648 dcc398896f3b0728704f32166db442e3 269 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 1.3E-98 T 11-10-2018 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 SUPERFAMILY SSF82693 60 154 7.59E-19 T 11-10-2018 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 SUPERFAMILY SSF82714 201 277 4.45E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 SUPERFAMILY SSF82693 155 322 1.67E-8 T 11-10-2018 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 Gene3D G3DSA:1.20.1640.10 518 1013 7.8E-245 T 11-10-2018 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 30 54 4.1E-34 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 372 393 4.1E-34 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 58 76 4.1E-34 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 345 368 4.1E-34 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 4.1E-34 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 4.1E-34 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 4.1E-34 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 Gene3D G3DSA:3.30.70.1430 60 803 7.8E-245 T 11-10-2018 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 Gene3D G3DSA:3.30.70.1430 571 656 7.8E-245 T 11-10-2018 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 Gene3D G3DSA:3.30.2090.10 706 795 7.8E-245 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 SUPERFAMILY SSF82866 305 504 4.84E-32 T 11-10-2018 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 Pfam PF00873 AcrB/AcrD/AcrF family 24 1016 3.7E-178 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 Gene3D G3DSA:3.30.2090.10 197 283 7.8E-245 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 SUPERFAMILY SSF82866 792 1021 1.44E-47 T 11-10-2018 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 Gene3D G3DSA:3.30.70.1320 154 341 7.8E-245 T 11-10-2018 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 Gene3D G3DSA:1.20.1640.10 30 517 7.8E-245 T 11-10-2018 Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 SUPERFAMILY SSF82714 708 791 1.57E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_2231 f28592648dce847035e53aaf02a6cf9f 1040 Gene3D G3DSA:3.30.70.1440 657 853 7.8E-245 T 11-10-2018 Patl_0472 7c831ccfcdfdbfe53727c6ecb589911a 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.616 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Patl_0472 7c831ccfcdfdbfe53727c6ecb589911a 274 SUPERFAMILY SSF50249 4 125 2.78E-47 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_0472 7c831ccfcdfdbfe53727c6ecb589911a 274 SUPERFAMILY SSF50104 127 272 1.26E-61 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Patl_0472 7c831ccfcdfdbfe53727c6ecb589911a 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0472 7c831ccfcdfdbfe53727c6ecb589911a 274 Gene3D G3DSA:2.40.50.140 1 114 2.1E-47 T 11-10-2018 Patl_0472 7c831ccfcdfdbfe53727c6ecb589911a 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.6E-32 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0472 7c831ccfcdfdbfe53727c6ecb589911a 274 PIRSF PIRSF002158 12 274 1.3E-102 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0472 7c831ccfcdfdbfe53727c6ecb589911a 274 Gene3D G3DSA:2.30.30.30 115 195 3.8E-33 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Patl_0472 7c831ccfcdfdbfe53727c6ecb589911a 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 5.5E-57 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Patl_0472 7c831ccfcdfdbfe53727c6ecb589911a 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 5 273 1.9E-130 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Patl_0472 7c831ccfcdfdbfe53727c6ecb589911a 274 Gene3D G3DSA:4.10.950.10 196 274 2.2E-37 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0472 7c831ccfcdfdbfe53727c6ecb589911a 274 SMART SM01383 42 118 1.2E-44 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0472 7c831ccfcdfdbfe53727c6ecb589911a 274 SMART SM01382 124 252 6.1E-93 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Patl_0186 9009feee96709cdcd1644108df23a488 192 Hamap MF_00528 Septum formation protein Maf [maf]. 1 190 31.7 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Patl_0186 9009feee96709cdcd1644108df23a488 192 Pfam PF02545 Maf-like protein 2 185 1.3E-58 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Patl_0186 9009feee96709cdcd1644108df23a488 192 PIRSF PIRSF006305 1 191 1.9E-53 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Patl_0186 9009feee96709cdcd1644108df23a488 192 Gene3D G3DSA:3.90.950.10 1 189 2.4E-68 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Patl_0186 9009feee96709cdcd1644108df23a488 192 SUPERFAMILY SSF52972 1 185 6.54E-63 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Patl_0186 9009feee96709cdcd1644108df23a488 192 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 183 7.5E-54 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Patl_0820 59a72d16723ec1ae21468742337d63e1 627 ProSitePatterns PS00523 Sulfatases signature 1. 89 101 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_0820 59a72d16723ec1ae21468742337d63e1 627 SUPERFAMILY SSF53649 43 473 5.23E-117 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_0820 59a72d16723ec1ae21468742337d63e1 627 Gene3D G3DSA:3.40.720.10 43 406 2.6E-112 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_0820 59a72d16723ec1ae21468742337d63e1 627 Pfam PF00884 Sulfatase 44 370 1.8E-64 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_0820 59a72d16723ec1ae21468742337d63e1 627 Gene3D G3DSA:3.30.1120.10 407 469 2.6E-112 T 11-10-2018 Patl_2840 5d81b801ba15daacd8d3f440372c1da3 226 SUPERFAMILY SSF52172 1 175 4.98E-41 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2840 5d81b801ba15daacd8d3f440372c1da3 226 Gene3D G3DSA:3.40.50.2300 1 122 5.1E-41 T 11-10-2018 Patl_2840 5d81b801ba15daacd8d3f440372c1da3 226 Gene3D G3DSA:1.10.10.10 123 225 1.0E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2840 5d81b801ba15daacd8d3f440372c1da3 226 SMART SM00448 1 112 3.7E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2840 5d81b801ba15daacd8d3f440372c1da3 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 9.1E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_2840 5d81b801ba15daacd8d3f440372c1da3 226 SMART SM00862 145 220 6.0E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_2840 5d81b801ba15daacd8d3f440372c1da3 226 Pfam PF00072 Response regulator receiver domain 3 113 5.9E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1509 9f8a8ddbdf752fe908062e799bc0c6ea 251 SUPERFAMILY SSF64288 66 247 1.16E-26 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Patl_1509 9f8a8ddbdf752fe908062e799bc0c6ea 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 9.4E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_1509 9f8a8ddbdf752fe908062e799bc0c6ea 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 9.4E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_1509 9f8a8ddbdf752fe908062e799bc0c6ea 251 SMART SM00345 19 78 1.3E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_1509 9f8a8ddbdf752fe908062e799bc0c6ea 251 SMART SM00866 99 242 6.5E-13 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Patl_1509 9f8a8ddbdf752fe908062e799bc0c6ea 251 SUPERFAMILY SSF46785 10 87 4.08E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1509 9f8a8ddbdf752fe908062e799bc0c6ea 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 78 2.1E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_1509 9f8a8ddbdf752fe908062e799bc0c6ea 251 Gene3D G3DSA:1.10.10.10 10 78 1.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1509 9f8a8ddbdf752fe908062e799bc0c6ea 251 Pfam PF07702 UTRA domain 101 241 1.3E-13 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Patl_1509 9f8a8ddbdf752fe908062e799bc0c6ea 251 Gene3D G3DSA:3.40.1410.10 90 248 1.2E-20 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Patl_2391 086e00881f748d3edf0c0d530224de7a 333 Pfam PF00107 Zinc-binding dehydrogenase 175 295 3.8E-23 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_2391 086e00881f748d3edf0c0d530224de7a 333 Gene3D G3DSA:3.90.180.10 10 331 4.0E-118 T 11-10-2018 Patl_2391 086e00881f748d3edf0c0d530224de7a 333 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Patl_2391 086e00881f748d3edf0c0d530224de7a 333 SUPERFAMILY SSF51735 138 302 1.35E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2391 086e00881f748d3edf0c0d530224de7a 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 1.9E-23 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_2391 086e00881f748d3edf0c0d530224de7a 333 Gene3D G3DSA:3.40.50.720 149 303 4.0E-118 T 11-10-2018 Patl_2391 086e00881f748d3edf0c0d530224de7a 333 SUPERFAMILY SSF50129 2 331 5.97E-43 T 11-10-2018 IPR011032 GroES-like superfamily Patl_2391 086e00881f748d3edf0c0d530224de7a 333 SMART SM00829 12 331 2.5E-6 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_2445 413c2fa4d4d963271834683954104c41 567 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 51 530 2.8E-71 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 Patl_2464 c7079932e89e7aeec6cdc568ff2b8235 389 Pfam PF13181 Tetratricopeptide repeat 217 241 0.017 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2464 c7079932e89e7aeec6cdc568ff2b8235 389 Pfam PF13181 Tetratricopeptide repeat 183 214 0.11 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2464 c7079932e89e7aeec6cdc568ff2b8235 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 33.623 T 11-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 Patl_2464 c7079932e89e7aeec6cdc568ff2b8235 389 Gene3D G3DSA:1.25.40.10 20 348 1.1E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2464 c7079932e89e7aeec6cdc568ff2b8235 389 SUPERFAMILY SSF48452 27 156 3.54E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2464 c7079932e89e7aeec6cdc568ff2b8235 389 SMART SM00028 35 68 350.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2464 c7079932e89e7aeec6cdc568ff2b8235 389 SMART SM00028 182 215 10.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2464 c7079932e89e7aeec6cdc568ff2b8235 389 SMART SM00028 69 102 190.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2464 c7079932e89e7aeec6cdc568ff2b8235 389 SMART SM00028 216 249 59.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2464 c7079932e89e7aeec6cdc568ff2b8235 389 SMART SM00028 107 140 290.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2464 c7079932e89e7aeec6cdc568ff2b8235 389 SUPERFAMILY SSF48452 113 241 5.69E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2138 ed967222099c9551e4d1561b2f38d431 109 Pfam PF07027 Protein of unknown function (DUF1318) 21 108 8.6E-31 T 11-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 Patl_2138 ed967222099c9551e4d1561b2f38d431 109 PIRSF PIRSF025560 1 108 2.9E-32 T 11-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 Patl_1109 734c4faa5fe9ffc21147dc7009db28d5 487 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 336 444 2.1E-16 T 11-10-2018 IPR025299 CstA, C-terminal domain Patl_1109 734c4faa5fe9ffc21147dc7009db28d5 487 Pfam PF02554 Carbon starvation protein CstA 1 144 1.8E-30 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 Patl_4091 fdca31f2f26cc25e670a1aa0f843119f 147 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 7 142 7.9E-23 T 11-10-2018 IPR011971 Conserved hypothetical protein CHP02284 Patl_4091 fdca31f2f26cc25e670a1aa0f843119f 147 Gene3D G3DSA:1.20.1260.10 1 147 3.5E-23 T 11-10-2018 IPR012347 Ferritin-like Patl_4091 fdca31f2f26cc25e670a1aa0f843119f 147 Pfam PF09537 Domain of unknown function (DUF2383) 6 115 1.3E-30 T 11-10-2018 IPR019052 Domain of unknown function DUF2383 Patl_3821 3af3e85275953884254242f210578143 324 SMART SM00354 1 55 2.6E-4 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_3821 3af3e85275953884254242f210578143 324 Gene3D G3DSA:3.40.50.2300 141 288 4.4E-47 T 11-10-2018 Patl_3821 3af3e85275953884254242f210578143 324 SUPERFAMILY SSF47413 1 43 4.13E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_3821 3af3e85275953884254242f210578143 324 Gene3D G3DSA:1.10.260.40 1 39 2.9E-8 T 11-10-2018 Patl_3821 3af3e85275953884254242f210578143 324 SUPERFAMILY SSF53822 42 312 1.07E-38 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Patl_3821 3af3e85275953884254242f210578143 324 Gene3D G3DSA:3.40.50.2300 40 304 4.4E-47 T 11-10-2018 Patl_3821 3af3e85275953884254242f210578143 324 Pfam PF13377 Periplasmic binding protein-like domain 183 323 1.0E-23 T 11-10-2018 Patl_1431 d46fca9176b0ca006631fe5b3d3479b4 416 Gene3D G3DSA:1.10.760.10 30 87 8.8E-6 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_1431 d46fca9176b0ca006631fe5b3d3479b4 416 Gene3D G3DSA:2.130.10.10 262 415 3.7E-5 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_1431 d46fca9176b0ca006631fe5b3d3479b4 416 SUPERFAMILY SSF63829 105 341 2.35E-37 T 11-10-2018 Patl_1431 d46fca9176b0ca006631fe5b3d3479b4 416 Gene3D G3DSA:2.130.10.10 90 261 4.3E-40 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_1431 d46fca9176b0ca006631fe5b3d3479b4 416 SUPERFAMILY SSF46626 31 87 4.02E-5 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.1E-120 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 SUPERFAMILY SSF51905 1 313 1.69E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 2.0E-49 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.3E-38 T 11-10-2018 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.3E-38 T 11-10-2018 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.3E-38 T 11-10-2018 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.3E-38 T 11-10-2018 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.3E-38 T 11-10-2018 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 Gene3D G3DSA:3.50.50.60 9 311 8.2E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.4E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.4E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.4E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 1.4E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.4E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.4E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.4E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.4E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.4E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Patl_2370 990ed83d87efcc406b82fb2dbadaab6e 316 Gene3D G3DSA:3.50.50.60 118 244 8.2E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1534 44d34c8559f9aff01a070005bde98954 439 SUPERFAMILY SSF109604 203 357 3.77E-5 T 11-10-2018 Patl_1534 44d34c8559f9aff01a070005bde98954 439 Pfam PF13487 HD domain 251 311 1.6E-12 T 11-10-2018 Patl_1534 44d34c8559f9aff01a070005bde98954 439 Pfam PF00072 Response regulator receiver domain 14 124 2.3E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1534 44d34c8559f9aff01a070005bde98954 439 Gene3D G3DSA:1.10.3210.10 173 366 7.7E-24 T 11-10-2018 Patl_1534 44d34c8559f9aff01a070005bde98954 439 SUPERFAMILY SSF52172 12 177 1.18E-32 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1534 44d34c8559f9aff01a070005bde98954 439 SMART SM00448 12 124 2.2E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1534 44d34c8559f9aff01a070005bde98954 439 Gene3D G3DSA:3.40.50.2300 2 149 3.0E-32 T 11-10-2018 Patl_0320 055220f0a17feab65194c4a19d198068 603 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 8 350 2.1E-114 T 11-10-2018 IPR010839 Acyclic terpene utilisation Patl_1601 4b6d179358ce1aa91bbed52241322a03 467 SUPERFAMILY SSF47384 227 304 3.34E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_1601 4b6d179358ce1aa91bbed52241322a03 467 SMART SM00387 353 465 1.7E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1601 4b6d179358ce1aa91bbed52241322a03 467 SMART SM00388 242 310 3.5E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1601 4b6d179358ce1aa91bbed52241322a03 467 Gene3D G3DSA:1.10.287.130 186 305 1.6E-15 T 11-10-2018 Patl_1601 4b6d179358ce1aa91bbed52241322a03 467 Gene3D G3DSA:3.30.565.10 318 467 1.1E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1601 4b6d179358ce1aa91bbed52241322a03 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 464 1.0E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1601 4b6d179358ce1aa91bbed52241322a03 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 305 3.9E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1601 4b6d179358ce1aa91bbed52241322a03 467 SUPERFAMILY SSF55874 313 463 1.1E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3698 9363226bb99672173679728bb08a4fd7 210 SUPERFAMILY SSF47616 82 205 5.99E-24 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Patl_3698 9363226bb99672173679728bb08a4fd7 210 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.5E-14 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Patl_3698 9363226bb99672173679728bb08a4fd7 210 SUPERFAMILY SSF52833 6 90 2.37E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_3698 9363226bb99672173679728bb08a4fd7 210 Gene3D G3DSA:1.20.1050.10 89 192 1.1E-79 T 11-10-2018 Patl_3698 9363226bb99672173679728bb08a4fd7 210 Gene3D G3DSA:3.40.30.10 11 200 1.1E-79 T 11-10-2018 Patl_3698 9363226bb99672173679728bb08a4fd7 210 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 192 8.6E-9 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal Patl_4008 1df6f95368a123b58263d8d53e97ae1b 452 Pfam PF14296 O-antigen polysaccharide polymerase Wzy 21 445 3.7E-18 T 11-10-2018 IPR029468 O-antigen polysaccharide polymerase Wzy Patl_2206 eba863cfec4c3aa7e018233cb7542493 477 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 3.8E-150 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Patl_2206 eba863cfec4c3aa7e018233cb7542493 477 Gene3D G3DSA:3.40.50.12160 3 132 5.8E-34 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Patl_2206 eba863cfec4c3aa7e018233cb7542493 477 SUPERFAMILY SSF102114 129 372 2.35E-61 T 11-10-2018 Patl_2206 eba863cfec4c3aa7e018233cb7542493 477 Gene3D G3DSA:3.80.30.20 145 377 3.7E-81 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Patl_2206 eba863cfec4c3aa7e018233cb7542493 477 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Patl_2206 eba863cfec4c3aa7e018233cb7542493 477 Pfam PF01938 TRAM domain 380 440 2.3E-18 T 11-10-2018 IPR002792 TRAM domain Patl_2206 eba863cfec4c3aa7e018233cb7542493 477 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 441 73.749 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Patl_2206 eba863cfec4c3aa7e018233cb7542493 477 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 439 3.8E-198 T 11-10-2018 Patl_2206 eba863cfec4c3aa7e018233cb7542493 477 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 6.5E-30 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Patl_2206 eba863cfec4c3aa7e018233cb7542493 477 SMART SM00729 147 367 5.2E-58 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Patl_2206 eba863cfec4c3aa7e018233cb7542493 477 Pfam PF04055 Radical SAM superfamily 151 325 2.7E-28 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Patl_3045 645ff11b974dfb365caad596891db6ae 266 PRINTS PR01003 Flagellar assembly protein FliH signature 212 228 6.2E-10 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Patl_3045 645ff11b974dfb365caad596891db6ae 266 PRINTS PR01003 Flagellar assembly protein FliH signature 38 57 6.2E-10 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Patl_3045 645ff11b974dfb365caad596891db6ae 266 PRINTS PR01003 Flagellar assembly protein FliH signature 84 106 6.2E-10 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 Patl_3045 645ff11b974dfb365caad596891db6ae 266 Pfam PF09811 Essential protein Yae1, N terminal 74 112 1.2E-7 T 11-10-2018 IPR019191 Essential protein Yae1, N-terminal Patl_3045 645ff11b974dfb365caad596891db6ae 266 Pfam PF02108 Flagellar assembly protein FliH 120 246 8.0E-36 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Patl_1297 72ca6f0e90e8be8ca4192a8958824167 434 SUPERFAMILY SSF55031 218 340 4.78E-8 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Patl_1297 72ca6f0e90e8be8ca4192a8958824167 434 Gene3D G3DSA:3.30.70.360 217 342 1.1E-94 T 11-10-2018 Patl_1297 72ca6f0e90e8be8ca4192a8958824167 434 Pfam PF07687 Peptidase dimerisation domain 214 332 5.2E-12 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain Patl_1297 72ca6f0e90e8be8ca4192a8958824167 434 Gene3D G3DSA:3.40.630.10 43 419 1.1E-94 T 11-10-2018 Patl_1297 72ca6f0e90e8be8ca4192a8958824167 434 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 139 178 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Patl_1297 72ca6f0e90e8be8ca4192a8958824167 434 Pfam PF01546 Peptidase family M20/M25/M40 108 422 7.0E-20 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 Patl_1297 72ca6f0e90e8be8ca4192a8958824167 434 SUPERFAMILY SSF53187 27 432 1.51E-36 T 11-10-2018 Patl_3228 4835497099132c5b01e369b1b65fba4f 138 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 1.6E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3228 4835497099132c5b01e369b1b65fba4f 138 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 27 1.1E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3228 4835497099132c5b01e369b1b65fba4f 138 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3510 b7bbb4f3e7bd46e555c66ebe8faaca18 130 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Patl_3510 b7bbb4f3e7bd46e555c66ebe8faaca18 130 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 127 1.6E-39 T 11-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 Patl_3510 b7bbb4f3e7bd46e555c66ebe8faaca18 130 SUPERFAMILY SSF55811 2 126 1.11E-33 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Patl_3510 b7bbb4f3e7bd46e555c66ebe8faaca18 130 Pfam PF00293 NUDIX domain 6 116 2.5E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Patl_3510 b7bbb4f3e7bd46e555c66ebe8faaca18 130 Gene3D G3DSA:3.90.79.10 1 130 5.9E-33 T 11-10-2018 Patl_3510 b7bbb4f3e7bd46e555c66ebe8faaca18 130 PRINTS PR00502 NUDIX hydrolase family signature 46 61 9.1E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Patl_3510 b7bbb4f3e7bd46e555c66ebe8faaca18 130 PRINTS PR00502 NUDIX hydrolase family signature 32 46 9.1E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Patl_2637 44bc3ccda9eef93e318aac541163b98d 341 Gene3D G3DSA:3.90.180.10 30 337 1.9E-99 T 11-10-2018 Patl_2637 44bc3ccda9eef93e318aac541163b98d 341 Gene3D G3DSA:3.40.50.720 136 280 1.9E-99 T 11-10-2018 Patl_2637 44bc3ccda9eef93e318aac541163b98d 341 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 9 337 3.4E-117 T 11-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 Patl_2637 44bc3ccda9eef93e318aac541163b98d 341 SUPERFAMILY SSF51735 126 289 2.12E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2637 44bc3ccda9eef93e318aac541163b98d 341 SUPERFAMILY SSF50129 16 150 3.65E-31 T 11-10-2018 IPR011032 GroES-like superfamily Patl_2637 44bc3ccda9eef93e318aac541163b98d 341 Pfam PF13602 Zinc-binding dehydrogenase 199 338 1.1E-16 T 11-10-2018 Patl_2637 44bc3ccda9eef93e318aac541163b98d 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 37 98 1.3E-7 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_2637 44bc3ccda9eef93e318aac541163b98d 341 SMART SM00829 20 339 4.4E-12 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_0622 3dfd759427bbf670642b8faff5f503c1 162 Gene3D G3DSA:3.10.129.10 9 161 1.5E-37 T 11-10-2018 Patl_0622 3dfd759427bbf670642b8faff5f503c1 162 SUPERFAMILY SSF54637 23 161 1.64E-20 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_0622 3dfd759427bbf670642b8faff5f503c1 162 Pfam PF14539 Domain of unknown function (DUF4442) 25 159 4.7E-31 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 Patl_3488 1db03072f1a7663b8d24b9a8ed48ae2f 453 Pfam PF01321 Creatinase/Prolidase N-terminal domain 63 196 1.3E-15 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Patl_3488 1db03072f1a7663b8d24b9a8ed48ae2f 453 Gene3D G3DSA:3.90.230.10 196 427 1.6E-65 T 11-10-2018 Patl_3488 1db03072f1a7663b8d24b9a8ed48ae2f 453 Gene3D G3DSA:3.40.350.10 32 195 4.8E-44 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Patl_3488 1db03072f1a7663b8d24b9a8ed48ae2f 453 SUPERFAMILY SSF55920 196 423 1.83E-59 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like Patl_3488 1db03072f1a7663b8d24b9a8ed48ae2f 453 Pfam PF00557 Metallopeptidase family M24 205 410 1.8E-48 T 11-10-2018 IPR000994 Peptidase M24 Patl_3488 1db03072f1a7663b8d24b9a8ed48ae2f 453 SUPERFAMILY SSF53092 43 195 8.2E-24 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Patl_0901 eb6125702b07b4e6e9520ec8b6eac566 246 SMART SM00895 111 233 5.2E-21 T 11-10-2018 IPR011711 GntR, C-terminal Patl_0901 eb6125702b07b4e6e9520ec8b6eac566 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 82 1.9E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_0901 eb6125702b07b4e6e9520ec8b6eac566 246 Pfam PF07729 FCD domain 111 231 5.8E-24 T 11-10-2018 IPR011711 GntR, C-terminal Patl_0901 eb6125702b07b4e6e9520ec8b6eac566 246 SUPERFAMILY SSF46785 18 86 1.63E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0901 eb6125702b07b4e6e9520ec8b6eac566 246 SUPERFAMILY SSF48008 109 240 5.23E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_0901 eb6125702b07b4e6e9520ec8b6eac566 246 SMART SM00345 23 82 5.4E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_0901 eb6125702b07b4e6e9520ec8b6eac566 246 Gene3D G3DSA:1.10.10.10 14 88 5.6E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0901 eb6125702b07b4e6e9520ec8b6eac566 246 Gene3D G3DSA:1.20.120.530 109 245 4.5E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_1505 34cc6989fca18d4df954f8c0cfcd96c0 351 Gene3D G3DSA:3.60.110.10 5 305 1.6E-50 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Patl_1505 34cc6989fca18d4df954f8c0cfcd96c0 351 SUPERFAMILY SSF56317 32 284 7.33E-39 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Patl_1505 34cc6989fca18d4df954f8c0cfcd96c0 351 Pfam PF00795 Carbon-nitrogen hydrolase 39 281 6.3E-25 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Patl_0100 6f1987a4328033fc5c809e322247518c 141 Pfam PF01047 MarR family 36 93 2.1E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_0100 6f1987a4328033fc5c809e322247518c 141 Gene3D G3DSA:1.10.10.10 1 140 1.2E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0100 6f1987a4328033fc5c809e322247518c 141 SUPERFAMILY SSF46785 7 138 2.43E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0100 6f1987a4328033fc5c809e322247518c 141 SMART SM00347 29 128 2.2E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_2955 6e398eafae00d18b7b923906bd1a79e1 556 SUPERFAMILY SSF56235 1 196 1.2E-57 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_2955 6e398eafae00d18b7b923906bd1a79e1 556 SUPERFAMILY SSF52402 211 481 4.97E-73 T 11-10-2018 Patl_2955 6e398eafae00d18b7b923906bd1a79e1 556 Gene3D G3DSA:3.60.20.10 2 193 1.8E-72 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_2955 6e398eafae00d18b7b923906bd1a79e1 556 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 374 8.9E-122 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Patl_2955 6e398eafae00d18b7b923906bd1a79e1 556 Pfam PF00733 Asparagine synthase 213 513 2.9E-94 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Patl_2955 6e398eafae00d18b7b923906bd1a79e1 556 Pfam PF13537 Glutamine amidotransferase domain 48 165 2.1E-40 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Patl_2955 6e398eafae00d18b7b923906bd1a79e1 556 PIRSF PIRSF001589 362 513 8.2E-29 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Patl_2955 6e398eafae00d18b7b923906bd1a79e1 556 PIRSF PIRSF001589 1 367 4.1E-112 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Patl_2955 6e398eafae00d18b7b923906bd1a79e1 556 Gene3D G3DSA:3.40.50.620 194 516 2.3E-114 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_4134 913bffb2a113d6e2f39f4c59fdf32d96 273 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 37 54 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Patl_4134 913bffb2a113d6e2f39f4c59fdf32d96 273 Gene3D G3DSA:3.20.20.100 6 273 1.1E-91 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Patl_4134 913bffb2a113d6e2f39f4c59fdf32d96 273 SUPERFAMILY SSF51430 10 269 1.57E-82 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Patl_4134 913bffb2a113d6e2f39f4c59fdf32d96 273 PRINTS PR00069 Aldo-keto reductase signature 89 107 1.9E-46 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Patl_4134 913bffb2a113d6e2f39f4c59fdf32d96 273 PRINTS PR00069 Aldo-keto reductase signature 33 57 1.9E-46 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Patl_4134 913bffb2a113d6e2f39f4c59fdf32d96 273 PRINTS PR00069 Aldo-keto reductase signature 194 218 1.9E-46 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Patl_4134 913bffb2a113d6e2f39f4c59fdf32d96 273 PRINTS PR00069 Aldo-keto reductase signature 157 186 1.9E-46 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Patl_4134 913bffb2a113d6e2f39f4c59fdf32d96 273 PRINTS PR00069 Aldo-keto reductase signature 122 139 1.9E-46 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Patl_4134 913bffb2a113d6e2f39f4c59fdf32d96 273 Pfam PF00248 Aldo/keto reductase family 15 258 6.2E-50 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain Patl_4134 913bffb2a113d6e2f39f4c59fdf32d96 273 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 122 139 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Patl_4134 913bffb2a113d6e2f39f4c59fdf32d96 273 PIRSF PIRSF000097 5 272 4.3E-67 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Patl_3291 73cc1ced8525b8c7e6e5988a4737647d 165 Pfam PF07603 Protein of unknown function (DUF1566) 39 162 5.5E-28 T 11-10-2018 IPR011460 Protein of unknown function DUF1566 Patl_3396 5e25a45efd9408840ca9ce35a540a8ce 244 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 15 230 4.3E-120 T 11-10-2018 IPR014063 Arsenate resistance ArsH Patl_3396 5e25a45efd9408840ca9ce35a540a8ce 244 Pfam PF03358 NADPH-dependent FMN reductase 38 181 1.5E-27 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Patl_3396 5e25a45efd9408840ca9ce35a540a8ce 244 SUPERFAMILY SSF52218 28 230 1.55E-63 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_3396 5e25a45efd9408840ca9ce35a540a8ce 244 Gene3D G3DSA:3.40.50.360 5 244 2.9E-75 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_0091 0c0d5e96d1513ff5183a34e2a6d11798 454 PIRSF PIRSF006603 2 452 2.5E-102 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Patl_0091 0c0d5e96d1513ff5183a34e2a6d11798 454 Pfam PF01554 MatE 247 408 1.1E-26 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Patl_0091 0c0d5e96d1513ff5183a34e2a6d11798 454 Pfam PF01554 MatE 22 181 4.7E-30 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Patl_0091 0c0d5e96d1513ff5183a34e2a6d11798 454 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 416 8.8E-57 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Patl_2435 3ac84e46718d20cce34111b8e0fcb196 282 SUPERFAMILY SSF51735 2 234 9.15E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2435 3ac84e46718d20cce34111b8e0fcb196 282 Gene3D G3DSA:3.90.25.10 138 257 1.0E-62 T 11-10-2018 Patl_2435 3ac84e46718d20cce34111b8e0fcb196 282 Gene3D G3DSA:3.40.50.720 4 259 1.0E-62 T 11-10-2018 Patl_2435 3ac84e46718d20cce34111b8e0fcb196 282 Pfam PF13460 NAD(P)H-binding 8 145 1.2E-19 T 11-10-2018 IPR016040 NAD(P)-binding domain Patl_0847 1f82538772f7242e9ed32db70928a515 350 SUPERFAMILY SSF51556 22 346 8.51E-81 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_0847 1f82538772f7242e9ed32db70928a515 350 Gene3D G3DSA:3.20.20.140 21 348 1.4E-90 T 11-10-2018 Patl_0847 1f82538772f7242e9ed32db70928a515 350 Pfam PF04909 Amidohydrolase 75 345 4.8E-45 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Patl_0400 880ab804ac04f19c2c78a74f61bd1df3 359 Gene3D G3DSA:3.40.50.1100 54 159 9.1E-67 T 11-10-2018 Patl_0400 880ab804ac04f19c2c78a74f61bd1df3 359 SUPERFAMILY SSF53686 26 341 5.24E-67 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Patl_0400 880ab804ac04f19c2c78a74f61bd1df3 359 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 39 321 8.6E-42 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Patl_0400 880ab804ac04f19c2c78a74f61bd1df3 359 Gene3D G3DSA:3.40.50.1100 37 328 9.1E-67 T 11-10-2018 Patl_2677 c61e9a35f796398d8bd7a2ab2740c8fa 120 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 42 91 3.0E-15 T 11-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Patl_2677 c61e9a35f796398d8bd7a2ab2740c8fa 120 SUPERFAMILY SSF69118 13 109 1.19E-27 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Patl_2677 c61e9a35f796398d8bd7a2ab2740c8fa 120 Gene3D G3DSA:1.20.1290.10 3 117 1.1E-35 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Patl_2677 c61e9a35f796398d8bd7a2ab2740c8fa 120 Pfam PF02627 Carboxymuconolactone decarboxylase family 25 107 1.0E-19 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Patl_0405 ee22d635c2ef1e30ac3f449e4124f016 550 Pfam PF04389 Peptidase family M28 310 503 3.1E-45 T 11-10-2018 IPR007484 Peptidase M28 Patl_0405 ee22d635c2ef1e30ac3f449e4124f016 550 SUPERFAMILY SSF52025 143 241 4.19E-6 T 11-10-2018 Patl_0405 ee22d635c2ef1e30ac3f449e4124f016 550 Gene3D G3DSA:3.50.30.30 110 301 1.2E-51 T 11-10-2018 Patl_0405 ee22d635c2ef1e30ac3f449e4124f016 550 Pfam PF02225 PA domain 144 235 6.7E-8 T 11-10-2018 IPR003137 PA domain Patl_0405 ee22d635c2ef1e30ac3f449e4124f016 550 SUPERFAMILY SSF53187 42 530 2.34E-61 T 11-10-2018 Patl_0405 ee22d635c2ef1e30ac3f449e4124f016 550 Gene3D G3DSA:3.40.630.10 62 502 1.2E-51 T 11-10-2018 Patl_0258 c8db5b9707f957d8b53e63633a414517 200 SUPERFAMILY SSF50182 107 170 4.25E-10 T 11-10-2018 IPR010920 LSM domain superfamily Patl_0258 c8db5b9707f957d8b53e63633a414517 200 Gene3D G3DSA:2.30.30.60 123 175 8.2E-8 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Patl_0258 c8db5b9707f957d8b53e63633a414517 200 Pfam PF00924 Mechanosensitive ion channel 62 177 5.6E-11 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Patl_0352 c80af3aaa6f2de3f556b19356b8ddae3 214 Pfam PF00578 AhpC/TSA family 43 190 2.9E-26 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_0352 c80af3aaa6f2de3f556b19356b8ddae3 214 SUPERFAMILY SSF52833 39 206 3.18E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_0352 c80af3aaa6f2de3f556b19356b8ddae3 214 Gene3D G3DSA:3.40.30.10 35 210 4.0E-35 T 11-10-2018 Patl_0479 573d87b7dde5d9f6c4c7233e1371689c 471 Gene3D G3DSA:3.30.750.170 25 375 2.5E-67 T 11-10-2018 Patl_0479 573d87b7dde5d9f6c4c7233e1371689c 471 Pfam PF03572 Peptidase family S41 196 346 6.0E-16 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Patl_0479 573d87b7dde5d9f6c4c7233e1371689c 471 SUPERFAMILY SSF50156 73 180 2.0E-10 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Patl_0479 573d87b7dde5d9f6c4c7233e1371689c 471 SUPERFAMILY SSF52096 16 383 3.48E-30 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_0479 573d87b7dde5d9f6c4c7233e1371689c 471 Gene3D G3DSA:3.90.226.10 180 416 2.5E-67 T 11-10-2018 Patl_0479 573d87b7dde5d9f6c4c7233e1371689c 471 Gene3D G3DSA:2.30.42.10 77 179 2.5E-67 T 11-10-2018 Patl_0654 3fc9cea17d49bc93c523d22381decc59 249 SMART SM00893 23 211 3.8E-68 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Patl_0654 3fc9cea17d49bc93c523d22381decc59 249 Pfam PF01012 Electron transfer flavoprotein domain 30 206 3.5E-45 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Patl_0654 3fc9cea17d49bc93c523d22381decc59 249 Gene3D G3DSA:3.40.50.620 1 248 1.2E-85 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_0654 3fc9cea17d49bc93c523d22381decc59 249 PIRSF PIRSF000090 1 249 7.5E-84 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Patl_0654 3fc9cea17d49bc93c523d22381decc59 249 SUPERFAMILY SSF52402 1 244 8.37E-85 T 11-10-2018 Patl_0654 3fc9cea17d49bc93c523d22381decc59 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 11-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Patl_3831 182b7dd1e4d815747feefdaffca12ed1 218 Pfam PF00849 RNA pseudouridylate synthase 23 168 7.5E-32 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_3831 182b7dd1e4d815747feefdaffca12ed1 218 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 11 217 6.1E-61 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_3831 182b7dd1e4d815747feefdaffca12ed1 218 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_3831 182b7dd1e4d815747feefdaffca12ed1 218 SUPERFAMILY SSF55120 14 218 1.76E-64 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_3831 182b7dd1e4d815747feefdaffca12ed1 218 Gene3D G3DSA:3.30.2350.10 4 218 4.1E-71 T 11-10-2018 Patl_2381 8f7a47d87dce6ecc69836a634498fbf1 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 454 1.3E-145 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Patl_2381 8f7a47d87dce6ecc69836a634498fbf1 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 3.1E-52 T 11-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 Patl_2381 8f7a47d87dce6ecc69836a634498fbf1 455 SUPERFAMILY SSF48557 10 453 1.15E-106 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 Patl_2381 8f7a47d87dce6ecc69836a634498fbf1 455 Pfam PF00206 Lyase 14 312 1.0E-67 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal Patl_2381 8f7a47d87dce6ecc69836a634498fbf1 455 Gene3D G3DSA:1.10.40.30 382 445 6.8E-157 T 11-10-2018 Patl_2381 8f7a47d87dce6ecc69836a634498fbf1 455 Gene3D G3DSA:1.10.275.10 1 117 2.8E-49 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal Patl_2381 8f7a47d87dce6ecc69836a634498fbf1 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Patl_2381 8f7a47d87dce6ecc69836a634498fbf1 455 Gene3D G3DSA:1.20.200.10 118 446 6.8E-157 T 11-10-2018 Patl_2381 8f7a47d87dce6ecc69836a634498fbf1 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 4.3E-18 T 11-10-2018 IPR000362 Fumarate lyase family Patl_2381 8f7a47d87dce6ecc69836a634498fbf1 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 4.3E-18 T 11-10-2018 IPR000362 Fumarate lyase family Patl_2381 8f7a47d87dce6ecc69836a634498fbf1 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 4.3E-18 T 11-10-2018 IPR000362 Fumarate lyase family Patl_2381 8f7a47d87dce6ecc69836a634498fbf1 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 4.3E-18 T 11-10-2018 IPR000362 Fumarate lyase family Patl_1323 168608839970e7fe3fc10c51a9b0ca72 305 Gene3D G3DSA:3.30.1330.60 144 292 3.0E-41 T 11-10-2018 IPR036737 OmpA-like domain superfamily Patl_1323 168608839970e7fe3fc10c51a9b0ca72 305 SUPERFAMILY SSF103088 173 290 8.11E-26 T 11-10-2018 IPR036737 OmpA-like domain superfamily Patl_1323 168608839970e7fe3fc10c51a9b0ca72 305 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 5 56 4.4E-18 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain Patl_1323 168608839970e7fe3fc10c51a9b0ca72 305 Pfam PF00691 OmpA family 186 284 5.1E-13 T 11-10-2018 IPR006665 OmpA-like domain Patl_1139 701697a9b78a3e0270e19bf4511a6839 377 Gene3D G3DSA:1.10.1610.10 34 375 4.6E-120 T 11-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Patl_1139 701697a9b78a3e0270e19bf4511a6839 377 Gene3D G3DSA:3.40.50.10210 75 358 4.6E-120 T 11-10-2018 Patl_1139 701697a9b78a3e0270e19bf4511a6839 377 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 24 375 2.1E-125 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Patl_1139 701697a9b78a3e0270e19bf4511a6839 377 Pfam PF02277 Phosphoribosyltransferase 20 375 2.8E-127 T 11-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Patl_1139 701697a9b78a3e0270e19bf4511a6839 377 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 22 377 34.942 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Patl_1139 701697a9b78a3e0270e19bf4511a6839 377 SUPERFAMILY SSF52733 16 376 2.35E-108 T 11-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Patl_0571 b3b65ddb230305cf8370decb1ccd4941 281 Gene3D G3DSA:3.40.50.300 1 161 4.7E-8 T 11-10-2018 Patl_0571 b3b65ddb230305cf8370decb1ccd4941 281 PIRSF PIRSF005052 1 281 8.2E-109 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 Patl_0571 b3b65ddb230305cf8370decb1ccd4941 281 Pfam PF03668 P-loop ATPase protein family 1 281 1.0E-108 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 Patl_0571 b3b65ddb230305cf8370decb1ccd4941 281 SUPERFAMILY SSF52540 1 152 1.89E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0571 b3b65ddb230305cf8370decb1ccd4941 281 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 40.827 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 Patl_0036 0bb3765ba2877c81c6686fbe3738f8e2 229 SUPERFAMILY SSF52540 46 158 5.38E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0036 0bb3765ba2877c81c6686fbe3738f8e2 229 Gene3D G3DSA:3.40.50.300 50 159 1.6E-29 T 11-10-2018 Patl_0036 0bb3765ba2877c81c6686fbe3738f8e2 229 Pfam PF00154 recA bacterial DNA recombination protein 23 129 8.6E-7 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Patl_0036 0bb3765ba2877c81c6686fbe3738f8e2 229 PIRSF PIRSF037290 1 218 4.1E-60 T 11-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 Pfam PF00069 Protein kinase domain 81 291 1.3E-42 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 SUPERFAMILY SSF48452 688 856 2.64E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 SMART SM00028 485 518 0.04 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 SMART SM00028 610 643 0.28 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 SMART SM00028 835 868 1.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 SMART SM00028 694 727 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 SMART SM00028 778 811 200.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 SUPERFAMILY SSF56112 73 300 7.69E-59 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Patl_0961 ac809ffc546110c8c144afd24d952e11 911 SMART SM00220 81 366 6.6E-42 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 Gene3D G3DSA:1.25.40.10 482 672 1.6E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 Gene3D G3DSA:1.25.40.10 673 763 5.2E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 SUPERFAMILY SSF48452 609 721 2.79E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 87 112 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 Gene3D G3DSA:1.10.510.10 168 374 1.1E-37 T 11-10-2018 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 Gene3D G3DSA:1.25.40.10 773 911 4.7E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 SUPERFAMILY SSF48452 488 638 1.18E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 Gene3D G3DSA:3.30.200.20 22 165 5.1E-23 T 11-10-2018 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 Pfam PF13424 Tetratricopeptide repeat 570 641 5.3E-11 T 11-10-2018 Patl_0961 ac809ffc546110c8c144afd24d952e11 911 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 201 213 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Patl_0427 ba6925b742bced66f27c6c3dcf33d471 395 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 266 292 5.8E-41 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Patl_0427 ba6925b742bced66f27c6c3dcf33d471 395 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 85 105 5.8E-41 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Patl_0427 ba6925b742bced66f27c6c3dcf33d471 395 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 54 75 5.8E-41 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Patl_0427 ba6925b742bced66f27c6c3dcf33d471 395 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 174 192 5.8E-41 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Patl_0427 ba6925b742bced66f27c6c3dcf33d471 395 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 216 241 5.8E-41 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Patl_0427 ba6925b742bced66f27c6c3dcf33d471 395 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 318 339 5.8E-41 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Patl_0427 ba6925b742bced66f27c6c3dcf33d471 395 Gene3D G3DSA:3.90.770.10 65 379 1.1E-110 T 11-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Patl_0427 ba6925b742bced66f27c6c3dcf33d471 395 SUPERFAMILY SSF55035 120 235 2.35E-37 T 11-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Patl_0427 ba6925b742bced66f27c6c3dcf33d471 395 Gene3D G3DSA:3.30.70.420 119 235 1.1E-110 T 11-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Patl_0427 ba6925b742bced66f27c6c3dcf33d471 395 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 23 393 1.0E-118 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Patl_0427 ba6925b742bced66f27c6c3dcf33d471 395 SUPERFAMILY SSF56542 10 382 3.27E-70 T 11-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 3.5E-27 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Gene3D G3DSA:3.90.1100.10 18 174 5.5E-58 T 11-10-2018 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Gene3D G3DSA:3.90.1100.10 644 714 1.2E-20 T 11-10-2018 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 514 581 1.1E-28 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Pfam PF04563 RNA polymerase beta subunit 26 501 5.4E-53 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Gene3D G3DSA:2.40.50.100 715 789 1.3E-31 T 11-10-2018 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 152 222 2.3E-5 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 356 455 2.0E-14 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Gene3D G3DSA:3.90.1100.10 443 625 6.7E-69 T 11-10-2018 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Gene3D G3DSA:2.40.270.10 791 834 2.8E-6 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 592 657 4.3E-22 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Gene3D G3DSA:3.90.1800.10 1252 1306 8.1E-11 T 11-10-2018 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.253 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Gene3D G3DSA:3.90.1110.10 318 442 2.0E-35 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Gene3D G3DSA:2.40.270.10 1035 1242 2.4E-87 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1064 1076 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 SUPERFAMILY SSF64484 11 1340 0.0 T 11-10-2018 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Gene3D G3DSA:2.40.50.150 835 953 2.5E-43 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0598 9cef5a2e2799d8e37779245f61d13476 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 718 1264 1.9E-157 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0793 e740c979b392175ffc1d12bc8df70b02 352 SUPERFAMILY SSF142754 28 340 2.09E-109 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Patl_0793 e740c979b392175ffc1d12bc8df70b02 352 Gene3D G3DSA:3.40.50.10800 200 295 1.6E-95 T 11-10-2018 Patl_0793 e740c979b392175ffc1d12bc8df70b02 352 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 26 341 6.3E-115 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Patl_0793 e740c979b392175ffc1d12bc8df70b02 352 Gene3D G3DSA:3.40.50.10800 115 339 1.6E-95 T 11-10-2018 Patl_0793 e740c979b392175ffc1d12bc8df70b02 352 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 346 66.653 T 11-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Patl_0793 e740c979b392175ffc1d12bc8df70b02 352 Pfam PF02445 Quinolinate synthetase A protein 32 339 4.4E-103 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Patl_0793 e740c979b392175ffc1d12bc8df70b02 352 Gene3D G3DSA:3.40.50.10800 31 321 1.6E-95 T 11-10-2018 Patl_3278 291e8f96757bd42af47a19d314832957 1006 Pfam PF00593 TonB dependent receptor 441 1005 1.7E-38 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3278 291e8f96757bd42af47a19d314832957 1006 SUPERFAMILY SSF56935 32 1006 1.04E-92 T 11-10-2018 Patl_3278 291e8f96757bd42af47a19d314832957 1006 Gene3D G3DSA:2.170.130.10 30 175 5.1E-18 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_3278 291e8f96757bd42af47a19d314832957 1006 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 165 3.3E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3278 291e8f96757bd42af47a19d314832957 1006 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 39 1006 2.5E-199 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor Patl_2690 41d4138ac1cf9c374d7fe62b5d2354f1 395 Gene3D G3DSA:3.30.360.10 144 388 5.3E-119 T 11-10-2018 Patl_2690 41d4138ac1cf9c374d7fe62b5d2354f1 395 SUPERFAMILY SSF55347 145 320 7.19E-34 T 11-10-2018 Patl_2690 41d4138ac1cf9c374d7fe62b5d2354f1 395 SUPERFAMILY SSF51735 5 170 2.25E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2690 41d4138ac1cf9c374d7fe62b5d2354f1 395 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 152 222 1.4E-4 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 Patl_2690 41d4138ac1cf9c374d7fe62b5d2354f1 395 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 137 5.7E-20 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Patl_2690 41d4138ac1cf9c374d7fe62b5d2354f1 395 Gene3D G3DSA:3.40.50.720 12 364 5.3E-119 T 11-10-2018 Patl_3858 526f84359e09002e5087dbfd5b19f256 162 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 37 52 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Patl_3858 526f84359e09002e5087dbfd5b19f256 162 Gene3D G3DSA:3.30.1330.50 1 162 3.1E-71 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Patl_3858 526f84359e09002e5087dbfd5b19f256 162 SUPERFAMILY SSF69765 1 158 4.45E-67 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Patl_3858 526f84359e09002e5087dbfd5b19f256 162 Pfam PF02542 YgbB family 4 156 5.4E-67 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Patl_3858 526f84359e09002e5087dbfd5b19f256 162 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 4 158 4.1E-70 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Patl_3858 526f84359e09002e5087dbfd5b19f256 162 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 3 158 35.482 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Patl_4246 67799b78d28d2d214f992996b60fe828 384 SUPERFAMILY SSF49503 118 317 2.13E-51 T 11-10-2018 IPR008972 Cupredoxin Patl_4246 67799b78d28d2d214f992996b60fe828 384 Gene3D G3DSA:2.60.40.420 123 262 2.2E-52 T 11-10-2018 IPR008972 Cupredoxin Patl_4246 67799b78d28d2d214f992996b60fe828 384 PRINTS PR01166 Cytochrome c oxidase subunit II signature 100 120 1.0E-38 T 11-10-2018 Patl_4246 67799b78d28d2d214f992996b60fe828 384 PRINTS PR01166 Cytochrome c oxidase subunit II signature 193 213 1.0E-38 T 11-10-2018 Patl_4246 67799b78d28d2d214f992996b60fe828 384 PRINTS PR01166 Cytochrome c oxidase subunit II signature 88 100 1.0E-38 T 11-10-2018 Patl_4246 67799b78d28d2d214f992996b60fe828 384 PRINTS PR01166 Cytochrome c oxidase subunit II signature 213 230 1.0E-38 T 11-10-2018 Patl_4246 67799b78d28d2d214f992996b60fe828 384 PRINTS PR01166 Cytochrome c oxidase subunit II signature 231 248 1.0E-38 T 11-10-2018 Patl_4246 67799b78d28d2d214f992996b60fe828 384 PRINTS PR01166 Cytochrome c oxidase subunit II signature 122 141 1.0E-38 T 11-10-2018 Patl_4246 67799b78d28d2d214f992996b60fe828 384 PRINTS PR01166 Cytochrome c oxidase subunit II signature 169 190 1.0E-38 T 11-10-2018 Patl_4246 67799b78d28d2d214f992996b60fe828 384 SUPERFAMILY SSF46626 282 374 8.57E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_4246 67799b78d28d2d214f992996b60fe828 384 Gene3D G3DSA:1.10.287.90 29 122 2.3E-24 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4246 67799b78d28d2d214f992996b60fe828 384 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 194 242 - T 11-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4246 67799b78d28d2d214f992996b60fe828 384 SUPERFAMILY SSF81464 31 120 3.27E-26 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4246 67799b78d28d2d214f992996b60fe828 384 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 40 258 7.2E-58 T 11-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4246 67799b78d28d2d214f992996b60fe828 384 Gene3D G3DSA:1.10.760.10 266 384 1.4E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_4246 67799b78d28d2d214f992996b60fe828 384 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 286 359 2.9E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4246 67799b78d28d2d214f992996b60fe828 384 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 30 111 1.5E-12 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4246 67799b78d28d2d214f992996b60fe828 384 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 127 246 8.2E-37 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_3375 3527a17d98fd4ffd57d9f5815c4f58b3 177 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 19 156 1.8E-16 T 11-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) Patl_3999 ebcc83b37c0e1e8b5887ba82f44f360d 345 Gene3D G3DSA:3.90.78.10 227 344 4.6E-39 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_3999 ebcc83b37c0e1e8b5887ba82f44f360d 345 Gene3D G3DSA:3.30.43.10 15 78 5.5E-10 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Patl_3999 ebcc83b37c0e1e8b5887ba82f44f360d 345 SUPERFAMILY SSF56194 210 342 2.75E-43 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_3999 ebcc83b37c0e1e8b5887ba82f44f360d 345 Gene3D G3DSA:3.30.465.10 79 226 8.3E-55 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Patl_3999 ebcc83b37c0e1e8b5887ba82f44f360d 345 SUPERFAMILY SSF56176 17 204 1.14E-36 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Patl_3999 ebcc83b37c0e1e8b5887ba82f44f360d 345 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 345 70.869 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_3999 ebcc83b37c0e1e8b5887ba82f44f360d 345 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 214 337 3.4E-29 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_3999 ebcc83b37c0e1e8b5887ba82f44f360d 345 Pfam PF01565 FAD binding domain 45 152 3.1E-16 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Patl_3999 ebcc83b37c0e1e8b5887ba82f44f360d 345 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 17 338 1.1E-68 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_3613 5d4782abc115d65f813f923278a25fbd 85 Gene3D G3DSA:3.40.30.10 1 84 6.4E-27 T 11-10-2018 Patl_3613 5d4782abc115d65f813f923278a25fbd 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 7.3E-37 T 11-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 Patl_3613 5d4782abc115d65f813f923278a25fbd 85 SUPERFAMILY SSF52833 1 84 2.48E-27 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_3613 5d4782abc115d65f813f923278a25fbd 85 Pfam PF00462 Glutaredoxin 4 64 8.2E-21 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Patl_3613 5d4782abc115d65f813f923278a25fbd 85 PRINTS PR00160 Glutaredoxin signature 4 22 8.8E-16 T 11-10-2018 IPR014025 Glutaredoxin subgroup Patl_3613 5d4782abc115d65f813f923278a25fbd 85 PRINTS PR00160 Glutaredoxin signature 47 60 8.8E-16 T 11-10-2018 IPR014025 Glutaredoxin subgroup Patl_3613 5d4782abc115d65f813f923278a25fbd 85 PRINTS PR00160 Glutaredoxin signature 61 74 8.8E-16 T 11-10-2018 IPR014025 Glutaredoxin subgroup Patl_3613 5d4782abc115d65f813f923278a25fbd 85 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Patl_1557 155926590ae27e157d231affc8d29af9 321 Pfam PF05036 Sporulation related domain 245 311 1.0E-7 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 Patl_1557 155926590ae27e157d231affc8d29af9 321 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 16 174 25.077 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 Patl_1557 155926590ae27e157d231affc8d29af9 321 Pfam PF03330 Lytic transglycolase 82 170 9.1E-27 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain Patl_1557 155926590ae27e157d231affc8d29af9 321 Gene3D G3DSA:2.40.40.10 82 175 6.9E-38 T 11-10-2018 IPR036908 RlpA-like domain superfamily Patl_1557 155926590ae27e157d231affc8d29af9 321 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 85 180 4.5E-46 T 11-10-2018 IPR012997 Rare lipoprotein A Patl_1557 155926590ae27e157d231affc8d29af9 321 SUPERFAMILY SSF50685 74 170 1.99E-10 T 11-10-2018 IPR036908 RlpA-like domain superfamily Patl_1557 155926590ae27e157d231affc8d29af9 321 SUPERFAMILY SSF110997 244 315 4.32E-9 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Patl_3786 4cfeceee9f59f7e60bfae41cb8a61f5b 211 PIRSF PIRSF020606 6 208 3.9E-58 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 Patl_3786 4cfeceee9f59f7e60bfae41cb8a61f5b 211 Pfam PF09997 Predicted membrane protein (DUF2238) 46 186 1.1E-51 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 Patl_0964 50768d486e7bdeb51204411c336df6d2 336 Gene3D G3DSA:3.30.70.100 1 101 3.4E-35 T 11-10-2018 Patl_0964 50768d486e7bdeb51204411c336df6d2 336 Pfam PF00581 Rhodanese-like domain 120 215 2.2E-9 T 11-10-2018 IPR001763 Rhodanese-like domain Patl_0964 50768d486e7bdeb51204411c336df6d2 336 Gene3D G3DSA:3.40.250.10 102 254 1.2E-52 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Patl_0964 50768d486e7bdeb51204411c336df6d2 336 SUPERFAMILY SSF52821 99 244 2.74E-34 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Patl_0964 50768d486e7bdeb51204411c336df6d2 336 Hamap MF_00469 UPF0176 protein YceA [yceA]. 7 259 45.905 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 Patl_0964 50768d486e7bdeb51204411c336df6d2 336 SMART SM00450 118 219 3.6E-23 T 11-10-2018 IPR001763 Rhodanese-like domain Patl_2829 0d4f924d30ffdac0530fe98a03350dc6 544 SUPERFAMILY SSF56322 15 522 5.27E-147 T 11-10-2018 IPR005801 ADC synthase GO:0009058 Patl_2829 0d4f924d30ffdac0530fe98a03350dc6 544 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 200 5.2E-15 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Patl_2829 0d4f924d30ffdac0530fe98a03350dc6 544 Pfam PF00425 chorismate binding enzyme 254 514 3.4E-84 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Patl_2829 0d4f924d30ffdac0530fe98a03350dc6 544 Gene3D G3DSA:3.60.120.10 7 529 6.2E-171 T 11-10-2018 IPR005801 ADC synthase GO:0009058 Patl_2829 0d4f924d30ffdac0530fe98a03350dc6 544 PRINTS PR00095 Anthranilate synthase component I signature 362 375 4.4E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Patl_2829 0d4f924d30ffdac0530fe98a03350dc6 544 PRINTS PR00095 Anthranilate synthase component I signature 376 389 4.4E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Patl_2829 0d4f924d30ffdac0530fe98a03350dc6 544 PRINTS PR00095 Anthranilate synthase component I signature 471 485 4.4E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Patl_2829 0d4f924d30ffdac0530fe98a03350dc6 544 PRINTS PR00095 Anthranilate synthase component I signature 456 470 4.4E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Patl_2829 0d4f924d30ffdac0530fe98a03350dc6 544 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 526 6.3E-218 T 11-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Patl_2829 0d4f924d30ffdac0530fe98a03350dc6 544 PIRSF PIRSF001373 4 533 1.5E-254 T 11-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Patl_2351 fc8ab618a1e3073560ce5a05e0cc531c 324 Pfam PF04982 HPP family 61 182 1.0E-35 T 11-10-2018 IPR007065 HPP Patl_3190 b48d87a212c56d79a7e60bd14b4e6cc8 122 Pfam PF11399 Protein of unknown function (DUF3192) 17 118 1.7E-40 T 11-10-2018 IPR021534 Protein of unknown function DUF3192 Patl_2184 e2819ab9a22fb05d1532644d78075ab7 558 Gene3D G3DSA:3.40.50.620 29 247 3.2E-102 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_2184 e2819ab9a22fb05d1532644d78075ab7 558 SUPERFAMILY SSF52374 28 346 6.82E-96 T 11-10-2018 Patl_2184 e2819ab9a22fb05d1532644d78075ab7 558 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 27 337 4.9E-118 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Patl_2184 e2819ab9a22fb05d1532644d78075ab7 558 Gene3D G3DSA:2.40.240.10 464 551 1.7E-31 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Patl_2184 e2819ab9a22fb05d1532644d78075ab7 558 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 533 1.2E-60 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Patl_2184 e2819ab9a22fb05d1532644d78075ab7 558 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 555 7.7E-282 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Patl_2184 e2819ab9a22fb05d1532644d78075ab7 558 SUPERFAMILY SSF50715 340 551 3.03E-76 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Patl_2184 e2819ab9a22fb05d1532644d78075ab7 558 Gene3D G3DSA:1.10.1160.10 261 339 5.6E-34 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 Patl_2184 e2819ab9a22fb05d1532644d78075ab7 558 Gene3D G3DSA:3.90.800.10 101 209 3.2E-102 T 11-10-2018 Patl_2184 e2819ab9a22fb05d1532644d78075ab7 558 Gene3D G3DSA:2.40.240.10 348 463 2.0E-46 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Patl_2184 e2819ab9a22fb05d1532644d78075ab7 558 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 1.2E-9 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Patl_2184 e2819ab9a22fb05d1532644d78075ab7 558 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 1.2E-9 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Patl_2184 e2819ab9a22fb05d1532644d78075ab7 558 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 1.2E-9 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Patl_2184 e2819ab9a22fb05d1532644d78075ab7 558 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 1.2E-9 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Patl_2184 e2819ab9a22fb05d1532644d78075ab7 558 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_2184 e2819ab9a22fb05d1532644d78075ab7 558 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 553 52.043 T 11-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 Patl_3153 89b719fab0fab95258d1ab013f0a9544 333 Gene3D G3DSA:2.50.20.10 37 224 7.7E-54 T 11-10-2018 Patl_3153 89b719fab0fab95258d1ab013f0a9544 333 Pfam PF17188 MucB/RseB C-terminal domain 233 328 1.6E-20 T 11-10-2018 IPR033436 MucB/RseB, C-terminal Patl_3153 89b719fab0fab95258d1ab013f0a9544 333 PIRSF PIRSF005427 18 333 3.6E-77 T 11-10-2018 IPR005588 MucB/RseB Patl_3153 89b719fab0fab95258d1ab013f0a9544 333 Pfam PF03888 MucB/RseB N-terminal domain 40 222 1.1E-56 T 11-10-2018 IPR033434 MucB/RseB, N-terminal Patl_3153 89b719fab0fab95258d1ab013f0a9544 333 Gene3D G3DSA:3.30.200.100 233 333 7.4E-21 T 11-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily Patl_0565 b155c7878fee60088f6708250d55e8f1 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 10 183 6.8E-49 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 Patl_0565 b155c7878fee60088f6708250d55e8f1 187 Gene3D G3DSA:2.60.450.10 60 187 1.4E-41 T 11-10-2018 Patl_0565 b155c7878fee60088f6708250d55e8f1 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 10 184 1.1E-40 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related Patl_0565 b155c7878fee60088f6708250d55e8f1 187 PIRSF PIRSF028513 1 187 1.7E-80 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 Patl_0565 b155c7878fee60088f6708250d55e8f1 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 2 186 23.976 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 Patl_0184 1610d4f24eadbcd440136a0dd69aa254 286 Pfam PF04085 rod shape-determining protein MreC 125 269 4.0E-35 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Patl_0184 1610d4f24eadbcd440136a0dd69aa254 286 Gene3D G3DSA:2.40.10.350 180 257 5.0E-33 T 11-10-2018 Patl_0184 1610d4f24eadbcd440136a0dd69aa254 286 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 273 4.9E-71 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Patl_0184 1610d4f24eadbcd440136a0dd69aa254 286 PIRSF PIRSF038471 2 283 4.2E-78 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Patl_0184 1610d4f24eadbcd440136a0dd69aa254 286 Gene3D G3DSA:2.40.10.340 121 266 5.0E-33 T 11-10-2018 Patl_2144 63f75e79d8027467e7357a257d6dcd53 652 PIRSF PIRSF001084 1 644 5.3E-171 T 11-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_2144 63f75e79d8027467e7357a257d6dcd53 652 Pfam PF08532 Beta-galactosidase trimerisation domain 409 604 8.3E-31 T 11-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_2144 63f75e79d8027467e7357a257d6dcd53 652 Pfam PF02449 Beta-galactosidase 16 396 3.1E-130 T 11-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_2144 63f75e79d8027467e7357a257d6dcd53 652 SUPERFAMILY SSF51445 9 383 3.9E-116 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_2144 63f75e79d8027467e7357a257d6dcd53 652 SUPERFAMILY SSF52317 405 609 3.25E-42 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_2144 63f75e79d8027467e7357a257d6dcd53 652 Gene3D G3DSA:3.40.50.880 408 613 1.2E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_2144 63f75e79d8027467e7357a257d6dcd53 652 Gene3D G3DSA:3.20.20.80 1 407 1.8E-119 T 11-10-2018 Patl_2203 5c90c4cef3a71d30e4e34a8ca166ea66 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.5E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2203 5c90c4cef3a71d30e4e34a8ca166ea66 303 SUPERFAMILY SSF46785 2 86 1.36E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2203 5c90c4cef3a71d30e4e34a8ca166ea66 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2203 5c90c4cef3a71d30e4e34a8ca166ea66 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2203 5c90c4cef3a71d30e4e34a8ca166ea66 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2203 5c90c4cef3a71d30e4e34a8ca166ea66 303 Pfam PF03466 LysR substrate binding domain 90 291 7.3E-36 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_2203 5c90c4cef3a71d30e4e34a8ca166ea66 303 SUPERFAMILY SSF53850 91 296 9.59E-39 T 11-10-2018 Patl_2203 5c90c4cef3a71d30e4e34a8ca166ea66 303 Gene3D G3DSA:3.40.190.10 103 288 5.1E-58 T 11-10-2018 Patl_2203 5c90c4cef3a71d30e4e34a8ca166ea66 303 Gene3D G3DSA:1.10.10.10 7 95 3.4E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2203 5c90c4cef3a71d30e4e34a8ca166ea66 303 Gene3D G3DSA:3.40.190.10 163 261 5.1E-58 T 11-10-2018 Patl_1906 f99ad3b7487c4f8df145de09d133141e 369 Pfam PF00144 Beta-lactamase 31 341 9.3E-61 T 11-10-2018 IPR001466 Beta-lactamase-related Patl_1906 f99ad3b7487c4f8df145de09d133141e 369 SUPERFAMILY SSF56601 37 354 4.1E-78 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Patl_1906 f99ad3b7487c4f8df145de09d133141e 369 Gene3D G3DSA:3.40.710.10 21 353 1.5E-81 T 11-10-2018 Patl_1480 066e643f182075c2d69e7734677be967 153 Gene3D G3DSA:1.10.10.10 1 56 3.0E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1480 066e643f182075c2d69e7734677be967 153 SUPERFAMILY SSF46785 2 62 2.31E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1480 066e643f182075c2d69e7734677be967 153 SMART SM00344 3 113 1.3E-39 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Patl_1480 066e643f182075c2d69e7734677be967 153 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 1.4E-19 T 11-10-2018 Patl_1480 066e643f182075c2d69e7734677be967 153 Gene3D G3DSA:3.30.70.920 57 141 2.3E-25 T 11-10-2018 Patl_1480 066e643f182075c2d69e7734677be967 153 SUPERFAMILY SSF54909 63 153 2.28E-19 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_1480 066e643f182075c2d69e7734677be967 153 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 1.1E-21 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Patl_1480 066e643f182075c2d69e7734677be967 153 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Patl_1480 066e643f182075c2d69e7734677be967 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 2.3E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_1480 066e643f182075c2d69e7734677be967 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 2.3E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_1480 066e643f182075c2d69e7734677be967 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 2.3E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_3058 e793cf4789eb4bf030c83b93b2cc0206 208 SUPERFAMILY SSF53335 36 122 1.56E-14 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3058 e793cf4789eb4bf030c83b93b2cc0206 208 Gene3D G3DSA:3.40.50.150 6 151 1.3E-16 T 11-10-2018 Patl_3058 e793cf4789eb4bf030c83b93b2cc0206 208 Pfam PF08242 Methyltransferase domain 55 123 2.2E-8 T 11-10-2018 IPR013217 Methyltransferase type 12 Patl_3640 e3f7822ace990162a45b8e77c2b9d074 756 SUPERFAMILY SSF51126 40 485 3.64E-93 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor Patl_3640 e3f7822ace990162a45b8e77c2b9d074 756 Gene3D G3DSA:2.160.20.10 482 657 1.1E-9 T 11-10-2018 IPR012334 Pectin lyase fold Patl_3640 e3f7822ace990162a45b8e77c2b9d074 756 Gene3D G3DSA:2.160.20.10 38 481 1.2E-118 T 11-10-2018 IPR012334 Pectin lyase fold Patl_3640 e3f7822ace990162a45b8e77c2b9d074 756 SUPERFAMILY SSF51126 481 741 1.1E-28 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor Patl_3640 e3f7822ace990162a45b8e77c2b9d074 756 Pfam PF14592 Chondroitinase B 40 435 1.8E-113 T 11-10-2018 IPR039513 PL-6 family Patl_0870 cd3c8919e9b4c164f8195ee76ff21987 534 SUPERFAMILY SSF53649 9 524 3.42E-136 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_0870 cd3c8919e9b4c164f8195ee76ff21987 534 Pfam PF00884 Sulfatase 10 417 3.3E-73 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_0870 cd3c8919e9b4c164f8195ee76ff21987 534 Gene3D G3DSA:3.40.720.10 7 448 1.4E-125 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_0870 cd3c8919e9b4c164f8195ee76ff21987 534 Gene3D G3DSA:3.30.1120.10 451 530 4.3E-23 T 11-10-2018 Patl_1986 479a1d36e39b4da6eb5c0d1f72d38cd2 204 Pfam PF01025 GrpE 31 193 2.3E-50 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Patl_1986 479a1d36e39b4da6eb5c0d1f72d38cd2 204 PRINTS PR00773 GrpE protein signature 146 161 5.9E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Patl_1986 479a1d36e39b4da6eb5c0d1f72d38cd2 204 PRINTS PR00773 GrpE protein signature 173 192 5.9E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Patl_1986 479a1d36e39b4da6eb5c0d1f72d38cd2 204 PRINTS PR00773 GrpE protein signature 63 79 5.9E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Patl_1986 479a1d36e39b4da6eb5c0d1f72d38cd2 204 PRINTS PR00773 GrpE protein signature 91 106 5.9E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Patl_1986 479a1d36e39b4da6eb5c0d1f72d38cd2 204 Gene3D G3DSA:3.90.20.20 3 137 5.0E-30 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Patl_1986 479a1d36e39b4da6eb5c0d1f72d38cd2 204 ProSitePatterns PS01071 grpE protein signature. 149 192 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Patl_1986 479a1d36e39b4da6eb5c0d1f72d38cd2 204 Gene3D G3DSA:2.30.22.10 138 194 2.9E-24 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Patl_1986 479a1d36e39b4da6eb5c0d1f72d38cd2 204 SUPERFAMILY SSF58014 41 138 6.8E-28 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Patl_1986 479a1d36e39b4da6eb5c0d1f72d38cd2 204 Hamap MF_01151 Protein GrpE [grpE]. 3 194 21.335 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Patl_1986 479a1d36e39b4da6eb5c0d1f72d38cd2 204 SUPERFAMILY SSF51064 140 195 4.45E-19 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Patl_3136 7baa78542038b5424407d560f26413f7 212 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 1.0E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Patl_3136 7baa78542038b5424407d560f26413f7 212 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 1.0E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Patl_3136 7baa78542038b5424407d560f26413f7 212 PRINTS PR00127 Clp protease catalytic subunit P signature 28 43 1.0E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Patl_3136 7baa78542038b5424407d560f26413f7 212 PRINTS PR00127 Clp protease catalytic subunit P signature 120 139 1.0E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Patl_3136 7baa78542038b5424407d560f26413f7 212 PRINTS PR00127 Clp protease catalytic subunit P signature 177 196 1.0E-52 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Patl_3136 7baa78542038b5424407d560f26413f7 212 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 121 134 - T 11-10-2018 IPR033135 ClpP, histidine active site Patl_3136 7baa78542038b5424407d560f26413f7 212 SUPERFAMILY SSF52096 20 201 9.94E-73 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_3136 7baa78542038b5424407d560f26413f7 212 Gene3D G3DSA:3.90.226.10 6 206 1.2E-81 T 11-10-2018 Patl_3136 7baa78542038b5424407d560f26413f7 212 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 12 202 43.583 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Patl_3136 7baa78542038b5424407d560f26413f7 212 Pfam PF00574 Clp protease 22 201 4.3E-87 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Patl_3136 7baa78542038b5424407d560f26413f7 212 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 99 110 - T 11-10-2018 IPR018215 ClpP, Ser active site Patl_3136 7baa78542038b5424407d560f26413f7 212 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 11 200 3.4E-105 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Patl_2072 71d5dcf0e69a99f841fe6384f46d6a62 201 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 5 181 2.3E-83 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Patl_2072 71d5dcf0e69a99f841fe6384f46d6a62 201 SUPERFAMILY SSF46626 17 197 1.05E-30 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_2072 71d5dcf0e69a99f841fe6384f46d6a62 201 Gene3D G3DSA:1.10.760.10 42 201 1.2E-74 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_2072 71d5dcf0e69a99f841fe6384f46d6a62 201 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 5 181 1.1E-81 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO Patl_0573 f2cc71879a29e13713ae838a6fc9703d 256 SUPERFAMILY SSF54060 26 245 8.24E-50 T 11-10-2018 Patl_0573 f2cc71879a29e13713ae838a6fc9703d 256 SMART SM00477 39 238 6.9E-37 T 11-10-2018 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 Patl_0573 f2cc71879a29e13713ae838a6fc9703d 256 Gene3D G3DSA:3.40.570.10 18 256 3.0E-66 T 11-10-2018 Patl_0573 f2cc71879a29e13713ae838a6fc9703d 256 SMART SM00892 38 238 1.1E-42 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 Patl_0573 f2cc71879a29e13713ae838a6fc9703d 256 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 101 109 - T 11-10-2018 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 Patl_0573 f2cc71879a29e13713ae838a6fc9703d 256 Pfam PF01223 DNA/RNA non-specific endonuclease 31 234 7.2E-37 T 11-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 Patl_1685 b27bff1d98ff1b1fc070d464a9944fa0 255 SUPERFAMILY SSF53639 17 221 9.42E-58 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Patl_1685 b27bff1d98ff1b1fc070d464a9944fa0 255 SMART SM01007 22 201 3.8E-55 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal Patl_1685 b27bff1d98ff1b1fc070d464a9944fa0 255 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 200 7.8E-43 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal Patl_1685 b27bff1d98ff1b1fc070d464a9944fa0 255 Gene3D G3DSA:3.40.225.10 7 255 2.1E-68 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Patl_1127 485415ba2f578276650221ae9a754491 711 SUPERFAMILY SSF63380 342 445 2.21E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Patl_1127 485415ba2f578276650221ae9a754491 711 Pfam PF00175 Oxidoreductase NAD-binding domain 456 584 2.6E-6 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Patl_1127 485415ba2f578276650221ae9a754491 711 Gene3D G3DSA:2.30.110.10 174 307 1.1E-7 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Patl_1127 485415ba2f578276650221ae9a754491 711 SUPERFAMILY SSF54292 595 703 1.09E-18 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Patl_1127 485415ba2f578276650221ae9a754491 711 Pfam PF00970 Oxidoreductase FAD-binding domain 348 444 1.2E-10 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Patl_1127 485415ba2f578276650221ae9a754491 711 Gene3D G3DSA:3.10.20.30 609 710 5.1E-17 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_1127 485415ba2f578276650221ae9a754491 711 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 634 700 3.6E-10 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Patl_1127 485415ba2f578276650221ae9a754491 711 SUPERFAMILY SSF50475 201 302 8.16E-5 T 11-10-2018 Patl_1127 485415ba2f578276650221ae9a754491 711 Gene3D G3DSA:2.40.30.10 342 445 4.3E-30 T 11-10-2018 Patl_1127 485415ba2f578276650221ae9a754491 711 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 661 669 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Patl_1127 485415ba2f578276650221ae9a754491 711 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 214 280 2.3E-6 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Patl_1127 485415ba2f578276650221ae9a754491 711 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 130 8.2E-5 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Patl_1127 485415ba2f578276650221ae9a754491 711 SUPERFAMILY SSF52343 450 607 3.54E-25 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_1127 485415ba2f578276650221ae9a754491 711 Gene3D G3DSA:3.40.50.80 446 608 1.6E-25 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_2390 881efc393c3958f146144f1ea58570ae 346 Gene3D G3DSA:3.20.20.140 4 344 1.1E-93 T 11-10-2018 Patl_2390 881efc393c3958f146144f1ea58570ae 346 Pfam PF00962 Adenosine/AMP deaminase 15 328 1.9E-56 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 Patl_2390 881efc393c3958f146144f1ea58570ae 346 SUPERFAMILY SSF51556 10 325 1.32E-77 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_2390 881efc393c3958f146144f1ea58570ae 346 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 16 332 1.0E-105 T 11-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 Patl_2390 881efc393c3958f146144f1ea58570ae 346 Hamap MF_01962 Adenine deaminase. 11 323 64.946 T 11-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Patl_2604 b5653f400adb1cb3250023eb12be05c3 706 Gene3D G3DSA:2.40.170.20 164 706 1.9E-58 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_2604 b5653f400adb1cb3250023eb12be05c3 706 SUPERFAMILY SSF56935 29 706 1.57E-93 T 11-10-2018 Patl_2604 b5653f400adb1cb3250023eb12be05c3 706 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 153 1.4E-19 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_2604 b5653f400adb1cb3250023eb12be05c3 706 Gene3D G3DSA:2.170.130.10 42 162 2.0E-30 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_2604 b5653f400adb1cb3250023eb12be05c3 706 Pfam PF00593 TonB dependent receptor 195 705 2.7E-39 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1402 57f4af0d2f389ce4af04792ce34126df 127 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Patl_1402 57f4af0d2f389ce4af04792ce34126df 127 SUPERFAMILY SSF54593 1 126 6.04E-35 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_1402 57f4af0d2f389ce4af04792ce34126df 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 4.1E-20 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Patl_1402 57f4af0d2f389ce4af04792ce34126df 127 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 126 5.2E-61 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Patl_1402 57f4af0d2f389ce4af04792ce34126df 127 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 Patl_1402 57f4af0d2f389ce4af04792ce34126df 127 Gene3D G3DSA:3.10.180.10 1 127 1.3E-46 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_3524 d261e2a93123d2e5ede1c6ca7c5568e8 530 Pfam PF02875 Mur ligase family, glutamate ligase domain 373 458 1.3E-22 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Patl_3524 d261e2a93123d2e5ede1c6ca7c5568e8 530 SUPERFAMILY SSF63418 36 127 6.02E-20 T 11-10-2018 IPR035911 MurE/MurF, N-terminal Patl_3524 d261e2a93123d2e5ede1c6ca7c5568e8 530 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 43 525 1.6E-152 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Patl_3524 d261e2a93123d2e5ede1c6ca7c5568e8 530 Gene3D G3DSA:3.90.190.20 376 528 6.8E-55 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Patl_3524 d261e2a93123d2e5ede1c6ca7c5568e8 530 Gene3D G3DSA:3.40.1390.10 26 127 2.6E-24 T 11-10-2018 Patl_3524 d261e2a93123d2e5ede1c6ca7c5568e8 530 SUPERFAMILY SSF53244 373 526 4.58E-48 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Patl_3524 d261e2a93123d2e5ede1c6ca7c5568e8 530 Gene3D G3DSA:3.40.1190.10 129 375 1.1E-72 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Patl_3524 d261e2a93123d2e5ede1c6ca7c5568e8 530 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 28 525 32.77 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Patl_3524 d261e2a93123d2e5ede1c6ca7c5568e8 530 SUPERFAMILY SSF53623 129 367 4.19E-65 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Patl_3524 d261e2a93123d2e5ede1c6ca7c5568e8 530 Pfam PF08245 Mur ligase middle domain 138 351 6.0E-48 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Patl_3524 d261e2a93123d2e5ede1c6ca7c5568e8 530 Pfam PF01225 Mur ligase family, catalytic domain 45 126 1.2E-10 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Patl_2936 c46ea42ab4e7db6a6c24f5d1d56aa2cf 281 Gene3D G3DSA:1.10.3210.10 2 269 6.2E-61 T 11-10-2018 Patl_2936 c46ea42ab4e7db6a6c24f5d1d56aa2cf 281 SUPERFAMILY SSF109604 9 260 5.93E-56 T 11-10-2018 Patl_2936 c46ea42ab4e7db6a6c24f5d1d56aa2cf 281 Pfam PF08668 HDOD domain 15 205 1.3E-51 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Patl_1930 ffc0f7e38589616c2a6a0e1733e9adec 89 SMART SM00360 2 75 6.4E-21 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 Patl_1930 ffc0f7e38589616c2a6a0e1733e9adec 89 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 1.6E-20 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 Patl_1930 ffc0f7e38589616c2a6a0e1733e9adec 89 Gene3D G3DSA:3.30.70.330 1 89 1.9E-23 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Patl_1930 ffc0f7e38589616c2a6a0e1733e9adec 89 SUPERFAMILY SSF54928 2 81 8.06E-24 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 Patl_4171 9c50554a01d98ee34a4d427e7dfad8ed 470 Pfam PF00877 NlpC/P60 family 331 414 7.9E-12 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Patl_4171 9c50554a01d98ee34a4d427e7dfad8ed 470 Pfam PF12914 SH3 domain of SH3b2 type 221 269 1.5E-9 T 11-10-2018 IPR026864 SH3b2-type SH3 domain Patl_4171 9c50554a01d98ee34a4d427e7dfad8ed 470 SUPERFAMILY SSF54001 310 424 3.92E-18 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Patl_4171 9c50554a01d98ee34a4d427e7dfad8ed 470 Pfam PF12913 SH3 domain (SH3b1 type) 168 210 2.8E-12 T 11-10-2018 IPR039439 SH3b1 domain Patl_4171 9c50554a01d98ee34a4d427e7dfad8ed 470 PIRSF PIRSF019015 1 470 3.0E-126 T 11-10-2018 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type Patl_4171 9c50554a01d98ee34a4d427e7dfad8ed 470 Gene3D G3DSA:3.90.1720.10 303 468 4.4E-34 T 11-10-2018 Patl_0741 3e9ea878926d0816dfc825d6edcf4293 162 Gene3D G3DSA:3.40.30.10 44 161 3.1E-12 T 11-10-2018 Patl_0741 3e9ea878926d0816dfc825d6edcf4293 162 Pfam PF14595 Thioredoxin 46 148 1.3E-6 T 11-10-2018 Patl_0741 3e9ea878926d0816dfc825d6edcf4293 162 SUPERFAMILY SSF52833 58 157 1.12E-13 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_3048 90368bd17d803ed5fc42e4b54a21cbbb 113 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 42 58 4.8E-12 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Patl_3048 90368bd17d803ed5fc42e4b54a21cbbb 113 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 77 93 4.8E-12 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Patl_3048 90368bd17d803ed5fc42e4b54a21cbbb 113 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 98 111 4.8E-12 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Patl_3048 90368bd17d803ed5fc42e4b54a21cbbb 113 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 39 112 5.6E-19 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Patl_3048 90368bd17d803ed5fc42e4b54a21cbbb 113 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 113 16.615 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Patl_3048 90368bd17d803ed5fc42e4b54a21cbbb 113 Pfam PF02049 Flagellar hook-basal body complex protein FliE 37 113 3.6E-28 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Patl_1688 a796cf273f5f22aefbba084bcaa897e3 751 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 167 267 2.3E-10 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Patl_1688 a796cf273f5f22aefbba084bcaa897e3 751 Gene3D G3DSA:1.20.140.10 290 436 1.6E-90 T 11-10-2018 Patl_1688 a796cf273f5f22aefbba084bcaa897e3 751 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 430 7.0E-15 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_1688 a796cf273f5f22aefbba084bcaa897e3 751 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 67 162 1.5E-12 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Patl_1688 a796cf273f5f22aefbba084bcaa897e3 751 SUPERFAMILY SSF47203 290 446 2.26E-24 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_1688 a796cf273f5f22aefbba084bcaa897e3 751 Gene3D G3DSA:2.40.110.10 166 289 1.6E-90 T 11-10-2018 Patl_1688 a796cf273f5f22aefbba084bcaa897e3 751 SUPERFAMILY SSF56645 53 285 8.25E-42 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_1688 a796cf273f5f22aefbba084bcaa897e3 751 Gene3D G3DSA:1.10.540.10 53 165 1.6E-90 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Patl_1688 a796cf273f5f22aefbba084bcaa897e3 751 Pfam PF09317 Domain of unknown function (DUF1974) 444 726 1.0E-76 T 11-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 Patl_3735 49d33b10d3c41a267c5ba82305023928 171 Pfam PF00186 Dihydrofolate reductase 3 171 1.7E-58 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 Patl_3735 49d33b10d3c41a267c5ba82305023928 171 PRINTS PR00070 Dihydrofolate reductase signature 29 37 1.4E-15 T 11-10-2018 Patl_3735 49d33b10d3c41a267c5ba82305023928 171 PRINTS PR00070 Dihydrofolate reductase signature 103 117 1.4E-15 T 11-10-2018 Patl_3735 49d33b10d3c41a267c5ba82305023928 171 PRINTS PR00070 Dihydrofolate reductase signature 42 53 1.4E-15 T 11-10-2018 Patl_3735 49d33b10d3c41a267c5ba82305023928 171 PRINTS PR00070 Dihydrofolate reductase signature 15 25 1.4E-15 T 11-10-2018 Patl_3735 49d33b10d3c41a267c5ba82305023928 171 Gene3D G3DSA:3.40.430.10 2 171 2.1E-57 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Patl_3735 49d33b10d3c41a267c5ba82305023928 171 SUPERFAMILY SSF53597 3 171 1.7E-56 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Patl_3735 49d33b10d3c41a267c5ba82305023928 171 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 15 37 - T 11-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 Patl_3735 49d33b10d3c41a267c5ba82305023928 171 PIRSF PIRSF000194 1 171 6.7E-63 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 Patl_0484 8aca8074bf9a086cba2ed295fdbde47e 422 SUPERFAMILY SSF56935 25 422 4.95E-27 T 11-10-2018 Patl_0484 8aca8074bf9a086cba2ed295fdbde47e 422 Gene3D G3DSA:2.40.160.10 113 407 1.9E-7 T 11-10-2018 IPR023614 Porin domain superfamily Patl_2283 8ed0292288845e3bd59850ea015157c7 118 PIRSF PIRSF007028 1 118 8.5E-50 T 11-10-2018 IPR009874 Protein of unknown function DUF1428 Patl_2283 8ed0292288845e3bd59850ea015157c7 118 Gene3D G3DSA:3.30.70.100 1 118 5.1E-47 T 11-10-2018 Patl_2283 8ed0292288845e3bd59850ea015157c7 118 Pfam PF07237 Protein of unknown function (DUF1428) 2 104 1.0E-44 T 11-10-2018 IPR009874 Protein of unknown function DUF1428 Patl_2283 8ed0292288845e3bd59850ea015157c7 118 SUPERFAMILY SSF54909 1 117 6.97E-50 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_1855 97aad29fab775b968fe5379de9dad328 587 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 25 558 1.4E-239 T 11-10-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 Patl_1855 97aad29fab775b968fe5379de9dad328 587 Pfam PF13360 PQQ-like domain 72 223 1.5E-17 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Patl_1855 97aad29fab775b968fe5379de9dad328 587 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 262 283 - T 11-10-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 Patl_1855 97aad29fab775b968fe5379de9dad328 587 Gene3D G3DSA:2.140.10.10 26 587 1.8E-210 T 11-10-2018 Patl_1855 97aad29fab775b968fe5379de9dad328 587 SMART SM00564 287 314 41.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_1855 97aad29fab775b968fe5379de9dad328 587 SMART SM00564 137 169 5.5E-4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_1855 97aad29fab775b968fe5379de9dad328 587 SMART SM00564 499 530 0.032 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_1855 97aad29fab775b968fe5379de9dad328 587 SMART SM00564 183 220 7.6 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_1855 97aad29fab775b968fe5379de9dad328 587 SMART SM00564 89 120 4.0E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_1855 97aad29fab775b968fe5379de9dad328 587 SMART SM00564 447 489 0.086 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat Patl_1855 97aad29fab775b968fe5379de9dad328 587 Pfam PF01011 PQQ enzyme repeat 504 540 3.6E-8 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat Patl_1855 97aad29fab775b968fe5379de9dad328 587 SUPERFAMILY SSF50998 34 581 1.28E-158 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily Patl_2163 f4884fb2a7911d3c90466b9fcc71087a 409 Gene3D G3DSA:3.90.550.10 103 330 2.8E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_2163 f4884fb2a7911d3c90466b9fcc71087a 409 SUPERFAMILY SSF53448 38 404 4.61E-90 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3797 7ead1e550489295312e769b212f49821 540 Gene3D G3DSA:3.30.70.270 102 284 3.6E-38 T 11-10-2018 Patl_3797 7ead1e550489295312e769b212f49821 540 SMART SM00267 96 272 1.5E-30 T 11-10-2018 IPR000160 GGDEF domain Patl_3797 7ead1e550489295312e769b212f49821 540 Pfam PF00563 EAL domain 289 522 1.5E-64 T 11-10-2018 IPR001633 EAL domain Patl_3797 7ead1e550489295312e769b212f49821 540 SUPERFAMILY SSF141868 289 535 3.92E-76 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3797 7ead1e550489295312e769b212f49821 540 SMART SM00052 282 527 4.2E-83 T 11-10-2018 IPR001633 EAL domain Patl_3797 7ead1e550489295312e769b212f49821 540 SUPERFAMILY SSF55073 111 268 2.82E-31 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3797 7ead1e550489295312e769b212f49821 540 Pfam PF00990 Diguanylate cyclase, GGDEF domain 107 266 9.4E-32 T 11-10-2018 IPR000160 GGDEF domain Patl_3797 7ead1e550489295312e769b212f49821 540 Gene3D G3DSA:3.20.20.450 285 538 1.0E-82 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3797 7ead1e550489295312e769b212f49821 540 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 107 267 8.2E-24 T 11-10-2018 IPR000160 GGDEF domain Patl_1796 9cda180eb3a14d29d3bc5b358db78b7b 115 PIRSF PIRSF000169 1 115 2.0E-38 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 Patl_1796 9cda180eb3a14d29d3bc5b358db78b7b 115 Gene3D G3DSA:1.20.1300.10 1 115 1.0E-27 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1796 9cda180eb3a14d29d3bc5b358db78b7b 115 SUPERFAMILY SSF81343 5 115 9.16E-28 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1796 9cda180eb3a14d29d3bc5b358db78b7b 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 2.7E-31 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 Patl_0808 c0f90e49e06aacef567235c05a5f0bd5 566 Gene3D G3DSA:2.60.40.1080 311 399 3.1E-6 T 11-10-2018 Patl_0808 c0f90e49e06aacef567235c05a5f0bd5 566 Gene3D G3DSA:2.60.40.1080 206 292 8.0E-12 T 11-10-2018 Patl_0808 c0f90e49e06aacef567235c05a5f0bd5 566 Pfam PF02368 Bacterial Ig-like domain (group 2) 217 288 2.0E-9 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 Patl_0808 c0f90e49e06aacef567235c05a5f0bd5 566 SMART SM00635 308 395 0.55 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 Patl_0808 c0f90e49e06aacef567235c05a5f0bd5 566 SMART SM00635 211 288 0.15 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 Patl_0808 c0f90e49e06aacef567235c05a5f0bd5 566 SUPERFAMILY SSF49373 214 285 2.39E-8 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Patl_0051 6fb1f9f7ea5573ae236e61fb2ddf5146 270 Pfam PF06827 Zinc finger found in FPG and IleRS 242 270 3.7E-8 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Patl_0051 6fb1f9f7ea5573ae236e61fb2ddf5146 270 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 2.1E-25 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Patl_0051 6fb1f9f7ea5573ae236e61fb2ddf5146 270 SMART SM01232 130 222 4.3E-41 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Patl_0051 6fb1f9f7ea5573ae236e61fb2ddf5146 270 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 9.4E-90 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Patl_0051 6fb1f9f7ea5573ae236e61fb2ddf5146 270 SUPERFAMILY SSF57716 218 270 6.27E-16 T 11-10-2018 Patl_0051 6fb1f9f7ea5573ae236e61fb2ddf5146 270 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 40.697 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Patl_0051 6fb1f9f7ea5573ae236e61fb2ddf5146 270 SUPERFAMILY SSF46946 131 223 1.31E-27 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Patl_0051 6fb1f9f7ea5573ae236e61fb2ddf5146 270 SUPERFAMILY SSF81624 2 139 4.84E-39 T 11-10-2018 IPR035937 MutM-like, N-terminal Patl_0051 6fb1f9f7ea5573ae236e61fb2ddf5146 270 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 4.9E-30 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Patl_0051 6fb1f9f7ea5573ae236e61fb2ddf5146 270 Gene3D G3DSA:1.10.8.50 132 270 2.2E-44 T 11-10-2018 Patl_0051 6fb1f9f7ea5573ae236e61fb2ddf5146 270 Gene3D G3DSA:3.20.190.10 2 124 2.1E-37 T 11-10-2018 IPR035937 MutM-like, N-terminal Patl_0051 6fb1f9f7ea5573ae236e61fb2ddf5146 270 SMART SM00898 2 115 1.1E-50 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Patl_1512 54b1d5a5c0a07bc959f27e0fdca51e26 452 Gene3D G3DSA:3.30.300.30 345 451 3.2E-13 T 11-10-2018 Patl_1512 54b1d5a5c0a07bc959f27e0fdca51e26 452 Pfam PF14535 AMP-binding enzyme C-terminal domain 353 450 2.0E-11 T 11-10-2018 IPR028154 AMP-dependent ligase, C-terminal Patl_1512 54b1d5a5c0a07bc959f27e0fdca51e26 452 Gene3D G3DSA:3.40.50.12780 7 344 1.2E-71 T 11-10-2018 Patl_1512 54b1d5a5c0a07bc959f27e0fdca51e26 452 SUPERFAMILY SSF56801 57 399 3.66E-21 T 11-10-2018 Patl_3421 7fed6f4249ded64bd1032039c1fc5a8a 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 40 67 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Patl_3421 7fed6f4249ded64bd1032039c1fc5a8a 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 9 260 6.6E-89 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Patl_3421 7fed6f4249ded64bd1032039c1fc5a8a 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 8 260 2.4E-78 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Patl_3421 7fed6f4249ded64bd1032039c1fc5a8a 268 Gene3D G3DSA:1.10.8.100 199 264 3.2E-22 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Patl_3421 7fed6f4249ded64bd1032039c1fc5a8a 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 8 263 55.907 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Patl_3421 7fed6f4249ded64bd1032039c1fc5a8a 268 Gene3D G3DSA:3.40.50.150 2 198 7.3E-67 T 11-10-2018 Patl_3421 7fed6f4249ded64bd1032039c1fc5a8a 268 SUPERFAMILY SSF53335 7 262 2.73E-77 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3421 7fed6f4249ded64bd1032039c1fc5a8a 268 SMART SM00650 24 196 1.3E-83 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Patl_0615 021baf773b6b53ee81cef9d7479e3878 325 Pfam PF00990 Diguanylate cyclase, GGDEF domain 166 318 4.7E-35 T 11-10-2018 IPR000160 GGDEF domain Patl_0615 021baf773b6b53ee81cef9d7479e3878 325 Gene3D G3DSA:3.30.70.270 151 323 5.2E-45 T 11-10-2018 Patl_0615 021baf773b6b53ee81cef9d7479e3878 325 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 161 320 1.6E-39 T 11-10-2018 IPR000160 GGDEF domain Patl_0615 021baf773b6b53ee81cef9d7479e3878 325 SMART SM00267 154 323 1.5E-47 T 11-10-2018 IPR000160 GGDEF domain Patl_0615 021baf773b6b53ee81cef9d7479e3878 325 SUPERFAMILY SSF55073 170 322 3.69E-36 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_0839 8eadc9207eb7645b61d3c6d5c24fa073 983 Gene3D G3DSA:3.20.20.80 50 399 2.1E-171 T 11-10-2018 Patl_0839 8eadc9207eb7645b61d3c6d5c24fa073 983 Gene3D G3DSA:2.60.40.1080 709 793 1.3E-16 T 11-10-2018 Patl_0839 8eadc9207eb7645b61d3c6d5c24fa073 983 Pfam PF02368 Bacterial Ig-like domain (group 2) 712 787 1.4E-9 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 Patl_0839 8eadc9207eb7645b61d3c6d5c24fa073 983 SUPERFAMILY SSF49373 710 788 1.18E-11 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Patl_0839 8eadc9207eb7645b61d3c6d5c24fa073 983 SUPERFAMILY SSF51445 148 312 8.29E-11 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_0839 8eadc9207eb7645b61d3c6d5c24fa073 983 SMART SM00635 712 788 3.0E-7 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 Patl_0839 8eadc9207eb7645b61d3c6d5c24fa073 983 Gene3D G3DSA:2.60.120.1200 595 706 4.0E-35 T 11-10-2018 Patl_0839 8eadc9207eb7645b61d3c6d5c24fa073 983 Gene3D G3DSA:2.60.40.1180 35 487 2.1E-171 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_2792 0875354543da99519b6b94a0264644de 641 Pfam PF13632 Glycosyl transferase family group 2 199 402 1.5E-14 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Patl_2792 0875354543da99519b6b94a0264644de 641 SUPERFAMILY SSF53448 100 383 3.3E-22 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_2792 0875354543da99519b6b94a0264644de 641 Gene3D G3DSA:3.90.550.10 98 327 8.2E-15 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_0707 a2bf3885495e918b08473137b99a3e1f 97 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 13 89 3.0E-40 T 11-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 Patl_0707 a2bf3885495e918b08473137b99a3e1f 97 Pfam PF10963 Phage tail assembly chaperone 10 90 1.3E-28 T 11-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 Patl_4032 bb1d0b13396260e3ae66d5ecac1bdc94 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 186 207 7.9E-37 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Patl_4032 bb1d0b13396260e3ae66d5ecac1bdc94 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 155 173 7.9E-37 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Patl_4032 bb1d0b13396260e3ae66d5ecac1bdc94 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 58 78 7.9E-37 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Patl_4032 bb1d0b13396260e3ae66d5ecac1bdc94 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 229 243 7.9E-37 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Patl_4032 bb1d0b13396260e3ae66d5ecac1bdc94 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 96 125 7.9E-37 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Patl_4032 bb1d0b13396260e3ae66d5ecac1bdc94 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 35 57 7.9E-37 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 Patl_4032 bb1d0b13396260e3ae66d5ecac1bdc94 375 PIRSF PIRSF000345 5 314 7.7E-100 T 11-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 Patl_4032 bb1d0b13396260e3ae66d5ecac1bdc94 375 Pfam PF00487 Fatty acid desaturase 41 261 7.8E-24 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 Patl_4234 6e1a33c40f98cac0024b5aad437a6a48 447 TIGRFAM TIGR00797 matE: MATE efflux family protein 27 418 4.8E-76 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Patl_4234 6e1a33c40f98cac0024b5aad437a6a48 447 Pfam PF01554 MatE 27 187 3.4E-22 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Patl_4234 6e1a33c40f98cac0024b5aad437a6a48 447 Pfam PF01554 MatE 250 398 5.5E-12 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Patl_1722 aaeea5a57bee3251ad1661ec14221e2a 170 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 142 162 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 Patl_1722 aaeea5a57bee3251ad1661ec14221e2a 170 Gene3D G3DSA:3.30.1330.40 21 168 2.8E-22 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Patl_1722 aaeea5a57bee3251ad1661ec14221e2a 170 SUPERFAMILY SSF55298 36 169 8.64E-20 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Patl_1722 aaeea5a57bee3251ad1661ec14221e2a 170 Pfam PF01042 Endoribonuclease L-PSP 48 166 5.8E-12 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Patl_0568 66bacec5d1262af72a61b2f86ddb0f4b 497 Pfam PF04963 Sigma-54 factor, core binding domain 135 323 2.6E-57 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 Patl_0568 66bacec5d1262af72a61b2f86ddb0f4b 497 PRINTS PR00045 Sigma-54 factor signature 412 423 6.3E-29 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Patl_0568 66bacec5d1262af72a61b2f86ddb0f4b 497 PRINTS PR00045 Sigma-54 factor signature 396 408 6.3E-29 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Patl_0568 66bacec5d1262af72a61b2f86ddb0f4b 497 PRINTS PR00045 Sigma-54 factor signature 470 488 6.3E-29 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Patl_0568 66bacec5d1262af72a61b2f86ddb0f4b 497 PRINTS PR00045 Sigma-54 factor signature 206 223 6.3E-29 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Patl_0568 66bacec5d1262af72a61b2f86ddb0f4b 497 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 475 482 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Patl_0568 66bacec5d1262af72a61b2f86ddb0f4b 497 Gene3D G3DSA:1.10.10.60 437 494 4.2E-23 T 11-10-2018 Patl_0568 66bacec5d1262af72a61b2f86ddb0f4b 497 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 384 403 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Patl_0568 66bacec5d1262af72a61b2f86ddb0f4b 497 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 494 7.2E-154 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Patl_0568 66bacec5d1262af72a61b2f86ddb0f4b 497 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 6.5E-17 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Patl_0568 66bacec5d1262af72a61b2f86ddb0f4b 497 Gene3D G3DSA:1.10.10.1330 137 270 3.3E-21 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily Patl_0568 66bacec5d1262af72a61b2f86ddb0f4b 497 Pfam PF04552 Sigma-54, DNA binding domain 337 494 2.4E-70 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding Patl_0568 66bacec5d1262af72a61b2f86ddb0f4b 497 PIRSF PIRSF000774 1 497 8.7E-149 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Patl_0937 b064a18854b02c89ed5342c606d54e5f 206 SUPERFAMILY SSF88659 121 181 1.37E-9 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_0937 b064a18854b02c89ed5342c606d54e5f 206 Gene3D G3DSA:1.10.1740.10 18 104 3.3E-5 T 11-10-2018 Patl_0937 b064a18854b02c89ed5342c606d54e5f 206 Gene3D G3DSA:1.10.10.10 105 186 1.0E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0937 b064a18854b02c89ed5342c606d54e5f 206 Pfam PF04542 Sigma-70 region 2 31 88 2.4E-7 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Patl_0937 b064a18854b02c89ed5342c606d54e5f 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 179 9.7E-17 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Patl_0937 b064a18854b02c89ed5342c606d54e5f 206 Pfam PF08281 Sigma-70, region 4 128 178 2.4E-8 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_0937 b064a18854b02c89ed5342c606d54e5f 206 SUPERFAMILY SSF88946 28 105 8.63E-8 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Patl_2167 ebeb232391798a453e5bdd3c8290bef9 327 Pfam PF00107 Zinc-binding dehydrogenase 155 275 1.4E-24 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_2167 ebeb232391798a453e5bdd3c8290bef9 327 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 325 4.3E-116 T 11-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 Patl_2167 ebeb232391798a453e5bdd3c8290bef9 327 Gene3D G3DSA:3.90.180.10 14 324 1.2E-98 T 11-10-2018 Patl_2167 ebeb232391798a453e5bdd3c8290bef9 327 SUPERFAMILY SSF51735 115 284 1.97E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2167 ebeb232391798a453e5bdd3c8290bef9 327 SUPERFAMILY SSF50129 1 144 1.1E-32 T 11-10-2018 IPR011032 GroES-like superfamily Patl_2167 ebeb232391798a453e5bdd3c8290bef9 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 137 1.2E-7 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_2167 ebeb232391798a453e5bdd3c8290bef9 327 SMART SM00829 10 324 1.9E-41 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_2167 ebeb232391798a453e5bdd3c8290bef9 327 Gene3D G3DSA:3.40.50.720 124 263 1.2E-98 T 11-10-2018 Patl_3679 0c2967f0de161524b85749d8aafec9c5 165 Gene3D G3DSA:3.10.20.30 1 73 9.5E-26 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_3679 0c2967f0de161524b85749d8aafec9c5 165 Pfam PF01799 [2Fe-2S] binding domain 72 141 2.1E-27 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Patl_3679 0c2967f0de161524b85749d8aafec9c5 165 SUPERFAMILY SSF54292 2 77 1.57E-23 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Patl_3679 0c2967f0de161524b85749d8aafec9c5 165 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 52 1.8E-5 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Patl_3679 0c2967f0de161524b85749d8aafec9c5 165 Gene3D G3DSA:1.10.150.120 74 164 1.8E-26 T 11-10-2018 Patl_3679 0c2967f0de161524b85749d8aafec9c5 165 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Patl_3679 0c2967f0de161524b85749d8aafec9c5 165 SUPERFAMILY SSF47741 72 151 1.3E-31 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Patl_4160 265129d5842f27fb26b794ddd5376bac 818 SMART SM00644 32 191 2.9E-18 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Patl_4160 265129d5842f27fb26b794ddd5376bac 818 SUPERFAMILY SSF47090 207 288 8.04E-20 T 11-10-2018 IPR036365 PGBD-like superfamily Patl_4160 265129d5842f27fb26b794ddd5376bac 818 Pfam PF01471 Putative peptidoglycan binding domain 225 278 5.1E-8 T 11-10-2018 IPR002477 Peptidoglycan binding-like Patl_4160 265129d5842f27fb26b794ddd5376bac 818 SUPERFAMILY SSF56601 423 781 9.16E-73 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Patl_4160 265129d5842f27fb26b794ddd5376bac 818 Gene3D G3DSA:3.40.80.10 39 205 6.1E-44 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Patl_4160 265129d5842f27fb26b794ddd5376bac 818 SUPERFAMILY SSF55846 33 207 1.73E-40 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Patl_4160 265129d5842f27fb26b794ddd5376bac 818 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 40 192 5.6E-21 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Patl_4160 265129d5842f27fb26b794ddd5376bac 818 Gene3D G3DSA:3.40.710.10 415 792 2.5E-79 T 11-10-2018 Patl_4160 265129d5842f27fb26b794ddd5376bac 818 Pfam PF00144 Beta-lactamase 429 783 2.1E-60 T 11-10-2018 IPR001466 Beta-lactamase-related Patl_4160 265129d5842f27fb26b794ddd5376bac 818 Gene3D G3DSA:1.10.101.10 206 287 1.1E-23 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Patl_2331 ca2ff969a7476d93adef770228d852bd 307 SUPERFAMILY SSF53850 92 297 2.31E-38 T 11-10-2018 Patl_2331 ca2ff969a7476d93adef770228d852bd 307 SUPERFAMILY SSF46785 4 89 9.99E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2331 ca2ff969a7476d93adef770228d852bd 307 Gene3D G3DSA:1.10.10.10 1 90 5.4E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2331 ca2ff969a7476d93adef770228d852bd 307 Pfam PF03466 LysR substrate binding domain 98 296 1.9E-19 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_2331 ca2ff969a7476d93adef770228d852bd 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 3.5E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2331 ca2ff969a7476d93adef770228d852bd 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2331 ca2ff969a7476d93adef770228d852bd 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2331 ca2ff969a7476d93adef770228d852bd 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.9E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_2331 ca2ff969a7476d93adef770228d852bd 307 Gene3D G3DSA:3.40.190.10 173 270 1.4E-49 T 11-10-2018 Patl_2331 ca2ff969a7476d93adef770228d852bd 307 Gene3D G3DSA:3.40.190.10 98 293 1.4E-49 T 11-10-2018 Patl_4114 edb40387935d5ca4095a24cc5254fc6b 681 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 258 421 1.3E-40 T 11-10-2018 IPR000160 GGDEF domain Patl_4114 edb40387935d5ca4095a24cc5254fc6b 681 Gene3D G3DSA:3.30.70.270 256 434 4.0E-53 T 11-10-2018 Patl_4114 edb40387935d5ca4095a24cc5254fc6b 681 Pfam PF00563 EAL domain 439 672 1.6E-68 T 11-10-2018 IPR001633 EAL domain Patl_4114 edb40387935d5ca4095a24cc5254fc6b 681 SMART SM00267 250 422 3.6E-57 T 11-10-2018 IPR000160 GGDEF domain Patl_4114 edb40387935d5ca4095a24cc5254fc6b 681 SMART SM00304 188 241 8.8E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_4114 edb40387935d5ca4095a24cc5254fc6b 681 Gene3D G3DSA:3.20.20.450 435 680 2.3E-86 T 11-10-2018 IPR035919 EAL domain superfamily Patl_4114 edb40387935d5ca4095a24cc5254fc6b 681 SUPERFAMILY SSF158472 188 236 9.81E-5 T 11-10-2018 Patl_4114 edb40387935d5ca4095a24cc5254fc6b 681 SMART SM00052 432 677 3.0E-95 T 11-10-2018 IPR001633 EAL domain Patl_4114 edb40387935d5ca4095a24cc5254fc6b 681 SUPERFAMILY SSF141868 438 678 7.59E-80 T 11-10-2018 IPR035919 EAL domain superfamily Patl_4114 edb40387935d5ca4095a24cc5254fc6b 681 SUPERFAMILY SSF55073 266 422 1.02E-44 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_4114 edb40387935d5ca4095a24cc5254fc6b 681 Pfam PF00990 Diguanylate cyclase, GGDEF domain 261 417 5.9E-45 T 11-10-2018 IPR000160 GGDEF domain Patl_4145 f6b7f07da0dc98e96e9db88d532df3c8 413 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 412 39.314 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Patl_4145 f6b7f07da0dc98e96e9db88d532df3c8 413 SUPERFAMILY SSF53720 2 412 3.14E-110 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_4145 f6b7f07da0dc98e96e9db88d532df3c8 413 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 402 1.3E-138 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Patl_4145 f6b7f07da0dc98e96e9db88d532df3c8 413 Gene3D G3DSA:3.40.309.10 222 370 7.9E-152 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Patl_4145 f6b7f07da0dc98e96e9db88d532df3c8 413 Pfam PF00171 Aldehyde dehydrogenase family 3 281 2.9E-17 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Patl_4145 f6b7f07da0dc98e96e9db88d532df3c8 413 Gene3D G3DSA:3.40.605.10 14 407 7.9E-152 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_4145 f6b7f07da0dc98e96e9db88d532df3c8 413 PIRSF PIRSF000151 1 413 3.6E-165 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Patl_0659 7f99bf54478e358c52ee8bb12ab1d387 228 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Patl_0659 7f99bf54478e358c52ee8bb12ab1d387 228 SUPERFAMILY SSF51366 4 218 6.8E-70 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Patl_0659 7f99bf54478e358c52ee8bb12ab1d387 228 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 7.2E-85 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Patl_0659 7f99bf54478e358c52ee8bb12ab1d387 228 PIRSF PIRSF001461 1 228 4.5E-100 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Patl_0659 7f99bf54478e358c52ee8bb12ab1d387 228 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 2.3E-93 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Patl_0659 7f99bf54478e358c52ee8bb12ab1d387 228 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Patl_0659 7f99bf54478e358c52ee8bb12ab1d387 228 Gene3D G3DSA:3.20.20.70 5 221 5.9E-79 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_0665 53791630f2a8f4dd4dac0062342bdc92 355 SUPERFAMILY SSF56796 3 354 2.88E-114 T 11-10-2018 Patl_0665 53791630f2a8f4dd4dac0062342bdc92 355 PIRSF PIRSF001455 4 353 5.1E-110 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Patl_0665 53791630f2a8f4dd4dac0062342bdc92 355 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 349 5.2E-119 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Patl_0665 53791630f2a8f4dd4dac0062342bdc92 355 Gene3D G3DSA:1.20.1090.10 171 355 1.6E-66 T 11-10-2018 Patl_0665 53791630f2a8f4dd4dac0062342bdc92 355 Pfam PF01761 3-dehydroquinate synthase 65 323 5.1E-110 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Patl_0665 53791630f2a8f4dd4dac0062342bdc92 355 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 71.087 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Patl_0665 53791630f2a8f4dd4dac0062342bdc92 355 Gene3D G3DSA:3.40.50.1970 1 170 1.6E-63 T 11-10-2018 Patl_2191 6ff3c338a972ebb8ad470a0550988e87 121 Gene3D G3DSA:3.40.30.10 8 120 3.8E-40 T 11-10-2018 Patl_2191 6ff3c338a972ebb8ad470a0550988e87 121 Pfam PF03960 ArsC family 12 119 2.0E-18 T 11-10-2018 IPR006660 Arsenate reductase-like Patl_2191 6ff3c338a972ebb8ad470a0550988e87 121 SUPERFAMILY SSF52833 8 120 1.92E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_2191 6ff3c338a972ebb8ad470a0550988e87 121 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 10 119 3.9E-31 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR Patl_3433 243928d4f7a1b26b315989f5f7a543d6 188 Gene3D G3DSA:3.90.45.10 1 171 8.0E-51 T 11-10-2018 IPR036821 Peptide deformylase superfamily Patl_3433 243928d4f7a1b26b315989f5f7a543d6 188 Pfam PF01327 Polypeptide deformylase 1 158 1.1E-44 T 11-10-2018 IPR023635 Peptide deformylase Patl_3433 243928d4f7a1b26b315989f5f7a543d6 188 SUPERFAMILY SSF56420 1 166 3.66E-47 T 11-10-2018 IPR036821 Peptide deformylase superfamily Patl_3433 243928d4f7a1b26b315989f5f7a543d6 188 Hamap MF_00163 Peptide deformylase [def]. 1 170 22.446 T 11-10-2018 IPR023635 Peptide deformylase Patl_3433 243928d4f7a1b26b315989f5f7a543d6 188 PIRSF PIRSF004749 1 187 2.3E-43 T 11-10-2018 IPR023635 Peptide deformylase Patl_3433 243928d4f7a1b26b315989f5f7a543d6 188 PRINTS PR01576 Peptide deformylase signature 98 109 1.1E-22 T 11-10-2018 IPR023635 Peptide deformylase Patl_3433 243928d4f7a1b26b315989f5f7a543d6 188 PRINTS PR01576 Peptide deformylase signature 110 128 1.1E-22 T 11-10-2018 IPR023635 Peptide deformylase Patl_3433 243928d4f7a1b26b315989f5f7a543d6 188 PRINTS PR01576 Peptide deformylase signature 129 158 1.1E-22 T 11-10-2018 IPR023635 Peptide deformylase Patl_3433 243928d4f7a1b26b315989f5f7a543d6 188 PRINTS PR01576 Peptide deformylase signature 34 63 1.1E-22 T 11-10-2018 IPR023635 Peptide deformylase Patl_3433 243928d4f7a1b26b315989f5f7a543d6 188 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 2 158 3.1E-34 T 11-10-2018 IPR023635 Peptide deformylase Patl_2716 6dd0620ad966431dab7ad8f885f49e0a 172 SUPERFAMILY SSF54637 13 163 4.15E-47 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_2716 6dd0620ad966431dab7ad8f885f49e0a 172 Pfam PF01575 MaoC like domain 25 139 6.3E-21 T 11-10-2018 IPR002539 MaoC-like dehydratase domain Patl_2716 6dd0620ad966431dab7ad8f885f49e0a 172 Gene3D G3DSA:3.10.129.10 10 162 1.3E-50 T 11-10-2018 Patl_2393 d5c3d1e6113e51e3bd2e2ebdb0f26ad2 525 Gene3D G3DSA:2.40.30.170 236 332 5.1E-25 T 11-10-2018 Patl_2393 d5c3d1e6113e51e3bd2e2ebdb0f26ad2 525 SUPERFAMILY SSF111369 134 331 4.84E-19 T 11-10-2018 Patl_2393 d5c3d1e6113e51e3bd2e2ebdb0f26ad2 525 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 180 406 2.4E-36 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Patl_2393 d5c3d1e6113e51e3bd2e2ebdb0f26ad2 525 Gene3D G3DSA:1.10.287.470 170 196 1.4E-7 T 11-10-2018 Patl_2393 d5c3d1e6113e51e3bd2e2ebdb0f26ad2 525 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 118 326 3.2E-78 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Patl_2393 d5c3d1e6113e51e3bd2e2ebdb0f26ad2 525 Gene3D G3DSA:2.40.50.100 135 169 1.4E-7 T 11-10-2018 Patl_2393 d5c3d1e6113e51e3bd2e2ebdb0f26ad2 525 Gene3D G3DSA:2.40.50.320 444 520 1.4E-8 T 11-10-2018 Patl_2393 d5c3d1e6113e51e3bd2e2ebdb0f26ad2 525 Gene3D G3DSA:2.40.420.20 333 426 6.7E-24 T 11-10-2018 Patl_2393 d5c3d1e6113e51e3bd2e2ebdb0f26ad2 525 Gene3D G3DSA:2.40.30.170 121 134 1.4E-7 T 11-10-2018 Patl_2393 d5c3d1e6113e51e3bd2e2ebdb0f26ad2 525 Pfam PF11604 Copper binding periplasmic protein CusF 450 517 1.5E-16 T 11-10-2018 IPR021647 Copper binding periplasmic protein CusF Patl_1709 f4b897d34a765cd8510d69036046714c 618 Gene3D G3DSA:3.40.50.300 13 196 6.5E-34 T 11-10-2018 Patl_1709 f4b897d34a765cd8510d69036046714c 618 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 17 37 2.6E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_1709 f4b897d34a765cd8510d69036046714c 618 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 38 56 2.6E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_1709 f4b897d34a765cd8510d69036046714c 618 Pfam PF02421 Ferrous iron transport protein B 16 171 8.5E-42 T 11-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 Patl_1709 f4b897d34a765cd8510d69036046714c 618 Pfam PF07664 Ferrous iron transport protein B C terminus 407 459 1.0E-13 T 11-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 Patl_1709 f4b897d34a765cd8510d69036046714c 618 Pfam PF07670 Nucleoside recognition 293 383 8.8E-11 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Patl_1709 f4b897d34a765cd8510d69036046714c 618 Pfam PF07670 Nucleoside recognition 466 593 1.7E-24 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Patl_1709 f4b897d34a765cd8510d69036046714c 618 SUPERFAMILY SSF52540 16 187 6.84E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1280 f77cfc638f3a17c68615ae92d1d4fbcc 454 Hamap MF_01498 DNA repair protein RadA [radA]. 21 452 41.705 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Patl_1280 f77cfc638f3a17c68615ae92d1d4fbcc 454 Gene3D G3DSA:3.30.230.10 309 454 3.6E-15 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Patl_1280 f77cfc638f3a17c68615ae92d1d4fbcc 454 Pfam PF13541 Subunit ChlI of Mg-chelatase 346 430 1.0E-8 T 11-10-2018 Patl_1280 f77cfc638f3a17c68615ae92d1d4fbcc 454 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 451 1.1E-216 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Patl_1280 f77cfc638f3a17c68615ae92d1d4fbcc 454 Pfam PF13481 AAA domain 78 222 3.6E-11 T 11-10-2018 Patl_1280 f77cfc638f3a17c68615ae92d1d4fbcc 454 PRINTS PR01874 DNA repair protein radA signature 10 34 3.4E-93 T 11-10-2018 Patl_1280 f77cfc638f3a17c68615ae92d1d4fbcc 454 PRINTS PR01874 DNA repair protein radA signature 83 111 3.4E-93 T 11-10-2018 Patl_1280 f77cfc638f3a17c68615ae92d1d4fbcc 454 PRINTS PR01874 DNA repair protein radA signature 213 241 3.4E-93 T 11-10-2018 Patl_1280 f77cfc638f3a17c68615ae92d1d4fbcc 454 PRINTS PR01874 DNA repair protein radA signature 174 198 3.4E-93 T 11-10-2018 Patl_1280 f77cfc638f3a17c68615ae92d1d4fbcc 454 PRINTS PR01874 DNA repair protein radA signature 248 274 3.4E-93 T 11-10-2018 Patl_1280 f77cfc638f3a17c68615ae92d1d4fbcc 454 PRINTS PR01874 DNA repair protein radA signature 322 345 3.4E-93 T 11-10-2018 Patl_1280 f77cfc638f3a17c68615ae92d1d4fbcc 454 PRINTS PR01874 DNA repair protein radA signature 124 141 3.4E-93 T 11-10-2018 Patl_1280 f77cfc638f3a17c68615ae92d1d4fbcc 454 Gene3D G3DSA:3.40.50.300 66 279 2.5E-38 T 11-10-2018 Patl_1280 f77cfc638f3a17c68615ae92d1d4fbcc 454 SUPERFAMILY SSF54211 255 454 3.49E-40 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_1280 f77cfc638f3a17c68615ae92d1d4fbcc 454 SMART SM00382 91 244 2.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1280 f77cfc638f3a17c68615ae92d1d4fbcc 454 SUPERFAMILY SSF52540 70 289 3.94E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4028 6be5fc7aa4b85c39200fe0981efa95b3 212 SUPERFAMILY SSF46894 142 210 1.05E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_4028 6be5fc7aa4b85c39200fe0981efa95b3 212 SMART SM00421 148 205 3.4E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_4028 6be5fc7aa4b85c39200fe0981efa95b3 212 SUPERFAMILY SSF52172 2 129 3.42E-20 T 11-10-2018 IPR011006 CheY-like superfamily Patl_4028 6be5fc7aa4b85c39200fe0981efa95b3 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 1.6E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_4028 6be5fc7aa4b85c39200fe0981efa95b3 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 1.6E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_4028 6be5fc7aa4b85c39200fe0981efa95b3 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 1.6E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_4028 6be5fc7aa4b85c39200fe0981efa95b3 212 SMART SM00448 2 116 2.1E-9 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4028 6be5fc7aa4b85c39200fe0981efa95b3 212 Gene3D G3DSA:3.40.50.12740 3 210 6.2E-45 T 11-10-2018 Patl_4028 6be5fc7aa4b85c39200fe0981efa95b3 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 6.4E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_4028 6be5fc7aa4b85c39200fe0981efa95b3 212 Pfam PF00072 Response regulator receiver domain 5 108 1.7E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4028 6be5fc7aa4b85c39200fe0981efa95b3 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_4225 7812c2f5fbcc2eeffd072eb9e73f1e82 380 Gene3D G3DSA:3.40.50.20 1 95 1.4E-16 T 11-10-2018 Patl_4225 7812c2f5fbcc2eeffd072eb9e73f1e82 380 Gene3D G3DSA:3.30.1490.20 107 175 4.6E-90 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Patl_4225 7812c2f5fbcc2eeffd072eb9e73f1e82 380 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 350 8.1E-105 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Patl_4225 7812c2f5fbcc2eeffd072eb9e73f1e82 380 SUPERFAMILY SSF52440 2 88 5.18E-15 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Patl_4225 7812c2f5fbcc2eeffd072eb9e73f1e82 380 SUPERFAMILY SSF51246 299 370 1.18E-16 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Patl_4225 7812c2f5fbcc2eeffd072eb9e73f1e82 380 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 347 36.049 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Patl_4225 7812c2f5fbcc2eeffd072eb9e73f1e82 380 Pfam PF02222 ATP-grasp domain 101 275 6.4E-51 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Patl_4225 7812c2f5fbcc2eeffd072eb9e73f1e82 380 SUPERFAMILY SSF56059 92 296 1.24E-56 T 11-10-2018 Patl_4225 7812c2f5fbcc2eeffd072eb9e73f1e82 380 Gene3D G3DSA:3.30.470.20 96 344 4.6E-90 T 11-10-2018 Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 Pfam PF01627 Hpt domain 689 759 2.0E-11 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 Gene3D G3DSA:3.30.450.20 158 267 5.8E-22 T 11-10-2018 Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 Gene3D G3DSA:3.40.50.2300 516 644 2.3E-30 T 11-10-2018 Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 SUPERFAMILY SSF55785 143 270 2.44E-24 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 Pfam PF00512 His Kinase A (phospho-acceptor) domain 286 348 8.7E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 Gene3D G3DSA:1.10.287.130 268 348 2.3E-19 T 11-10-2018 Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 398 512 4.0E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 SUPERFAMILY SSF47226 665 776 2.88E-24 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 SUPERFAMILY SSF55874 339 513 1.83E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 Pfam PF00072 Response regulator receiver domain 530 639 1.3E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 Gene3D G3DSA:1.20.120.160 657 779 7.1E-26 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 158 277 2.8E-20 T 11-10-2018 IPR000014 PAS domain Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 SMART SM00091 158 224 6.1E-9 T 11-10-2018 IPR000014 PAS domain Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 SMART SM00448 528 640 1.1E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 Pfam PF08448 PAS fold 165 274 2.1E-20 T 11-10-2018 IPR013656 PAS fold-4 Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 PIRSF PIRSF003182 5 779 2.9E-278 T 11-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 SUPERFAMILY SSF52172 526 650 4.55E-28 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 Gene3D G3DSA:1.10.287.970 5 92 3.0E-13 T 11-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 SMART SM00086 230 272 0.0025 T 11-10-2018 IPR001610 PAC motif Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 Gene3D G3DSA:3.30.565.10 350 515 3.1E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 SMART SM00387 397 513 2.1E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 452 1.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 491 1.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 510 1.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 SMART SM00388 285 350 2.4E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3747 e46231e8c7ffc826278ee0aa523c46a2 781 SUPERFAMILY SSF47384 279 351 8.63E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_0358 0805fc62335c38a3de874ef653c1f2ab 303 SUPERFAMILY SSF52540 9 237 8.81E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0358 0805fc62335c38a3de874ef653c1f2ab 303 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_0358 0805fc62335c38a3de874ef653c1f2ab 303 SMART SM00382 37 219 2.2E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0358 0805fc62335c38a3de874ef653c1f2ab 303 Pfam PF00005 ABC transporter 29 171 6.0E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_0358 0805fc62335c38a3de874ef653c1f2ab 303 Gene3D G3DSA:3.40.50.300 3 248 8.9E-68 T 11-10-2018 Patl_3083 748c821b280e3103c0e83839cce2471e 486 Pfam PF07196 Flagellin hook IN motif 136 195 1.6E-8 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 Patl_3083 748c821b280e3103c0e83839cce2471e 486 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 235 474 2.0E-42 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Patl_3083 748c821b280e3103c0e83839cce2471e 486 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 110 5.4E-18 T 11-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 Patl_2356 8299bad5544be11ff4a58883207caffc 879 Gene3D G3DSA:3.30.65.10 707 752 9.8E-6 T 11-10-2018 Patl_2356 8299bad5544be11ff4a58883207caffc 879 Gene3D G3DSA:3.30.65.10 753 815 2.9E-30 T 11-10-2018 Patl_2356 8299bad5544be11ff4a58883207caffc 879 Pfam PF01751 Toprim domain 5 149 9.9E-32 T 11-10-2018 IPR006171 TOPRIM domain Patl_2356 8299bad5544be11ff4a58883207caffc 879 Gene3D G3DSA:3.40.50.140 1 170 6.5E-65 T 11-10-2018 Patl_2356 8299bad5544be11ff4a58883207caffc 879 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Patl_2356 8299bad5544be11ff4a58883207caffc 879 SMART SM00493 3 139 1.2E-30 T 11-10-2018 IPR006171 TOPRIM domain Patl_2356 8299bad5544be11ff4a58883207caffc 879 SUPERFAMILY SSF56712 3 617 1.96E-201 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Patl_2356 8299bad5544be11ff4a58883207caffc 879 Pfam PF08272 Topoisomerase I zinc-ribbon-like 766 801 4.6E-13 T 11-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 Patl_2356 8299bad5544be11ff4a58883207caffc 879 Pfam PF08272 Topoisomerase I zinc-ribbon-like 832 873 1.1E-20 T 11-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 Patl_2356 8299bad5544be11ff4a58883207caffc 879 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 717 752 6.6E-10 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Patl_2356 8299bad5544be11ff4a58883207caffc 879 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 605 630 4.9E-6 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Patl_2356 8299bad5544be11ff4a58883207caffc 879 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 740 55.188 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Patl_2356 8299bad5544be11ff4a58883207caffc 879 SUPERFAMILY SSF57783 752 815 1.28E-18 T 11-10-2018 Patl_2356 8299bad5544be11ff4a58883207caffc 879 SMART SM00437 279 535 1.8E-117 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Patl_2356 8299bad5544be11ff4a58883207caffc 879 SMART SM00436 140 228 9.1E-49 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Patl_2356 8299bad5544be11ff4a58883207caffc 879 Gene3D G3DSA:1.10.460.10 172 579 4.3E-163 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Patl_2356 8299bad5544be11ff4a58883207caffc 879 Gene3D G3DSA:2.20.25.10 816 875 4.8E-27 T 11-10-2018 Patl_2356 8299bad5544be11ff4a58883207caffc 879 SUPERFAMILY SSF57783 708 751 2.89E-6 T 11-10-2018 Patl_2356 8299bad5544be11ff4a58883207caffc 879 Pfam PF01131 DNA topoisomerase 164 572 6.2E-130 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Patl_2356 8299bad5544be11ff4a58883207caffc 879 Gene3D G3DSA:2.70.20.10 220 481 4.3E-163 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Patl_2356 8299bad5544be11ff4a58883207caffc 879 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 639 2.3E-249 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Patl_2356 8299bad5544be11ff4a58883207caffc 879 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 4.0E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Patl_2356 8299bad5544be11ff4a58883207caffc 879 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 4.0E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Patl_2356 8299bad5544be11ff4a58883207caffc 879 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 4.0E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Patl_2356 8299bad5544be11ff4a58883207caffc 879 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 498 512 4.0E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Patl_2356 8299bad5544be11ff4a58883207caffc 879 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 4.0E-37 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Patl_2356 8299bad5544be11ff4a58883207caffc 879 Gene3D G3DSA:1.10.290.10 287 411 4.3E-163 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Patl_2356 8299bad5544be11ff4a58883207caffc 879 SUPERFAMILY SSF57783 817 874 1.24E-20 T 11-10-2018 Patl_1064 9bca015f0b8bc08e775b80432ddb6acc 202 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 123 199 1.9E-15 T 11-10-2018 IPR006260 TonB/TolA, C-terminal Patl_1064 9bca015f0b8bc08e775b80432ddb6acc 202 SUPERFAMILY SSF74653 113 193 9.03E-25 T 11-10-2018 Patl_1064 9bca015f0b8bc08e775b80432ddb6acc 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 157 174 3.2E-13 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Patl_1064 9bca015f0b8bc08e775b80432ddb6acc 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 117 138 3.2E-13 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Patl_1064 9bca015f0b8bc08e775b80432ddb6acc 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 138 156 3.2E-13 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Patl_1064 9bca015f0b8bc08e775b80432ddb6acc 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 59 69 3.2E-13 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Patl_1064 9bca015f0b8bc08e775b80432ddb6acc 202 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 122 199 4.7E-19 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 Patl_1064 9bca015f0b8bc08e775b80432ddb6acc 202 Gene3D G3DSA:3.30.1150.10 107 201 1.6E-23 T 11-10-2018 Patl_2268 113959b3b40de50a125aa1eb812a2792 117 Pfam PF01042 Endoribonuclease L-PSP 12 115 1.2E-25 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Patl_2268 113959b3b40de50a125aa1eb812a2792 117 SUPERFAMILY SSF55298 3 116 2.67E-33 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Patl_2268 113959b3b40de50a125aa1eb812a2792 117 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 92 110 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 Patl_2268 113959b3b40de50a125aa1eb812a2792 117 Gene3D G3DSA:3.30.1330.40 1 117 6.4E-42 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Patl_3331 59d6090b59cd67e037392e9fbfaab5d4 383 SUPERFAMILY SSF55973 111 232 3.34E-52 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Patl_3331 59d6090b59cd67e037392e9fbfaab5d4 383 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Patl_3331 59d6090b59cd67e037392e9fbfaab5d4 383 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 9.3E-70 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Patl_3331 59d6090b59cd67e037392e9fbfaab5d4 383 Gene3D G3DSA:3.30.300.10 11 270 1.2E-178 T 11-10-2018 Patl_3331 59d6090b59cd67e037392e9fbfaab5d4 383 SUPERFAMILY SSF55973 3 109 1.81E-48 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Patl_3331 59d6090b59cd67e037392e9fbfaab5d4 383 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Patl_3331 59d6090b59cd67e037392e9fbfaab5d4 383 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 8.3E-44 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Patl_3331 59d6090b59cd67e037392e9fbfaab5d4 383 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 2.6E-197 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Patl_3331 59d6090b59cd67e037392e9fbfaab5d4 383 PIRSF PIRSF000497 1 382 5.1E-176 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Patl_3331 59d6090b59cd67e037392e9fbfaab5d4 383 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 8.8E-45 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Patl_3331 59d6090b59cd67e037392e9fbfaab5d4 383 SUPERFAMILY SSF55973 233 382 3.06E-71 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Patl_3331 59d6090b59cd67e037392e9fbfaab5d4 383 Gene3D G3DSA:3.30.300.10 5 233 1.2E-178 T 11-10-2018 Patl_3331 59d6090b59cd67e037392e9fbfaab5d4 383 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.355 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Patl_3331 59d6090b59cd67e037392e9fbfaab5d4 383 Gene3D G3DSA:3.30.300.10 102 373 1.2E-178 T 11-10-2018 Patl_0336 9b362c32ca490c0bcc13239c7cfb49fa 412 Pfam PF13660 Domain of unknown function (DUF4147) 7 219 3.0E-68 T 11-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 Patl_0336 9b362c32ca490c0bcc13239c7cfb49fa 412 Gene3D G3DSA:3.40.50.10180 37 247 5.0E-123 T 11-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 Patl_0336 9b362c32ca490c0bcc13239c7cfb49fa 412 Gene3D G3DSA:3.40.1480.10 248 406 5.0E-123 T 11-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily Patl_0336 9b362c32ca490c0bcc13239c7cfb49fa 412 Pfam PF05161 MOFRL family 300 405 7.1E-33 T 11-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 Patl_0336 9b362c32ca490c0bcc13239c7cfb49fa 412 SUPERFAMILY SSF82544 2 411 7.19E-126 T 11-10-2018 Patl_2061 a1b6b82d0f0062c1f6cf4c0f92f06de6 286 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 157 280 1.6E-15 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Patl_2061 a1b6b82d0f0062c1f6cf4c0f92f06de6 286 SMART SM00047 131 270 8.5E-4 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 Patl_2061 a1b6b82d0f0062c1f6cf4c0f92f06de6 286 Gene3D G3DSA:1.10.530.10 142 283 1.3E-14 T 11-10-2018 Patl_0627 9a11b38b51d083a5da909a172dcedd31 678 Gene3D G3DSA:3.30.70.270 246 412 1.6E-46 T 11-10-2018 Patl_0627 9a11b38b51d083a5da909a172dcedd31 678 SMART SM00052 422 663 4.5E-88 T 11-10-2018 IPR001633 EAL domain Patl_0627 9a11b38b51d083a5da909a172dcedd31 678 SUPERFAMILY SSF55073 258 413 3.53E-39 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_0627 9a11b38b51d083a5da909a172dcedd31 678 Pfam PF00563 EAL domain 430 658 1.6E-68 T 11-10-2018 IPR001633 EAL domain Patl_0627 9a11b38b51d083a5da909a172dcedd31 678 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 405 2.0E-39 T 11-10-2018 IPR000160 GGDEF domain Patl_0627 9a11b38b51d083a5da909a172dcedd31 678 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 251 406 6.1E-35 T 11-10-2018 IPR000160 GGDEF domain Patl_0627 9a11b38b51d083a5da909a172dcedd31 678 SUPERFAMILY SSF141868 429 670 1.2E-79 T 11-10-2018 IPR035919 EAL domain superfamily Patl_0627 9a11b38b51d083a5da909a172dcedd31 678 Gene3D G3DSA:3.20.20.450 413 665 5.5E-88 T 11-10-2018 IPR035919 EAL domain superfamily Patl_0627 9a11b38b51d083a5da909a172dcedd31 678 SMART SM00267 242 412 9.4E-45 T 11-10-2018 IPR000160 GGDEF domain Patl_4192 e63ea7dd94340dfdc8113d8d73342ad8 443 SMART SM00382 49 332 5.9E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_4192 e63ea7dd94340dfdc8113d8d73342ad8 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.56 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Patl_4192 e63ea7dd94340dfdc8113d8d73342ad8 443 SMART SM01086 335 431 1.3E-21 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Patl_4192 e63ea7dd94340dfdc8113d8d73342ad8 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 107 7.0E-7 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Patl_4192 e63ea7dd94340dfdc8113d8d73342ad8 443 SUPERFAMILY SSF52540 3 441 1.43E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4192 e63ea7dd94340dfdc8113d8d73342ad8 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 6.1E-220 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Patl_4192 e63ea7dd94340dfdc8113d8d73342ad8 443 Gene3D G3DSA:1.10.8.60 335 440 1.1E-40 T 11-10-2018 Patl_4192 e63ea7dd94340dfdc8113d8d73342ad8 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 172 329 4.7E-42 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Patl_1720 ca24ee664e0235637a4afc5fcf0d02f6 529 Pfam PF01593 Flavin containing amine oxidoreductase 61 508 8.0E-30 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Patl_1720 ca24ee664e0235637a4afc5fcf0d02f6 529 SUPERFAMILY SSF51905 51 508 3.37E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1720 ca24ee664e0235637a4afc5fcf0d02f6 529 Gene3D G3DSA:1.20.1440.240 168 267 9.9E-148 T 11-10-2018 Patl_1720 ca24ee664e0235637a4afc5fcf0d02f6 529 Gene3D G3DSA:3.90.660.10 91 458 9.9E-148 T 11-10-2018 Patl_1720 ca24ee664e0235637a4afc5fcf0d02f6 529 SUPERFAMILY SSF54373 356 461 1.31E-18 T 11-10-2018 Patl_1720 ca24ee664e0235637a4afc5fcf0d02f6 529 Gene3D G3DSA:3.50.50.60 55 510 9.9E-148 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3914 417560f61ba88f3008e80acaabd69d00 918 Gene3D G3DSA:3.30.70.270 495 663 5.8E-45 T 11-10-2018 Patl_3914 417560f61ba88f3008e80acaabd69d00 918 SMART SM00052 678 917 1.8E-67 T 11-10-2018 IPR001633 EAL domain Patl_3914 417560f61ba88f3008e80acaabd69d00 918 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 375 496 7.4E-9 T 11-10-2018 IPR000014 PAS domain Patl_3914 417560f61ba88f3008e80acaabd69d00 918 SMART SM00267 491 662 7.9E-47 T 11-10-2018 IPR000160 GGDEF domain Patl_3914 417560f61ba88f3008e80acaabd69d00 918 Pfam PF00563 EAL domain 681 915 4.9E-66 T 11-10-2018 IPR001633 EAL domain Patl_3914 417560f61ba88f3008e80acaabd69d00 918 SUPERFAMILY SSF55785 368 489 1.94E-10 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3914 417560f61ba88f3008e80acaabd69d00 918 SUPERFAMILY SSF141868 682 916 2.62E-73 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3914 417560f61ba88f3008e80acaabd69d00 918 Pfam PF00990 Diguanylate cyclase, GGDEF domain 502 657 8.7E-33 T 11-10-2018 IPR000160 GGDEF domain Patl_3914 417560f61ba88f3008e80acaabd69d00 918 SUPERFAMILY SSF55073 507 662 2.43E-39 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3914 417560f61ba88f3008e80acaabd69d00 918 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 501 661 1.5E-34 T 11-10-2018 IPR000160 GGDEF domain Patl_3914 417560f61ba88f3008e80acaabd69d00 918 Gene3D G3DSA:3.30.450.20 366 494 6.3E-11 T 11-10-2018 Patl_3914 417560f61ba88f3008e80acaabd69d00 918 Gene3D G3DSA:3.20.20.450 664 918 9.8E-79 T 11-10-2018 IPR035919 EAL domain superfamily Patl_0800 27cfc4bf956ad745cdb9272c93f3d5e5 512 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 124 511 3.5E-155 T 11-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 Patl_0800 27cfc4bf956ad745cdb9272c93f3d5e5 512 Gene3D G3DSA:3.90.1210.30 19 101 5.9E-27 T 11-10-2018 Patl_0800 27cfc4bf956ad745cdb9272c93f3d5e5 512 SMART SM00858 27 98 2.0E-10 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Patl_0800 27cfc4bf956ad745cdb9272c93f3d5e5 512 Pfam PF08666 SAF domain 27 97 2.9E-7 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Patl_4121 139ccec63071daadc2514e2f62eba4f8 319 Pfam PF04198 Putative sugar-binding domain 62 317 1.9E-69 T 11-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 Patl_4121 139ccec63071daadc2514e2f62eba4f8 319 Gene3D G3DSA:3.40.50.1360 60 319 1.6E-64 T 11-10-2018 Patl_4121 139ccec63071daadc2514e2f62eba4f8 319 SUPERFAMILY SSF100950 62 317 6.98E-63 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Patl_4121 139ccec63071daadc2514e2f62eba4f8 319 Gene3D G3DSA:1.10.10.10 2 59 8.4E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3701 ebbefdbd6b4844ebf2006ffffd6b5133 210 Gene3D G3DSA:2.102.10.10 56 204 4.4E-44 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Patl_3701 ebbefdbd6b4844ebf2006ffffd6b5133 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 132 143 8.8E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Patl_3701 ebbefdbd6b4844ebf2006ffffd6b5133 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 176 188 8.8E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Patl_3701 ebbefdbd6b4844ebf2006ffffd6b5133 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 163 175 8.8E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 Patl_3701 ebbefdbd6b4844ebf2006ffffd6b5133 210 Pfam PF00355 Rieske [2Fe-2S] domain 124 189 4.1E-11 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Patl_3701 ebbefdbd6b4844ebf2006ffffd6b5133 210 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 22 204 1.6E-67 T 11-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Patl_3701 ebbefdbd6b4844ebf2006ffffd6b5133 210 SUPERFAMILY SSF50022 44 203 1.85E-38 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Patl_3701 ebbefdbd6b4844ebf2006ffffd6b5133 210 Gene3D G3DSA:1.20.5.510 13 53 1.6E-6 T 11-10-2018 Patl_3701 ebbefdbd6b4844ebf2006ffffd6b5133 210 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 14 53 2.8E-17 T 11-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 Patl_3206 de2861e94251907be104910dd188b034 258 Pfam PF00535 Glycosyl transferase family 2 3 149 1.4E-8 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Patl_3206 de2861e94251907be104910dd188b034 258 SUPERFAMILY SSF53448 3 256 3.28E-29 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3206 de2861e94251907be104910dd188b034 258 Gene3D G3DSA:3.90.550.10 1 224 3.8E-25 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3834 207c20c3b716792f34d498fb461b9100 417 Gene3D G3DSA:1.20.1250.20 225 408 4.8E-8 T 11-10-2018 Patl_3834 207c20c3b716792f34d498fb461b9100 417 Gene3D G3DSA:1.20.1250.20 2 202 8.2E-14 T 11-10-2018 Patl_3834 207c20c3b716792f34d498fb461b9100 417 Pfam PF07690 Major Facilitator Superfamily 19 368 8.6E-19 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_3834 207c20c3b716792f34d498fb461b9100 417 SUPERFAMILY SSF103473 1 411 1.57E-34 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_1211 f41985dfb01e9a9d4949126650de0a54 303 Gene3D G3DSA:3.40.50.300 114 171 5.0E-5 T 11-10-2018 Patl_1211 f41985dfb01e9a9d4949126650de0a54 303 TIGRFAM TIGR04352 HprK_rel_A: HprK-related kinase A 22 297 3.6E-100 T 11-10-2018 IPR027600 HprK-related kinase A Patl_1211 f41985dfb01e9a9d4949126650de0a54 303 SUPERFAMILY SSF53795 115 180 8.85E-13 T 11-10-2018 Patl_1015 7a97e7be826ed14034ef4ebe9fb34443 133 SUPERFAMILY SSF64263 1 119 1.83E-50 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1015 7a97e7be826ed14034ef4ebe9fb34443 133 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1015 7a97e7be826ed14034ef4ebe9fb34443 133 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.262 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1015 7a97e7be826ed14034ef4ebe9fb34443 133 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 4.8E-47 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1015 7a97e7be826ed14034ef4ebe9fb34443 133 Pfam PF01196 Ribosomal protein L17 20 116 4.0E-33 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1015 7a97e7be826ed14034ef4ebe9fb34443 133 Gene3D G3DSA:3.90.1030.10 1 117 1.0E-46 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3935 7e6f0f6d4e24b414e62eba835df0dd3f 415 Gene3D G3DSA:3.30.460.10 1 142 9.6E-56 T 11-10-2018 Patl_3935 7e6f0f6d4e24b414e62eba835df0dd3f 415 Pfam PF12626 Polymerase A arginine-rich C-terminus 290 408 6.1E-42 T 11-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain Patl_3935 7e6f0f6d4e24b414e62eba835df0dd3f 415 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 1 411 34.121 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 Patl_3935 7e6f0f6d4e24b414e62eba835df0dd3f 415 SUPERFAMILY SSF81891 145 381 1.44E-49 T 11-10-2018 Patl_3935 7e6f0f6d4e24b414e62eba835df0dd3f 415 SUPERFAMILY SSF81301 2 143 4.14E-37 T 11-10-2018 Patl_3935 7e6f0f6d4e24b414e62eba835df0dd3f 415 Gene3D G3DSA:1.10.3090.10 145 393 5.7E-93 T 11-10-2018 Patl_3935 7e6f0f6d4e24b414e62eba835df0dd3f 415 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 173 234 1.1E-21 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Patl_3935 7e6f0f6d4e24b414e62eba835df0dd3f 415 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 1 412 1.8E-156 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 Patl_3935 7e6f0f6d4e24b414e62eba835df0dd3f 415 Pfam PF01743 Poly A polymerase head domain 12 145 3.2E-38 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Patl_1152 67cf984f3c18eb246c3be816283d389d 320 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 121 2.3E-44 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Patl_1152 67cf984f3c18eb246c3be816283d389d 320 Gene3D G3DSA:3.30.470.20 198 301 2.5E-37 T 11-10-2018 Patl_1152 67cf984f3c18eb246c3be816283d389d 320 Gene3D G3DSA:3.30.1490.20 138 197 3.4E-26 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Patl_1152 67cf984f3c18eb246c3be816283d389d 320 SUPERFAMILY SSF56059 124 313 1.72E-54 T 11-10-2018 Patl_1152 67cf984f3c18eb246c3be816283d389d 320 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 313 3.7E-128 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Patl_1152 67cf984f3c18eb246c3be816283d389d 320 SUPERFAMILY SSF52440 3 123 5.75E-43 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Patl_1152 67cf984f3c18eb246c3be816283d389d 320 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 163.896 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Patl_1152 67cf984f3c18eb246c3be816283d389d 320 Gene3D G3DSA:3.40.50.20 2 130 2.6E-47 T 11-10-2018 Patl_1152 67cf984f3c18eb246c3be816283d389d 320 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 4.3E-74 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 Patl_2305 b7a89236a8c2393992b8bc68f5fba80b 385 PRINTS PR00359 B-class P450 signature 174 196 2.0E-26 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Patl_2305 b7a89236a8c2393992b8bc68f5fba80b 385 PRINTS PR00359 B-class P450 signature 300 315 2.0E-26 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Patl_2305 b7a89236a8c2393992b8bc68f5fba80b 385 PRINTS PR00359 B-class P450 signature 330 341 2.0E-26 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Patl_2305 b7a89236a8c2393992b8bc68f5fba80b 385 PRINTS PR00359 B-class P450 signature 321 330 2.0E-26 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Patl_2305 b7a89236a8c2393992b8bc68f5fba80b 385 PRINTS PR00359 B-class P450 signature 272 299 2.0E-26 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Patl_2305 b7a89236a8c2393992b8bc68f5fba80b 385 PRINTS PR00359 B-class P450 signature 75 86 2.0E-26 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Patl_2305 b7a89236a8c2393992b8bc68f5fba80b 385 PRINTS PR00359 B-class P450 signature 121 137 2.0E-26 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Patl_2305 b7a89236a8c2393992b8bc68f5fba80b 385 PRINTS PR00359 B-class P450 signature 255 266 2.0E-26 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 Patl_2305 b7a89236a8c2393992b8bc68f5fba80b 385 Pfam PF00067 Cytochrome P450 174 348 4.0E-18 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Patl_2305 b7a89236a8c2393992b8bc68f5fba80b 385 Gene3D G3DSA:1.10.630.10 2 385 1.5E-80 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Patl_2305 b7a89236a8c2393992b8bc68f5fba80b 385 SUPERFAMILY SSF48264 27 385 3.67E-66 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 Patl_1377 428fb83b65cd309a471feeae9324a4ae 427 Pfam PF00999 Sodium/hydrogen exchanger family 56 417 3.9E-54 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Patl_2460 177a5b2c198dab196b97ee626bc4aea7 837 Gene3D G3DSA:1.10.10.10 773 836 8.6E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2460 177a5b2c198dab196b97ee626bc4aea7 837 Pfam PF01580 FtsK/SpoIIIE family 451 664 4.3E-71 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Patl_2460 177a5b2c198dab196b97ee626bc4aea7 837 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 9 179 1.8E-41 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region Patl_2460 177a5b2c198dab196b97ee626bc4aea7 837 SUPERFAMILY SSF46785 769 834 7.71E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2460 177a5b2c198dab196b97ee626bc4aea7 837 SMART SM00843 769 834 1.3E-38 T 11-10-2018 IPR018541 FtsK gamma domain Patl_2460 177a5b2c198dab196b97ee626bc4aea7 837 SUPERFAMILY SSF52540 424 735 7.44E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2460 177a5b2c198dab196b97ee626bc4aea7 837 Gene3D G3DSA:3.30.980.40 343 447 2.3E-34 T 11-10-2018 Patl_2460 177a5b2c198dab196b97ee626bc4aea7 837 Pfam PF09397 Ftsk gamma domain 772 831 1.0E-25 T 11-10-2018 IPR018541 FtsK gamma domain Patl_2460 177a5b2c198dab196b97ee626bc4aea7 837 Gene3D G3DSA:3.40.50.300 448 750 1.1E-121 T 11-10-2018 Patl_2623 cea8d2abfdea25e20b918ae33dc466fb 153 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 40 82 3.0E-16 T 11-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Patl_2623 cea8d2abfdea25e20b918ae33dc466fb 153 SUPERFAMILY SSF69118 5 147 3.27E-39 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Patl_2623 cea8d2abfdea25e20b918ae33dc466fb 153 Pfam PF02627 Carboxymuconolactone decarboxylase family 35 98 2.7E-16 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Patl_2623 cea8d2abfdea25e20b918ae33dc466fb 153 Gene3D G3DSA:1.20.1290.10 1 149 6.8E-41 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Patl_2595 eab0e9b3cfbab67db655e5bf6dcb0451 544 Gene3D G3DSA:1.10.3080.10 1 431 1.5E-94 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Patl_2595 eab0e9b3cfbab67db655e5bf6dcb0451 544 Pfam PF00654 Voltage gated chloride channel 60 403 6.2E-84 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Patl_2595 eab0e9b3cfbab67db655e5bf6dcb0451 544 SUPERFAMILY SSF81340 3 415 2.49E-91 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Patl_2595 eab0e9b3cfbab67db655e5bf6dcb0451 544 PRINTS PR00762 Chloride channel signature 372 391 9.4E-22 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Patl_2595 eab0e9b3cfbab67db655e5bf6dcb0451 544 PRINTS PR00762 Chloride channel signature 354 370 9.4E-22 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Patl_2595 eab0e9b3cfbab67db655e5bf6dcb0451 544 PRINTS PR00762 Chloride channel signature 154 173 9.4E-22 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Patl_2595 eab0e9b3cfbab67db655e5bf6dcb0451 544 PRINTS PR00762 Chloride channel signature 320 340 9.4E-22 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Patl_2595 eab0e9b3cfbab67db655e5bf6dcb0451 544 PRINTS PR00762 Chloride channel signature 103 122 9.4E-22 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Patl_3732 827d290a50996b6903f5b23bb1a8e020 720 Pfam PF00614 Phospholipase D Active site motif 133 156 4.2E-6 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Patl_3732 827d290a50996b6903f5b23bb1a8e020 720 SUPERFAMILY SSF56024 261 434 3.14E-22 T 11-10-2018 Patl_3732 827d290a50996b6903f5b23bb1a8e020 720 SUPERFAMILY SSF56024 7 251 5.65E-31 T 11-10-2018 Patl_3732 827d290a50996b6903f5b23bb1a8e020 720 Pfam PF09335 SNARE associated Golgi protein 558 674 4.8E-19 T 11-10-2018 IPR032816 SNARE associated Golgi protein Patl_3732 827d290a50996b6903f5b23bb1a8e020 720 Gene3D G3DSA:3.30.870.10 255 413 8.2E-20 T 11-10-2018 Patl_3732 827d290a50996b6903f5b23bb1a8e020 720 Gene3D G3DSA:3.30.870.10 11 230 6.2E-25 T 11-10-2018 Patl_3732 827d290a50996b6903f5b23bb1a8e020 720 Pfam PF13091 PLD-like domain 266 400 1.0E-12 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Patl_3732 827d290a50996b6903f5b23bb1a8e020 720 SMART SM00155 357 384 4.7E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Patl_3732 827d290a50996b6903f5b23bb1a8e020 720 SMART SM00155 133 160 0.0037 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Patl_2124 ef5f5ba8c65b84f978d8c792553ec9a8 319 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 230 319 5.7E-35 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Patl_2124 ef5f5ba8c65b84f978d8c792553ec9a8 319 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 319 1.0E-132 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Patl_2124 ef5f5ba8c65b84f978d8c792553ec9a8 319 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 319 65.632 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Patl_2124 ef5f5ba8c65b84f978d8c792553ec9a8 319 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 2.5E-27 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Patl_2124 ef5f5ba8c65b84f978d8c792553ec9a8 319 SUPERFAMILY SSF53901 3 319 1.48E-68 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_2124 ef5f5ba8c65b84f978d8c792553ec9a8 319 Gene3D G3DSA:3.40.47.10 1 319 6.2E-119 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_3243 b6e31fa56e8720967f3a8ccf6b76985e 354 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 10 349 4.1E-107 T 11-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 Patl_3243 b6e31fa56e8720967f3a8ccf6b76985e 354 ProSitePatterns PS01348 MraY family signature 2. 150 161 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_3243 b6e31fa56e8720967f3a8ccf6b76985e 354 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 24.895 T 11-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 Patl_3243 b6e31fa56e8720967f3a8ccf6b76985e 354 Pfam PF00953 Glycosyl transferase family 4 76 233 1.5E-31 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Patl_1918 4b40a6cb101eea484277c83235d358f8 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 466 592 2.6E-36 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Patl_1918 4b40a6cb101eea484277c83235d358f8 600 Gene3D G3DSA:1.10.540.10 23 158 1.5E-16 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Patl_1918 4b40a6cb101eea484277c83235d358f8 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 34 5.4E-8 T 11-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria Patl_1918 4b40a6cb101eea484277c83235d358f8 600 Gene3D G3DSA:2.40.110.10 160 286 8.5E-30 T 11-10-2018 Patl_1918 4b40a6cb101eea484277c83235d358f8 600 SUPERFAMILY SSF47203 286 473 3.87E-46 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_1918 4b40a6cb101eea484277c83235d358f8 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 452 7.3E-19 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_1918 4b40a6cb101eea484277c83235d358f8 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 156 6.3E-12 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Patl_1918 4b40a6cb101eea484277c83235d358f8 600 Gene3D G3DSA:1.20.140.10 287 461 1.5E-41 T 11-10-2018 Patl_1918 4b40a6cb101eea484277c83235d358f8 600 SUPERFAMILY SSF56645 37 278 1.44E-58 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_1918 4b40a6cb101eea484277c83235d358f8 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 4.1E-19 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Patl_1396 14517c303b7478e9f6bb39efdedfbb28 109 Pfam PF00462 Glutaredoxin 16 80 2.2E-18 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Patl_1396 14517c303b7478e9f6bb39efdedfbb28 109 SUPERFAMILY SSF52833 1 101 7.67E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_1396 14517c303b7478e9f6bb39efdedfbb28 109 Gene3D G3DSA:3.40.30.10 2 107 1.6E-31 T 11-10-2018 Patl_1396 14517c303b7478e9f6bb39efdedfbb28 109 PIRSF PIRSF005894 1 107 6.1E-51 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 Patl_1396 14517c303b7478e9f6bb39efdedfbb28 109 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.4E-46 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related Patl_0495 6d8ee25786faa2ea6232812b5c763e0c 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Patl_0495 6d8ee25786faa2ea6232812b5c763e0c 431 Pfam PF00202 Aminotransferase class-III 34 396 7.7E-75 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Patl_0495 6d8ee25786faa2ea6232812b5c763e0c 431 Gene3D G3DSA:3.90.1150.10 7 419 1.6E-176 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_0495 6d8ee25786faa2ea6232812b5c763e0c 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 1.4E-195 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Patl_0495 6d8ee25786faa2ea6232812b5c763e0c 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.629 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Patl_0495 6d8ee25786faa2ea6232812b5c763e0c 431 Gene3D G3DSA:3.40.640.10 69 317 1.6E-176 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_0495 6d8ee25786faa2ea6232812b5c763e0c 431 SUPERFAMILY SSF53383 2 425 3.73E-135 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_1804 6b5785260cd90cedaeb93780b702d83c 473 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 54 87 - T 11-10-2018 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 Patl_1804 6b5785260cd90cedaeb93780b702d83c 473 Pfam PF01565 FAD binding domain 54 189 2.0E-29 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Patl_1804 6b5785260cd90cedaeb93780b702d83c 473 SUPERFAMILY SSF56176 27 220 1.92E-54 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Patl_1804 6b5785260cd90cedaeb93780b702d83c 473 Gene3D G3DSA:3.30.465.10 120 458 9.0E-108 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Patl_1804 6b5785260cd90cedaeb93780b702d83c 473 Gene3D G3DSA:3.30.43.10 29 107 3.0E-27 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Patl_1804 6b5785260cd90cedaeb93780b702d83c 473 Gene3D G3DSA:3.40.462.20 220 431 9.0E-108 T 11-10-2018 Patl_1679 ae637e01bb128aec34ae63b60862cf61 459 Gene3D G3DSA:2.60.40.10 363 450 2.3E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_1679 ae637e01bb128aec34ae63b60862cf61 459 SUPERFAMILY SSF53187 38 364 1.29E-49 T 11-10-2018 Patl_1679 ae637e01bb128aec34ae63b60862cf61 459 Pfam PF04389 Peptidase family M28 118 258 1.8E-19 T 11-10-2018 IPR007484 Peptidase M28 Patl_1679 ae637e01bb128aec34ae63b60862cf61 459 Gene3D G3DSA:3.40.630.10 26 362 8.0E-58 T 11-10-2018 Patl_1679 ae637e01bb128aec34ae63b60862cf61 459 SUPERFAMILY SSF49265 361 446 6.71E-11 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 Patl_0925 963f51f0d14eb1d689b30ea180986211 243 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 241 7.6E-62 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Patl_0925 963f51f0d14eb1d689b30ea180986211 243 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 140 240 8.1E-32 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 Patl_0925 963f51f0d14eb1d689b30ea180986211 243 SUPERFAMILY SSF63848 139 240 7.85E-30 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 Patl_0925 963f51f0d14eb1d689b30ea180986211 243 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 2 104 1.8E-13 T 11-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 Patl_0925 963f51f0d14eb1d689b30ea180986211 243 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 243 24.104 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Patl_0925 963f51f0d14eb1d689b30ea180986211 243 Gene3D G3DSA:3.30.750.120 1 118 5.6E-24 T 11-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily Patl_0925 963f51f0d14eb1d689b30ea180986211 243 Gene3D G3DSA:2.160.20.70 136 243 4.6E-33 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 Patl_3544 0295b10be2f4b31e6f96a98e1587a951 711 SUPERFAMILY SSF52743 264 592 6.41E-69 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Patl_3544 0295b10be2f4b31e6f96a98e1587a951 711 Pfam PF00082 Subtilase family 281 583 9.7E-43 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Patl_3544 0295b10be2f4b31e6f96a98e1587a951 711 Gene3D G3DSA:3.40.50.200 254 595 2.7E-77 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Patl_3544 0295b10be2f4b31e6f96a98e1587a951 711 PRINTS PR00723 Subtilisin serine protease family (S8) signature 281 300 1.6E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Patl_3544 0295b10be2f4b31e6f96a98e1587a951 711 PRINTS PR00723 Subtilisin serine protease family (S8) signature 329 342 1.6E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Patl_3544 0295b10be2f4b31e6f96a98e1587a951 711 PRINTS PR00723 Subtilisin serine protease family (S8) signature 528 544 1.6E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Patl_3544 0295b10be2f4b31e6f96a98e1587a951 711 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 286 297 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site Patl_2508 1ca1c8e6b49b5c8c78c86d1ad48c2d64 127 SUPERFAMILY SSF55021 61 125 4.23E-17 T 11-10-2018 Patl_2508 1ca1c8e6b49b5c8c78c86d1ad48c2d64 127 SUPERFAMILY SSF55021 1 55 2.93E-14 T 11-10-2018 Patl_2508 1ca1c8e6b49b5c8c78c86d1ad48c2d64 127 Gene3D G3DSA:3.30.2130.10 1 127 9.0E-35 T 11-10-2018 Patl_2508 1ca1c8e6b49b5c8c78c86d1ad48c2d64 127 Pfam PF13840 ACT domain 58 119 1.6E-18 T 11-10-2018 IPR027795 CASTOR, ACT domain Patl_2508 1ca1c8e6b49b5c8c78c86d1ad48c2d64 127 PIRSF PIRSF008459 2 127 2.4E-37 T 11-10-2018 IPR016540 Uncharacterised conserved protein UCP008459 Patl_3275 cc96f672d9d101e81f4a42014e53875d 513 Pfam PF13347 MFS/sugar transport protein 249 491 4.6E-41 T 11-10-2018 Patl_3275 cc96f672d9d101e81f4a42014e53875d 513 Pfam PF13347 MFS/sugar transport protein 11 234 5.8E-54 T 11-10-2018 Patl_3275 cc96f672d9d101e81f4a42014e53875d 513 Gene3D G3DSA:1.20.1250.20 283 499 3.1E-13 T 11-10-2018 Patl_3275 cc96f672d9d101e81f4a42014e53875d 513 SUPERFAMILY SSF103473 14 495 2.18E-31 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_3275 cc96f672d9d101e81f4a42014e53875d 513 Gene3D G3DSA:1.20.1250.20 16 246 2.5E-12 T 11-10-2018 Patl_3325 a55403782488cb8ff7b4c2fda2c28c93 197 SUPERFAMILY SSF109604 5 185 4.33E-39 T 11-10-2018 Patl_3325 a55403782488cb8ff7b4c2fda2c28c93 197 Gene3D G3DSA:1.10.3210.10 1 196 1.7E-48 T 11-10-2018 Patl_3325 a55403782488cb8ff7b4c2fda2c28c93 197 Pfam PF13023 HD domain 14 178 2.8E-50 T 11-10-2018 IPR006674 HD domain Patl_2643 e53ec216b32536c93aff460e553d323d 228 Pfam PF01081 KDPG and KHG aldolase 18 197 2.4E-35 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Patl_2643 e53ec216b32536c93aff460e553d323d 228 SUPERFAMILY SSF51569 15 208 2.56E-50 T 11-10-2018 Patl_2643 e53ec216b32536c93aff460e553d323d 228 Gene3D G3DSA:3.20.20.70 10 223 7.5E-62 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_1149 3b231abc76433f9116226b0d46eb2b5d 239 SUPERFAMILY SSF52172 1 161 2.85E-25 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1149 3b231abc76433f9116226b0d46eb2b5d 239 Pfam PF00072 Response regulator receiver domain 5 112 1.7E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1149 3b231abc76433f9116226b0d46eb2b5d 239 Gene3D G3DSA:3.40.50.2300 1 129 1.7E-23 T 11-10-2018 Patl_1149 3b231abc76433f9116226b0d46eb2b5d 239 SMART SM00448 2 112 2.8E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1149 3b231abc76433f9116226b0d46eb2b5d 239 Pfam PF04397 LytTr DNA-binding domain 140 234 7.4E-21 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Patl_1149 3b231abc76433f9116226b0d46eb2b5d 239 SMART SM00850 138 235 3.3E-28 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Patl_1149 3b231abc76433f9116226b0d46eb2b5d 239 Gene3D G3DSA:2.40.50.40 131 198 1.7E-11 T 11-10-2018 Patl_1861 3fb4d8c73bf6b786751f9261259591df 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 182 201 6.0E-11 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Patl_1861 3fb4d8c73bf6b786751f9261259591df 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 28 49 6.0E-11 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Patl_1861 3fb4d8c73bf6b786751f9261259591df 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 145 169 6.0E-11 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Patl_1861 3fb4d8c73bf6b786751f9261259591df 258 Pfam PF01061 ABC-2 type transporter 12 228 1.9E-36 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Patl_1861 3fb4d8c73bf6b786751f9261259591df 258 TIGRFAM TIGR03861 phenyl_ABC_PedC: alcohol ABC transporter, permease protein 7 255 1.9E-126 T 11-10-2018 IPR022403 Alcohol ABC transporter, permease protein Patl_1861 3fb4d8c73bf6b786751f9261259591df 258 PIRSF PIRSF006648 3 257 1.2E-40 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Patl_4016 93973eeab8bac9fa038c30c022228ae9 396 Gene3D G3DSA:3.90.1150.10 6 392 3.5E-150 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_4016 93973eeab8bac9fa038c30c022228ae9 396 Gene3D G3DSA:3.40.640.10 60 300 3.5E-150 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_4016 93973eeab8bac9fa038c30c022228ae9 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Patl_4016 93973eeab8bac9fa038c30c022228ae9 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.2E-31 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Patl_4016 93973eeab8bac9fa038c30c022228ae9 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.2E-31 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Patl_4016 93973eeab8bac9fa038c30c022228ae9 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.2E-31 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Patl_4016 93973eeab8bac9fa038c30c022228ae9 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.2E-31 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 Patl_4016 93973eeab8bac9fa038c30c022228ae9 396 SUPERFAMILY SSF53383 1 392 8.23E-105 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_4016 93973eeab8bac9fa038c30c022228ae9 396 Pfam PF00155 Aminotransferase class I and II 28 392 1.0E-74 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Patl_3672 9b63146fd93fe0b7742abee2aa8d57c9 381 Gene3D G3DSA:1.20.1090.10 181 380 2.5E-31 T 11-10-2018 Patl_3672 9b63146fd93fe0b7742abee2aa8d57c9 381 SUPERFAMILY SSF56796 3 379 4.84E-94 T 11-10-2018 Patl_3672 9b63146fd93fe0b7742abee2aa8d57c9 381 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 353 1.7E-78 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Patl_3672 9b63146fd93fe0b7742abee2aa8d57c9 381 Gene3D G3DSA:3.40.50.1970 1 180 1.5E-48 T 11-10-2018 Patl_1782 44cd1e867bbb9675d439ebade80447c9 67 Gene3D G3DSA:2.20.25.10 10 67 2.4E-17 T 11-10-2018 Patl_1782 44cd1e867bbb9675d439ebade80447c9 67 Pfam PF03966 Trm112p-like protein 4 45 1.9E-8 T 11-10-2018 IPR005651 Trm112-like Patl_1782 44cd1e867bbb9675d439ebade80447c9 67 SUPERFAMILY SSF158997 1 60 4.71E-17 T 11-10-2018 Patl_1782 44cd1e867bbb9675d439ebade80447c9 67 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 3 59 25.612 T 11-10-2018 IPR038053 Uncharacterised protein family UPF0434 Patl_3800 6f41a90dd836f3d5f0c1dd2743747d37 404 Gene3D G3DSA:2.40.420.20 297 366 3.7E-100 T 11-10-2018 Patl_3800 6f41a90dd836f3d5f0c1dd2743747d37 404 SUPERFAMILY SSF111369 48 292 1.12E-75 T 11-10-2018 Patl_3800 6f41a90dd836f3d5f0c1dd2743747d37 404 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 368 5.6E-80 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Patl_3800 6f41a90dd836f3d5f0c1dd2743747d37 404 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 286 1.8E-12 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Patl_3800 6f41a90dd836f3d5f0c1dd2743747d37 404 Gene3D G3DSA:1.10.287.470 94 167 3.7E-100 T 11-10-2018 Patl_3800 6f41a90dd836f3d5f0c1dd2743747d37 404 Gene3D G3DSA:2.40.50.100 59 203 3.7E-100 T 11-10-2018 Patl_3800 6f41a90dd836f3d5f0c1dd2743747d37 404 Pfam PF00529 HlyD membrane-fusion protein of T1SS 287 352 1.6E-6 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Patl_3800 6f41a90dd836f3d5f0c1dd2743747d37 404 Gene3D G3DSA:2.40.30.170 48 296 3.7E-100 T 11-10-2018 Patl_2893 368be6002e7ec96e32ff54328121ee0d 214 SUPERFAMILY SSF52540 1 211 6.15E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2893 368be6002e7ec96e32ff54328121ee0d 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Patl_2893 368be6002e7ec96e32ff54328121ee0d 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.6E-15 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Patl_2893 368be6002e7ec96e32ff54328121ee0d 214 Pfam PF00406 Adenylate kinase 5 185 7.9E-59 T 11-10-2018 Patl_2893 368be6002e7ec96e32ff54328121ee0d 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 51.142 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Patl_2893 368be6002e7ec96e32ff54328121ee0d 214 PRINTS PR00094 Adenylate kinase signature 81 97 5.9E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Patl_2893 368be6002e7ec96e32ff54328121ee0d 214 PRINTS PR00094 Adenylate kinase signature 173 187 5.9E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Patl_2893 368be6002e7ec96e32ff54328121ee0d 214 PRINTS PR00094 Adenylate kinase signature 4 17 5.9E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Patl_2893 368be6002e7ec96e32ff54328121ee0d 214 PRINTS PR00094 Adenylate kinase signature 32 46 5.9E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Patl_2893 368be6002e7ec96e32ff54328121ee0d 214 PRINTS PR00094 Adenylate kinase signature 156 171 5.9E-36 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Patl_2893 368be6002e7ec96e32ff54328121ee0d 214 Gene3D G3DSA:3.40.50.300 1 213 9.5E-81 T 11-10-2018 Patl_2893 368be6002e7ec96e32ff54328121ee0d 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 4.6E-76 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Patl_1931 ac705d580d7d7c218a78d92b44f4d952 628 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 139 593 1.6E-211 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Patl_1931 ac705d580d7d7c218a78d92b44f4d952 628 Pfam PF13667 ThiC-associated domain 29 98 1.0E-22 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Patl_1931 ac705d580d7d7c218a78d92b44f4d952 628 Gene3D G3DSA:3.20.20.540 212 526 3.9E-152 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Patl_1931 ac705d580d7d7c218a78d92b44f4d952 628 Pfam PF01964 Radical SAM ThiC family 141 591 4.4E-198 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Patl_1931 ac705d580d7d7c218a78d92b44f4d952 628 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 139 595 98.507 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Patl_2946 1f86beabe68c8ede45992dc4a2b1c313 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 156 4.9E-67 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Patl_2946 1f86beabe68c8ede45992dc4a2b1c313 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 45.946 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Patl_2946 1f86beabe68c8ede45992dc4a2b1c313 173 Gene3D G3DSA:3.30.420.10 2 159 5.1E-51 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Patl_2946 1f86beabe68c8ede45992dc4a2b1c313 173 SUPERFAMILY SSF53098 3 156 8.72E-54 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_2946 1f86beabe68c8ede45992dc4a2b1c313 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 Patl_2946 1f86beabe68c8ede45992dc4a2b1c313 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.5E-62 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Patl_2946 1f86beabe68c8ede45992dc4a2b1c313 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 3.2E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Patl_2946 1f86beabe68c8ede45992dc4a2b1c313 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 3.2E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Patl_2946 1f86beabe68c8ede45992dc4a2b1c313 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 3.2E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Patl_2946 1f86beabe68c8ede45992dc4a2b1c313 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 3.2E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Patl_2946 1f86beabe68c8ede45992dc4a2b1c313 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 3.2E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Patl_1823 4afbf01c4fdb7cfdba75379bfab1af97 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 1.4E-12 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_1823 4afbf01c4fdb7cfdba75379bfab1af97 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 11-10-2018 Patl_1823 4afbf01c4fdb7cfdba75379bfab1af97 341 SUPERFAMILY SSF47413 5 64 8.44E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_1823 4afbf01c4fdb7cfdba75379bfab1af97 341 Gene3D G3DSA:1.10.260.40 1 59 2.6E-15 T 11-10-2018 Patl_1823 4afbf01c4fdb7cfdba75379bfab1af97 341 Gene3D G3DSA:3.40.50.2300 60 316 1.5E-59 T 11-10-2018 Patl_1823 4afbf01c4fdb7cfdba75379bfab1af97 341 SUPERFAMILY SSF53822 79 339 2.57E-54 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Patl_1823 4afbf01c4fdb7cfdba75379bfab1af97 341 Gene3D G3DSA:3.40.50.2300 170 299 1.5E-59 T 11-10-2018 Patl_1823 4afbf01c4fdb7cfdba75379bfab1af97 341 SMART SM00354 6 76 8.3E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_1823 4afbf01c4fdb7cfdba75379bfab1af97 341 Pfam PF13377 Periplasmic binding protein-like domain 178 337 3.6E-30 T 11-10-2018 Patl_1762 46e6f6dc78b4cf0f8989dfdf14fb1d03 572 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 11 404 1.1E-154 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Patl_1762 46e6f6dc78b4cf0f8989dfdf14fb1d03 572 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 220 239 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Patl_1762 46e6f6dc78b4cf0f8989dfdf14fb1d03 572 Pfam PF00266 Aminotransferase class-V 29 395 1.0E-138 T 11-10-2018 IPR000192 Aminotransferase class V domain Patl_1762 46e6f6dc78b4cf0f8989dfdf14fb1d03 572 Pfam PF02657 Fe-S metabolism associated domain 450 567 3.2E-33 T 11-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like Patl_1762 46e6f6dc78b4cf0f8989dfdf14fb1d03 572 Gene3D G3DSA:3.90.1150.10 12 400 6.1E-162 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_1762 46e6f6dc78b4cf0f8989dfdf14fb1d03 572 SUPERFAMILY SSF53383 11 405 3.34E-119 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_1762 46e6f6dc78b4cf0f8989dfdf14fb1d03 572 Gene3D G3DSA:3.40.640.10 39 298 6.1E-162 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_1762 46e6f6dc78b4cf0f8989dfdf14fb1d03 572 SUPERFAMILY SSF82649 450 569 1.99E-30 T 11-10-2018 Patl_1762 46e6f6dc78b4cf0f8989dfdf14fb1d03 572 Gene3D G3DSA:3.90.1010.10 442 571 7.3E-33 T 11-10-2018 Patl_0198 eb5b4b80919524aedb057da0ba4c46b0 318 PRINTS PR00721 Stomatin signature 135 158 3.0E-30 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Patl_0198 eb5b4b80919524aedb057da0ba4c46b0 318 PRINTS PR00721 Stomatin signature 159 177 3.0E-30 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Patl_0198 eb5b4b80919524aedb057da0ba4c46b0 318 PRINTS PR00721 Stomatin signature 178 199 3.0E-30 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Patl_0198 eb5b4b80919524aedb057da0ba4c46b0 318 PRINTS PR00721 Stomatin signature 80 101 3.0E-30 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Patl_0198 eb5b4b80919524aedb057da0ba4c46b0 318 PRINTS PR00721 Stomatin signature 115 132 3.0E-30 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Patl_0198 eb5b4b80919524aedb057da0ba4c46b0 318 PRINTS PR00721 Stomatin signature 32 54 3.0E-30 T 11-10-2018 IPR001972 Stomatin family GO:0016020 Patl_0198 eb5b4b80919524aedb057da0ba4c46b0 318 Pfam PF16200 C-terminal region of band_7 248 309 2.5E-17 T 11-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 Patl_0198 eb5b4b80919524aedb057da0ba4c46b0 318 SMART SM00244 25 183 6.0E-61 T 11-10-2018 IPR001107 Band 7 domain Patl_0198 eb5b4b80919524aedb057da0ba4c46b0 318 Pfam PF01145 SPFH domain / Band 7 family 30 210 3.1E-30 T 11-10-2018 IPR001107 Band 7 domain Patl_0198 eb5b4b80919524aedb057da0ba4c46b0 318 Gene3D G3DSA:3.30.479.30 53 185 2.1E-43 T 11-10-2018 Patl_0198 eb5b4b80919524aedb057da0ba4c46b0 318 SUPERFAMILY SSF117892 56 190 8.11E-41 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily Patl_2301 0a0ffd1a2fe82dc1be30fc293ebb0cc7 244 SMART SM00862 158 233 1.7E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_2301 0a0ffd1a2fe82dc1be30fc293ebb0cc7 244 SUPERFAMILY SSF52172 4 125 8.4E-40 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2301 0a0ffd1a2fe82dc1be30fc293ebb0cc7 244 SMART SM00448 6 117 4.7E-42 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2301 0a0ffd1a2fe82dc1be30fc293ebb0cc7 244 Gene3D G3DSA:3.40.50.2300 1 132 2.0E-37 T 11-10-2018 Patl_2301 0a0ffd1a2fe82dc1be30fc293ebb0cc7 244 Pfam PF00072 Response regulator receiver domain 8 118 7.3E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2301 0a0ffd1a2fe82dc1be30fc293ebb0cc7 244 SUPERFAMILY SSF46894 142 234 2.38E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_2301 0a0ffd1a2fe82dc1be30fc293ebb0cc7 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 233 1.9E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_2301 0a0ffd1a2fe82dc1be30fc293ebb0cc7 244 Gene3D G3DSA:1.10.10.10 136 243 1.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3506 5a5c305a1c6a7c1b20e87e114002344a 311 Gene3D G3DSA:3.90.245.10 1 311 9.6E-108 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like Patl_3506 5a5c305a1c6a7c1b20e87e114002344a 311 SUPERFAMILY SSF53590 1 310 6.28E-92 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like Patl_3506 5a5c305a1c6a7c1b20e87e114002344a 311 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 303 7.2E-82 T 11-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain Patl_1422 1eb80b69fff8b69c88c49be676ae3e0b 409 SUPERFAMILY SSF54506 8 187 6.75E-68 T 11-10-2018 Patl_1422 1eb80b69fff8b69c88c49be676ae3e0b 409 Pfam PF04303 PrpF protein 11 405 6.5E-166 T 11-10-2018 IPR007400 PrpF protein Patl_1422 1eb80b69fff8b69c88c49be676ae3e0b 409 Gene3D G3DSA:3.10.310.10 195 388 4.0E-69 T 11-10-2018 Patl_1422 1eb80b69fff8b69c88c49be676ae3e0b 409 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 10 409 2.1E-216 T 11-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 Patl_1422 1eb80b69fff8b69c88c49be676ae3e0b 409 SUPERFAMILY SSF54506 199 407 8.63E-74 T 11-10-2018 Patl_1422 1eb80b69fff8b69c88c49be676ae3e0b 409 Gene3D G3DSA:3.10.310.10 3 194 6.5E-78 T 11-10-2018 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 Pfam PF00842 Alanine racemase, C-terminal domain 249 371 5.2E-40 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 Pfam PF01168 Alanine racemase, N-terminal domain 9 235 4.0E-62 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 SUPERFAMILY SSF50621 244 374 7.32E-46 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 Hamap MF_01201 Alanine racemase. 2 373 32.377 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 PRINTS PR00992 Alanine racemase signature 132 144 1.0E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 PRINTS PR00992 Alanine racemase signature 166 177 1.0E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 PRINTS PR00992 Alanine racemase signature 208 235 1.0E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 PRINTS PR00992 Alanine racemase signature 355 368 1.0E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 PRINTS PR00992 Alanine racemase signature 72 90 1.0E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 PRINTS PR00992 Alanine racemase signature 282 297 1.0E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 PRINTS PR00992 Alanine racemase signature 37 53 1.0E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 PRINTS PR00992 Alanine racemase signature 265 280 1.0E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 PRINTS PR00992 Alanine racemase signature 303 320 1.0E-63 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 SUPERFAMILY SSF51419 9 250 2.06E-60 T 11-10-2018 IPR029066 PLP-binding barrel Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 Gene3D G3DSA:3.20.20.10 11 233 2.1E-116 T 11-10-2018 IPR029066 PLP-binding barrel Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 Gene3D G3DSA:2.40.37.10 9 371 2.1E-116 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 SMART SM01005 249 373 2.3E-64 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 42 52 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Patl_4025 2c7ca5b7704a6cb3c86d333a11dfbff4 375 TIGRFAM TIGR00492 alr: alanine racemase 4 373 5.8E-105 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Patl_4226 4103de70ee5ddb821507718ec4e79ee3 775 SUPERFAMILY SSF47781 559 630 8.45E-20 T 11-10-2018 IPR010994 RuvA domain 2-like Patl_4226 4103de70ee5ddb821507718ec4e79ee3 775 SUPERFAMILY SSF47781 468 554 1.22E-25 T 11-10-2018 IPR010994 RuvA domain 2-like Patl_4226 4103de70ee5ddb821507718ec4e79ee3 775 SUPERFAMILY SSF158832 2 318 5.1E-115 T 11-10-2018 Patl_4226 4103de70ee5ddb821507718ec4e79ee3 775 Pfam PF09371 Tex-like protein N-terminal domain 6 190 3.7E-67 T 11-10-2018 IPR018974 Tex-like protein, N-terminal Patl_4226 4103de70ee5ddb821507718ec4e79ee3 775 Pfam PF00575 S1 RNA binding domain 646 718 1.5E-18 T 11-10-2018 IPR003029 S1 domain GO:0003676 Patl_4226 4103de70ee5ddb821507718ec4e79ee3 775 Gene3D G3DSA:1.10.3500.10 109 496 3.3E-152 T 11-10-2018 IPR023323 Tex-like domain superfamily Patl_4226 4103de70ee5ddb821507718ec4e79ee3 775 SUPERFAMILY SSF50249 636 723 1.49E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_4226 4103de70ee5ddb821507718ec4e79ee3 775 Pfam PF12836 Helix-hairpin-helix motif 489 553 9.8E-27 T 11-10-2018 Patl_4226 4103de70ee5ddb821507718ec4e79ee3 775 Gene3D G3DSA:1.10.10.650 1 106 8.0E-39 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily Patl_4226 4103de70ee5ddb821507718ec4e79ee3 775 SMART SM00732 323 422 1.3E-34 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Patl_4226 4103de70ee5ddb821507718ec4e79ee3 775 SUPERFAMILY SSF53098 319 467 1.67E-47 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_4226 4103de70ee5ddb821507718ec4e79ee3 775 Gene3D G3DSA:2.40.50.140 629 722 2.2E-28 T 11-10-2018 Patl_4226 4103de70ee5ddb821507718ec4e79ee3 775 SMART SM00316 647 718 1.1E-23 T 11-10-2018 IPR022967 RNA-binding domain, S1 Patl_4226 4103de70ee5ddb821507718ec4e79ee3 775 Gene3D G3DSA:3.30.420.140 322 449 3.3E-152 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Patl_4226 4103de70ee5ddb821507718ec4e79ee3 775 Pfam PF16921 Tex protein YqgF-like domain 323 449 3.7E-50 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain Patl_4226 4103de70ee5ddb821507718ec4e79ee3 775 Gene3D G3DSA:1.10.150.310 497 628 2.2E-48 T 11-10-2018 Patl_1841 5546b4afa170c822cb230570a004c744 554 SUPERFAMILY SSF53649 94 545 2.33E-101 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_1841 5546b4afa170c822cb230570a004c744 554 ProSitePatterns PS00149 Sulfatases signature 2. 188 198 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_1841 5546b4afa170c822cb230570a004c744 554 ProSitePatterns PS00523 Sulfatases signature 1. 141 153 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_1841 5546b4afa170c822cb230570a004c744 554 Pfam PF00884 Sulfatase 95 404 2.5E-57 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_1841 5546b4afa170c822cb230570a004c744 554 Gene3D G3DSA:3.40.720.10 94 548 1.2E-139 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_2424 37e587b585aaa363d7e0a34554b394f4 480 SUPERFAMILY SSF56176 190 355 5.12E-50 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Patl_2424 37e587b585aaa363d7e0a34554b394f4 480 SUPERFAMILY SSF55447 360 470 6.93E-26 T 11-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Patl_2424 37e587b585aaa363d7e0a34554b394f4 480 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 191 354 9.4E-48 T 11-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 Patl_2424 37e587b585aaa363d7e0a34554b394f4 480 SUPERFAMILY SSF54292 2 87 6.42E-18 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Patl_2424 37e587b585aaa363d7e0a34554b394f4 480 SMART SM01092 362 465 2.4E-28 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Patl_2424 37e587b585aaa363d7e0a34554b394f4 480 Gene3D G3DSA:3.10.20.30 1 86 2.2E-27 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_2424 37e587b585aaa363d7e0a34554b394f4 480 SUPERFAMILY SSF47741 94 177 3.4E-33 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Patl_2424 37e587b585aaa363d7e0a34554b394f4 480 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Patl_2424 37e587b585aaa363d7e0a34554b394f4 480 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 73 1.6E-6 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Patl_2424 37e587b585aaa363d7e0a34554b394f4 480 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 362 464 1.1E-27 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Patl_2424 37e587b585aaa363d7e0a34554b394f4 480 Pfam PF01799 [2Fe-2S] binding domain 83 155 1.5E-30 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Patl_2424 37e587b585aaa363d7e0a34554b394f4 480 Gene3D G3DSA:3.30.390.50 358 470 4.2E-25 T 11-10-2018 Patl_2424 37e587b585aaa363d7e0a34554b394f4 480 PIRSF PIRSF036557 1 478 2.4E-170 T 11-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria Patl_2424 37e587b585aaa363d7e0a34554b394f4 480 Gene3D G3DSA:3.30.465.10 191 355 1.9E-55 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Patl_2424 37e587b585aaa363d7e0a34554b394f4 480 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 2 465 4.1E-175 T 11-10-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 Patl_2424 37e587b585aaa363d7e0a34554b394f4 480 Gene3D G3DSA:1.10.150.120 87 190 1.9E-33 T 11-10-2018 Patl_3490 faba383ebc4b01def665beab94a38256 542 SUPERFAMILY SSF111283 41 536 1.44E-95 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Patl_3490 faba383ebc4b01def665beab94a38256 542 Pfam PF01523 Putative modulator of DNA gyrase 59 384 1.4E-58 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Patl_3490 faba383ebc4b01def665beab94a38256 542 Gene3D G3DSA:3.30.2290.10 33 231 1.8E-18 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Patl_3642 dc59d94481f7a8b3faa80c5ce5571013 144 SUPERFAMILY SSF102546 1 136 9.81E-29 T 11-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Patl_3642 dc59d94481f7a8b3faa80c5ce5571013 144 Gene3D G3DSA:3.40.1650.10 1 138 1.6E-29 T 11-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Patl_3642 dc59d94481f7a8b3faa80c5ce5571013 144 Pfam PF05025 RbsD / FucU transport protein family 1 136 6.5E-31 T 11-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 Patl_1843 e122eff7ece0dc9244e9a219235863da 279 Gene3D G3DSA:1.10.150.130 1 82 3.1E-26 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Patl_1843 e122eff7ece0dc9244e9a219235863da 279 Pfam PF00589 Phage integrase family 93 261 1.2E-24 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Patl_1843 e122eff7ece0dc9244e9a219235863da 279 TIGRFAM TIGR02249 integrase_gron: integron integrase 1 265 2.0E-100 T 11-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 Patl_1843 e122eff7ece0dc9244e9a219235863da 279 Gene3D G3DSA:1.10.443.10 84 266 5.9E-44 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Patl_1843 e122eff7ece0dc9244e9a219235863da 279 SUPERFAMILY SSF56349 4 262 2.83E-26 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Patl_1843 e122eff7ece0dc9244e9a219235863da 279 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 5 75 5.6E-20 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SMART SM00028 203 236 0.23 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SMART SM00028 237 270 150.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SMART SM00028 892 925 100.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SMART SM00028 483 516 99.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SMART SM00028 169 202 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SMART SM00028 585 618 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SMART SM00028 381 414 35.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SMART SM00028 551 584 170.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SMART SM00028 789 822 82.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SMART SM00028 517 550 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SMART SM00028 721 754 21.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SMART SM00028 313 346 2.4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SMART SM00028 653 686 4.7E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SUPERFAMILY SSF48452 316 621 6.01E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 Gene3D G3DSA:1.25.40.10 764 934 1.7E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 Gene3D G3DSA:1.25.40.10 648 758 5.3E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SUPERFAMILY SSF48452 138 260 2.23E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 Gene3D G3DSA:1.25.40.10 131 294 3.5E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 Pfam PF14559 Tetratricopeptide repeat 870 937 9.5E-6 T 11-10-2018 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 Gene3D G3DSA:1.25.40.10 295 644 7.6E-40 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 Pfam PF13432 Tetratricopeptide repeat 495 544 8.2E-7 T 11-10-2018 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SUPERFAMILY SSF48452 625 925 1.78E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 SUPERFAMILY SSF48452 31 122 1.04E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 Gene3D G3DSA:1.25.40.10 23 130 1.3E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 Pfam PF13181 Tetratricopeptide repeat 654 686 0.0018 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 Pfam PF13181 Tetratricopeptide repeat 203 235 0.0036 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2838 86032fd63cce331a40c1cc9426d2fd4a 940 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 28 919 3.6E-95 T 11-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative Patl_3034 da86d8d6d9a668c899c5322095875670 374 SUPERFAMILY SSF160544 249 353 2.62E-38 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Patl_3034 da86d8d6d9a668c899c5322095875670 374 Gene3D G3DSA:3.40.1690.10 215 357 4.1E-54 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Patl_3034 da86d8d6d9a668c899c5322095875670 374 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 6 350 1.5E-118 T 11-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 Patl_3034 da86d8d6d9a668c899c5322095875670 374 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 345 5.2E-117 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Patl_3034 da86d8d6d9a668c899c5322095875670 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 8 30 1.9E-37 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Patl_3034 da86d8d6d9a668c899c5322095875670 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 226 243 1.9E-37 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Patl_3034 da86d8d6d9a668c899c5322095875670 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 270 285 1.9E-37 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Patl_3034 da86d8d6d9a668c899c5322095875670 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 300 321 1.9E-37 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Patl_3034 da86d8d6d9a668c899c5322095875670 374 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 206 224 1.9E-37 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Patl_0016 a58bf88ea36f681b2bafbdac9d545599 483 Pfam PF02386 Cation transport protein 40 477 1.3E-85 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Patl_0016 a58bf88ea36f681b2bafbdac9d545599 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 2.0E-112 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Patl_0016 a58bf88ea36f681b2bafbdac9d545599 483 PIRSF PIRSF006247 1 483 9.0E-175 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Patl_4090 c5d233a6b3c4f87a739822e6b529cf49 349 SUPERFAMILY SSF50182 116 181 1.93E-13 T 11-10-2018 IPR010920 LSM domain superfamily Patl_4090 c5d233a6b3c4f87a739822e6b529cf49 349 Gene3D G3DSA:2.30.30.60 131 180 4.6E-11 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Patl_4090 c5d233a6b3c4f87a739822e6b529cf49 349 Gene3D G3DSA:3.30.70.100 184 277 1.9E-19 T 11-10-2018 Patl_4090 c5d233a6b3c4f87a739822e6b529cf49 349 SUPERFAMILY SSF82861 28 114 3.01E-14 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Patl_4090 c5d233a6b3c4f87a739822e6b529cf49 349 SUPERFAMILY SSF82689 184 281 9.02E-24 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Patl_4090 c5d233a6b3c4f87a739822e6b529cf49 349 Pfam PF00924 Mechanosensitive ion channel 71 269 2.2E-42 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Patl_0750 1325a2e4c80175ebba2874c22e37f742 187 Gene3D G3DSA:3.40.50.300 2 167 2.4E-45 T 11-10-2018 Patl_0750 1325a2e4c80175ebba2874c22e37f742 187 SUPERFAMILY SSF52540 3 171 2.5E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0750 1325a2e4c80175ebba2874c22e37f742 187 Pfam PF13521 AAA domain 4 162 3.2E-36 T 11-10-2018 IPR038727 NadR/Ttd14, AAA domain Patl_2169 cca9cba8b8aadca7e68a97582be4ced8 100 SUPERFAMILY SSF141371 2 99 6.47E-11 T 11-10-2018 Patl_2169 cca9cba8b8aadca7e68a97582be4ced8 100 Gene3D G3DSA:2.40.10.220 3 100 2.0E-11 T 11-10-2018 Patl_2169 cca9cba8b8aadca7e68a97582be4ced8 100 Pfam PF07238 PilZ domain 7 99 1.9E-14 T 11-10-2018 IPR009875 PilZ domain GO:0035438 Patl_1341 e822f43d224a3711e268d438e39f5e46 718 Gene3D G3DSA:3.40.630.30 381 582 5.5E-57 T 11-10-2018 Patl_1341 e822f43d224a3711e268d438e39f5e46 718 Pfam PF05127 Helicase 206 364 5.8E-50 T 11-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 Patl_1341 e822f43d224a3711e268d438e39f5e46 718 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 718 45.89 T 11-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 Patl_1341 e822f43d224a3711e268d438e39f5e46 718 Pfam PF13718 GNAT acetyltransferase 2 538 585 1.2E-5 T 11-10-2018 IPR000182 GNAT domain Patl_1341 e822f43d224a3711e268d438e39f5e46 718 Pfam PF13718 GNAT acetyltransferase 2 418 533 1.2E-19 T 11-10-2018 IPR000182 GNAT domain Patl_1341 e822f43d224a3711e268d438e39f5e46 718 Pfam PF08351 Domain of unknown function (DUF1726) 71 158 1.4E-8 T 11-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 Patl_1341 e822f43d224a3711e268d438e39f5e46 718 Gene3D G3DSA:3.40.50.11040 6 196 3.9E-41 T 11-10-2018 Patl_1341 e822f43d224a3711e268d438e39f5e46 718 SUPERFAMILY SSF52540 130 310 4.03E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1341 e822f43d224a3711e268d438e39f5e46 718 Gene3D G3DSA:3.40.50.12320 204 355 2.5E-44 T 11-10-2018 Patl_1341 e822f43d224a3711e268d438e39f5e46 718 SUPERFAMILY SSF55729 428 564 2.24E-10 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_0101 4ebd69ab43ff367733b6035a5d92d541 142 Pfam PF02566 OsmC-like protein 44 139 5.8E-18 T 11-10-2018 IPR003718 OsmC/Ohr family Patl_0101 4ebd69ab43ff367733b6035a5d92d541 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 9 141 4.2E-55 T 11-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 Patl_0101 4ebd69ab43ff367733b6035a5d92d541 142 SUPERFAMILY SSF82784 8 141 2.09E-43 T 11-10-2018 IPR036102 OsmC/Ohr superfamily Patl_0101 4ebd69ab43ff367733b6035a5d92d541 142 Gene3D G3DSA:3.30.300.20 49 142 5.2E-33 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Patl_0101 4ebd69ab43ff367733b6035a5d92d541 142 Gene3D G3DSA:2.20.25.10 1 48 3.8E-22 T 11-10-2018 Patl_1620 b5f18902509da6d3b0a30d0739c09479 239 Pfam PF01144 Coenzyme A transferase 10 218 5.4E-71 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Patl_1620 b5f18902509da6d3b0a30d0739c09479 239 SMART SM00882 8 219 2.0E-85 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 Patl_1620 b5f18902509da6d3b0a30d0739c09479 239 SUPERFAMILY SSF100950 5 226 1.78E-84 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Patl_1620 b5f18902509da6d3b0a30d0739c09479 239 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 5 217 1.1E-72 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 Patl_1620 b5f18902509da6d3b0a30d0739c09479 239 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 11-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 Patl_1620 b5f18902509da6d3b0a30d0739c09479 239 Gene3D G3DSA:3.40.1080.10 2 228 2.0E-94 T 11-10-2018 Patl_2220 69685558966b5aa054f0ae2267638d64 233 Gene3D G3DSA:3.30.110.170 36 230 3.8E-48 T 11-10-2018 Patl_2220 69685558966b5aa054f0ae2267638d64 233 Pfam PF04402 Protein of unknown function (DUF541) 34 229 4.3E-41 T 11-10-2018 IPR007497 Protein of unknown function DUF541 Patl_2220 69685558966b5aa054f0ae2267638d64 233 Gene3D G3DSA:3.30.70.2970 46 152 3.8E-48 T 11-10-2018 Patl_4057 187470a297b103c01a887e5249cb454c 414 SUPERFAMILY SSF50182 192 259 2.94E-11 T 11-10-2018 IPR010920 LSM domain superfamily Patl_4057 187470a297b103c01a887e5249cb454c 414 Pfam PF00924 Mechanosensitive ion channel 153 403 5.5E-45 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Patl_3659 f35c93d9c860144a6ac0002e2c81a6c4 754 Pfam PF14592 Chondroitinase B 33 431 1.7E-126 T 11-10-2018 IPR039513 PL-6 family Patl_3659 f35c93d9c860144a6ac0002e2c81a6c4 754 SUPERFAMILY SSF51126 477 734 1.04E-36 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor Patl_3659 f35c93d9c860144a6ac0002e2c81a6c4 754 SMART SM00710 248 269 4000.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Patl_3659 f35c93d9c860144a6ac0002e2c81a6c4 754 SMART SM00710 632 653 3000.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Patl_3659 f35c93d9c860144a6ac0002e2c81a6c4 754 SMART SM00710 663 692 4000.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Patl_3659 f35c93d9c860144a6ac0002e2c81a6c4 754 SMART SM00710 364 387 1700.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Patl_3659 f35c93d9c860144a6ac0002e2c81a6c4 754 SMART SM00710 300 321 8100.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Patl_3659 f35c93d9c860144a6ac0002e2c81a6c4 754 SMART SM00710 270 295 170.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Patl_3659 f35c93d9c860144a6ac0002e2c81a6c4 754 SMART SM00710 334 354 4700.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Patl_3659 f35c93d9c860144a6ac0002e2c81a6c4 754 SMART SM00710 158 180 7400.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Patl_3659 f35c93d9c860144a6ac0002e2c81a6c4 754 Gene3D G3DSA:2.160.20.10 31 469 1.4E-132 T 11-10-2018 IPR012334 Pectin lyase fold Patl_3659 f35c93d9c860144a6ac0002e2c81a6c4 754 Gene3D G3DSA:2.160.20.10 476 733 3.6E-12 T 11-10-2018 IPR012334 Pectin lyase fold Patl_3659 f35c93d9c860144a6ac0002e2c81a6c4 754 SUPERFAMILY SSF51126 31 475 1.57E-107 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor Patl_3917 13cd5bb3915975eff2281f9ad63760e4 272 Pfam PF00753 Metallo-beta-lactamase superfamily 28 213 4.1E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_3917 13cd5bb3915975eff2281f9ad63760e4 272 SUPERFAMILY SSF56281 16 239 7.65E-34 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_3917 13cd5bb3915975eff2281f9ad63760e4 272 Gene3D G3DSA:3.60.15.10 17 249 9.2E-30 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_3917 13cd5bb3915975eff2281f9ad63760e4 272 SMART SM00849 28 227 6.9E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 Gene3D G3DSA:3.40.50.880 157 380 8.5E-74 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 SMART SM01097 3 133 2.5E-89 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 PRINTS PR00097 Anthranilate synthase component II signature 352 365 1.2E-5 T 11-10-2018 Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 PRINTS PR00097 Anthranilate synthase component II signature 239 248 1.2E-5 T 11-10-2018 Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 PRINTS PR00097 Anthranilate synthase component II signature 267 278 1.2E-5 T 11-10-2018 Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 2.0E-52 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 SUPERFAMILY SSF52021 4 142 4.84E-57 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 309 320 5.8E-41 T 11-10-2018 Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 267 283 5.8E-41 T 11-10-2018 Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 284 301 5.8E-41 T 11-10-2018 Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 236 250 5.8E-41 T 11-10-2018 Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 197 211 5.8E-41 T 11-10-2018 Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 Pfam PF00117 Glutamine amidotransferase class-I 200 375 8.5E-49 T 11-10-2018 IPR017926 Glutamine amidotransferase Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 239 248 3.5E-11 T 11-10-2018 Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 352 365 3.5E-11 T 11-10-2018 Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 267 278 3.5E-11 T 11-10-2018 Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 SUPERFAMILY SSF52317 158 378 1.53E-63 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 381 48.866 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 Gene3D G3DSA:3.50.30.20 2 155 6.4E-58 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_2215 5b26f191fce3aa7269a4ad3a88e50853 381 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 378 1.4E-148 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Patl_1963 0cc9597f6212d4397dd01e5576389cad 245 Pfam PF07277 SapC 7 238 3.0E-63 T 11-10-2018 IPR010836 SapC Patl_0470 8bb33450ddd5198ccc61752d02fa41e4 201 Gene3D G3DSA:3.40.1370.10 1 201 1.7E-68 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Patl_0470 8bb33450ddd5198ccc61752d02fa41e4 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 33.622 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0470 8bb33450ddd5198ccc61752d02fa41e4 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 2.1E-63 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Patl_0470 8bb33450ddd5198ccc61752d02fa41e4 201 SUPERFAMILY SSF52166 10 200 2.22E-71 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Patl_0470 8bb33450ddd5198ccc61752d02fa41e4 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 2.7E-74 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2312 479389417135b1fa941a0554e345ca1d 302 SUPERFAMILY SSF46785 3 112 7.32E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2312 479389417135b1fa941a0554e345ca1d 302 SUPERFAMILY SSF53850 89 292 2.35E-31 T 11-10-2018 Patl_2312 479389417135b1fa941a0554e345ca1d 302 Gene3D G3DSA:3.40.190.290 91 292 1.4E-48 T 11-10-2018 Patl_2312 479389417135b1fa941a0554e345ca1d 302 Gene3D G3DSA:1.10.10.10 2 89 9.6E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2312 479389417135b1fa941a0554e345ca1d 302 Pfam PF03466 LysR substrate binding domain 89 288 9.0E-34 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_2312 479389417135b1fa941a0554e345ca1d 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.6E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1566 10f11d218a635fb202208680d9055cff 870 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1566 10f11d218a635fb202208680d9055cff 870 SUPERFAMILY SSF47323 669 869 1.25E-34 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1566 10f11d218a635fb202208680d9055cff 870 SUPERFAMILY SSF50677 227 421 4.32E-54 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Patl_1566 10f11d218a635fb202208680d9055cff 870 Gene3D G3DSA:3.90.740.10 228 420 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Patl_1566 10f11d218a635fb202208680d9055cff 870 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 5 869 23.671 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Patl_1566 10f11d218a635fb202208680d9055cff 870 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 869 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Patl_1566 10f11d218a635fb202208680d9055cff 870 PRINTS PR00985 Leucyl-tRNA synthetase signature 128 145 4.8E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Patl_1566 10f11d218a635fb202208680d9055cff 870 PRINTS PR00985 Leucyl-tRNA synthetase signature 530 552 4.8E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Patl_1566 10f11d218a635fb202208680d9055cff 870 PRINTS PR00985 Leucyl-tRNA synthetase signature 563 573 4.8E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Patl_1566 10f11d218a635fb202208680d9055cff 870 PRINTS PR00985 Leucyl-tRNA synthetase signature 216 235 4.8E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Patl_1566 10f11d218a635fb202208680d9055cff 870 PRINTS PR00985 Leucyl-tRNA synthetase signature 186 199 4.8E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Patl_1566 10f11d218a635fb202208680d9055cff 870 PRINTS PR00985 Leucyl-tRNA synthetase signature 154 170 4.8E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Patl_1566 10f11d218a635fb202208680d9055cff 870 PRINTS PR00985 Leucyl-tRNA synthetase signature 491 509 4.8E-51 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Patl_1566 10f11d218a635fb202208680d9055cff 870 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 625 661 7.1E-6 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1566 10f11d218a635fb202208680d9055cff 870 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 423 578 2.4E-8 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1566 10f11d218a635fb202208680d9055cff 870 Gene3D G3DSA:1.10.730.10 9 801 0.0 T 11-10-2018 Patl_1566 10f11d218a635fb202208680d9055cff 870 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 222 410 1.6E-76 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Patl_1566 10f11d218a635fb202208680d9055cff 870 Gene3D G3DSA:3.10.330.110 573 635 0.0 T 11-10-2018 Patl_1566 10f11d218a635fb202208680d9055cff 870 Pfam PF08264 Anticodon-binding domain of tRNA 710 831 4.4E-17 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Patl_1566 10f11d218a635fb202208680d9055cff 870 Pfam PF09334 tRNA synthetases class I (M) 40 172 3.3E-20 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1566 10f11d218a635fb202208680d9055cff 870 Gene3D G3DSA:3.40.50.620 34 572 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_1566 10f11d218a635fb202208680d9055cff 870 SUPERFAMILY SSF52374 6 675 1.11E-143 T 11-10-2018 Patl_1566 10f11d218a635fb202208680d9055cff 870 Gene3D G3DSA:3.10.20.590 809 869 4.8E-23 T 11-10-2018 Patl_2506 474c93dce4ac819f6110ee6ab3d89dbd 450 SUPERFAMILY SSF56935 101 450 1.08E-9 T 11-10-2018 Patl_2506 474c93dce4ac819f6110ee6ab3d89dbd 450 Pfam PF07396 Phosphate-selective porin O and P 107 248 7.3E-6 T 11-10-2018 IPR010870 Phosphate-selective porin O/P Patl_1185 f1bfdc528d93395b3eb69868510e4f57 352 Pfam PF01757 Acyltransferase family 6 325 1.2E-16 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Patl_3416 052599e5b1bf2cc7b8731be6dbf37b81 250 SUPERFAMILY SSF53448 7 249 3.47E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3416 052599e5b1bf2cc7b8731be6dbf37b81 250 Gene3D G3DSA:3.90.550.10 7 249 1.0E-53 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3416 052599e5b1bf2cc7b8731be6dbf37b81 250 Pfam PF00483 Nucleotidyl transferase 8 249 1.2E-23 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Patl_3076 807186b2ccc95fc4671bb9c2bf66f617 355 Pfam PF08666 SAF domain 298 355 6.8E-11 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Patl_3076 807186b2ccc95fc4671bb9c2bf66f617 355 Gene3D G3DSA:3.90.1210.10 288 354 2.5E-20 T 11-10-2018 Patl_3076 807186b2ccc95fc4671bb9c2bf66f617 355 Pfam PF03102 NeuB family 42 283 4.5E-89 T 11-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 Patl_3076 807186b2ccc95fc4671bb9c2bf66f617 355 SMART SM00858 297 355 5.9E-10 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Patl_3076 807186b2ccc95fc4671bb9c2bf66f617 355 SUPERFAMILY SSF51569 9 309 4.03E-87 T 11-10-2018 Patl_3076 807186b2ccc95fc4671bb9c2bf66f617 355 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 21 349 1.7E-155 T 11-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 Patl_3076 807186b2ccc95fc4671bb9c2bf66f617 355 SUPERFAMILY SSF51269 293 354 1.83E-17 T 11-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 Patl_3076 807186b2ccc95fc4671bb9c2bf66f617 355 Gene3D G3DSA:3.20.20.70 8 283 1.2E-89 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_0343 b90b922bb738b4953f8528a5400a3248 159 Gene3D G3DSA:3.40.630.30 14 151 1.0E-16 T 11-10-2018 Patl_0343 b90b922bb738b4953f8528a5400a3248 159 Pfam PF13673 Acetyltransferase (GNAT) domain 45 140 1.1E-8 T 11-10-2018 IPR000182 GNAT domain Patl_0343 b90b922bb738b4953f8528a5400a3248 159 SUPERFAMILY SSF55729 1 143 3.31E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_3654 23c7792910e5ec1bc954567db4218fd3 461 SUPERFAMILY SSF52467 286 460 1.83E-65 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Patl_3654 23c7792910e5ec1bc954567db4218fd3 461 Gene3D G3DSA:3.40.50.1220 277 461 2.8E-79 T 11-10-2018 Patl_3654 23c7792910e5ec1bc954567db4218fd3 461 PIRSF PIRSF000204 4 461 7.7E-172 T 11-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 Patl_3654 23c7792910e5ec1bc954567db4218fd3 461 Pfam PF02233 NAD(P) transhydrogenase beta subunit 10 457 2.9E-179 T 11-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Patl_4210 cd6529586f299ededd6a36475d9247a3 213 Gene3D G3DSA:3.30.1050.10 49 127 1.2E-5 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Patl_4210 cd6529586f299ededd6a36475d9247a3 213 SUPERFAMILY SSF55718 9 127 1.8E-9 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Patl_4210 cd6529586f299ededd6a36475d9247a3 213 Pfam PF02036 SCP-2 sterol transfer family 15 120 4.6E-26 T 11-10-2018 IPR003033 SCP2 sterol-binding domain Patl_3074 8dae95c980cba863737a47fbc8397d15 201 Gene3D G3DSA:3.40.630.30 3 151 2.7E-23 T 11-10-2018 Patl_3074 8dae95c980cba863737a47fbc8397d15 201 TIGRFAM TIGR03585 PseH: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 8 166 2.1E-61 T 11-10-2018 IPR020036 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase Patl_3074 8dae95c980cba863737a47fbc8397d15 201 SUPERFAMILY SSF55729 8 176 1.58E-12 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_3931 f666ac0603aa56d97025a14b27d87407 536 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 3 521 5.5E-276 T 11-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Patl_3931 f666ac0603aa56d97025a14b27d87407 536 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 61 437 2.9E-48 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Patl_3931 f666ac0603aa56d97025a14b27d87407 536 Gene3D G3DSA:3.90.1150.170 44 517 8.6E-103 T 11-10-2018 Patl_3931 f666ac0603aa56d97025a14b27d87407 536 SUPERFAMILY SSF53383 22 522 3.81E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_3931 f666ac0603aa56d97025a14b27d87407 536 Gene3D G3DSA:3.40.640.10 118 382 8.6E-103 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_2302 5468efe24c1160d7a1a05b747b17614b 450 SUPERFAMILY SSF55874 287 446 7.18E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2302 5468efe24c1160d7a1a05b747b17614b 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 297 4.7E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2302 5468efe24c1160d7a1a05b747b17614b 450 SUPERFAMILY SSF47384 218 298 3.92E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_2302 5468efe24c1160d7a1a05b747b17614b 450 Gene3D G3DSA:3.30.565.10 299 446 1.8E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2302 5468efe24c1160d7a1a05b747b17614b 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 447 3.7E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2302 5468efe24c1160d7a1a05b747b17614b 450 Gene3D G3DSA:1.10.287.130 183 298 2.2E-21 T 11-10-2018 Patl_2302 5468efe24c1160d7a1a05b747b17614b 450 SMART SM00387 338 448 9.6E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2302 5468efe24c1160d7a1a05b747b17614b 450 SMART SM00388 235 297 1.8E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2302 5468efe24c1160d7a1a05b747b17614b 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 403 8.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2302 5468efe24c1160d7a1a05b747b17614b 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 445 8.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2302 5468efe24c1160d7a1a05b747b17614b 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 8.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2302 5468efe24c1160d7a1a05b747b17614b 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 8.6E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3638 d079c2dfc200ba1568da66cb731daed8 993 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 56 993 3.3E-172 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor Patl_3638 d079c2dfc200ba1568da66cb731daed8 993 Pfam PF00593 TonB dependent receptor 475 991 1.4E-39 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3638 d079c2dfc200ba1568da66cb731daed8 993 SUPERFAMILY SSF56935 52 993 5.29E-81 T 11-10-2018 Patl_3638 d079c2dfc200ba1568da66cb731daed8 993 Gene3D G3DSA:2.170.130.10 65 179 5.0E-15 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_3638 d079c2dfc200ba1568da66cb731daed8 993 Pfam PF07715 TonB-dependent Receptor Plug Domain 81 176 8.3E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1290 52c44d399db29f36faee79158597e7b2 308 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 18 241 1.6E-110 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 Patl_1290 52c44d399db29f36faee79158597e7b2 308 Gene3D G3DSA:2.60.40.420 114 283 6.3E-57 T 11-10-2018 IPR008972 Cupredoxin Patl_1290 52c44d399db29f36faee79158597e7b2 308 SUPERFAMILY SSF81464 31 119 2.29E-22 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1290 52c44d399db29f36faee79158597e7b2 308 Gene3D G3DSA:1.10.287.90 30 113 3.8E-31 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1290 52c44d399db29f36faee79158597e7b2 308 Pfam PF06481 COX Aromatic Rich Motif 241 285 1.2E-19 T 11-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 Patl_1290 52c44d399db29f36faee79158597e7b2 308 SUPERFAMILY SSF49503 122 282 1.52E-47 T 11-10-2018 IPR008972 Cupredoxin Patl_1290 52c44d399db29f36faee79158597e7b2 308 PIRSF PIRSF000292 7 308 2.8E-130 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 Patl_3707 46800481b9e70261f2d60210f8e5c5fd 720 Pfam PF04607 Region found in RelA / SpoT proteins 239 348 1.1E-37 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 Patl_3707 46800481b9e70261f2d60210f8e5c5fd 720 Gene3D G3DSA:3.30.460.10 197 329 1.1E-49 T 11-10-2018 Patl_3707 46800481b9e70261f2d60210f8e5c5fd 720 SUPERFAMILY SSF55021 644 716 2.89E-9 T 11-10-2018 Patl_3707 46800481b9e70261f2d60210f8e5c5fd 720 SUPERFAMILY SSF109604 45 194 5.34E-43 T 11-10-2018 Patl_3707 46800481b9e70261f2d60210f8e5c5fd 720 Gene3D G3DSA:3.10.20.30 386 460 1.5E-30 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_3707 46800481b9e70261f2d60210f8e5c5fd 720 SUPERFAMILY SSF81301 184 396 1.42E-62 T 11-10-2018 Patl_3707 46800481b9e70261f2d60210f8e5c5fd 720 Pfam PF02824 TGS domain 392 451 2.9E-19 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Patl_3707 46800481b9e70261f2d60210f8e5c5fd 720 SMART SM00954 239 349 9.2E-65 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 Patl_3707 46800481b9e70261f2d60210f8e5c5fd 720 Gene3D G3DSA:3.30.70.260 639 720 5.6E-15 T 11-10-2018 Patl_3707 46800481b9e70261f2d60210f8e5c5fd 720 Gene3D G3DSA:1.10.3210.10 41 195 7.4E-40 T 11-10-2018 Patl_3707 46800481b9e70261f2d60210f8e5c5fd 720 SUPERFAMILY SSF81271 385 451 2.62E-21 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Patl_3707 46800481b9e70261f2d60210f8e5c5fd 720 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 50 716 4.6E-186 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 Patl_3707 46800481b9e70261f2d60210f8e5c5fd 720 Pfam PF13291 ACT domain 639 717 3.1E-17 T 11-10-2018 IPR002912 ACT domain Patl_3707 46800481b9e70261f2d60210f8e5c5fd 720 Pfam PF13328 HD domain 41 179 2.6E-41 T 11-10-2018 IPR003607 HD/PDEase domain Patl_3236 316a9bde6ac8f025e2668c22aca7d12d 711 Pfam PF00263 Bacterial type II and III secretion system protein 518 680 3.9E-45 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 Patl_3236 316a9bde6ac8f025e2668c22aca7d12d 711 Gene3D G3DSA:3.30.1370.120 106 269 6.2E-8 T 11-10-2018 IPR038591 NolW-like superfamily Patl_3236 316a9bde6ac8f025e2668c22aca7d12d 711 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 626 659 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 Patl_3236 316a9bde6ac8f025e2668c22aca7d12d 711 Gene3D G3DSA:3.30.1370.120 357 450 2.8E-5 T 11-10-2018 IPR038591 NolW-like superfamily Patl_3236 316a9bde6ac8f025e2668c22aca7d12d 711 PRINTS PR00811 Bacterial general secretion pathway protein D signature 451 461 6.0E-14 T 11-10-2018 IPR001775 GspD/PilQ family Patl_3236 316a9bde6ac8f025e2668c22aca7d12d 711 PRINTS PR00811 Bacterial general secretion pathway protein D signature 511 535 6.0E-14 T 11-10-2018 IPR001775 GspD/PilQ family Patl_3236 316a9bde6ac8f025e2668c22aca7d12d 711 PRINTS PR00811 Bacterial general secretion pathway protein D signature 546 556 6.0E-14 T 11-10-2018 IPR001775 GspD/PilQ family Patl_3236 316a9bde6ac8f025e2668c22aca7d12d 711 PRINTS PR00811 Bacterial general secretion pathway protein D signature 645 663 6.0E-14 T 11-10-2018 IPR001775 GspD/PilQ family Patl_3236 316a9bde6ac8f025e2668c22aca7d12d 711 PRINTS PR00811 Bacterial general secretion pathway protein D signature 668 682 6.0E-14 T 11-10-2018 IPR001775 GspD/PilQ family Patl_3080 07f6e349a34c5df3149a9376d56067d1 332 Pfam PF02719 Polysaccharide biosynthesis protein 7 280 1.5E-99 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Patl_3080 07f6e349a34c5df3149a9376d56067d1 332 Gene3D G3DSA:3.90.25.30 167 315 7.1E-129 T 11-10-2018 Patl_3080 07f6e349a34c5df3149a9376d56067d1 332 Gene3D G3DSA:3.40.50.720 4 311 7.1E-129 T 11-10-2018 Patl_3080 07f6e349a34c5df3149a9376d56067d1 332 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 327 6.4E-173 T 11-10-2018 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00520+4.2.1.115|MetaCyc: PWY-6143|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 Patl_3080 07f6e349a34c5df3149a9376d56067d1 332 SUPERFAMILY SSF51735 1 255 1.15E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0891 fdcdb6c727c61ba238efcdeb6ae5481d 565 ProSitePatterns PS00523 Sulfatases signature 1. 83 95 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_0891 fdcdb6c727c61ba238efcdeb6ae5481d 565 Gene3D G3DSA:3.40.720.10 37 560 1.0E-112 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_0891 fdcdb6c727c61ba238efcdeb6ae5481d 565 Pfam PF00884 Sulfatase 38 404 8.7E-56 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_0891 fdcdb6c727c61ba238efcdeb6ae5481d 565 SUPERFAMILY SSF53649 36 546 8.29E-113 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_0087 4b0bbb5811f0ca67ca336737aacbec23 199 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 187 4.5E-24 T 11-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 Patl_0087 4b0bbb5811f0ca67ca336737aacbec23 199 PIRSF PIRSF011489 1 197 5.7E-53 T 11-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 Patl_0595 e13573a498ca530a9631640848f0953c 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.367 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Patl_0595 e13573a498ca530a9631640848f0953c 233 SUPERFAMILY SSF56808 6 225 9.68E-81 T 11-10-2018 IPR023674 Ribosomal protein L1-like Patl_0595 e13573a498ca530a9631640848f0953c 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0595 e13573a498ca530a9631640848f0953c 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 7.5E-106 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Patl_0595 e13573a498ca530a9631640848f0953c 233 PIRSF PIRSF002155 1 227 3.8E-79 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0595 e13573a498ca530a9631640848f0953c 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 4.2E-54 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Patl_0595 e13573a498ca530a9631640848f0953c 233 Gene3D G3DSA:3.40.50.790 68 159 5.9E-81 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Patl_0595 e13573a498ca530a9631640848f0953c 233 Gene3D G3DSA:3.30.190.20 21 225 5.9E-81 T 11-10-2018 Patl_2414 b1a467034c0b62ec88aedcf202e5d759 410 Pfam PF13372 Alginate export 81 289 8.7E-11 T 11-10-2018 IPR025388 Alginate export domain Patl_2414 b1a467034c0b62ec88aedcf202e5d759 410 SUPERFAMILY SSF56935 53 305 7.02E-7 T 11-10-2018 Patl_4189 7267f187bd8b99d1cdc3700494040fef 725 SMART SM00487 191 387 2.3E-22 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_4189 7267f187bd8b99d1cdc3700494040fef 725 SMART SM00490 488 585 7.3E-10 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_4189 7267f187bd8b99d1cdc3700494040fef 725 SUPERFAMILY SSF52540 172 376 2.93E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4189 7267f187bd8b99d1cdc3700494040fef 725 SUPERFAMILY SSF52540 383 610 9.17E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4189 7267f187bd8b99d1cdc3700494040fef 725 Pfam PF00271 Helicase conserved C-terminal domain 500 584 1.1E-7 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_4189 7267f187bd8b99d1cdc3700494040fef 725 Pfam PF00270 DEAD/DEAH box helicase 199 359 7.8E-15 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Patl_4189 7267f187bd8b99d1cdc3700494040fef 725 Gene3D G3DSA:3.40.50.300 185 375 2.4E-74 T 11-10-2018 Patl_4189 7267f187bd8b99d1cdc3700494040fef 725 Gene3D G3DSA:1.10.8.630 2 108 1.4E-32 T 11-10-2018 Patl_4189 7267f187bd8b99d1cdc3700494040fef 725 TIGRFAM TIGR00595 priA: primosomal protein N' 217 721 3.3E-181 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Patl_4189 7267f187bd8b99d1cdc3700494040fef 725 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 724 23.548 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Patl_3465 fcc5116e508b40d4fcaeea62c5b0ea17 169 Gene3D G3DSA:1.10.10.10 8 57 4.2E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3465 fcc5116e508b40d4fcaeea62c5b0ea17 169 SMART SM00344 7 116 3.2E-17 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Patl_3465 fcc5116e508b40d4fcaeea62c5b0ea17 169 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Patl_3465 fcc5116e508b40d4fcaeea62c5b0ea17 169 Pfam PF13412 Winged helix-turn-helix DNA-binding 8 52 1.1E-11 T 11-10-2018 Patl_3465 fcc5116e508b40d4fcaeea62c5b0ea17 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 2.6E-6 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_3465 fcc5116e508b40d4fcaeea62c5b0ea17 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 2.6E-6 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_3465 fcc5116e508b40d4fcaeea62c5b0ea17 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 2.6E-6 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_3465 fcc5116e508b40d4fcaeea62c5b0ea17 169 SUPERFAMILY SSF54909 69 150 2.95E-10 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_3465 fcc5116e508b40d4fcaeea62c5b0ea17 169 Gene3D G3DSA:3.30.70.920 58 151 9.9E-14 T 11-10-2018 Patl_3465 fcc5116e508b40d4fcaeea62c5b0ea17 169 SUPERFAMILY SSF46785 6 65 3.88E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3465 fcc5116e508b40d4fcaeea62c5b0ea17 169 Pfam PF01037 Lrp/AsnC ligand binding domain 82 147 6.6E-9 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Patl_1755 bfae78f16e1ce479c9245c593513dba4 218 Pfam PF00578 AhpC/TSA family 45 192 1.5E-29 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_1755 bfae78f16e1ce479c9245c593513dba4 218 Gene3D G3DSA:3.40.30.10 26 217 1.4E-37 T 11-10-2018 Patl_1755 bfae78f16e1ce479c9245c593513dba4 218 SUPERFAMILY SSF52833 44 217 3.29E-31 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_0968 d9f60421327f4ac2419f61523355c6ca 487 Gene3D G3DSA:3.40.1380.20 348 481 1.3E-153 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Patl_0968 d9f60421327f4ac2419f61523355c6ca 487 Pfam PF02887 Pyruvate kinase, alpha/beta domain 369 484 7.7E-27 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Patl_0968 d9f60421327f4ac2419f61523355c6ca 487 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 12 486 6.7E-164 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Patl_0968 d9f60421327f4ac2419f61523355c6ca 487 Gene3D G3DSA:2.40.33.10 80 178 1.3E-153 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Patl_0968 d9f60421327f4ac2419f61523355c6ca 487 Gene3D G3DSA:3.20.20.60 12 347 1.3E-153 T 11-10-2018 Patl_0968 d9f60421327f4ac2419f61523355c6ca 487 PRINTS PR01050 Pyruvate kinase family signature 69 85 2.6E-52 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Patl_0968 d9f60421327f4ac2419f61523355c6ca 487 PRINTS PR01050 Pyruvate kinase family signature 281 305 2.6E-52 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Patl_0968 d9f60421327f4ac2419f61523355c6ca 487 PRINTS PR01050 Pyruvate kinase family signature 306 324 2.6E-52 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Patl_0968 d9f60421327f4ac2419f61523355c6ca 487 PRINTS PR01050 Pyruvate kinase family signature 256 280 2.6E-52 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Patl_0968 d9f60421327f4ac2419f61523355c6ca 487 PRINTS PR01050 Pyruvate kinase family signature 196 210 2.6E-52 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Patl_0968 d9f60421327f4ac2419f61523355c6ca 487 PRINTS PR01050 Pyruvate kinase family signature 229 255 2.6E-52 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Patl_0968 d9f60421327f4ac2419f61523355c6ca 487 PRINTS PR01050 Pyruvate kinase family signature 325 341 2.6E-52 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Patl_0968 d9f60421327f4ac2419f61523355c6ca 487 SUPERFAMILY SSF50800 80 174 5.58E-25 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Patl_0968 d9f60421327f4ac2419f61523355c6ca 487 SUPERFAMILY SSF52935 335 486 1.31E-36 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Patl_0968 d9f60421327f4ac2419f61523355c6ca 487 Pfam PF00224 Pyruvate kinase, barrel domain 12 350 1.1E-126 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Patl_0968 d9f60421327f4ac2419f61523355c6ca 487 SUPERFAMILY SSF51621 6 351 6.28E-89 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Patl_2146 8c0622bf435395668ebf1c5b4adbe6bd 271 Gene3D G3DSA:3.40.50.620 23 269 3.3E-87 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_2146 8c0622bf435395668ebf1c5b4adbe6bd 271 SMART SM00893 45 233 1.0E-68 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Patl_2146 8c0622bf435395668ebf1c5b4adbe6bd 271 Pfam PF01012 Electron transfer flavoprotein domain 53 228 1.2E-46 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Patl_2146 8c0622bf435395668ebf1c5b4adbe6bd 271 SUPERFAMILY SSF52402 23 266 1.74E-84 T 11-10-2018 Patl_2146 8c0622bf435395668ebf1c5b4adbe6bd 271 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 177 197 - T 11-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Patl_2146 8c0622bf435395668ebf1c5b4adbe6bd 271 PIRSF PIRSF000090 23 271 2.4E-82 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Patl_2564 4277b63ecc5fb725815d72624735fac4 423 Gene3D G3DSA:3.30.460.30 1 156 3.9E-55 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Patl_2564 4277b63ecc5fb725815d72624735fac4 423 SUPERFAMILY SSF51735 160 313 8.84E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2564 4277b63ecc5fb725815d72624735fac4 423 Gene3D G3DSA:3.40.50.720 159 311 1.5E-43 T 11-10-2018 Patl_2564 4277b63ecc5fb725815d72624735fac4 423 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 7 154 5.7E-49 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Patl_2564 4277b63ecc5fb725815d72624735fac4 423 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 2.2E-19 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Patl_2564 4277b63ecc5fb725815d72624735fac4 423 SUPERFAMILY SSF69742 1 156 3.27E-47 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Patl_2564 4277b63ecc5fb725815d72624735fac4 423 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 413 3.0E-136 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Patl_2564 4277b63ecc5fb725815d72624735fac4 423 SUPERFAMILY SSF69075 315 415 1.24E-21 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Patl_2564 4277b63ecc5fb725815d72624735fac4 423 PIRSF PIRSF000445 1 423 2.5E-151 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Patl_2564 4277b63ecc5fb725815d72624735fac4 423 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.237 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Patl_2564 4277b63ecc5fb725815d72624735fac4 423 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 11-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Patl_2564 4277b63ecc5fb725815d72624735fac4 423 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 169 304 2.2E-47 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 Gene3D G3DSA:1.25.40.10 509 672 2.1E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 SUPERFAMILY SSF48452 176 500 1.64E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 SUPERFAMILY SSF48452 602 767 3.29E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 Gene3D G3DSA:1.25.40.10 19 119 5.1E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 Gene3D G3DSA:1.25.40.10 120 416 6.7E-28 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 Gene3D G3DSA:1.25.40.10 690 914 3.9E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 Pfam PF14559 Tetratricopeptide repeat 478 538 1.6E-5 T 11-10-2018 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 Pfam PF14559 Tetratricopeptide repeat 36 91 2.9E-7 T 11-10-2018 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 Pfam PF13431 Tetratricopeptide repeat 792 824 3.0E-7 T 11-10-2018 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 9 887 1.8E-151 T 11-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 Gene3D G3DSA:1.25.40.10 417 508 2.0E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 Pfam PF13428 Tetratricopeptide repeat 196 239 5.6E-7 T 11-10-2018 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 SUPERFAMILY SSF48452 25 150 7.25E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 Pfam PF13432 Tetratricopeptide repeat 546 591 0.0029 T 11-10-2018 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 SMART SM00028 602 635 0.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 SMART SM00028 770 802 460.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 SMART SM00028 399 431 190.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 SMART SM00028 432 465 160.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 SMART SM00028 25 58 31.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 SMART SM00028 803 836 1.8E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 SMART SM00028 466 499 0.39 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 SMART SM00028 230 263 78.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 SMART SM00028 196 229 0.54 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 SMART SM00028 298 331 180.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 SMART SM00028 59 92 12.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0419 b56d74b1ac33c7b279a9646bef57440f 917 SUPERFAMILY SSF48452 414 865 2.61E-31 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3478 a10732f23667257c91bd9acd63ccd912 148 TIGRFAM TIGR00673 cynS: cyanase 6 148 1.5E-49 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 Patl_3478 a10732f23667257c91bd9acd63ccd912 148 SUPERFAMILY SSF55234 81 148 3.4E-28 T 11-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 Patl_3478 a10732f23667257c91bd9acd63ccd912 148 Hamap MF_00535 Cyanate hydratase [cynS]. 1 148 76.895 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 Patl_3478 a10732f23667257c91bd9acd63ccd912 148 Gene3D G3DSA:1.10.260.40 1 81 1.1E-28 T 11-10-2018 Patl_3478 a10732f23667257c91bd9acd63ccd912 148 PRINTS PR01693 Cyanase signature 102 118 4.7E-26 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 Patl_3478 a10732f23667257c91bd9acd63ccd912 148 PRINTS PR01693 Cyanase signature 84 98 4.7E-26 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 Patl_3478 a10732f23667257c91bd9acd63ccd912 148 PRINTS PR01693 Cyanase signature 15 30 4.7E-26 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 Patl_3478 a10732f23667257c91bd9acd63ccd912 148 PRINTS PR01693 Cyanase signature 133 143 4.7E-26 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 Patl_3478 a10732f23667257c91bd9acd63ccd912 148 PRINTS PR01693 Cyanase signature 35 52 4.7E-26 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 Patl_3478 a10732f23667257c91bd9acd63ccd912 148 Pfam PF02560 Cyanate lyase C-terminal domain 80 146 8.8E-35 T 11-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 Patl_3478 a10732f23667257c91bd9acd63ccd912 148 SUPERFAMILY SSF47413 2 76 1.73E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_3478 a10732f23667257c91bd9acd63ccd912 148 PIRSF PIRSF001263 1 148 4.2E-48 T 11-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 Patl_3478 a10732f23667257c91bd9acd63ccd912 148 Gene3D G3DSA:3.30.1160.10 82 148 3.8E-32 T 11-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 Patl_3478 a10732f23667257c91bd9acd63ccd912 148 SMART SM01116 76 148 2.0E-48 T 11-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 Patl_1164 b5155d999eedacb9000d1ae714c0e183 211 PIRSF PIRSF001467 21 206 7.1E-18 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Patl_1164 b5155d999eedacb9000d1ae714c0e183 211 SUPERFAMILY SSF50891 34 185 6.14E-32 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Patl_1164 b5155d999eedacb9000d1ae714c0e183 211 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 139 6.1E-10 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_1164 b5155d999eedacb9000d1ae714c0e183 211 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 77 89 6.1E-10 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_1164 b5155d999eedacb9000d1ae714c0e183 211 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 139 151 6.1E-10 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_1164 b5155d999eedacb9000d1ae714c0e183 211 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 66 6.1E-10 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_1164 b5155d999eedacb9000d1ae714c0e183 211 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 39 189 5.8E-30 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_1164 b5155d999eedacb9000d1ae714c0e183 211 Gene3D G3DSA:2.40.100.10 34 205 3.8E-38 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Patl_3697 ff92901b5498b29ee02a36d5b7c3b3d8 141 PIRSF PIRSF005276 1 141 3.5E-53 T 11-10-2018 IPR007481 Stringent starvation protein B Patl_3697 ff92901b5498b29ee02a36d5b7c3b3d8 141 SUPERFAMILY SSF101738 1 106 1.27E-44 T 11-10-2018 IPR036760 SspB-like superfamily Patl_3697 ff92901b5498b29ee02a36d5b7c3b3d8 141 Gene3D G3DSA:2.30.30.220 1 124 2.3E-48 T 11-10-2018 IPR036760 SspB-like superfamily Patl_3697 ff92901b5498b29ee02a36d5b7c3b3d8 141 Pfam PF04386 Stringent starvation protein B 4 141 6.0E-36 T 11-10-2018 IPR007481 Stringent starvation protein B Patl_3750 67aed2e81d08953b24ba90b3cfcbf0fd 388 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Patl_3750 67aed2e81d08953b24ba90b3cfcbf0fd 388 Gene3D G3DSA:3.40.50.1970 1 183 3.7E-54 T 11-10-2018 Patl_3750 67aed2e81d08953b24ba90b3cfcbf0fd 388 Gene3D G3DSA:1.20.1090.10 185 388 8.7E-60 T 11-10-2018 Patl_3750 67aed2e81d08953b24ba90b3cfcbf0fd 388 SUPERFAMILY SSF56796 5 386 8.11E-116 T 11-10-2018 Patl_3750 67aed2e81d08953b24ba90b3cfcbf0fd 388 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 377 6.9E-111 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Patl_0767 f008808fdcbd17f6cdc7f318399bc685 883 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 162 3.0E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0767 f008808fdcbd17f6cdc7f318399bc685 883 SUPERFAMILY SSF56935 36 882 7.69E-96 T 11-10-2018 Patl_0767 f008808fdcbd17f6cdc7f318399bc685 883 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 43 - T 11-10-2018 IPR010916 TonB box, conserved site Patl_0767 f008808fdcbd17f6cdc7f318399bc685 883 Gene3D G3DSA:2.170.130.10 27 170 3.4E-27 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_0767 f008808fdcbd17f6cdc7f318399bc685 883 Pfam PF00593 TonB dependent receptor 293 880 1.2E-31 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3328 1e53f4761062f8d9fe17fa92ff661a14 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 7.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3328 1e53f4761062f8d9fe17fa92ff661a14 391 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 7.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3328 1e53f4761062f8d9fe17fa92ff661a14 391 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 7.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3328 1e53f4761062f8d9fe17fa92ff661a14 391 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 7.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3328 1e53f4761062f8d9fe17fa92ff661a14 391 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 7.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3328 1e53f4761062f8d9fe17fa92ff661a14 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 7.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3328 1e53f4761062f8d9fe17fa92ff661a14 391 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 7.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3328 1e53f4761062f8d9fe17fa92ff661a14 391 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 7.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3328 1e53f4761062f8d9fe17fa92ff661a14 391 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 7.6E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3328 1e53f4761062f8d9fe17fa92ff661a14 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 388 39.084 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3328 1e53f4761062f8d9fe17fa92ff661a14 391 PIRSF PIRSF000724 1 390 2.2E-134 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3328 1e53f4761062f8d9fe17fa92ff661a14 391 SUPERFAMILY SSF53748 3 387 1.53E-147 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3328 1e53f4761062f8d9fe17fa92ff661a14 391 Gene3D G3DSA:3.40.50.1260 8 386 9.7E-154 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3328 1e53f4761062f8d9fe17fa92ff661a14 391 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3328 1e53f4761062f8d9fe17fa92ff661a14 391 Pfam PF00162 Phosphoglycerate kinase 6 378 2.4E-143 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3328 1e53f4761062f8d9fe17fa92ff661a14 391 Gene3D G3DSA:3.40.50.1260 165 378 9.7E-154 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3972 e00af5156c5a7cc55355eea4184c6a3a 397 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 194 205 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Patl_3972 e00af5156c5a7cc55355eea4184c6a3a 397 Pfam PF13484 4Fe-4S double cluster binding domain 193 257 1.7E-19 T 11-10-2018 Patl_3972 e00af5156c5a7cc55355eea4184c6a3a 397 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 15 349 1.8E-154 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 Patl_3972 e00af5156c5a7cc55355eea4184c6a3a 397 Pfam PF08331 Domain of unknown function (DUF1730) 63 141 4.3E-24 T 11-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 Patl_3972 e00af5156c5a7cc55355eea4184c6a3a 397 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 8 316 50.232 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 Patl_3972 e00af5156c5a7cc55355eea4184c6a3a 397 SUPERFAMILY SSF54862 171 319 1.51E-18 T 11-10-2018 Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 SMART SM00387 884 993 3.4E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 SUPERFAMILY SSF55785 600 728 2.86E-7 T 11-10-2018 IPR035965 PAS domain superfamily Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 SMART SM00091 609 676 0.0011 T 11-10-2018 IPR000014 PAS domain Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 Pfam PF00512 His Kinase A (phospho-acceptor) domain 775 840 2.9E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 Gene3D G3DSA:3.30.565.10 845 1001 1.8E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 SUPERFAMILY SSF47384 761 840 5.3E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 Pfam PF12860 PAS fold 615 734 9.1E-41 T 11-10-2018 Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 SUPERFAMILY SSF55874 831 991 5.11E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 Pfam PF00072 Response regulator receiver domain 1018 1131 2.4E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 SMART SM00448 1016 1131 1.0E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 SMART SM00388 775 840 1.1E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 PRINTS PR00344 Bacterial sensor protein C-terminal signature 953 971 1.5E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 PRINTS PR00344 Bacterial sensor protein C-terminal signature 977 990 1.5E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 PRINTS PR00344 Bacterial sensor protein C-terminal signature 920 934 1.5E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 PRINTS PR00344 Bacterial sensor protein C-terminal signature 938 948 1.5E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 SUPERFAMILY SSF52172 1014 1136 9.82E-22 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 Gene3D G3DSA:3.30.450.20 596 736 3.7E-11 T 11-10-2018 Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 Gene3D G3DSA:1.10.287.130 737 838 1.7E-12 T 11-10-2018 Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 885 990 1.1E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1985 86f1cf04e53163e0155a524ebcac2868 1138 Gene3D G3DSA:3.40.50.2300 1012 1138 1.9E-23 T 11-10-2018 Patl_1868 1cedbf441ef0c4c6c9f3dbe5d53979ce 385 Gene3D G3DSA:2.40.160.10 19 385 9.4E-19 T 11-10-2018 IPR023614 Porin domain superfamily Patl_1868 1cedbf441ef0c4c6c9f3dbe5d53979ce 385 SUPERFAMILY SSF56935 37 385 6.41E-32 T 11-10-2018 Patl_1868 1cedbf441ef0c4c6c9f3dbe5d53979ce 385 Pfam PF13609 Gram-negative porin 11 364 1.7E-27 T 11-10-2018 Patl_0134 31279c83a6f265f24a10ebab38be849c 353 Pfam PF00561 alpha/beta hydrolase fold 88 330 3.2E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_0134 31279c83a6f265f24a10ebab38be849c 353 PIRSF PIRSF005211 3 353 7.9E-101 T 11-10-2018 IPR012020 AB hydrolase 4 family Patl_0134 31279c83a6f265f24a10ebab38be849c 353 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 255 296 - T 11-10-2018 IPR000952 AB hydrolase 4, conserved site Patl_0134 31279c83a6f265f24a10ebab38be849c 353 SUPERFAMILY SSF53474 35 351 4.45E-36 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0045 2936c9c4b804171e6a95d619c1fa3469 417 Gene3D G3DSA:3.40.50.10300 187 416 4.1E-74 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Patl_0045 2936c9c4b804171e6a95d619c1fa3469 417 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 7 407 4.0E-143 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Patl_0045 2936c9c4b804171e6a95d619c1fa3469 417 Gene3D G3DSA:3.40.50.1950 3 186 6.8E-58 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Patl_0045 2936c9c4b804171e6a95d619c1fa3469 417 SUPERFAMILY SSF102645 187 412 3.14E-73 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Patl_0045 2936c9c4b804171e6a95d619c1fa3469 417 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 383 8.8E-69 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Patl_0045 2936c9c4b804171e6a95d619c1fa3469 417 SUPERFAMILY SSF52507 7 180 6.54E-60 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Patl_0045 2936c9c4b804171e6a95d619c1fa3469 417 Pfam PF02441 Flavoprotein 10 180 1.7E-45 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Patl_3400 0b3f8dbc76844eb2da950cf5c50c41cd 163 Pfam PF00075 RNase H 4 148 3.1E-10 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Patl_3400 0b3f8dbc76844eb2da950cf5c50c41cd 163 SUPERFAMILY SSF53098 2 157 4.93E-16 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_3400 0b3f8dbc76844eb2da950cf5c50c41cd 163 Gene3D G3DSA:3.30.420.10 1 162 6.5E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Patl_0537 6517a868b4245dcebf5a09407590555b 391 SUPERFAMILY SSF56219 22 388 1.44E-26 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Patl_0537 6517a868b4245dcebf5a09407590555b 391 Gene3D G3DSA:3.60.10.10 20 391 5.4E-22 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Patl_0537 6517a868b4245dcebf5a09407590555b 391 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 26 380 2.9E-24 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Patl_1825 145aa9e07963ab97437ac0a7d496dd64 509 ProSitePatterns PS00927 Trehalase signature 1. 121 134 - T 11-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 Patl_1825 145aa9e07963ab97437ac0a7d496dd64 509 ProSitePatterns PS00928 Trehalase signature 2. 422 431 - T 11-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 Patl_1825 145aa9e07963ab97437ac0a7d496dd64 509 Pfam PF01204 Trehalase 28 507 6.3E-140 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 Patl_1825 145aa9e07963ab97437ac0a7d496dd64 509 PRINTS PR00744 Glycosyl hydrolase family 37 signature 276 293 2.8E-42 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 Patl_1825 145aa9e07963ab97437ac0a7d496dd64 509 PRINTS PR00744 Glycosyl hydrolase family 37 signature 415 431 2.8E-42 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 Patl_1825 145aa9e07963ab97437ac0a7d496dd64 509 PRINTS PR00744 Glycosyl hydrolase family 37 signature 242 259 2.8E-42 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 Patl_1825 145aa9e07963ab97437ac0a7d496dd64 509 PRINTS PR00744 Glycosyl hydrolase family 37 signature 163 181 2.8E-42 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 Patl_1825 145aa9e07963ab97437ac0a7d496dd64 509 PRINTS PR00744 Glycosyl hydrolase family 37 signature 492 505 2.8E-42 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 Patl_1825 145aa9e07963ab97437ac0a7d496dd64 509 PRINTS PR00744 Glycosyl hydrolase family 37 signature 351 367 2.8E-42 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 Patl_1825 145aa9e07963ab97437ac0a7d496dd64 509 PRINTS PR00744 Glycosyl hydrolase family 37 signature 308 325 2.8E-42 T 11-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 Patl_1825 145aa9e07963ab97437ac0a7d496dd64 509 Gene3D G3DSA:1.50.10.10 5 509 1.0E-176 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Patl_1825 145aa9e07963ab97437ac0a7d496dd64 509 SUPERFAMILY SSF48208 11 505 6.38E-156 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Patl_0990 a5f55456a411fb42f2452e7be6135ab3 154 Gene3D G3DSA:3.40.1280.10 1 154 1.8E-66 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Patl_0990 a5f55456a411fb42f2452e7be6135ab3 154 SUPERFAMILY SSF75217 2 152 2.35E-45 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Patl_0990 a5f55456a411fb42f2452e7be6135ab3 154 PIRSF PIRSF029256 1 154 2.1E-67 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Patl_0990 a5f55456a411fb42f2452e7be6135ab3 154 Pfam PF00588 SpoU rRNA Methylase family 2 142 1.0E-33 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Patl_0990 a5f55456a411fb42f2452e7be6135ab3 154 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 4.3E-65 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Patl_0990 a5f55456a411fb42f2452e7be6135ab3 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 33.129 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Patl_0182 b42fcf0f69d2fbced906b8684f1ad0df 1537 Pfam PF00431 CUB domain 50 143 1.2E-15 T 11-10-2018 IPR000859 CUB domain Patl_0182 b42fcf0f69d2fbced906b8684f1ad0df 1537 SUPERFAMILY SSF49899 329 556 3.66E-27 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Patl_0182 b42fcf0f69d2fbced906b8684f1ad0df 1537 SUPERFAMILY SSF49854 51 146 3.01E-21 T 11-10-2018 IPR035914 Spermadhesin, CUB domain superfamily Patl_0182 b42fcf0f69d2fbced906b8684f1ad0df 1537 SUPERFAMILY SSF49899 569 799 4.06E-22 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Patl_0182 b42fcf0f69d2fbced906b8684f1ad0df 1537 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 403 554 4.3E-16 T 11-10-2018 Patl_0182 b42fcf0f69d2fbced906b8684f1ad0df 1537 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 637 793 5.0E-12 T 11-10-2018 Patl_0182 b42fcf0f69d2fbced906b8684f1ad0df 1537 Gene3D G3DSA:2.60.120.200 379 556 3.0E-23 T 11-10-2018 Patl_0182 b42fcf0f69d2fbced906b8684f1ad0df 1537 Gene3D G3DSA:2.60.120.290 41 151 9.7E-21 T 11-10-2018 IPR035914 Spermadhesin, CUB domain superfamily Patl_0182 b42fcf0f69d2fbced906b8684f1ad0df 1537 Gene3D G3DSA:2.60.120.200 627 798 1.7E-16 T 11-10-2018 Patl_0182 b42fcf0f69d2fbced906b8684f1ad0df 1537 SMART SM00042 37 147 3.6E-18 T 11-10-2018 IPR000859 CUB domain Patl_1787 2286d7852e0957b43609ba8cb07565c2 166 Pfam PF11143 Protein of unknown function (DUF2919) 6 150 3.7E-38 T 11-10-2018 IPR021318 Protein of unknown function DUF2919 Patl_3406 1faf40bd72a45ec792671c6325afc3a4 423 Gene3D G3DSA:3.40.640.10 1 285 2.1E-100 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_3406 1faf40bd72a45ec792671c6325afc3a4 423 PIRSF PIRSF001434 1 423 1.6E-126 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Patl_3406 1faf40bd72a45ec792671c6325afc3a4 423 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Patl_3406 1faf40bd72a45ec792671c6325afc3a4 423 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 5.4E-138 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Patl_3406 1faf40bd72a45ec792671c6325afc3a4 423 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 4.3E-194 T 11-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 Patl_3406 1faf40bd72a45ec792671c6325afc3a4 423 SUPERFAMILY SSF53383 1 420 1.48E-126 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_3406 1faf40bd72a45ec792671c6325afc3a4 423 Gene3D G3DSA:3.90.1150.10 289 423 2.2E-48 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_3360 420696b80bc85be787255995d196ce4b 785 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 353 506 1.6E-30 T 11-10-2018 IPR000160 GGDEF domain Patl_3360 420696b80bc85be787255995d196ce4b 785 Pfam PF00563 EAL domain 528 761 2.6E-67 T 11-10-2018 IPR001633 EAL domain Patl_3360 420696b80bc85be787255995d196ce4b 785 Gene3D G3DSA:3.30.70.270 352 524 1.8E-50 T 11-10-2018 Patl_3360 420696b80bc85be787255995d196ce4b 785 Gene3D G3DSA:3.20.20.450 525 774 6.5E-91 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3360 420696b80bc85be787255995d196ce4b 785 Pfam PF00990 Diguanylate cyclase, GGDEF domain 355 506 2.7E-38 T 11-10-2018 IPR000160 GGDEF domain Patl_3360 420696b80bc85be787255995d196ce4b 785 SMART SM00304 297 349 2.1E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_3360 420696b80bc85be787255995d196ce4b 785 SUPERFAMILY SSF141868 528 773 7.32E-83 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3360 420696b80bc85be787255995d196ce4b 785 SUPERFAMILY SSF55073 360 507 1.02E-38 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3360 420696b80bc85be787255995d196ce4b 785 SMART SM00052 522 767 5.6E-96 T 11-10-2018 IPR001633 EAL domain Patl_3360 420696b80bc85be787255995d196ce4b 785 SMART SM00267 344 512 2.6E-45 T 11-10-2018 IPR000160 GGDEF domain Patl_3360 420696b80bc85be787255995d196ce4b 785 Gene3D G3DSA:1.20.1480.50 269 351 5.4E-6 T 11-10-2018 Patl_3539 4857ced0a0484a3cd8db53af16f47697 219 Gene3D G3DSA:3.30.1150.10 123 218 3.5E-26 T 11-10-2018 Patl_3539 4857ced0a0484a3cd8db53af16f47697 219 SUPERFAMILY SSF74653 130 208 6.54E-24 T 11-10-2018 Patl_3539 4857ced0a0484a3cd8db53af16f47697 219 PRINTS PR01374 Gram-negative bacterial tonB protein signature 77 87 9.3E-18 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Patl_3539 4857ced0a0484a3cd8db53af16f47697 219 PRINTS PR01374 Gram-negative bacterial tonB protein signature 134 155 9.3E-18 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Patl_3539 4857ced0a0484a3cd8db53af16f47697 219 PRINTS PR01374 Gram-negative bacterial tonB protein signature 155 173 9.3E-18 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Patl_3539 4857ced0a0484a3cd8db53af16f47697 219 PRINTS PR01374 Gram-negative bacterial tonB protein signature 174 191 9.3E-18 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 Patl_3539 4857ced0a0484a3cd8db53af16f47697 219 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 139 217 3.7E-19 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 Patl_3539 4857ced0a0484a3cd8db53af16f47697 219 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 140 217 3.1E-17 T 11-10-2018 IPR006260 TonB/TolA, C-terminal Patl_0153 d82a447492fa52ea25fa18d03f380cd9 470 Gene3D G3DSA:3.40.605.10 19 462 8.8E-159 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_0153 d82a447492fa52ea25fa18d03f380cd9 470 SUPERFAMILY SSF53720 3 463 9.56E-148 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_0153 d82a447492fa52ea25fa18d03f380cd9 470 Gene3D G3DSA:3.40.309.10 247 435 8.8E-159 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Patl_0153 d82a447492fa52ea25fa18d03f380cd9 470 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 268 279 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Patl_0153 d82a447492fa52ea25fa18d03f380cd9 470 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 240 247 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Patl_0153 d82a447492fa52ea25fa18d03f380cd9 470 Pfam PF00171 Aldehyde dehydrogenase family 17 462 1.8E-147 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Patl_3312 f49bee3adad05c3d4bf2773074128332 303 Gene3D G3DSA:1.10.10.10 2 88 2.2E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3312 f49bee3adad05c3d4bf2773074128332 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.8E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3312 f49bee3adad05c3d4bf2773074128332 303 Gene3D G3DSA:3.40.190.10 94 292 2.8E-45 T 11-10-2018 Patl_3312 f49bee3adad05c3d4bf2773074128332 303 Pfam PF03466 LysR substrate binding domain 93 292 8.2E-30 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_3312 f49bee3adad05c3d4bf2773074128332 303 SUPERFAMILY SSF53850 92 294 1.75E-29 T 11-10-2018 Patl_3312 f49bee3adad05c3d4bf2773074128332 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3312 f49bee3adad05c3d4bf2773074128332 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3312 f49bee3adad05c3d4bf2773074128332 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.0E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3312 f49bee3adad05c3d4bf2773074128332 303 SUPERFAMILY SSF46785 5 87 9.31E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3312 f49bee3adad05c3d4bf2773074128332 303 Gene3D G3DSA:3.40.190.10 164 264 2.8E-45 T 11-10-2018 Patl_1366 12db6adb587ce93142187722a18886e3 533 SUPERFAMILY SSF55931 14 524 1.37E-192 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Patl_1366 12db6adb587ce93142187722a18886e3 533 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 533 211.446 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Patl_1366 12db6adb587ce93142187722a18886e3 533 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 13 526 6.5E-200 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Patl_1366 12db6adb587ce93142187722a18886e3 533 Pfam PF04262 Glutamate-cysteine ligase 16 390 6.2E-168 T 11-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 Patl_1366 12db6adb587ce93142187722a18886e3 533 Gene3D G3DSA:3.30.590.20 27 532 9.9E-187 T 11-10-2018 Patl_1133 900da4382a45515ba973d249765ceb28 349 Gene3D G3DSA:3.40.50.1980 87 205 5.5E-31 T 11-10-2018 Patl_1133 900da4382a45515ba973d249765ceb28 349 SUPERFAMILY SSF53807 89 334 7.46E-54 T 11-10-2018 Patl_1133 900da4382a45515ba973d249765ceb28 349 Gene3D G3DSA:3.40.50.1980 207 337 2.6E-23 T 11-10-2018 Patl_1133 900da4382a45515ba973d249765ceb28 349 Pfam PF01497 Periplasmic binding protein 90 310 2.0E-26 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain Patl_0283 e51838aac3b9f7891b0aaeaccf04b0ea 342 Gene3D G3DSA:2.40.50.100 67 222 2.5E-27 T 11-10-2018 Patl_0283 e51838aac3b9f7891b0aaeaccf04b0ea 342 Gene3D G3DSA:1.10.287.470 99 186 2.5E-27 T 11-10-2018 Patl_0283 e51838aac3b9f7891b0aaeaccf04b0ea 342 Pfam PF13533 Biotin-lipoyl like 68 116 3.0E-7 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Patl_0283 e51838aac3b9f7891b0aaeaccf04b0ea 342 Gene3D G3DSA:2.40.30.170 223 297 2.5E-27 T 11-10-2018 Patl_0283 e51838aac3b9f7891b0aaeaccf04b0ea 342 SUPERFAMILY SSF111369 65 209 5.23E-9 T 11-10-2018 Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 SUPERFAMILY SSF48029 132 343 5.62E-66 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 SUPERFAMILY SSF48029 19 133 1.83E-22 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 52 78 2.0E-56 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 132 155 2.0E-56 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 244 264 2.0E-56 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 23 39 2.0E-56 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 266 286 2.0E-56 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 213 238 2.0E-56 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 290 316 2.0E-56 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 PIRSF PIRSF003161 18 351 7.0E-114 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 19 349 1.1E-96 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 Gene3D G3DSA:1.10.220.30 19 101 6.0E-19 T 11-10-2018 Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 Pfam PF01706 FliG C-terminal domain 236 342 1.4E-39 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 Pfam PF14841 FliG middle domain 134 205 1.3E-25 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 Gene3D G3DSA:1.10.220.30 106 211 3.9E-28 T 11-10-2018 Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 Gene3D G3DSA:1.10.220.30 213 351 1.9E-43 T 11-10-2018 Patl_3046 07098a9f0ee9fe8b0cdd22ff37f8b066 351 Pfam PF14842 FliG N-terminal domain 22 123 1.4E-29 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Patl_0511 a09b530e661c98bacc453ed23cde4b5e 372 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 33 365 4.1E-47 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Patl_0511 a09b530e661c98bacc453ed23cde4b5e 372 SUPERFAMILY SSF53187 11 351 1.29E-36 T 11-10-2018 Patl_0511 a09b530e661c98bacc453ed23cde4b5e 372 Gene3D G3DSA:2.40.50.100 294 364 1.9E-138 T 11-10-2018 Patl_0511 a09b530e661c98bacc453ed23cde4b5e 372 Gene3D G3DSA:3.40.630.10 14 293 1.9E-138 T 11-10-2018 Patl_0285 4766c74a9de5ad51329ac644a93510d1 148 Pfam PF11391 Protein of unknown function (DUF2798) 85 145 1.7E-11 T 11-10-2018 IPR021529 Protein of unknown function DUF2798 Patl_0285 4766c74a9de5ad51329ac644a93510d1 148 Pfam PF11391 Protein of unknown function (DUF2798) 9 70 1.0E-17 T 11-10-2018 IPR021529 Protein of unknown function DUF2798 Patl_1840 9f7f77a61a3f8f47100a5eead810ab5d 880 Pfam PF00593 TonB dependent receptor 377 879 1.8E-33 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1840 9f7f77a61a3f8f47100a5eead810ab5d 880 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 163 8.6E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1840 9f7f77a61a3f8f47100a5eead810ab5d 880 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 39 880 2.0E-191 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor Patl_1840 9f7f77a61a3f8f47100a5eead810ab5d 880 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 863 880 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site Patl_1840 9f7f77a61a3f8f47100a5eead810ab5d 880 SUPERFAMILY SSF56935 34 880 1.74E-81 T 11-10-2018 Patl_1840 9f7f77a61a3f8f47100a5eead810ab5d 880 Gene3D G3DSA:2.170.130.10 41 166 1.2E-15 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_2226 73984e3f0673cabc437aefc3cbbc4775 575 Pfam PF06172 Cupin superfamily (DUF985) 415 553 8.8E-41 T 11-10-2018 IPR009327 Cupin domain of unknown function DUF985 Patl_2226 73984e3f0673cabc437aefc3cbbc4775 575 Pfam PF06516 Purine nucleoside permease (NUP) 54 383 3.8E-113 T 11-10-2018 IPR009486 Purine nucleoside permease GO:0055085 Patl_2226 73984e3f0673cabc437aefc3cbbc4775 575 Gene3D G3DSA:2.60.120.10 406 575 7.7E-53 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_2226 73984e3f0673cabc437aefc3cbbc4775 575 SUPERFAMILY SSF51182 398 574 1.69E-54 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_2290 d7e8da5597bc76055398d4e778e81b3d 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 2.4E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2290 d7e8da5597bc76055398d4e778e81b3d 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 2.4E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2290 d7e8da5597bc76055398d4e778e81b3d 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 2.4E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2290 d7e8da5597bc76055398d4e778e81b3d 215 SUPERFAMILY SSF52172 9 141 5.55E-33 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2290 d7e8da5597bc76055398d4e778e81b3d 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2290 d7e8da5597bc76055398d4e778e81b3d 215 Pfam PF00072 Response regulator receiver domain 13 123 4.2E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2290 d7e8da5597bc76055398d4e778e81b3d 215 SUPERFAMILY SSF46894 142 213 8.5E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_2290 d7e8da5597bc76055398d4e778e81b3d 215 SMART SM00448 10 123 1.9E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2290 d7e8da5597bc76055398d4e778e81b3d 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 1.6E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2290 d7e8da5597bc76055398d4e778e81b3d 215 SMART SM00421 150 207 3.6E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2290 d7e8da5597bc76055398d4e778e81b3d 215 Gene3D G3DSA:3.40.50.12740 10 213 1.5E-61 T 11-10-2018 Patl_3851 7cfb4743cd7ef17298ad898aaf23a836 495 Pfam PF01928 CYTH domain 7 203 1.1E-28 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Patl_3851 7cfb4743cd7ef17298ad898aaf23a836 495 Gene3D G3DSA:2.40.320.10 3 206 4.3E-34 T 11-10-2018 Patl_3851 7cfb4743cd7ef17298ad898aaf23a836 495 SUPERFAMILY SSF55154 4 220 1.96E-44 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 Patl_3851 7cfb4743cd7ef17298ad898aaf23a836 495 SMART SM01118 6 209 2.7E-38 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Patl_4102 d68678b3979f612ede3bccac7b1e84e1 761 SUPERFAMILY SSF52540 156 585 2.14E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4102 d68678b3979f612ede3bccac7b1e84e1 761 Gene3D G3DSA:3.40.50.300 149 355 1.9E-31 T 11-10-2018 Patl_4102 d68678b3979f612ede3bccac7b1e84e1 761 Pfam PF13245 AAA domain 160 331 8.1E-18 T 11-10-2018 Patl_4102 d68678b3979f612ede3bccac7b1e84e1 761 Gene3D G3DSA:3.40.50.300 458 596 1.6E-12 T 11-10-2018 Patl_4102 d68678b3979f612ede3bccac7b1e84e1 761 Pfam PF13361 UvrD-like helicase C-terminal domain 534 581 2.7E-11 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Patl_2143 79444a82554853b877aa347aed2a1a21 102 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 25 88 3.9E-8 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Patl_2143 79444a82554853b877aa347aed2a1a21 102 Gene3D G3DSA:2.60.40.10 2 101 4.4E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2143 79444a82554853b877aa347aed2a1a21 102 SUPERFAMILY SSF81296 12 99 1.45E-15 T 11-10-2018 IPR014756 Immunoglobulin E-set Patl_3428 9e4199c3fdbddb755ac98eec6280473d 870 Gene3D G3DSA:1.25.40.310 1 161 1.6E-68 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Patl_3428 9e4199c3fdbddb755ac98eec6280473d 870 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.8E-64 T 11-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Patl_3428 9e4199c3fdbddb755ac98eec6280473d 870 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Patl_3428 9e4199c3fdbddb755ac98eec6280473d 870 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Patl_3428 9e4199c3fdbddb755ac98eec6280473d 870 Gene3D G3DSA:3.30.499.10 683 864 1.9E-63 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Patl_3428 9e4199c3fdbddb755ac98eec6280473d 870 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 6.7E-38 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_3428 9e4199c3fdbddb755ac98eec6280473d 870 SUPERFAMILY SSF53732 379 854 3.4E-144 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Patl_3428 9e4199c3fdbddb755ac98eec6280473d 870 PIRSF PIRSF036687 1 859 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Patl_3428 9e4199c3fdbddb755ac98eec6280473d 870 Pfam PF06434 Aconitate hydratase 2 N-terminus 169 382 3.1E-93 T 11-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Patl_3428 9e4199c3fdbddb755ac98eec6280473d 870 SUPERFAMILY SSF74778 2 160 2.75E-67 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 Patl_3428 9e4199c3fdbddb755ac98eec6280473d 870 Gene3D G3DSA:3.30.499.10 402 529 1.1E-148 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Patl_3428 9e4199c3fdbddb755ac98eec6280473d 870 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Patl_3428 9e4199c3fdbddb755ac98eec6280473d 870 SUPERFAMILY SSF52016 161 372 1.94E-66 T 11-10-2018 Patl_3428 9e4199c3fdbddb755ac98eec6280473d 870 Gene3D G3DSA:3.40.1060.10 385 681 1.1E-148 T 11-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Patl_3428 9e4199c3fdbddb755ac98eec6280473d 870 Gene3D G3DSA:3.20.19.10 162 361 2.8E-73 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Patl_4201 7862ba58dc84859123834570dec35e61 724 Pfam PF00120 Glutamine synthetase, catalytic domain 199 402 4.5E-21 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Patl_4201 7862ba58dc84859123834570dec35e61 724 Gene3D G3DSA:1.20.120.1560 585 724 1.7E-32 T 11-10-2018 Patl_4201 7862ba58dc84859123834570dec35e61 724 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 337 352 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Patl_4201 7862ba58dc84859123834570dec35e61 724 Gene3D G3DSA:3.30.590.10 198 420 5.5E-29 T 11-10-2018 Patl_4201 7862ba58dc84859123834570dec35e61 724 Pfam PF12437 Glutamine synthetase type III N terminal 29 191 1.4E-64 T 11-10-2018 IPR022147 Glutamine synthetase type III N-terminal GO:0004356 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Patl_4201 7862ba58dc84859123834570dec35e61 724 SUPERFAMILY SSF55931 214 605 4.71E-72 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Patl_4201 7862ba58dc84859123834570dec35e61 724 SMART SM01230 192 477 1.5E-47 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Patl_2646 7b9fd07b55d9bd51655f69ec57547bec 384 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 17 110 9.7E-21 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Patl_2646 7b9fd07b55d9bd51655f69ec57547bec 384 Gene3D G3DSA:3.30.390.10 15 372 3.2E-118 T 11-10-2018 IPR029017 Enolase-like, N-terminal Patl_2646 7b9fd07b55d9bd51655f69ec57547bec 384 SUPERFAMILY SSF54826 1 114 5.38E-32 T 11-10-2018 Patl_2646 7b9fd07b55d9bd51655f69ec57547bec 384 SMART SM00922 128 238 3.4E-5 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Patl_2646 7b9fd07b55d9bd51655f69ec57547bec 384 Pfam PF13378 Enolase C-terminal domain-like 133 359 3.8E-44 T 11-10-2018 IPR029065 Enolase C-terminal domain-like Patl_2646 7b9fd07b55d9bd51655f69ec57547bec 384 SUPERFAMILY SSF51604 98 363 5.76E-60 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Patl_2646 7b9fd07b55d9bd51655f69ec57547bec 384 Gene3D G3DSA:3.20.20.120 105 348 3.2E-118 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Patl_1649 597c19a047e7888394bd54c4793c7da7 262 Gene3D G3DSA:3.30.540.10 3 152 7.4E-48 T 11-10-2018 Patl_1649 597c19a047e7888394bd54c4793c7da7 262 Gene3D G3DSA:3.40.190.80 153 262 3.3E-34 T 11-10-2018 Patl_1649 597c19a047e7888394bd54c4793c7da7 262 SUPERFAMILY SSF56655 5 260 1.07E-69 T 11-10-2018 Patl_1649 597c19a047e7888394bd54c4793c7da7 262 Pfam PF00459 Inositol monophosphatase family 11 234 4.9E-46 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_1649 597c19a047e7888394bd54c4793c7da7 262 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 6 261 40.537 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 Patl_1649 597c19a047e7888394bd54c4793c7da7 262 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 7 261 7.5E-90 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 Patl_1649 597c19a047e7888394bd54c4793c7da7 262 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Patl_1649 597c19a047e7888394bd54c4793c7da7 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 2.5E-8 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_1649 597c19a047e7888394bd54c4793c7da7 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 2.5E-8 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_1649 597c19a047e7888394bd54c4793c7da7 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.5E-8 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_0570 d58092f46895a5bf4a19e427d14bef31 147 Gene3D G3DSA:3.40.930.10 1 147 1.5E-48 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Patl_0570 d58092f46895a5bf4a19e427d14bef31 147 SUPERFAMILY SSF55804 1 146 2.62E-36 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 Patl_0570 d58092f46895a5bf4a19e427d14bef31 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain Patl_0570 d58092f46895a5bf4a19e427d14bef31 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 146 3.1E-32 T 11-10-2018 IPR002178 PTS EIIA type-2 domain Patl_0570 d58092f46895a5bf4a19e427d14bef31 147 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 3 146 5.8E-44 T 11-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 Patl_3104 fce945d9afbe2948eb2e4a7c1b80d8aa 108 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 100 5.6E-19 T 11-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 Patl_3104 fce945d9afbe2948eb2e4a7c1b80d8aa 108 Pfam PF04316 Anti-sigma-28 factor, FlgM 46 97 1.6E-15 T 11-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal Patl_3104 fce945d9afbe2948eb2e4a7c1b80d8aa 108 SUPERFAMILY SSF101498 20 98 7.72E-14 T 11-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily Patl_3232 163c94a2bcdda82b08201de8b8d19998 545 Pfam PF00437 Type II/IV secretion system protein 173 437 3.9E-75 T 11-10-2018 IPR001482 Type II/IV secretion system protein Patl_3232 163c94a2bcdda82b08201de8b8d19998 545 SUPERFAMILY SSF160246 3 126 3.66E-6 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Patl_3232 163c94a2bcdda82b08201de8b8d19998 545 Gene3D G3DSA:3.40.50.300 271 544 2.6E-104 T 11-10-2018 Patl_3232 163c94a2bcdda82b08201de8b8d19998 545 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 365 379 - T 11-10-2018 IPR001482 Type II/IV secretion system protein Patl_3232 163c94a2bcdda82b08201de8b8d19998 545 SUPERFAMILY SSF52540 156 538 1.82E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3232 163c94a2bcdda82b08201de8b8d19998 545 SMART SM00382 298 419 0.0029 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3232 163c94a2bcdda82b08201de8b8d19998 545 Gene3D G3DSA:3.30.450.90 134 269 3.4E-43 T 11-10-2018 Patl_3507 267782c86b998f4fedbc548e8a6bf8dc 198 SUPERFAMILY SSF100950 7 195 6.84E-51 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Patl_3507 267782c86b998f4fedbc548e8a6bf8dc 198 PIRSF PIRSF006806 3 194 5.3E-35 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Patl_3507 267782c86b998f4fedbc548e8a6bf8dc 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 7 191 3.9E-51 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Patl_3507 267782c86b998f4fedbc548e8a6bf8dc 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 8 191 1.1E-39 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase Patl_3507 267782c86b998f4fedbc548e8a6bf8dc 198 Gene3D G3DSA:3.40.50.10420 1 197 1.4E-52 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily Patl_0481 595e0306a4515b619cf40df6b76f5473 498 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0481 595e0306a4515b619cf40df6b76f5473 498 PIRSF PIRSF038928 1 484 1.4E-203 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0481 595e0306a4515b619cf40df6b76f5473 498 SMART SM01060 8 395 2.1E-256 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0481 595e0306a4515b619cf40df6b76f5473 498 PRINTS PR00067 Catalase signature 21 44 2.8E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0481 595e0306a4515b619cf40df6b76f5473 498 PRINTS PR00067 Catalase signature 105 122 2.8E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0481 595e0306a4515b619cf40df6b76f5473 498 PRINTS PR00067 Catalase signature 321 347 2.8E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0481 595e0306a4515b619cf40df6b76f5473 498 PRINTS PR00067 Catalase signature 289 316 2.8E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0481 595e0306a4515b619cf40df6b76f5473 498 PRINTS PR00067 Catalase signature 124 142 2.8E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0481 595e0306a4515b619cf40df6b76f5473 498 PRINTS PR00067 Catalase signature 84 102 2.8E-65 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0481 595e0306a4515b619cf40df6b76f5473 498 Gene3D G3DSA:2.40.180.10 2 487 4.8E-202 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 Patl_0481 595e0306a4515b619cf40df6b76f5473 498 SUPERFAMILY SSF56634 3 478 7.33E-189 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0481 595e0306a4515b619cf40df6b76f5473 498 Pfam PF00199 Catalase 8 391 1.5E-173 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_0481 595e0306a4515b619cf40df6b76f5473 498 Pfam PF06628 Catalase-related immune-responsive 419 476 3.7E-17 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 Patl_2813 24c59abb7840db8d20400e1c82ad3189 396 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 315 391 1.1E-20 T 11-10-2018 IPR032388 Flagellar assembly protein T, C-terminal Patl_2813 24c59abb7840db8d20400e1c82ad3189 396 Pfam PF16539 Flagellar assembly protein T, middle domain 118 272 2.4E-42 T 11-10-2018 IPR032386 Flagellar assembly protein T, middle domain Patl_2813 24c59abb7840db8d20400e1c82ad3189 396 Gene3D G3DSA:3.40.50.10610 118 306 1.2E-51 T 11-10-2018 Patl_2813 24c59abb7840db8d20400e1c82ad3189 396 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 29 114 5.3E-13 T 11-10-2018 IPR032370 Flagellar assembly protein T, N-terminal Patl_2813 24c59abb7840db8d20400e1c82ad3189 396 Gene3D G3DSA:2.40.10.410 307 395 8.0E-13 T 11-10-2018 IPR038165 FlgT, C-terminal domain superfamily Patl_2813 24c59abb7840db8d20400e1c82ad3189 396 Gene3D G3DSA:3.30.1660.40 28 117 7.7E-7 T 11-10-2018 IPR038180 FlgT, N-terminal domain superfamily Patl_1532 5bf14e982ec080fcaa26db7863e64352 181 SUPERFAMILY SSF111126 1 178 9.68E-44 T 11-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily Patl_1532 5bf14e982ec080fcaa26db7863e64352 181 Pfam PF07700 Haem-NO-binding 2 161 2.7E-37 T 11-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 Patl_1532 5bf14e982ec080fcaa26db7863e64352 181 SMART SM00989 118 179 1.3E-9 T 11-10-2018 IPR004096 4-vinyl reductase, 4VR Patl_1532 5bf14e982ec080fcaa26db7863e64352 181 Gene3D G3DSA:3.90.1520.10 1 180 3.0E-59 T 11-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 Patl_4087 f86e0e0fbd6b6c6bb16690546bc3f4da 193 SUPERFAMILY SSF52833 23 184 2.96E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_4087 f86e0e0fbd6b6c6bb16690546bc3f4da 193 Pfam PF00578 AhpC/TSA family 26 156 8.7E-19 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_4087 f86e0e0fbd6b6c6bb16690546bc3f4da 193 Gene3D G3DSA:3.40.30.10 5 177 4.6E-23 T 11-10-2018 Patl_3548 158fc6303920da0765f5ab0d6209adb0 486 SUPERFAMILY SSF55874 329 484 1.96E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3548 158fc6303920da0765f5ab0d6209adb0 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 484 2.8E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3548 158fc6303920da0765f5ab0d6209adb0 486 Gene3D G3DSA:3.30.565.10 333 484 9.0E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3548 158fc6303920da0765f5ab0d6209adb0 486 SMART SM00387 374 486 6.4E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3548 158fc6303920da0765f5ab0d6209adb0 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 429 5.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3548 158fc6303920da0765f5ab0d6209adb0 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 483 5.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3548 158fc6303920da0765f5ab0d6209adb0 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 465 5.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3548 158fc6303920da0765f5ab0d6209adb0 486 SUPERFAMILY SSF47384 248 330 9.61E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_3548 158fc6303920da0765f5ab0d6209adb0 486 Gene3D G3DSA:1.10.287.130 240 332 1.3E-8 T 11-10-2018 Patl_1627 0998e417d400e983df7334017d627f7b 458 Gene3D G3DSA:3.60.120.10 1 454 5.5E-160 T 11-10-2018 IPR005801 ADC synthase GO:0009058 Patl_1627 0998e417d400e983df7334017d627f7b 458 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 96 446 2.6E-113 T 11-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 Patl_1627 0998e417d400e983df7334017d627f7b 458 Pfam PF00425 chorismate binding enzyme 191 445 6.6E-94 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Patl_1627 0998e417d400e983df7334017d627f7b 458 Pfam PF04715 Anthranilate synthase component I, N terminal region 4 143 6.5E-27 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Patl_1627 0998e417d400e983df7334017d627f7b 458 SUPERFAMILY SSF56322 5 453 1.23E-137 T 11-10-2018 IPR005801 ADC synthase GO:0009058 Patl_1627 0998e417d400e983df7334017d627f7b 458 PRINTS PR00095 Anthranilate synthase component I signature 293 306 1.6E-16 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Patl_1627 0998e417d400e983df7334017d627f7b 458 PRINTS PR00095 Anthranilate synthase component I signature 402 416 1.6E-16 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Patl_1627 0998e417d400e983df7334017d627f7b 458 PRINTS PR00095 Anthranilate synthase component I signature 387 401 1.6E-16 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Patl_1627 0998e417d400e983df7334017d627f7b 458 PRINTS PR00095 Anthranilate synthase component I signature 307 320 1.6E-16 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Patl_3736 2c5cab3c2830ce5383b120aaec851e48 397 Pfam PF01926 50S ribosome-binding GTPase 161 284 2.3E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_3736 2c5cab3c2830ce5383b120aaec851e48 397 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 3.5E-145 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Patl_3736 2c5cab3c2830ce5383b120aaec851e48 397 Pfam PF01018 GTP1/OBG 4 157 2.5E-56 T 11-10-2018 IPR006169 GTP1/OBG domain Patl_3736 2c5cab3c2830ce5383b120aaec851e48 397 Gene3D G3DSA:3.40.50.300 159 335 1.2E-51 T 11-10-2018 Patl_3736 2c5cab3c2830ce5383b120aaec851e48 397 SUPERFAMILY SSF52540 152 335 3.38E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3736 2c5cab3c2830ce5383b120aaec851e48 397 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 2.3E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_3736 2c5cab3c2830ce5383b120aaec851e48 397 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 2.3E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_3736 2c5cab3c2830ce5383b120aaec851e48 397 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.3E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_3736 2c5cab3c2830ce5383b120aaec851e48 397 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.3E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_3736 2c5cab3c2830ce5383b120aaec851e48 397 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 Patl_3736 2c5cab3c2830ce5383b120aaec851e48 397 PIRSF PIRSF002401 1 375 5.7E-138 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type Patl_3736 2c5cab3c2830ce5383b120aaec851e48 397 Gene3D G3DSA:2.70.210.12 1 158 1.5E-58 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily Patl_3736 2c5cab3c2830ce5383b120aaec851e48 397 SUPERFAMILY SSF82051 2 157 5.75E-54 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily Patl_3736 2c5cab3c2830ce5383b120aaec851e48 397 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.19 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Patl_0114 a71fe4bc92d23d03ff868cc6c1762c3f 294 Gene3D G3DSA:3.40.190.290 92 294 6.7E-40 T 11-10-2018 Patl_0114 a71fe4bc92d23d03ff868cc6c1762c3f 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 5.1E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0114 a71fe4bc92d23d03ff868cc6c1762c3f 294 SUPERFAMILY SSF53850 92 293 8.15E-40 T 11-10-2018 Patl_0114 a71fe4bc92d23d03ff868cc6c1762c3f 294 Gene3D G3DSA:1.10.10.10 1 90 2.0E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0114 a71fe4bc92d23d03ff868cc6c1762c3f 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.5E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0114 a71fe4bc92d23d03ff868cc6c1762c3f 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.5E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0114 a71fe4bc92d23d03ff868cc6c1762c3f 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.5E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0114 a71fe4bc92d23d03ff868cc6c1762c3f 294 SUPERFAMILY SSF46785 1 113 2.17E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0114 a71fe4bc92d23d03ff868cc6c1762c3f 294 Pfam PF03466 LysR substrate binding domain 90 291 6.2E-42 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_3985 baf0b903782463f328114afd9ff2ac7f 631 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 141 158 - T 11-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 Patl_3985 baf0b903782463f328114afd9ff2ac7f 631 Gene3D G3DSA:3.40.190.10 46 358 1.5E-79 T 11-10-2018 Patl_3985 baf0b903782463f328114afd9ff2ac7f 631 Gene3D G3DSA:3.40.190.10 146 389 1.5E-79 T 11-10-2018 Patl_3985 baf0b903782463f328114afd9ff2ac7f 631 SUPERFAMILY SSF53850 132 628 7.7E-6 T 11-10-2018 Patl_3985 baf0b903782463f328114afd9ff2ac7f 631 SUPERFAMILY SSF53850 24 376 2.06E-41 T 11-10-2018 Patl_3985 baf0b903782463f328114afd9ff2ac7f 631 Pfam PF01547 Bacterial extracellular solute-binding protein 79 328 1.2E-23 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 Gene3D G3DSA:1.10.420.10 606 729 6.8E-135 T 11-10-2018 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 Gene3D G3DSA:1.10.420.20 210 415 1.7E-203 T 11-10-2018 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 498 524 2.1E-42 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 72 85 2.1E-42 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 87 112 2.1E-42 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 282 305 2.1E-42 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 46 68 2.1E-42 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 Pfam PF00141 Peroxidase 96 413 1.4E-49 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 Pfam PF00141 Peroxidase 422 728 9.0E-31 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 SUPERFAMILY SSF48113 42 444 7.81E-145 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 SUPERFAMILY SSF48113 448 753 7.51E-103 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 274 284 - T 11-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 Gene3D G3DSA:1.10.520.10 451 753 6.8E-135 T 11-10-2018 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 Gene3D G3DSA:1.10.520.10 42 447 1.7E-203 T 11-10-2018 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 44 753 0.0 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 Hamap MF_01961 Catalase-peroxidase [katG]. 27 753 40.208 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 PRINTS PR00458 Haem peroxidase superfamily signature 110 124 2.1E-15 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 PRINTS PR00458 Haem peroxidase superfamily signature 188 200 2.1E-15 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 PRINTS PR00458 Haem peroxidase superfamily signature 170 187 2.1E-15 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 PRINTS PR00458 Haem peroxidase superfamily signature 659 674 2.1E-15 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Patl_1975 44e18eff9e2dfd1b9c5890374c108e97 753 PRINTS PR00458 Haem peroxidase superfamily signature 274 289 2.1E-15 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Patl_3129 6509c55eed4488f90a371ccebb61132f 380 Pfam PF04055 Radical SAM superfamily 115 284 7.1E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Patl_3129 6509c55eed4488f90a371ccebb61132f 380 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 7 363 1.4E-158 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Patl_3129 6509c55eed4488f90a371ccebb61132f 380 Gene3D G3DSA:1.10.150.530 1 72 1.9E-27 T 11-10-2018 Patl_3129 6509c55eed4488f90a371ccebb61132f 380 Gene3D G3DSA:3.20.20.70 73 344 3.4E-110 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_3129 6509c55eed4488f90a371ccebb61132f 380 PIRSF PIRSF006004 6 372 2.8E-144 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 Patl_3129 6509c55eed4488f90a371ccebb61132f 380 SUPERFAMILY SSF102114 111 328 3.14E-15 T 11-10-2018 Patl_3129 6509c55eed4488f90a371ccebb61132f 380 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 11 359 72.844 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Patl_3475 2490244e4f4f657a9521644b6fc06b4d 529 SMART SM00065 21 169 1.6E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_3475 2490244e4f4f657a9521644b6fc06b4d 529 Gene3D G3DSA:3.40.50.300 181 365 3.0E-63 T 11-10-2018 Patl_3475 2490244e4f4f657a9521644b6fc06b4d 529 Gene3D G3DSA:1.10.10.60 465 522 1.3E-10 T 11-10-2018 Patl_3475 2490244e4f4f657a9521644b6fc06b4d 529 SUPERFAMILY SSF55781 6 159 1.44E-17 T 11-10-2018 Patl_3475 2490244e4f4f657a9521644b6fc06b4d 529 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Patl_3475 2490244e4f4f657a9521644b6fc06b4d 529 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Patl_3475 2490244e4f4f657a9521644b6fc06b4d 529 Gene3D G3DSA:3.30.450.40 3 176 5.6E-15 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_3475 2490244e4f4f657a9521644b6fc06b4d 529 Pfam PF01590 GAF domain 23 153 2.6E-7 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_3475 2490244e4f4f657a9521644b6fc06b4d 529 Pfam PF00158 Sigma-54 interaction domain 194 360 8.2E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Patl_3475 2490244e4f4f657a9521644b6fc06b4d 529 SUPERFAMILY SSF52540 193 428 1.92E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3475 2490244e4f4f657a9521644b6fc06b4d 529 Gene3D G3DSA:1.10.8.60 366 446 7.4E-18 T 11-10-2018 Patl_3475 2490244e4f4f657a9521644b6fc06b4d 529 SUPERFAMILY SSF46689 470 517 2.15E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_3475 2490244e4f4f657a9521644b6fc06b4d 529 SMART SM00382 214 357 7.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1769 0ce4c352477b970c8e96bed6ad89aad4 464 Pfam PF00990 Diguanylate cyclase, GGDEF domain 306 456 4.8E-43 T 11-10-2018 IPR000160 GGDEF domain Patl_1769 0ce4c352477b970c8e96bed6ad89aad4 464 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 305 461 2.3E-45 T 11-10-2018 IPR000160 GGDEF domain Patl_1769 0ce4c352477b970c8e96bed6ad89aad4 464 SMART SM00267 293 461 2.4E-45 T 11-10-2018 IPR000160 GGDEF domain Patl_1769 0ce4c352477b970c8e96bed6ad89aad4 464 Gene3D G3DSA:3.30.70.270 302 464 2.7E-49 T 11-10-2018 Patl_1769 0ce4c352477b970c8e96bed6ad89aad4 464 SUPERFAMILY SSF55073 309 460 8.63E-42 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_0069 1f336da9e70b3dba486cba055ea33fc3 83 Pfam PF04380 Membrane fusogenic activity 1 78 2.4E-28 T 11-10-2018 IPR007475 Membrane fusogenic activity Patl_1479 f5d39c4b95ca49f1e6b636cdf2635d02 575 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Patl_1479 f5d39c4b95ca49f1e6b636cdf2635d02 575 SUPERFAMILY SSF51569 20 328 9.16E-98 T 11-10-2018 Patl_1479 f5d39c4b95ca49f1e6b636cdf2635d02 575 Pfam PF08502 LeuA allosteric (dimerisation) domain 422 549 1.1E-26 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Patl_1479 f5d39c4b95ca49f1e6b636cdf2635d02 575 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 5 550 3.5E-237 T 11-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Patl_1479 f5d39c4b95ca49f1e6b636cdf2635d02 575 Pfam PF00682 HMGL-like 32 311 3.5E-75 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Patl_1479 f5d39c4b95ca49f1e6b636cdf2635d02 575 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 3 552 51.979 T 11-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Patl_1479 f5d39c4b95ca49f1e6b636cdf2635d02 575 SUPERFAMILY SSF89000 386 435 9.81E-13 T 11-10-2018 Patl_1479 f5d39c4b95ca49f1e6b636cdf2635d02 575 SUPERFAMILY SSF110921 451 549 3.79E-28 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Patl_1479 f5d39c4b95ca49f1e6b636cdf2635d02 575 SMART SM00917 420 551 1.9E-26 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Patl_1479 f5d39c4b95ca49f1e6b636cdf2635d02 575 Gene3D G3DSA:3.20.20.70 9 374 2.6E-153 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_1479 f5d39c4b95ca49f1e6b636cdf2635d02 575 Gene3D G3DSA:3.30.160.270 375 550 2.4E-52 T 11-10-2018 Patl_1479 f5d39c4b95ca49f1e6b636cdf2635d02 575 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Patl_0257 5f81eee64ea005318d2cb9cb62991715 240 SUPERFAMILY SSF49503 61 147 4.57E-17 T 11-10-2018 IPR008972 Cupredoxin Patl_0257 5f81eee64ea005318d2cb9cb62991715 240 Gene3D G3DSA:2.60.40.420 48 147 2.0E-12 T 11-10-2018 IPR008972 Cupredoxin Patl_3214 e20f083f1ceb3848fa0c10585d0e5cbe 349 SUPERFAMILY SSF52540 86 341 4.25E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3214 e20f083f1ceb3848fa0c10585d0e5cbe 349 Gene3D G3DSA:3.40.50.300 76 333 2.7E-18 T 11-10-2018 Patl_3214 e20f083f1ceb3848fa0c10585d0e5cbe 349 Pfam PF13469 Sulfotransferase family 95 287 2.2E-14 T 11-10-2018 Patl_4255 eb27788992c541b63526402f379eea8f 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 6.5E-27 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Patl_4255 eb27788992c541b63526402f379eea8f 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 354 485 4.0E-20 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Patl_4255 eb27788992c541b63526402f379eea8f 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 8.9E-118 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Patl_4255 eb27788992c541b63526402f379eea8f 494 SUPERFAMILY SSF51735 27 209 3.57E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_4255 eb27788992c541b63526402f379eea8f 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.65 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Patl_4255 eb27788992c541b63526402f379eea8f 494 Gene3D G3DSA:1.10.1040.10 209 494 9.0E-114 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Patl_4255 eb27788992c541b63526402f379eea8f 494 SUPERFAMILY SSF48179 210 343 4.93E-39 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_4255 eb27788992c541b63526402f379eea8f 494 SUPERFAMILY SSF48179 349 487 1.11E-41 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_4255 eb27788992c541b63526402f379eea8f 494 Gene3D G3DSA:3.40.50.720 1 208 8.3E-82 T 11-10-2018 Patl_4255 eb27788992c541b63526402f379eea8f 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.9E-56 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Patl_2541 d08f4ff467a250352addc2ad59002c85 505 Pfam PF11840 Protein of unknown function (DUF3360) 24 500 7.1E-261 T 11-10-2018 IPR021794 Protein of unknown function DUF3360 Patl_3938 f5b0cc418c516884ed94bf9337fc677f 234 Gene3D G3DSA:3.40.1350.60 81 234 4.3E-61 T 11-10-2018 Patl_3938 f5b0cc418c516884ed94bf9337fc677f 234 Pfam PF03749 Sugar fermentation stimulation protein 13 225 1.1E-80 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein Patl_3938 f5b0cc418c516884ed94bf9337fc677f 234 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 233 6.0E-78 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein Patl_3938 f5b0cc418c516884ed94bf9337fc677f 234 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 61.176 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein Patl_3938 f5b0cc418c516884ed94bf9337fc677f 234 Gene3D G3DSA:2.40.50.580 1 80 1.9E-29 T 11-10-2018 Patl_2493 70e167c86aa584b7c5a4f02fadf29ee9 98 SUPERFAMILY SSF47729 3 95 1.77E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Patl_2493 70e167c86aa584b7c5a4f02fadf29ee9 98 SMART SM00411 3 92 3.5E-42 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Patl_2493 70e167c86aa584b7c5a4f02fadf29ee9 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.403 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 Patl_2493 70e167c86aa584b7c5a4f02fadf29ee9 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 96 1.4E-49 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 Patl_2493 70e167c86aa584b7c5a4f02fadf29ee9 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 2.8E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Patl_2493 70e167c86aa584b7c5a4f02fadf29ee9 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 2.8E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Patl_2493 70e167c86aa584b7c5a4f02fadf29ee9 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 2.8E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Patl_2493 70e167c86aa584b7c5a4f02fadf29ee9 98 Gene3D G3DSA:4.10.520.10 1 98 1.7E-38 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Patl_2493 70e167c86aa584b7c5a4f02fadf29ee9 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Patl_2493 70e167c86aa584b7c5a4f02fadf29ee9 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 9.0E-33 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Patl_1364 e5bc05b41f8dc08faeab318551820e9e 187 SUPERFAMILY SSF47226 4 112 2.49E-16 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Patl_1364 e5bc05b41f8dc08faeab318551820e9e 187 Gene3D G3DSA:1.20.120.160 5 117 5.9E-19 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 Patl_1364 e5bc05b41f8dc08faeab318551820e9e 187 Pfam PF01627 Hpt domain 28 96 1.1E-7 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Patl_2533 07fa5775a76a23b631ee9856523baed6 114 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 6 112 4.2E-35 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 Patl_2533 07fa5775a76a23b631ee9856523baed6 114 SUPERFAMILY SSF50022 6 113 5.08E-33 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Patl_2533 07fa5775a76a23b631ee9856523baed6 114 Gene3D G3DSA:2.102.10.10 1 114 2.2E-33 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Patl_2533 07fa5775a76a23b631ee9856523baed6 114 Pfam PF13806 Rieske-like [2Fe-2S] domain 6 111 1.7E-35 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 Patl_2622 887a92a1399faf6e57744274857a3759 228 SUPERFAMILY SSF46689 182 227 5.38E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_2622 887a92a1399faf6e57744274857a3759 228 SMART SM00342 145 227 1.8E-4 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_2622 887a92a1399faf6e57744274857a3759 228 Gene3D G3DSA:1.10.10.60 133 228 2.0E-18 T 11-10-2018 Patl_2622 887a92a1399faf6e57744274857a3759 228 Pfam PF12833 Helix-turn-helix domain 153 227 1.9E-15 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_3942 1ec87f956d5d18e567556d7274c15218 196 Gene3D G3DSA:1.20.1590.10 2 194 3.7E-71 T 11-10-2018 IPR023381 YP001051499.1-like domain superfamily Patl_3942 1ec87f956d5d18e567556d7274c15218 196 Pfam PF04222 Protein of unknown function (DUF416) 7 193 6.8E-74 T 11-10-2018 IPR007338 Protein of unknown function DUF416 Patl_0745 87d4e33ae559c0e2312556bb70a4f243 517 SUPERFAMILY SSF103473 8 507 8.5E-60 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_0745 87d4e33ae559c0e2312556bb70a4f243 517 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 504 2.3E-120 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Patl_0745 87d4e33ae559c0e2312556bb70a4f243 517 Gene3D G3DSA:1.20.1720.10 18 215 5.6E-38 T 11-10-2018 Patl_0745 87d4e33ae559c0e2312556bb70a4f243 517 Pfam PF07690 Major Facilitator Superfamily 21 415 6.5E-40 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_1340 a1b278173e1853d57f1d56a48fe87c80 274 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 53 75 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Patl_1340 a1b278173e1853d57f1d56a48fe87c80 274 Pfam PF01066 CDP-alcohol phosphatidyltransferase 12 75 2.0E-16 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Patl_1340 a1b278173e1853d57f1d56a48fe87c80 274 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 19 179 1.3E-36 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 Patl_1340 a1b278173e1853d57f1d56a48fe87c80 274 Gene3D G3DSA:1.20.120.1760 7 147 5.0E-17 T 11-10-2018 Patl_3330 f7b6a247094e90f2e0589b2b0bb1a032 666 SUPERFAMILY SSF52518 5 321 1.26E-121 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Patl_3330 f7b6a247094e90f2e0589b2b0bb1a032 666 Gene3D G3DSA:3.40.50.920 539 666 2.8E-43 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Patl_3330 f7b6a247094e90f2e0589b2b0bb1a032 666 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Patl_3330 f7b6a247094e90f2e0589b2b0bb1a032 666 Gene3D G3DSA:3.40.50.970 2 326 5.0E-133 T 11-10-2018 Patl_3330 f7b6a247094e90f2e0589b2b0bb1a032 666 SUPERFAMILY SSF52518 346 525 1.03E-64 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Patl_3330 f7b6a247094e90f2e0589b2b0bb1a032 666 SMART SM00861 355 527 4.1E-63 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Patl_3330 f7b6a247094e90f2e0589b2b0bb1a032 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 665 1.4E-299 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 Patl_3330 f7b6a247094e90f2e0589b2b0bb1a032 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 1.5E-165 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Patl_3330 f7b6a247094e90f2e0589b2b0bb1a032 666 SUPERFAMILY SSF52922 534 665 4.97E-44 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Patl_3330 f7b6a247094e90f2e0589b2b0bb1a032 666 Pfam PF02779 Transketolase, pyrimidine binding domain 355 525 3.1E-41 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Patl_3330 f7b6a247094e90f2e0589b2b0bb1a032 666 Gene3D G3DSA:3.40.50.970 327 538 1.1E-77 T 11-10-2018 Patl_3330 f7b6a247094e90f2e0589b2b0bb1a032 666 Pfam PF02780 Transketolase, C-terminal domain 542 656 6.0E-19 T 11-10-2018 IPR033248 Transketolase, C-terminal domain Patl_3330 f7b6a247094e90f2e0589b2b0bb1a032 666 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Patl_4071 fb03d1d6dc610dfcc70996c249b51251 169 SMART SM00014 57 166 1.0E-12 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Patl_4071 fb03d1d6dc610dfcc70996c249b51251 169 Pfam PF01569 PAP2 superfamily 57 165 5.0E-21 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Patl_4071 fb03d1d6dc610dfcc70996c249b51251 169 SUPERFAMILY SSF48317 3 167 1.23E-38 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Patl_4071 fb03d1d6dc610dfcc70996c249b51251 169 Gene3D G3DSA:1.20.144.10 86 169 3.4E-20 T 11-10-2018 Patl_4027 8daf0918d6d8f21eb4a83f440cc662e4 243 SUPERFAMILY SSF53335 19 242 1.49E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_4027 8daf0918d6d8f21eb4a83f440cc662e4 243 Pfam PF13649 Methyltransferase domain 60 158 4.5E-13 T 11-10-2018 Patl_4027 8daf0918d6d8f21eb4a83f440cc662e4 243 PIRSF PIRSF006325 2 243 3.1E-101 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 Patl_4027 8daf0918d6d8f21eb4a83f440cc662e4 243 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 5 242 2.3E-95 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 Patl_4027 8daf0918d6d8f21eb4a83f440cc662e4 243 Gene3D G3DSA:3.40.50.150 18 243 1.0E-59 T 11-10-2018 Patl_4027 8daf0918d6d8f21eb4a83f440cc662e4 243 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 4 242 41.319 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 Patl_1636 c5c3c37ae83776d36a7be4e1b59858e8 729 Gene3D G3DSA:3.20.20.80 231 612 6.1E-164 T 11-10-2018 Patl_1636 c5c3c37ae83776d36a7be4e1b59858e8 729 SUPERFAMILY SSF51445 176 616 5.05E-113 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_1636 c5c3c37ae83776d36a7be4e1b59858e8 729 Pfam PF00128 Alpha amylase, catalytic domain 272 347 8.1E-8 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_1636 c5c3c37ae83776d36a7be4e1b59858e8 729 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 111 723 1.4E-252 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Patl_1636 c5c3c37ae83776d36a7be4e1b59858e8 729 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 724 3.9E-16 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Patl_1636 c5c3c37ae83776d36a7be4e1b59858e8 729 PIRSF PIRSF000463 1 728 1.8E-270 T 11-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Patl_1636 c5c3c37ae83776d36a7be4e1b59858e8 729 SMART SM00642 247 589 4.2E-7 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_1636 c5c3c37ae83776d36a7be4e1b59858e8 729 SUPERFAMILY SSF81296 14 96 4.6E-8 T 11-10-2018 IPR014756 Immunoglobulin E-set Patl_1636 c5c3c37ae83776d36a7be4e1b59858e8 729 Gene3D G3DSA:2.60.40.1180 623 728 2.2E-33 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_1636 c5c3c37ae83776d36a7be4e1b59858e8 729 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 95 727 42.066 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Patl_1636 c5c3c37ae83776d36a7be4e1b59858e8 729 Gene3D G3DSA:2.60.40.10 2 218 1.1E-46 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_1636 c5c3c37ae83776d36a7be4e1b59858e8 729 SUPERFAMILY SSF81296 136 190 1.33E-6 T 11-10-2018 IPR014756 Immunoglobulin E-set Patl_1636 c5c3c37ae83776d36a7be4e1b59858e8 729 SUPERFAMILY SSF51011 623 726 9.35E-26 T 11-10-2018 Patl_1636 c5c3c37ae83776d36a7be4e1b59858e8 729 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 133 202 1.7E-17 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Patl_3785 42498a6d62d7bb8952ea2aa5c30f603f 748 Pfam PF08461 Ribonuclease R winged-helix domain 22 74 1.2E-4 T 11-10-2018 IPR013668 Ribonuclease R winged-helix domain Patl_3785 42498a6d62d7bb8952ea2aa5c30f603f 748 Pfam PF08206 Ribonuclease B OB domain 85 141 5.4E-11 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Patl_3785 42498a6d62d7bb8952ea2aa5c30f603f 748 Gene3D G3DSA:2.40.50.140 65 143 3.1E-12 T 11-10-2018 Patl_3785 42498a6d62d7bb8952ea2aa5c30f603f 748 Gene3D G3DSA:2.40.50.140 670 748 5.7E-7 T 11-10-2018 Patl_3785 42498a6d62d7bb8952ea2aa5c30f603f 748 Pfam PF00575 S1 RNA binding domain 666 746 5.8E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 Patl_3785 42498a6d62d7bb8952ea2aa5c30f603f 748 Pfam PF00773 RNB domain 258 590 2.6E-107 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Patl_3785 42498a6d62d7bb8952ea2aa5c30f603f 748 ProSitePatterns PS01175 Ribonuclease II family signature. 558 582 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site Patl_3785 42498a6d62d7bb8952ea2aa5c30f603f 748 SUPERFAMILY SSF50249 219 665 1.09E-130 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_3785 42498a6d62d7bb8952ea2aa5c30f603f 748 SMART SM00955 258 591 1.7E-172 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Patl_3785 42498a6d62d7bb8952ea2aa5c30f603f 748 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 602 1.4E-192 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Patl_3785 42498a6d62d7bb8952ea2aa5c30f603f 748 Hamap MF_01895 Ribonuclease R [rnr]. 37 748 56.18 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Patl_3785 42498a6d62d7bb8952ea2aa5c30f603f 748 SMART SM00357 84 143 1.7E-6 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Patl_3785 42498a6d62d7bb8952ea2aa5c30f603f 748 SUPERFAMILY SSF50249 669 747 5.05E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_3785 42498a6d62d7bb8952ea2aa5c30f603f 748 SUPERFAMILY SSF50249 69 143 6.86E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_3785 42498a6d62d7bb8952ea2aa5c30f603f 748 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 69 747 2.0E-187 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Patl_3785 42498a6d62d7bb8952ea2aa5c30f603f 748 SUPERFAMILY SSF50249 140 233 2.48E-10 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_4140 a8c401f767015bb8a6c485685f56cea2 52 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 11-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 Patl_4140 a8c401f767015bb8a6c485685f56cea2 52 Pfam PF01679 Proteolipid membrane potential modulator 2 49 1.7E-22 T 11-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 Patl_0342 ebc5c78d0179952354f0a34de018234f 309 Gene3D G3DSA:3.40.190.10 6 210 1.7E-85 T 11-10-2018 Patl_0342 ebc5c78d0179952354f0a34de018234f 309 PIRSF PIRSF001438 1 309 7.8E-123 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Patl_0342 ebc5c78d0179952354f0a34de018234f 309 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 8.8E-116 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Patl_0342 ebc5c78d0179952354f0a34de018234f 309 Gene3D G3DSA:3.30.160.40 221 306 2.9E-28 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Patl_0342 ebc5c78d0179952354f0a34de018234f 309 Gene3D G3DSA:3.40.190.10 103 202 1.7E-85 T 11-10-2018 Patl_0342 ebc5c78d0179952354f0a34de018234f 309 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 3.8E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Patl_0342 ebc5c78d0179952354f0a34de018234f 309 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 3.8E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Patl_0342 ebc5c78d0179952354f0a34de018234f 309 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 3.8E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Patl_0342 ebc5c78d0179952354f0a34de018234f 309 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 3.8E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Patl_0342 ebc5c78d0179952354f0a34de018234f 309 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 3.8E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Patl_0342 ebc5c78d0179952354f0a34de018234f 309 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 9.5E-80 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Patl_0342 ebc5c78d0179952354f0a34de018234f 309 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.467 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Patl_0342 ebc5c78d0179952354f0a34de018234f 309 SUPERFAMILY SSF53850 4 219 1.63E-86 T 11-10-2018 Patl_0342 ebc5c78d0179952354f0a34de018234f 309 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Patl_0342 ebc5c78d0179952354f0a34de018234f 309 SUPERFAMILY SSF54782 220 308 1.31E-27 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Patl_0342 ebc5c78d0179952354f0a34de018234f 309 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 227 295 3.9E-22 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Patl_3018 a70399bd6c258b6e1c11d5d33f21ea8a 209 SUPERFAMILY SSF53335 28 206 5.23E-18 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3018 a70399bd6c258b6e1c11d5d33f21ea8a 209 Pfam PF06080 Protein of unknown function (DUF938) 18 208 1.6E-56 T 11-10-2018 IPR010342 Protein of unknown function DUF938 Patl_3018 a70399bd6c258b6e1c11d5d33f21ea8a 209 Gene3D G3DSA:3.40.50.150 12 205 2.7E-10 T 11-10-2018 Patl_3137 685d3d89fe6c48f70644ce88369f17f2 436 Hamap MF_00303 Trigger factor [tig]. 1 424 22.064 T 11-10-2018 IPR005215 Trigger factor GO:0015031 Patl_3137 685d3d89fe6c48f70644ce88369f17f2 436 Gene3D G3DSA:1.10.3120.10 116 421 2.7E-102 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Patl_3137 685d3d89fe6c48f70644ce88369f17f2 436 Gene3D G3DSA:3.10.50.40 150 246 2.7E-102 T 11-10-2018 Patl_3137 685d3d89fe6c48f70644ce88369f17f2 436 SUPERFAMILY SSF109998 248 433 1.44E-45 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily Patl_3137 685d3d89fe6c48f70644ce88369f17f2 436 PIRSF PIRSF003095 1 436 2.0E-130 T 11-10-2018 IPR005215 Trigger factor GO:0015031 Patl_3137 685d3d89fe6c48f70644ce88369f17f2 436 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 416 1.0E-37 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Patl_3137 685d3d89fe6c48f70644ce88369f17f2 436 SUPERFAMILY SSF102735 1 131 6.02E-41 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Patl_3137 685d3d89fe6c48f70644ce88369f17f2 436 Gene3D G3DSA:3.30.70.1050 1 115 1.2E-39 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Patl_3137 685d3d89fe6c48f70644ce88369f17f2 436 TIGRFAM TIGR00115 tig: trigger factor 11 416 3.0E-145 T 11-10-2018 IPR005215 Trigger factor GO:0015031 Patl_3137 685d3d89fe6c48f70644ce88369f17f2 436 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 236 1.5E-13 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Patl_3137 685d3d89fe6c48f70644ce88369f17f2 436 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 9.7E-41 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Patl_3137 685d3d89fe6c48f70644ce88369f17f2 436 SUPERFAMILY SSF54534 88 241 2.95E-36 T 11-10-2018 Patl_3009 b7eac2fb0fbbfbcdd01db5d60a39938e 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 306 3.4E-14 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Patl_3009 b7eac2fb0fbbfbcdd01db5d60a39938e 331 SUPERFAMILY SSF52540 3 259 1.38E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3009 b7eac2fb0fbbfbcdd01db5d60a39938e 331 Pfam PF00005 ABC transporter 23 187 4.4E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_3009 b7eac2fb0fbbfbcdd01db5d60a39938e 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 324 2.8E-18 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Patl_3009 b7eac2fb0fbbfbcdd01db5d60a39938e 331 SMART SM00382 32 236 6.7E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3009 b7eac2fb0fbbfbcdd01db5d60a39938e 331 Gene3D G3DSA:3.40.50.300 1 331 3.8E-65 T 11-10-2018 Patl_1447 2885d54a0c5bd97aae03d7d948830b68 310 SUPERFAMILY SSF51735 97 276 4.25E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1447 2885d54a0c5bd97aae03d7d948830b68 310 SUPERFAMILY SSF52283 35 124 4.86E-12 T 11-10-2018 Patl_1447 2885d54a0c5bd97aae03d7d948830b68 310 Gene3D G3DSA:3.40.50.720 17 310 1.0E-108 T 11-10-2018 Patl_1447 2885d54a0c5bd97aae03d7d948830b68 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 275 1.8E-47 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Patl_1447 2885d54a0c5bd97aae03d7d948830b68 310 Gene3D G3DSA:3.40.50.720 94 276 1.0E-108 T 11-10-2018 Patl_2081 e2f38ca23a8a2686fa1a57ea98064e6b 296 Gene3D G3DSA:2.40.230.10 30 296 1.7E-85 T 11-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Patl_2081 e2f38ca23a8a2686fa1a57ea98064e6b 296 Pfam PF02253 Phospholipase A1 30 292 6.8E-95 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Patl_2081 e2f38ca23a8a2686fa1a57ea98064e6b 296 SUPERFAMILY SSF56931 33 296 3.4E-87 T 11-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Patl_2081 e2f38ca23a8a2686fa1a57ea98064e6b 296 PRINTS PR01486 Bacterial phospholipase A1 protein signature 243 260 4.0E-23 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Patl_2081 e2f38ca23a8a2686fa1a57ea98064e6b 296 PRINTS PR01486 Bacterial phospholipase A1 protein signature 75 92 4.0E-23 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Patl_2081 e2f38ca23a8a2686fa1a57ea98064e6b 296 PRINTS PR01486 Bacterial phospholipase A1 protein signature 265 285 4.0E-23 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Patl_2081 e2f38ca23a8a2686fa1a57ea98064e6b 296 PRINTS PR01486 Bacterial phospholipase A1 protein signature 120 139 4.0E-23 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Patl_2081 e2f38ca23a8a2686fa1a57ea98064e6b 296 PRINTS PR01486 Bacterial phospholipase A1 protein signature 150 164 4.0E-23 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Patl_2081 e2f38ca23a8a2686fa1a57ea98064e6b 296 PRINTS PR01486 Bacterial phospholipase A1 protein signature 97 113 4.0E-23 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 Patl_2465 e47012dd90acf366ec37e2e7e7754dcb 96 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.173 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 Patl_2465 e47012dd90acf366ec37e2e7e7754dcb 96 SUPERFAMILY SSF47729 1 91 5.0E-31 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Patl_2465 e47012dd90acf366ec37e2e7e7754dcb 96 Gene3D G3DSA:4.10.520.10 40 91 5.7E-27 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Patl_2465 e47012dd90acf366ec37e2e7e7754dcb 96 Gene3D G3DSA:4.10.520.10 2 39 2.2E-9 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Patl_2465 e47012dd90acf366ec37e2e7e7754dcb 96 SMART SM00411 1 91 1.0E-43 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Patl_2465 e47012dd90acf366ec37e2e7e7754dcb 96 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 4.7E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Patl_2465 e47012dd90acf366ec37e2e7e7754dcb 96 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 4.7E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Patl_2465 e47012dd90acf366ec37e2e7e7754dcb 96 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 4.7E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Patl_2465 e47012dd90acf366ec37e2e7e7754dcb 96 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 6.3E-49 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 Patl_2465 e47012dd90acf366ec37e2e7e7754dcb 96 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Patl_2465 e47012dd90acf366ec37e2e7e7754dcb 96 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.1E-30 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Patl_0811 07cb20a188d157134308d2ed1d47d71f 304 Pfam PF06439 Domain of Unknown Function (DUF1080) 44 289 1.5E-28 T 11-10-2018 IPR010496 Domain of unknown function DUF1080 Patl_0811 07cb20a188d157134308d2ed1d47d71f 304 Gene3D G3DSA:2.60.120.560 43 295 5.7E-28 T 11-10-2018 Patl_0583 5592b31f3271699f92845c5032304827 584 SUPERFAMILY SSF55729 317 459 1.53E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_0583 5592b31f3271699f92845c5032304827 584 Pfam PF13444 Acetyltransferase (GNAT) domain 334 436 6.5E-18 T 11-10-2018 Patl_0583 5592b31f3271699f92845c5032304827 584 SUPERFAMILY SSF69593 57 162 1.96E-6 T 11-10-2018 Patl_0583 5592b31f3271699f92845c5032304827 584 Gene3D G3DSA:3.40.630.30 317 463 4.3E-9 T 11-10-2018 Patl_4059 4d4f1c2da7c61aeb27cf3dc4cf1b53d5 283 Gene3D G3DSA:3.40.50.720 1 283 1.2E-45 T 11-10-2018 Patl_4059 4d4f1c2da7c61aeb27cf3dc4cf1b53d5 283 SUPERFAMILY SSF51735 1 247 2.9E-20 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_4059 4d4f1c2da7c61aeb27cf3dc4cf1b53d5 283 Pfam PF04321 RmlD substrate binding domain 99 233 5.3E-8 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Patl_3771 f70622958f4f2e17307c05a8d78d0183 198 SUPERFAMILY SSF46689 7 82 1.28E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_3771 f70622958f4f2e17307c05a8d78d0183 198 Gene3D G3DSA:1.10.357.10 56 194 7.1E-9 T 11-10-2018 Patl_3771 f70622958f4f2e17307c05a8d78d0183 198 Gene3D G3DSA:1.10.10.60 3 55 8.1E-9 T 11-10-2018 Patl_3771 f70622958f4f2e17307c05a8d78d0183 198 SUPERFAMILY SSF48498 87 188 1.27E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Patl_3771 f70622958f4f2e17307c05a8d78d0183 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 59 6.1E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_1228 43246978cfcbe8c8552047fd84669823 370 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 364 3.0E-166 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Patl_1228 43246978cfcbe8c8552047fd84669823 370 SUPERFAMILY SSF51713 1 362 7.19E-162 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Patl_1228 43246978cfcbe8c8552047fd84669823 370 Gene3D G3DSA:3.20.20.105 1 365 1.9E-168 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Patl_1228 43246978cfcbe8c8552047fd84669823 370 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 362 56.523 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Patl_1228 43246978cfcbe8c8552047fd84669823 370 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 365 3.3E-174 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Patl_1228 43246978cfcbe8c8552047fd84669823 370 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 359 3.8E-92 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Patl_2472 1058605622bcf6ce1226f0b395ea7c6a 218 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 181 2.5E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_2472 1058605622bcf6ce1226f0b395ea7c6a 218 Gene3D G3DSA:1.10.150.240 20 87 3.5E-49 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Patl_2472 1058605622bcf6ce1226f0b395ea7c6a 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 187 2.9E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_2472 1058605622bcf6ce1226f0b395ea7c6a 218 Gene3D G3DSA:3.40.50.1000 8 193 3.5E-49 T 11-10-2018 IPR023214 HAD superfamily Patl_2472 1058605622bcf6ce1226f0b395ea7c6a 218 SUPERFAMILY SSF56784 6 218 3.2E-50 T 11-10-2018 IPR036412 HAD-like superfamily Patl_2472 1058605622bcf6ce1226f0b395ea7c6a 218 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 8 202 2.1E-49 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 Patl_2472 1058605622bcf6ce1226f0b395ea7c6a 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 187 9.3E-30 T 11-10-2018 Patl_3366 7d0cec28b15fa4155a305df9ebfc4a85 250 SUPERFAMILY SSF53639 9 220 2.35E-60 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Patl_3366 7d0cec28b15fa4155a305df9ebfc4a85 250 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 18 197 1.5E-46 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal Patl_3366 7d0cec28b15fa4155a305df9ebfc4a85 250 SMART SM01007 17 197 2.2E-62 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal Patl_3366 7d0cec28b15fa4155a305df9ebfc4a85 250 Gene3D G3DSA:3.40.225.10 2 250 7.8E-77 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Patl_2579 1847e6722e7be9d2de00504ca2ecc02e 547 Pfam PF00072 Response regulator receiver domain 8 122 3.6E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2579 1847e6722e7be9d2de00504ca2ecc02e 547 Gene3D G3DSA:3.40.50.2300 2 134 1.5E-22 T 11-10-2018 Patl_2579 1847e6722e7be9d2de00504ca2ecc02e 547 Pfam PF13432 Tetratricopeptide repeat 202 264 3.3E-7 T 11-10-2018 Patl_2579 1847e6722e7be9d2de00504ca2ecc02e 547 SUPERFAMILY SSF52172 4 137 3.7E-24 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2579 1847e6722e7be9d2de00504ca2ecc02e 547 SMART SM00028 163 197 410.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2579 1847e6722e7be9d2de00504ca2ecc02e 547 SMART SM00028 451 484 51.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2579 1847e6722e7be9d2de00504ca2ecc02e 547 SMART SM00028 231 264 0.12 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2579 1847e6722e7be9d2de00504ca2ecc02e 547 Gene3D G3DSA:1.25.40.10 136 294 6.6E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2579 1847e6722e7be9d2de00504ca2ecc02e 547 SUPERFAMILY SSF48452 167 267 4.49E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2579 1847e6722e7be9d2de00504ca2ecc02e 547 SMART SM00448 6 123 7.2E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2027 3cf07862109dc36eda7fad71133aae30 294 Pfam PF01545 Cation efflux family 20 203 2.8E-39 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Patl_2027 3cf07862109dc36eda7fad71133aae30 294 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 14 286 5.5E-61 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Patl_2027 3cf07862109dc36eda7fad71133aae30 294 SUPERFAMILY SSF161111 11 207 8.11E-48 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Patl_2027 3cf07862109dc36eda7fad71133aae30 294 Gene3D G3DSA:1.20.1510.10 14 204 2.5E-39 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Patl_2027 3cf07862109dc36eda7fad71133aae30 294 SUPERFAMILY SSF160240 211 288 1.57E-8 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Patl_0773 9bcd34b5f7536748e40a3969472a0769 237 SMART SM00342 152 235 6.6E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_0773 9bcd34b5f7536748e40a3969472a0769 237 SUPERFAMILY SSF51182 16 139 7.93E-11 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_0773 9bcd34b5f7536748e40a3969472a0769 237 Pfam PF12833 Helix-turn-helix domain 158 236 4.1E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_0773 9bcd34b5f7536748e40a3969472a0769 237 SUPERFAMILY SSF46689 188 236 5.82E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0773 9bcd34b5f7536748e40a3969472a0769 237 Gene3D G3DSA:1.10.10.60 186 237 1.2E-15 T 11-10-2018 Patl_0773 9bcd34b5f7536748e40a3969472a0769 237 SUPERFAMILY SSF46689 136 186 7.53E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0773 9bcd34b5f7536748e40a3969472a0769 237 Gene3D G3DSA:1.10.10.60 129 185 1.5E-9 T 11-10-2018 Patl_0773 9bcd34b5f7536748e40a3969472a0769 237 Gene3D G3DSA:2.60.120.10 1 72 4.7E-9 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_0237 aeec31bc6c814b5cfc04d03da9ef5324 232 SUPERFAMILY SSF54523 64 229 1.26E-41 T 11-10-2018 Patl_0237 aeec31bc6c814b5cfc04d03da9ef5324 232 Gene3D G3DSA:3.10.610.10 64 174 3.8E-35 T 11-10-2018 Patl_0237 aeec31bc6c814b5cfc04d03da9ef5324 232 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 31 51 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0237 aeec31bc6c814b5cfc04d03da9ef5324 232 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 31 48 8.3E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0237 aeec31bc6c814b5cfc04d03da9ef5324 232 Pfam PF11612 Type II secretion system (T2SS), protein J 83 225 2.4E-33 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 Patl_0237 aeec31bc6c814b5cfc04d03da9ef5324 232 Pfam PF07963 Prokaryotic N-terminal methylation motif 27 51 3.1E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0237 aeec31bc6c814b5cfc04d03da9ef5324 232 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 32 227 5.1E-52 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 Patl_4197 fe009d84331ae9f02139858da0080885 401 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 388 22.911 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Patl_4197 fe009d84331ae9f02139858da0080885 401 Pfam PF06965 Na+/H+ antiporter 1 8 382 1.7E-144 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Patl_4197 fe009d84331ae9f02139858da0080885 401 Gene3D G3DSA:1.20.1530.10 3 390 8.3E-147 T 11-10-2018 IPR023171 Na/H antiporter domain superfamily Patl_4197 fe009d84331ae9f02139858da0080885 401 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 9 382 1.8E-146 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Patl_1581 45b9c02ae5645b225f7ce24ca3f1ea38 127 Gene3D G3DSA:3.10.180.10 5 124 7.0E-10 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_1581 45b9c02ae5645b225f7ce24ca3f1ea38 127 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 112 3.3E-8 T 11-10-2018 Patl_1581 45b9c02ae5645b225f7ce24ca3f1ea38 127 SUPERFAMILY SSF54593 6 125 1.41E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2897 e1c5e90ccc2ccaec1813f5401edcf2e1 914 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 360 2.4E-28 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 Patl_2897 e1c5e90ccc2ccaec1813f5401edcf2e1 914 Gene3D G3DSA:1.20.272.10 242 361 4.7E-40 T 11-10-2018 Patl_2897 e1c5e90ccc2ccaec1813f5401edcf2e1 914 Gene3D G3DSA:1.10.8.60 8 239 1.0E-101 T 11-10-2018 Patl_2897 e1c5e90ccc2ccaec1813f5401edcf2e1 914 SUPERFAMILY SSF48019 244 363 1.02E-26 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Patl_2897 e1c5e90ccc2ccaec1813f5401edcf2e1 914 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 788 911 1.2E-25 T 11-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_2897 e1c5e90ccc2ccaec1813f5401edcf2e1 914 Gene3D G3DSA:3.40.50.300 13 177 1.0E-101 T 11-10-2018 Patl_2897 e1c5e90ccc2ccaec1813f5401edcf2e1 914 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.8E-135 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Patl_2897 e1c5e90ccc2ccaec1813f5401edcf2e1 914 Gene3D G3DSA:3.30.300.150 783 895 4.6E-24 T 11-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_2897 e1c5e90ccc2ccaec1813f5401edcf2e1 914 SMART SM00382 37 178 1.8E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2897 e1c5e90ccc2ccaec1813f5401edcf2e1 914 Pfam PF13177 DNA polymerase III, delta subunit 20 178 8.1E-44 T 11-10-2018 Patl_2897 e1c5e90ccc2ccaec1813f5401edcf2e1 914 SUPERFAMILY SSF52540 34 222 1.61E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2692 c1b6a80750bde09c677772ac4023875a 300 Gene3D G3DSA:3.20.20.150 44 297 1.8E-63 T 11-10-2018 Patl_2692 c1b6a80750bde09c677772ac4023875a 300 Pfam PF01261 Xylose isomerase-like TIM barrel 76 257 1.2E-12 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Patl_2692 c1b6a80750bde09c677772ac4023875a 300 SUPERFAMILY SSF51658 57 276 4.77E-35 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily Patl_0270 532b0cec9d2683efb27ae73bb1482327 333 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Patl_0270 532b0cec9d2683efb27ae73bb1482327 333 Gene3D G3DSA:3.20.20.70 6 248 2.7E-78 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_0270 532b0cec9d2683efb27ae73bb1482327 333 SUPERFAMILY SSF51395 10 318 2.09E-85 T 11-10-2018 Patl_0270 532b0cec9d2683efb27ae73bb1482327 333 Gene3D G3DSA:1.10.1200.80 253 328 2.2E-8 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 Patl_0270 532b0cec9d2683efb27ae73bb1482327 333 Pfam PF01207 Dihydrouridine synthase (Dus) 13 314 2.1E-111 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Patl_0270 532b0cec9d2683efb27ae73bb1482327 333 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 318 2.2E-131 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 Patl_0270 532b0cec9d2683efb27ae73bb1482327 333 PIRSF PIRSF006621 1 326 5.6E-104 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Patl_0270 532b0cec9d2683efb27ae73bb1482327 333 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.182 T 11-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 Patl_2238 0897f71f9d16a268cc964cb049bf5d29 421 Gene3D G3DSA:2.40.420.20 56 405 1.1E-44 T 11-10-2018 Patl_2238 0897f71f9d16a268cc964cb049bf5d29 421 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 85 325 1.2E-13 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Patl_2238 0897f71f9d16a268cc964cb049bf5d29 421 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 154 412 7.5E-31 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Patl_2238 0897f71f9d16a268cc964cb049bf5d29 421 Gene3D G3DSA:1.10.287.470 104 231 1.1E-44 T 11-10-2018 Patl_2238 0897f71f9d16a268cc964cb049bf5d29 421 Gene3D G3DSA:2.40.30.170 60 346 1.1E-44 T 11-10-2018 Patl_2238 0897f71f9d16a268cc964cb049bf5d29 421 Gene3D G3DSA:2.40.50.100 71 265 1.1E-44 T 11-10-2018 Patl_0493 9441f5e771bc7717f5657035d3bd4e22 306 SUPERFAMILY SSF54909 1 302 2.15E-95 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_0493 9441f5e771bc7717f5657035d3bd4e22 306 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 299 4.2E-59 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 Patl_0493 9441f5e771bc7717f5657035d3bd4e22 306 Pfam PF04261 Dyp-type peroxidase family 5 298 1.1E-61 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 202 221 6.8E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 436 457 6.8E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 299 314 6.8E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 73 96 6.8E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 376 6.8E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 143 155 6.8E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 100 124 6.8E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 26 51 6.8E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 253 274 6.8E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 386 405 6.8E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 173 191 6.8E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 344 6.8E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 35 477 1.6E-151 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 SUPERFAMILY SSF81442 23 531 6.54E-194 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 Gene3D G3DSA:1.20.210.10 15 532 2.7E-217 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 255 309 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4245 f43c166cd5268eb9176e346f1f965113 532 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 27 530 3.4E-213 T 11-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Patl_2639 163a47fd72543515a29c8e4fe80dcc27 345 Gene3D G3DSA:3.40.50.720 143 310 1.1E-119 T 11-10-2018 Patl_2639 163a47fd72543515a29c8e4fe80dcc27 345 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 22 342 1.9E-136 T 11-10-2018 IPR014188 Acrylyl-CoA reductase AcuI Patl_2639 163a47fd72543515a29c8e4fe80dcc27 345 Pfam PF00107 Zinc-binding dehydrogenase 176 302 6.3E-16 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_2639 163a47fd72543515a29c8e4fe80dcc27 345 SUPERFAMILY SSF50129 22 163 4.4E-39 T 11-10-2018 IPR011032 GroES-like superfamily Patl_2639 163a47fd72543515a29c8e4fe80dcc27 345 Gene3D G3DSA:3.90.180.10 34 340 1.1E-119 T 11-10-2018 Patl_2639 163a47fd72543515a29c8e4fe80dcc27 345 SUPERFAMILY SSF51735 133 306 8.97E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2639 163a47fd72543515a29c8e4fe80dcc27 345 SMART SM00829 30 340 9.0E-4 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_1476 2bff4acd3b24abe8b17965d0ad2bd444 127 Gene3D G3DSA:3.10.450.50 1 127 6.0E-32 T 11-10-2018 Patl_1476 2bff4acd3b24abe8b17965d0ad2bd444 127 Pfam PF12680 SnoaL-like domain 22 109 7.6E-11 T 11-10-2018 IPR037401 SnoaL-like domain Patl_1476 2bff4acd3b24abe8b17965d0ad2bd444 127 SUPERFAMILY SSF54427 7 117 1.76E-22 T 11-10-2018 IPR032710 NTF2-like domain superfamily Patl_0163 b1076935b93681b344e3d239693df3ff 401 Pfam PF00202 Aminotransferase class-III 16 394 1.4E-126 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Patl_0163 b1076935b93681b344e3d239693df3ff 401 Gene3D G3DSA:3.90.1150.10 21 388 1.6E-149 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_0163 b1076935b93681b344e3d239693df3ff 401 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 12 394 1.0E-146 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Patl_0163 b1076935b93681b344e3d239693df3ff 401 Gene3D G3DSA:3.40.640.10 55 300 1.6E-149 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_0163 b1076935b93681b344e3d239693df3ff 401 SUPERFAMILY SSF53383 12 394 6.05E-126 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_0163 b1076935b93681b344e3d239693df3ff 401 PIRSF PIRSF000521 161 398 2.6E-38 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Patl_0163 b1076935b93681b344e3d239693df3ff 401 PIRSF PIRSF000521 21 153 1.1E-5 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Patl_0163 b1076935b93681b344e3d239693df3ff 401 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 68.851 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Patl_0163 b1076935b93681b344e3d239693df3ff 401 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 3 399 9.3E-214 T 11-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 Patl_0163 b1076935b93681b344e3d239693df3ff 401 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 218 255 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Patl_1848 291763b0f7b055e1ee7ae276c6da7972 327 SUPERFAMILY SSF143422 16 193 3.92E-18 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Patl_2357 f40b57e04ed1e321f0131ba6f020b6ee 446 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 4 444 5.5E-222 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 Patl_2357 f40b57e04ed1e321f0131ba6f020b6ee 446 Gene3D G3DSA:3.75.10.20 1 446 4.7E-208 T 11-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 Patl_2357 f40b57e04ed1e321f0131ba6f020b6ee 446 Pfam PF04996 Succinylarginine dihydrolase 3 444 4.2E-226 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 Patl_2357 f40b57e04ed1e321f0131ba6f020b6ee 446 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 445 59.706 T 11-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 Patl_2357 f40b57e04ed1e321f0131ba6f020b6ee 446 SUPERFAMILY SSF55909 3 445 3.14E-209 T 11-10-2018 Patl_1686 dc07a0b6116330b98aa9f5e0f8edeeec 391 SUPERFAMILY SSF54826 1 123 2.12E-31 T 11-10-2018 Patl_1686 dc07a0b6116330b98aa9f5e0f8edeeec 391 Gene3D G3DSA:3.30.390.10 19 382 2.2E-145 T 11-10-2018 IPR029017 Enolase-like, N-terminal Patl_1686 dc07a0b6116330b98aa9f5e0f8edeeec 391 SMART SM00922 146 260 5.4E-15 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Patl_1686 dc07a0b6116330b98aa9f5e0f8edeeec 391 Gene3D G3DSA:3.20.20.120 111 372 2.2E-145 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Patl_1686 dc07a0b6116330b98aa9f5e0f8edeeec 391 Pfam PF13378 Enolase C-terminal domain-like 149 380 1.1E-51 T 11-10-2018 IPR029065 Enolase C-terminal domain-like Patl_1686 dc07a0b6116330b98aa9f5e0f8edeeec 391 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 93 118 - T 11-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 Patl_1686 dc07a0b6116330b98aa9f5e0f8edeeec 391 SUPERFAMILY SSF51604 106 385 1.39E-75 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Patl_1686 dc07a0b6116330b98aa9f5e0f8edeeec 391 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 22 118 1.6E-19 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Patl_1270 b448410f9ecfca0f882a6813fffb1702 657 SUPERFAMILY SSF116726 575 652 2.09E-11 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Patl_1270 b448410f9ecfca0f882a6813fffb1702 657 Gene3D G3DSA:3.40.50.720 405 564 3.5E-34 T 11-10-2018 Patl_1270 b448410f9ecfca0f882a6813fffb1702 657 Gene3D G3DSA:1.20.1530.20 3 385 3.7E-84 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Patl_1270 b448410f9ecfca0f882a6813fffb1702 657 Gene3D G3DSA:3.30.70.1450 582 655 1.0E-8 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Patl_1270 b448410f9ecfca0f882a6813fffb1702 657 Pfam PF02080 TrkA-C domain 585 653 6.7E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Patl_1270 b448410f9ecfca0f882a6813fffb1702 657 Pfam PF02254 TrkA-N domain 409 522 7.2E-25 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Patl_1270 b448410f9ecfca0f882a6813fffb1702 657 SUPERFAMILY SSF51735 405 548 1.44E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1270 b448410f9ecfca0f882a6813fffb1702 657 Pfam PF00999 Sodium/hydrogen exchanger family 9 372 9.4E-65 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Patl_3626 2d8a0077616b396fea170895851c623a 160 Pfam PF01047 MarR family 41 99 5.9E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_3626 2d8a0077616b396fea170895851c623a 160 Gene3D G3DSA:1.10.10.10 13 150 5.7E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3626 2d8a0077616b396fea170895851c623a 160 SMART SM00347 33 134 4.0E-19 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_3626 2d8a0077616b396fea170895851c623a 160 SUPERFAMILY SSF46785 15 150 4.61E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3626 2d8a0077616b396fea170895851c623a 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 1.2E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_3626 2d8a0077616b396fea170895851c623a 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 1.2E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_3626 2d8a0077616b396fea170895851c623a 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 1.2E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_3626 2d8a0077616b396fea170895851c623a 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 1.2E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_0608 2c81be7feb0f592481cff131076fc56e 521 Pfam PF00916 Sulfate permease family 13 376 2.2E-53 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 Patl_0608 2c81be7feb0f592481cff131076fc56e 521 Gene3D G3DSA:3.30.750.24 409 502 8.3E-29 T 11-10-2018 IPR036513 STAS domain superfamily Patl_0608 2c81be7feb0f592481cff131076fc56e 521 Pfam PF01740 STAS domain 417 500 1.6E-9 T 11-10-2018 IPR002645 STAS domain Patl_0608 2c81be7feb0f592481cff131076fc56e 521 SUPERFAMILY SSF52091 415 498 7.85E-14 T 11-10-2018 IPR036513 STAS domain superfamily Patl_3087 1799e3d9d2a0c231a28bd730f267c508 276 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.3E-36 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Patl_3087 1799e3d9d2a0c231a28bd730f267c508 276 Gene3D G3DSA:1.20.1330.10 45 163 2.5E-70 T 11-10-2018 Patl_3087 1799e3d9d2a0c231a28bd730f267c508 276 Gene3D G3DSA:1.20.58.1830 5 33 2.5E-70 T 11-10-2018 Patl_3087 1799e3d9d2a0c231a28bd730f267c508 276 PRINTS PR00207 Flagellin signature 111 134 1.4E-22 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Patl_3087 1799e3d9d2a0c231a28bd730f267c508 276 PRINTS PR00207 Flagellin signature 76 95 1.4E-22 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Patl_3087 1799e3d9d2a0c231a28bd730f267c508 276 PRINTS PR00207 Flagellin signature 37 54 1.4E-22 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Patl_3087 1799e3d9d2a0c231a28bd730f267c508 276 SUPERFAMILY SSF64518 1 275 1.07E-83 T 11-10-2018 Patl_3087 1799e3d9d2a0c231a28bd730f267c508 276 Gene3D G3DSA:1.20.1330.10 183 227 7.5E-17 T 11-10-2018 Patl_3087 1799e3d9d2a0c231a28bd730f267c508 276 Pfam PF00700 Bacterial flagellin C-terminal helical region 192 274 3.0E-25 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Patl_3087 1799e3d9d2a0c231a28bd730f267c508 276 Gene3D G3DSA:1.10.8.410 228 275 1.1E-22 T 11-10-2018 Patl_3014 04819c3a0b38cbdde2bd1d606f77e6e2 71 Pfam PF02599 Global regulator protein family 1 52 1.7E-25 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Patl_3014 04819c3a0b38cbdde2bd1d606f77e6e2 71 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Patl_3014 04819c3a0b38cbdde2bd1d606f77e6e2 71 Gene3D G3DSA:3.30.70.1680 1 59 3.9E-29 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Patl_3014 04819c3a0b38cbdde2bd1d606f77e6e2 71 SUPERFAMILY SSF117130 1 54 2.75E-20 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Patl_3014 04819c3a0b38cbdde2bd1d606f77e6e2 71 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 69 16.989 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Patl_3014 04819c3a0b38cbdde2bd1d606f77e6e2 71 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 62 5.7E-30 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Patl_4215 3def20ba09ddcfd0ec25d624dd37cedb 269 ProSitePatterns PS01218 TatC family signature. 152 171 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site Patl_4215 3def20ba09ddcfd0ec25d624dd37cedb 269 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 237 15.672 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Patl_4215 3def20ba09ddcfd0ec25d624dd37cedb 269 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 6 33 1.1E-47 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Patl_4215 3def20ba09ddcfd0ec25d624dd37cedb 269 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 152 180 1.1E-47 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Patl_4215 3def20ba09ddcfd0ec25d624dd37cedb 269 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 83 101 1.1E-47 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Patl_4215 3def20ba09ddcfd0ec25d624dd37cedb 269 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 101 127 1.1E-47 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Patl_4215 3def20ba09ddcfd0ec25d624dd37cedb 269 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 7 224 3.5E-74 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Patl_4215 3def20ba09ddcfd0ec25d624dd37cedb 269 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 219 1.3E-64 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Patl_4295 c95e83160225d594b1e627a38da6a5a6 461 Gene3D G3DSA:1.10.1140.10 346 461 1.1E-59 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_4295 c95e83160225d594b1e627a38da6a5a6 461 SMART SM00382 143 328 0.0023 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_4295 c95e83160225d594b1e627a38da6a5a6 461 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 334 343 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_4295 c95e83160225d594b1e627a38da6a5a6 461 SUPERFAMILY SSF50615 1 75 1.86E-23 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_4295 c95e83160225d594b1e627a38da6a5a6 461 SUPERFAMILY SSF47917 346 461 4.71E-54 T 11-10-2018 Patl_4295 c95e83160225d594b1e627a38da6a5a6 461 Gene3D G3DSA:2.40.10.170 1 76 2.2E-27 T 11-10-2018 Patl_4295 c95e83160225d594b1e627a38da6a5a6 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 343 1.6E-63 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_4295 c95e83160225d594b1e627a38da6a5a6 461 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 74 2.1E-19 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_4295 c95e83160225d594b1e627a38da6a5a6 461 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 461 56.562 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Patl_4295 c95e83160225d594b1e627a38da6a5a6 461 SUPERFAMILY SSF52540 78 349 9.12E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4295 c95e83160225d594b1e627a38da6a5a6 461 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 461 7.5E-256 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Patl_4295 c95e83160225d594b1e627a38da6a5a6 461 Gene3D G3DSA:3.40.50.300 77 345 1.3E-111 T 11-10-2018 Patl_0927 6ce42ab56e2226d0e065a31a83958185 83 SUPERFAMILY SSF55229 34 83 4.32E-16 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Patl_0927 6ce42ab56e2226d0e065a31a83958185 83 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 2 83 5.6E-31 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Patl_0927 6ce42ab56e2226d0e065a31a83958185 83 Gene3D G3DSA:3.30.1070.10 1 83 1.4E-29 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Patl_0927 6ce42ab56e2226d0e065a31a83958185 83 Pfam PF03776 Septum formation topological specificity factor MinE 15 82 6.0E-26 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Patl_0927 6ce42ab56e2226d0e065a31a83958185 83 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 83 19.544 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Patl_1184 ecd1786969e7a7f84844194eca25c0cb 412 Pfam PF04932 O-Antigen ligase 182 323 6.9E-9 T 11-10-2018 IPR007016 O-antigen ligase-related Patl_1007 804847df03982c6a2b4f5b99cfe12bf7 62 PIRSF PIRSF002211 3 62 7.6E-26 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1007 804847df03982c6a2b4f5b99cfe12bf7 62 SUPERFAMILY SSF55129 5 61 3.01E-20 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Patl_1007 804847df03982c6a2b4f5b99cfe12bf7 62 Gene3D G3DSA:3.30.1390.20 3 61 1.4E-25 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Patl_1007 804847df03982c6a2b4f5b99cfe12bf7 62 ProSitePatterns PS00634 Ribosomal protein L30 signature. 25 57 - T 11-10-2018 IPR018038 Ribosomal protein L30, conserved site Patl_1007 804847df03982c6a2b4f5b99cfe12bf7 62 Pfam PF00327 Ribosomal protein L30p/L7e 7 57 8.6E-18 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Patl_1007 804847df03982c6a2b4f5b99cfe12bf7 62 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 4 61 20.604 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1007 804847df03982c6a2b4f5b99cfe12bf7 62 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 7 61 4.3E-25 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3574 6b8ca4310c392bc344f84e41062bd36f 321 SUPERFAMILY SSF56112 4 317 6.46E-85 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Patl_3574 6b8ca4310c392bc344f84e41062bd36f 321 Gene3D G3DSA:1.20.1270.170 147 304 1.7E-124 T 11-10-2018 Patl_3574 6b8ca4310c392bc344f84e41062bd36f 321 Gene3D G3DSA:1.10.510.10 58 255 1.7E-124 T 11-10-2018 Patl_3574 6b8ca4310c392bc344f84e41062bd36f 321 Hamap MF_01497 Stress response kinase A [srkA]. 2 315 47.201 T 11-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Patl_3574 6b8ca4310c392bc344f84e41062bd36f 321 Pfam PF01636 Phosphotransferase enzyme family 34 260 1.0E-39 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase Patl_3574 6b8ca4310c392bc344f84e41062bd36f 321 Gene3D G3DSA:3.30.200.70 11 106 1.7E-124 T 11-10-2018 Patl_4179 22925312e156ecf78fc50e54329f2d76 724 Gene3D G3DSA:2.60.40.10 78 193 3.2E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_4179 22925312e156ecf78fc50e54329f2d76 724 SUPERFAMILY SSF49265 87 183 4.11E-6 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 Patl_2316 447b98de2db113fc2989fa41c0d6eeb8 223 Pfam PF03412 Peptidase C39 family 42 176 1.6E-19 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 Patl_2316 447b98de2db113fc2989fa41c0d6eeb8 223 Gene3D G3DSA:3.90.70.10 31 187 1.5E-32 T 11-10-2018 Patl_3408 f00a4e954a7f00d3438d424b19b64380 370 SUPERFAMILY SSF56300 48 361 1.17E-28 T 11-10-2018 Patl_3408 f00a4e954a7f00d3438d424b19b64380 370 Gene3D G3DSA:3.60.21.70 47 369 2.5E-42 T 11-10-2018 IPR038607 PhoD-like superfamily Patl_3408 f00a4e954a7f00d3438d424b19b64380 370 Pfam PF09423 PhoD-like phosphatase 63 322 1.4E-22 T 11-10-2018 IPR018946 Alkaline phosphatase D-related Patl_3761 bbc99c922309ae3eeffbbb552df6c5dd 205 SUPERFAMILY SSF54909 1 78 8.67E-11 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_3761 bbc99c922309ae3eeffbbb552df6c5dd 205 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 66 1.4E-6 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Patl_3761 bbc99c922309ae3eeffbbb552df6c5dd 205 Pfam PF03992 Antibiotic biosynthesis monooxygenase 115 180 1.0E-9 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Patl_3761 bbc99c922309ae3eeffbbb552df6c5dd 205 SUPERFAMILY SSF54909 106 195 9.08E-18 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_3761 bbc99c922309ae3eeffbbb552df6c5dd 205 Gene3D G3DSA:3.30.70.100 1 88 8.9E-10 T 11-10-2018 Patl_3761 bbc99c922309ae3eeffbbb552df6c5dd 205 Gene3D G3DSA:3.30.70.100 97 200 2.0E-14 T 11-10-2018 Patl_1615 220577537b87f06cf47c091e8b3f72d9 188 Gene3D G3DSA:3.40.50.1000 12 185 4.2E-29 T 11-10-2018 IPR023214 HAD superfamily Patl_1615 220577537b87f06cf47c091e8b3f72d9 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 38 142 3.6E-12 T 11-10-2018 Patl_1615 220577537b87f06cf47c091e8b3f72d9 188 SUPERFAMILY SSF56784 13 162 9.75E-23 T 11-10-2018 IPR036412 HAD-like superfamily Patl_2430 134cb09806dce2dafdfc51fa1b9418aa 404 Pfam PF06181 Urate oxidase N-terminal 3 296 4.7E-129 T 11-10-2018 IPR010389 Urate oxidase N-terminal Patl_2430 134cb09806dce2dafdfc51fa1b9418aa 404 SUPERFAMILY SSF46626 330 402 7.85E-5 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 SUPERFAMILY SSF55957 400 480 1.03E-16 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 SUPERFAMILY SSF53738 3 203 1.65E-33 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 6 119 1.0E-29 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 248 2.7E-28 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 196 215 2.7E-28 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 264 279 2.7E-28 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 90 104 2.7E-28 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 Gene3D G3DSA:3.40.120.10 1 145 2.0E-47 T 11-10-2018 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 91 100 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 179 284 4.3E-20 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 289 397 2.4E-24 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 SUPERFAMILY SSF53738 179 287 3.73E-26 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 404 479 6.4E-9 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 SUPERFAMILY SSF53738 289 393 7.46E-32 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 Gene3D G3DSA:3.40.120.10 281 397 5.1E-35 T 11-10-2018 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 Gene3D G3DSA:3.40.120.10 198 280 1.8E-27 T 11-10-2018 Patl_1793 9006a8da0a6941d642ae93b0357f53f0 481 Gene3D G3DSA:3.30.310.50 400 481 4.1E-25 T 11-10-2018 Patl_3503 7fc542f8cad08870e3ed27a7903bbbb9 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 10 175 3.5E-39 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 Patl_3503 7fc542f8cad08870e3ed27a7903bbbb9 189 Gene3D G3DSA:1.20.120.740 3 189 5.2E-55 T 11-10-2018 Patl_3503 7fc542f8cad08870e3ed27a7903bbbb9 189 SUPERFAMILY SSF101327 7 174 1.06E-44 T 11-10-2018 IPR036255 YgfB-like superfamily Patl_3503 7fc542f8cad08870e3ed27a7903bbbb9 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 7 156 1.3E-13 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 Patl_3226 f73fad16d491432f5deecf8dd027c34a 319 Gene3D G3DSA:1.10.40.60 120 217 2.6E-6 T 11-10-2018 IPR038072 GspK, central domain superfamily Patl_3226 f73fad16d491432f5deecf8dd027c34a 319 SUPERFAMILY SSF158544 129 206 9.94E-7 T 11-10-2018 IPR038072 GspK, central domain superfamily Patl_2782 414543dbfef8066d7c591b6800cd2578 724 Pfam PF00326 Prolyl oligopeptidase family 506 720 3.0E-68 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Patl_2782 414543dbfef8066d7c591b6800cd2578 724 SUPERFAMILY SSF53474 458 699 1.34E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2782 414543dbfef8066d7c591b6800cd2578 724 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 50 446 8.9E-127 T 11-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 Patl_2782 414543dbfef8066d7c591b6800cd2578 724 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 551 581 - T 11-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 Patl_2782 414543dbfef8066d7c591b6800cd2578 724 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 574 594 1.3E-60 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Patl_2782 414543dbfef8066d7c591b6800cd2578 724 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 630 645 1.3E-60 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Patl_2782 414543dbfef8066d7c591b6800cd2578 724 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 649 671 1.3E-60 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Patl_2782 414543dbfef8066d7c591b6800cd2578 724 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 516 540 1.3E-60 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Patl_2782 414543dbfef8066d7c591b6800cd2578 724 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 544 563 1.3E-60 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Patl_2782 414543dbfef8066d7c591b6800cd2578 724 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 490 508 1.3E-60 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Patl_2782 414543dbfef8066d7c591b6800cd2578 724 Gene3D G3DSA:3.40.50.1820 57 689 1.0E-256 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2782 414543dbfef8066d7c591b6800cd2578 724 Gene3D G3DSA:2.130.10.120 114 450 1.0E-256 T 11-10-2018 Patl_2782 414543dbfef8066d7c591b6800cd2578 724 SUPERFAMILY SSF50993 43 454 3.14E-95 T 11-10-2018 Patl_2492 00bc8c4dbe8e784236300b5a70ea23c4 821 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 6.2E-108 T 11-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 Patl_2492 00bc8c4dbe8e784236300b5a70ea23c4 821 Gene3D G3DSA:1.10.540.10 123 236 4.6E-100 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Patl_2492 00bc8c4dbe8e784236300b5a70ea23c4 821 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 121 234 1.7E-16 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Patl_2492 00bc8c4dbe8e784236300b5a70ea23c4 821 Gene3D G3DSA:2.40.110.10 237 360 4.6E-100 T 11-10-2018 Patl_2492 00bc8c4dbe8e784236300b5a70ea23c4 821 SUPERFAMILY SSF47203 361 509 3.54E-25 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_2492 00bc8c4dbe8e784236300b5a70ea23c4 821 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 507 1.6E-14 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_2492 00bc8c4dbe8e784236300b5a70ea23c4 821 SUPERFAMILY SSF56645 118 356 6.68E-45 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_2492 00bc8c4dbe8e784236300b5a70ea23c4 821 Gene3D G3DSA:1.20.140.10 361 506 4.6E-100 T 11-10-2018 Patl_2267 79f08a874acc2948b07c666ca50b8246 461 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 13 460 3.3E-107 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Patl_2267 79f08a874acc2948b07c666ca50b8246 461 Pfam PF02447 GntP family permease 12 458 1.3E-120 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Patl_2267 79f08a874acc2948b07c666ca50b8246 461 PIRSF PIRSF002746 8 461 6.1E-147 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Patl_2940 2273ff07a3a415702e1f85c71cd4fea4 298 Gene3D G3DSA:3.30.1150.10 199 297 1.1E-29 T 11-10-2018 Patl_2940 2273ff07a3a415702e1f85c71cd4fea4 298 TIGRFAM TIGR02794 tolA_full: protein TolA 8 296 8.1E-49 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 Patl_2940 2273ff07a3a415702e1f85c71cd4fea4 298 SUPERFAMILY SSF74653 210 296 2.94E-20 T 11-10-2018 Patl_2940 2273ff07a3a415702e1f85c71cd4fea4 298 Pfam PF06519 TolA C-terminal 200 294 2.8E-30 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 Patl_0473 7ae68878b431445ab2cc1850c9bae867 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.1E-24 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0473 7ae68878b431445ab2cc1850c9bae867 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.1E-24 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0473 7ae68878b431445ab2cc1850c9bae867 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.1E-24 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0473 7ae68878b431445ab2cc1850c9bae867 91 Pfam PF00203 Ribosomal protein S19 3 83 2.8E-36 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0473 7ae68878b431445ab2cc1850c9bae867 91 SUPERFAMILY SSF54570 3 83 2.62E-35 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0473 7ae68878b431445ab2cc1850c9bae867 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.385 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0473 7ae68878b431445ab2cc1850c9bae867 91 Gene3D G3DSA:3.30.860.10 1 91 2.9E-42 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0473 7ae68878b431445ab2cc1850c9bae867 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 4.4E-46 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 Patl_0473 7ae68878b431445ab2cc1850c9bae867 91 PIRSF PIRSF002144 1 91 2.8E-31 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0473 7ae68878b431445ab2cc1850c9bae867 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1072 751967f0c6f71e8eea3745558145eabd 178 Gene3D G3DSA:3.30.1950.10 31 102 1.9E-20 T 11-10-2018 Patl_1072 751967f0c6f71e8eea3745558145eabd 178 Pfam PF02563 Polysaccharide biosynthesis/export protein 24 98 7.2E-17 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Patl_1072 751967f0c6f71e8eea3745558145eabd 178 Pfam PF10531 SLBB domain 105 155 1.8E-10 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Patl_1072 751967f0c6f71e8eea3745558145eabd 178 Gene3D G3DSA:3.10.560.10 25 175 1.9E-20 T 11-10-2018 Patl_0513 656ac1257843b8aef23241511caea108 439 Pfam PF08525 Opacity-associated protein A N-terminal motif 13 39 4.4E-7 T 11-10-2018 IPR013731 Opacity-associated protein A, N-terminal Patl_0513 656ac1257843b8aef23241511caea108 439 Pfam PF01551 Peptidase family M23 304 398 1.9E-31 T 11-10-2018 IPR016047 Peptidase M23 Patl_0513 656ac1257843b8aef23241511caea108 439 Gene3D G3DSA:3.10.450.350 182 418 1.3E-81 T 11-10-2018 Patl_0513 656ac1257843b8aef23241511caea108 439 Pfam PF04225 Opacity-associated protein A LysM-like domain 81 148 1.9E-9 T 11-10-2018 IPR007340 Opacity-associated protein A Patl_0513 656ac1257843b8aef23241511caea108 439 Gene3D G3DSA:2.70.70.10 275 404 1.3E-81 T 11-10-2018 IPR011055 Duplicated hybrid motif Patl_0513 656ac1257843b8aef23241511caea108 439 Gene3D G3DSA:3.10.450.350 70 181 3.5E-18 T 11-10-2018 Patl_0513 656ac1257843b8aef23241511caea108 439 SUPERFAMILY SSF51261 159 399 8.37E-69 T 11-10-2018 IPR011055 Duplicated hybrid motif Patl_1614 c86c8531b73daf56330681f4b41267a7 250 SUPERFAMILY SSF47240 5 248 1.69E-72 T 11-10-2018 IPR009078 Ferritin-like superfamily Patl_1614 c86c8531b73daf56330681f4b41267a7 250 PIRSF PIRSF020736 1 250 2.4E-87 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 Patl_1614 c86c8531b73daf56330681f4b41267a7 250 Gene3D G3DSA:1.20.1260.10 2 73 1.5E-16 T 11-10-2018 IPR012347 Ferritin-like Patl_1614 c86c8531b73daf56330681f4b41267a7 250 Gene3D G3DSA:1.20.1260.10 92 250 8.4E-53 T 11-10-2018 IPR012347 Ferritin-like Patl_1614 c86c8531b73daf56330681f4b41267a7 250 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 4 245 1.1E-108 T 11-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 Patl_4235 d2d2a55ece6e4e8f5a382ede4a517650 349 Gene3D G3DSA:3.20.20.370 22 247 1.4E-54 T 11-10-2018 Patl_4235 d2d2a55ece6e4e8f5a382ede4a517650 349 Pfam PF01522 Polysaccharide deacetylase 78 210 7.5E-21 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Patl_4235 d2d2a55ece6e4e8f5a382ede4a517650 349 SUPERFAMILY SSF88713 41 211 1.89E-33 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Patl_3289 54809a2e3fed84518a09e0098a223ee1 218 Gene3D G3DSA:3.40.50.150 1 217 5.8E-50 T 11-10-2018 Patl_3289 54809a2e3fed84518a09e0098a223ee1 218 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 23 29 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Patl_3289 54809a2e3fed84518a09e0098a223ee1 218 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 155 172 6.7E-24 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Patl_3289 54809a2e3fed84518a09e0098a223ee1 218 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 66 86 6.7E-24 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Patl_3289 54809a2e3fed84518a09e0098a223ee1 218 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 174 192 6.7E-24 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Patl_3289 54809a2e3fed84518a09e0098a223ee1 218 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 197 217 6.7E-24 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Patl_3289 54809a2e3fed84518a09e0098a223ee1 218 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 19 33 6.7E-24 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Patl_3289 54809a2e3fed84518a09e0098a223ee1 218 SUPERFAMILY SSF53335 2 217 1.86E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3289 54809a2e3fed84518a09e0098a223ee1 218 Pfam PF01555 DNA methylase 20 213 3.8E-33 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Patl_1463 87622a56f60f8ae39d83b834a8e9487d 149 SUPERFAMILY SSF46785 5 143 7.24E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1463 87622a56f60f8ae39d83b834a8e9487d 149 Gene3D G3DSA:1.10.10.10 1 148 2.5E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1463 87622a56f60f8ae39d83b834a8e9487d 149 Pfam PF01047 MarR family 33 88 9.1E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_1463 87622a56f60f8ae39d83b834a8e9487d 149 SMART SM00347 25 125 3.7E-14 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_0531 382e7873bccc958422b3921cc25c31e1 279 SUPERFAMILY SSF51197 8 276 4.33E-59 T 11-10-2018 Patl_0531 382e7873bccc958422b3921cc25c31e1 279 Gene3D G3DSA:2.60.120.330 1 279 7.9E-91 T 11-10-2018 IPR027443 Isopenicillin N synthase-like Patl_0531 382e7873bccc958422b3921cc25c31e1 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 15 95 1.2E-8 T 11-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain Patl_0531 382e7873bccc958422b3921cc25c31e1 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 2.5E-16 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 Patl_1887 455896f2f8afd56328fcba7936df4fae 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Patl_1887 455896f2f8afd56328fcba7936df4fae 164 Gene3D G3DSA:2.40.100.10 1 164 1.5E-68 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Patl_1887 455896f2f8afd56328fcba7936df4fae 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.3E-12 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_1887 455896f2f8afd56328fcba7936df4fae 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.3E-12 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_1887 455896f2f8afd56328fcba7936df4fae 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.3E-12 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_1887 455896f2f8afd56328fcba7936df4fae 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 162 1.8E-48 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_1887 455896f2f8afd56328fcba7936df4fae 164 SUPERFAMILY SSF50891 1 162 4.97E-59 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Patl_1887 455896f2f8afd56328fcba7936df4fae 164 PIRSF PIRSF001467 1 164 1.9E-29 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Patl_3250 5ee14b8106922a93c728b9053cc96036 190 ProSitePatterns PS00194 Thioredoxin family active site. 67 85 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Patl_3250 5ee14b8106922a93c728b9053cc96036 190 Gene3D G3DSA:3.40.30.10 24 190 1.3E-33 T 11-10-2018 Patl_3250 5ee14b8106922a93c728b9053cc96036 190 SUPERFAMILY SSF52833 42 187 7.27E-27 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_3250 5ee14b8106922a93c728b9053cc96036 190 Pfam PF08534 Redoxin 38 174 4.3E-13 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Patl_2853 e7d5085e58b8b3207d53699dcd0451bc 327 SUPERFAMILY SSF56349 70 295 3.83E-57 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Patl_2853 e7d5085e58b8b3207d53699dcd0451bc 327 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 76 277 1.5E-30 T 11-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 Patl_2853 e7d5085e58b8b3207d53699dcd0451bc 327 Gene3D G3DSA:3.90.15.10 105 224 8.9E-82 T 11-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 Patl_2853 e7d5085e58b8b3207d53699dcd0451bc 327 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 158 174 1.4E-8 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Patl_2853 e7d5085e58b8b3207d53699dcd0451bc 327 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 274 285 1.4E-8 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Patl_2853 e7d5085e58b8b3207d53699dcd0451bc 327 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 223 237 1.4E-8 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Patl_2853 e7d5085e58b8b3207d53699dcd0451bc 327 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 114 133 1.4E-8 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Patl_2853 e7d5085e58b8b3207d53699dcd0451bc 327 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 137 151 1.4E-8 T 11-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 Patl_2853 e7d5085e58b8b3207d53699dcd0451bc 327 Gene3D G3DSA:3.30.66.10 1 81 1.4E-21 T 11-10-2018 IPR035447 DNA topoisomerase I, N-terminal Patl_2853 e7d5085e58b8b3207d53699dcd0451bc 327 Gene3D G3DSA:1.10.132.120 82 316 8.9E-82 T 11-10-2018 Patl_2853 e7d5085e58b8b3207d53699dcd0451bc 327 SUPERFAMILY SSF55869 14 74 2.22E-13 T 11-10-2018 IPR035447 DNA topoisomerase I, N-terminal Patl_1424 e43d3cf9f250073efb6c63fb5bb221de 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 166 325 3.4E-40 T 11-10-2018 IPR000160 GGDEF domain Patl_1424 e43d3cf9f250073efb6c63fb5bb221de 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 327 3.5E-42 T 11-10-2018 IPR000160 GGDEF domain Patl_1424 e43d3cf9f250073efb6c63fb5bb221de 337 SMART SM00267 153 330 1.1E-43 T 11-10-2018 IPR000160 GGDEF domain Patl_1424 e43d3cf9f250073efb6c63fb5bb221de 337 SUPERFAMILY SSF55073 170 328 7.14E-40 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_1424 e43d3cf9f250073efb6c63fb5bb221de 337 Gene3D G3DSA:3.30.70.270 152 330 8.5E-48 T 11-10-2018 Patl_3692 12da486ce849acbe3b8a6322e08d6e6a 281 PIRSF PIRSF005917 2 280 3.5E-104 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Patl_3692 12da486ce849acbe3b8a6322e08d6e6a 281 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 275 2.3E-93 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Patl_3692 12da486ce849acbe3b8a6322e08d6e6a 281 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 84 95 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 Patl_3692 12da486ce849acbe3b8a6322e08d6e6a 281 Gene3D G3DSA:3.40.1010.10 1 113 6.9E-47 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Patl_3692 12da486ce849acbe3b8a6322e08d6e6a 281 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 6 227 36.573 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Patl_3692 12da486ce849acbe3b8a6322e08d6e6a 281 SUPERFAMILY SSF53790 5 225 1.13E-80 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Patl_3692 12da486ce849acbe3b8a6322e08d6e6a 281 Gene3D G3DSA:3.30.950.10 114 234 2.4E-39 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Patl_3692 12da486ce849acbe3b8a6322e08d6e6a 281 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 206 4.8E-27 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Patl_2945 c1292ac1128a8eed827cd12c082033f1 209 SUPERFAMILY SSF47781 68 139 6.3E-21 T 11-10-2018 IPR010994 RuvA domain 2-like Patl_2945 c1292ac1128a8eed827cd12c082033f1 209 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 3 209 31.429 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Patl_2945 c1292ac1128a8eed827cd12c082033f1 209 Pfam PF07499 RuvA, C-terminal domain 164 208 4.1E-14 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 Patl_2945 c1292ac1128a8eed827cd12c082033f1 209 Gene3D G3DSA:1.10.150.20 69 141 1.9E-25 T 11-10-2018 Patl_2945 c1292ac1128a8eed827cd12c082033f1 209 SUPERFAMILY SSF50249 3 65 9.14E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_2945 c1292ac1128a8eed827cd12c082033f1 209 Gene3D G3DSA:1.10.8.10 162 209 7.4E-18 T 11-10-2018 Patl_2945 c1292ac1128a8eed827cd12c082033f1 209 SUPERFAMILY SSF46929 163 208 2.88E-11 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily Patl_2945 c1292ac1128a8eed827cd12c082033f1 209 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 3 208 5.2E-61 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Patl_2945 c1292ac1128a8eed827cd12c082033f1 209 Pfam PF14520 Helix-hairpin-helix domain 74 132 4.6E-15 T 11-10-2018 Patl_2945 c1292ac1128a8eed827cd12c082033f1 209 SMART SM00278 110 129 0.21 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Patl_2945 c1292ac1128a8eed827cd12c082033f1 209 SMART SM00278 75 94 12.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Patl_2945 c1292ac1128a8eed827cd12c082033f1 209 Gene3D G3DSA:2.40.50.140 3 68 1.9E-28 T 11-10-2018 Patl_2945 c1292ac1128a8eed827cd12c082033f1 209 Pfam PF01330 RuvA N terminal domain 3 64 4.9E-22 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 Patl_2645 ce4b280f5342af99313cc8a69c68088b 466 Pfam PF07690 Major Facilitator Superfamily 26 397 1.1E-57 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_2645 ce4b280f5342af99313cc8a69c68088b 466 Gene3D G3DSA:1.20.1250.20 239 437 2.8E-30 T 11-10-2018 Patl_2645 ce4b280f5342af99313cc8a69c68088b 466 Gene3D G3DSA:1.20.1250.20 13 207 2.4E-44 T 11-10-2018 Patl_2645 ce4b280f5342af99313cc8a69c68088b 466 SUPERFAMILY SSF103473 12 437 1.28E-77 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_2645 ce4b280f5342af99313cc8a69c68088b 466 PIRSF PIRSF002808 2 448 1.6E-39 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 Patl_3552 28ec727da64b4d06d6319150a1f6a163 128 Gene3D G3DSA:3.10.180.10 1 127 2.3E-29 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_3552 28ec727da64b4d06d6319150a1f6a163 128 SUPERFAMILY SSF54593 2 126 7.01E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_3552 28ec727da64b4d06d6319150a1f6a163 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 121 5.8E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Patl_3320 e3c99bb7d1b33b8cfce4b41406ee2863 225 Gene3D G3DSA:1.20.58.220 1 225 8.2E-60 T 11-10-2018 IPR038078 PhoU-like domain superfamily Patl_3320 e3c99bb7d1b33b8cfce4b41406ee2863 225 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 7 224 1.2E-59 T 11-10-2018 IPR002727 Protein of unknown function DUF47 Patl_3320 e3c99bb7d1b33b8cfce4b41406ee2863 225 Pfam PF01865 Protein of unknown function DUF47 7 224 1.4E-59 T 11-10-2018 IPR018445 Putative phosphate transport regulator Patl_3320 e3c99bb7d1b33b8cfce4b41406ee2863 225 SUPERFAMILY SSF109755 51 215 1.99E-11 T 11-10-2018 Patl_3975 f2a441118358fd0d66bc58ff3075e816 430 Pfam PF11741 AMIN domain 18 118 8.4E-22 T 11-10-2018 IPR021731 AMIN domain Patl_3975 f2a441118358fd0d66bc58ff3075e816 430 Gene3D G3DSA:3.10.350.10 382 430 1.6E-15 T 11-10-2018 IPR036779 LysM domain superfamily Patl_3975 f2a441118358fd0d66bc58ff3075e816 430 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 144 363 2.9E-46 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Patl_3975 f2a441118358fd0d66bc58ff3075e816 430 Pfam PF01476 LysM domain 386 428 9.0E-13 T 11-10-2018 IPR018392 LysM domain Patl_3975 f2a441118358fd0d66bc58ff3075e816 430 SMART SM00646 204 363 9.1E-52 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Patl_3975 f2a441118358fd0d66bc58ff3075e816 430 SUPERFAMILY SSF54106 384 428 6.15E-11 T 11-10-2018 Patl_3975 f2a441118358fd0d66bc58ff3075e816 430 SUPERFAMILY SSF53187 142 366 3.45E-51 T 11-10-2018 Patl_3975 f2a441118358fd0d66bc58ff3075e816 430 Gene3D G3DSA:3.40.630.40 130 370 2.5E-71 T 11-10-2018 Patl_3975 f2a441118358fd0d66bc58ff3075e816 430 SMART SM00257 385 428 3.0E-15 T 11-10-2018 IPR018392 LysM domain Patl_3975 f2a441118358fd0d66bc58ff3075e816 430 Gene3D G3DSA:2.60.40.3500 8 120 1.5E-27 T 11-10-2018 Patl_3777 dba799b2307334c1a008f07d1d7a12ff 420 Pfam PF00557 Metallopeptidase family M24 189 395 8.5E-55 T 11-10-2018 IPR000994 Peptidase M24 Patl_3777 dba799b2307334c1a008f07d1d7a12ff 420 Gene3D G3DSA:3.40.350.10 11 179 2.5E-42 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Patl_3777 dba799b2307334c1a008f07d1d7a12ff 420 SUPERFAMILY SSF53092 26 179 2.79E-26 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Patl_3777 dba799b2307334c1a008f07d1d7a12ff 420 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 341 353 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Patl_3777 dba799b2307334c1a008f07d1d7a12ff 420 Pfam PF01321 Creatinase/Prolidase N-terminal domain 46 180 8.2E-17 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Patl_3777 dba799b2307334c1a008f07d1d7a12ff 420 Gene3D G3DSA:3.90.230.10 180 413 2.8E-73 T 11-10-2018 Patl_3777 dba799b2307334c1a008f07d1d7a12ff 420 SUPERFAMILY SSF55920 183 403 2.09E-69 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like Patl_3534 d9a743540f73413e0042e56355929fed 360 PIRSF PIRSF005096 1 360 2.8E-142 T 11-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 Patl_3534 d9a743540f73413e0042e56355929fed 360 Pfam PF01263 Aldose 1-epimerase 19 356 1.4E-89 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 Patl_3534 d9a743540f73413e0042e56355929fed 360 Gene3D G3DSA:2.70.98.10 9 359 1.2E-118 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Patl_3534 d9a743540f73413e0042e56355929fed 360 SUPERFAMILY SSF74650 2 357 6.91E-110 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Patl_2779 07cee23f02e5d11bdcda3ad64d2e34f5 302 Gene3D G3DSA:3.30.470.80 182 300 6.4E-40 T 11-10-2018 Patl_2779 07cee23f02e5d11bdcda3ad64d2e34f5 302 SUPERFAMILY SSF56059 98 289 1.56E-48 T 11-10-2018 Patl_2779 07cee23f02e5d11bdcda3ad64d2e34f5 302 Gene3D G3DSA:3.30.1490.20 115 181 6.8E-27 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Patl_2779 07cee23f02e5d11bdcda3ad64d2e34f5 302 Gene3D G3DSA:3.40.50.20 1 114 2.7E-40 T 11-10-2018 Patl_2779 07cee23f02e5d11bdcda3ad64d2e34f5 302 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 51.318 T 11-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK Patl_2779 07cee23f02e5d11bdcda3ad64d2e34f5 302 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 3.4E-82 T 11-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 Patl_2779 07cee23f02e5d11bdcda3ad64d2e34f5 302 Pfam PF08443 RimK-like ATP-grasp domain 98 286 1.2E-63 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 Patl_0006 ab68617ca34402463ab2b2e6b4545aec 535 Gene3D G3DSA:3.30.70.270 361 535 4.5E-44 T 11-10-2018 Patl_0006 ab68617ca34402463ab2b2e6b4545aec 535 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 365 528 3.7E-35 T 11-10-2018 IPR000160 GGDEF domain Patl_0006 ab68617ca34402463ab2b2e6b4545aec 535 Gene3D G3DSA:1.20.1480.50 130 225 4.6E-6 T 11-10-2018 Patl_0006 ab68617ca34402463ab2b2e6b4545aec 535 SUPERFAMILY SSF55073 371 532 5.73E-37 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_0006 ab68617ca34402463ab2b2e6b4545aec 535 Pfam PF00990 Diguanylate cyclase, GGDEF domain 366 525 6.9E-37 T 11-10-2018 IPR000160 GGDEF domain Patl_0006 ab68617ca34402463ab2b2e6b4545aec 535 Pfam PF13188 PAS domain 235 266 7.5E-4 T 11-10-2018 IPR000014 PAS domain Patl_0006 ab68617ca34402463ab2b2e6b4545aec 535 Gene3D G3DSA:3.30.450.20 226 360 4.3E-5 T 11-10-2018 Patl_0006 ab68617ca34402463ab2b2e6b4545aec 535 SMART SM00267 353 530 1.4E-41 T 11-10-2018 IPR000160 GGDEF domain Patl_1912 85d9a5dd2ddea8251251dfadf7c9c53a 863 SUPERFAMILY SSF55486 227 469 7.77E-70 T 11-10-2018 Patl_1912 85d9a5dd2ddea8251251dfadf7c9c53a 863 Pfam PF01433 Peptidase family M1 domain 231 459 3.7E-70 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_1912 85d9a5dd2ddea8251251dfadf7c9c53a 863 Gene3D G3DSA:1.25.50.20 544 861 1.2E-17 T 11-10-2018 Patl_1912 85d9a5dd2ddea8251251dfadf7c9c53a 863 Gene3D G3DSA:2.60.40.1730 21 220 3.7E-50 T 11-10-2018 Patl_1912 85d9a5dd2ddea8251251dfadf7c9c53a 863 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 203 218 4.6E-24 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_1912 85d9a5dd2ddea8251251dfadf7c9c53a 863 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 334 346 4.6E-24 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_1912 85d9a5dd2ddea8251251dfadf7c9c53a 863 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 315 330 4.6E-24 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_1912 85d9a5dd2ddea8251251dfadf7c9c53a 863 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 280 290 4.6E-24 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_1912 85d9a5dd2ddea8251251dfadf7c9c53a 863 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 156 171 4.6E-24 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_1912 85d9a5dd2ddea8251251dfadf7c9c53a 863 Gene3D G3DSA:2.60.40.1910 465 543 5.4E-5 T 11-10-2018 Patl_1912 85d9a5dd2ddea8251251dfadf7c9c53a 863 Pfam PF11838 ERAP1-like C-terminal domain 529 836 4.5E-26 T 11-10-2018 IPR024571 ERAP1-like C-terminal domain Patl_1912 85d9a5dd2ddea8251251dfadf7c9c53a 863 SUPERFAMILY SSF63737 26 220 1.57E-43 T 11-10-2018 Patl_1912 85d9a5dd2ddea8251251dfadf7c9c53a 863 Gene3D G3DSA:1.10.390.60 224 464 2.1E-79 T 11-10-2018 Patl_1957 f5acdba89c2853784f180c4d86733d09 423 SUPERFAMILY SSF54373 256 356 1.57E-24 T 11-10-2018 Patl_1957 f5acdba89c2853784f180c4d86733d09 423 SUPERFAMILY SSF51905 3 418 1.23E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1957 f5acdba89c2853784f180c4d86733d09 423 Pfam PF01593 Flavin containing amine oxidoreductase 123 412 4.3E-14 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Patl_1957 f5acdba89c2853784f180c4d86733d09 423 Gene3D G3DSA:3.50.50.60 2 203 1.4E-24 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1957 f5acdba89c2853784f180c4d86733d09 423 Gene3D G3DSA:3.50.50.60 204 420 5.4E-39 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1957 f5acdba89c2853784f180c4d86733d09 423 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 89 1.0E-7 T 11-10-2018 Patl_0737 93d2997c8deb33d2ce069c7a10cce813 364 Pfam PF12706 Beta-lactamase superfamily domain 118 310 9.1E-42 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_0737 93d2997c8deb33d2ce069c7a10cce813 364 Gene3D G3DSA:3.60.15.10 75 359 4.8E-81 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_0737 93d2997c8deb33d2ce069c7a10cce813 364 SUPERFAMILY SSF56281 97 327 9.57E-35 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_1561 478709d32994acfa1db334797040266e 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 7.5E-46 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Patl_1561 478709d32994acfa1db334797040266e 156 SUPERFAMILY SSF75217 1 154 1.15E-48 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Patl_1561 478709d32994acfa1db334797040266e 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 5.8E-72 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Patl_1561 478709d32994acfa1db334797040266e 156 Gene3D G3DSA:3.40.1280.10 1 156 5.2E-49 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Patl_1561 478709d32994acfa1db334797040266e 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.12 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Patl_1561 478709d32994acfa1db334797040266e 156 PIRSF PIRSF004505 1 155 1.9E-39 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Patl_1435 854f827190462a9ac5d7d44bd6ac8577 123 Gene3D G3DSA:3.10.180.10 2 123 2.4E-11 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_1435 854f827190462a9ac5d7d44bd6ac8577 123 SUPERFAMILY SSF54593 7 122 2.29E-17 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_1435 854f827190462a9ac5d7d44bd6ac8577 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 116 2.8E-4 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Patl_3648 9e72f92d6b1dade4ffa0ea094785b4b1 399 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 396 4.6E-152 T 11-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Patl_3648 9e72f92d6b1dade4ffa0ea094785b4b1 399 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 399 185.937 T 11-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Patl_3648 9e72f92d6b1dade4ffa0ea094785b4b1 399 PIRSF PIRSF016049 1 399 4.6E-171 T 11-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Patl_3648 9e72f92d6b1dade4ffa0ea094785b4b1 399 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 396 1.9E-128 T 11-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 Patl_3648 9e72f92d6b1dade4ffa0ea094785b4b1 399 SUPERFAMILY SSF51658 1 393 2.12E-65 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily Patl_2452 4cc606fb8316d31f9081d1d36cbd4eef 129 SUPERFAMILY SSF75169 1 129 5.69E-34 T 11-10-2018 IPR027396 DsrEFH-like Patl_2452 4cc606fb8316d31f9081d1d36cbd4eef 129 Pfam PF02635 DsrE/DsrF-like family 3 129 1.5E-26 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Patl_2452 4cc606fb8316d31f9081d1d36cbd4eef 129 Gene3D G3DSA:3.40.1260.10 1 129 8.5E-44 T 11-10-2018 IPR027396 DsrEFH-like Patl_2452 4cc606fb8316d31f9081d1d36cbd4eef 129 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 4 129 1.6E-41 T 11-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 Patl_4300 e7bc2c19a7052f607080e19d67d2ba84 82 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 73 14.727 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4300 e7bc2c19a7052f607080e19d67d2ba84 82 ProSitePatterns PS00605 ATP synthase c subunit signature. 38 59 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4300 e7bc2c19a7052f607080e19d67d2ba84 82 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 74 4.1E-29 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Patl_4300 e7bc2c19a7052f607080e19d67d2ba84 82 Pfam PF00137 ATP synthase subunit C 9 72 4.4E-12 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Patl_4300 e7bc2c19a7052f607080e19d67d2ba84 82 SUPERFAMILY SSF81333 4 74 2.22E-19 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Patl_4300 e7bc2c19a7052f607080e19d67d2ba84 82 Gene3D G3DSA:1.20.20.10 2 76 1.2E-28 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4300 e7bc2c19a7052f607080e19d67d2ba84 82 PRINTS PR00124 ATP synthase C subunit signature 48 73 2.2E-8 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4300 e7bc2c19a7052f607080e19d67d2ba84 82 PRINTS PR00124 ATP synthase C subunit signature 31 46 2.2E-8 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4300 e7bc2c19a7052f607080e19d67d2ba84 82 PRINTS PR00124 ATP synthase C subunit signature 10 29 2.2E-8 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_0251 5689c21c4e0bb735b62361e63718f6b2 478 SUPERFAMILY SSF48024 32 143 4.18E-39 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Patl_0251 5689c21c4e0bb735b62361e63718f6b2 478 Gene3D G3DSA:3.40.50.300 191 471 4.4E-105 T 11-10-2018 Patl_0251 5689c21c4e0bb735b62361e63718f6b2 478 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 34 470 8.4E-174 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Patl_0251 5689c21c4e0bb735b62361e63718f6b2 478 Gene3D G3DSA:1.10.860.10 26 190 2.1E-55 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Patl_0251 5689c21c4e0bb735b62361e63718f6b2 478 SUPERFAMILY SSF52540 210 461 1.19E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0251 5689c21c4e0bb735b62361e63718f6b2 478 SMART SM00382 229 435 3.1E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0251 5689c21c4e0bb735b62361e63718f6b2 478 Pfam PF03796 DnaB-like helicase C terminal domain 212 468 8.1E-111 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Patl_0251 5689c21c4e0bb735b62361e63718f6b2 478 Pfam PF00772 DnaB-like helicase N terminal domain 34 135 8.3E-37 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Patl_3307 96f2014b745d29d7a3b10d3042c44b2c 449 SUPERFAMILY SSF53474 66 406 3.77E-31 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3307 96f2014b745d29d7a3b10d3042c44b2c 449 Gene3D G3DSA:3.40.50.1820 45 414 3.8E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3307 96f2014b745d29d7a3b10d3042c44b2c 449 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 129 178 2.4E-7 T 11-10-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 Patl_1191 16346106b12bc5c4c422f37b5dbf0218 384 SUPERFAMILY SSF53756 1 383 1.02E-80 T 11-10-2018 Patl_1191 16346106b12bc5c4c422f37b5dbf0218 384 Pfam PF00534 Glycosyl transferases group 1 196 362 2.7E-44 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Patl_1191 16346106b12bc5c4c422f37b5dbf0218 384 Gene3D G3DSA:3.40.50.2000 5 179 3.6E-100 T 11-10-2018 Patl_1191 16346106b12bc5c4c422f37b5dbf0218 384 Pfam PF13439 Glycosyltransferase Family 4 35 182 2.9E-14 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Patl_1191 16346106b12bc5c4c422f37b5dbf0218 384 Gene3D G3DSA:3.40.50.2000 180 370 3.6E-100 T 11-10-2018 Patl_4199 6a4a79096b16c2f60553bec5c6da6154 459 Pfam PF11860 N-acetylmuramidase 270 448 9.2E-45 T 11-10-2018 IPR024408 N-acetylmuramidase Patl_4199 6a4a79096b16c2f60553bec5c6da6154 459 Pfam PF08239 Bacterial SH3 domain 9 58 7.1E-7 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type Patl_4199 6a4a79096b16c2f60553bec5c6da6154 459 Pfam PF08239 Bacterial SH3 domain 140 190 4.3E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type Patl_4199 6a4a79096b16c2f60553bec5c6da6154 459 Gene3D G3DSA:2.30.30.40 2 62 7.0E-11 T 11-10-2018 Patl_4199 6a4a79096b16c2f60553bec5c6da6154 459 Gene3D G3DSA:2.30.30.40 130 192 1.7E-12 T 11-10-2018 Patl_4199 6a4a79096b16c2f60553bec5c6da6154 459 Gene3D G3DSA:2.30.30.40 66 129 4.0E-8 T 11-10-2018 Patl_4199 6a4a79096b16c2f60553bec5c6da6154 459 SMART SM00287 5 61 2.7 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type Patl_4199 6a4a79096b16c2f60553bec5c6da6154 459 SMART SM00287 66 127 0.0011 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type Patl_4199 6a4a79096b16c2f60553bec5c6da6154 459 SMART SM00287 132 194 6.0E-7 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type Patl_0279 c072a84fc6d12370931f48ea4f246c3d 345 SUPERFAMILY SSF53187 41 342 1.36E-47 T 11-10-2018 Patl_0279 c072a84fc6d12370931f48ea4f246c3d 345 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 62 343 2.1E-38 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Patl_0279 c072a84fc6d12370931f48ea4f246c3d 345 Gene3D G3DSA:3.40.630.10 32 345 1.2E-78 T 11-10-2018 Patl_0279 c072a84fc6d12370931f48ea4f246c3d 345 PIRSF PIRSF039012 17 345 1.6E-91 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Patl_3913 c956dd00acd24052caa412e7a4dd0c74 234 Pfam PF04286 Protein of unknown function (DUF445) 141 233 1.3E-9 T 11-10-2018 IPR007383 Protein of unknown function DUF445 Patl_1485 d6d6c4c9f5dfa6d516aace1c7644413a 375 Gene3D G3DSA:3.40.640.10 1 374 3.7E-113 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_1485 d6d6c4c9f5dfa6d516aace1c7644413a 375 SUPERFAMILY SSF53383 5 373 3.44E-100 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_1485 d6d6c4c9f5dfa6d516aace1c7644413a 375 Pfam PF00155 Aminotransferase class I and II 16 364 1.3E-60 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Patl_1485 d6d6c4c9f5dfa6d516aace1c7644413a 375 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 217 230 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Patl_1027 c85ef2b103a680ba3e09a51cc1478514 359 Pfam PF00989 PAS fold 8 104 4.3E-9 T 11-10-2018 IPR013767 PAS fold GO:0006355 Patl_1027 c85ef2b103a680ba3e09a51cc1478514 359 Gene3D G3DSA:1.10.287.130 115 191 4.8E-14 T 11-10-2018 Patl_1027 c85ef2b103a680ba3e09a51cc1478514 359 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 351 2.0E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1027 c85ef2b103a680ba3e09a51cc1478514 359 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 188 8.0E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1027 c85ef2b103a680ba3e09a51cc1478514 359 SMART SM00091 5 73 0.0014 T 11-10-2018 IPR000014 PAS domain Patl_1027 c85ef2b103a680ba3e09a51cc1478514 359 SMART SM00388 131 196 2.3E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1027 c85ef2b103a680ba3e09a51cc1478514 359 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 333 3.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1027 c85ef2b103a680ba3e09a51cc1478514 359 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 351 3.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1027 c85ef2b103a680ba3e09a51cc1478514 359 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 300 3.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1027 c85ef2b103a680ba3e09a51cc1478514 359 Gene3D G3DSA:3.30.450.20 6 114 9.2E-17 T 11-10-2018 Patl_1027 c85ef2b103a680ba3e09a51cc1478514 359 Gene3D G3DSA:3.30.565.10 194 353 5.2E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1027 c85ef2b103a680ba3e09a51cc1478514 359 SUPERFAMILY SSF47384 123 188 2.55E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_1027 c85ef2b103a680ba3e09a51cc1478514 359 SUPERFAMILY SSF55874 199 351 7.6E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1027 c85ef2b103a680ba3e09a51cc1478514 359 SMART SM00387 235 354 4.5E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1027 c85ef2b103a680ba3e09a51cc1478514 359 SUPERFAMILY SSF55785 8 107 3.05E-9 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3984 f5a587175362790e7c83f73091bf739e 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 133 198 6.6E-11 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal Patl_3984 f5a587175362790e7c83f73091bf739e 202 SUPERFAMILY SSF52833 1 89 1.89E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_3984 f5a587175362790e7c83f73091bf739e 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 81 8.7E-18 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Patl_3984 f5a587175362790e7c83f73091bf739e 202 Gene3D G3DSA:3.40.30.10 4 199 1.2E-65 T 11-10-2018 Patl_3984 f5a587175362790e7c83f73091bf739e 202 SUPERFAMILY SSF47616 78 202 6.4E-27 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Patl_3984 f5a587175362790e7c83f73091bf739e 202 Gene3D G3DSA:1.20.1050.10 82 197 1.2E-65 T 11-10-2018 Patl_2855 7201eda717fc07e9a8f086d48354bdc8 360 SUPERFAMILY SSF51735 163 332 3.12E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2855 7201eda717fc07e9a8f086d48354bdc8 360 Pfam PF00107 Zinc-binding dehydrogenase 201 321 9.9E-21 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_2855 7201eda717fc07e9a8f086d48354bdc8 360 SMART SM00829 28 357 9.9E-15 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_2855 7201eda717fc07e9a8f086d48354bdc8 360 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 190 211 - T 11-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Patl_2855 7201eda717fc07e9a8f086d48354bdc8 360 SUPERFAMILY SSF50129 15 197 6.39E-35 T 11-10-2018 IPR011032 GroES-like superfamily Patl_2855 7201eda717fc07e9a8f086d48354bdc8 360 Gene3D G3DSA:3.40.50.720 177 330 7.8E-108 T 11-10-2018 Patl_2855 7201eda717fc07e9a8f086d48354bdc8 360 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 47 157 5.9E-13 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_2855 7201eda717fc07e9a8f086d48354bdc8 360 Gene3D G3DSA:3.90.180.10 25 356 7.8E-108 T 11-10-2018 Patl_2108 c95ccdd189382296cd92067c03728d5d 91 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 12 82 2.1E-34 T 11-10-2018 IPR019882 Conserved hypothetical protein CHP03643 Patl_2108 c95ccdd189382296cd92067c03728d5d 91 Pfam PF10985 Protein of unknown function (DUF2805) 14 84 5.1E-32 T 11-10-2018 IPR019882 Conserved hypothetical protein CHP03643 Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 Gene3D G3DSA:3.30.230.80 241 413 8.2E-71 T 11-10-2018 Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 Gene3D G3DSA:3.40.50.11260 414 505 1.5E-34 T 11-10-2018 Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 SMART SM00387 30 187 1.5E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 Pfam PF00183 Hsp90 protein 225 636 9.3E-134 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 SUPERFAMILY SSF54211 242 497 2.58E-99 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 PRINTS PR00775 90kDa heat shock protein signature 123 145 4.2E-60 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 PRINTS PR00775 90kDa heat shock protein signature 96 113 4.2E-60 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 PRINTS PR00775 90kDa heat shock protein signature 193 211 4.2E-60 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 PRINTS PR00775 90kDa heat shock protein signature 78 95 4.2E-60 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 PRINTS PR00775 90kDa heat shock protein signature 175 192 4.2E-60 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 PRINTS PR00775 90kDa heat shock protein signature 29 51 4.2E-60 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 PRINTS PR00775 90kDa heat shock protein signature 8 28 4.2E-60 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 PIRSF PIRSF002583 3 640 4.5E-216 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 636 32.659 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 SUPERFAMILY SSF110942 524 636 4.84E-36 T 11-10-2018 IPR037196 HSP90, C-terminal domain Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 SUPERFAMILY SSF55874 7 218 1.57E-65 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 Gene3D G3DSA:1.20.120.790 506 637 7.8E-46 T 11-10-2018 IPR037196 HSP90, C-terminal domain Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 2.3E-12 T 11-10-2018 Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 11-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 Patl_2894 5e327c4e51942a82c8d80c539aaf0f3d 640 Gene3D G3DSA:3.30.565.10 4 218 4.1E-75 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1770 83373e2232ddee40c8732fb08192af68 419 Gene3D G3DSA:3.40.50.2000 196 354 7.2E-11 T 11-10-2018 Patl_1770 83373e2232ddee40c8732fb08192af68 419 Pfam PF13692 Glycosyl transferases group 1 201 339 1.2E-20 T 11-10-2018 Patl_1770 83373e2232ddee40c8732fb08192af68 419 SUPERFAMILY SSF53756 8 366 1.57E-18 T 11-10-2018 Patl_4014 e7c754ddcd98429a976a80563ca04651 314 SUPERFAMILY SSF53850 94 302 6.88E-36 T 11-10-2018 Patl_4014 e7c754ddcd98429a976a80563ca04651 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 1.3E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_4014 e7c754ddcd98429a976a80563ca04651 314 Gene3D G3DSA:1.10.10.10 3 91 5.4E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_4014 e7c754ddcd98429a976a80563ca04651 314 SUPERFAMILY SSF46785 9 94 8.88E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_4014 e7c754ddcd98429a976a80563ca04651 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.0E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_4014 e7c754ddcd98429a976a80563ca04651 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.0E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_4014 e7c754ddcd98429a976a80563ca04651 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.0E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_4014 e7c754ddcd98429a976a80563ca04651 314 Gene3D G3DSA:3.40.190.10 168 269 3.1E-49 T 11-10-2018 Patl_4014 e7c754ddcd98429a976a80563ca04651 314 Pfam PF03466 LysR substrate binding domain 94 298 4.7E-38 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_4014 e7c754ddcd98429a976a80563ca04651 314 Gene3D G3DSA:3.40.190.10 100 295 3.1E-49 T 11-10-2018 Patl_4031 309c908cc919fbc0bd6d59a8716c2fe3 199 Gene3D G3DSA:1.10.10.60 1 51 6.9E-23 T 11-10-2018 Patl_4031 309c908cc919fbc0bd6d59a8716c2fe3 199 SUPERFAMILY SSF46689 10 69 3.5E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_4031 309c908cc919fbc0bd6d59a8716c2fe3 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 2.8E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_4031 309c908cc919fbc0bd6d59a8716c2fe3 199 Gene3D G3DSA:1.10.357.10 52 198 1.7E-34 T 11-10-2018 Patl_3912 380c250433ff847e10ea118cabee4540 548 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 287 442 6.8E-29 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_3912 380c250433ff847e10ea118cabee4540 548 Gene3D G3DSA:2.40.110.20 133 287 5.6E-57 T 11-10-2018 Patl_3912 380c250433ff847e10ea118cabee4540 548 SUPERFAMILY SSF56645 80 296 2.4E-33 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_3912 380c250433ff847e10ea118cabee4540 548 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 183 276 2.5E-13 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Patl_3912 380c250433ff847e10ea118cabee4540 548 Gene3D G3DSA:1.20.140.10 288 444 4.7E-35 T 11-10-2018 Patl_3912 380c250433ff847e10ea118cabee4540 548 SUPERFAMILY SSF47203 292 447 1.1E-38 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_3887 5930b10f3b3dafa888f6d188cb99317c 302 Gene3D G3DSA:3.20.20.140 4 299 1.6E-80 T 11-10-2018 Patl_3887 5930b10f3b3dafa888f6d188cb99317c 302 Pfam PF04909 Amidohydrolase 29 294 7.2E-43 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Patl_3887 5930b10f3b3dafa888f6d188cb99317c 302 SUPERFAMILY SSF51556 25 294 4.91E-74 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_1214 c3a67005ec358e886ad49e9257633e97 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 5.0E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1214 c3a67005ec358e886ad49e9257633e97 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1214 c3a67005ec358e886ad49e9257633e97 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1214 c3a67005ec358e886ad49e9257633e97 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1214 c3a67005ec358e886ad49e9257633e97 314 Gene3D G3DSA:3.40.190.10 170 279 6.5E-55 T 11-10-2018 Patl_1214 c3a67005ec358e886ad49e9257633e97 314 SUPERFAMILY SSF46785 2 83 5.44E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1214 c3a67005ec358e886ad49e9257633e97 314 Gene3D G3DSA:1.10.10.10 1 87 3.9E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1214 c3a67005ec358e886ad49e9257633e97 314 Pfam PF03466 LysR substrate binding domain 95 304 5.4E-14 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_1214 c3a67005ec358e886ad49e9257633e97 314 Gene3D G3DSA:3.40.190.10 90 304 6.5E-55 T 11-10-2018 Patl_1214 c3a67005ec358e886ad49e9257633e97 314 SUPERFAMILY SSF53850 90 307 8.69E-36 T 11-10-2018 Patl_4254 54d0572bc12687ab7c64cd759eb4ac06 284 SUPERFAMILY SSF53850 88 283 5.43E-35 T 11-10-2018 Patl_4254 54d0572bc12687ab7c64cd759eb4ac06 284 Pfam PF03466 LysR substrate binding domain 87 282 3.9E-39 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_4254 54d0572bc12687ab7c64cd759eb4ac06 284 Gene3D G3DSA:3.40.190.10 90 274 1.5E-31 T 11-10-2018 Patl_4254 54d0572bc12687ab7c64cd759eb4ac06 284 Gene3D G3DSA:1.10.10.10 1 84 7.5E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_4254 54d0572bc12687ab7c64cd759eb4ac06 284 Gene3D G3DSA:3.40.190.10 165 261 1.5E-31 T 11-10-2018 Patl_4254 54d0572bc12687ab7c64cd759eb4ac06 284 SUPERFAMILY SSF46785 1 85 2.44E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_4254 54d0572bc12687ab7c64cd759eb4ac06 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.7E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0997 288045d1ea6c3ff77d8702a8ad54bff7 297 Gene3D G3DSA:3.40.190.10 102 288 3.8E-49 T 11-10-2018 Patl_0997 288045d1ea6c3ff77d8702a8ad54bff7 297 SUPERFAMILY SSF46785 3 81 1.18E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0997 288045d1ea6c3ff77d8702a8ad54bff7 297 SUPERFAMILY SSF53850 94 296 3.08E-33 T 11-10-2018 Patl_0997 288045d1ea6c3ff77d8702a8ad54bff7 297 Gene3D G3DSA:1.10.10.10 6 86 3.8E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0997 288045d1ea6c3ff77d8702a8ad54bff7 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.7E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0997 288045d1ea6c3ff77d8702a8ad54bff7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0997 288045d1ea6c3ff77d8702a8ad54bff7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0997 288045d1ea6c3ff77d8702a8ad54bff7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0997 288045d1ea6c3ff77d8702a8ad54bff7 297 Gene3D G3DSA:3.40.190.10 162 261 3.8E-49 T 11-10-2018 Patl_0997 288045d1ea6c3ff77d8702a8ad54bff7 297 Pfam PF03466 LysR substrate binding domain 95 289 6.2E-30 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_0812 1652a7f18cf59fb2950bc259623655f8 430 SUPERFAMILY SSF75005 108 424 2.02E-36 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Patl_0812 1652a7f18cf59fb2950bc259623655f8 430 Gene3D G3DSA:2.115.10.20 39 413 6.7E-115 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Patl_3934 63687ed581a67243cdd9f949a6ff0bed 162 Gene3D G3DSA:3.30.70.560 2 158 5.3E-55 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Patl_3934 63687ed581a67243cdd9f949a6ff0bed 162 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Patl_3934 63687ed581a67243cdd9f949a6ff0bed 162 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 2.9E-36 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Patl_3934 63687ed581a67243cdd9f949a6ff0bed 162 SUPERFAMILY SSF55083 1 156 2.22E-50 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Patl_3934 63687ed581a67243cdd9f949a6ff0bed 162 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 5.8E-43 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Patl_1628 2ae4e56593a74f023b79ee73c8168a67 509 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.3E-97 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Patl_1628 2ae4e56593a74f023b79ee73c8168a67 509 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 285 2.0E-61 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Patl_1628 2ae4e56593a74f023b79ee73c8168a67 509 Gene3D G3DSA:3.20.130.10 309 491 4.1E-60 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Patl_1628 2ae4e56593a74f023b79ee73c8168a67 509 Pfam PF05683 Fumarase C-terminus 289 491 1.7E-82 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Patl_1628 2ae4e56593a74f023b79ee73c8168a67 509 SUPERFAMILY SSF117457 317 490 3.53E-63 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Patl_1628 2ae4e56593a74f023b79ee73c8168a67 509 PIRSF PIRSF001394 1 508 1.2E-214 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 Patl_1628 2ae4e56593a74f023b79ee73c8168a67 509 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 3.6E-49 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Patl_2612 7f0fe423df8d24a9b6961b9b60091847 113 Gene3D G3DSA:3.30.429.10 1 112 4.4E-26 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily Patl_2612 7f0fe423df8d24a9b6961b9b60091847 113 SUPERFAMILY SSF55331 2 109 1.31E-20 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily Patl_3888 e9f2e65e182569a022d831a766433d4c 339 Pfam PF04909 Amidohydrolase 3 328 1.9E-64 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Patl_3888 e9f2e65e182569a022d831a766433d4c 339 SUPERFAMILY SSF51556 1 329 2.86E-96 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_3888 e9f2e65e182569a022d831a766433d4c 339 Gene3D G3DSA:3.20.20.140 1 338 1.3E-93 T 11-10-2018 Patl_1929 2e2690c2305b71d48e6a3abc175e6cdb 206 Gene3D G3DSA:1.10.357.10 11 197 4.2E-39 T 11-10-2018 Patl_1929 2e2690c2305b71d48e6a3abc175e6cdb 206 SUPERFAMILY SSF46689 12 79 2.96E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1929 2e2690c2305b71d48e6a3abc175e6cdb 206 Pfam PF13305 WHG domain 91 175 8.9E-14 T 11-10-2018 IPR025996 WHG domain Patl_1929 2e2690c2305b71d48e6a3abc175e6cdb 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 63 1.2E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_1929 2e2690c2305b71d48e6a3abc175e6cdb 206 SUPERFAMILY SSF48498 88 194 2.28E-22 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Patl_3957 4873f60686b30a95ff706ff1d3017545 221 SUPERFAMILY SSF52833 1 77 1.68E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_3957 4873f60686b30a95ff706ff1d3017545 221 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 75 1.1E-14 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Patl_3957 4873f60686b30a95ff706ff1d3017545 221 Gene3D G3DSA:3.40.30.10 1 82 8.7E-34 T 11-10-2018 Patl_3957 4873f60686b30a95ff706ff1d3017545 221 Gene3D G3DSA:1.20.1050.10 84 211 6.7E-31 T 11-10-2018 Patl_3957 4873f60686b30a95ff706ff1d3017545 221 Pfam PF00043 Glutathione S-transferase, C-terminal domain 150 206 1.6E-8 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal Patl_3957 4873f60686b30a95ff706ff1d3017545 221 SUPERFAMILY SSF47616 82 212 1.81E-21 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Patl_0002 056822828fe8cb9fa64c70a13a8c5b4e 367 SMART SM00480 17 363 5.8E-146 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Patl_0002 056822828fe8cb9fa64c70a13a8c5b4e 367 PIRSF PIRSF000804 1 367 5.5E-122 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Patl_0002 056822828fe8cb9fa64c70a13a8c5b4e 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 367 2.3E-114 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Patl_0002 056822828fe8cb9fa64c70a13a8c5b4e 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 244 6.4E-36 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Patl_0002 056822828fe8cb9fa64c70a13a8c5b4e 367 SUPERFAMILY SSF55979 125 245 4.59E-30 T 11-10-2018 Patl_0002 056822828fe8cb9fa64c70a13a8c5b4e 367 SUPERFAMILY SSF55979 246 367 2.46E-38 T 11-10-2018 Patl_0002 056822828fe8cb9fa64c70a13a8c5b4e 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 366 1.6E-40 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Patl_0002 056822828fe8cb9fa64c70a13a8c5b4e 367 Gene3D G3DSA:3.10.150.10 125 248 1.5E-36 T 11-10-2018 Patl_0002 056822828fe8cb9fa64c70a13a8c5b4e 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.8E-37 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Patl_0002 056822828fe8cb9fa64c70a13a8c5b4e 367 SUPERFAMILY SSF55979 1 118 2.47E-30 T 11-10-2018 Patl_0002 056822828fe8cb9fa64c70a13a8c5b4e 367 Gene3D G3DSA:3.10.150.10 1 123 4.1E-43 T 11-10-2018 Patl_0002 056822828fe8cb9fa64c70a13a8c5b4e 367 Gene3D G3DSA:3.10.150.10 249 367 6.0E-41 T 11-10-2018 Patl_2644 5c858c301a67d9c66c7b4896ab159591 334 SUPERFAMILY SSF53613 1 322 6.08E-63 T 11-10-2018 IPR029056 Ribokinase-like Patl_2644 5c858c301a67d9c66c7b4896ab159591 334 Pfam PF00294 pfkB family carbohydrate kinase 263 313 2.1E-6 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB Patl_2644 5c858c301a67d9c66c7b4896ab159591 334 Pfam PF00294 pfkB family carbohydrate kinase 3 197 5.6E-23 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB Patl_2644 5c858c301a67d9c66c7b4896ab159591 334 Gene3D G3DSA:3.40.1190.20 1 333 1.9E-104 T 11-10-2018 IPR029056 Ribokinase-like Patl_2084 18d02b327f07f961f5b4d34406cd70c0 439 Gene3D G3DSA:3.90.550.10 5 292 7.6E-85 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_2084 18d02b327f07f961f5b4d34406cd70c0 439 Gene3D G3DSA:2.160.10.10 293 423 2.4E-37 T 11-10-2018 Patl_2084 18d02b327f07f961f5b4d34406cd70c0 439 SUPERFAMILY SSF53448 13 369 1.36E-75 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_2084 18d02b327f07f961f5b4d34406cd70c0 439 Pfam PF00483 Nucleotidyl transferase 18 282 2.6E-64 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Patl_2084 18d02b327f07f961f5b4d34406cd70c0 439 SUPERFAMILY SSF51161 305 414 2.77E-16 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Patl_2084 18d02b327f07f961f5b4d34406cd70c0 439 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 108 116 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Patl_2084 18d02b327f07f961f5b4d34406cd70c0 439 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 22 41 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Patl_2084 18d02b327f07f961f5b4d34406cd70c0 439 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 13 416 48.148 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Patl_2084 18d02b327f07f961f5b4d34406cd70c0 439 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 16 389 1.8E-147 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Patl_2084 18d02b327f07f961f5b4d34406cd70c0 439 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 207 217 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Patl_0131 c4ad4a7e8071eb8044851ce41687ed07 331 Gene3D G3DSA:3.40.50.10490 1 188 3.4E-45 T 11-10-2018 Patl_0131 c4ad4a7e8071eb8044851ce41687ed07 331 Pfam PF01380 SIS domain 41 163 1.9E-15 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Patl_0131 c4ad4a7e8071eb8044851ce41687ed07 331 Pfam PF01380 SIS domain 200 281 2.0E-6 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Patl_0131 c4ad4a7e8071eb8044851ce41687ed07 331 SUPERFAMILY SSF53697 4 328 6.15E-56 T 11-10-2018 Patl_0131 c4ad4a7e8071eb8044851ce41687ed07 331 Gene3D G3DSA:3.40.50.10490 191 316 6.2E-36 T 11-10-2018 Patl_1444 88c5b38de20493521bf5fa8bde506ab5 396 Pfam PF03929 PepSY-associated TM region 13 364 6.9E-57 T 11-10-2018 IPR005625 PepSY-associated TM protein Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 PRINTS PR00701 60kDa inner membrane protein signature 2 23 3.3E-86 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 PRINTS PR00701 60kDa inner membrane protein signature 165 185 3.3E-86 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 PRINTS PR00701 60kDa inner membrane protein signature 251 266 3.3E-86 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 PRINTS PR00701 60kDa inner membrane protein signature 324 344 3.3E-86 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 PRINTS PR00701 60kDa inner membrane protein signature 218 236 3.3E-86 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 PRINTS PR00701 60kDa inner membrane protein signature 78 99 3.3E-86 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 PRINTS PR00701 60kDa inner membrane protein signature 462 484 3.3E-86 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 PRINTS PR00701 60kDa inner membrane protein signature 499 522 3.3E-86 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 PRINTS PR00701 60kDa inner membrane protein signature 415 438 3.3E-86 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 Pfam PF14849 YidC periplasmic domain 73 342 5.2E-78 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 PRINTS PR01900 YidC translocation/secretion protein signature 468 483 4.9E-22 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 PRINTS PR01900 YidC translocation/secretion protein signature 339 355 4.9E-22 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 PRINTS PR01900 YidC translocation/secretion protein signature 488 512 4.9E-22 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 352 1.4E-110 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 Pfam PF02096 60Kd inner membrane protein 354 532 7.4E-59 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 Gene3D G3DSA:2.70.98.90 69 333 1.8E-89 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 535 24.083 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 Patl_4312 55cbcf0b8329ca363beed19b3e24b076 543 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 353 532 4.7E-68 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1613 3485771d03039c0a914723b1ea560f42 374 Pfam PF12698 ABC-2 family transporter protein 22 363 4.0E-36 T 11-10-2018 Patl_1613 3485771d03039c0a914723b1ea560f42 374 Gene3D G3DSA:3.40.1710.10 40 150 3.1E-5 T 11-10-2018 Patl_2172 989ae7d625329a5ebe1cdd11729c6311 476 Gene3D G3DSA:3.30.420.10 2 196 3.9E-67 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Patl_2172 989ae7d625329a5ebe1cdd11729c6311 476 Pfam PF08411 Exonuclease C-terminal 207 475 1.3E-96 T 11-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 Patl_2172 989ae7d625329a5ebe1cdd11729c6311 476 Gene3D G3DSA:1.20.1280.70 355 416 2.8E-19 T 11-10-2018 Patl_2172 989ae7d625329a5ebe1cdd11729c6311 476 Pfam PF00929 Exonuclease 8 186 1.2E-21 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Patl_2172 989ae7d625329a5ebe1cdd11729c6311 476 SUPERFAMILY SSF53098 6 475 1.66E-124 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_2172 989ae7d625329a5ebe1cdd11729c6311 476 PIRSF PIRSF000977 1 476 1.4E-196 T 11-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 Patl_2172 989ae7d625329a5ebe1cdd11729c6311 476 Gene3D G3DSA:2.30.30.450 209 349 4.2E-48 T 11-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily Patl_2128 a13d6b9d13fe3c3abc37051c4cc29ac9 194 SUPERFAMILY SSF52972 1 184 6.54E-53 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Patl_2128 a13d6b9d13fe3c3abc37051c4cc29ac9 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 183 1.7E-49 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Patl_2128 a13d6b9d13fe3c3abc37051c4cc29ac9 194 Hamap MF_00528 Septum formation protein Maf [maf]. 2 189 28.415 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Patl_2128 a13d6b9d13fe3c3abc37051c4cc29ac9 194 PIRSF PIRSF006305 1 191 4.3E-43 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Patl_2128 a13d6b9d13fe3c3abc37051c4cc29ac9 194 Gene3D G3DSA:3.90.950.10 1 190 1.5E-55 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Patl_2128 a13d6b9d13fe3c3abc37051c4cc29ac9 194 Pfam PF02545 Maf-like protein 2 184 1.8E-43 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 Patl_1141 ba3692f45ce9ec2c0429a6bdaec843e2 303 Gene3D G3DSA:3.40.50.300 6 257 7.5E-62 T 11-10-2018 Patl_1141 ba3692f45ce9ec2c0429a6bdaec843e2 303 SUPERFAMILY SSF52540 5 234 4.13E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1141 ba3692f45ce9ec2c0429a6bdaec843e2 303 SMART SM00382 31 218 2.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1141 ba3692f45ce9ec2c0429a6bdaec843e2 303 Pfam PF00005 ABC transporter 22 170 2.0E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_3818 454766f7f962479ab7052c6eaabf1073 974 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 37 973 1.5E-139 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor Patl_3818 454766f7f962479ab7052c6eaabf1073 974 Gene3D G3DSA:2.170.130.10 44 162 5.3E-12 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_3818 454766f7f962479ab7052c6eaabf1073 974 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 158 7.2E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3818 454766f7f962479ab7052c6eaabf1073 974 SUPERFAMILY SSF56935 27 973 5.5E-70 T 11-10-2018 Patl_0138 a605bdf2bb7ed93b11896c6a1d8ea6a6 187 SUPERFAMILY SSF55811 5 185 5.69E-39 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Patl_0138 a605bdf2bb7ed93b11896c6a1d8ea6a6 187 ProSitePatterns PS00893 Nudix box signature. 84 105 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Patl_0138 a605bdf2bb7ed93b11896c6a1d8ea6a6 187 Gene3D G3DSA:3.90.79.10 11 187 1.0E-46 T 11-10-2018 Patl_0138 a605bdf2bb7ed93b11896c6a1d8ea6a6 187 Pfam PF00293 NUDIX domain 51 159 4.0E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Patl_3016 101fd826690283201126c2bb22facc2c 155 Hamap MF_01114 Regulatory protein RecX [recX]. 2 155 11.172 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Patl_3016 101fd826690283201126c2bb22facc2c 155 Gene3D G3DSA:1.10.10.10 62 105 1.2E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3016 101fd826690283201126c2bb22facc2c 155 Gene3D G3DSA:1.10.10.10 18 60 1.6E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3016 101fd826690283201126c2bb22facc2c 155 Gene3D G3DSA:1.10.10.10 107 154 3.9E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3016 101fd826690283201126c2bb22facc2c 155 Pfam PF02631 RecX family 37 151 3.3E-24 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 Patl_2130 2252f3c385c3f447d5cc4cff764741db 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 175 2.6E-70 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Patl_2130 2252f3c385c3f447d5cc4cff764741db 182 Gene3D G3DSA:2.60.120.10 1 182 2.1E-69 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_2130 2252f3c385c3f447d5cc4cff764741db 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 177 1.1E-72 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Patl_2130 2252f3c385c3f447d5cc4cff764741db 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 179 6.0E-104 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Patl_2130 2252f3c385c3f447d5cc4cff764741db 182 SUPERFAMILY SSF51182 1 179 4.08E-74 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_2845 cdde32c6ddcd657d6c07a33947566ebe 287 Pfam PF02634 FdhD/NarQ family 10 286 1.4E-56 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Patl_2845 cdde32c6ddcd657d6c07a33947566ebe 287 PIRSF PIRSF015626 2 287 2.8E-53 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Patl_2845 cdde32c6ddcd657d6c07a33947566ebe 287 Gene3D G3DSA:3.40.140.10 126 287 3.1E-42 T 11-10-2018 Patl_2845 cdde32c6ddcd657d6c07a33947566ebe 287 SUPERFAMILY SSF53927 3 287 2.65E-50 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Patl_1562 68df824f724213e3c1b406686c667ba7 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 5.0E-36 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Patl_1562 68df824f724213e3c1b406686c667ba7 105 SUPERFAMILY SSF81301 2 105 5.4E-36 T 11-10-2018 Patl_1562 68df824f724213e3c1b406686c667ba7 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 4.3E-25 T 11-10-2018 Patl_1562 68df824f724213e3c1b406686c667ba7 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 23.335 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Patl_1562 68df824f724213e3c1b406686c667ba7 105 Gene3D G3DSA:3.30.460.10 1 105 8.6E-35 T 11-10-2018 Patl_3308 b7247b8e0edffd1cc9a2204ad8d3a724 147 Gene3D G3DSA:3.10.129.10 5 147 1.6E-32 T 11-10-2018 Patl_3308 b7247b8e0edffd1cc9a2204ad8d3a724 147 Pfam PF03061 Thioesterase superfamily 56 132 4.2E-8 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Patl_3308 b7247b8e0edffd1cc9a2204ad8d3a724 147 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 140 2.7E-18 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 Patl_3308 b7247b8e0edffd1cc9a2204ad8d3a724 147 SUPERFAMILY SSF54637 3 140 1.34E-36 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_0561 1fac3f5b166f57faae5d7966db3c065c 265 SUPERFAMILY SSF52540 4 233 2.35E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0561 1fac3f5b166f57faae5d7966db3c065c 265 SMART SM00382 29 224 3.7E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0561 1fac3f5b166f57faae5d7966db3c065c 265 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_0561 1fac3f5b166f57faae5d7966db3c065c 265 Gene3D G3DSA:3.40.50.300 1 249 5.9E-62 T 11-10-2018 Patl_0561 1fac3f5b166f57faae5d7966db3c065c 265 Pfam PF00005 ABC transporter 20 169 2.7E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1851 c421c633af72abfc1032bbb235d63de1 304 Pfam PF06439 Domain of Unknown Function (DUF1080) 62 301 2.8E-32 T 11-10-2018 IPR010496 Domain of unknown function DUF1080 Patl_1851 c421c633af72abfc1032bbb235d63de1 304 Gene3D G3DSA:2.60.120.560 60 304 1.7E-37 T 11-10-2018 Patl_1288 dca9fdfb5ec1980a9e6139bad1a591f9 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 64 8.2E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_1288 dca9fdfb5ec1980a9e6139bad1a591f9 211 SUPERFAMILY SSF46689 12 79 2.22E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1288 dca9fdfb5ec1980a9e6139bad1a591f9 211 Gene3D G3DSA:1.10.357.10 7 189 6.4E-19 T 11-10-2018 Patl_2804 f2a09f83b8b25bcb17be77741f07d714 552 Pfam PF00501 AMP-binding enzyme 30 459 3.6E-111 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Patl_2804 f2a09f83b8b25bcb17be77741f07d714 552 Gene3D G3DSA:3.30.300.310 455 552 7.7E-30 T 11-10-2018 Patl_2804 f2a09f83b8b25bcb17be77741f07d714 552 Gene3D G3DSA:3.40.50.12780 9 450 4.7E-117 T 11-10-2018 Patl_2804 f2a09f83b8b25bcb17be77741f07d714 552 SUPERFAMILY SSF56801 16 550 7.98E-150 T 11-10-2018 Patl_2804 f2a09f83b8b25bcb17be77741f07d714 552 Pfam PF13193 AMP-binding enzyme C-terminal domain 468 542 1.1E-15 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Patl_2804 f2a09f83b8b25bcb17be77741f07d714 552 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 11-10-2018 IPR020845 AMP-binding, conserved site Patl_0596 e2db36bed11b3e818632e039fe56b797 172 Pfam PF00466 Ribosomal protein L10 6 101 2.1E-24 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Patl_0596 e2db36bed11b3e818632e039fe56b797 172 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 24.431 T 11-10-2018 IPR022973 Ribosomal protein L10 Patl_0596 e2db36bed11b3e818632e039fe56b797 172 SUPERFAMILY SSF160369 6 171 1.31E-46 T 11-10-2018 Patl_0596 e2db36bed11b3e818632e039fe56b797 172 Gene3D G3DSA:3.30.70.1730 6 134 3.8E-28 T 11-10-2018 Patl_0939 57df90aafecb72163d57aebba6e09c06 763 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 186 4.3E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0939 57df90aafecb72163d57aebba6e09c06 763 Pfam PF00593 TonB dependent receptor 290 759 5.4E-39 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0939 57df90aafecb72163d57aebba6e09c06 763 Gene3D G3DSA:2.40.170.20 66 763 2.2E-133 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_0939 57df90aafecb72163d57aebba6e09c06 763 SUPERFAMILY SSF56935 51 763 4.58E-105 T 11-10-2018 Patl_1420 68e565a962aa31a0317c7e4aa28ec1b8 374 SUPERFAMILY SSF48256 9 374 4.58E-128 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Patl_1420 68e565a962aa31a0317c7e4aa28ec1b8 374 ProSitePatterns PS00480 Citrate synthase signature. 257 269 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Patl_1420 68e565a962aa31a0317c7e4aa28ec1b8 374 Gene3D G3DSA:1.10.230.10 223 321 1.1E-120 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Patl_1420 68e565a962aa31a0317c7e4aa28ec1b8 374 Pfam PF00285 Citrate synthase, C-terminal domain 10 356 3.0E-116 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Patl_1420 68e565a962aa31a0317c7e4aa28ec1b8 374 Gene3D G3DSA:1.10.580.10 31 354 1.1E-120 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Patl_1420 68e565a962aa31a0317c7e4aa28ec1b8 374 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 10 374 5.1E-155 T 11-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 Patl_1420 68e565a962aa31a0317c7e4aa28ec1b8 374 PRINTS PR00143 Citrate synthase signature 125 138 2.3E-38 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Patl_1420 68e565a962aa31a0317c7e4aa28ec1b8 374 PRINTS PR00143 Citrate synthase signature 197 225 2.3E-38 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Patl_1420 68e565a962aa31a0317c7e4aa28ec1b8 374 PRINTS PR00143 Citrate synthase signature 175 190 2.3E-38 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Patl_1420 68e565a962aa31a0317c7e4aa28ec1b8 374 PRINTS PR00143 Citrate synthase signature 307 323 2.3E-38 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Patl_1420 68e565a962aa31a0317c7e4aa28ec1b8 374 PRINTS PR00143 Citrate synthase signature 250 270 2.3E-38 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Patl_1420 68e565a962aa31a0317c7e4aa28ec1b8 374 PRINTS PR00143 Citrate synthase signature 327 341 2.3E-38 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 Patl_1420 68e565a962aa31a0317c7e4aa28ec1b8 374 PIRSF PIRSF001369 3 374 1.8E-119 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type Patl_3128 5fd3e341d35bc9f587070ce47af93805 332 Gene3D G3DSA:1.25.40.10 34 250 1.6E-42 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3128 5fd3e341d35bc9f587070ce47af93805 332 Pfam PF13431 Tetratricopeptide repeat 96 127 1.3E-5 T 11-10-2018 Patl_3128 5fd3e341d35bc9f587070ce47af93805 332 SMART SM00028 107 140 35.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3128 5fd3e341d35bc9f587070ce47af93805 332 SMART SM00028 177 210 220.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3128 5fd3e341d35bc9f587070ce47af93805 332 SMART SM00028 39 72 0.0079 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3128 5fd3e341d35bc9f587070ce47af93805 332 SMART SM00028 143 176 3.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3128 5fd3e341d35bc9f587070ce47af93805 332 SMART SM00028 73 106 0.03 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3128 5fd3e341d35bc9f587070ce47af93805 332 SUPERFAMILY SSF48452 31 208 1.14E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3128 5fd3e341d35bc9f587070ce47af93805 332 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 11 242 1.0E-64 T 11-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW Patl_3128 5fd3e341d35bc9f587070ce47af93805 332 Pfam PF14559 Tetratricopeptide repeat 156 204 4.0E-6 T 11-10-2018 Patl_3128 5fd3e341d35bc9f587070ce47af93805 332 Gene3D G3DSA:3.10.350.10 273 332 2.8E-13 T 11-10-2018 IPR036779 LysM domain superfamily Patl_3128 5fd3e341d35bc9f587070ce47af93805 332 Pfam PF01476 LysM domain 286 328 9.7E-11 T 11-10-2018 IPR018392 LysM domain Patl_3128 5fd3e341d35bc9f587070ce47af93805 332 SMART SM00257 285 329 6.6E-10 T 11-10-2018 IPR018392 LysM domain Patl_3128 5fd3e341d35bc9f587070ce47af93805 332 SUPERFAMILY SSF54106 284 328 4.71E-9 T 11-10-2018 Patl_3128 5fd3e341d35bc9f587070ce47af93805 332 Pfam PF13181 Tetratricopeptide repeat 40 71 0.0055 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0168 8e772496cdcfd5b8452799bfc120b044 230 Pfam PF04612 Type II secretion system (T2SS), protein M 14 100 5.4E-11 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 Patl_4037 847561305c352e4431c2ad1f82108b7a 256 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 55 225 4.0E-51 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Patl_4037 847561305c352e4431c2ad1f82108b7a 256 Gene3D G3DSA:3.40.50.620 13 222 3.3E-62 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_4037 847561305c352e4431c2ad1f82108b7a 256 PIRSF PIRSF000857 5 252 7.1E-57 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Patl_4037 847561305c352e4431c2ad1f82108b7a 256 SUPERFAMILY SSF52402 26 214 2.01E-54 T 11-10-2018 Patl_4037 847561305c352e4431c2ad1f82108b7a 256 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 27 248 2.8E-86 T 11-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 Patl_4037 847561305c352e4431c2ad1f82108b7a 256 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 21 249 38.64 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Patl_4037 847561305c352e4431c2ad1f82108b7a 256 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 40 249 3.6E-82 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 Patl_4248 a86cc0dfed30aa146c5941549ec6851c 811 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 12 807 0.0 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 Patl_4248 a86cc0dfed30aa146c5941549ec6851c 811 SUPERFAMILY SSF69593 290 489 4.71E-26 T 11-10-2018 Patl_4248 a86cc0dfed30aa146c5941549ec6851c 811 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 811 26.592 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 Patl_4248 a86cc0dfed30aa146c5941549ec6851c 811 PIRSF PIRSF000437 19 811 3.6E-261 T 11-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 Patl_4248 a86cc0dfed30aa146c5941549ec6851c 811 Pfam PF01553 Acyltransferase 286 427 7.7E-23 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Patl_4248 a86cc0dfed30aa146c5941549ec6851c 811 PIRSF PIRSF500064 3 811 6.0E-272 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 Patl_4248 a86cc0dfed30aa146c5941549ec6851c 811 SMART SM00563 303 430 4.7E-30 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Patl_3835 68305bdcca79724ce34baa1c4de5a716 316 Gene3D G3DSA:3.30.70.270 149 316 1.7E-58 T 11-10-2018 Patl_3835 68305bdcca79724ce34baa1c4de5a716 316 SUPERFAMILY SSF55785 15 89 2.27E-7 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3835 68305bdcca79724ce34baa1c4de5a716 316 SUPERFAMILY SSF55073 160 315 2.12E-49 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3835 68305bdcca79724ce34baa1c4de5a716 316 Pfam PF00990 Diguanylate cyclase, GGDEF domain 156 312 5.1E-49 T 11-10-2018 IPR000160 GGDEF domain Patl_3835 68305bdcca79724ce34baa1c4de5a716 316 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 151 315 1.5E-56 T 11-10-2018 IPR000160 GGDEF domain Patl_3835 68305bdcca79724ce34baa1c4de5a716 316 Gene3D G3DSA:3.30.450.20 5 142 5.0E-30 T 11-10-2018 Patl_3835 68305bdcca79724ce34baa1c4de5a716 316 SMART SM00267 144 316 5.1E-63 T 11-10-2018 IPR000160 GGDEF domain Patl_0230 a4cafc376d110a89a64e395912d4fbf1 284 Gene3D G3DSA:2.30.42.10 176 277 1.1E-23 T 11-10-2018 Patl_0230 a4cafc376d110a89a64e395912d4fbf1 284 Gene3D G3DSA:2.30.30.830 75 142 1.9E-24 T 11-10-2018 Patl_0230 a4cafc376d110a89a64e395912d4fbf1 284 SUPERFAMILY SSF50156 186 277 1.04E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Patl_0230 a4cafc376d110a89a64e395912d4fbf1 284 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 3 268 1.1E-47 T 11-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 Patl_0230 a4cafc376d110a89a64e395912d4fbf1 284 Pfam PF11356 Type II secretion system protein C 3 141 1.9E-38 T 11-10-2018 IPR024961 Type II secretion system protein C, N-terminal Patl_0488 d1531d4a7ef598032f732cf476c50665 823 Gene3D G3DSA:3.40.50.300 181 348 6.1E-51 T 11-10-2018 Patl_0488 d1531d4a7ef598032f732cf476c50665 823 SUPERFAMILY SSF52540 18 340 1.76E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0488 d1531d4a7ef598032f732cf476c50665 823 SMART SM00490 227 329 7.8E-14 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_0488 d1531d4a7ef598032f732cf476c50665 823 SMART SM00487 2 187 3.9E-19 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_0488 d1531d4a7ef598032f732cf476c50665 823 PIRSF PIRSF005496 1 820 2.0E-276 T 11-10-2018 Patl_0488 d1531d4a7ef598032f732cf476c50665 823 Gene3D G3DSA:3.40.50.300 1 180 1.7E-54 T 11-10-2018 Patl_0488 d1531d4a7ef598032f732cf476c50665 823 Pfam PF00271 Helicase conserved C-terminal domain 208 329 7.1E-14 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_0488 d1531d4a7ef598032f732cf476c50665 823 Pfam PF00270 DEAD/DEAH box helicase 15 168 3.2E-12 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Patl_0488 d1531d4a7ef598032f732cf476c50665 823 Pfam PF04408 Helicase associated domain (HA2) 390 452 1.5E-4 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 Patl_0488 d1531d4a7ef598032f732cf476c50665 823 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 5 818 6.2E-283 T 11-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 Patl_0488 d1531d4a7ef598032f732cf476c50665 823 Pfam PF08482 ATP-dependent helicase C-terminal 674 806 2.7E-49 T 11-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal Patl_2825 3114e7eff80375fd4132e1acaacec9d2 250 Gene3D G3DSA:1.10.10.10 86 184 2.2E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2825 3114e7eff80375fd4132e1acaacec9d2 250 SUPERFAMILY SSF46785 88 163 1.59E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2825 3114e7eff80375fd4132e1acaacec9d2 250 SUPERFAMILY SSF46785 4 86 1.31E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2825 3114e7eff80375fd4132e1acaacec9d2 250 Pfam PF04079 Segregation and condensation complex subunit ScpB 12 171 8.5E-52 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Patl_2825 3114e7eff80375fd4132e1acaacec9d2 250 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 9 182 3.5E-31 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Patl_2825 3114e7eff80375fd4132e1acaacec9d2 250 Gene3D G3DSA:1.10.10.10 4 85 2.7E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0262 201c402ee72499f84a21b1ac774d020d 445 SUPERFAMILY SSF161093 273 444 1.57E-48 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Patl_0262 201c402ee72499f84a21b1ac774d020d 445 SMART SM00924 31 134 6.6E-18 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Patl_0262 201c402ee72499f84a21b1ac774d020d 445 SUPERFAMILY SSF54631 134 270 2.02E-12 T 11-10-2018 Patl_0262 201c402ee72499f84a21b1ac774d020d 445 Pfam PF03448 MgtE intracellular N domain 33 132 5.3E-16 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Patl_0262 201c402ee72499f84a21b1ac774d020d 445 Gene3D G3DSA:1.25.60.10 4 125 3.8E-5 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily Patl_0262 201c402ee72499f84a21b1ac774d020d 445 Gene3D G3DSA:1.10.357.20 270 444 1.6E-47 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Patl_0262 201c402ee72499f84a21b1ac774d020d 445 SUPERFAMILY SSF158791 12 128 4.19E-14 T 11-10-2018 Patl_0262 201c402ee72499f84a21b1ac774d020d 445 Gene3D G3DSA:3.10.580.10 130 255 9.0E-30 T 11-10-2018 Patl_0262 201c402ee72499f84a21b1ac774d020d 445 Pfam PF01769 Divalent cation transporter 316 437 2.7E-25 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Patl_0206 b9a1511c8be6cf1419ce498a97de7fe3 580 Gene3D G3DSA:3.50.50.60 3 182 6.5E-7 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0206 b9a1511c8be6cf1419ce498a97de7fe3 580 Pfam PF13454 FAD-NAD(P)-binding 7 176 2.3E-31 T 11-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain Patl_0206 b9a1511c8be6cf1419ce498a97de7fe3 580 SUPERFAMILY SSF51905 2 265 1.51E-10 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_4018 cdc7f88fbf559ee97794579467759dd3 328 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 18 98 5.1E-13 T 11-10-2018 IPR032030 YscD, cytoplasmic domain Patl_4018 cdc7f88fbf559ee97794579467759dd3 328 SMART SM00240 24 76 7.2E-6 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Patl_4018 cdc7f88fbf559ee97794579467759dd3 328 Gene3D G3DSA:2.60.200.20 2 103 5.5E-20 T 11-10-2018 Patl_4018 cdc7f88fbf559ee97794579467759dd3 328 SUPERFAMILY SSF49879 8 98 2.1E-19 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Patl_2844 6814b9f517b6b89bdb81cdc252815d80 769 Gene3D G3DSA:3.40.50.740 141 575 7.9E-74 T 11-10-2018 Patl_2844 6814b9f517b6b89bdb81cdc252815d80 769 Pfam PF00384 Molybdopterin oxidoreductase 128 550 2.7E-28 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Patl_2844 6814b9f517b6b89bdb81cdc252815d80 769 PIRSF PIRSF000144 10 769 0.0 T 11-10-2018 Patl_2844 6814b9f517b6b89bdb81cdc252815d80 769 SUPERFAMILY SSF53706 65 644 4.97E-141 T 11-10-2018 Patl_2844 6814b9f517b6b89bdb81cdc252815d80 769 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 31 768 5.6E-282 T 11-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 Patl_2844 6814b9f517b6b89bdb81cdc252815d80 769 Gene3D G3DSA:2.40.40.20 654 768 1.1E-5 T 11-10-2018 Patl_2844 6814b9f517b6b89bdb81cdc252815d80 769 Gene3D G3DSA:3.40.228.10 204 425 7.9E-74 T 11-10-2018 Patl_2844 6814b9f517b6b89bdb81cdc252815d80 769 Pfam PF01568 Molydopterin dinucleotide binding domain 654 762 4.0E-11 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Patl_2844 6814b9f517b6b89bdb81cdc252815d80 769 SUPERFAMILY SSF50692 650 767 2.49E-15 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Patl_0014 74b196ad11d161726b487a2d77d5bc11 206 Gene3D G3DSA:3.40.50.300 2 204 8.3E-52 T 11-10-2018 Patl_0014 74b196ad11d161726b487a2d77d5bc11 206 SUPERFAMILY SSF52540 21 195 5.95E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0014 74b196ad11d161726b487a2d77d5bc11 206 Pfam PF01926 50S ribosome-binding GTPase 26 143 5.8E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_0014 74b196ad11d161726b487a2d77d5bc11 206 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 191 2.6E-68 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Patl_0014 74b196ad11d161726b487a2d77d5bc11 206 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 195 26.35 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 Patl_0520 f944963a3e484362836baeaedeb5959b 561 SMART SM00304 230 284 1.0E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_0520 f944963a3e484362836baeaedeb5959b 561 Pfam PF17200 Single Cache domain 2 49 193 1.8E-26 T 11-10-2018 IPR033480 Single Cache domain 2 Patl_0520 f944963a3e484362836baeaedeb5959b 561 SUPERFAMILY SSF58104 252 561 1.7E-69 T 11-10-2018 Patl_0520 f944963a3e484362836baeaedeb5959b 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 363 525 8.9E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_0520 f944963a3e484362836baeaedeb5959b 561 SMART SM01049 46 132 1.9E-23 T 11-10-2018 IPR033480 Single Cache domain 2 Patl_0520 f944963a3e484362836baeaedeb5959b 561 Gene3D G3DSA:1.10.287.950 229 561 2.9E-66 T 11-10-2018 Patl_0520 f944963a3e484362836baeaedeb5959b 561 Gene3D G3DSA:3.30.450.20 33 206 1.2E-34 T 11-10-2018 Patl_0520 f944963a3e484362836baeaedeb5959b 561 SMART SM00283 299 560 6.9E-56 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_2581 07da4a6f9811cb87c97ef383fbca8ef4 548 SUPERFAMILY SSF55785 238 367 5.93E-12 T 11-10-2018 IPR035965 PAS domain superfamily Patl_2581 07da4a6f9811cb87c97ef383fbca8ef4 548 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 248 375 2.1E-14 T 11-10-2018 IPR000014 PAS domain Patl_2581 07da4a6f9811cb87c97ef383fbca8ef4 548 Gene3D G3DSA:1.20.1480.50 143 239 1.5E-6 T 11-10-2018 Patl_2581 07da4a6f9811cb87c97ef383fbca8ef4 548 SMART SM00267 369 544 3.7E-46 T 11-10-2018 IPR000160 GGDEF domain Patl_2581 07da4a6f9811cb87c97ef383fbca8ef4 548 Gene3D G3DSA:3.30.450.20 240 374 1.4E-15 T 11-10-2018 Patl_2581 07da4a6f9811cb87c97ef383fbca8ef4 548 SUPERFAMILY SSF55073 385 543 8.44E-43 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_2581 07da4a6f9811cb87c97ef383fbca8ef4 548 Gene3D G3DSA:3.30.70.270 380 548 9.1E-49 T 11-10-2018 Patl_2581 07da4a6f9811cb87c97ef383fbca8ef4 548 SMART SM00091 249 320 3.8E-4 T 11-10-2018 IPR000014 PAS domain Patl_2581 07da4a6f9811cb87c97ef383fbca8ef4 548 Pfam PF00990 Diguanylate cyclase, GGDEF domain 380 539 3.3E-41 T 11-10-2018 IPR000160 GGDEF domain Patl_2581 07da4a6f9811cb87c97ef383fbca8ef4 548 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 379 544 2.5E-43 T 11-10-2018 IPR000160 GGDEF domain Patl_2581 07da4a6f9811cb87c97ef383fbca8ef4 548 Pfam PF08448 PAS fold 255 371 1.6E-8 T 11-10-2018 IPR013656 PAS fold-4 Patl_4278 7f06f27a3a356bfc381cde8fbf2dfadd 254 SUPERFAMILY SSF53335 56 224 2.14E-11 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_4278 7f06f27a3a356bfc381cde8fbf2dfadd 254 Gene3D G3DSA:3.40.50.150 31 228 1.0E-16 T 11-10-2018 Patl_4278 7f06f27a3a356bfc381cde8fbf2dfadd 254 PIRSF PIRSF031679 1 254 4.5E-76 T 11-10-2018 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted Patl_1772 a8911a8a8b59ec94c0378e6ff2b4346b 355 Gene3D G3DSA:3.40.50.720 3 180 1.8E-26 T 11-10-2018 Patl_1772 a8911a8a8b59ec94c0378e6ff2b4346b 355 SUPERFAMILY SSF48179 182 320 2.55E-20 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_1772 a8911a8a8b59ec94c0378e6ff2b4346b 355 Gene3D G3DSA:1.10.1040.10 183 327 3.8E-30 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Patl_1772 a8911a8a8b59ec94c0378e6ff2b4346b 355 Pfam PF02558 Ketopantoate reductase PanE/ApbA 5 158 1.2E-26 T 11-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain Patl_1772 a8911a8a8b59ec94c0378e6ff2b4346b 355 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 5 323 4.9E-54 T 11-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 Patl_1772 a8911a8a8b59ec94c0378e6ff2b4346b 355 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 182 321 4.0E-22 T 11-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain Patl_1772 a8911a8a8b59ec94c0378e6ff2b4346b 355 SUPERFAMILY SSF51735 5 127 4.43E-9 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0540 e5863b1690d9387091a23de809d86945 201 Pfam PF10881 Protein of unknown function (DUF2726) 34 161 1.0E-39 T 11-10-2018 IPR024402 Domain of unknown function DUF2726 Patl_3107 12c2254a74df0c4ac86a66d7b3ed7af3 368 Gene3D G3DSA:3.30.1660.40 8 98 2.6E-28 T 11-10-2018 IPR038180 FlgT, N-terminal domain superfamily Patl_3107 12c2254a74df0c4ac86a66d7b3ed7af3 368 Pfam PF16539 Flagellar assembly protein T, middle domain 99 247 2.5E-44 T 11-10-2018 IPR032386 Flagellar assembly protein T, middle domain Patl_3107 12c2254a74df0c4ac86a66d7b3ed7af3 368 Gene3D G3DSA:3.40.50.10610 99 282 1.9E-42 T 11-10-2018 Patl_3107 12c2254a74df0c4ac86a66d7b3ed7af3 368 Gene3D G3DSA:2.40.10.410 283 368 5.3E-20 T 11-10-2018 IPR038165 FlgT, C-terminal domain superfamily Patl_3107 12c2254a74df0c4ac86a66d7b3ed7af3 368 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 291 367 6.6E-25 T 11-10-2018 IPR032388 Flagellar assembly protein T, C-terminal Patl_3107 12c2254a74df0c4ac86a66d7b3ed7af3 368 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 8 94 2.5E-25 T 11-10-2018 IPR032370 Flagellar assembly protein T, N-terminal Patl_0725 ef56182a770f8e840d2757b7332951b1 619 SUPERFAMILY SSF56349 296 602 1.38E-31 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Patl_0725 ef56182a770f8e840d2757b7332951b1 619 Gene3D G3DSA:1.10.443.10 428 610 1.1E-21 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Patl_0725 ef56182a770f8e840d2757b7332951b1 619 Gene3D G3DSA:1.10.150.130 289 427 1.4E-5 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal Patl_0725 ef56182a770f8e840d2757b7332951b1 619 Pfam PF00589 Phage integrase family 431 602 6.7E-12 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Patl_0725 ef56182a770f8e840d2757b7332951b1 619 Pfam PF11646 Protein of unknown function DUF3258 292 390 5.1E-48 T 11-10-2018 IPR021672 Protein of unknown function DUF3258 Patl_1093 16a229c6303de1dba939514bc81dfe3e 331 Pfam PF01757 Acyltransferase family 13 313 1.2E-23 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Patl_3856 a57285c9461ee0bd05caaaf37644a1f8 92 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.124 T 11-10-2018 IPR023081 Cell division protein FtsB Patl_3856 a57285c9461ee0bd05caaaf37644a1f8 92 Pfam PF04977 Septum formation initiator 11 88 6.1E-24 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC Patl_1691 4a26a37208ce5f39227890a511f1e313 894 Gene3D G3DSA:2.170.130.10 34 176 2.9E-30 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_1691 4a26a37208ce5f39227890a511f1e313 894 SUPERFAMILY SSF56935 39 894 3.66E-91 T 11-10-2018 Patl_1691 4a26a37208ce5f39227890a511f1e313 894 Pfam PF00593 TonB dependent receptor 375 890 3.3E-39 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1691 4a26a37208ce5f39227890a511f1e313 894 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 173 5.4E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1023 4c522d25246be30c286d65485c87352f 260 Gene3D G3DSA:2.40.100.10 22 183 6.8E-39 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Patl_1023 4c522d25246be30c286d65485c87352f 260 SUPERFAMILY SSF50891 25 167 2.92E-32 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Patl_1023 4c522d25246be30c286d65485c87352f 260 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 66 78 1.6E-6 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_1023 4c522d25246be30c286d65485c87352f 260 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 108 123 1.6E-6 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_1023 4c522d25246be30c286d65485c87352f 260 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 40 55 1.6E-6 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_1023 4c522d25246be30c286d65485c87352f 260 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 27 165 8.7E-31 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_2094 da80bb01137d76bc5db85a626d5e656c 140 PIRSF PIRSF006276 1 140 2.9E-32 T 11-10-2018 IPR006015 Universal stress protein A Patl_2094 da80bb01137d76bc5db85a626d5e656c 140 Pfam PF00582 Universal stress protein family 3 139 1.5E-26 T 11-10-2018 IPR006016 UspA Patl_2094 da80bb01137d76bc5db85a626d5e656c 140 PRINTS PR01438 Universal stress protein signature 4 22 1.4E-14 T 11-10-2018 IPR006015 Universal stress protein A Patl_2094 da80bb01137d76bc5db85a626d5e656c 140 PRINTS PR01438 Universal stress protein signature 117 139 1.4E-14 T 11-10-2018 IPR006015 Universal stress protein A Patl_2094 da80bb01137d76bc5db85a626d5e656c 140 PRINTS PR01438 Universal stress protein signature 100 112 1.4E-14 T 11-10-2018 IPR006015 Universal stress protein A Patl_2094 da80bb01137d76bc5db85a626d5e656c 140 Gene3D G3DSA:3.40.50.620 1 140 4.9E-33 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_2094 da80bb01137d76bc5db85a626d5e656c 140 SUPERFAMILY SSF52402 4 139 1.0E-28 T 11-10-2018 Patl_1866 1db44cbe3583d6169be4f82a26476724 246 Pfam PF00005 ABC transporter 20 155 1.5E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1866 1db44cbe3583d6169be4f82a26476724 246 SUPERFAMILY SSF52540 8 228 2.96E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1866 1db44cbe3583d6169be4f82a26476724 246 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_1866 1db44cbe3583d6169be4f82a26476724 246 Gene3D G3DSA:3.40.50.300 2 231 3.5E-62 T 11-10-2018 Patl_1866 1db44cbe3583d6169be4f82a26476724 246 SMART SM00382 29 204 6.3E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_4095 93cb52aab064340418687d25fab06298 138 Pfam PF01124 MAPEG family 11 133 8.4E-20 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein Patl_4095 93cb52aab064340418687d25fab06298 138 Gene3D G3DSA:1.20.120.550 4 135 4.0E-22 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily Patl_4095 93cb52aab064340418687d25fab06298 138 SUPERFAMILY SSF161084 5 132 1.57E-25 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily Patl_0245 5d48e09292cffae583192cece2822ef5 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 1.7E-139 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Patl_0245 5d48e09292cffae583192cece2822ef5 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Patl_0245 5d48e09292cffae583192cece2822ef5 355 Gene3D G3DSA:3.20.20.210 1 354 2.7E-163 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Patl_0245 5d48e09292cffae583192cece2822ef5 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 7.9E-145 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Patl_0245 5d48e09292cffae583192cece2822ef5 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 51.067 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Patl_0245 5d48e09292cffae583192cece2822ef5 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Patl_0245 5d48e09292cffae583192cece2822ef5 355 SUPERFAMILY SSF51726 2 353 3.14E-125 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Patl_2147 7c55e3e8e29bd4966af0142bd7311d5b 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 3.1E-6 T 11-10-2018 Patl_2147 7c55e3e8e29bd4966af0142bd7311d5b 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 179 194 3.1E-6 T 11-10-2018 Patl_2147 7c55e3e8e29bd4966af0142bd7311d5b 549 Gene3D G3DSA:3.30.70.20 450 544 1.6E-39 T 11-10-2018 Patl_2147 7c55e3e8e29bd4966af0142bd7311d5b 549 Gene3D G3DSA:3.30.9.90 79 449 2.0E-192 T 11-10-2018 Patl_2147 7c55e3e8e29bd4966af0142bd7311d5b 549 SUPERFAMILY SSF54862 449 549 5.66E-30 T 11-10-2018 Patl_2147 7c55e3e8e29bd4966af0142bd7311d5b 549 Gene3D G3DSA:3.50.50.60 7 385 2.0E-192 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2147 7c55e3e8e29bd4966af0142bd7311d5b 549 Pfam PF01494 FAD binding domain 8 205 2.6E-7 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 Patl_2147 7c55e3e8e29bd4966af0142bd7311d5b 549 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 446 546 3.1E-51 T 11-10-2018 Patl_2147 7c55e3e8e29bd4966af0142bd7311d5b 549 SUPERFAMILY SSF54373 211 305 3.84E-34 T 11-10-2018 Patl_2147 7c55e3e8e29bd4966af0142bd7311d5b 549 SUPERFAMILY SSF51905 4 447 3.93E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0779 a3a82e58d0f5fbc1e9069b14463dbd74 500 Gene3D G3DSA:1.10.1040.10 292 498 1.1E-56 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Patl_0779 a3a82e58d0f5fbc1e9069b14463dbd74 500 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 228 240 - T 11-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Patl_0779 a3a82e58d0f5fbc1e9069b14463dbd74 500 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 34 198 1.6E-38 T 11-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_0779 a3a82e58d0f5fbc1e9069b14463dbd74 500 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 226 467 2.2E-72 T 11-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 Patl_0779 a3a82e58d0f5fbc1e9069b14463dbd74 500 SUPERFAMILY SSF48179 293 488 2.96E-49 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_0779 a3a82e58d0f5fbc1e9069b14463dbd74 500 Gene3D G3DSA:3.40.50.720 7 291 2.6E-112 T 11-10-2018 Patl_0779 a3a82e58d0f5fbc1e9069b14463dbd74 500 SUPERFAMILY SSF51735 10 291 1.46E-102 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0779 a3a82e58d0f5fbc1e9069b14463dbd74 500 PRINTS PR00084 Mannitol dehydrogenase signature 228 241 4.9E-20 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Patl_0779 a3a82e58d0f5fbc1e9069b14463dbd74 500 PRINTS PR00084 Mannitol dehydrogenase signature 35 45 4.9E-20 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Patl_0779 a3a82e58d0f5fbc1e9069b14463dbd74 500 PRINTS PR00084 Mannitol dehydrogenase signature 189 202 4.9E-20 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Patl_0779 a3a82e58d0f5fbc1e9069b14463dbd74 500 PRINTS PR00084 Mannitol dehydrogenase signature 258 273 4.9E-20 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Patl_0468 a7ec3082d23dbe8e43af4cfac54aabd6 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 1.1E-35 T 11-10-2018 IPR027486 Ribosomal protein S10 domain Patl_0468 a7ec3082d23dbe8e43af4cfac54aabd6 103 SMART SM01403 7 101 8.9E-57 T 11-10-2018 IPR027486 Ribosomal protein S10 domain Patl_0468 a7ec3082d23dbe8e43af4cfac54aabd6 103 SUPERFAMILY SSF54999 5 101 8.89E-37 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Patl_0468 a7ec3082d23dbe8e43af4cfac54aabd6 103 Gene3D G3DSA:3.30.70.600 1 103 1.1E-37 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Patl_0468 a7ec3082d23dbe8e43af4cfac54aabd6 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0468 a7ec3082d23dbe8e43af4cfac54aabd6 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 4.8E-19 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0468 a7ec3082d23dbe8e43af4cfac54aabd6 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 4.8E-19 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0468 a7ec3082d23dbe8e43af4cfac54aabd6 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 4.8E-19 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0468 a7ec3082d23dbe8e43af4cfac54aabd6 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.294 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0468 a7ec3082d23dbe8e43af4cfac54aabd6 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-46 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0871 02d38b44de7ef1883c5d2a8e92aa479b 247 SUPERFAMILY SSF63380 4 107 2.69E-13 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Patl_0871 02d38b44de7ef1883c5d2a8e92aa479b 247 Pfam PF08021 Siderophore-interacting FAD-binding domain 54 103 1.2E-15 T 11-10-2018 IPR013113 FAD-binding 9, siderophore-interacting Patl_0871 02d38b44de7ef1883c5d2a8e92aa479b 247 Pfam PF08021 Siderophore-interacting FAD-binding domain 12 52 4.0E-7 T 11-10-2018 IPR013113 FAD-binding 9, siderophore-interacting Patl_0871 02d38b44de7ef1883c5d2a8e92aa479b 247 Gene3D G3DSA:2.40.30.10 1 105 4.9E-37 T 11-10-2018 Patl_0871 02d38b44de7ef1883c5d2a8e92aa479b 247 Gene3D G3DSA:3.40.50.80 106 247 1.1E-45 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_0871 02d38b44de7ef1883c5d2a8e92aa479b 247 Pfam PF04954 Siderophore-interacting protein 112 231 6.0E-31 T 11-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain Patl_0653 7e3405ef2edf0070b8d5ef54847d65d4 214 PRINTS PR00097 Anthranilate synthase component II signature 119 131 8.5E-25 T 11-10-2018 Patl_0653 7e3405ef2edf0070b8d5ef54847d65d4 214 PRINTS PR00097 Anthranilate synthase component II signature 2 16 8.5E-25 T 11-10-2018 Patl_0653 7e3405ef2edf0070b8d5ef54847d65d4 214 PRINTS PR00097 Anthranilate synthase component II signature 74 85 8.5E-25 T 11-10-2018 Patl_0653 7e3405ef2edf0070b8d5ef54847d65d4 214 PRINTS PR00097 Anthranilate synthase component II signature 99 107 8.5E-25 T 11-10-2018 Patl_0653 7e3405ef2edf0070b8d5ef54847d65d4 214 PRINTS PR00097 Anthranilate synthase component II signature 47 56 8.5E-25 T 11-10-2018 Patl_0653 7e3405ef2edf0070b8d5ef54847d65d4 214 Gene3D G3DSA:3.40.50.880 2 208 3.4E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_0653 7e3405ef2edf0070b8d5ef54847d65d4 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.9E-13 T 11-10-2018 Patl_0653 7e3405ef2edf0070b8d5ef54847d65d4 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.9E-13 T 11-10-2018 Patl_0653 7e3405ef2edf0070b8d5ef54847d65d4 214 PRINTS PR00096 Glutamine amidotransferase superfamily signature 183 196 4.9E-13 T 11-10-2018 Patl_0653 7e3405ef2edf0070b8d5ef54847d65d4 214 Pfam PF00117 Glutamine amidotransferase class-I 4 205 2.3E-47 T 11-10-2018 IPR017926 Glutamine amidotransferase Patl_0653 7e3405ef2edf0070b8d5ef54847d65d4 214 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.0E-5 T 11-10-2018 Patl_0653 7e3405ef2edf0070b8d5ef54847d65d4 214 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.0E-5 T 11-10-2018 Patl_0653 7e3405ef2edf0070b8d5ef54847d65d4 214 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 2 205 2.6E-68 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Patl_0653 7e3405ef2edf0070b8d5ef54847d65d4 214 SUPERFAMILY SSF52317 2 206 6.42E-49 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_3139 f7691eb8959e34b800797146b989df5c 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.0E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Patl_3139 f7691eb8959e34b800797146b989df5c 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.0E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Patl_3139 f7691eb8959e34b800797146b989df5c 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.0E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Patl_3139 f7691eb8959e34b800797146b989df5c 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.0E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Patl_3139 f7691eb8959e34b800797146b989df5c 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.0E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Patl_3139 f7691eb8959e34b800797146b989df5c 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.0E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Patl_3139 f7691eb8959e34b800797146b989df5c 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.0E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Patl_3139 f7691eb8959e34b800797146b989df5c 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 36.742 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Patl_3139 f7691eb8959e34b800797146b989df5c 285 SUPERFAMILY SSF53223 3 122 3.07E-39 T 11-10-2018 Patl_3139 f7691eb8959e34b800797146b989df5c 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 280 1.4E-65 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Patl_3139 f7691eb8959e34b800797146b989df5c 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Patl_3139 f7691eb8959e34b800797146b989df5c 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 6.8E-39 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Patl_3139 f7691eb8959e34b800797146b989df5c 285 Gene3D G3DSA:3.40.50.720 6 259 4.9E-106 T 11-10-2018 Patl_3139 f7691eb8959e34b800797146b989df5c 285 SUPERFAMILY SSF51735 123 281 7.79E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3139 f7691eb8959e34b800797146b989df5c 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Patl_3139 f7691eb8959e34b800797146b989df5c 285 Gene3D G3DSA:3.40.50.10860 8 276 4.9E-106 T 11-10-2018 Patl_3683 5f2a621f96e9f2aad340b68395c13a7a 486 Gene3D G3DSA:1.20.1730.10 30 475 5.9E-95 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Patl_3683 5f2a621f96e9f2aad340b68395c13a7a 486 Pfam PF00474 Sodium:solute symporter family 40 425 4.3E-38 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_3683 5f2a621f96e9f2aad340b68395c13a7a 486 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 40 425 1.0E-64 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_0535 d9d519facabf3b11fb95abe85586caa5 279 SUPERFAMILY SSF53850 70 206 2.85E-6 T 11-10-2018 Patl_0535 d9d519facabf3b11fb95abe85586caa5 279 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 70 195 1.6E-6 T 11-10-2018 Patl_0535 d9d519facabf3b11fb95abe85586caa5 279 Gene3D G3DSA:3.40.190.10 119 198 1.2E-7 T 11-10-2018 Patl_0535 d9d519facabf3b11fb95abe85586caa5 279 Gene3D G3DSA:3.40.190.10 70 118 1.2E-7 T 11-10-2018 Patl_1385 064878976ff22853e63d644cea7ffaf3 327 SUPERFAMILY SSF143422 16 193 2.88E-19 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Patl_1385 064878976ff22853e63d644cea7ffaf3 327 SMART SM01321 12 187 0.0069 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Patl_0866 a677d8ad251af059457ea1c89dee4385 299 SUPERFAMILY SSF46785 3 83 2.99E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0866 a677d8ad251af059457ea1c89dee4385 299 SUPERFAMILY SSF53850 90 295 4.89E-36 T 11-10-2018 Patl_0866 a677d8ad251af059457ea1c89dee4385 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 9.2E-12 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0866 a677d8ad251af059457ea1c89dee4385 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 8.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0866 a677d8ad251af059457ea1c89dee4385 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 8.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0866 a677d8ad251af059457ea1c89dee4385 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 8.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_0866 a677d8ad251af059457ea1c89dee4385 299 Gene3D G3DSA:3.40.190.10 168 267 2.2E-50 T 11-10-2018 Patl_0866 a677d8ad251af059457ea1c89dee4385 299 Pfam PF03466 LysR substrate binding domain 99 295 5.9E-16 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_0866 a677d8ad251af059457ea1c89dee4385 299 Gene3D G3DSA:3.40.190.10 90 292 2.2E-50 T 11-10-2018 Patl_0866 a677d8ad251af059457ea1c89dee4385 299 Gene3D G3DSA:1.10.10.10 1 86 9.2E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3230 1af8b5de13a8b88092f40908adc49a83 139 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 7 135 3.9E-42 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 Patl_3230 1af8b5de13a8b88092f40908adc49a83 139 Pfam PF08334 Type II secretion system (T2SS), protein G 32 134 1.8E-32 T 11-10-2018 IPR013545 Type II secretion system protein G Patl_3230 1af8b5de13a8b88092f40908adc49a83 139 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 1.4E-13 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Patl_3230 1af8b5de13a8b88092f40908adc49a83 139 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 1.4E-13 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Patl_3230 1af8b5de13a8b88092f40908adc49a83 139 SUPERFAMILY SSF54523 35 135 4.87E-27 T 11-10-2018 Patl_3230 1af8b5de13a8b88092f40908adc49a83 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 28 1.2E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3230 1af8b5de13a8b88092f40908adc49a83 139 Gene3D G3DSA:3.30.700.10 32 135 6.8E-28 T 11-10-2018 Patl_3230 1af8b5de13a8b88092f40908adc49a83 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 1.2E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_1572 9f75392d0e3adc573789bd838c16120e 274 SUPERFAMILY SSF51717 4 272 1.7E-105 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Patl_1572 9f75392d0e3adc573789bd838c16120e 274 Gene3D G3DSA:3.20.20.20 1 274 6.3E-112 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Patl_1572 9f75392d0e3adc573789bd838c16120e 274 Pfam PF00809 Pterin binding enzyme 16 255 2.2E-85 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Patl_1572 9f75392d0e3adc573789bd838c16120e 274 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 15 30 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Patl_1572 9f75392d0e3adc573789bd838c16120e 274 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 14 269 7.8E-104 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Patl_0375 848f8baa3e8ba0ab8b93408a6cbb2775 393 SUPERFAMILY SSF160996 190 337 6.8E-40 T 11-10-2018 Patl_0375 848f8baa3e8ba0ab8b93408a6cbb2775 393 Gene3D G3DSA:2.40.30.10 188 338 1.1E-125 T 11-10-2018 Patl_0375 848f8baa3e8ba0ab8b93408a6cbb2775 393 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 391 1.5E-129 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like Patl_0375 848f8baa3e8ba0ab8b93408a6cbb2775 393 SUPERFAMILY SSF51905 3 393 1.89E-60 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0375 848f8baa3e8ba0ab8b93408a6cbb2775 393 Gene3D G3DSA:1.10.8.260 261 321 1.1E-125 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily Patl_0375 848f8baa3e8ba0ab8b93408a6cbb2775 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 5.6E-6 T 11-10-2018 Patl_0375 848f8baa3e8ba0ab8b93408a6cbb2775 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.6E-6 T 11-10-2018 Patl_0375 848f8baa3e8ba0ab8b93408a6cbb2775 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 5.6E-6 T 11-10-2018 Patl_0375 848f8baa3e8ba0ab8b93408a6cbb2775 393 Gene3D G3DSA:3.50.50.60 7 387 1.1E-125 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0375 848f8baa3e8ba0ab8b93408a6cbb2775 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.6E-8 T 11-10-2018 Patl_0375 848f8baa3e8ba0ab8b93408a6cbb2775 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 361 368 1.6E-8 T 11-10-2018 Patl_0375 848f8baa3e8ba0ab8b93408a6cbb2775 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 1.6E-8 T 11-10-2018 Patl_0375 848f8baa3e8ba0ab8b93408a6cbb2775 393 Pfam PF03486 HI0933-like protein 5 391 2.0E-149 T 11-10-2018 Patl_1922 c431ee4860a60d3d51bb9008324b5029 390 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 59 301 5.2E-17 T 11-10-2018 IPR008775 Phytanoyl-CoA dioxygenase Patl_1922 c431ee4860a60d3d51bb9008324b5029 390 SUPERFAMILY SSF51197 43 364 2.88E-43 T 11-10-2018 Patl_0723 1080885169e2d9a87324d9d275b66627 866 Pfam PF00912 Transglycosylase 27 201 5.2E-60 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_0723 1080885169e2d9a87324d9d275b66627 866 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 37 758 8.6E-163 T 11-10-2018 Patl_0723 1080885169e2d9a87324d9d275b66627 866 SUPERFAMILY SSF56601 183 845 8.55E-108 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Patl_0723 1080885169e2d9a87324d9d275b66627 866 Gene3D G3DSA:1.10.3810.10 20 218 2.0E-73 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_0723 1080885169e2d9a87324d9d275b66627 866 Pfam PF17092 Penicillin-binding protein OB-like domain 289 419 7.4E-32 T 11-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_0723 1080885169e2d9a87324d9d275b66627 866 Gene3D G3DSA:3.40.710.10 220 298 1.8E-6 T 11-10-2018 Patl_0723 1080885169e2d9a87324d9d275b66627 866 SUPERFAMILY SSF53955 15 227 7.59E-74 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Patl_0723 1080885169e2d9a87324d9d275b66627 866 Pfam PF00905 Penicillin binding protein transpeptidase domain 422 601 7.1E-22 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Patl_3886 0703ce2b0b2de236218d2732e703872a 128 TIGRFAM TIGR02792 PCA_ligA: protocatechuate 4,5-dioxygenase, alpha subunit 7 122 3.6E-59 T 11-10-2018 IPR014159 Protocatechuate 4,5-dioxygenase, alpha subunit KEGG: 00362+1.13.11.8|KEGG: 00624+1.13.11.8|KEGG: 00627+1.13.11.8|MetaCyc: PWY-6216|MetaCyc: PWY-6217 Patl_3886 0703ce2b0b2de236218d2732e703872a 128 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 27 112 1.0E-35 T 11-10-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit Patl_3886 0703ce2b0b2de236218d2732e703872a 128 Gene3D G3DSA:1.10.700.10 2 127 3.1E-54 T 11-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily Patl_3886 0703ce2b0b2de236218d2732e703872a 128 SUPERFAMILY SSF48076 4 123 3.79E-48 T 11-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily Patl_0260 a3b74dae4ec868d54bfb4d82c8551cbf 579 Pfam PF01103 Surface antigen 285 576 3.6E-26 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Patl_0260 a3b74dae4ec868d54bfb4d82c8551cbf 579 Gene3D G3DSA:2.40.160.50 271 579 1.6E-92 T 11-10-2018 Patl_0260 a3b74dae4ec868d54bfb4d82c8551cbf 579 Gene3D G3DSA:3.10.20.310 107 194 2.0E-19 T 11-10-2018 Patl_0260 a3b74dae4ec868d54bfb4d82c8551cbf 579 Gene3D G3DSA:3.10.20.310 195 270 3.7E-13 T 11-10-2018 Patl_0260 a3b74dae4ec868d54bfb4d82c8551cbf 579 Pfam PF17243 POTRA domain TamA domain 1 29 104 5.8E-13 T 11-10-2018 IPR035243 TamA, POTRA domain 1 Patl_3492 b2926d941f181d91c5ac260036d84949 236 Pfam PF13709 Domain of unknown function (DUF4159) 38 234 6.7E-52 T 11-10-2018 IPR025297 Domain of unknown function DUF4159 Patl_3492 b2926d941f181d91c5ac260036d84949 236 Gene3D G3DSA:3.40.50.12140 32 236 2.7E-42 T 11-10-2018 Patl_0929 4d6da088ae598f9f5dc3d44dbd1939d6 284 Gene3D G3DSA:1.10.472.150 48 167 7.0E-34 T 11-10-2018 Patl_0929 4d6da088ae598f9f5dc3d44dbd1939d6 284 SUPERFAMILY SSF55486 64 271 3.52E-54 T 11-10-2018 Patl_0929 4d6da088ae598f9f5dc3d44dbd1939d6 284 Gene3D G3DSA:3.40.390.10 171 284 1.1E-37 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Patl_0929 4d6da088ae598f9f5dc3d44dbd1939d6 284 Pfam PF06167 Glucose-regulated metallo-peptidase M90 32 271 2.7E-85 T 11-10-2018 IPR010384 MtfA family Patl_3609 41f8b5fa3c5f034f8b11a58852319137 255 Gene3D G3DSA:3.20.20.370 17 252 2.1E-73 T 11-10-2018 Patl_3609 41f8b5fa3c5f034f8b11a58852319137 255 Pfam PF04748 Divergent polysaccharide deacetylase 30 240 3.0E-70 T 11-10-2018 IPR006837 Divergent polysaccharide deacetylase Patl_3609 41f8b5fa3c5f034f8b11a58852319137 255 SUPERFAMILY SSF88713 27 241 3.11E-65 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Patl_2669 164a983af495aeeca6bc03041919006d 129 TIGRFAM TIGR03166 alt_F1F0_F1_eps: alternate F1F0 ATPase, F1 subunit epsilon 3 122 2.9E-41 T 11-10-2018 IPR024037 Alternate ATP synthase, F1 complex, subunit epsilon Patl_2669 164a983af495aeeca6bc03041919006d 129 SUPERFAMILY SSF51344 1 83 6.15E-14 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2669 164a983af495aeeca6bc03041919006d 129 Gene3D G3DSA:2.60.15.10 1 123 7.9E-16 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2669 164a983af495aeeca6bc03041919006d 129 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 1 81 9.8E-16 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_1798 a52c90b2ab85c77f920befd836b40052 236 SUPERFAMILY SSF54292 1 104 2.01E-29 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Patl_1798 a52c90b2ab85c77f920befd836b40052 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 2.5E-31 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1798 a52c90b2ab85c77f920befd836b40052 236 Gene3D G3DSA:3.10.20.30 1 104 1.4E-35 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_1798 a52c90b2ab85c77f920befd836b40052 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 7.1E-10 T 11-10-2018 Patl_1798 a52c90b2ab85c77f920befd836b40052 236 SUPERFAMILY SSF46548 105 233 3.14E-41 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Patl_1798 a52c90b2ab85c77f920befd836b40052 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 228 1.5E-88 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1798 a52c90b2ab85c77f920befd836b40052 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Patl_1798 a52c90b2ab85c77f920befd836b40052 236 Gene3D G3DSA:1.10.1060.10 105 236 2.1E-58 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Patl_3099 9b13314d797f6e008fb1f812186be5f8 140 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Patl_3099 9b13314d797f6e008fb1f812186be5f8 140 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 1.2E-48 T 11-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 Patl_3099 9b13314d797f6e008fb1f812186be5f8 140 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 91 136 8.9E-11 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Patl_3099 9b13314d797f6e008fb1f812186be5f8 140 Pfam PF00460 Flagella basal body rod protein 7 32 1.5E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Patl_0543 35579167314077d6fea3a39b3ada2a5e 366 ProSitePatterns PS00018 EF-hand calcium-binding domain. 332 344 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Patl_0543 35579167314077d6fea3a39b3ada2a5e 366 ProSitePatterns PS00018 EF-hand calcium-binding domain. 78 90 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Patl_0543 35579167314077d6fea3a39b3ada2a5e 366 SUPERFAMILY SSF47473 49 352 1.84E-16 T 11-10-2018 IPR011992 EF-hand domain pair Patl_0543 35579167314077d6fea3a39b3ada2a5e 366 Gene3D G3DSA:1.10.238.10 34 101 4.3E-6 T 11-10-2018 Patl_0543 35579167314077d6fea3a39b3ada2a5e 366 Gene3D G3DSA:1.10.238.10 294 356 3.6E-9 T 11-10-2018 Patl_0543 35579167314077d6fea3a39b3ada2a5e 366 Pfam PF13202 EF hand 303 319 6.8E-4 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 Patl_3266 6666ca0021ad92a09308a730cee014b5 430 Pfam PF03952 Enolase, N-terminal domain 4 134 1.2E-59 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3266 6666ca0021ad92a09308a730cee014b5 430 Gene3D G3DSA:3.20.20.120 128 430 4.1E-137 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Patl_3266 6666ca0021ad92a09308a730cee014b5 430 ProSitePatterns PS00164 Enolase signature. 338 351 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3266 6666ca0021ad92a09308a730cee014b5 430 Gene3D G3DSA:3.30.390.10 1 126 1.2E-56 T 11-10-2018 IPR029017 Enolase-like, N-terminal Patl_3266 6666ca0021ad92a09308a730cee014b5 430 SMART SM01193 4 134 1.5E-93 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3266 6666ca0021ad92a09308a730cee014b5 430 PRINTS PR00148 Enolase signature 37 51 5.3E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3266 6666ca0021ad92a09308a730cee014b5 430 PRINTS PR00148 Enolase signature 165 178 5.3E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3266 6666ca0021ad92a09308a730cee014b5 430 PRINTS PR00148 Enolase signature 367 384 5.3E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3266 6666ca0021ad92a09308a730cee014b5 430 PRINTS PR00148 Enolase signature 315 326 5.3E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3266 6666ca0021ad92a09308a730cee014b5 430 PRINTS PR00148 Enolase signature 338 352 5.3E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3266 6666ca0021ad92a09308a730cee014b5 430 PRINTS PR00148 Enolase signature 107 123 5.3E-45 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3266 6666ca0021ad92a09308a730cee014b5 430 PIRSF PIRSF001400 1 429 1.9E-194 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3266 6666ca0021ad92a09308a730cee014b5 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 1.2E-208 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3266 6666ca0021ad92a09308a730cee014b5 430 SMART SM01192 143 429 8.0E-222 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3266 6666ca0021ad92a09308a730cee014b5 430 SUPERFAMILY SSF54826 4 138 1.81E-56 T 11-10-2018 Patl_3266 6666ca0021ad92a09308a730cee014b5 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 428 2.9E-139 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3266 6666ca0021ad92a09308a730cee014b5 430 Hamap MF_00318 Enolase [eno]. 2 415 45.002 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Patl_3266 6666ca0021ad92a09308a730cee014b5 430 SUPERFAMILY SSF51604 143 427 1.44E-130 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Patl_3303 07e3335f34ede23c4e5c1e8d0ebc9939 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.2E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3303 07e3335f34ede23c4e5c1e8d0ebc9939 298 SUPERFAMILY SSF53850 89 291 2.64E-43 T 11-10-2018 Patl_3303 07e3335f34ede23c4e5c1e8d0ebc9939 298 Pfam PF03466 LysR substrate binding domain 89 289 4.7E-41 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_3303 07e3335f34ede23c4e5c1e8d0ebc9939 298 Gene3D G3DSA:3.40.190.290 91 289 1.9E-58 T 11-10-2018 Patl_3303 07e3335f34ede23c4e5c1e8d0ebc9939 298 Gene3D G3DSA:1.10.10.10 2 86 6.8E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3303 07e3335f34ede23c4e5c1e8d0ebc9939 298 SUPERFAMILY SSF46785 5 88 4.08E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0696 ad59a813702a3f51e9b099d2b266945c 293 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 10 287 1.4E-44 T 11-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 Patl_0346 0f9b69d1b48c09b49a4b2b3e5910fb73 108 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 25.367 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Patl_0346 0f9b69d1b48c09b49a4b2b3e5910fb73 108 SUPERFAMILY SSF55387 1 101 3.14E-34 T 11-10-2018 Patl_0346 0f9b69d1b48c09b49a4b2b3e5910fb73 108 SMART SM01219 1 104 8.1E-49 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Patl_0346 0f9b69d1b48c09b49a4b2b3e5910fb73 108 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 11-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Patl_0346 0f9b69d1b48c09b49a4b2b3e5910fb73 108 Pfam PF01491 Frataxin-like domain 1 99 5.6E-25 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Patl_0346 0f9b69d1b48c09b49a4b2b3e5910fb73 108 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 2.9E-38 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Patl_0346 0f9b69d1b48c09b49a4b2b3e5910fb73 108 Gene3D G3DSA:3.30.920.10 1 104 2.2E-34 T 11-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 Patl_1189 098129344103aa52cf846e265eea237a 626 Gene3D G3DSA:3.40.50.300 24 285 5.9E-23 T 11-10-2018 Patl_1189 098129344103aa52cf846e265eea237a 626 SUPERFAMILY SSF52540 60 284 1.21E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1189 098129344103aa52cf846e265eea237a 626 Pfam PF13469 Sulfotransferase family 64 275 3.7E-17 T 11-10-2018 Patl_1256 347e1763cb21315d25dd3810a9426b24 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 450 9.2E-135 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 Patl_1256 347e1763cb21315d25dd3810a9426b24 450 Pfam PF13180 PDZ domain 225 282 9.5E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Patl_1256 347e1763cb21315d25dd3810a9426b24 450 Gene3D G3DSA:2.30.42.10 126 220 7.6E-24 T 11-10-2018 Patl_1256 347e1763cb21315d25dd3810a9426b24 450 SUPERFAMILY SSF50156 88 187 3.42E-10 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Patl_1256 347e1763cb21315d25dd3810a9426b24 450 Gene3D G3DSA:2.30.42.10 221 309 2.1E-16 T 11-10-2018 Patl_1256 347e1763cb21315d25dd3810a9426b24 450 Pfam PF02163 Peptidase family M50 11 437 1.7E-85 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Patl_1256 347e1763cb21315d25dd3810a9426b24 450 SMART SM00228 115 186 0.72 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Patl_1256 347e1763cb21315d25dd3810a9426b24 450 SMART SM00228 211 280 2.5E-4 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Patl_1256 347e1763cb21315d25dd3810a9426b24 450 SUPERFAMILY SSF50156 194 285 1.2E-13 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Patl_0597 3c1d00ba890fe20a20b117447f0207de 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 24.92 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0597 3c1d00ba890fe20a20b117447f0207de 123 SUPERFAMILY SSF48300 4 59 2.62E-15 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0597 3c1d00ba890fe20a20b117447f0207de 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 83 1.0E-7 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0597 3c1d00ba890fe20a20b117447f0207de 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 5.9E-14 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0597 3c1d00ba890fe20a20b117447f0207de 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 2.4E-31 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0597 3c1d00ba890fe20a20b117447f0207de 123 SUPERFAMILY SSF54736 53 123 1.55E-25 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Patl_0597 3c1d00ba890fe20a20b117447f0207de 123 Gene3D G3DSA:3.30.1390.10 53 123 9.5E-32 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Patl_0597 3c1d00ba890fe20a20b117447f0207de 123 Gene3D G3DSA:1.20.5.710 2 52 1.0E-19 T 11-10-2018 Patl_0597 3c1d00ba890fe20a20b117447f0207de 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 1.0E-46 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0605 f0df75ce2b661f3c0fb80b94418dc624 209 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 6 198 2.9E-62 T 11-10-2018 IPR015796 Impact family, bacterial/archaeal Patl_0605 f0df75ce2b661f3c0fb80b94418dc624 209 SUPERFAMILY SSF54211 6 134 1.25E-39 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_0605 f0df75ce2b661f3c0fb80b94418dc624 209 Gene3D G3DSA:3.30.230.30 1 137 4.9E-49 T 11-10-2018 IPR036956 Impact, N-terminal domain superfamily Patl_0605 f0df75ce2b661f3c0fb80b94418dc624 209 Pfam PF01205 Uncharacterized protein family UPF0029 21 128 4.5E-25 T 11-10-2018 IPR001498 Impact, N-terminal Patl_1075 c050de66ccc8aa482310d626ab1c1adb 247 SUPERFAMILY SSF48452 65 177 5.52E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1075 c050de66ccc8aa482310d626ab1c1adb 247 Gene3D G3DSA:1.25.40.10 41 207 3.3E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3112 ca64c83f9b31cbd0c3236d7e36a3dd8d 194 Gene3D G3DSA:3.30.1370.110 47 184 3.0E-38 T 11-10-2018 Patl_3112 ca64c83f9b31cbd0c3236d7e36a3dd8d 194 SUPERFAMILY SSF160443 95 177 3.14E-10 T 11-10-2018 IPR036063 Smr domain superfamily Patl_3112 ca64c83f9b31cbd0c3236d7e36a3dd8d 194 Pfam PF01713 Smr domain 97 178 2.2E-15 T 11-10-2018 IPR002625 Smr domain Patl_3500 dd3e3230af9f0cdd60ed2b821aff0888 155 PIRSF PIRSF006181 1 155 1.8E-52 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Patl_3500 dd3e3230af9f0cdd60ed2b821aff0888 155 SUPERFAMILY SSF55826 2 154 4.97E-40 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Patl_3500 dd3e3230af9f0cdd60ed2b821aff0888 155 Gene3D G3DSA:3.90.960.10 1 155 4.4E-53 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Patl_3500 dd3e3230af9f0cdd60ed2b821aff0888 155 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 154 2.5E-54 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC Patl_3500 dd3e3230af9f0cdd60ed2b821aff0888 155 Pfam PF04073 Aminoacyl-tRNA editing domain 32 144 1.8E-27 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 SMART SM00387 416 529 6.3E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 SUPERFAMILY SSF52172 546 656 6.83E-30 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 SUPERFAMILY SSF47384 293 369 7.46E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 SMART SM00388 304 370 5.6E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 SUPERFAMILY SSF55874 359 529 6.42E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 Pfam PF00072 Response regulator receiver domain 548 655 1.7E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 Pfam PF00512 His Kinase A (phospho-acceptor) domain 305 369 4.2E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 175 298 1.1E-5 T 11-10-2018 IPR000014 PAS domain Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 SUPERFAMILY SSF55785 50 155 2.51E-6 T 11-10-2018 IPR035965 PAS domain superfamily Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 Gene3D G3DSA:3.30.565.10 371 537 2.5E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 Gene3D G3DSA:3.40.50.2300 541 660 4.1E-29 T 11-10-2018 Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 Pfam PF08448 PAS fold 183 292 4.1E-10 T 11-10-2018 IPR013656 PAS fold-4 Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 SMART SM00091 45 115 63.0 T 11-10-2018 IPR000014 PAS domain Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 SMART SM00091 177 242 7.3E-6 T 11-10-2018 IPR000014 PAS domain Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 Gene3D G3DSA:3.30.450.20 175 298 7.7E-31 T 11-10-2018 Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 Gene3D G3DSA:3.30.450.20 42 174 2.6E-17 T 11-10-2018 Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 SMART SM00448 546 657 4.6E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 SUPERFAMILY SSF55785 163 289 1.22E-15 T 11-10-2018 IPR035965 PAS domain superfamily Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 416 526 1.7E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 8.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 467 8.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 481 8.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 8.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_1750 b13a348e7e280e9f46b595ec53a873c6 660 Gene3D G3DSA:1.10.287.130 299 369 2.2E-15 T 11-10-2018 Patl_2295 f3c9106f95fd05ccf615581534491965 343 Gene3D G3DSA:2.40.160.10 23 343 8.6E-11 T 11-10-2018 IPR023614 Porin domain superfamily Patl_2295 f3c9106f95fd05ccf615581534491965 343 Pfam PF13609 Gram-negative porin 7 325 3.0E-18 T 11-10-2018 Patl_2295 f3c9106f95fd05ccf615581534491965 343 SUPERFAMILY SSF56935 21 343 9.16E-19 T 11-10-2018 Patl_0663 67a6ba1768d85782fbe5ac85e9a3edf7 277 SUPERFAMILY SSF53335 7 270 2.6E-72 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_0663 67a6ba1768d85782fbe5ac85e9a3edf7 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 52 65 4.3E-19 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Patl_0663 67a6ba1768d85782fbe5ac85e9a3edf7 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 177 189 4.3E-19 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Patl_0663 67a6ba1768d85782fbe5ac85e9a3edf7 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 12 28 4.3E-19 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Patl_0663 67a6ba1768d85782fbe5ac85e9a3edf7 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 33 47 4.3E-19 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Patl_0663 67a6ba1768d85782fbe5ac85e9a3edf7 277 Gene3D G3DSA:1.10.1020.10 59 158 2.3E-82 T 11-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 Patl_0663 67a6ba1768d85782fbe5ac85e9a3edf7 277 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 12 242 7.2E-63 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Patl_0663 67a6ba1768d85782fbe5ac85e9a3edf7 277 PIRSF PIRSF000398 3 276 2.0E-64 T 11-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 Patl_0663 67a6ba1768d85782fbe5ac85e9a3edf7 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Patl_0663 67a6ba1768d85782fbe5ac85e9a3edf7 277 TIGRFAM TIGR00571 dam: DNA adenine methylase 7 270 1.0E-91 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Patl_0663 67a6ba1768d85782fbe5ac85e9a3edf7 277 Gene3D G3DSA:3.40.50.150 9 241 2.3E-82 T 11-10-2018 Patl_0492 c84d706f39e55a3b4e8e5743a786d976 422 ProSitePatterns PS01219 Ammonium transporters signature. 176 201 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Patl_0492 c84d706f39e55a3b4e8e5743a786d976 422 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 9 418 1.3E-209 T 11-10-2018 IPR019879 Ammonium transporter, marine subtype Patl_0492 c84d706f39e55a3b4e8e5743a786d976 422 SUPERFAMILY SSF111352 9 396 6.54E-99 T 11-10-2018 Patl_0492 c84d706f39e55a3b4e8e5743a786d976 422 Gene3D G3DSA:1.10.3430.10 2 421 1.3E-115 T 11-10-2018 IPR029020 Ammonium/urea transporter Patl_0492 c84d706f39e55a3b4e8e5743a786d976 422 Pfam PF00909 Ammonium Transporter Family 16 415 4.6E-94 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Patl_2098 ce64d44161d70fd3eb031d54b50d1c88 285 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 4 278 8.4E-63 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Patl_2098 ce64d44161d70fd3eb031d54b50d1c88 285 Pfam PF01545 Cation efflux family 10 198 2.2E-41 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Patl_2098 ce64d44161d70fd3eb031d54b50d1c88 285 SUPERFAMILY SSF161111 3 199 1.22E-48 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Patl_2098 ce64d44161d70fd3eb031d54b50d1c88 285 Gene3D G3DSA:1.20.1510.10 2 198 7.5E-53 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Patl_2098 ce64d44161d70fd3eb031d54b50d1c88 285 Gene3D G3DSA:3.30.70.1350 206 278 4.0E-13 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Patl_2098 ce64d44161d70fd3eb031d54b50d1c88 285 Pfam PF16916 Dimerisation domain of Zinc Transporter 212 276 1.7E-13 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain Patl_2098 ce64d44161d70fd3eb031d54b50d1c88 285 SUPERFAMILY SSF160240 205 277 3.14E-14 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Patl_1522 59f3ba44bfd8704ab91721c3d9827d94 189 Pfam PF08281 Sigma-70, region 4 130 180 4.2E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_1522 59f3ba44bfd8704ab91721c3d9827d94 189 Gene3D G3DSA:1.10.10.10 99 188 1.2E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1522 59f3ba44bfd8704ab91721c3d9827d94 189 SUPERFAMILY SSF88946 15 103 6.67E-10 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Patl_1522 59f3ba44bfd8704ab91721c3d9827d94 189 Gene3D G3DSA:1.10.1740.10 5 94 2.0E-8 T 11-10-2018 Patl_1522 59f3ba44bfd8704ab91721c3d9827d94 189 SUPERFAMILY SSF88659 105 186 2.16E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_1522 59f3ba44bfd8704ab91721c3d9827d94 189 Pfam PF04542 Sigma-70 region 2 26 97 2.3E-4 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Patl_1522 59f3ba44bfd8704ab91721c3d9827d94 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 183 4.6E-22 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Patl_0455 8755983cc38df4e18bc9c4c601b1c523 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 207 1.7E-100 T 11-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 Patl_0455 8755983cc38df4e18bc9c4c601b1c523 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 195 1.8E-58 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Patl_0455 8755983cc38df4e18bc9c4c601b1c523 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 35.963 T 11-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 Patl_0455 8755983cc38df4e18bc9c4c601b1c523 210 PIRSF PIRSF006102 3 210 5.8E-68 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Patl_1248 e05c1fa25cb7661300d12073ada838de 263 Hamap MF_01974 Methionine aminopeptidase [map]. 3 252 42.107 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Patl_1248 e05c1fa25cb7661300d12073ada838de 263 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 251 8.3E-99 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Patl_1248 e05c1fa25cb7661300d12073ada838de 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 71 84 7.7E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Patl_1248 e05c1fa25cb7661300d12073ada838de 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 7.7E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Patl_1248 e05c1fa25cb7661300d12073ada838de 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 7.7E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Patl_1248 e05c1fa25cb7661300d12073ada838de 263 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 7.7E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Patl_1248 e05c1fa25cb7661300d12073ada838de 263 Pfam PF00557 Metallopeptidase family M24 12 243 5.9E-56 T 11-10-2018 IPR000994 Peptidase M24 Patl_1248 e05c1fa25cb7661300d12073ada838de 263 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Patl_1248 e05c1fa25cb7661300d12073ada838de 263 Gene3D G3DSA:3.90.230.10 2 261 4.4E-114 T 11-10-2018 Patl_1248 e05c1fa25cb7661300d12073ada838de 263 SUPERFAMILY SSF55920 4 255 1.44E-92 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like Patl_1771 1b91b94726a9cb3088830c8f33d99fd6 362 SMART SM00267 168 358 6.0E-39 T 11-10-2018 IPR000160 GGDEF domain Patl_1771 1b91b94726a9cb3088830c8f33d99fd6 362 Gene3D G3DSA:3.30.70.270 175 360 5.3E-46 T 11-10-2018 Patl_1771 1b91b94726a9cb3088830c8f33d99fd6 362 SUPERFAMILY SSF55073 187 358 2.51E-37 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_1771 1b91b94726a9cb3088830c8f33d99fd6 362 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 180 289 6.6E-27 T 11-10-2018 IPR000160 GGDEF domain Patl_1771 1b91b94726a9cb3088830c8f33d99fd6 362 Pfam PF00990 Diguanylate cyclase, GGDEF domain 183 292 1.7E-23 T 11-10-2018 IPR000160 GGDEF domain Patl_1771 1b91b94726a9cb3088830c8f33d99fd6 362 Pfam PF00990 Diguanylate cyclase, GGDEF domain 306 353 1.0E-6 T 11-10-2018 IPR000160 GGDEF domain Patl_0631 189541ea94c87774d0819b922faa59d4 247 SUPERFAMILY SSF53850 26 236 1.3E-17 T 11-10-2018 Patl_0631 189541ea94c87774d0819b922faa59d4 247 Gene3D G3DSA:3.40.190.10 117 210 2.0E-12 T 11-10-2018 Patl_0631 189541ea94c87774d0819b922faa59d4 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 49 236 7.9E-7 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_0631 189541ea94c87774d0819b922faa59d4 247 Gene3D G3DSA:3.40.190.10 27 235 2.0E-12 T 11-10-2018 Patl_3751 ad632b04bd7bb5d912ac8e53c90fe910 222 Pfam PF01323 DSBA-like thioredoxin domain 6 208 4.0E-35 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Patl_3751 ad632b04bd7bb5d912ac8e53c90fe910 222 Gene3D G3DSA:3.40.30.10 1 212 5.7E-67 T 11-10-2018 Patl_3751 ad632b04bd7bb5d912ac8e53c90fe910 222 SUPERFAMILY SSF52833 2 213 2.61E-50 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_1362 404dcda73475a41a88ca8cc934cf36ce 294 Gene3D G3DSA:1.10.1040.10 171 294 3.7E-39 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Patl_1362 404dcda73475a41a88ca8cc934cf36ce 294 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 172 293 3.4E-33 T 11-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain Patl_1362 404dcda73475a41a88ca8cc934cf36ce 294 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 144 2.7E-21 T 11-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain Patl_1362 404dcda73475a41a88ca8cc934cf36ce 294 Gene3D G3DSA:3.40.50.720 1 170 1.6E-41 T 11-10-2018 Patl_1362 404dcda73475a41a88ca8cc934cf36ce 294 SUPERFAMILY SSF51735 1 170 3.6E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1362 404dcda73475a41a88ca8cc934cf36ce 294 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 293 3.2E-69 T 11-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 Patl_1362 404dcda73475a41a88ca8cc934cf36ce 294 SUPERFAMILY SSF48179 172 292 1.77E-31 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_0048 99dee118ac5aba380b17de7184fd9a5e 78 Gene3D G3DSA:2.30.170.40 2 78 2.5E-31 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0048 99dee118ac5aba380b17de7184fd9a5e 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 20.69 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0048 99dee118ac5aba380b17de7184fd9a5e 78 SUPERFAMILY SSF143800 2 77 3.34E-29 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0048 99dee118ac5aba380b17de7184fd9a5e 78 Pfam PF00830 Ribosomal L28 family 3 62 5.4E-25 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0048 99dee118ac5aba380b17de7184fd9a5e 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 3.2E-26 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_3765 65ed27163d5209eb300156409293bfe8 97 Pfam PF01381 Helix-turn-helix 28 66 9.0E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_3765 65ed27163d5209eb300156409293bfe8 97 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 83 3.8E-30 T 11-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 Patl_3765 65ed27163d5209eb300156409293bfe8 97 Gene3D G3DSA:1.10.260.40 1 95 1.1E-28 T 11-10-2018 Patl_3765 65ed27163d5209eb300156409293bfe8 97 SUPERFAMILY SSF47413 8 90 2.55E-23 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_2949 cb08e8a921efd4adcb23c058e3a395ff 300 Pfam PF01904 Protein of unknown function DUF72 21 265 4.1E-52 T 11-10-2018 IPR002763 Protein of unknown function DUF72 Patl_2949 cb08e8a921efd4adcb23c058e3a395ff 300 SUPERFAMILY SSF117396 2 266 5.1E-64 T 11-10-2018 IPR036520 UPF0759 superfamily Patl_2949 cb08e8a921efd4adcb23c058e3a395ff 300 Gene3D G3DSA:3.20.20.410 1 266 4.5E-40 T 11-10-2018 IPR036520 UPF0759 superfamily Patl_2017 aa5857f50d8cf58452e4e5a7aa20b45b 144 Gene3D G3DSA:1.10.3210.10 19 142 3.1E-41 T 11-10-2018 Patl_2017 aa5857f50d8cf58452e4e5a7aa20b45b 144 SUPERFAMILY SSF109604 20 129 1.49E-19 T 11-10-2018 Patl_2017 aa5857f50d8cf58452e4e5a7aa20b45b 144 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 24 120 5.0E-50 T 11-10-2018 Patl_2208 05f1030299c23e127735a912dde0c099 152 Pfam PF02130 Uncharacterized protein family UPF0054 20 143 1.0E-37 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Patl_2208 05f1030299c23e127735a912dde0c099 152 Gene3D G3DSA:3.40.390.30 2 152 1.3E-53 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 Patl_2208 05f1030299c23e127735a912dde0c099 152 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site Patl_2208 05f1030299c23e127735a912dde0c099 152 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 23.628 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Patl_2208 05f1030299c23e127735a912dde0c099 152 SUPERFAMILY SSF55486 3 149 1.47E-48 T 11-10-2018 Patl_2208 05f1030299c23e127735a912dde0c099 152 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 1.1E-35 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Patl_3977 ab8a8abab83adef5226a221522708cad 315 Gene3D G3DSA:1.10.20.140 120 191 3.0E-106 T 11-10-2018 Patl_3977 ab8a8abab83adef5226a221522708cad 315 Gene3D G3DSA:3.40.50.300 17 297 3.0E-106 T 11-10-2018 Patl_3977 ab8a8abab83adef5226a221522708cad 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 13 298 1.2E-110 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Patl_3977 ab8a8abab83adef5226a221522708cad 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 13 309 30.341 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Patl_3977 ab8a8abab83adef5226a221522708cad 315 SUPERFAMILY SSF52540 14 157 2.52E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3977 ab8a8abab83adef5226a221522708cad 315 Pfam PF01715 IPP transferase 47 292 1.5E-87 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Patl_1486 bc417e4238e95a1ee5faab021514d096 677 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 145 2.2E-22 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1486 bc417e4238e95a1ee5faab021514d096 677 Gene3D G3DSA:2.170.130.10 23 150 5.3E-34 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_1486 bc417e4238e95a1ee5faab021514d096 677 Pfam PF00593 TonB dependent receptor 181 674 7.5E-27 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1486 bc417e4238e95a1ee5faab021514d096 677 Gene3D G3DSA:2.40.170.20 181 676 6.8E-42 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_1486 bc417e4238e95a1ee5faab021514d096 677 SUPERFAMILY SSF56935 24 676 1.77E-80 T 11-10-2018 Patl_0433 96f78f6c01d9a40a969ee46b63993f9f 250 Gene3D G3DSA:3.60.21.10 1 250 8.7E-50 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Patl_0433 96f78f6c01d9a40a969ee46b63993f9f 250 Pfam PF00149 Calcineurin-like phosphoesterase 3 196 2.7E-17 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Patl_0433 96f78f6c01d9a40a969ee46b63993f9f 250 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 3 250 35.053 T 11-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 Patl_0433 96f78f6c01d9a40a969ee46b63993f9f 250 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 208 250 0.003 T 11-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 Patl_0433 96f78f6c01d9a40a969ee46b63993f9f 250 SUPERFAMILY SSF56300 3 249 1.74E-40 T 11-10-2018 Patl_4265 54d65a98970f43736d18682c833bc4f6 474 Pfam PF06119 Nidogen-like 206 296 6.3E-20 T 11-10-2018 IPR003886 NIDO domain GO:0007160 Patl_4265 54d65a98970f43736d18682c833bc4f6 474 SMART SM00539 131 300 3.5E-11 T 11-10-2018 IPR003886 NIDO domain GO:0007160 Patl_1870 d437d671537999a543d4eb125711b122 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 4.6E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_1870 d437d671537999a543d4eb125711b122 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 4.6E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_1870 d437d671537999a543d4eb125711b122 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 4.6E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_1870 d437d671537999a543d4eb125711b122 218 SUPERFAMILY SSF52172 1 132 2.56E-26 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1870 d437d671537999a543d4eb125711b122 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_1870 d437d671537999a543d4eb125711b122 218 Gene3D G3DSA:3.40.50.12740 3 207 8.9E-51 T 11-10-2018 Patl_1870 d437d671537999a543d4eb125711b122 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 204 2.5E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_1870 d437d671537999a543d4eb125711b122 218 Pfam PF00072 Response regulator receiver domain 4 116 1.7E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1870 d437d671537999a543d4eb125711b122 218 SMART SM00421 150 207 2.3E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_1870 d437d671537999a543d4eb125711b122 218 SUPERFAMILY SSF46894 141 205 3.74E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_1870 d437d671537999a543d4eb125711b122 218 SMART SM00448 2 116 3.4E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2655 26fe89239253091b05c0d5f7c3296c0b 166 Gene3D G3DSA:3.10.180.10 2 154 1.0E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2655 26fe89239253091b05c0d5f7c3296c0b 166 SUPERFAMILY SSF54593 6 157 2.42E-25 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2655 26fe89239253091b05c0d5f7c3296c0b 166 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 152 8.7E-9 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Patl_2655 26fe89239253091b05c0d5f7c3296c0b 166 TIGRFAM TIGR03645 glyox_marine: lactoylglutathione lyase family protein 5 166 8.2E-103 T 11-10-2018 IPR019883 Lactoylglutathione lyase Patl_1488 08fd06097c2266ac9fd167388d72ab3e 310 Gene3D G3DSA:3.40.50.1980 170 309 9.6E-32 T 11-10-2018 Patl_1488 08fd06097c2266ac9fd167388d72ab3e 310 SUPERFAMILY SSF53807 38 297 1.41E-44 T 11-10-2018 Patl_1488 08fd06097c2266ac9fd167388d72ab3e 310 Pfam PF01497 Periplasmic binding protein 39 273 2.0E-33 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain Patl_1488 08fd06097c2266ac9fd167388d72ab3e 310 Gene3D G3DSA:3.40.50.1980 33 169 1.2E-34 T 11-10-2018 Patl_3662 79ec6c0174879ee2e92357c4a0db73ba 395 Gene3D G3DSA:3.30.9.30 37 360 4.6E-117 T 11-10-2018 Patl_3662 79ec6c0174879ee2e92357c4a0db73ba 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 9.1E-17 T 11-10-2018 Patl_3662 79ec6c0174879ee2e92357c4a0db73ba 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 319 9.1E-17 T 11-10-2018 Patl_3662 79ec6c0174879ee2e92357c4a0db73ba 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 303 9.1E-17 T 11-10-2018 Patl_3662 79ec6c0174879ee2e92357c4a0db73ba 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 9.1E-17 T 11-10-2018 Patl_3662 79ec6c0174879ee2e92357c4a0db73ba 395 SUPERFAMILY SSF54373 180 278 1.28E-17 T 11-10-2018 Patl_3662 79ec6c0174879ee2e92357c4a0db73ba 395 SUPERFAMILY SSF51905 3 363 2.43E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3662 79ec6c0174879ee2e92357c4a0db73ba 395 Gene3D G3DSA:3.50.50.60 5 352 4.6E-117 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3662 79ec6c0174879ee2e92357c4a0db73ba 395 Pfam PF01494 FAD binding domain 4 347 1.9E-30 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 Patl_2496 b561a7b24334bb195887c003d57ab822 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 3.0E-14 T 11-10-2018 Patl_2496 b561a7b24334bb195887c003d57ab822 118 Gene3D G3DSA:1.10.720.90 2 55 3.0E-24 T 11-10-2018 Patl_2496 b561a7b24334bb195887c003d57ab822 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.192 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2496 b561a7b24334bb195887c003d57ab822 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 3.3E-53 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2496 b561a7b24334bb195887c003d57ab822 118 Pfam PF00453 Ribosomal protein L20 3 109 1.0E-50 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2496 b561a7b24334bb195887c003d57ab822 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2496 b561a7b24334bb195887c003d57ab822 118 Gene3D G3DSA:1.10.1900.20 56 118 5.5E-30 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2496 b561a7b24334bb195887c003d57ab822 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2496 b561a7b24334bb195887c003d57ab822 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2496 b561a7b24334bb195887c003d57ab822 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2496 b561a7b24334bb195887c003d57ab822 118 SUPERFAMILY SSF74731 3 117 2.62E-51 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3676 e187ee5c18e117ff7931f74825968ca3 238 Pfam PF00535 Glycosyl transferase family 2 4 160 1.2E-23 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Patl_3676 e187ee5c18e117ff7931f74825968ca3 238 Gene3D G3DSA:3.90.550.10 1 233 4.1E-30 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3676 e187ee5c18e117ff7931f74825968ca3 238 SUPERFAMILY SSF53448 2 209 1.25E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_0462 01220d380a33e2d949cce8afcdb404f5 292 Gene3D G3DSA:3.60.15.10 35 251 7.8E-47 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_0462 01220d380a33e2d949cce8afcdb404f5 292 SMART SM00849 52 226 1.2E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_0462 01220d380a33e2d949cce8afcdb404f5 292 SUPERFAMILY SSF56281 32 279 1.19E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_0462 01220d380a33e2d949cce8afcdb404f5 292 Pfam PF00753 Metallo-beta-lactamase superfamily 53 223 1.9E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_3645 853b5e2898b0146e4d565e200d9cb504 357 Pfam PF08787 Alginate lyase 37 349 2.1E-72 T 11-10-2018 IPR014895 Alginate lyase 2 Patl_3645 853b5e2898b0146e4d565e200d9cb504 357 SUPERFAMILY SSF49899 37 347 5.7E-41 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Patl_3645 853b5e2898b0146e4d565e200d9cb504 357 Gene3D G3DSA:2.60.120.1610 52 357 6.7E-90 T 11-10-2018 Patl_0338 dae97f183a3cd1a525bfafbe2c24b822 339 Pfam PF02112 cAMP phosphodiesterases class-II 37 334 1.7E-53 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 Patl_0338 dae97f183a3cd1a525bfafbe2c24b822 339 ProSitePatterns PS00607 cAMP phosphodiesterases class-II signature. 114 128 - T 11-10-2018 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site GO:0008081 Patl_0338 dae97f183a3cd1a525bfafbe2c24b822 339 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 137 158 7.2E-25 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 Patl_0338 dae97f183a3cd1a525bfafbe2c24b822 339 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 290 301 7.2E-25 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 Patl_0338 dae97f183a3cd1a525bfafbe2c24b822 339 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 245 256 7.2E-25 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 Patl_0338 dae97f183a3cd1a525bfafbe2c24b822 339 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 110 128 7.2E-25 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 Patl_0338 dae97f183a3cd1a525bfafbe2c24b822 339 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 264 277 7.2E-25 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 Patl_0338 dae97f183a3cd1a525bfafbe2c24b822 339 PIRSF PIRSF000962 6 339 9.2E-89 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 Patl_0338 dae97f183a3cd1a525bfafbe2c24b822 339 SUPERFAMILY SSF56281 104 338 7.47E-18 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_0338 dae97f183a3cd1a525bfafbe2c24b822 339 Gene3D G3DSA:3.60.15.10 35 338 1.4E-18 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 SUPERFAMILY SSF57783 4 101 2.89E-38 T 11-10-2018 Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 Gene3D G3DSA:3.90.980.10 118 243 7.8E-44 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 Pfam PF10410 DnaB-helicase binding domain of primase 374 424 6.6E-6 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 Gene3D G3DSA:3.90.580.10 1 102 1.2E-39 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 Pfam PF01807 CHC2 zinc finger 6 101 3.2E-41 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 TIGRFAM TIGR01391 dnaG: DNA primase 4 422 2.6E-149 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 SMART SM00493 262 333 3.6E-21 T 11-10-2018 IPR006171 TOPRIM domain Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 SMART SM00766 459 584 1.1E-20 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 Pfam PF13662 Toprim domain 264 330 2.7E-15 T 11-10-2018 IPR006171 TOPRIM domain Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 Gene3D G3DSA:1.10.860.10 450 588 1.3E-31 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 Pfam PF08278 DNA primase DnaG DnaB-binding 461 583 4.1E-26 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 Gene3D G3DSA:1.20.50.20 372 428 2.7E-9 T 11-10-2018 Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 PIRSF PIRSF002811 2 587 1.8E-146 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 SUPERFAMILY SSF56731 119 427 6.93E-106 T 11-10-2018 Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 SMART SM00400 36 90 3.0E-38 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 Hamap MF_00974 DNA primase [dnaG]. 4 584 28.795 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 SUPERFAMILY SSF117023 456 587 1.7E-32 T 11-10-2018 Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 Gene3D G3DSA:3.40.1360.10 244 371 2.3E-42 T 11-10-2018 Patl_1039 ade13b3e63ffb8580f813c1d2f159727 588 Pfam PF08275 DNA primase catalytic core, N-terminal domain 128 255 2.7E-42 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Patl_3624 9fe524ddf4a22e9034700e4bcff1c0d1 363 Pfam PF13515 Fusaric acid resistance protein-like 208 339 1.5E-7 T 11-10-2018 Patl_3624 9fe524ddf4a22e9034700e4bcff1c0d1 363 Pfam PF11168 Protein of unknown function (DUF2955) 31 170 7.9E-48 T 11-10-2018 IPR022604 Protein of unknown function DUF2955 Patl_3624 9fe524ddf4a22e9034700e4bcff1c0d1 363 PIRSF PIRSF029594 24 359 9.1E-120 T 11-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 Patl_1441 e05824035c5fbcc8cfa0c0bdf6b7065e 283 SUPERFAMILY SSF51182 61 272 5.02E-19 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_1441 e05824035c5fbcc8cfa0c0bdf6b7065e 283 Pfam PF14499 Domain of unknown function (DUF4437) 33 276 9.1E-109 T 11-10-2018 IPR028013 Protein of unknown function DUF4437 Patl_1441 e05824035c5fbcc8cfa0c0bdf6b7065e 283 Gene3D G3DSA:2.60.120.10 27 280 6.8E-21 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_3392 4ecd7e18cf38b016e4c842fce3c542b7 285 SUPERFAMILY SSF56112 19 221 5.49E-18 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Patl_3392 4ecd7e18cf38b016e4c842fce3c542b7 285 SMART SM00090 5 234 7.0E-10 T 11-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 Patl_3392 4ecd7e18cf38b016e4c842fce3c542b7 285 Gene3D G3DSA:1.10.510.10 132 279 5.2E-18 T 11-10-2018 Patl_3392 4ecd7e18cf38b016e4c842fce3c542b7 285 Pfam PF01163 RIO1 family 31 219 3.2E-41 T 11-10-2018 Patl_3392 4ecd7e18cf38b016e4c842fce3c542b7 285 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 11-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 Patl_3696 40777980ea2cd07eb713e0c1e62706e5 192 Pfam PF04972 BON domain 126 191 1.9E-15 T 11-10-2018 IPR007055 BON domain Patl_3696 40777980ea2cd07eb713e0c1e62706e5 192 Pfam PF04972 BON domain 48 115 5.6E-12 T 11-10-2018 IPR007055 BON domain Patl_3696 40777980ea2cd07eb713e0c1e62706e5 192 SMART SM00749 53 116 11.0 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Patl_3696 40777980ea2cd07eb713e0c1e62706e5 192 SMART SM00749 131 188 0.15 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Patl_2364 889b582fc359f07ea3b618358acfe27b 235 SMART SM00479 2 176 4.0E-45 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Patl_2364 889b582fc359f07ea3b618358acfe27b 235 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 234 3.8E-96 T 11-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_2364 889b582fc359f07ea3b618358acfe27b 235 Pfam PF00929 Exonuclease 4 167 3.7E-39 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Patl_2364 889b582fc359f07ea3b618358acfe27b 235 SUPERFAMILY SSF53098 1 177 1.88E-56 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_2364 889b582fc359f07ea3b618358acfe27b 235 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 216 1.6E-69 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_2364 889b582fc359f07ea3b618358acfe27b 235 Gene3D G3DSA:3.30.420.10 1 181 3.9E-57 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Patl_0478 f3790290eb3b2ca3598cd7cffe22aa9f 83 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 1.3E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0478 f3790290eb3b2ca3598cd7cffe22aa9f 83 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 1.3E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0478 f3790290eb3b2ca3598cd7cffe22aa9f 83 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 1.3E-12 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0478 f3790290eb3b2ca3598cd7cffe22aa9f 83 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 81 24.196 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0478 f3790290eb3b2ca3598cd7cffe22aa9f 83 Gene3D G3DSA:2.40.50.140 2 83 7.4E-36 T 11-10-2018 Patl_0478 f3790290eb3b2ca3598cd7cffe22aa9f 83 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 77 2.0E-37 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0478 f3790290eb3b2ca3598cd7cffe22aa9f 83 Pfam PF00366 Ribosomal protein S17 11 77 3.7E-32 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0478 f3790290eb3b2ca3598cd7cffe22aa9f 83 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 77 1.3E-36 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0478 f3790290eb3b2ca3598cd7cffe22aa9f 83 SUPERFAMILY SSF50249 7 83 3.3E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_2180 806d9470394d1136b005daba53ba82ad 869 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 179 3.6E-19 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_2180 806d9470394d1136b005daba53ba82ad 869 Gene3D G3DSA:2.40.170.20 381 869 4.2E-54 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_2180 806d9470394d1136b005daba53ba82ad 869 Gene3D G3DSA:2.170.130.10 37 183 1.1E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_2180 806d9470394d1136b005daba53ba82ad 869 SUPERFAMILY SSF56935 41 869 7.02E-99 T 11-10-2018 Patl_2180 806d9470394d1136b005daba53ba82ad 869 Pfam PF00593 TonB dependent receptor 384 858 4.6E-37 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0650 d1327b46cc64e4dba62c1c5fb42f68e5 344 Gene3D G3DSA:3.40.630.30 1 273 2.4E-119 T 11-10-2018 Patl_0650 d1327b46cc64e4dba62c1c5fb42f68e5 344 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 338 4.6E-145 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 Patl_0650 d1327b46cc64e4dba62c1c5fb42f68e5 344 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 339 6.5E-141 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 Patl_0650 d1327b46cc64e4dba62c1c5fb42f68e5 344 SUPERFAMILY SSF55729 1 339 7.14E-134 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_0650 d1327b46cc64e4dba62c1c5fb42f68e5 344 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 8.4E-144 T 11-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 Patl_2582 63e379016e4d70733f89a1530995f22b 148 SUPERFAMILY SSF53850 23 143 2.66E-6 T 11-10-2018 Patl_1051 b8976da9b9f5d9bc915979958858e516 301 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 299 34.128 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 Patl_1051 b8976da9b9f5d9bc915979958858e516 301 Pfam PF04381 Putative exonuclease, RdgC 1 295 2.3E-109 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 Patl_1633 148670ba0667afc257415779fb15498a 279 Gene3D G3DSA:2.70.98.10 2 279 1.4E-77 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Patl_1633 148670ba0667afc257415779fb15498a 279 SUPERFAMILY SSF74650 4 278 5.27E-59 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Patl_1633 148670ba0667afc257415779fb15498a 279 PIRSF PIRSF016020 5 279 2.2E-57 T 11-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 Patl_1633 148670ba0667afc257415779fb15498a 279 Pfam PF01263 Aldose 1-epimerase 20 278 3.0E-38 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 Patl_2549 adad376d9532645a12583bf9ba3d0795 203 Pfam PF07729 FCD domain 86 194 6.2E-17 T 11-10-2018 IPR011711 GntR, C-terminal Patl_2549 adad376d9532645a12583bf9ba3d0795 203 SUPERFAMILY SSF46785 10 77 7.44E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2549 adad376d9532645a12583bf9ba3d0795 203 SMART SM00895 84 203 9.4E-4 T 11-10-2018 IPR011711 GntR, C-terminal Patl_2549 adad376d9532645a12583bf9ba3d0795 203 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 2.4E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2549 adad376d9532645a12583bf9ba3d0795 203 Gene3D G3DSA:1.20.120.530 83 203 1.0E-17 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_2549 adad376d9532645a12583bf9ba3d0795 203 SMART SM00345 15 73 3.6E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_2549 adad376d9532645a12583bf9ba3d0795 203 Gene3D G3DSA:1.10.10.10 7 74 5.9E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2549 adad376d9532645a12583bf9ba3d0795 203 SUPERFAMILY SSF48008 86 200 1.33E-18 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_1285 fb0e8b78b9eac685918417083d6f118f 253 SUPERFAMILY SSF50346 10 114 2.35E-25 T 11-10-2018 IPR011033 PRC-barrel-like superfamily Patl_1285 fb0e8b78b9eac685918417083d6f118f 253 Gene3D G3DSA:2.30.30.240 134 227 2.8E-11 T 11-10-2018 Patl_1285 fb0e8b78b9eac685918417083d6f118f 253 SUPERFAMILY SSF50346 102 245 3.73E-18 T 11-10-2018 IPR011033 PRC-barrel-like superfamily Patl_1285 fb0e8b78b9eac685918417083d6f118f 253 Gene3D G3DSA:3.90.50.10 3 114 2.0E-15 T 11-10-2018 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal GO:0019684|GO:0030077|GO:0045156 Patl_1285 fb0e8b78b9eac685918417083d6f118f 253 Pfam PF05239 PRC-barrel domain 149 201 1.7E-5 T 11-10-2018 IPR027275 PRC-barrel domain Patl_2966 89b429b990ac7ee2cd7816edbfcf32c2 188 SUPERFAMILY SSF54862 41 177 8.38E-30 T 11-10-2018 Patl_2966 89b429b990ac7ee2cd7816edbfcf32c2 188 Pfam PF04060 Putative Fe-S cluster 47 78 1.2E-13 T 11-10-2018 IPR007202 4Fe-4S domain GO:0051536 Patl_2966 89b429b990ac7ee2cd7816edbfcf32c2 188 Gene3D G3DSA:3.30.70.20 86 183 1.9E-22 T 11-10-2018 Patl_2966 89b429b990ac7ee2cd7816edbfcf32c2 188 Pfam PF14697 4Fe-4S dicluster domain 111 165 9.6E-19 T 11-10-2018 Patl_2966 89b429b990ac7ee2cd7816edbfcf32c2 188 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 7 170 25.497 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Patl_2966 89b429b990ac7ee2cd7816edbfcf32c2 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 118 129 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Patl_2966 89b429b990ac7ee2cd7816edbfcf32c2 188 Gene3D G3DSA:1.10.15.40 40 85 8.0E-8 T 11-10-2018 Patl_2966 89b429b990ac7ee2cd7816edbfcf32c2 188 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 6 186 4.4E-87 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 Patl_2966 89b429b990ac7ee2cd7816edbfcf32c2 188 PIRSF PIRSF005784 6 188 2.7E-87 T 11-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 Patl_2966 89b429b990ac7ee2cd7816edbfcf32c2 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Patl_3992 141b175682aad5ba577cccf503c71936 718 Pfam PF00990 Diguanylate cyclase, GGDEF domain 284 435 5.9E-33 T 11-10-2018 IPR000160 GGDEF domain Patl_3992 141b175682aad5ba577cccf503c71936 718 Gene3D G3DSA:3.30.450.20 158 274 4.3E-9 T 11-10-2018 Patl_3992 141b175682aad5ba577cccf503c71936 718 SUPERFAMILY SSF55073 288 443 8.24E-38 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3992 141b175682aad5ba577cccf503c71936 718 SUPERFAMILY SSF55785 165 273 3.24E-9 T 11-10-2018 IPR035965 PAS domain superfamily Patl_3992 141b175682aad5ba577cccf503c71936 718 SUPERFAMILY SSF141868 456 703 4.58E-88 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3992 141b175682aad5ba577cccf503c71936 718 Gene3D G3DSA:3.30.70.270 278 453 2.7E-42 T 11-10-2018 Patl_3992 141b175682aad5ba577cccf503c71936 718 SMART SM00267 272 441 5.4E-39 T 11-10-2018 IPR000160 GGDEF domain Patl_3992 141b175682aad5ba577cccf503c71936 718 Pfam PF00563 EAL domain 457 691 6.1E-72 T 11-10-2018 IPR001633 EAL domain Patl_3992 141b175682aad5ba577cccf503c71936 718 SMART SM00052 451 696 1.9E-110 T 11-10-2018 IPR001633 EAL domain Patl_3992 141b175682aad5ba577cccf503c71936 718 Gene3D G3DSA:3.20.20.450 454 711 1.6E-96 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3992 141b175682aad5ba577cccf503c71936 718 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 280 439 2.5E-28 T 11-10-2018 IPR000160 GGDEF domain Patl_2034 ec30470efb5c9b5c7d0911eb8c0e0939 409 Pfam PF00155 Aminotransferase class I and II 36 383 2.4E-53 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Patl_2034 ec30470efb5c9b5c7d0911eb8c0e0939 409 SUPERFAMILY SSF53383 4 402 3.09E-92 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_2034 ec30470efb5c9b5c7d0911eb8c0e0939 409 Gene3D G3DSA:3.40.640.10 53 294 4.8E-139 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_2034 ec30470efb5c9b5c7d0911eb8c0e0939 409 Gene3D G3DSA:3.90.1150.10 21 398 4.8E-139 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_2320 c5624d12eb1751d734fe206b2db0b572 291 SUPERFAMILY SSF102198 31 277 1.83E-59 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Patl_2320 c5624d12eb1751d734fe206b2db0b572 291 Pfam PF04199 Putative cyclase 35 186 4.0E-35 T 11-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Patl_2343 addbcf5b333046968843e08751c31fcc 165 SMART SM00065 26 165 0.006 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_2343 addbcf5b333046968843e08751c31fcc 165 SUPERFAMILY SSF55781 28 154 4.17E-22 T 11-10-2018 Patl_2343 addbcf5b333046968843e08751c31fcc 165 Pfam PF01590 GAF domain 28 156 6.1E-10 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_2343 addbcf5b333046968843e08751c31fcc 165 Gene3D G3DSA:3.30.450.40 8 158 6.5E-17 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_2733 3a40236d88bdbf9a553159383bd60886 337 Gene3D G3DSA:3.20.20.370 7 307 6.6E-59 T 11-10-2018 Patl_2733 3a40236d88bdbf9a553159383bd60886 337 Pfam PF01522 Polysaccharide deacetylase 65 174 5.6E-11 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Patl_2733 3a40236d88bdbf9a553159383bd60886 337 SUPERFAMILY SSF88713 6 298 6.67E-60 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Patl_0316 20946c73f45e4d7c250f0a56021278b4 320 Pfam PF03060 Nitronate monooxygenase 13 304 1.8E-23 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Patl_0316 20946c73f45e4d7c250f0a56021278b4 320 Gene3D G3DSA:3.20.20.70 8 316 1.5E-65 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_0316 20946c73f45e4d7c250f0a56021278b4 320 SUPERFAMILY SSF51412 6 261 6.04E-53 T 11-10-2018 Patl_3670 6a3843afc464ca1156f30b6871eae5de 197 Gene3D G3DSA:1.10.357.10 3 194 1.5E-35 T 11-10-2018 Patl_3670 6a3843afc464ca1156f30b6871eae5de 197 SUPERFAMILY SSF48498 79 192 1.44E-21 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Patl_3670 6a3843afc464ca1156f30b6871eae5de 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 6.4E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_3670 6a3843afc464ca1156f30b6871eae5de 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 6.4E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_3670 6a3843afc464ca1156f30b6871eae5de 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 1.7E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_3670 6a3843afc464ca1156f30b6871eae5de 197 SUPERFAMILY SSF46689 5 80 3.8E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_3660 51a45f0902ad6148aa754af636ec3e2a 245 SMART SM00345 10 69 1.3E-23 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_3660 51a45f0902ad6148aa754af636ec3e2a 245 SMART SM00895 86 208 1.9E-21 T 11-10-2018 IPR011711 GntR, C-terminal Patl_3660 51a45f0902ad6148aa754af636ec3e2a 245 Gene3D G3DSA:1.20.120.530 84 217 2.0E-22 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_3660 51a45f0902ad6148aa754af636ec3e2a 245 SUPERFAMILY SSF48008 84 215 1.1E-21 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_3660 51a45f0902ad6148aa754af636ec3e2a 245 Pfam PF07729 FCD domain 86 207 2.8E-20 T 11-10-2018 IPR011711 GntR, C-terminal Patl_3660 51a45f0902ad6148aa754af636ec3e2a 245 Gene3D G3DSA:1.10.10.10 1 70 2.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3660 51a45f0902ad6148aa754af636ec3e2a 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 6.2E-21 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_3660 51a45f0902ad6148aa754af636ec3e2a 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 2.9E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_3660 51a45f0902ad6148aa754af636ec3e2a 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 2.9E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_3660 51a45f0902ad6148aa754af636ec3e2a 245 SUPERFAMILY SSF46785 3 73 1.85E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2923 1f6fa5f10266b9c958742a66807f12c1 394 Gene3D G3DSA:3.40.47.10 128 389 9.0E-140 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_2923 1f6fa5f10266b9c958742a66807f12c1 394 PIRSF PIRSF000429 1 394 2.7E-111 T 11-10-2018 IPR002155 Thiolase GO:0016747 Patl_2923 1f6fa5f10266b9c958742a66807f12c1 394 Pfam PF00108 Thiolase, N-terminal domain 6 263 4.3E-86 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Patl_2923 1f6fa5f10266b9c958742a66807f12c1 394 SUPERFAMILY SSF53901 271 392 3.49E-40 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_2923 1f6fa5f10266b9c958742a66807f12c1 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 391 7.3E-128 T 11-10-2018 IPR002155 Thiolase GO:0016747 Patl_2923 1f6fa5f10266b9c958742a66807f12c1 394 Pfam PF02803 Thiolase, C-terminal domain 270 391 1.4E-43 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Patl_2923 1f6fa5f10266b9c958742a66807f12c1 394 SUPERFAMILY SSF53901 6 269 4.09E-79 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_2923 1f6fa5f10266b9c958742a66807f12c1 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Patl_2923 1f6fa5f10266b9c958742a66807f12c1 394 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 Patl_2923 1f6fa5f10266b9c958742a66807f12c1 394 Gene3D G3DSA:3.40.47.10 8 276 9.0E-140 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_3710 8d2ef6cdb24e8a48187d14d483903558 240 Gene3D G3DSA:2.40.50.140 4 78 1.1E-28 T 11-10-2018 Patl_3710 8d2ef6cdb24e8a48187d14d483903558 240 Pfam PF02565 Recombination protein O C terminal 83 226 2.5E-27 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Patl_3710 8d2ef6cdb24e8a48187d14d483903558 240 SUPERFAMILY SSF50249 5 77 5.82E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_3710 8d2ef6cdb24e8a48187d14d483903558 240 Pfam PF11967 Recombination protein O N terminal 5 77 5.0E-22 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal Patl_3710 8d2ef6cdb24e8a48187d14d483903558 240 Hamap MF_00201 DNA repair protein RecO [recO]. 2 231 21.649 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Patl_3710 8d2ef6cdb24e8a48187d14d483903558 240 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 158 8.2E-33 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Patl_3710 8d2ef6cdb24e8a48187d14d483903558 240 SUPERFAMILY SSF57863 86 161 4.18E-11 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger Patl_3710 8d2ef6cdb24e8a48187d14d483903558 240 Gene3D G3DSA:1.20.1440.120 80 238 1.7E-47 T 11-10-2018 Patl_0448 2ea4bb79674ed66362f689bf563b8494 210 Gene3D G3DSA:2.60.120.590 13 209 2.6E-65 T 11-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily Patl_0448 2ea4bb79674ed66362f689bf563b8494 210 SUPERFAMILY SSF51197 17 205 1.17E-63 T 11-10-2018 Patl_0448 2ea4bb79674ed66362f689bf563b8494 210 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 25 202 2.7E-31 T 11-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like Patl_4170 ab608cd449a619a74eb3d5c763e551c2 526 Gene3D G3DSA:1.20.1730.10 26 524 8.6E-98 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Patl_4170 ab608cd449a619a74eb3d5c763e551c2 526 Pfam PF00474 Sodium:solute symporter family 37 469 5.8E-29 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_4034 55c2c6cb3bb6946aa2905b21df2af276 169 Pfam PF03167 Uracil DNA glycosylase superfamily 10 159 1.6E-30 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Patl_4034 55c2c6cb3bb6946aa2905b21df2af276 169 SUPERFAMILY SSF52141 2 167 3.6E-52 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Patl_4034 55c2c6cb3bb6946aa2905b21df2af276 169 SMART SM00987 8 162 3.6E-29 T 11-10-2018 Patl_4034 55c2c6cb3bb6946aa2905b21df2af276 169 SMART SM00986 8 162 3.6E-29 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Patl_4034 55c2c6cb3bb6946aa2905b21df2af276 169 Gene3D G3DSA:3.40.470.10 1 169 1.6E-66 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Patl_1069 675ef9c596509bec131a592f4efd1b4b 912 Gene3D G3DSA:2.60.120.260 375 547 5.1E-7 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_1069 675ef9c596509bec131a592f4efd1b4b 912 SUPERFAMILY SSF48208 562 905 8.84E-86 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Patl_1069 675ef9c596509bec131a592f4efd1b4b 912 PRINTS PR00735 Glycosyl hydrolase family 8 signature 583 596 3.0E-7 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Patl_1069 675ef9c596509bec131a592f4efd1b4b 912 PRINTS PR00735 Glycosyl hydrolase family 8 signature 884 898 3.0E-7 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Patl_1069 675ef9c596509bec131a592f4efd1b4b 912 PRINTS PR00735 Glycosyl hydrolase family 8 signature 644 662 3.0E-7 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Patl_1069 675ef9c596509bec131a592f4efd1b4b 912 Pfam PF01270 Glycosyl hydrolases family 8 580 896 3.9E-26 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Patl_1069 675ef9c596509bec131a592f4efd1b4b 912 Gene3D G3DSA:1.50.10.10 556 899 7.0E-110 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Patl_0585 8f82ca56c3aa69b6ea3af24e51e5dcc5 274 Gene3D G3DSA:3.40.190.10 119 213 4.7E-20 T 11-10-2018 Patl_0585 8f82ca56c3aa69b6ea3af24e51e5dcc5 274 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 253 8.1E-16 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_0585 8f82ca56c3aa69b6ea3af24e51e5dcc5 274 SUPERFAMILY SSF53850 40 254 8.58E-26 T 11-10-2018 Patl_0585 8f82ca56c3aa69b6ea3af24e51e5dcc5 274 Gene3D G3DSA:3.40.190.10 43 252 4.7E-20 T 11-10-2018 Patl_2067 6885b8ed57eae75d5d93fb686a0b1e72 82 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 2.6E-20 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type Patl_2067 6885b8ed57eae75d5d93fb686a0b1e72 82 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 1.9E-13 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type Patl_3779 9af43df2da739f975aa44af10a6319ff 638 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 386 500 1.8E-8 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Patl_3779 9af43df2da739f975aa44af10a6319ff 638 SUPERFAMILY SSF53901 164 384 1.65E-27 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_3779 9af43df2da739f975aa44af10a6319ff 638 Gene3D G3DSA:3.40.47.10 145 605 6.7E-83 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_3779 9af43df2da739f975aa44af10a6319ff 638 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 156 373 4.0E-13 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Patl_3779 9af43df2da739f975aa44af10a6319ff 638 SUPERFAMILY SSF53901 346 550 1.2E-28 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_3779 9af43df2da739f975aa44af10a6319ff 638 SMART SM00825 Beta-ketoacyl synthase 168 554 5.2E-4 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Patl_1854 74c7b18b94c364b16f0276bed0ed1515 96 Pfam PF03795 YCII-related domain 1 85 9.5E-11 T 11-10-2018 IPR005545 YCII-related Patl_1854 74c7b18b94c364b16f0276bed0ed1515 96 SUPERFAMILY SSF54909 1 88 6.43E-18 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_1854 74c7b18b94c364b16f0276bed0ed1515 96 Gene3D G3DSA:3.30.70.1060 1 89 6.5E-15 T 11-10-2018 Patl_1937 6bbfc5d5d2db1a902785adf4a2ba46b8 125 SUPERFAMILY SSF54593 4 123 2.01E-17 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_1937 6bbfc5d5d2db1a902785adf4a2ba46b8 125 Gene3D G3DSA:3.10.180.10 5 124 1.3E-22 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_3572 feaae6716180ddf62a8ad6526792e878 417 Gene3D G3DSA:1.10.287.130 187 253 1.6E-14 T 11-10-2018 Patl_3572 feaae6716180ddf62a8ad6526792e878 417 SMART SM00388 198 258 8.1E-4 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_3572 feaae6716180ddf62a8ad6526792e878 417 Gene3D G3DSA:3.30.565.10 263 416 1.9E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3572 feaae6716180ddf62a8ad6526792e878 417 SMART SM00387 301 411 3.4E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3572 feaae6716180ddf62a8ad6526792e878 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 364 9.4E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3572 feaae6716180ddf62a8ad6526792e878 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 408 9.4E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3572 feaae6716180ddf62a8ad6526792e878 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 389 9.4E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3572 feaae6716180ddf62a8ad6526792e878 417 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 350 9.4E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_3572 feaae6716180ddf62a8ad6526792e878 417 SUPERFAMILY SSF47384 181 253 1.31E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_3572 feaae6716180ddf62a8ad6526792e878 417 SUPERFAMILY SSF55874 248 410 1.05E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3572 feaae6716180ddf62a8ad6526792e878 417 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 302 408 3.1E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2939 07bb111359a334ba041d32361f078287 451 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 4 446 49.287 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Patl_2939 07bb111359a334ba041d32361f078287 451 Pfam PF07676 WD40-like Beta Propeller Repeat 223 248 2.2E-6 T 11-10-2018 IPR011659 WD40-like Beta Propeller Patl_2939 07bb111359a334ba041d32361f078287 451 Pfam PF07676 WD40-like Beta Propeller Repeat 300 336 8.2E-14 T 11-10-2018 IPR011659 WD40-like Beta Propeller Patl_2939 07bb111359a334ba041d32361f078287 451 Pfam PF07676 WD40-like Beta Propeller Repeat 391 412 0.19 T 11-10-2018 IPR011659 WD40-like Beta Propeller Patl_2939 07bb111359a334ba041d32361f078287 451 Pfam PF07676 WD40-like Beta Propeller Repeat 257 292 4.3E-8 T 11-10-2018 IPR011659 WD40-like Beta Propeller Patl_2939 07bb111359a334ba041d32361f078287 451 Gene3D G3DSA:3.40.50.10070 19 182 3.1E-46 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 Patl_2939 07bb111359a334ba041d32361f078287 451 SUPERFAMILY SSF52964 28 179 2.09E-39 T 11-10-2018 Patl_2939 07bb111359a334ba041d32361f078287 451 Pfam PF04052 TolB amino-terminal domain 23 125 1.9E-31 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 Patl_2939 07bb111359a334ba041d32361f078287 451 Gene3D G3DSA:2.120.10.30 183 450 2.0E-94 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Patl_2939 07bb111359a334ba041d32361f078287 451 SUPERFAMILY SSF69304 173 448 6.8E-58 T 11-10-2018 Patl_2939 07bb111359a334ba041d32361f078287 451 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 447 6.1E-160 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 Patl_3966 542674bfaf51f41a91f197b144c206ea 338 Gene3D G3DSA:3.40.50.1100 9 311 9.0E-92 T 11-10-2018 Patl_3966 542674bfaf51f41a91f197b144c206ea 338 Gene3D G3DSA:3.40.50.1100 52 148 9.0E-92 T 11-10-2018 Patl_3966 542674bfaf51f41a91f197b144c206ea 338 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 306 3.1E-66 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Patl_3966 542674bfaf51f41a91f197b144c206ea 338 PIRSF PIRSF006278 51 323 7.6E-9 T 11-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase Patl_3966 542674bfaf51f41a91f197b144c206ea 338 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 44 57 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Patl_3966 542674bfaf51f41a91f197b144c206ea 338 SUPERFAMILY SSF53686 5 315 2.23E-77 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Patl_1471 256abfa635bedcd56daecc1a0eea51fc 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 9.3E-19 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Patl_1471 256abfa635bedcd56daecc1a0eea51fc 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 9.3E-19 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Patl_1471 256abfa635bedcd56daecc1a0eea51fc 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 9.3E-19 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Patl_1471 256abfa635bedcd56daecc1a0eea51fc 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 9.3E-19 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Patl_1471 256abfa635bedcd56daecc1a0eea51fc 258 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 36.782 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Patl_1471 256abfa635bedcd56daecc1a0eea51fc 258 Gene3D G3DSA:3.90.230.10 1 257 1.8E-98 T 11-10-2018 Patl_1471 256abfa635bedcd56daecc1a0eea51fc 258 Pfam PF00557 Metallopeptidase family M24 12 242 2.4E-47 T 11-10-2018 IPR000994 Peptidase M24 Patl_1471 256abfa635bedcd56daecc1a0eea51fc 258 SUPERFAMILY SSF55920 4 258 4.19E-82 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like Patl_1471 256abfa635bedcd56daecc1a0eea51fc 258 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 250 1.6E-86 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Patl_1471 256abfa635bedcd56daecc1a0eea51fc 258 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Patl_1124 c11c57136b046fef5b13ca2afd93bd7a 176 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 135 5.5E-18 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Patl_1124 c11c57136b046fef5b13ca2afd93bd7a 176 Gene3D G3DSA:3.10.180.10 1 169 5.1E-34 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_1124 c11c57136b046fef5b13ca2afd93bd7a 176 SUPERFAMILY SSF54593 1 139 5.1E-36 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_0682 0b12db65c545555ceeb6632175ca8fad 230 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 70 89 1.5E-13 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Patl_0682 0b12db65c545555ceeb6632175ca8fad 230 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 182 196 1.5E-13 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Patl_0682 0b12db65c545555ceeb6632175ca8fad 230 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 159 181 1.5E-13 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Patl_0682 0b12db65c545555ceeb6632175ca8fad 230 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 24 36 1.5E-13 T 11-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Patl_0682 0b12db65c545555ceeb6632175ca8fad 230 Pfam PF01555 DNA methylase 156 213 5.8E-14 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Patl_0682 0b12db65c545555ceeb6632175ca8fad 230 Pfam PF01555 DNA methylase 24 141 3.6E-12 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Patl_0682 0b12db65c545555ceeb6632175ca8fad 230 Gene3D G3DSA:3.40.50.150 4 221 1.8E-40 T 11-10-2018 Patl_0682 0b12db65c545555ceeb6632175ca8fad 230 SUPERFAMILY SSF53335 3 220 1.92E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_0273 56fdebac20e25009dc47b13e93818382 294 Gene3D G3DSA:1.10.10.10 2 88 1.3E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0273 56fdebac20e25009dc47b13e93818382 294 SUPERFAMILY SSF53850 90 293 1.81E-35 T 11-10-2018 Patl_0273 56fdebac20e25009dc47b13e93818382 294 SUPERFAMILY SSF46785 3 85 6.19E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0273 56fdebac20e25009dc47b13e93818382 294 Gene3D G3DSA:3.40.190.290 91 291 9.9E-49 T 11-10-2018 Patl_0273 56fdebac20e25009dc47b13e93818382 294 Pfam PF03466 LysR substrate binding domain 89 291 9.7E-33 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_0273 56fdebac20e25009dc47b13e93818382 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 7.4E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1408 1279c5986c9030e94a07dbcbefde9c8b 606 Gene3D G3DSA:2.40.110.10 161 287 3.5E-27 T 11-10-2018 Patl_1408 1279c5986c9030e94a07dbcbefde9c8b 606 Gene3D G3DSA:1.10.540.10 13 159 4.9E-18 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Patl_1408 1279c5986c9030e94a07dbcbefde9c8b 606 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 484 599 6.8E-33 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Patl_1408 1279c5986c9030e94a07dbcbefde9c8b 606 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 157 5.8E-13 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Patl_1408 1279c5986c9030e94a07dbcbefde9c8b 606 SUPERFAMILY SSF56645 39 278 7.85E-58 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_1408 1279c5986c9030e94a07dbcbefde9c8b 606 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 9.4E-8 T 11-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria Patl_1408 1279c5986c9030e94a07dbcbefde9c8b 606 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 5.7E-18 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Patl_1408 1279c5986c9030e94a07dbcbefde9c8b 606 SUPERFAMILY SSF47203 287 464 8.7E-45 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_1408 1279c5986c9030e94a07dbcbefde9c8b 606 Gene3D G3DSA:1.20.140.10 288 460 1.3E-41 T 11-10-2018 Patl_1408 1279c5986c9030e94a07dbcbefde9c8b 606 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 451 1.8E-20 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_2251 a0e194b898b124cbf152d5d91529380e 240 SMART SM00862 162 236 2.6E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_2251 a0e194b898b124cbf152d5d91529380e 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 235 1.7E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_2251 a0e194b898b124cbf152d5d91529380e 240 SMART SM00448 19 130 2.1E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2251 a0e194b898b124cbf152d5d91529380e 240 Gene3D G3DSA:3.40.50.2300 8 140 2.5E-37 T 11-10-2018 Patl_2251 a0e194b898b124cbf152d5d91529380e 240 Gene3D G3DSA:1.10.10.10 141 240 7.5E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2251 a0e194b898b124cbf152d5d91529380e 240 SUPERFAMILY SSF52172 14 140 3.27E-39 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2251 a0e194b898b124cbf152d5d91529380e 240 SUPERFAMILY SSF46894 138 236 2.24E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_2251 a0e194b898b124cbf152d5d91529380e 240 Pfam PF00072 Response regulator receiver domain 21 131 1.2E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3963 0a32e58549cd8f0e99194f5acf03f6d5 110 Pfam PF12514 Protein of unknown function (DUF3718) 42 106 4.0E-6 T 11-10-2018 IPR022193 Protein of unknown function DUF3718 Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 154 7.4E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 194 360 2.0E-25 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 Gene3D G3DSA:3.30.300.20 370 452 5.2E-21 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 Pfam PF01926 50S ribosome-binding GTPase 197 314 2.9E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 Pfam PF01926 50S ribosome-binding GTPase 5 119 6.8E-27 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 SMART SM00382 193 340 0.17 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 SMART SM00382 1 141 0.22 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 Gene3D G3DSA:3.40.50.300 192 367 1.1E-48 T 11-10-2018 Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 450 1.1E-176 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 370 450 1.2E-26 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.3E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 5.3E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 PIRSF PIRSF006485 1 458 2.2E-176 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 Hamap MF_00195 GTPase Der [der]. 2 453 38.48 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 SUPERFAMILY SSF52540 4 168 2.84E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 SUPERFAMILY SSF52540 182 456 1.02E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3122 2400f6ecd72edf1fbfb1f2583fa5316c 482 Gene3D G3DSA:3.40.50.300 2 159 9.5E-42 T 11-10-2018 Patl_1222 22289f8cb788d7dbe74e0d032d79fdb6 215 Pfam PF10679 Protein of unknown function (DUF2491) 1 212 3.0E-83 T 11-10-2018 IPR019621 Protein of unknown function DUF2491 Patl_1828 256a7cee389688e631d4ea724cfccc19 298 SUPERFAMILY SSF53474 19 295 1.56E-90 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1828 256a7cee389688e631d4ea724cfccc19 298 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 20 295 7.4E-119 T 11-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 Patl_1828 256a7cee389688e631d4ea724cfccc19 298 Gene3D G3DSA:3.40.50.1820 18 297 1.4E-96 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1828 256a7cee389688e631d4ea724cfccc19 298 Pfam PF00756 Putative esterase 37 289 2.9E-63 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Patl_2797 728a2217d5c48942cd84f71d757fb64f 503 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 13 232 1.4E-55 T 11-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein Patl_2797 728a2217d5c48942cd84f71d757fb64f 503 Gene3D G3DSA:3.40.50.620 14 236 2.7E-86 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_2797 728a2217d5c48942cd84f71d757fb64f 503 Gene3D G3DSA:1.25.40.80 137 325 2.7E-86 T 11-10-2018 Patl_2797 728a2217d5c48942cd84f71d757fb64f 503 Pfam PF03441 FAD binding domain of DNA photolyase 315 432 1.1E-4 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 Patl_2797 728a2217d5c48942cd84f71d757fb64f 503 Gene3D G3DSA:1.10.579.10 329 445 5.3E-50 T 11-10-2018 Patl_2797 728a2217d5c48942cd84f71d757fb64f 503 SUPERFAMILY SSF48173 234 480 7.85E-51 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Patl_2797 728a2217d5c48942cd84f71d757fb64f 503 Gene3D G3DSA:1.10.10.1710 446 503 8.1E-13 T 11-10-2018 Patl_3877 596f152441f61aee0799ef4a95df75c6 300 SUPERFAMILY SSF103481 39 137 2.88E-15 T 11-10-2018 Patl_3877 596f152441f61aee0799ef4a95df75c6 300 SUPERFAMILY SSF103481 185 282 8.37E-18 T 11-10-2018 Patl_3877 596f152441f61aee0799ef4a95df75c6 300 Pfam PF00892 EamA-like transporter family 152 282 2.3E-21 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Patl_3877 596f152441f61aee0799ef4a95df75c6 300 Pfam PF00892 EamA-like transporter family 10 136 7.3E-22 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Patl_2801 539d220cca4656e30927175f4324891d 331 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 32 328 5.3E-105 T 11-10-2018 IPR011970 Lytic murein transglycosylase Patl_2801 539d220cca4656e30927175f4324891d 331 Gene3D G3DSA:1.10.530.10 74 324 1.2E-85 T 11-10-2018 Patl_2801 539d220cca4656e30927175f4324891d 331 Gene3D G3DSA:1.10.8.350 45 207 1.2E-85 T 11-10-2018 Patl_2801 539d220cca4656e30927175f4324891d 331 Pfam PF13406 Transglycosylase SLT domain 32 325 5.4E-103 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 Patl_2801 539d220cca4656e30927175f4324891d 331 SUPERFAMILY SSF53955 26 329 1.16E-93 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Patl_0263 750c2b2830ff44add6ccfda2c55056f7 59 Pfam PF07043 Protein of unknown function (DUF1328) 8 45 9.3E-9 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Patl_0263 750c2b2830ff44add6ccfda2c55056f7 59 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 3 38 14.022 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Patl_0263 750c2b2830ff44add6ccfda2c55056f7 59 PIRSF PIRSF036466 3 57 4.5E-15 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Patl_0988 f6111d0dd8d11173654e469f8e4f6f2c 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 311 2.7E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_0988 f6111d0dd8d11173654e469f8e4f6f2c 467 SUPERFAMILY SSF47384 227 312 2.35E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_0988 f6111d0dd8d11173654e469f8e4f6f2c 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 445 2.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0988 f6111d0dd8d11173654e469f8e4f6f2c 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 2.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0988 f6111d0dd8d11173654e469f8e4f6f2c 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 420 2.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0988 f6111d0dd8d11173654e469f8e4f6f2c 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 464 2.2E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0988 f6111d0dd8d11173654e469f8e4f6f2c 467 SMART SM00388 244 312 6.0E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_0988 f6111d0dd8d11173654e469f8e4f6f2c 467 SUPERFAMILY SSF55874 302 465 2.75E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0988 f6111d0dd8d11173654e469f8e4f6f2c 467 SMART SM00387 357 467 8.9E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0988 f6111d0dd8d11173654e469f8e4f6f2c 467 Gene3D G3DSA:3.30.565.10 317 466 1.5E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0988 f6111d0dd8d11173654e469f8e4f6f2c 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 358 464 1.4E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0988 f6111d0dd8d11173654e469f8e4f6f2c 467 Gene3D G3DSA:1.10.287.130 193 313 4.7E-30 T 11-10-2018 Patl_0988 f6111d0dd8d11173654e469f8e4f6f2c 467 Pfam PF00672 HAMP domain 189 239 8.9E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_0988 f6111d0dd8d11173654e469f8e4f6f2c 467 SMART SM00304 189 243 4.8E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_0988 f6111d0dd8d11173654e469f8e4f6f2c 467 SUPERFAMILY SSF158472 189 241 9.68E-9 T 11-10-2018 Patl_3398 daae1eebf166c0608790e40eda89b3b2 114 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 34 52 - T 11-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 Patl_3398 daae1eebf166c0608790e40eda89b3b2 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 2.6E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Patl_3398 daae1eebf166c0608790e40eda89b3b2 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 2.6E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Patl_3398 daae1eebf166c0608790e40eda89b3b2 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 32 43 2.6E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Patl_3398 daae1eebf166c0608790e40eda89b3b2 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 2.6E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Patl_3398 daae1eebf166c0608790e40eda89b3b2 114 SMART SM00418 10 88 2.6E-26 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Patl_3398 daae1eebf166c0608790e40eda89b3b2 114 Gene3D G3DSA:1.10.10.10 6 109 3.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3398 daae1eebf166c0608790e40eda89b3b2 114 SUPERFAMILY SSF46785 8 87 1.41E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3398 daae1eebf166c0608790e40eda89b3b2 114 Pfam PF01022 Bacterial regulatory protein, arsR family 17 59 1.4E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Patl_0562 f879e5cc57118ab2c56ee749d9df6b6b 320 Gene3D G3DSA:1.20.1420.30 35 310 1.7E-84 T 11-10-2018 Patl_0562 f879e5cc57118ab2c56ee749d9df6b6b 320 Gene3D G3DSA:1.20.58.1130 9 205 1.7E-84 T 11-10-2018 Patl_0562 f879e5cc57118ab2c56ee749d9df6b6b 320 Pfam PF01699 Sodium/calcium exchanger protein 173 316 2.0E-31 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Patl_0562 f879e5cc57118ab2c56ee749d9df6b6b 320 Pfam PF01699 Sodium/calcium exchanger protein 5 139 1.8E-25 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Patl_0562 f879e5cc57118ab2c56ee749d9df6b6b 320 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 6 312 1.9E-76 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 Patl_3197 3102f752f9b4ca3c2708bb0fbc9136ad 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 330 5.4E-107 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Patl_3197 3102f752f9b4ca3c2708bb0fbc9136ad 335 SUPERFAMILY SSF53659 2 335 1.15E-124 T 11-10-2018 Patl_3197 3102f752f9b4ca3c2708bb0fbc9136ad 335 SMART SM01329 5 331 1.1E-178 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Patl_3197 3102f752f9b4ca3c2708bb0fbc9136ad 335 Gene3D G3DSA:3.40.718.10 1 335 3.4E-141 T 11-10-2018 Patl_3197 3102f752f9b4ca3c2708bb0fbc9136ad 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Patl_4117 99557349ddf4778e9451c1012d5dbaf8 290 SUPERFAMILY SSF161098 55 278 1.13E-46 T 11-10-2018 IPR035906 MetI-like superfamily Patl_4117 99557349ddf4778e9451c1012d5dbaf8 290 SUPERFAMILY SSF160964 5 42 4.71E-5 T 11-10-2018 Patl_4117 99557349ddf4778e9451c1012d5dbaf8 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 288 1.2E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Patl_4117 99557349ddf4778e9451c1012d5dbaf8 290 Gene3D G3DSA:1.10.3720.10 49 287 2.1E-51 T 11-10-2018 IPR035906 MetI-like superfamily Patl_1197 cce7991090b75b3aca5027b119400df3 374 Pfam PF13439 Glycosyltransferase Family 4 21 180 1.2E-21 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Patl_1197 cce7991090b75b3aca5027b119400df3 374 SUPERFAMILY SSF53756 10 371 4.45E-71 T 11-10-2018 Patl_1197 cce7991090b75b3aca5027b119400df3 374 Gene3D G3DSA:3.40.50.2000 21 364 8.1E-66 T 11-10-2018 Patl_1197 cce7991090b75b3aca5027b119400df3 374 Gene3D G3DSA:3.40.50.2000 177 354 8.1E-66 T 11-10-2018 Patl_1197 cce7991090b75b3aca5027b119400df3 374 Pfam PF00534 Glycosyl transferases group 1 192 348 1.9E-29 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Patl_0792 547ddc986400b9bf816e70068b06395f 442 SUPERFAMILY SSF81901 64 178 1.7E-7 T 11-10-2018 Patl_1867 01a7a2393e0632efc2c4919e784c3768 448 Pfam PF11902 Protein of unknown function (DUF3422) 33 441 4.1E-144 T 11-10-2018 IPR021830 Protein of unknown function DUF3422 Patl_3832 ad9bf10a96c603905be3f98215e7bc4f 326 Pfam PF12048 Protein of unknown function (DUF3530) 41 322 1.1E-72 T 11-10-2018 IPR022529 Protein of unknown function DUF3530 Patl_3382 0d744cb169d10ab8f5ef64ce84cfe105 398 Gene3D G3DSA:1.20.1250.20 197 385 1.7E-22 T 11-10-2018 Patl_3382 0d744cb169d10ab8f5ef64ce84cfe105 398 Gene3D G3DSA:1.20.1250.20 3 188 6.7E-20 T 11-10-2018 Patl_3382 0d744cb169d10ab8f5ef64ce84cfe105 398 SUPERFAMILY SSF103473 4 388 5.62E-48 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_3382 0d744cb169d10ab8f5ef64ce84cfe105 398 Pfam PF07690 Major Facilitator Superfamily 10 325 1.6E-29 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_1635 3ae969fa7bea5f201cb2eba4984df3fb 731 Gene3D G3DSA:3.20.20.80 176 723 1.1E-113 T 11-10-2018 Patl_1635 3ae969fa7bea5f201cb2eba4984df3fb 731 SUPERFAMILY SSF51445 178 721 2.11E-141 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_1635 3ae969fa7bea5f201cb2eba4984df3fb 731 Pfam PF02446 4-alpha-glucanotransferase 184 703 3.5E-121 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Patl_1635 3ae969fa7bea5f201cb2eba4984df3fb 731 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 138 720 1.6E-185 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Patl_0339 3ccfbf8bae6cfddd30f6050b9bdc2336 393 SUPERFAMILY SSF48452 300 386 4.62E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0339 3ccfbf8bae6cfddd30f6050b9bdc2336 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 382 4.5E-71 T 11-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 Patl_0339 3ccfbf8bae6cfddd30f6050b9bdc2336 393 Pfam PF07219 HemY protein N-terminus 26 128 1.7E-21 T 11-10-2018 IPR010817 HemY, N-terminal Patl_0339 3ccfbf8bae6cfddd30f6050b9bdc2336 393 Gene3D G3DSA:1.25.40.10 152 392 2.4E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2383 f04eebf12cfa66f5506bd1cdb426a923 389 Gene3D G3DSA:1.10.10.2510 205 385 4.9E-24 T 11-10-2018 Patl_2383 f04eebf12cfa66f5506bd1cdb426a923 389 Gene3D G3DSA:2.60.120.650 5 204 2.7E-73 T 11-10-2018 Patl_2383 f04eebf12cfa66f5506bd1cdb426a923 389 SMART SM00558 85 215 1.8E-6 T 11-10-2018 IPR003347 JmjC domain Patl_2383 f04eebf12cfa66f5506bd1cdb426a923 389 SUPERFAMILY SSF51197 4 271 3.85E-64 T 11-10-2018 Patl_2383 f04eebf12cfa66f5506bd1cdb426a923 389 Pfam PF08007 Cupin superfamily protein 11 305 8.1E-77 T 11-10-2018 IPR003347 JmjC domain Patl_3722 224350778552b8ab401a3def76be11c1 435 Gene3D G3DSA:3.40.190.10 181 344 1.9E-21 T 11-10-2018 Patl_3722 224350778552b8ab401a3def76be11c1 435 Pfam PF13416 Bacterial extracellular solute-binding protein 161 343 2.6E-13 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein Patl_3722 224350778552b8ab401a3def76be11c1 435 SUPERFAMILY SSF53850 49 433 8.45E-45 T 11-10-2018 Patl_1140 44dff52154116cffb31a9a5a04420612 340 SUPERFAMILY SSF81345 5 336 3.01E-72 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Patl_1140 44dff52154116cffb31a9a5a04420612 340 Pfam PF01032 FecCD transport family 13 336 1.9E-85 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Patl_1140 44dff52154116cffb31a9a5a04420612 340 Gene3D G3DSA:1.10.3470.10 3 340 9.5E-91 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Patl_1585 98de6716cde14b5332ca3f163c8fcbfb 252 Pfam PF12339 DNA-J related protein 62 176 1.6E-30 T 11-10-2018 IPR021059 DnaJ-related protein, N-terminal Patl_1585 98de6716cde14b5332ca3f163c8fcbfb 252 Gene3D G3DSA:1.10.287.110 188 250 1.8E-9 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Patl_1585 98de6716cde14b5332ca3f163c8fcbfb 252 SUPERFAMILY SSF46565 194 248 7.2E-10 T 11-10-2018 IPR036869 Chaperone J-domain superfamily Patl_2279 35c4486d9d926b1a4251b837b1ff4207 233 Pfam PF01618 MotA/TolQ/ExbB proton channel family 86 191 1.1E-29 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Patl_2920 af3525992ca6d85be5b82121f3adc30a 538 SMART SM00028 168 201 79.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2920 af3525992ca6d85be5b82121f3adc30a 538 SMART SM00028 390 423 420.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2920 af3525992ca6d85be5b82121f3adc30a 538 SMART SM00028 235 268 46.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2920 af3525992ca6d85be5b82121f3adc30a 538 SMART SM00028 448 481 44.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2920 af3525992ca6d85be5b82121f3adc30a 538 Gene3D G3DSA:3.40.50.2300 5 138 3.5E-20 T 11-10-2018 Patl_2920 af3525992ca6d85be5b82121f3adc30a 538 SMART SM00448 9 125 2.9E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2920 af3525992ca6d85be5b82121f3adc30a 538 Pfam PF00072 Response regulator receiver domain 11 124 2.1E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2920 af3525992ca6d85be5b82121f3adc30a 538 SUPERFAMILY SSF52172 9 141 9.68E-21 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2920 af3525992ca6d85be5b82121f3adc30a 538 SUPERFAMILY SSF48452 166 291 3.38E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3284 f86cfa24978300ab82c6e20c2b4c80f4 412 Gene3D G3DSA:3.40.50.300 1 217 6.8E-69 T 11-10-2018 Patl_3284 f86cfa24978300ab82c6e20c2b4c80f4 412 Gene3D G3DSA:3.40.50.300 218 411 7.2E-52 T 11-10-2018 Patl_3284 f86cfa24978300ab82c6e20c2b4c80f4 412 Pfam PF00270 DEAD/DEAH box helicase 24 190 9.3E-45 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Patl_3284 f86cfa24978300ab82c6e20c2b4c80f4 412 SMART SM00490 257 338 2.7E-33 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_3284 f86cfa24978300ab82c6e20c2b4c80f4 412 SUPERFAMILY SSF52540 73 358 1.75E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3284 f86cfa24978300ab82c6e20c2b4c80f4 412 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 1 411 47.739 T 11-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 Patl_3284 f86cfa24978300ab82c6e20c2b4c80f4 412 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site Patl_3284 f86cfa24978300ab82c6e20c2b4c80f4 412 SMART SM00487 19 221 5.4E-55 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Patl_3284 f86cfa24978300ab82c6e20c2b4c80f4 412 SUPERFAMILY SSF52540 24 98 6.2E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3284 f86cfa24978300ab82c6e20c2b4c80f4 412 Pfam PF00271 Helicase conserved C-terminal domain 234 338 2.8E-33 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_1538 495104cc6aaf5475b45b95f53ab81f29 563 Pfam PF00563 EAL domain 312 545 2.6E-71 T 11-10-2018 IPR001633 EAL domain Patl_1538 495104cc6aaf5475b45b95f53ab81f29 563 SMART SM00448 13 125 1.5E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1538 495104cc6aaf5475b45b95f53ab81f29 563 Gene3D G3DSA:3.20.20.450 309 559 1.2E-89 T 11-10-2018 IPR035919 EAL domain superfamily Patl_1538 495104cc6aaf5475b45b95f53ab81f29 563 SUPERFAMILY SSF141868 311 559 6.54E-82 T 11-10-2018 IPR035919 EAL domain superfamily Patl_1538 495104cc6aaf5475b45b95f53ab81f29 563 SUPERFAMILY SSF55073 151 281 4.32E-7 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_1538 495104cc6aaf5475b45b95f53ab81f29 563 SUPERFAMILY SSF52172 14 130 7.4E-29 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1538 495104cc6aaf5475b45b95f53ab81f29 563 Gene3D G3DSA:3.40.50.2300 14 134 2.3E-30 T 11-10-2018 Patl_1538 495104cc6aaf5475b45b95f53ab81f29 563 Gene3D G3DSA:3.30.70.270 138 308 3.0E-7 T 11-10-2018 Patl_1538 495104cc6aaf5475b45b95f53ab81f29 563 Pfam PF00990 Diguanylate cyclase, GGDEF domain 152 277 9.0E-6 T 11-10-2018 IPR000160 GGDEF domain Patl_1538 495104cc6aaf5475b45b95f53ab81f29 563 Pfam PF00072 Response regulator receiver domain 16 125 1.6E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1538 495104cc6aaf5475b45b95f53ab81f29 563 SMART SM00052 305 551 3.2E-99 T 11-10-2018 IPR001633 EAL domain Patl_3144 dd4427a12316ecc6bff23d4d8cf860bc 306 SMART SM00382 26 207 1.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3144 dd4427a12316ecc6bff23d4d8cf860bc 306 SUPERFAMILY SSF52540 2 226 1.07E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3144 dd4427a12316ecc6bff23d4d8cf860bc 306 Pfam PF00005 ABC transporter 18 160 2.5E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_3144 dd4427a12316ecc6bff23d4d8cf860bc 306 Gene3D G3DSA:3.40.50.300 1 235 2.4E-67 T 11-10-2018 Patl_2282 4adfa1dfff320d42af368d7ae8ffb7c1 543 PIRSF PIRSF006294 1 536 3.4E-228 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Patl_2282 4adfa1dfff320d42af368d7ae8ffb7c1 543 SUPERFAMILY SSF68923 7 223 6.28E-90 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Patl_2282 4adfa1dfff320d42af368d7ae8ffb7c1 543 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 261 276 - T 11-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Patl_2282 4adfa1dfff320d42af368d7ae8ffb7c1 543 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 14 534 54.345 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Patl_2282 4adfa1dfff320d42af368d7ae8ffb7c1 543 Gene3D G3DSA:2.170.8.10 45 346 1.7E-236 T 11-10-2018 Patl_2282 4adfa1dfff320d42af368d7ae8ffb7c1 543 SUPERFAMILY SSF53795 225 537 2.01E-128 T 11-10-2018 Patl_2282 4adfa1dfff320d42af368d7ae8ffb7c1 543 Pfam PF01293 Phosphoenolpyruvate carboxykinase 20 487 4.5E-214 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Patl_2282 4adfa1dfff320d42af368d7ae8ffb7c1 543 Gene3D G3DSA:3.90.228.20 231 521 1.7E-236 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Patl_2282 4adfa1dfff320d42af368d7ae8ffb7c1 543 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 2 535 3.9E-273 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 Patl_2282 4adfa1dfff320d42af368d7ae8ffb7c1 543 Gene3D G3DSA:3.40.449.10 21 230 1.7E-236 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Patl_4298 380bbaef9d70b3cbb6a92b0fab638cda 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 3.4E-54 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4298 380bbaef9d70b3cbb6a92b0fab638cda 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4298 380bbaef9d70b3cbb6a92b0fab638cda 177 Gene3D G3DSA:1.10.520.20 2 106 6.9E-38 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4298 380bbaef9d70b3cbb6a92b0fab638cda 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 19.122 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4298 380bbaef9d70b3cbb6a92b0fab638cda 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.3E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4298 380bbaef9d70b3cbb6a92b0fab638cda 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.3E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4298 380bbaef9d70b3cbb6a92b0fab638cda 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.3E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4298 380bbaef9d70b3cbb6a92b0fab638cda 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.3E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4298 380bbaef9d70b3cbb6a92b0fab638cda 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.3E-26 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4298 380bbaef9d70b3cbb6a92b0fab638cda 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 3.4E-59 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4298 380bbaef9d70b3cbb6a92b0fab638cda 177 SUPERFAMILY SSF47928 3 105 6.15E-26 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2786 a195febbbb73211f5d28abd4d3da5104 712 SUPERFAMILY SSF55486 51 709 1.67E-178 T 11-10-2018 Patl_2786 a195febbbb73211f5d28abd4d3da5104 712 Gene3D G3DSA:1.10.1370.10 182 642 8.6E-246 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Patl_2786 a195febbbb73211f5d28abd4d3da5104 712 Gene3D G3DSA:1.10.1370.40 73 704 8.6E-246 T 11-10-2018 Patl_2786 a195febbbb73211f5d28abd4d3da5104 712 Pfam PF01432 Peptidase family M3 267 709 4.6E-132 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Patl_2228 538af97f5d85c81ab8d05dcdddb86436 193 Gene3D G3DSA:2.40.160.20 29 193 1.9E-31 T 11-10-2018 Patl_2228 538af97f5d85c81ab8d05dcdddb86436 193 SUPERFAMILY SSF56925 30 193 2.43E-28 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Patl_2228 538af97f5d85c81ab8d05dcdddb86436 193 Pfam PF13505 Outer membrane protein beta-barrel domain 13 193 3.9E-21 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel Patl_1035 2d23e0a5550a834e69d5a5b74b46b2c7 1474 Pfam PF02225 PA domain 487 578 6.7E-9 T 11-10-2018 IPR003137 PA domain Patl_1035 2d23e0a5550a834e69d5a5b74b46b2c7 1474 Gene3D G3DSA:3.50.30.30 455 601 5.5E-137 T 11-10-2018 Patl_1035 2d23e0a5550a834e69d5a5b74b46b2c7 1474 SUPERFAMILY SSF52743 197 725 3.14E-65 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Patl_1035 2d23e0a5550a834e69d5a5b74b46b2c7 1474 SUPERFAMILY SSF63446 1412 1467 3.27E-7 T 11-10-2018 IPR036439 Dockerin domain superfamily GO:0000272 Patl_1035 2d23e0a5550a834e69d5a5b74b46b2c7 1474 SUPERFAMILY SSF52025 476 586 3.79E-5 T 11-10-2018 Patl_1035 2d23e0a5550a834e69d5a5b74b46b2c7 1474 Gene3D G3DSA:3.40.50.200 223 738 5.5E-137 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Patl_1035 2d23e0a5550a834e69d5a5b74b46b2c7 1474 PRINTS PR00723 Subtilisin serine protease family (S8) signature 221 240 8.0E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Patl_1035 2d23e0a5550a834e69d5a5b74b46b2c7 1474 PRINTS PR00723 Subtilisin serine protease family (S8) signature 659 675 8.0E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Patl_1035 2d23e0a5550a834e69d5a5b74b46b2c7 1474 PRINTS PR00723 Subtilisin serine protease family (S8) signature 304 317 8.0E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related Patl_1035 2d23e0a5550a834e69d5a5b74b46b2c7 1474 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1447 1459 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Patl_1035 2d23e0a5550a834e69d5a5b74b46b2c7 1474 Gene3D G3DSA:1.10.1330.10 1411 1473 1.2E-6 T 11-10-2018 Patl_1035 2d23e0a5550a834e69d5a5b74b46b2c7 1474 Pfam PF00082 Subtilase family 221 699 3.8E-39 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Patl_1035 2d23e0a5550a834e69d5a5b74b46b2c7 1474 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 660 670 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site Patl_1035 2d23e0a5550a834e69d5a5b74b46b2c7 1474 Pfam PF05922 Peptidase inhibitor I9 75 193 6.6E-10 T 11-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 Patl_3536 4dd5bca145c722ae1349ec28d9c28c75 210 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 9.3E-14 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Patl_3536 4dd5bca145c722ae1349ec28d9c28c75 210 Pfam PF03992 Antibiotic biosynthesis monooxygenase 120 184 2.6E-8 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain Patl_3536 4dd5bca145c722ae1349ec28d9c28c75 210 SUPERFAMILY SSF54909 1 89 4.29E-21 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_3536 4dd5bca145c722ae1349ec28d9c28c75 210 SUPERFAMILY SSF54909 115 200 4.03E-14 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_3536 4dd5bca145c722ae1349ec28d9c28c75 210 Gene3D G3DSA:3.30.70.100 2 208 2.9E-39 T 11-10-2018 Patl_0373 5fec9606efa34b30ffec4386fdec0144 290 Hamap MF_00188 Protease HtpX [htpX]. 1 290 25.184 T 11-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 Patl_0373 5fec9606efa34b30ffec4386fdec0144 290 Gene3D G3DSA:3.30.2010.10 72 165 1.7E-35 T 11-10-2018 Patl_0373 5fec9606efa34b30ffec4386fdec0144 290 Pfam PF01435 Peptidase family M48 82 289 6.9E-41 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Patl_1313 661b597462a91b5cb87c5a2d61abcd1e 365 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.809 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Patl_1313 661b597462a91b5cb87c5a2d61abcd1e 365 PIRSF PIRSF001259 1 365 7.4E-130 T 11-10-2018 Patl_1313 661b597462a91b5cb87c5a2d61abcd1e 365 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 2.6E-84 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Patl_1313 661b597462a91b5cb87c5a2d61abcd1e 365 SUPERFAMILY SSF55821 3 201 1.08E-86 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Patl_1313 661b597462a91b5cb87c5a2d61abcd1e 365 Gene3D G3DSA:3.90.870.10 1 205 4.3E-88 T 11-10-2018 Patl_1313 661b597462a91b5cb87c5a2d61abcd1e 365 Gene3D G3DSA:3.40.50.10990 206 365 4.4E-29 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Patl_1313 661b597462a91b5cb87c5a2d61abcd1e 365 Pfam PF00925 GTP cyclohydrolase II 208 364 2.2E-37 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Patl_1313 661b597462a91b5cb87c5a2d61abcd1e 365 SUPERFAMILY SSF142695 205 364 6.15E-46 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Patl_1313 661b597462a91b5cb87c5a2d61abcd1e 365 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 1.5E-74 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Patl_0178 a7c12d358fbc29674a6660b05b03ef6e 188 Pfam PF07963 Prokaryotic N-terminal methylation motif 16 38 1.1E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0178 a7c12d358fbc29674a6660b05b03ef6e 188 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0178 a7c12d358fbc29674a6660b05b03ef6e 188 SUPERFAMILY SSF54523 19 114 3.61E-10 T 11-10-2018 Patl_0178 a7c12d358fbc29674a6660b05b03ef6e 188 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 38 7.7E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0178 a7c12d358fbc29674a6660b05b03ef6e 188 Gene3D G3DSA:3.30.700.10 19 181 4.5E-9 T 11-10-2018 Patl_0790 9fdf4ac5a2e61255b5404efe25844f4b 132 SUPERFAMILY SSF53927 7 130 2.48E-40 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Patl_0790 9fdf4ac5a2e61255b5404efe25844f4b 132 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 10 131 2.0E-40 T 11-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 Patl_0790 9fdf4ac5a2e61255b5404efe25844f4b 132 Gene3D G3DSA:3.40.140.10 1 132 6.7E-44 T 11-10-2018 Patl_0790 9fdf4ac5a2e61255b5404efe25844f4b 132 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 108 2.7E-12 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Patl_0790 9fdf4ac5a2e61255b5404efe25844f4b 132 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 58 98 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Patl_0079 fb5dd9603af739e91d40b8ba1ed3c7b3 343 Gene3D G3DSA:3.40.50.150 1 161 5.4E-47 T 11-10-2018 Patl_0079 fb5dd9603af739e91d40b8ba1ed3c7b3 343 Pfam PF05175 Methyltransferase small domain 174 339 2.4E-48 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Patl_0079 fb5dd9603af739e91d40b8ba1ed3c7b3 343 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 2 343 41.737 T 11-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 Patl_0079 fb5dd9603af739e91d40b8ba1ed3c7b3 343 SUPERFAMILY SSF53335 47 129 5.56E-6 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_0079 fb5dd9603af739e91d40b8ba1ed3c7b3 343 Gene3D G3DSA:3.40.50.150 162 343 6.6E-42 T 11-10-2018 Patl_0079 fb5dd9603af739e91d40b8ba1ed3c7b3 343 Pfam PF08468 Methyltransferase small domain N-terminal 6 161 6.7E-42 T 11-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 Patl_0079 fb5dd9603af739e91d40b8ba1ed3c7b3 343 SUPERFAMILY SSF53335 167 319 2.91E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3199 c845511957f429337afafbb8a7a56dd4 297 Gene3D G3DSA:3.90.550.10 1 297 1.1E-88 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3199 c845511957f429337afafbb8a7a56dd4 297 SUPERFAMILY SSF53448 5 285 9.91E-64 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3199 c845511957f429337afafbb8a7a56dd4 297 Pfam PF00483 Nucleotidyl transferase 6 277 2.1E-29 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Patl_3199 c845511957f429337afafbb8a7a56dd4 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 273 2.6E-113 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Patl_0974 17a28d65ecff0d47a592c4aa1e8c39ad 215 Pfam PF01081 KDPG and KHG aldolase 12 204 6.0E-81 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Patl_0974 17a28d65ecff0d47a592c4aa1e8c39ad 215 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 11 210 2.1E-80 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Patl_0974 17a28d65ecff0d47a592c4aa1e8c39ad 215 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 129 142 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Patl_0974 17a28d65ecff0d47a592c4aa1e8c39ad 215 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 41 50 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Patl_0974 17a28d65ecff0d47a592c4aa1e8c39ad 215 SUPERFAMILY SSF51569 6 209 3.85E-68 T 11-10-2018 Patl_0974 17a28d65ecff0d47a592c4aa1e8c39ad 215 Gene3D G3DSA:3.20.20.70 1 212 7.8E-72 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_3717 df1c5bfd902661782abb9b570bc2b69f 347 Gene3D G3DSA:3.30.450.90 1 100 4.9E-36 T 11-10-2018 Patl_3717 df1c5bfd902661782abb9b570bc2b69f 347 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 1.1E-154 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Patl_3717 df1c5bfd902661782abb9b570bc2b69f 347 Pfam PF00437 Type II/IV secretion system protein 12 269 2.5E-51 T 11-10-2018 IPR001482 Type II/IV secretion system protein Patl_3717 df1c5bfd902661782abb9b570bc2b69f 347 Gene3D G3DSA:3.40.50.300 101 345 2.0E-105 T 11-10-2018 Patl_3717 df1c5bfd902661782abb9b570bc2b69f 347 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 11-10-2018 IPR001482 Type II/IV secretion system protein Patl_3717 df1c5bfd902661782abb9b570bc2b69f 347 SUPERFAMILY SSF52540 5 334 2.21E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0569 53e2415ed0849f5aec2721e0aedbccb8 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 7.4E-34 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Patl_0569 53e2415ed0849f5aec2721e0aedbccb8 95 SUPERFAMILY SSF69754 1 95 4.32E-35 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like Patl_0569 53e2415ed0849f5aec2721e0aedbccb8 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.5E-28 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Patl_0569 53e2415ed0849f5aec2721e0aedbccb8 95 Gene3D G3DSA:3.30.160.100 1 95 5.2E-37 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like Patl_1104 8f40f63aa3c8fe2fbf92f7643d8caf76 455 Gene3D G3DSA:1.10.10.920 363 455 1.7E-25 T 11-10-2018 Patl_1104 8f40f63aa3c8fe2fbf92f7643d8caf76 455 Pfam PF04055 Radical SAM superfamily 56 227 1.8E-20 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Patl_1104 8f40f63aa3c8fe2fbf92f7643d8caf76 455 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 455 1.2E-165 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Patl_1104 8f40f63aa3c8fe2fbf92f7643d8caf76 455 PIRSF PIRSF000167 5 454 7.1E-157 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 Patl_1104 8f40f63aa3c8fe2fbf92f7643d8caf76 455 Gene3D G3DSA:3.80.30.20 3 362 7.3E-120 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Patl_1104 8f40f63aa3c8fe2fbf92f7643d8caf76 455 SUPERFAMILY SSF102114 6 443 1.7E-130 T 11-10-2018 Patl_1104 8f40f63aa3c8fe2fbf92f7643d8caf76 455 SMART SM00729 51 271 1.1E-47 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Patl_0928 33ba36d1643f5a7a6810e0cd0715ad0e 145 Gene3D G3DSA:3.40.630.30 44 143 2.5E-22 T 11-10-2018 Patl_0928 33ba36d1643f5a7a6810e0cd0715ad0e 145 SUPERFAMILY SSF55729 1 138 4.12E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_0928 33ba36d1643f5a7a6810e0cd0715ad0e 145 Pfam PF00583 Acetyltransferase (GNAT) family 38 127 1.7E-12 T 11-10-2018 IPR000182 GNAT domain Patl_0840 77cb613fbc732fd1d15598a37cd74dbf 318 Pfam PF01548 Transposase 11 151 1.5E-20 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Patl_0840 77cb613fbc732fd1d15598a37cd74dbf 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 195 277 2.7E-20 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Patl_1950 77cb613fbc732fd1d15598a37cd74dbf 318 Pfam PF01548 Transposase 11 151 1.5E-20 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Patl_1950 77cb613fbc732fd1d15598a37cd74dbf 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 195 277 2.7E-20 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Patl_3756 77cb613fbc732fd1d15598a37cd74dbf 318 Pfam PF01548 Transposase 11 151 1.5E-20 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Patl_3756 77cb613fbc732fd1d15598a37cd74dbf 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 195 277 2.7E-20 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Patl_2653 77cb613fbc732fd1d15598a37cd74dbf 318 Pfam PF01548 Transposase 11 151 1.5E-20 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Patl_2653 77cb613fbc732fd1d15598a37cd74dbf 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 195 277 2.7E-20 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Patl_1845 77cb613fbc732fd1d15598a37cd74dbf 318 Pfam PF01548 Transposase 11 151 1.5E-20 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Patl_1845 77cb613fbc732fd1d15598a37cd74dbf 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 195 277 2.7E-20 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Patl_0862 77cb613fbc732fd1d15598a37cd74dbf 318 Pfam PF01548 Transposase 11 151 1.5E-20 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Patl_0862 77cb613fbc732fd1d15598a37cd74dbf 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 195 277 2.7E-20 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Patl_1879 f39ce788d005531d9b9f18a98b5c70f8 465 Gene3D G3DSA:3.30.930.10 108 464 2.8E-110 T 11-10-2018 Patl_1879 f39ce788d005531d9b9f18a98b5c70f8 465 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 459 1.6E-85 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1879 f39ce788d005531d9b9f18a98b5c70f8 465 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 6 465 9.4E-200 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 Patl_1879 f39ce788d005531d9b9f18a98b5c70f8 465 SUPERFAMILY SSF50249 15 101 1.89E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_1879 f39ce788d005531d9b9f18a98b5c70f8 465 SUPERFAMILY SSF55681 95 463 4.78E-97 T 11-10-2018 Patl_1879 f39ce788d005531d9b9f18a98b5c70f8 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 219 3.8E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1879 f39ce788d005531d9b9f18a98b5c70f8 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 223 236 3.8E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1879 f39ce788d005531d9b9f18a98b5c70f8 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 380 396 3.8E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1879 f39ce788d005531d9b9f18a98b5c70f8 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 420 434 3.8E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_1879 f39ce788d005531d9b9f18a98b5c70f8 465 Gene3D G3DSA:2.40.50.140 2 103 2.0E-18 T 11-10-2018 Patl_1879 f39ce788d005531d9b9f18a98b5c70f8 465 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 465 45.463 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 Patl_1879 f39ce788d005531d9b9f18a98b5c70f8 465 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 2.0E-9 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Patl_2830 6d30e168126afbf05e319f963f35cc61 226 PRINTS PR00096 Glutamine amidotransferase superfamily signature 195 208 2.4E-13 T 11-10-2018 Patl_2830 6d30e168126afbf05e319f963f35cc61 226 PRINTS PR00096 Glutamine amidotransferase superfamily signature 108 119 2.4E-13 T 11-10-2018 Patl_2830 6d30e168126afbf05e319f963f35cc61 226 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 90 2.4E-13 T 11-10-2018 Patl_2830 6d30e168126afbf05e319f963f35cc61 226 PRINTS PR00097 Anthranilate synthase component II signature 133 141 8.9E-35 T 11-10-2018 Patl_2830 6d30e168126afbf05e319f963f35cc61 226 PRINTS PR00097 Anthranilate synthase component II signature 81 90 8.9E-35 T 11-10-2018 Patl_2830 6d30e168126afbf05e319f963f35cc61 226 PRINTS PR00097 Anthranilate synthase component II signature 195 208 8.9E-35 T 11-10-2018 Patl_2830 6d30e168126afbf05e319f963f35cc61 226 PRINTS PR00097 Anthranilate synthase component II signature 30 44 8.9E-35 T 11-10-2018 Patl_2830 6d30e168126afbf05e319f963f35cc61 226 PRINTS PR00097 Anthranilate synthase component II signature 153 165 8.9E-35 T 11-10-2018 Patl_2830 6d30e168126afbf05e319f963f35cc61 226 PRINTS PR00097 Anthranilate synthase component II signature 108 119 8.9E-35 T 11-10-2018 Patl_2830 6d30e168126afbf05e319f963f35cc61 226 Gene3D G3DSA:3.40.50.880 28 219 1.5E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_2830 6d30e168126afbf05e319f963f35cc61 226 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 29 214 6.1E-48 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Patl_2830 6d30e168126afbf05e319f963f35cc61 226 Pfam PF00117 Glutamine amidotransferase class-I 32 215 1.1E-40 T 11-10-2018 IPR017926 Glutamine amidotransferase Patl_2830 6d30e168126afbf05e319f963f35cc61 226 SUPERFAMILY SSF52317 29 218 5.82E-44 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_2830 6d30e168126afbf05e319f963f35cc61 226 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 108 124 7.4E-5 T 11-10-2018 Patl_2830 6d30e168126afbf05e319f963f35cc61 226 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 78 92 7.4E-5 T 11-10-2018 Patl_4048 0138e665b50deff9670f5c86e49593b8 214 SUPERFAMILY SSF51161 59 195 1.08E-25 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Patl_4048 0138e665b50deff9670f5c86e49593b8 214 Gene3D G3DSA:2.160.10.10 28 206 1.8E-26 T 11-10-2018 Patl_3983 efdfb443ef800edceba4b36a42ea0b9e 219 Gene3D G3DSA:3.40.30.10 1 87 4.4E-34 T 11-10-2018 Patl_3983 efdfb443ef800edceba4b36a42ea0b9e 219 Pfam PF00043 Glutathione S-transferase, C-terminal domain 113 192 2.8E-7 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal Patl_3983 efdfb443ef800edceba4b36a42ea0b9e 219 SUPERFAMILY SSF52833 2 81 1.5E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_3983 efdfb443ef800edceba4b36a42ea0b9e 219 SUPERFAMILY SSF47616 74 199 7.24E-35 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Patl_3983 efdfb443ef800edceba4b36a42ea0b9e 219 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 79 5.1E-14 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Patl_3983 efdfb443ef800edceba4b36a42ea0b9e 219 Gene3D G3DSA:1.20.1050.10 88 191 1.6E-44 T 11-10-2018 Patl_2155 db329020ae9a23f1f1024541a4f839fc 154 Pfam PF02391 MoaE protein 8 121 4.8E-32 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Patl_2155 db329020ae9a23f1f1024541a4f839fc 154 SUPERFAMILY SSF54690 4 150 1.7E-46 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Patl_2155 db329020ae9a23f1f1024541a4f839fc 154 Gene3D G3DSA:3.90.1170.40 2 150 1.8E-46 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Patl_2513 1b2ce1ac36bdbe64ef7a19cf73f4ef41 348 Gene3D G3DSA:3.40.50.720 189 345 1.4E-35 T 11-10-2018 Patl_2513 1b2ce1ac36bdbe64ef7a19cf73f4ef41 348 Pfam PF02625 XdhC and CoxI family 16 81 3.6E-20 T 11-10-2018 IPR003777 XdhC- CoxI Patl_2513 1b2ce1ac36bdbe64ef7a19cf73f4ef41 348 Pfam PF13478 XdhC Rossmann domain 190 329 8.9E-28 T 11-10-2018 IPR027051 XdhC Rossmann domain Patl_3857 a005f685ee51f95acf2a19584a7b300d 231 SUPERFAMILY SSF53448 8 226 1.53E-62 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3857 a005f685ee51f95acf2a19584a7b300d 231 Gene3D G3DSA:3.90.550.10 5 230 6.6E-74 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3857 a005f685ee51f95acf2a19584a7b300d 231 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 6 225 41.541 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Patl_3857 a005f685ee51f95acf2a19584a7b300d 231 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 101 108 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Patl_3857 a005f685ee51f95acf2a19584a7b300d 231 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 225 1.9E-74 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Patl_3857 a005f685ee51f95acf2a19584a7b300d 231 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 226 8.5E-79 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Patl_3493 a23cb9fc588c1ef9ced369ee8e309a5b 356 PIRSF PIRSF002849 2 344 1.1E-124 T 11-10-2018 Patl_3493 a23cb9fc588c1ef9ced369ee8e309a5b 356 Gene3D G3DSA:1.10.8.300 228 339 1.1E-32 T 11-10-2018 Patl_3493 a23cb9fc588c1ef9ced369ee8e309a5b 356 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 59 193 7.4E-63 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 Patl_3493 a23cb9fc588c1ef9ced369ee8e309a5b 356 SUPERFAMILY SSF52540 31 315 1.29E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3493 a23cb9fc588c1ef9ced369ee8e309a5b 356 Gene3D G3DSA:3.40.50.300 20 227 2.8E-51 T 11-10-2018 Patl_0242 8520283a5a237e95c888e77e0a3fb34b 323 SUPERFAMILY SSF56655 3 321 3.52E-108 T 11-10-2018 Patl_0242 8520283a5a237e95c888e77e0a3fb34b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 195 222 4.3E-61 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Patl_0242 8520283a5a237e95c888e77e0a3fb34b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 297 322 4.3E-61 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Patl_0242 8520283a5a237e95c888e77e0a3fb34b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 169 192 4.3E-61 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Patl_0242 8520283a5a237e95c888e77e0a3fb34b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 138 161 4.3E-61 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Patl_0242 8520283a5a237e95c888e77e0a3fb34b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 22 49 4.3E-61 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Patl_0242 8520283a5a237e95c888e77e0a3fb34b 323 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 59 85 4.3E-61 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Patl_0242 8520283a5a237e95c888e77e0a3fb34b 323 Gene3D G3DSA:3.40.190.80 186 323 1.4E-52 T 11-10-2018 Patl_0242 8520283a5a237e95c888e77e0a3fb34b 323 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 263 275 - T 11-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Patl_0242 8520283a5a237e95c888e77e0a3fb34b 323 Gene3D G3DSA:3.30.540.10 3 185 7.7E-58 T 11-10-2018 Patl_0242 8520283a5a237e95c888e77e0a3fb34b 323 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 183 3.2E-52 T 11-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Patl_0242 8520283a5a237e95c888e77e0a3fb34b 323 PIRSF PIRSF500210 2 323 3.3E-115 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Patl_0242 8520283a5a237e95c888e77e0a3fb34b 323 PIRSF PIRSF000904 2 323 5.1E-112 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Patl_0242 8520283a5a237e95c888e77e0a3fb34b 323 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 323 44.513 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 Patl_0680 6feca020aaa5916113866aa84faf231f 97 SUPERFAMILY SSF46955 22 72 8.42E-6 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily Patl_0680 6feca020aaa5916113866aa84faf231f 97 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 23 71 1.3E-4 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA Patl_3466 4da57bfb8d07f4e78bae9c40918b5ca2 718 Pfam PF00593 TonB dependent receptor 242 717 1.3E-37 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3466 4da57bfb8d07f4e78bae9c40918b5ca2 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 162 6.9E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3466 4da57bfb8d07f4e78bae9c40918b5ca2 718 Gene3D G3DSA:2.40.170.20 49 718 3.0E-124 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_3466 4da57bfb8d07f4e78bae9c40918b5ca2 718 SUPERFAMILY SSF56935 38 718 4.76E-105 T 11-10-2018 Patl_1116 81d2fcb97eb30a200bdc28813f4d9e25 484 Pfam PF05577 Serine carboxypeptidase S28 110 174 1.1E-4 T 11-10-2018 IPR008758 Peptidase S28 GO:0006508|GO:0008236 Patl_1116 81d2fcb97eb30a200bdc28813f4d9e25 484 SUPERFAMILY SSF53474 98 419 2.01E-15 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3344 bc2e6a581844e96ddee598592eedc5f9 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 37 4.9E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3344 bc2e6a581844e96ddee598592eedc5f9 148 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3344 bc2e6a581844e96ddee598592eedc5f9 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 37 1.8E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3344 bc2e6a581844e96ddee598592eedc5f9 148 SUPERFAMILY SSF54523 17 137 2.98E-21 T 11-10-2018 Patl_3344 bc2e6a581844e96ddee598592eedc5f9 148 Pfam PF00114 Pilin (bacterial filament) 45 139 4.1E-7 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 Patl_3344 bc2e6a581844e96ddee598592eedc5f9 148 Gene3D G3DSA:3.30.700.10 17 145 1.8E-28 T 11-10-2018 Patl_0072 97b92e42c27520abb4c410f0d15be9a4 136 PRINTS PR00607 Class IE cytochrome C signature 79 89 2.7E-17 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Patl_0072 97b92e42c27520abb4c410f0d15be9a4 136 PRINTS PR00607 Class IE cytochrome C signature 68 79 2.7E-17 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Patl_0072 97b92e42c27520abb4c410f0d15be9a4 136 PRINTS PR00607 Class IE cytochrome C signature 122 133 2.7E-17 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Patl_0072 97b92e42c27520abb4c410f0d15be9a4 136 PRINTS PR00607 Class IE cytochrome C signature 107 119 2.7E-17 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 Patl_0072 97b92e42c27520abb4c410f0d15be9a4 136 SUPERFAMILY SSF46626 58 133 2.56E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_0072 97b92e42c27520abb4c410f0d15be9a4 136 Gene3D G3DSA:1.10.760.10 58 135 3.6E-33 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_0072 97b92e42c27520abb4c410f0d15be9a4 136 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 58 132 1.6E-15 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4230 49ff651ca92677251febd27b35efde21 258 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 5 257 39.369 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 Patl_4230 49ff651ca92677251febd27b35efde21 258 Gene3D G3DSA:3.40.50.1820 2 254 4.2E-57 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_4230 49ff651ca92677251febd27b35efde21 258 Pfam PF12697 Alpha/beta hydrolase family 16 247 2.3E-18 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_4230 49ff651ca92677251febd27b35efde21 258 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 13 252 1.3E-79 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 Patl_4230 49ff651ca92677251febd27b35efde21 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 201 215 1.0E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_4230 49ff651ca92677251febd27b35efde21 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 1.0E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_4230 49ff651ca92677251febd27b35efde21 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 1.0E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_4230 49ff651ca92677251febd27b35efde21 258 PRINTS PR00111 Alpha/beta hydrolase fold signature 80 93 1.0E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_4230 49ff651ca92677251febd27b35efde21 258 SUPERFAMILY SSF53474 11 249 2.18E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3962 36757c1ccc50254dae1c63ae18d372bb 442 Pfam PF11737 Protein of unknown function (DUF3300) 40 266 1.1E-87 T 11-10-2018 IPR021728 Protein of unknown function DUF3300 Patl_0287 bdb08f457db25700775a0d8e110feb43 128 Pfam PF14760 Rnk N-terminus 5 44 6.5E-9 T 11-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain Patl_0287 bdb08f457db25700775a0d8e110feb43 128 Gene3D G3DSA:3.10.50.30 46 128 4.5E-20 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Patl_0287 bdb08f457db25700775a0d8e110feb43 128 PIRSF PIRSF006092 10 127 9.1E-24 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Patl_0287 bdb08f457db25700775a0d8e110feb43 128 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 1.4E-18 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Patl_0287 bdb08f457db25700775a0d8e110feb43 128 SUPERFAMILY SSF54534 50 124 4.19E-15 T 11-10-2018 Patl_4161 f0b25b44ac225e1e0932c78ef7cc7fbc 1008 SUPERFAMILY SSF49452 44 129 8.63E-11 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Patl_4161 f0b25b44ac225e1e0932c78ef7cc7fbc 1008 Pfam PF13620 Carboxypeptidase regulatory-like domain 50 129 1.7E-10 T 11-10-2018 Patl_4161 f0b25b44ac225e1e0932c78ef7cc7fbc 1008 Gene3D G3DSA:2.60.40.1120 49 133 3.1E-9 T 11-10-2018 Patl_4161 f0b25b44ac225e1e0932c78ef7cc7fbc 1008 SUPERFAMILY SSF56935 131 1008 1.41E-33 T 11-10-2018 Patl_0217 dd228c9d53a23451a3d19e832f8c57eb 499 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 335 2.7E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_0217 dd228c9d53a23451a3d19e832f8c57eb 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 382 491 1.0E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0217 dd228c9d53a23451a3d19e832f8c57eb 499 Gene3D G3DSA:3.30.565.10 334 495 1.4E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0217 dd228c9d53a23451a3d19e832f8c57eb 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 471 7.0E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0217 dd228c9d53a23451a3d19e832f8c57eb 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 490 7.0E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0217 dd228c9d53a23451a3d19e832f8c57eb 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 432 7.0E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0217 dd228c9d53a23451a3d19e832f8c57eb 499 SUPERFAMILY SSF55874 324 490 6.42E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0217 dd228c9d53a23451a3d19e832f8c57eb 499 SMART SM00387 381 493 5.1E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0217 dd228c9d53a23451a3d19e832f8c57eb 499 SUPERFAMILY SSF47384 252 336 9.02E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_0217 dd228c9d53a23451a3d19e832f8c57eb 499 SMART SM00388 267 335 9.1E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_0217 dd228c9d53a23451a3d19e832f8c57eb 499 Gene3D G3DSA:1.10.287.130 198 330 4.4E-18 T 11-10-2018 Patl_4154 4ed58c40463278c49768f624d0b13810 493 Gene3D G3DSA:1.20.1440.210 49 175 1.7E-23 T 11-10-2018 Patl_4154 4ed58c40463278c49768f624d0b13810 493 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 483 5.6E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_4154 4ed58c40463278c49768f624d0b13810 493 SUPERFAMILY SSF55874 311 483 3.14E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_4154 4ed58c40463278c49768f624d0b13810 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 440 9.2E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_4154 4ed58c40463278c49768f624d0b13810 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 463 9.2E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_4154 4ed58c40463278c49768f624d0b13810 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 426 9.2E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_4154 4ed58c40463278c49768f624d0b13810 493 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 482 9.2E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_4154 4ed58c40463278c49768f624d0b13810 493 Gene3D G3DSA:3.30.565.10 327 490 2.8E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_4154 4ed58c40463278c49768f624d0b13810 493 SMART SM00387 363 485 1.8E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_4154 4ed58c40463278c49768f624d0b13810 493 SUPERFAMILY SSF47384 239 320 3.73E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_4154 4ed58c40463278c49768f624d0b13810 493 Pfam PF00512 His Kinase A (phospho-acceptor) domain 256 321 4.5E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_4154 4ed58c40463278c49768f624d0b13810 493 Pfam PF05227 CHASE3 domain 45 175 1.4E-25 T 11-10-2018 IPR007891 CHASE3 Patl_4154 4ed58c40463278c49768f624d0b13810 493 SMART SM00388 254 322 8.7E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_4154 4ed58c40463278c49768f624d0b13810 493 Gene3D G3DSA:1.10.287.130 218 320 3.6E-16 T 11-10-2018 Patl_1162 59a3c9f3b398250cb0a59b37c23f9f98 306 SUPERFAMILY SSF52768 8 288 1.2E-79 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily Patl_1162 59a3c9f3b398250cb0a59b37c23f9f98 306 Pfam PF00850 Histone deacetylase domain 31 287 8.3E-50 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Patl_1162 59a3c9f3b398250cb0a59b37c23f9f98 306 PRINTS PR01270 Histone deacetylase superfamily signature 157 172 3.2E-14 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Patl_1162 59a3c9f3b398250cb0a59b37c23f9f98 306 PRINTS PR01270 Histone deacetylase superfamily signature 231 241 3.2E-14 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Patl_1162 59a3c9f3b398250cb0a59b37c23f9f98 306 PRINTS PR01270 Histone deacetylase superfamily signature 123 146 3.2E-14 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Patl_1162 59a3c9f3b398250cb0a59b37c23f9f98 306 Gene3D G3DSA:3.40.800.20 8 299 3.8E-61 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Patl_1514 771594ca1521aef4a1d6697b77572349 127 Gene3D G3DSA:3.10.450.50 1 125 5.8E-21 T 11-10-2018 Patl_1514 771594ca1521aef4a1d6697b77572349 127 SUPERFAMILY SSF54427 1 124 6.31E-18 T 11-10-2018 IPR032710 NTF2-like domain superfamily Patl_1514 771594ca1521aef4a1d6697b77572349 127 Pfam PF14534 Domain of unknown function (DUF4440) 7 118 1.7E-8 T 11-10-2018 IPR027843 Domain of unknown function DUF4440 Patl_0380 ab45d5d566a20f02165b5515d0075f24 71 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Patl_0380 ab45d5d566a20f02165b5515d0075f24 71 Pfam PF14697 4Fe-4S dicluster domain 8 57 2.7E-10 T 11-10-2018 Patl_0380 ab45d5d566a20f02165b5515d0075f24 71 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 41 52 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Patl_0380 ab45d5d566a20f02165b5515d0075f24 71 SUPERFAMILY SSF54862 9 61 6.99E-17 T 11-10-2018 Patl_0380 ab45d5d566a20f02165b5515d0075f24 71 Gene3D G3DSA:3.30.70.20 2 66 2.1E-14 T 11-10-2018 Patl_3581 186a92d438baa71c7b4fb1875f96a414 461 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 15 386 1.2E-131 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Patl_3581 186a92d438baa71c7b4fb1875f96a414 461 Gene3D G3DSA:2.160.10.10 296 417 9.2E-29 T 11-10-2018 Patl_3581 186a92d438baa71c7b4fb1875f96a414 461 Pfam PF00483 Nucleotidyl transferase 17 281 8.9E-54 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Patl_3581 186a92d438baa71c7b4fb1875f96a414 461 SUPERFAMILY SSF51161 320 405 5.98E-15 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Patl_3581 186a92d438baa71c7b4fb1875f96a414 461 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 205 215 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 Patl_3581 186a92d438baa71c7b4fb1875f96a414 461 SUPERFAMILY SSF53448 10 366 4.22E-66 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3581 186a92d438baa71c7b4fb1875f96a414 461 Gene3D G3DSA:3.90.550.10 3 295 1.8E-76 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3161 5400d550f57218dae0122f127973d442 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 7.9E-15 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Patl_3161 5400d550f57218dae0122f127973d442 161 Gene3D G3DSA:2.40.10.330 71 120 4.7E-54 T 11-10-2018 Patl_3161 5400d550f57218dae0122f127973d442 161 SUPERFAMILY SSF54534 3 139 9.23E-39 T 11-10-2018 Patl_3161 5400d550f57218dae0122f127973d442 161 Gene3D G3DSA:3.10.50.40 3 152 4.7E-54 T 11-10-2018 Patl_4157 20a463272f09ef58fb28c3f19db0ca5e 396 Pfam PF13673 Acetyltransferase (GNAT) domain 50 176 1.2E-11 T 11-10-2018 IPR000182 GNAT domain Patl_4157 20a463272f09ef58fb28c3f19db0ca5e 396 Gene3D G3DSA:3.40.630.30 25 185 6.6E-29 T 11-10-2018 Patl_4157 20a463272f09ef58fb28c3f19db0ca5e 396 Pfam PF11814 Peptidase_C39 like family 190 393 5.9E-89 T 11-10-2018 IPR021770 Protein of unknown function DUF3335 Patl_4157 20a463272f09ef58fb28c3f19db0ca5e 396 SUPERFAMILY SSF55729 31 178 2.84E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_4026 623f7ae9f71dd9734a9ac904da496b04 323 Pfam PF08003 Protein of unknown function (DUF1698) 9 322 1.8E-150 T 11-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like Patl_4026 623f7ae9f71dd9734a9ac904da496b04 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 14 323 54.796 T 11-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 Patl_4026 623f7ae9f71dd9734a9ac904da496b04 323 Gene3D G3DSA:3.40.50.150 69 300 4.7E-26 T 11-10-2018 Patl_4026 623f7ae9f71dd9734a9ac904da496b04 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 9 322 6.2E-151 T 11-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 Patl_4026 623f7ae9f71dd9734a9ac904da496b04 323 SUPERFAMILY SSF53335 90 316 7.67E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_0630 630f0d0caf9941aec4c53d2242f8e895 284 Pfam PF01758 Sodium Bile acid symporter family 12 195 6.7E-35 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Patl_0630 630f0d0caf9941aec4c53d2242f8e895 284 Gene3D G3DSA:1.20.1530.20 2 284 8.5E-74 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Patl_0348 2580d4599777ef7beaffa5653074f20d 90 SUPERFAMILY SSF63562 1 73 7.85E-23 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Patl_0348 2580d4599777ef7beaffa5653074f20d 90 Pfam PF01192 RNA polymerase Rpb6 10 59 2.4E-15 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Patl_0348 2580d4599777ef7beaffa5653074f20d 90 Gene3D G3DSA:3.90.940.10 1 90 3.1E-23 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Patl_0348 2580d4599777ef7beaffa5653074f20d 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 3.2E-23 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0348 2580d4599777ef7beaffa5653074f20d 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 15.79 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Patl_0348 2580d4599777ef7beaffa5653074f20d 90 SMART SM01409 8 61 9.0E-16 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Patl_0831 d0ca833fd237f5f801825db36fd7751a 537 Gene3D G3DSA:2.60.40.1180 424 537 2.2E-32 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_0831 d0ca833fd237f5f801825db36fd7751a 537 SMART SM00812 66 487 2.1E-210 T 11-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_0831 d0ca833fd237f5f801825db36fd7751a 537 Pfam PF01120 Alpha-L-fucosidase 61 420 4.7E-100 T 11-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_0831 d0ca833fd237f5f801825db36fd7751a 537 Gene3D G3DSA:3.20.20.80 61 423 1.0E-124 T 11-10-2018 Patl_0831 d0ca833fd237f5f801825db36fd7751a 537 PRINTS PR00741 Glycosyl hydrolase family 29 signature 162 178 1.0E-8 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_0831 d0ca833fd237f5f801825db36fd7751a 537 PRINTS PR00741 Glycosyl hydrolase family 29 signature 406 428 1.0E-8 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_0831 d0ca833fd237f5f801825db36fd7751a 537 PIRSF PIRSF001092 39 535 7.6E-90 T 11-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_0831 d0ca833fd237f5f801825db36fd7751a 537 SUPERFAMILY SSF51445 66 423 2.11E-100 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_0831 d0ca833fd237f5f801825db36fd7751a 537 Pfam PF16757 Alpha-L-fucosidase C-terminal domain 452 536 5.4E-13 T 11-10-2018 IPR031919 Alpha-L-fucosidase, C-terminal KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 Patl_3704 8b378e44c5bf72e7c7d58917e00f3f47 195 SUPERFAMILY SSF54631 39 164 2.05E-15 T 11-10-2018 Patl_3704 8b378e44c5bf72e7c7d58917e00f3f47 195 SMART SM00116 115 166 0.27 T 11-10-2018 IPR000644 CBS domain Patl_3704 8b378e44c5bf72e7c7d58917e00f3f47 195 SMART SM00116 41 89 0.046 T 11-10-2018 IPR000644 CBS domain Patl_3704 8b378e44c5bf72e7c7d58917e00f3f47 195 Gene3D G3DSA:3.10.580.10 29 170 1.4E-16 T 11-10-2018 Patl_3704 8b378e44c5bf72e7c7d58917e00f3f47 195 Pfam PF00571 CBS domain 39 84 2.7E-6 T 11-10-2018 IPR000644 CBS domain Patl_3704 8b378e44c5bf72e7c7d58917e00f3f47 195 Pfam PF00571 CBS domain 125 163 8.7E-5 T 11-10-2018 IPR000644 CBS domain Patl_2468 7ae947dbac08d3b22b0d29e4e011617e 429 ProSitePatterns PS00885 EPSP synthase signature 2. 342 360 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Patl_2468 7ae947dbac08d3b22b0d29e4e011617e 429 Gene3D G3DSA:3.65.10.10 245 421 3.3E-151 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Patl_2468 7ae947dbac08d3b22b0d29e4e011617e 429 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 13 429 34.232 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Patl_2468 7ae947dbac08d3b22b0d29e4e011617e 429 ProSitePatterns PS00104 EPSP synthase signature 1. 93 107 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Patl_2468 7ae947dbac08d3b22b0d29e4e011617e 429 SUPERFAMILY SSF55205 8 427 4.49E-140 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Patl_2468 7ae947dbac08d3b22b0d29e4e011617e 429 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 424 2.3E-151 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Patl_2468 7ae947dbac08d3b22b0d29e4e011617e 429 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 17 428 6.6E-142 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Patl_2468 7ae947dbac08d3b22b0d29e4e011617e 429 Gene3D G3DSA:3.65.10.10 23 227 3.3E-151 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Patl_2468 7ae947dbac08d3b22b0d29e4e011617e 429 PIRSF PIRSF000505 7 429 2.0E-153 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Patl_1136 32d51bfb93b65d150a10a1ae73655a1c 235 SMART SM00855 33 182 1.9E-8 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Patl_1136 32d51bfb93b65d150a10a1ae73655a1c 235 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 36 223 1.3E-39 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Patl_1136 32d51bfb93b65d150a10a1ae73655a1c 235 Gene3D G3DSA:3.40.50.1240 30 234 1.4E-50 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Patl_1136 32d51bfb93b65d150a10a1ae73655a1c 235 SUPERFAMILY SSF53254 32 219 4.28E-39 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Patl_3623 79b8633ffffbcce931ef7af64654a815 547 Pfam PF00342 Phosphoglucose isomerase 49 539 6.8E-208 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3623 79b8633ffffbcce931ef7af64654a815 547 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 522 39.68 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3623 79b8633ffffbcce931ef7af64654a815 547 Gene3D G3DSA:3.40.50.10490 10 504 1.0E-214 T 11-10-2018 Patl_3623 79b8633ffffbcce931ef7af64654a815 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 1.9E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3623 79b8633ffffbcce931ef7af64654a815 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 1.9E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3623 79b8633ffffbcce931ef7af64654a815 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 495 1.9E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3623 79b8633ffffbcce931ef7af64654a815 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 463 481 1.9E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3623 79b8633ffffbcce931ef7af64654a815 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 1.9E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3623 79b8633ffffbcce931ef7af64654a815 547 PRINTS PR00662 Glucose-6-phosphate isomerase signature 495 508 1.9E-52 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3623 79b8633ffffbcce931ef7af64654a815 547 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 495 512 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3623 79b8633ffffbcce931ef7af64654a815 547 Gene3D G3DSA:3.40.50.10490 95 289 1.0E-214 T 11-10-2018 Patl_3623 79b8633ffffbcce931ef7af64654a815 547 SUPERFAMILY SSF53697 4 546 5.19E-204 T 11-10-2018 Patl_3623 79b8633ffffbcce931ef7af64654a815 547 Gene3D G3DSA:1.10.1390.10 505 546 3.4E-16 T 11-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3623 79b8633ffffbcce931ef7af64654a815 547 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3059 f67a5db6f9152e0f4fa4612f5bf382ce 370 SUPERFAMILY SSF53383 7 365 6.19E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_3059 f67a5db6f9152e0f4fa4612f5bf382ce 370 Gene3D G3DSA:3.40.640.10 1 245 1.5E-90 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_3059 f67a5db6f9152e0f4fa4612f5bf382ce 370 PIRSF PIRSF000390 1 369 4.2E-111 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Patl_3059 f67a5db6f9152e0f4fa4612f5bf382ce 370 Gene3D G3DSA:3.90.1150.10 247 366 2.6E-18 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_3059 f67a5db6f9152e0f4fa4612f5bf382ce 370 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 11 362 4.2E-108 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Patl_1363 dd3f62466a795a97c37d8a1803322017 238 Pfam PF00849 RNA pseudouridylate synthase 17 160 1.7E-23 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1363 dd3f62466a795a97c37d8a1803322017 238 SUPERFAMILY SSF55120 9 198 2.4E-45 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1363 dd3f62466a795a97c37d8a1803322017 238 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 54 68 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1363 dd3f62466a795a97c37d8a1803322017 238 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 9 222 1.9E-78 T 11-10-2018 IPR006508 Pseudouridine synthase, RluA-like Patl_1363 dd3f62466a795a97c37d8a1803322017 238 Gene3D G3DSA:3.30.2350.10 2 201 1.3E-46 T 11-10-2018 Patl_0275 9bec9c312370acc3081a36075151d239 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 97 197 7.1E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_0275 9bec9c312370acc3081a36075151d239 227 Gene3D G3DSA:3.40.50.1000 11 222 5.7E-71 T 11-10-2018 IPR023214 HAD superfamily Patl_0275 9bec9c312370acc3081a36075151d239 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 111 124 3.9E-15 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_0275 9bec9c312370acc3081a36075151d239 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 3.9E-15 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_0275 9bec9c312370acc3081a36075151d239 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 187 200 3.9E-15 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_0275 9bec9c312370acc3081a36075151d239 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 8 19 3.9E-15 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_0275 9bec9c312370acc3081a36075151d239 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 160 180 3.9E-15 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_0275 9bec9c312370acc3081a36075151d239 227 SUPERFAMILY SSF56784 6 222 8.97E-52 T 11-10-2018 IPR036412 HAD-like superfamily Patl_0275 9bec9c312370acc3081a36075151d239 227 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 11 190 2.8E-17 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_0275 9bec9c312370acc3081a36075151d239 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 198 9.0E-19 T 11-10-2018 Patl_0275 9bec9c312370acc3081a36075151d239 227 Gene3D G3DSA:1.10.150.240 22 96 5.7E-71 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Patl_0275 9bec9c312370acc3081a36075151d239 227 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 9 203 3.0E-56 T 11-10-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 Patl_2065 0e2537382e8893750de6bd58d44d859c 311 SUPERFAMILY SSF52402 4 157 1.09E-23 T 11-10-2018 Patl_2065 0e2537382e8893750de6bd58d44d859c 311 SUPERFAMILY SSF52402 156 308 1.26E-25 T 11-10-2018 Patl_2065 0e2537382e8893750de6bd58d44d859c 311 Gene3D G3DSA:3.40.50.12370 1 311 6.1E-111 T 11-10-2018 Patl_2065 0e2537382e8893750de6bd58d44d859c 311 Pfam PF00582 Universal stress protein family 4 147 3.9E-13 T 11-10-2018 IPR006016 UspA Patl_2065 0e2537382e8893750de6bd58d44d859c 311 Pfam PF00582 Universal stress protein family 178 300 1.7E-15 T 11-10-2018 IPR006016 UspA Patl_1266 b6c77f29d31974e90387376a00878832 464 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 23 214 2.4E-48 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Patl_1266 b6c77f29d31974e90387376a00878832 464 Pfam PF09179 TilS substrate binding domain 259 326 1.0E-14 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Patl_1266 b6c77f29d31974e90387376a00878832 464 Pfam PF01171 PP-loop family 24 210 1.9E-48 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Patl_1266 b6c77f29d31974e90387376a00878832 464 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 391 426 2.2E-7 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Patl_1266 b6c77f29d31974e90387376a00878832 464 SUPERFAMILY SSF56037 334 442 6.54E-14 T 11-10-2018 Patl_1266 b6c77f29d31974e90387376a00878832 464 SUPERFAMILY SSF82829 246 328 2.22E-20 T 11-10-2018 Patl_1266 b6c77f29d31974e90387376a00878832 464 Gene3D G3DSA:1.20.59.20 245 329 7.2E-22 T 11-10-2018 Patl_1266 b6c77f29d31974e90387376a00878832 464 SUPERFAMILY SSF52402 23 243 1.75E-51 T 11-10-2018 Patl_1266 b6c77f29d31974e90387376a00878832 464 Gene3D G3DSA:3.40.50.620 15 244 9.0E-61 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_1266 b6c77f29d31974e90387376a00878832 464 SMART SM00977 381 446 1.4E-8 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Patl_1266 b6c77f29d31974e90387376a00878832 464 Pfam PF11734 TilS substrate C-terminal domain 381 430 1.8E-11 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Patl_1266 b6c77f29d31974e90387376a00878832 464 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 318 21.7 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Patl_0743 c0e1cc93ba21563f47aadb4e992c457d 216 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 161 213 5.9E-13 T 11-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type Patl_0743 c0e1cc93ba21563f47aadb4e992c457d 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 2.3E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_0743 c0e1cc93ba21563f47aadb4e992c457d 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 2.3E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_0743 c0e1cc93ba21563f47aadb4e992c457d 216 Gene3D G3DSA:1.10.357.10 81 216 1.7E-32 T 11-10-2018 Patl_0743 c0e1cc93ba21563f47aadb4e992c457d 216 SUPERFAMILY SSF48498 95 215 8.45E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Patl_0743 c0e1cc93ba21563f47aadb4e992c457d 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 73 2.9E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_0743 c0e1cc93ba21563f47aadb4e992c457d 216 SUPERFAMILY SSF46689 16 97 4.82E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0743 c0e1cc93ba21563f47aadb4e992c457d 216 Gene3D G3DSA:1.10.10.60 8 73 7.5E-19 T 11-10-2018 Patl_0803 6b01b697c10281b3019d75569aac1545 506 SUPERFAMILY SSF51905 8 408 1.05E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0803 6b01b697c10281b3019d75569aac1545 506 Pfam PF04820 Tryptophan halogenase 9 469 3.2E-132 T 11-10-2018 IPR006905 Flavin-dependent halogenase Patl_0803 6b01b697c10281b3019d75569aac1545 506 PIRSF PIRSF011396 2 505 3.9E-152 T 11-10-2018 IPR033856 Flavin-dependent tryptophan halogenase Patl_0803 6b01b697c10281b3019d75569aac1545 506 Gene3D G3DSA:3.50.50.60 4 504 4.6E-164 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1439 31c9647cdae3429b39d889920f98687b 285 Pfam PF00756 Putative esterase 28 276 1.1E-64 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Patl_1439 31c9647cdae3429b39d889920f98687b 285 Gene3D G3DSA:3.40.50.1820 9 285 2.6E-95 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1439 31c9647cdae3429b39d889920f98687b 285 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 11 282 2.3E-124 T 11-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 Patl_1439 31c9647cdae3429b39d889920f98687b 285 SUPERFAMILY SSF53474 8 283 1.06E-92 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2503 013899cb4ad364b064aafa70ecd8f0b9 251 SUPERFAMILY SSF53098 51 237 5.06E-44 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_2503 013899cb4ad364b064aafa70ecd8f0b9 251 Gene3D G3DSA:3.30.420.10 54 239 8.4E-41 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Patl_2503 013899cb4ad364b064aafa70ecd8f0b9 251 Pfam PF00929 Exonuclease 61 231 4.4E-21 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Patl_2503 013899cb4ad364b064aafa70ecd8f0b9 251 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 60 238 6.3E-21 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_2503 013899cb4ad364b064aafa70ecd8f0b9 251 SMART SM00479 59 240 5.4E-25 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Patl_3148 0a6d27706d81d69c7450f58cdbf70449 300 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 169 9.6E-34 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Patl_3148 0a6d27706d81d69c7450f58cdbf70449 300 Hamap MF_00367 GTPase Era [era]. 5 296 36.049 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3148 0a6d27706d81d69c7450f58cdbf70449 300 Pfam PF01926 50S ribosome-binding GTPase 10 124 2.1E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_3148 0a6d27706d81d69c7450f58cdbf70449 300 SUPERFAMILY SSF54814 181 297 6.21E-44 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Patl_3148 0a6d27706d81d69c7450f58cdbf70449 300 Gene3D G3DSA:3.30.300.20 185 300 1.3E-43 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Patl_3148 0a6d27706d81d69c7450f58cdbf70449 300 TIGRFAM TIGR00436 era: GTP-binding protein Era 8 279 2.7E-106 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3148 0a6d27706d81d69c7450f58cdbf70449 300 SUPERFAMILY SSF52540 10 205 2.5E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3148 0a6d27706d81d69c7450f58cdbf70449 300 Pfam PF07650 KH domain 208 284 4.5E-22 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_3148 0a6d27706d81d69c7450f58cdbf70449 300 Gene3D G3DSA:3.40.50.300 3 183 3.2E-49 T 11-10-2018 Patl_2181 f2a705cbc324da998ad28b807ccb2a21 344 Gene3D G3DSA:3.40.1750.20 197 261 1.4E-41 T 11-10-2018 Patl_2181 f2a705cbc324da998ad28b807ccb2a21 344 Pfam PF01343 Peptidase family S49 156 303 4.0E-44 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Patl_2181 f2a705cbc324da998ad28b807ccb2a21 344 Gene3D G3DSA:3.90.226.10 130 296 1.4E-41 T 11-10-2018 Patl_2181 f2a705cbc324da998ad28b807ccb2a21 344 Pfam PF08496 Peptidase family S49 N-terminal 2 153 1.9E-57 T 11-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 Patl_2181 f2a705cbc324da998ad28b807ccb2a21 344 SUPERFAMILY SSF52096 96 294 3.04E-30 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_0452 ce0c5f5618c7e3fe5ba2b27b147beaed 457 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 13 457 2.9E-185 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 Patl_0452 ce0c5f5618c7e3fe5ba2b27b147beaed 457 Pfam PF11973 NQRA C-terminal domain 272 321 6.7E-20 T 11-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 Patl_0452 ce0c5f5618c7e3fe5ba2b27b147beaed 457 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 12 267 2.7E-113 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 Patl_0452 ce0c5f5618c7e3fe5ba2b27b147beaed 457 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 12 457 45.701 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 Patl_0027 124032d928a744536a7ad7028cc2abe7 186 Gene3D G3DSA:3.30.65.10 14 60 2.1E-6 T 11-10-2018 Patl_0027 124032d928a744536a7ad7028cc2abe7 186 Gene3D G3DSA:3.30.65.10 61 110 1.5E-10 T 11-10-2018 Patl_0027 124032d928a744536a7ad7028cc2abe7 186 SUPERFAMILY SSF57783 64 106 7.48E-13 T 11-10-2018 Patl_0027 124032d928a744536a7ad7028cc2abe7 186 SUPERFAMILY SSF57783 18 58 1.33E-11 T 11-10-2018 Patl_0027 124032d928a744536a7ad7028cc2abe7 186 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 68 102 6.0E-16 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Patl_0027 124032d928a744536a7ad7028cc2abe7 186 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 109 145 2.4E-9 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Patl_0027 124032d928a744536a7ad7028cc2abe7 186 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 55 2.7E-14 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Patl_2625 10b6b124049c3f0b97f40323c03b1987 244 Gene3D G3DSA:3.90.79.10 21 229 1.6E-43 T 11-10-2018 Patl_2625 10b6b124049c3f0b97f40323c03b1987 244 SUPERFAMILY SSF55811 20 218 2.31E-19 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Patl_2625 10b6b124049c3f0b97f40323c03b1987 244 Pfam PF00293 NUDIX domain 29 202 3.7E-7 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Patl_2040 f9b0f83497d86ef5196db379dd711b87 616 Gene3D G3DSA:1.10.510.10 125 315 6.1E-19 T 11-10-2018 Patl_2040 f9b0f83497d86ef5196db379dd711b87 616 SMART SM00220 45 313 4.6E-10 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Patl_2040 f9b0f83497d86ef5196db379dd711b87 616 Gene3D G3DSA:3.30.200.20 30 122 9.5E-6 T 11-10-2018 Patl_2040 f9b0f83497d86ef5196db379dd711b87 616 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 170 182 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Patl_2040 f9b0f83497d86ef5196db379dd711b87 616 Pfam PF00069 Protein kinase domain 45 265 1.6E-20 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Patl_2040 f9b0f83497d86ef5196db379dd711b87 616 SUPERFAMILY SSF56112 44 311 1.35E-34 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Patl_2040 f9b0f83497d86ef5196db379dd711b87 616 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 51 75 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Patl_3939 ca4abd425c328a01b9da7c43cf0941a2 427 SUPERFAMILY SSF53187 101 425 1.13E-91 T 11-10-2018 Patl_3939 ca4abd425c328a01b9da7c43cf0941a2 427 PIRSF PIRSF036388 1 427 6.0E-178 T 11-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 Patl_3939 ca4abd425c328a01b9da7c43cf0941a2 427 Gene3D G3DSA:3.40.630.10 92 427 5.6E-98 T 11-10-2018 Patl_3939 ca4abd425c328a01b9da7c43cf0941a2 427 PRINTS PR00481 Cytosol aminopeptidase signature 268 288 1.5E-44 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Patl_3939 ca4abd425c328a01b9da7c43cf0941a2 427 PRINTS PR00481 Cytosol aminopeptidase signature 246 267 1.5E-44 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Patl_3939 ca4abd425c328a01b9da7c43cf0941a2 427 PRINTS PR00481 Cytosol aminopeptidase signature 209 230 1.5E-44 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Patl_3939 ca4abd425c328a01b9da7c43cf0941a2 427 PRINTS PR00481 Cytosol aminopeptidase signature 187 204 1.5E-44 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Patl_3939 ca4abd425c328a01b9da7c43cf0941a2 427 PRINTS PR00481 Cytosol aminopeptidase signature 296 311 1.5E-44 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Patl_3939 ca4abd425c328a01b9da7c43cf0941a2 427 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 106 420 1.5E-93 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Patl_3939 ca4abd425c328a01b9da7c43cf0941a2 427 Pfam PF12404 Peptidase 4 79 2.7E-25 T 11-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 Patl_3939 ca4abd425c328a01b9da7c43cf0941a2 427 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 272 279 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Patl_0148 46a8e258112f6a84209e96e5b8344fca 200 SUPERFAMILY SSF50249 5 200 7.2E-56 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_0148 46a8e258112f6a84209e96e5b8344fca 200 PIRSF PIRSF002070 144 198 92.0 T 11-10-2018 Patl_0148 46a8e258112f6a84209e96e5b8344fca 200 PIRSF PIRSF002070 2 146 1.6E-39 T 11-10-2018 Patl_0148 46a8e258112f6a84209e96e5b8344fca 200 Hamap MF_00984 Single-stranded DNA-binding protein. 6 113 39.114 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Patl_0148 46a8e258112f6a84209e96e5b8344fca 200 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 200 1.1E-57 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Patl_0148 46a8e258112f6a84209e96e5b8344fca 200 Pfam PF00436 Single-strand binding protein family 6 109 1.7E-44 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Patl_0148 46a8e258112f6a84209e96e5b8344fca 200 Gene3D G3DSA:2.40.50.140 2 127 2.1E-49 T 11-10-2018 Patl_2717 10e356c682d92b45cbadf74f7e75cd3b 275 Gene3D G3DSA:3.20.20.60 1 275 1.3E-85 T 11-10-2018 Patl_2717 10e356c682d92b45cbadf74f7e75cd3b 275 SUPERFAMILY SSF51621 4 224 1.61E-60 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Patl_2717 10e356c682d92b45cbadf74f7e75cd3b 275 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 212 2.1E-39 T 11-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 Patl_2717 10e356c682d92b45cbadf74f7e75cd3b 275 PIRSF PIRSF015582 1 275 3.4E-71 T 11-10-2018 IPR011206 Citrate lyase beta subunit-like Patl_3150 6cd994efe47bce68dce6eb175fb4dd75 301 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 234 253 4.3E-26 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Patl_3150 6cd994efe47bce68dce6eb175fb4dd75 301 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 140 152 4.3E-26 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Patl_3150 6cd994efe47bce68dce6eb175fb4dd75 301 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 76 92 4.3E-26 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Patl_3150 6cd994efe47bce68dce6eb175fb4dd75 301 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 63 274 7.3E-45 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Patl_3150 6cd994efe47bce68dce6eb175fb4dd75 301 Pfam PF00717 Peptidase S24-like 82 161 9.7E-21 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Patl_3150 6cd994efe47bce68dce6eb175fb4dd75 301 ProSitePatterns PS00761 Signal peptidases I signature 3. 239 252 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Patl_3150 6cd994efe47bce68dce6eb175fb4dd75 301 Gene3D G3DSA:2.170.230.10 151 233 4.1E-76 T 11-10-2018 Patl_3150 6cd994efe47bce68dce6eb175fb4dd75 301 SUPERFAMILY SSF51306 74 300 9.42E-70 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Patl_3150 6cd994efe47bce68dce6eb175fb4dd75 301 ProSitePatterns PS00501 Signal peptidases I serine active site. 85 92 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 Patl_3150 6cd994efe47bce68dce6eb175fb4dd75 301 Pfam PF10502 Signal peptidase, peptidase S26 231 271 2.0E-6 T 11-10-2018 IPR019533 Peptidase S26 Patl_3150 6cd994efe47bce68dce6eb175fb4dd75 301 ProSitePatterns PS00760 Signal peptidases I lysine active site. 142 154 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 Patl_3150 6cd994efe47bce68dce6eb175fb4dd75 301 Gene3D G3DSA:2.10.109.10 74 274 4.1E-76 T 11-10-2018 Patl_3224 a8c4a27eaf79c1d2d7930ff930a78c29 295 Pfam PF00685 Sulfotransferase domain 24 227 6.9E-8 T 11-10-2018 IPR000863 Sulfotransferase domain GO:0008146 Patl_3224 a8c4a27eaf79c1d2d7930ff930a78c29 295 SUPERFAMILY SSF52540 7 234 8.58E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4070 5725a6b514d1d5a06d662bb6d44a584e 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 9.2E-59 T 11-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 Patl_4070 5725a6b514d1d5a06d662bb6d44a584e 161 Gene3D G3DSA:3.50.30.40 1 161 4.9E-55 T 11-10-2018 Patl_4070 5725a6b514d1d5a06d662bb6d44a584e 161 SUPERFAMILY SSF89562 2 159 1.06E-42 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Patl_4070 5725a6b514d1d5a06d662bb6d44a584e 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 45.444 T 11-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 Patl_4070 5725a6b514d1d5a06d662bb6d44a584e 161 Pfam PF03737 Aldolase/RraA 7 152 3.9E-34 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Patl_4070 5725a6b514d1d5a06d662bb6d44a584e 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 4.0E-79 T 11-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 Patl_3292 2402ea8ddc9f719cca777c55f7043675 571 Pfam PF07603 Protein of unknown function (DUF1566) 413 568 9.3E-29 T 11-10-2018 IPR011460 Protein of unknown function DUF1566 Patl_3292 2402ea8ddc9f719cca777c55f7043675 571 Gene3D G3DSA:2.60.40.3010 155 239 1.5E-12 T 11-10-2018 Patl_3292 2402ea8ddc9f719cca777c55f7043675 571 Gene3D G3DSA:2.60.40.10 242 339 9.1E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_3292 2402ea8ddc9f719cca777c55f7043675 571 Gene3D G3DSA:2.60.40.10 41 138 5.8E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0666 1b1143e1dcc6c43972555fb459ecabbc 171 PRINTS PR01100 Shikimate kinase family signature 7 22 9.5E-28 T 11-10-2018 Patl_0666 1b1143e1dcc6c43972555fb459ecabbc 171 PRINTS PR01100 Shikimate kinase family signature 31 44 9.5E-28 T 11-10-2018 Patl_0666 1b1143e1dcc6c43972555fb459ecabbc 171 PRINTS PR01100 Shikimate kinase family signature 77 86 9.5E-28 T 11-10-2018 Patl_0666 1b1143e1dcc6c43972555fb459ecabbc 171 PRINTS PR01100 Shikimate kinase family signature 59 67 9.5E-28 T 11-10-2018 Patl_0666 1b1143e1dcc6c43972555fb459ecabbc 171 PRINTS PR01100 Shikimate kinase family signature 98 115 9.5E-28 T 11-10-2018 Patl_0666 1b1143e1dcc6c43972555fb459ecabbc 171 Gene3D G3DSA:3.40.50.300 2 171 2.9E-57 T 11-10-2018 Patl_0666 1b1143e1dcc6c43972555fb459ecabbc 171 SUPERFAMILY SSF52540 4 169 6.21E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0666 1b1143e1dcc6c43972555fb459ecabbc 171 Pfam PF01202 Shikimate kinase 13 169 1.8E-56 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Patl_0666 1b1143e1dcc6c43972555fb459ecabbc 171 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Patl_0666 1b1143e1dcc6c43972555fb459ecabbc 171 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 28.999 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Patl_2459 c905edcc41381eb52f3caaf45ed89123 213 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 17 212 4.1E-39 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 Patl_2459 c905edcc41381eb52f3caaf45ed89123 213 Gene3D G3DSA:2.50.20.10 32 212 8.2E-44 T 11-10-2018 Patl_2459 c905edcc41381eb52f3caaf45ed89123 213 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 43 201 1.4E-39 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like Patl_2459 c905edcc41381eb52f3caaf45ed89123 213 SUPERFAMILY SSF89392 35 212 5.1E-46 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Patl_2459 c905edcc41381eb52f3caaf45ed89123 213 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 18 211 26.376 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 Patl_0496 39213368caad72e2bc0a46d35a974653 334 Gene3D G3DSA:3.40.50.1370 135 302 1.0E-102 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Patl_0496 39213368caad72e2bc0a46d35a974653 334 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 7 314 1.1E-92 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Patl_0496 39213368caad72e2bc0a46d35a974653 334 SUPERFAMILY SSF53671 2 316 5.86E-87 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Patl_0496 39213368caad72e2bc0a46d35a974653 334 Gene3D G3DSA:3.40.50.1370 7 311 1.0E-102 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Patl_0496 39213368caad72e2bc0a46d35a974653 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 158 313 7.0E-23 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Patl_0496 39213368caad72e2bc0a46d35a974653 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 296 310 2.1E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Patl_0496 39213368caad72e2bc0a46d35a974653 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 2.1E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Patl_0496 39213368caad72e2bc0a46d35a974653 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 229 238 2.1E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Patl_0496 39213368caad72e2bc0a46d35a974653 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 80 89 2.1E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Patl_0496 39213368caad72e2bc0a46d35a974653 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 41 63 2.1E-29 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Patl_0496 39213368caad72e2bc0a46d35a974653 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 51 58 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Patl_0496 39213368caad72e2bc0a46d35a974653 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 280 303 5.7E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Patl_0496 39213368caad72e2bc0a46d35a974653 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 51 70 5.7E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Patl_0496 39213368caad72e2bc0a46d35a974653 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 5.7E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Patl_0496 39213368caad72e2bc0a46d35a974653 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 274 5.7E-20 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Patl_0496 39213368caad72e2bc0a46d35a974653 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 1.1E-46 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Patl_1644 253b537a786466d4e9dd9b41b5173f00 93 Pfam PF07023 Protein of unknown function (DUF1315) 5 83 2.3E-28 T 11-10-2018 IPR009749 Protein of unknown function DUF1315 Patl_3974 e21d9a359e6f01d79edddde1ec5cf28f 153 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 7 138 2.9E-47 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Patl_3974 e21d9a359e6f01d79edddde1ec5cf28f 153 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 8 129 4.9E-40 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Patl_3974 e21d9a359e6f01d79edddde1ec5cf28f 153 Gene3D G3DSA:3.40.50.300 1 152 1.2E-47 T 11-10-2018 Patl_3974 e21d9a359e6f01d79edddde1ec5cf28f 153 SUPERFAMILY SSF52540 28 137 4.94E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3734 47c815ddb12f282ed2e6ce9f9cb3e315 164 SUPERFAMILY SSF52833 1 162 2.53E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_3734 47c815ddb12f282ed2e6ce9f9cb3e315 164 Gene3D G3DSA:3.40.30.10 1 164 2.7E-45 T 11-10-2018 Patl_3734 47c815ddb12f282ed2e6ce9f9cb3e315 164 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 11-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 Patl_3734 47c815ddb12f282ed2e6ce9f9cb3e315 164 Hamap MF_00269 Thiol peroxidase [tpx]. 3 164 35.625 T 11-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 Patl_3734 47c815ddb12f282ed2e6ce9f9cb3e315 164 Pfam PF08534 Redoxin 20 161 1.3E-25 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Patl_2349 900aa7d7e392d520eca327cbc255feac 161 SUPERFAMILY SSF49785 8 157 1.79E-21 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_2349 900aa7d7e392d520eca327cbc255feac 161 Pfam PF08547 Complex I intermediate-associated protein 30 (CIA30) 8 153 1.5E-41 T 11-10-2018 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 Reactome: R-HSA-6799198 Patl_1467 5543c1d7ed24a5118322414811cf4cfa 484 SUPERFAMILY SSF56024 69 315 2.06E-42 T 11-10-2018 Patl_1467 5543c1d7ed24a5118322414811cf4cfa 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 26 66 6.2E-8 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal Patl_1467 5543c1d7ed24a5118322414811cf4cfa 484 Gene3D G3DSA:3.30.870.10 113 312 1.2E-37 T 11-10-2018 Patl_1467 5543c1d7ed24a5118322414811cf4cfa 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 15 484 6.4E-90 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 Patl_1467 5543c1d7ed24a5118322414811cf4cfa 484 SUPERFAMILY SSF56024 272 469 3.36E-39 T 11-10-2018 Patl_1467 5543c1d7ed24a5118322414811cf4cfa 484 PIRSF PIRSF000850 294 380 0.0028 T 11-10-2018 Patl_1467 5543c1d7ed24a5118322414811cf4cfa 484 PIRSF PIRSF000850 379 457 34.0 T 11-10-2018 Patl_1467 5543c1d7ed24a5118322414811cf4cfa 484 PIRSF PIRSF000850 113 206 0.24 T 11-10-2018 Patl_1467 5543c1d7ed24a5118322414811cf4cfa 484 SMART SM00155 219 246 3.4E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Patl_1467 5543c1d7ed24a5118322414811cf4cfa 484 SMART SM00155 397 424 7.5E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 Patl_1467 5543c1d7ed24a5118322414811cf4cfa 484 Gene3D G3DSA:3.30.870.10 314 455 1.4E-24 T 11-10-2018 Patl_1467 5543c1d7ed24a5118322414811cf4cfa 484 Pfam PF13091 PLD-like domain 325 448 1.0E-26 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Patl_1467 5543c1d7ed24a5118322414811cf4cfa 484 Pfam PF13091 PLD-like domain 137 278 2.1E-15 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 Patl_3700 5780e8203893dea0278304287f8b9768 422 SUPERFAMILY SSF81342 6 298 1.73E-89 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Patl_3700 5780e8203893dea0278304287f8b9768 422 Gene3D G3DSA:1.20.810.10 1 422 5.8E-143 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 Patl_3700 5780e8203893dea0278304287f8b9768 422 Pfam PF00033 Cytochrome b/b6/petB 25 212 2.2E-66 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Patl_3700 5780e8203893dea0278304287f8b9768 422 SUPERFAMILY SSF81648 299 413 1.7E-31 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Patl_3700 5780e8203893dea0278304287f8b9768 422 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 297 398 7.6E-38 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Patl_3700 5780e8203893dea0278304287f8b9768 422 PIRSF PIRSF038885 1 422 9.0E-151 T 11-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 Patl_0306 e93b1eaa02e07115b84aee515cf2d98b 284 SMART SM00382 87 276 4.1E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0306 e93b1eaa02e07115b84aee515cf2d98b 284 Gene3D G3DSA:3.40.50.300 58 272 1.6E-56 T 11-10-2018 Patl_0306 e93b1eaa02e07115b84aee515cf2d98b 284 ProSitePatterns PS00211 ABC transporters family signature. 200 214 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_0306 e93b1eaa02e07115b84aee515cf2d98b 284 SUPERFAMILY SSF52540 60 267 1.23E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0306 e93b1eaa02e07115b84aee515cf2d98b 284 Pfam PF00005 ABC transporter 82 228 2.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_0267 6ac4b024eb44620547271a8212b9d14e 268 SUPERFAMILY SSF53335 49 223 3.67E-12 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_0267 6ac4b024eb44620547271a8212b9d14e 268 Gene3D G3DSA:3.40.50.150 30 228 2.1E-19 T 11-10-2018 Patl_0267 6ac4b024eb44620547271a8212b9d14e 268 PIRSF PIRSF031679 1 268 1.7E-95 T 11-10-2018 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted Patl_2382 3863d1cb5fdc00b3e4335aae6b84fd53 407 SUPERFAMILY SSF55073 224 403 2.51E-53 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_2382 3863d1cb5fdc00b3e4335aae6b84fd53 407 SMART SM00044 196 385 1.4E-53 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Patl_2382 3863d1cb5fdc00b3e4335aae6b84fd53 407 ProSitePatterns PS00452 Guanylate cyclase signature. 336 359 - T 11-10-2018 IPR018297 Adenylyl cyclase class-4/guanylyl cyclase, conserved site GO:0009190|GO:0016849|GO:0035556 Patl_2382 3863d1cb5fdc00b3e4335aae6b84fd53 407 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 226 403 2.6E-53 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Patl_2382 3863d1cb5fdc00b3e4335aae6b84fd53 407 Gene3D G3DSA:3.30.70.1230 220 405 8.6E-61 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_2979 96c2ec883364835465fc104ca755bdbd 55 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 30 46 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Patl_2979 96c2ec883364835465fc104ca755bdbd 55 SUPERFAMILY SSF48150 2 52 5.58E-17 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Patl_2979 96c2ec883364835465fc104ca755bdbd 55 SMART SM00525 29 49 7.4E-5 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Patl_2979 96c2ec883364835465fc104ca755bdbd 55 Gene3D G3DSA:1.10.1670.10 1 54 3.0E-18 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Patl_2979 96c2ec883364835465fc104ca755bdbd 55 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 30 46 1.3E-5 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Patl_0643 0ccddc0bce025cafaa3d09949b8496f9 413 Gene3D G3DSA:3.30.565.10 253 411 1.8E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0643 0ccddc0bce025cafaa3d09949b8496f9 413 SMART SM00387 292 404 1.1E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0643 0ccddc0bce025cafaa3d09949b8496f9 413 SUPERFAMILY SSF55874 237 406 1.19E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0643 0ccddc0bce025cafaa3d09949b8496f9 413 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 296 403 2.3E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0643 0ccddc0bce025cafaa3d09949b8496f9 413 SMART SM00388 183 248 2.8E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_0643 0ccddc0bce025cafaa3d09949b8496f9 413 SUPERFAMILY SSF47384 166 246 9.42E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_0643 0ccddc0bce025cafaa3d09949b8496f9 413 Pfam PF00512 His Kinase A (phospho-acceptor) domain 185 245 1.0E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_0643 0ccddc0bce025cafaa3d09949b8496f9 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 343 3.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0643 0ccddc0bce025cafaa3d09949b8496f9 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 357 3.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0643 0ccddc0bce025cafaa3d09949b8496f9 413 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 382 3.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0643 0ccddc0bce025cafaa3d09949b8496f9 413 Pfam PF08521 Two-component sensor kinase N-terminal 31 105 6.5E-5 T 11-10-2018 IPR013727 Two-component sensor kinase, N-terminal Patl_0643 0ccddc0bce025cafaa3d09949b8496f9 413 Gene3D G3DSA:1.10.287.130 134 248 1.4E-19 T 11-10-2018 Patl_2450 c79dedb5a69f8d7a7776b155310a848a 214 SUPERFAMILY SSF52172 2 131 4.41E-35 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2450 c79dedb5a69f8d7a7776b155310a848a 214 SUPERFAMILY SSF46894 141 210 3.4E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_2450 c79dedb5a69f8d7a7776b155310a848a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 4.8E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2450 c79dedb5a69f8d7a7776b155310a848a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 4.8E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2450 c79dedb5a69f8d7a7776b155310a848a 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 4.8E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2450 c79dedb5a69f8d7a7776b155310a848a 214 Pfam PF00072 Response regulator receiver domain 4 115 1.0E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2450 c79dedb5a69f8d7a7776b155310a848a 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 4.7E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2450 c79dedb5a69f8d7a7776b155310a848a 214 Gene3D G3DSA:3.40.50.12740 2 209 4.1E-61 T 11-10-2018 Patl_2450 c79dedb5a69f8d7a7776b155310a848a 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_2450 c79dedb5a69f8d7a7776b155310a848a 214 SMART SM00448 2 115 3.1E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_2450 c79dedb5a69f8d7a7776b155310a848a 214 SMART SM00421 146 203 1.2E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0852 2b6c1b7a1bb34a591a62987e90be3a4b 355 SUPERFAMILY SSF55961 126 351 2.75E-26 T 11-10-2018 Patl_0852 2b6c1b7a1bb34a591a62987e90be3a4b 355 Pfam PF00355 Rieske [2Fe-2S] domain 15 96 6.9E-17 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Patl_0852 2b6c1b7a1bb34a591a62987e90be3a4b 355 Gene3D G3DSA:2.102.10.10 11 136 2.1E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Patl_0852 2b6c1b7a1bb34a591a62987e90be3a4b 355 SUPERFAMILY SSF50022 9 120 4.98E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Patl_0852 2b6c1b7a1bb34a591a62987e90be3a4b 355 Gene3D G3DSA:3.30.530.90 141 354 1.2E-41 T 11-10-2018 Patl_2121 a294cca2dbdc66195444f3553de01cbb 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 0.003 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Patl_2121 a294cca2dbdc66195444f3553de01cbb 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site Patl_2121 a294cca2dbdc66195444f3553de01cbb 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 23.015 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Patl_2121 a294cca2dbdc66195444f3553de01cbb 79 SUPERFAMILY SSF47336 1 76 8.38E-24 T 11-10-2018 IPR036736 ACP-like superfamily Patl_2121 a294cca2dbdc66195444f3553de01cbb 79 Gene3D G3DSA:1.10.1200.10 1 77 4.0E-30 T 11-10-2018 IPR036736 ACP-like superfamily Patl_2121 a294cca2dbdc66195444f3553de01cbb 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 2.2E-36 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Patl_2121 a294cca2dbdc66195444f3553de01cbb 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 5.1E-16 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain Patl_2429 700100dd2e91566c44058c71f24c8724 431 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 25 423 3.9E-168 T 11-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 Patl_2429 700100dd2e91566c44058c71f24c8724 431 Gene3D G3DSA:3.20.20.140 68 385 3.7E-170 T 11-10-2018 Patl_2429 700100dd2e91566c44058c71f24c8724 431 Pfam PF01979 Amidohydrolase family 64 426 2.2E-59 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Patl_2429 700100dd2e91566c44058c71f24c8724 431 Gene3D G3DSA:2.30.40.10 10 421 3.7E-170 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Patl_2429 700100dd2e91566c44058c71f24c8724 431 SUPERFAMILY SSF51556 67 370 1.76E-93 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_2429 700100dd2e91566c44058c71f24c8724 431 SUPERFAMILY SSF51338 23 82 9.18E-13 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Patl_2335 741bc69ae5ddac8cccbd5c26f76c790e 212 SUPERFAMILY SSF109604 9 208 7.22E-58 T 11-10-2018 Patl_2335 741bc69ae5ddac8cccbd5c26f76c790e 212 Pfam PF01966 HD domain 24 126 5.8E-8 T 11-10-2018 IPR006674 HD domain Patl_2335 741bc69ae5ddac8cccbd5c26f76c790e 212 Gene3D G3DSA:1.10.3210.50 1 211 4.3E-66 T 11-10-2018 Patl_0956 24d00f9e3dba3060c0c6fd5c1d616846 259 SUPERFAMILY SSF56235 2 252 1.12E-49 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_0956 24d00f9e3dba3060c0c6fd5c1d616846 259 Gene3D G3DSA:3.60.20.10 1 258 3.8E-95 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_0956 24d00f9e3dba3060c0c6fd5c1d616846 259 Pfam PF13230 Glutamine amidotransferases class-II 1 255 3.3E-107 T 11-10-2018 IPR026869 Putative glutamine amidotransferase type 2 Patl_4183 664d31259b0100bc3f75552f4252999b 481 SUPERFAMILY SSF58104 188 480 5.23E-58 T 11-10-2018 Patl_4183 664d31259b0100bc3f75552f4252999b 481 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 286 441 1.6E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_4183 664d31259b0100bc3f75552f4252999b 481 Gene3D G3DSA:1.10.287.950 157 481 1.9E-55 T 11-10-2018 Patl_4183 664d31259b0100bc3f75552f4252999b 481 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 346 375 5.6E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Patl_4183 664d31259b0100bc3f75552f4252999b 481 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 317 344 5.6E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Patl_4183 664d31259b0100bc3f75552f4252999b 481 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 18 5.6E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Patl_4183 664d31259b0100bc3f75552f4252999b 481 SMART SM00283 218 480 1.1E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_0715 4a298be33107951acde07cdd4086de87 176 Pfam PF09684 Phage tail protein (Tail_P2_I) 14 124 1.7E-5 T 11-10-2018 IPR006521 Tail protein I Patl_2824 761f7077c66a9f73239d7a4750de04c1 289 Pfam PF00849 RNA pseudouridylate synthase 66 198 5.4E-18 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_2824 761f7077c66a9f73239d7a4750de04c1 289 Gene3D G3DSA:3.30.70.580 67 228 3.3E-54 T 11-10-2018 Patl_2824 761f7077c66a9f73239d7a4750de04c1 289 Gene3D G3DSA:3.10.290.10 1 57 2.2E-22 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Patl_2824 761f7077c66a9f73239d7a4750de04c1 289 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Patl_2824 761f7077c66a9f73239d7a4750de04c1 289 SUPERFAMILY SSF55174 5 96 3.39E-15 T 11-10-2018 Patl_2824 761f7077c66a9f73239d7a4750de04c1 289 Gene3D G3DSA:3.30.70.1560 128 220 3.3E-54 T 11-10-2018 Patl_2824 761f7077c66a9f73239d7a4750de04c1 289 Pfam PF01479 S4 domain 4 47 5.1E-12 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_2824 761f7077c66a9f73239d7a4750de04c1 289 SMART SM00363 3 60 5.3E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_2824 761f7077c66a9f73239d7a4750de04c1 289 SUPERFAMILY SSF55120 66 234 3.24E-44 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_2824 761f7077c66a9f73239d7a4750de04c1 289 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 231 3.6E-58 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Patl_0658 a016fc0b397fc0a0c8a38b9f370a7096 337 Gene3D G3DSA:3.40.50.620 6 329 2.7E-137 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_0658 a016fc0b397fc0a0c8a38b9f370a7096 337 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 6.2E-112 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Patl_0658 a016fc0b397fc0a0c8a38b9f370a7096 337 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_0658 a016fc0b397fc0a0c8a38b9f370a7096 337 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 1.3E-75 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_0658 a016fc0b397fc0a0c8a38b9f370a7096 337 SUPERFAMILY SSF52374 5 330 1.84E-94 T 11-10-2018 Patl_0658 a016fc0b397fc0a0c8a38b9f370a7096 337 Gene3D G3DSA:1.10.240.10 186 298 2.7E-137 T 11-10-2018 Patl_0658 a016fc0b397fc0a0c8a38b9f370a7096 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 8.9E-29 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Patl_0658 a016fc0b397fc0a0c8a38b9f370a7096 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 8.9E-29 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Patl_0658 a016fc0b397fc0a0c8a38b9f370a7096 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 8.9E-29 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Patl_0658 a016fc0b397fc0a0c8a38b9f370a7096 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 8.9E-29 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Patl_0658 a016fc0b397fc0a0c8a38b9f370a7096 337 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 41.049 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 Patl_2841 fbba0bd88d16947cd0234ad5d15f0729 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 384 8.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2841 fbba0bd88d16947cd0234ad5d15f0729 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 8.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_2841 fbba0bd88d16947cd0234ad5d15f0729 445 Gene3D G3DSA:3.30.565.10 295 441 3.9E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2841 fbba0bd88d16947cd0234ad5d15f0729 445 Gene3D G3DSA:1.10.287.130 191 294 3.7E-9 T 11-10-2018 Patl_2841 fbba0bd88d16947cd0234ad5d15f0729 445 SUPERFAMILY SSF55874 296 437 2.1E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2841 fbba0bd88d16947cd0234ad5d15f0729 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 335 436 4.5E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2841 fbba0bd88d16947cd0234ad5d15f0729 445 SMART SM00387 335 441 1.6E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0962 68c5ce509bd555c352c106746bb59594 191 Pfam PF07638 ECF sigma factor 9 188 1.8E-44 T 11-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like Patl_0962 68c5ce509bd555c352c106746bb59594 191 SUPERFAMILY SSF88659 127 174 5.56E-5 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_0962 68c5ce509bd555c352c106746bb59594 191 SUPERFAMILY SSF88946 4 104 1.1E-7 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Patl_0962 68c5ce509bd555c352c106746bb59594 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 187 4.2E-14 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Patl_0962 68c5ce509bd555c352c106746bb59594 191 Gene3D G3DSA:1.10.10.10 115 189 3.8E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0962 68c5ce509bd555c352c106746bb59594 191 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 9 188 4.3E-59 T 11-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like Patl_0240 b7fe075837665b13ee68d683af1b542f 159 PIRSF PIRSF006291 1 159 2.9E-47 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 Patl_0240 b7fe075837665b13ee68d683af1b542f 159 Gene3D G3DSA:3.30.1360.100 82 159 1.6E-23 T 11-10-2018 Patl_0240 b7fe075837665b13ee68d683af1b542f 159 Pfam PF04612 Type II secretion system (T2SS), protein M 1 156 4.9E-49 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 Patl_0240 b7fe075837665b13ee68d683af1b542f 159 SUPERFAMILY SSF103054 82 157 6.02E-22 T 11-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily Patl_3082 d846afd946ec53bcc186abe9b69fc5cb 143 PIRSF PIRSF039090 1 134 1.5E-51 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Patl_3082 d846afd946ec53bcc186abe9b69fc5cb 143 SUPERFAMILY SSF101116 7 128 1.29E-37 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Patl_3082 d846afd946ec53bcc186abe9b69fc5cb 143 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 124 3.8E-25 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Patl_3082 d846afd946ec53bcc186abe9b69fc5cb 143 Pfam PF02561 Flagellar protein FliS 7 123 1.8E-35 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Patl_3082 d846afd946ec53bcc186abe9b69fc5cb 143 Gene3D G3DSA:1.20.120.340 2 128 2.2E-38 T 11-10-2018 Patl_1310 97337a0d8793e2a7fb175192ede4b34b 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 9.9E-69 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Patl_1310 97337a0d8793e2a7fb175192ede4b34b 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 87.035 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Patl_1310 97337a0d8793e2a7fb175192ede4b34b 149 Pfam PF03477 ATP cone domain 50 136 1.0E-18 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Patl_0393 8313a2ae6bbeb60d4fe0281e1eee85cf 373 Gene3D G3DSA:3.40.190.10 151 295 2.8E-11 T 11-10-2018 Patl_0393 8313a2ae6bbeb60d4fe0281e1eee85cf 373 SUPERFAMILY SSF53850 34 346 3.5E-31 T 11-10-2018 Patl_0393 8313a2ae6bbeb60d4fe0281e1eee85cf 373 PIRSF PIRSF029172 10 373 5.0E-106 T 11-10-2018 IPR027020 Protein ynjB Patl_0393 8313a2ae6bbeb60d4fe0281e1eee85cf 373 Pfam PF13416 Bacterial extracellular solute-binding protein 64 343 7.2E-18 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein Patl_0393 8313a2ae6bbeb60d4fe0281e1eee85cf 373 Gene3D G3DSA:3.40.190.10 71 338 2.8E-11 T 11-10-2018 Patl_0102 9264681e03f69d58a4e2e305542dd789 311 SUPERFAMILY SSF52540 32 295 1.52E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0102 9264681e03f69d58a4e2e305542dd789 311 SMART SM00382 40 218 1.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0102 9264681e03f69d58a4e2e305542dd789 311 Pfam PF07728 AAA domain (dynein-related subfamily) 44 209 3.3E-14 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Patl_2165 c0597efc90386603b012722478f6eb37 68 SUPERFAMILY SSF47473 21 67 6.67E-10 T 11-10-2018 IPR011992 EF-hand domain pair Patl_2165 c0597efc90386603b012722478f6eb37 68 Pfam PF13202 EF hand 21 39 2.5E-5 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 Patl_2165 c0597efc90386603b012722478f6eb37 68 Pfam PF13202 EF hand 49 67 1.2E-4 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 Patl_2165 c0597efc90386603b012722478f6eb37 68 ProSitePatterns PS00018 EF-hand calcium-binding domain. 54 66 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Patl_2165 c0597efc90386603b012722478f6eb37 68 Gene3D G3DSA:1.10.238.10 18 68 1.6E-10 T 11-10-2018 Patl_1472 45f19031a012f143e759c44167cab78b 231 Pfam PF02535 ZIP Zinc transporter 3 76 8.7E-9 T 11-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 Patl_1472 45f19031a012f143e759c44167cab78b 231 Pfam PF02535 ZIP Zinc transporter 77 227 2.6E-27 T 11-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 Patl_1213 5a490c5c484ff8a992efd7bf7cccc78c 724 Gene3D G3DSA:2.170.170.11 133 262 1.1E-257 T 11-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Patl_1213 5a490c5c484ff8a992efd7bf7cccc78c 724 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 720 0.0 T 11-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Patl_1213 5a490c5c484ff8a992efd7bf7cccc78c 724 SUPERFAMILY SSF51645 3 720 2.09E-279 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Patl_1213 5a490c5c484ff8a992efd7bf7cccc78c 724 Gene3D G3DSA:1.20.1220.12 582 723 4.1E-67 T 11-10-2018 Patl_1213 5a490c5c484ff8a992efd7bf7cccc78c 724 Hamap MF_00641 Malate synthase G [glcB]. 1 724 351.094 T 11-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Patl_1213 5a490c5c484ff8a992efd7bf7cccc78c 724 Pfam PF01274 Malate synthase 18 695 1.3E-149 T 11-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 Patl_1213 5a490c5c484ff8a992efd7bf7cccc78c 724 Gene3D G3DSA:3.20.20.360 8 577 1.1E-257 T 11-10-2018 Patl_0548 bbb3bf078a7f1e59150a2d766419e16f 184 Pfam PF01227 GTP cyclohydrolase I 7 182 9.9E-73 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Patl_0548 bbb3bf078a7f1e59150a2d766419e16f 184 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 183 36.22 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Patl_0548 bbb3bf078a7f1e59150a2d766419e16f 184 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 6 183 8.7E-74 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Patl_0548 bbb3bf078a7f1e59150a2d766419e16f 184 SUPERFAMILY SSF55620 5 183 3.63E-75 T 11-10-2018 Patl_0548 bbb3bf078a7f1e59150a2d766419e16f 184 Gene3D G3DSA:1.10.286.10 1 50 8.4E-20 T 11-10-2018 Patl_0548 bbb3bf078a7f1e59150a2d766419e16f 184 Gene3D G3DSA:3.30.1130.10 53 184 1.3E-60 T 11-10-2018 Patl_0548 bbb3bf078a7f1e59150a2d766419e16f 184 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 62 78 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Patl_0526 088df0f0fe57ad2c2c92fb407050a274 380 Pfam PF08495 FIST N domain 54 208 1.4E-13 T 11-10-2018 IPR013702 FIST domain, N-terminal Patl_0526 088df0f0fe57ad2c2c92fb407050a274 380 Pfam PF10442 FIST C domain 212 352 4.2E-20 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Patl_0526 088df0f0fe57ad2c2c92fb407050a274 380 SMART SM01204 212 355 1.2E-25 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Patl_0526 088df0f0fe57ad2c2c92fb407050a274 380 SMART SM00897 29 211 3.4E-19 T 11-10-2018 IPR013702 FIST domain, N-terminal Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 439 603 1.1E-41 T 11-10-2018 IPR000160 GGDEF domain Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 SMART SM00065 49 200 4.6E-4 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 SMART SM00065 247 399 0.0029 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 Gene3D G3DSA:3.20.20.450 617 861 2.0E-58 T 11-10-2018 IPR035919 EAL domain superfamily Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 Pfam PF00563 EAL domain 620 856 3.9E-54 T 11-10-2018 IPR001633 EAL domain Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 SMART SM00052 613 861 1.2E-38 T 11-10-2018 IPR001633 EAL domain Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 Gene3D G3DSA:3.30.450.40 218 401 3.1E-15 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 Gene3D G3DSA:3.30.450.40 24 203 3.8E-17 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 Gene3D G3DSA:3.30.70.270 435 616 1.8E-61 T 11-10-2018 Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 SUPERFAMILY SSF55781 231 407 3.05E-17 T 11-10-2018 Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 Pfam PF00990 Diguanylate cyclase, GGDEF domain 441 598 2.5E-50 T 11-10-2018 IPR000160 GGDEF domain Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 SMART SM00267 430 603 9.8E-66 T 11-10-2018 IPR000160 GGDEF domain Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 SUPERFAMILY SSF55781 15 191 2.43E-19 T 11-10-2018 Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 SUPERFAMILY SSF55073 446 604 5.49E-49 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 SUPERFAMILY SSF141868 619 856 4.84E-55 T 11-10-2018 IPR035919 EAL domain superfamily Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 Pfam PF13185 GAF domain 50 187 8.7E-11 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_0071 ae517b172c372c6d86c5df0757c7ae61 863 Pfam PF13185 GAF domain 250 390 4.4E-12 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_0196 59dc9d361cb95f0c5df278e1e52f1f22 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 74 1.4E-12 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Patl_0196 59dc9d361cb95f0c5df278e1e52f1f22 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 108 192 2.0E-9 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal Patl_0196 59dc9d361cb95f0c5df278e1e52f1f22 204 SUPERFAMILY SSF52833 1 84 2.77E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_0196 59dc9d361cb95f0c5df278e1e52f1f22 204 Gene3D G3DSA:1.20.1050.10 81 195 4.9E-39 T 11-10-2018 Patl_0196 59dc9d361cb95f0c5df278e1e52f1f22 204 Gene3D G3DSA:3.40.30.10 1 78 3.3E-24 T 11-10-2018 Patl_0196 59dc9d361cb95f0c5df278e1e52f1f22 204 SUPERFAMILY SSF47616 76 197 2.32E-29 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Patl_1778 4b31bbadd1ed329f302e082c3d72992b 180 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 2.7E-45 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 Patl_1746 bee10166190d3e730da0d0baea200033 1013 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 669 680 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Patl_1746 bee10166190d3e730da0d0baea200033 1013 Pfam PF01565 FAD binding domain 56 194 2.7E-37 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Patl_1746 bee10166190d3e730da0d0baea200033 1013 Gene3D G3DSA:1.10.45.10 519 542 4.6E-5 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Patl_1746 bee10166190d3e730da0d0baea200033 1013 SUPERFAMILY SSF46548 563 687 6.28E-8 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Patl_1746 bee10166190d3e730da0d0baea200033 1013 Pfam PF02913 FAD linked oxidases, C-terminal domain 285 541 1.1E-58 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Patl_1746 bee10166190d3e730da0d0baea200033 1013 Pfam PF13183 4Fe-4S dicluster domain 578 683 1.6E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Patl_1746 bee10166190d3e730da0d0baea200033 1013 SUPERFAMILY SSF55103 294 544 2.29E-49 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Patl_1746 bee10166190d3e730da0d0baea200033 1013 SUPERFAMILY SSF56176 18 283 4.09E-50 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Patl_1746 bee10166190d3e730da0d0baea200033 1013 Gene3D G3DSA:3.30.465.40 22 213 4.9E-46 T 11-10-2018 Patl_1746 bee10166190d3e730da0d0baea200033 1013 Gene3D G3DSA:3.30.70.2740 422 502 3.6E-5 T 11-10-2018 Patl_4101 fa3ae25530293d1b20d2681377435744 1071 Pfam PF00271 Helicase conserved C-terminal domain 807 878 2.2E-9 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_4101 fa3ae25530293d1b20d2681377435744 1071 Gene3D G3DSA:3.40.50.300 795 912 3.6E-10 T 11-10-2018 Patl_4101 fa3ae25530293d1b20d2681377435744 1071 SUPERFAMILY SSF52540 432 892 1.13E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4101 fa3ae25530293d1b20d2681377435744 1071 SMART SM00490 796 880 4.9E-8 T 11-10-2018 IPR001650 Helicase, C-terminal Patl_0170 427178fd5633196679139fd7e78f94ca 550 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 247 527 1.9E-87 T 11-10-2018 IPR013358 Pilus biogenesis, MshL Patl_0170 427178fd5633196679139fd7e78f94ca 550 Pfam PF07655 Secretin N-terminal domain 151 251 2.4E-27 T 11-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 Patl_0170 427178fd5633196679139fd7e78f94ca 550 Gene3D G3DSA:3.55.50.30 57 156 5.8E-12 T 11-10-2018 Patl_0170 427178fd5633196679139fd7e78f94ca 550 Pfam PF00263 Bacterial type II and III secretion system protein 350 527 1.2E-40 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 Patl_0170 427178fd5633196679139fd7e78f94ca 550 SMART SM00965 99 147 4.0E-6 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 Patl_0170 427178fd5633196679139fd7e78f94ca 550 PRINTS PR00811 Bacterial general secretion pathway protein D signature 280 290 7.9E-19 T 11-10-2018 IPR001775 GspD/PilQ family Patl_0170 427178fd5633196679139fd7e78f94ca 550 PRINTS PR00811 Bacterial general secretion pathway protein D signature 346 370 7.9E-19 T 11-10-2018 IPR001775 GspD/PilQ family Patl_0170 427178fd5633196679139fd7e78f94ca 550 PRINTS PR00811 Bacterial general secretion pathway protein D signature 515 529 7.9E-19 T 11-10-2018 IPR001775 GspD/PilQ family Patl_0170 427178fd5633196679139fd7e78f94ca 550 PRINTS PR00811 Bacterial general secretion pathway protein D signature 492 510 7.9E-19 T 11-10-2018 IPR001775 GspD/PilQ family Patl_4077 719c9decad972e89dde8d0edae750dc9 238 SUPERFAMILY SSF56784 10 236 1.97E-36 T 11-10-2018 IPR036412 HAD-like superfamily Patl_4077 719c9decad972e89dde8d0edae750dc9 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 2.7E-13 T 11-10-2018 Patl_4077 719c9decad972e89dde8d0edae750dc9 238 Gene3D G3DSA:3.40.50.1000 11 231 8.8E-51 T 11-10-2018 IPR023214 HAD superfamily Patl_4077 719c9decad972e89dde8d0edae750dc9 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 118 201 7.5E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_4077 719c9decad972e89dde8d0edae750dc9 238 Gene3D G3DSA:1.20.120.1600 24 110 8.8E-51 T 11-10-2018 Patl_0547 829026e3a9f30060bc95b4cc2f8c6157 142 Pfam PF03653 Uncharacterised protein family (UPF0093) 3 140 1.2E-47 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 Patl_0547 829026e3a9f30060bc95b4cc2f8c6157 142 PIRSF PIRSF004638 1 142 4.3E-50 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 Patl_1403 33af99323dcb0a310ba7e4e75334768e 104 SUPERFAMILY SSF103481 5 103 2.62E-21 T 11-10-2018 Patl_1403 33af99323dcb0a310ba7e4e75334768e 104 Gene3D G3DSA:1.10.3730.20 1 104 2.1E-33 T 11-10-2018 Patl_1403 33af99323dcb0a310ba7e4e75334768e 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 4.6E-30 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Patl_2504 7b1847b6f8848f056679771e0e7375f5 628 Gene3D G3DSA:2.60.120.10 2 134 5.5E-24 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_2504 7b1847b6f8848f056679771e0e7375f5 628 SMART SM00100 17 134 5.2E-12 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Patl_2504 7b1847b6f8848f056679771e0e7375f5 628 Gene3D G3DSA:3.10.580.10 146 289 1.0E-28 T 11-10-2018 Patl_2504 7b1847b6f8848f056679771e0e7375f5 628 SUPERFAMILY SSF54631 151 278 2.36E-25 T 11-10-2018 Patl_2504 7b1847b6f8848f056679771e0e7375f5 628 Pfam PF00571 CBS domain 160 216 5.4E-5 T 11-10-2018 IPR000644 CBS domain Patl_2504 7b1847b6f8848f056679771e0e7375f5 628 Pfam PF00571 CBS domain 226 278 8.1E-9 T 11-10-2018 IPR000644 CBS domain Patl_2504 7b1847b6f8848f056679771e0e7375f5 628 SUPERFAMILY SSF51206 8 134 2.88E-27 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like Patl_2504 7b1847b6f8848f056679771e0e7375f5 628 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 2.5E-46 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 Patl_2504 7b1847b6f8848f056679771e0e7375f5 628 SMART SM00116 233 280 3.9E-5 T 11-10-2018 IPR000644 CBS domain Patl_2504 7b1847b6f8848f056679771e0e7375f5 628 SMART SM00116 159 216 0.06 T 11-10-2018 IPR000644 CBS domain Patl_2504 7b1847b6f8848f056679771e0e7375f5 628 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 1.6E-38 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding Patl_2504 7b1847b6f8848f056679771e0e7375f5 628 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 5.8E-16 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Patl_2666 8d5f4463beebb1302b7c032f62fb3f0e 330 Gene3D G3DSA:3.40.50.1100 15 324 2.9E-113 T 11-10-2018 Patl_2666 8d5f4463beebb1302b7c032f62fb3f0e 330 SUPERFAMILY SSF53686 7 328 6.72E-87 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Patl_2666 8d5f4463beebb1302b7c032f62fb3f0e 330 Gene3D G3DSA:3.40.50.1100 48 156 2.9E-113 T 11-10-2018 Patl_2666 8d5f4463beebb1302b7c032f62fb3f0e 330 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 12 318 2.3E-53 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Patl_2666 8d5f4463beebb1302b7c032f62fb3f0e 330 PIRSF PIRSF006278 1 330 3.1E-101 T 11-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase Patl_2666 8d5f4463beebb1302b7c032f62fb3f0e 330 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 11 328 1.3E-103 T 11-10-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 Patl_3926 8ab1fe697d8759cec21058270e71e614 196 Pfam PF02627 Carboxymuconolactone decarboxylase family 40 123 8.0E-8 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Patl_3926 8ab1fe697d8759cec21058270e71e614 196 Gene3D G3DSA:1.20.1290.10 16 179 4.2E-33 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Patl_3926 8ab1fe697d8759cec21058270e71e614 196 SUPERFAMILY SSF69118 8 174 6.94E-40 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Patl_1817 8dcf05f167f280c03dbc1d6ff32dc26a 179 Gene3D G3DSA:1.20.58.320 1 78 8.1E-28 T 11-10-2018 Patl_1817 8dcf05f167f280c03dbc1d6ff32dc26a 179 Pfam PF06041 Bacterial protein of unknown function (DUF924) 6 175 1.3E-60 T 11-10-2018 IPR010323 Protein of unknown function DUF924 Patl_1817 8dcf05f167f280c03dbc1d6ff32dc26a 179 Gene3D G3DSA:1.25.40.10 79 179 2.1E-30 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1817 8dcf05f167f280c03dbc1d6ff32dc26a 179 SUPERFAMILY SSF48452 2 174 1.25E-64 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2776 48b6d2813598c25d6e256a587a0b3f1d 240 SMART SM00382 34 222 8.8E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2776 48b6d2813598c25d6e256a587a0b3f1d 240 Pfam PF00005 ABC transporter 25 173 5.2E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_2776 48b6d2813598c25d6e256a587a0b3f1d 240 SUPERFAMILY SSF52540 5 231 7.98E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2776 48b6d2813598c25d6e256a587a0b3f1d 240 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_2776 48b6d2813598c25d6e256a587a0b3f1d 240 Gene3D G3DSA:3.40.50.300 3 239 1.1E-66 T 11-10-2018 Patl_1668 520bf40b7d8ee4acfbce24b63333958b 429 Pfam PF03471 Transporter associated domain 343 416 4.3E-16 T 11-10-2018 IPR005170 Transporter-associated domain Patl_1668 520bf40b7d8ee4acfbce24b63333958b 429 Pfam PF01595 Domain of unknown function DUF21 13 181 5.9E-46 T 11-10-2018 IPR002550 CNNM, transmembrane domain Patl_1668 520bf40b7d8ee4acfbce24b63333958b 429 SUPERFAMILY SSF56176 342 424 1.74E-20 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Patl_1668 520bf40b7d8ee4acfbce24b63333958b 429 ProSitePatterns PS00018 EF-hand calcium-binding domain. 162 174 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Patl_1668 520bf40b7d8ee4acfbce24b63333958b 429 Pfam PF00571 CBS domain 277 324 1.5E-5 T 11-10-2018 IPR000644 CBS domain Patl_1668 520bf40b7d8ee4acfbce24b63333958b 429 Gene3D G3DSA:3.10.580.10 186 340 3.3E-44 T 11-10-2018 Patl_1668 520bf40b7d8ee4acfbce24b63333958b 429 Gene3D G3DSA:3.30.465.10 341 417 3.3E-26 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Patl_1668 520bf40b7d8ee4acfbce24b63333958b 429 SMART SM01091 341 419 1.0E-22 T 11-10-2018 IPR005170 Transporter-associated domain Patl_1668 520bf40b7d8ee4acfbce24b63333958b 429 SUPERFAMILY SSF54631 192 328 8.09E-26 T 11-10-2018 Patl_0465 db045669f496890d1cc6732f3a20ef0f 340 SUPERFAMILY SSF55073 184 337 4.0E-40 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_0465 db045669f496890d1cc6732f3a20ef0f 340 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 335 3.7E-39 T 11-10-2018 IPR000160 GGDEF domain Patl_0465 db045669f496890d1cc6732f3a20ef0f 340 SMART SM00267 169 337 7.4E-49 T 11-10-2018 IPR000160 GGDEF domain Patl_0465 db045669f496890d1cc6732f3a20ef0f 340 Gene3D G3DSA:3.30.70.270 165 335 3.1E-48 T 11-10-2018 Patl_0465 db045669f496890d1cc6732f3a20ef0f 340 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 333 3.7E-39 T 11-10-2018 IPR000160 GGDEF domain Patl_2777 a1013f0b9a5431cbadb674d326790ad2 489 SUPERFAMILY SSF111369 117 313 7.98E-15 T 11-10-2018 Patl_2777 a1013f0b9a5431cbadb674d326790ad2 489 Gene3D G3DSA:2.40.30.170 48 315 2.6E-69 T 11-10-2018 Patl_2777 a1013f0b9a5431cbadb674d326790ad2 489 Gene3D G3DSA:2.40.420.20 43 367 2.6E-69 T 11-10-2018 Patl_2777 a1013f0b9a5431cbadb674d326790ad2 489 Gene3D G3DSA:1.10.287.470 93 198 2.6E-69 T 11-10-2018 Patl_2777 a1013f0b9a5431cbadb674d326790ad2 489 Gene3D G3DSA:2.40.50.100 59 236 2.6E-69 T 11-10-2018 Patl_2777 a1013f0b9a5431cbadb674d326790ad2 489 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 308 2.0E-19 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Patl_2777 a1013f0b9a5431cbadb674d326790ad2 489 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 158 334 5.1E-29 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Patl_1368 869c0f4f53a03d43f18520d9aa301f32 515 Pfam PF00501 AMP-binding enzyme 15 420 9.6E-68 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Patl_1368 869c0f4f53a03d43f18520d9aa301f32 515 Gene3D G3DSA:3.40.50.12780 7 412 8.9E-78 T 11-10-2018 Patl_1368 869c0f4f53a03d43f18520d9aa301f32 515 Pfam PF13193 AMP-binding enzyme C-terminal domain 429 504 1.0E-9 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Patl_1368 869c0f4f53a03d43f18520d9aa301f32 515 Gene3D G3DSA:3.30.300.310 416 515 8.1E-24 T 11-10-2018 Patl_1368 869c0f4f53a03d43f18520d9aa301f32 515 SUPERFAMILY SSF56801 16 514 3.66E-108 T 11-10-2018 Patl_2066 91c9993fbeaafc2118756266235e5e66 220 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 213 1.2E-55 T 11-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain Patl_1555 dae94f0a444f2a27466816e745051fc3 87 SUPERFAMILY SSF117991 1 87 2.88E-29 T 11-10-2018 IPR027471 YbeD-like domain superfamily Patl_1555 dae94f0a444f2a27466816e745051fc3 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 22.595 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 Patl_1555 dae94f0a444f2a27466816e745051fc3 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 7.6E-26 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 Patl_1555 dae94f0a444f2a27466816e745051fc3 87 Gene3D G3DSA:3.30.70.260 1 87 1.8E-28 T 11-10-2018 Patl_1781 523edeb4592ef2480a807183b8e64273 305 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 302 36.365 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Patl_1781 523edeb4592ef2480a807183b8e64273 305 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 1 301 1.7E-105 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Patl_1781 523edeb4592ef2480a807183b8e64273 305 SUPERFAMILY SSF52540 31 142 1.7E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1781 523edeb4592ef2480a807183b8e64273 305 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 4 300 5.3E-87 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 Patl_2415 d1439ebab0daf470227e74a3b7d3a344 284 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 26 255 1.1E-105 T 11-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 Patl_2415 d1439ebab0daf470227e74a3b7d3a344 284 Gene3D G3DSA:3.40.50.300 5 283 8.0E-63 T 11-10-2018 Patl_2415 d1439ebab0daf470227e74a3b7d3a344 284 SMART SM00382 35 217 7.2E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2415 d1439ebab0daf470227e74a3b7d3a344 284 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_2415 d1439ebab0daf470227e74a3b7d3a344 284 SUPERFAMILY SSF52540 8 238 7.87E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2415 d1439ebab0daf470227e74a3b7d3a344 284 Pfam PF00005 ABC transporter 26 167 8.2E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_3764 b830ff5b2e5a6a78126e7639a959dd0e 61 Gene3D G3DSA:3.30.2310.20 1 61 1.0E-23 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Patl_3764 b830ff5b2e5a6a78126e7639a959dd0e 61 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 2 61 1.2E-16 T 11-10-2018 IPR007711 Toxin HigB-1 Patl_3764 b830ff5b2e5a6a78126e7639a959dd0e 61 SUPERFAMILY SSF143011 10 61 3.79E-12 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Patl_2992 7fc76ae004b946673f960080c9a42009 548 SUPERFAMILY SSF52540 296 523 1.1E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2992 7fc76ae004b946673f960080c9a42009 548 Pfam PF13469 Sulfotransferase family 317 496 1.9E-29 T 11-10-2018 Patl_2992 7fc76ae004b946673f960080c9a42009 548 SMART SM00028 140 173 5.6E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2992 7fc76ae004b946673f960080c9a42009 548 SMART SM00028 105 138 4.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2992 7fc76ae004b946673f960080c9a42009 548 SMART SM00028 174 207 0.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2992 7fc76ae004b946673f960080c9a42009 548 SMART SM00028 71 104 0.63 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2992 7fc76ae004b946673f960080c9a42009 548 SUPERFAMILY SSF48452 58 280 7.59E-28 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2992 7fc76ae004b946673f960080c9a42009 548 Pfam PF13431 Tetratricopeptide repeat 93 126 9.6E-5 T 11-10-2018 Patl_2992 7fc76ae004b946673f960080c9a42009 548 Gene3D G3DSA:3.40.50.300 309 542 1.9E-44 T 11-10-2018 Patl_2992 7fc76ae004b946673f960080c9a42009 548 Gene3D G3DSA:1.25.40.10 7 308 8.7E-34 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2992 7fc76ae004b946673f960080c9a42009 548 Pfam PF13181 Tetratricopeptide repeat 175 207 8.7E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2992 7fc76ae004b946673f960080c9a42009 548 Pfam PF13181 Tetratricopeptide repeat 141 172 0.0016 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_3135 789963180732ffa8f92304a6899c6c38 425 Gene3D G3DSA:3.30.50.30 3 53 6.3E-25 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Patl_3135 789963180732ffa8f92304a6899c6c38 425 SMART SM00382 112 356 1.8E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3135 789963180732ffa8f92304a6899c6c38 425 SMART SM01086 318 413 1.4E-33 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Patl_3135 789963180732ffa8f92304a6899c6c38 425 SUPERFAMILY SSF52540 62 403 4.31E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3135 789963180732ffa8f92304a6899c6c38 425 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 318 395 2.4E-16 T 11-10-2018 IPR019489 Clp ATPase, C-terminal Patl_3135 789963180732ffa8f92304a6899c6c38 425 Gene3D G3DSA:3.40.50.300 63 316 1.7E-109 T 11-10-2018 Patl_3135 789963180732ffa8f92304a6899c6c38 425 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.9E-19 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Patl_3135 789963180732ffa8f92304a6899c6c38 425 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 416 52.9 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Patl_3135 789963180732ffa8f92304a6899c6c38 425 SUPERFAMILY SSF57716 14 49 2.14E-11 T 11-10-2018 Patl_3135 789963180732ffa8f92304a6899c6c38 425 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 413 7.4E-209 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Patl_3135 789963180732ffa8f92304a6899c6c38 425 SMART SM00994 13 52 4.0E-23 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Patl_3135 789963180732ffa8f92304a6899c6c38 425 Gene3D G3DSA:1.10.8.60 317 425 5.9E-41 T 11-10-2018 Patl_3135 789963180732ffa8f92304a6899c6c38 425 Pfam PF07724 AAA domain (Cdc48 subfamily) 113 311 3.1E-49 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Patl_4166 14ba562245a40be93b5fd1c21aeaab1d 172 Pfam PF03929 PepSY-associated TM region 6 144 9.8E-9 T 11-10-2018 IPR005625 PepSY-associated TM protein Patl_2957 597dddd5335f397c0ed69c87064cf662 335 Gene3D G3DSA:3.40.50.720 132 300 6.2E-105 T 11-10-2018 Patl_2957 597dddd5335f397c0ed69c87064cf662 335 SUPERFAMILY SSF51735 123 297 2.4E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2957 597dddd5335f397c0ed69c87064cf662 335 Pfam PF00107 Zinc-binding dehydrogenase 165 275 6.7E-12 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_2957 597dddd5335f397c0ed69c87064cf662 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 92 1.8E-4 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_2957 597dddd5335f397c0ed69c87064cf662 335 Gene3D G3DSA:3.90.180.10 24 330 6.2E-105 T 11-10-2018 Patl_2957 597dddd5335f397c0ed69c87064cf662 335 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 8 332 5.2E-122 T 11-10-2018 IPR014188 Acrylyl-CoA reductase AcuI Patl_2957 597dddd5335f397c0ed69c87064cf662 335 SUPERFAMILY SSF50129 9 151 3.58E-36 T 11-10-2018 IPR011032 GroES-like superfamily Patl_2957 597dddd5335f397c0ed69c87064cf662 335 SMART SM00829 18 330 9.8E-6 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_2442 412a018b1237d98640fc771aecc0dd1b 552 SUPERFAMILY SSF50494 32 203 7.5E-13 T 11-10-2018 IPR009003 Peptidase S1, PA clan Patl_2442 412a018b1237d98640fc771aecc0dd1b 552 Pfam PF13365 Trypsin-like peptidase domain 52 190 5.4E-11 T 11-10-2018 Patl_2442 412a018b1237d98640fc771aecc0dd1b 552 Gene3D G3DSA:2.40.10.120 14 218 2.0E-14 T 11-10-2018 Patl_3665 0c167cdedaaecd7229eb42a878d7d266 329 Gene3D G3DSA:1.20.58.340 272 329 1.5E-12 T 11-10-2018 Patl_3665 0c167cdedaaecd7229eb42a878d7d266 329 Gene3D G3DSA:1.20.58.340 145 264 6.1E-29 T 11-10-2018 Patl_3665 0c167cdedaaecd7229eb42a878d7d266 329 Gene3D G3DSA:3.30.460.20 2 142 4.0E-32 T 11-10-2018 Patl_3665 0c167cdedaaecd7229eb42a878d7d266 329 Pfam PF01544 CorA-like Mg2+ transporter protein 42 324 5.5E-54 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Patl_3665 0c167cdedaaecd7229eb42a878d7d266 329 SUPERFAMILY SSF144083 264 326 1.31E-15 T 11-10-2018 Patl_3665 0c167cdedaaecd7229eb42a878d7d266 329 SUPERFAMILY SSF143865 12 261 5.36E-42 T 11-10-2018 Patl_2770 db203935909633705826abc05f2c639a 233 Pfam PF00583 Acetyltransferase (GNAT) family 137 219 4.3E-13 T 11-10-2018 IPR000182 GNAT domain Patl_2770 db203935909633705826abc05f2c639a 233 Gene3D G3DSA:3.40.630.30 43 228 6.8E-20 T 11-10-2018 Patl_2770 db203935909633705826abc05f2c639a 233 SUPERFAMILY SSF55729 106 225 9.62E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_3240 dc99445d3bd2523fed6e682063fec972 198 Pfam PF01061 ABC-2 type transporter 7 158 4.5E-15 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Patl_2700 e9b9fae915cd3d085db09ca1362d8be6 188 SUPERFAMILY SSF54593 38 182 3.16E-12 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2700 e9b9fae915cd3d085db09ca1362d8be6 188 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 37 176 1.3E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Patl_2700 e9b9fae915cd3d085db09ca1362d8be6 188 Gene3D G3DSA:3.10.180.10 39 184 2.4E-14 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_0655 69cd89691b1b44f0720425df02721db9 309 SMART SM00893 3 182 6.3E-57 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Patl_0655 69cd89691b1b44f0720425df02721db9 309 Pfam PF01012 Electron transfer flavoprotein domain 3 168 1.9E-40 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Patl_0655 69cd89691b1b44f0720425df02721db9 309 Gene3D G3DSA:3.40.50.1220 184 309 2.6E-58 T 11-10-2018 Patl_0655 69cd89691b1b44f0720425df02721db9 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 272 1.2E-36 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Patl_0655 69cd89691b1b44f0720425df02721db9 309 SUPERFAMILY SSF52402 3 186 2.72E-56 T 11-10-2018 Patl_0655 69cd89691b1b44f0720425df02721db9 309 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 253 279 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 Patl_0655 69cd89691b1b44f0720425df02721db9 309 PIRSF PIRSF000089 1 309 2.3E-109 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Patl_0655 69cd89691b1b44f0720425df02721db9 309 SUPERFAMILY SSF52467 187 308 1.84E-49 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Patl_0655 69cd89691b1b44f0720425df02721db9 309 Gene3D G3DSA:3.40.50.620 3 183 2.2E-56 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_1609 79efe1ee532a67ef777c65069db4d142 505 SUPERFAMILY SSF53271 250 483 3.67E-69 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Patl_1609 79efe1ee532a67ef777c65069db4d142 505 Pfam PF13522 Glutamine amidotransferase domain 63 208 1.5E-16 T 11-10-2018 Patl_1609 79efe1ee532a67ef777c65069db4d142 505 PIRSF PIRSF000485 1 481 1.1E-160 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Patl_1609 79efe1ee532a67ef777c65069db4d142 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 464 44.529 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Patl_1609 79efe1ee532a67ef777c65069db4d142 505 Gene3D G3DSA:3.60.20.10 2 412 4.4E-152 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_1609 79efe1ee532a67ef777c65069db4d142 505 Gene3D G3DSA:3.40.50.2020 277 441 4.4E-152 T 11-10-2018 Patl_1609 79efe1ee532a67ef777c65069db4d142 505 Pfam PF00156 Phosphoribosyl transferase domain 279 392 1.5E-6 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Patl_1609 79efe1ee532a67ef777c65069db4d142 505 SUPERFAMILY SSF56235 2 257 2.57E-71 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_1609 79efe1ee532a67ef777c65069db4d142 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 2.1E-155 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Patl_0982 f18bf3d56da60d3b2eae2cc774be6261 342 SUPERFAMILY SSF51735 2 179 4.19E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0982 f18bf3d56da60d3b2eae2cc774be6261 342 Gene3D G3DSA:3.30.360.10 155 315 8.9E-113 T 11-10-2018 Patl_0982 f18bf3d56da60d3b2eae2cc774be6261 342 SUPERFAMILY SSF55347 156 311 1.03E-46 T 11-10-2018 Patl_0982 f18bf3d56da60d3b2eae2cc774be6261 342 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 148 5.6E-27 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Patl_0982 f18bf3d56da60d3b2eae2cc774be6261 342 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 151 167 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Patl_0982 f18bf3d56da60d3b2eae2cc774be6261 342 Gene3D G3DSA:3.40.50.720 6 331 8.9E-113 T 11-10-2018 Patl_0982 f18bf3d56da60d3b2eae2cc774be6261 342 SMART SM00859 3 148 2.8E-43 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Patl_0982 f18bf3d56da60d3b2eae2cc774be6261 342 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 165 314 7.9E-11 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Patl_0982 f18bf3d56da60d3b2eae2cc774be6261 342 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 337 36.892 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Patl_0982 f18bf3d56da60d3b2eae2cc774be6261 342 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 338 2.8E-112 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Patl_1404 971aa64b1c86b41e5f01a427b58afed1 457 Gene3D G3DSA:3.20.20.80 34 325 1.1E-94 T 11-10-2018 Patl_1404 971aa64b1c86b41e5f01a427b58afed1 457 Pfam PF14600 Cellulose-binding domain 396 457 4.1E-32 T 11-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 Patl_1404 971aa64b1c86b41e5f01a427b58afed1 457 SMART SM00495 405 453 0.0023 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Patl_1404 971aa64b1c86b41e5f01a427b58afed1 457 SUPERFAMILY SSF51055 399 456 1.37E-13 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Patl_1404 971aa64b1c86b41e5f01a427b58afed1 457 SUPERFAMILY SSF103647 326 390 6.67E-11 T 11-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 Patl_1404 971aa64b1c86b41e5f01a427b58afed1 457 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 160 169 - T 11-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 Patl_1404 971aa64b1c86b41e5f01a427b58afed1 457 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 47 293 4.6E-56 T 11-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 Patl_1404 971aa64b1c86b41e5f01a427b58afed1 457 SUPERFAMILY SSF51445 34 324 1.74E-83 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_1404 971aa64b1c86b41e5f01a427b58afed1 457 Gene3D G3DSA:2.10.10.20 397 457 2.5E-19 T 11-10-2018 Patl_1740 39930d0e0a8ffe0c6c90c8507121eaf9 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 3.4E-30 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 Patl_1740 39930d0e0a8ffe0c6c90c8507121eaf9 143 SUPERFAMILY SSF55961 1 142 8.48E-30 T 11-10-2018 Patl_1740 39930d0e0a8ffe0c6c90c8507121eaf9 143 Gene3D G3DSA:3.30.530.20 3 143 4.0E-35 T 11-10-2018 IPR023393 START-like domain superfamily Patl_3981 7f62611c2bbbe5f5aa21e39a7e3d0b50 294 PIRSF PIRSF005651 1 294 2.8E-96 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Patl_3981 7f62611c2bbbe5f5aa21e39a7e3d0b50 294 SMART SM00244 18 188 1.7E-36 T 11-10-2018 IPR001107 Band 7 domain Patl_3981 7f62611c2bbbe5f5aa21e39a7e3d0b50 294 Gene3D G3DSA:3.30.479.30 54 194 3.7E-22 T 11-10-2018 Patl_3981 7f62611c2bbbe5f5aa21e39a7e3d0b50 294 Pfam PF01145 SPFH domain / Band 7 family 22 204 6.4E-33 T 11-10-2018 IPR001107 Band 7 domain Patl_3981 7f62611c2bbbe5f5aa21e39a7e3d0b50 294 TIGRFAM TIGR01932 hflC: HflC protein 1 155 4.1E-51 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Patl_3981 7f62611c2bbbe5f5aa21e39a7e3d0b50 294 TIGRFAM TIGR01932 hflC: HflC protein 146 288 6.4E-52 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 Patl_3981 7f62611c2bbbe5f5aa21e39a7e3d0b50 294 SUPERFAMILY SSF117892 57 193 5.1E-29 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily Patl_4108 2c46d18ae516eca814ed778f4a502cce 399 Pfam PF13609 Gram-negative porin 17 368 7.5E-8 T 11-10-2018 Patl_4108 2c46d18ae516eca814ed778f4a502cce 399 SUPERFAMILY SSF56935 22 399 7.33E-26 T 11-10-2018 Patl_4108 2c46d18ae516eca814ed778f4a502cce 399 Gene3D G3DSA:2.40.160.10 105 399 1.1E-6 T 11-10-2018 IPR023614 Porin domain superfamily Patl_2394 f034db31c4053eeedbdae90162a1c297 487 Pfam PF02321 Outer membrane efflux protein 44 231 5.0E-9 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Patl_2394 f034db31c4053eeedbdae90162a1c297 487 Pfam PF02321 Outer membrane efflux protein 291 412 5.1E-12 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Patl_2394 f034db31c4053eeedbdae90162a1c297 487 SUPERFAMILY SSF56954 21 470 9.81E-38 T 11-10-2018 Patl_2394 f034db31c4053eeedbdae90162a1c297 487 Gene3D G3DSA:1.20.1600.10 41 472 1.5E-35 T 11-10-2018 Patl_1690 e803ad198a3a949b52533ae4dcaf0b4a 148 Pfam PF01575 MaoC like domain 9 113 2.5E-22 T 11-10-2018 IPR002539 MaoC-like dehydratase domain Patl_1690 e803ad198a3a949b52533ae4dcaf0b4a 148 SUPERFAMILY SSF54637 8 147 3.23E-30 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_1690 e803ad198a3a949b52533ae4dcaf0b4a 148 Gene3D G3DSA:3.10.129.10 5 147 3.0E-35 T 11-10-2018 Patl_2224 18d78c22aa7d4c08c7ceb004d748e201 459 Gene3D G3DSA:3.20.20.140 64 381 1.5E-113 T 11-10-2018 Patl_2224 18d78c22aa7d4c08c7ceb004d748e201 459 SUPERFAMILY SSF51556 63 380 1.45E-87 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_2224 18d78c22aa7d4c08c7ceb004d748e201 459 SUPERFAMILY SSF51338 9 455 3.18E-19 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Patl_2224 18d78c22aa7d4c08c7ceb004d748e201 459 Pfam PF01979 Amidohydrolase family 60 429 2.1E-59 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Patl_2224 18d78c22aa7d4c08c7ceb004d748e201 459 Gene3D G3DSA:2.30.40.10 29 429 1.5E-113 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Patl_2437 d42837a0a3bd39eb6e454ca2257b5ec6 82 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 3.4E-37 T 11-10-2018 IPR021724 Protein of unknown function DUF3297 Patl_0837 f8f10e4902d1213f8d1643c9a6e17649 307 Gene3D G3DSA:3.40.50.1820 41 302 4.6E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0837 f8f10e4902d1213f8d1643c9a6e17649 307 SUPERFAMILY SSF53474 42 302 4.86E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0837 f8f10e4902d1213f8d1643c9a6e17649 307 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 148 160 - T 11-10-2018 IPR033140 Lipase, GDXG, putative serine active site Patl_0837 f8f10e4902d1213f8d1643c9a6e17649 307 Pfam PF07859 alpha/beta hydrolase fold 78 164 5.0E-14 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 Patl_1017 ea61459328e13f3d7c30cd2d2c5b4b97 218 Gene3D G3DSA:3.40.109.10 1 218 2.7E-49 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Patl_1017 ea61459328e13f3d7c30cd2d2c5b4b97 218 Pfam PF00881 Nitroreductase family 10 193 4.3E-22 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Patl_1017 ea61459328e13f3d7c30cd2d2c5b4b97 218 SUPERFAMILY SSF55469 5 215 2.62E-52 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Patl_0759 b43f32a91dd8e9084fbbe364fd5b98e2 276 SUPERFAMILY SSF81301 16 133 4.99E-6 T 11-10-2018 Patl_0759 b43f32a91dd8e9084fbbe364fd5b98e2 276 Gene3D G3DSA:3.30.460.10 11 144 2.9E-14 T 11-10-2018 Patl_0759 b43f32a91dd8e9084fbbe364fd5b98e2 276 Pfam PF04439 Streptomycin adenylyltransferase 16 185 2.3E-5 T 11-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase Patl_0058 22abeae916941b0e4b794e08dbe76192 139 Gene3D G3DSA:3.40.190.10 19 138 4.0E-14 T 11-10-2018 Patl_0058 22abeae916941b0e4b794e08dbe76192 139 SUPERFAMILY SSF53850 19 135 3.8E-16 T 11-10-2018 Patl_2277 e7136e8659692da12e8d944c087e5afc 139 Gene3D G3DSA:3.30.420.270 63 131 2.7E-14 T 11-10-2018 Patl_2277 e7136e8659692da12e8d944c087e5afc 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 133 2.6E-27 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Patl_3109 27495c1e5989f461c260fbe0d6e0e3d6 738 SUPERFAMILY SSF56935 31 738 3.89E-97 T 11-10-2018 Patl_3109 27495c1e5989f461c260fbe0d6e0e3d6 738 Gene3D G3DSA:2.170.130.10 39 157 3.5E-15 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_3109 27495c1e5989f461c260fbe0d6e0e3d6 738 Pfam PF00593 TonB dependent receptor 260 737 2.4E-35 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3109 27495c1e5989f461c260fbe0d6e0e3d6 738 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 150 4.8E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3520 afa6e67857a12f32c82406b3af4dca1a 487 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 27 394 40.949 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_3520 afa6e67857a12f32c82406b3af4dca1a 487 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 30 384 8.1E-128 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_3520 afa6e67857a12f32c82406b3af4dca1a 487 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 343 367 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_3520 afa6e67857a12f32c82406b3af4dca1a 487 Pfam PF01098 Cell cycle protein 32 384 1.1E-111 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_2420 3ef104b8d1029cb589de9e2788513c91 338 Pfam PF00962 Adenosine/AMP deaminase 15 333 1.0E-73 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 Patl_2420 3ef104b8d1029cb589de9e2788513c91 338 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 15 334 3.0E-111 T 11-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 Patl_2420 3ef104b8d1029cb589de9e2788513c91 338 Gene3D G3DSA:3.20.20.140 6 338 6.0E-100 T 11-10-2018 Patl_2420 3ef104b8d1029cb589de9e2788513c91 338 Hamap MF_01962 Adenine deaminase. 11 323 78.915 T 11-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Patl_2420 3ef104b8d1029cb589de9e2788513c91 338 SUPERFAMILY SSF51556 11 335 2.54E-86 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_1943 eb478fd5f8c9f185df2479706c2527f4 420 SUPERFAMILY SSF53098 18 396 7.59E-64 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_1943 eb478fd5f8c9f185df2479706c2527f4 420 Pfam PF01609 Transposase DDE domain 109 344 1.4E-19 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Patl_3025 09bb085691992012b3b567c4e36954c8 259 Gene3D G3DSA:3.40.50.300 1 254 2.2E-60 T 11-10-2018 Patl_3025 09bb085691992012b3b567c4e36954c8 259 SUPERFAMILY SSF52540 2 252 5.54E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3025 09bb085691992012b3b567c4e36954c8 259 Pfam PF13614 AAA domain 2 180 8.7E-46 T 11-10-2018 IPR025669 AAA domain Patl_2373 de994df48ec882198eacbca9f46f5ae2 72 SUPERFAMILY SSF50249 1 70 1.96E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_2373 de994df48ec882198eacbca9f46f5ae2 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.2E-27 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Patl_2373 de994df48ec882198eacbca9f46f5ae2 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 3.3E-38 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Patl_2373 de994df48ec882198eacbca9f46f5ae2 72 SMART SM00316 4 72 4.7E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 Patl_2373 de994df48ec882198eacbca9f46f5ae2 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.781 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Patl_2373 de994df48ec882198eacbca9f46f5ae2 72 Gene3D G3DSA:2.40.50.140 1 72 1.4E-36 T 11-10-2018 Patl_4311 a9959b799ede54657b558f1909a5b0c1 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.403 T 11-10-2018 IPR007551 Protein of unknown function DUF520 Patl_4311 a9959b799ede54657b558f1909a5b0c1 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 2.0E-63 T 11-10-2018 IPR007551 Protein of unknown function DUF520 Patl_4311 a9959b799ede54657b558f1909a5b0c1 160 Gene3D G3DSA:3.30.70.860 95 160 4.8E-30 T 11-10-2018 IPR035571 UPF0234-like, C-terminal Patl_4311 a9959b799ede54657b558f1909a5b0c1 160 Gene3D G3DSA:3.30.70.990 9 94 9.1E-29 T 11-10-2018 IPR035570 UPF0234, N-terminal Patl_4311 a9959b799ede54657b558f1909a5b0c1 160 SUPERFAMILY SSF89963 2 86 6.02E-30 T 11-10-2018 IPR036183 YajQ-like superfamily Patl_4311 a9959b799ede54657b558f1909a5b0c1 160 SUPERFAMILY SSF89963 88 160 3.92E-30 T 11-10-2018 IPR036183 YajQ-like superfamily Patl_0236 0bb9f7329a01ea08270af62cefbb5e16 131 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 3.9E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0236 0bb9f7329a01ea08270af62cefbb5e16 131 SUPERFAMILY SSF54523 44 125 1.81E-25 T 11-10-2018 Patl_0236 0bb9f7329a01ea08270af62cefbb5e16 131 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 32 3.4E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0236 0bb9f7329a01ea08270af62cefbb5e16 131 Gene3D G3DSA:3.30.1300.30 36 130 2.0E-26 T 11-10-2018 Patl_0236 0bb9f7329a01ea08270af62cefbb5e16 131 TIGRFAM TIGR01707 gspI: type II secretion system protein I 12 110 2.3E-27 T 11-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 Patl_0236 0bb9f7329a01ea08270af62cefbb5e16 131 Pfam PF02501 Type II secretion system (T2SS), protein I 46 124 4.5E-26 T 11-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 Patl_0236 0bb9f7329a01ea08270af62cefbb5e16 131 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_4151 08afa9f730dcbb53d2cb1616301f6d57 807 SUPERFAMILY SSF82866 602 797 2.09E-33 T 11-10-2018 Patl_4151 08afa9f730dcbb53d2cb1616301f6d57 807 Pfam PF03176 MMPL family 221 419 2.7E-14 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Patl_4151 08afa9f730dcbb53d2cb1616301f6d57 807 Gene3D G3DSA:1.20.1640.10 614 805 7.0E-21 T 11-10-2018 Patl_4151 08afa9f730dcbb53d2cb1616301f6d57 807 Gene3D G3DSA:1.20.1640.10 250 428 6.4E-8 T 11-10-2018 Patl_4151 08afa9f730dcbb53d2cb1616301f6d57 807 SUPERFAMILY SSF82866 229 418 3.14E-24 T 11-10-2018 Patl_4151 08afa9f730dcbb53d2cb1616301f6d57 807 Pfam PF02460 Patched family 581 798 2.3E-9 T 11-10-2018 IPR003392 Protein patched/dispatched GO:0016021 Patl_3752 cd16d69984e69b2ca0edb896c43b0e1d 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 95 7.5E-29 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Patl_3752 cd16d69984e69b2ca0edb896c43b0e1d 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 Patl_3752 cd16d69984e69b2ca0edb896c43b0e1d 96 Gene3D G3DSA:2.30.33.40 1 96 1.2E-35 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Patl_3752 cd16d69984e69b2ca0edb896c43b0e1d 96 SMART SM00883 2 95 4.9E-46 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Patl_3752 cd16d69984e69b2ca0edb896c43b0e1d 96 SUPERFAMILY SSF50129 1 96 2.12E-30 T 11-10-2018 IPR011032 GroES-like superfamily Patl_3752 cd16d69984e69b2ca0edb896c43b0e1d 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.059 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Patl_3752 cd16d69984e69b2ca0edb896c43b0e1d 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.4E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Patl_3752 cd16d69984e69b2ca0edb896c43b0e1d 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.4E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Patl_3752 cd16d69984e69b2ca0edb896c43b0e1d 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.4E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Patl_3752 cd16d69984e69b2ca0edb896c43b0e1d 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.4E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Patl_3108 9fa5d4b36166a285a810ea38fa3f6da1 318 SUPERFAMILY SSF50494 108 302 9.13E-23 T 11-10-2018 IPR009003 Peptidase S1, PA clan Patl_3108 9fa5d4b36166a285a810ea38fa3f6da1 318 Gene3D G3DSA:2.40.10.10 115 210 4.5E-23 T 11-10-2018 Patl_3108 9fa5d4b36166a285a810ea38fa3f6da1 318 Pfam PF13365 Trypsin-like peptidase domain 129 277 1.9E-8 T 11-10-2018 Patl_3108 9fa5d4b36166a285a810ea38fa3f6da1 318 Gene3D G3DSA:2.40.10.10 107 293 4.5E-23 T 11-10-2018 Patl_2904 95e5e4d323477ce26283129012ce33cf 914 Pfam PF00593 TonB dependent receptor 341 911 2.0E-26 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_2904 95e5e4d323477ce26283129012ce33cf 914 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 170 3.4E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_2904 95e5e4d323477ce26283129012ce33cf 914 Gene3D G3DSA:2.170.130.10 39 174 1.6E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_2904 95e5e4d323477ce26283129012ce33cf 914 SUPERFAMILY SSF56935 44 911 1.13E-79 T 11-10-2018 Patl_3065 071cd69f571231805de22aba22901b5b 289 SUPERFAMILY SSF53448 4 237 1.5E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3065 071cd69f571231805de22aba22901b5b 289 Pfam PF00535 Glycosyl transferase family 2 6 136 6.4E-37 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Patl_3065 071cd69f571231805de22aba22901b5b 289 Gene3D G3DSA:3.90.550.10 1 274 1.6E-53 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_0791 a90bf4aa832cbc57f8fc7d09d9fa37af 303 PIRSF PIRSF004654 1 302 3.6E-126 T 11-10-2018 IPR023605 Lipoprotein NlpI Patl_0791 a90bf4aa832cbc57f8fc7d09d9fa37af 303 Gene3D G3DSA:1.25.40.10 30 301 1.4E-79 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0791 a90bf4aa832cbc57f8fc7d09d9fa37af 303 SUPERFAMILY SSF48452 39 292 1.36E-67 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0791 a90bf4aa832cbc57f8fc7d09d9fa37af 303 SMART SM00028 244 277 290.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0791 a90bf4aa832cbc57f8fc7d09d9fa37af 303 SMART SM00028 72 105 33.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0791 a90bf4aa832cbc57f8fc7d09d9fa37af 303 SMART SM00028 106 139 0.0048 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0791 a90bf4aa832cbc57f8fc7d09d9fa37af 303 SMART SM00028 140 173 110.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_2886 af2c39355a7c716c73c691365fb05e4f 332 Gene3D G3DSA:3.20.10.10 150 314 1.7E-94 T 11-10-2018 Patl_2886 af2c39355a7c716c73c691365fb05e4f 332 Gene3D G3DSA:3.30.470.10 4 327 1.7E-94 T 11-10-2018 Patl_2886 af2c39355a7c716c73c691365fb05e4f 332 SUPERFAMILY SSF56752 3 328 1.03E-79 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Patl_2886 af2c39355a7c716c73c691365fb05e4f 332 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 22 331 2.1E-94 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 Patl_2886 af2c39355a7c716c73c691365fb05e4f 332 Pfam PF01063 Amino-transferase class IV 48 285 2.5E-28 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Patl_2886 af2c39355a7c716c73c691365fb05e4f 332 PIRSF PIRSF006468 2 332 1.9E-96 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 Patl_1393 c3cfb6b5607b4f2faa1b1b71b70b5c00 427 SUPERFAMILY SSF53300 250 356 9.73E-5 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Patl_1393 c3cfb6b5607b4f2faa1b1b71b70b5c00 427 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 421 37.439 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 Patl_1393 c3cfb6b5607b4f2faa1b1b71b70b5c00 427 Pfam PF04285 Protein of unknown function (DUF444) 3 418 9.7E-178 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 Patl_2711 1f0c285288101e917c2c290233c58dbb 762 SUPERFAMILY SSF56935 45 762 2.66E-103 T 11-10-2018 Patl_2711 1f0c285288101e917c2c290233c58dbb 762 Gene3D G3DSA:2.40.170.20 52 762 9.2E-113 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_2711 1f0c285288101e917c2c290233c58dbb 762 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 166 2.3E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_2711 1f0c285288101e917c2c290233c58dbb 762 Pfam PF00593 TonB dependent receptor 275 761 1.2E-26 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_2556 35d5307675c286a75aefbed8a51b8e44 410 SUPERFAMILY SSF53383 3 406 5.72E-94 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_2556 35d5307675c286a75aefbed8a51b8e44 410 Gene3D G3DSA:3.90.1150.10 33 396 1.1E-118 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_2556 35d5307675c286a75aefbed8a51b8e44 410 Pfam PF00155 Aminotransferase class I and II 40 397 4.3E-47 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Patl_2556 35d5307675c286a75aefbed8a51b8e44 410 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 255 264 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Patl_2556 35d5307675c286a75aefbed8a51b8e44 410 Gene3D G3DSA:3.40.640.10 50 308 1.1E-118 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_1492 b416e8a09faa73618f0a4c8ebb204640 186 Pfam PF00959 Phage lysozyme 73 179 8.9E-18 T 11-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 Patl_1492 b416e8a09faa73618f0a4c8ebb204640 186 Gene3D G3DSA:1.10.530.40 47 186 8.7E-47 T 11-10-2018 Patl_1492 b416e8a09faa73618f0a4c8ebb204640 186 SUPERFAMILY SSF53955 45 184 9.21E-43 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Patl_2714 524a9824373cbdbc64bb13746c21a162 396 SUPERFAMILY SSF89796 2 396 1.31E-110 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily Patl_2714 524a9824373cbdbc64bb13746c21a162 396 Pfam PF02515 CoA-transferase family III 6 373 7.4E-110 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 Patl_2714 524a9824373cbdbc64bb13746c21a162 396 Gene3D G3DSA:3.30.1540.10 232 325 7.1E-109 T 11-10-2018 Patl_2714 524a9824373cbdbc64bb13746c21a162 396 Gene3D G3DSA:3.40.50.10540 5 390 7.1E-109 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily Patl_2689 6e2460e50eec5aef4e698b86eec4c858 350 Gene3D G3DSA:3.20.20.150 13 326 1.9E-70 T 11-10-2018 Patl_2689 6e2460e50eec5aef4e698b86eec4c858 350 SUPERFAMILY SSF51658 8 322 2.35E-62 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily Patl_2689 6e2460e50eec5aef4e698b86eec4c858 350 Pfam PF07582 AP endonuclease family 2 C terminus 280 334 9.8E-21 T 11-10-2018 IPR011418 AP endonuclease, family 2, C-terminal Patl_2689 6e2460e50eec5aef4e698b86eec4c858 350 Pfam PF01261 Xylose isomerase-like TIM barrel 29 279 1.1E-36 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Patl_3521 aff4b4ad5da7cf9983069f72fa2e1502 441 Gene3D G3DSA:3.40.1190.10 92 294 1.0E-60 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Patl_3521 aff4b4ad5da7cf9983069f72fa2e1502 441 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 433 32.992 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Patl_3521 aff4b4ad5da7cf9983069f72fa2e1502 441 Gene3D G3DSA:3.40.50.720 5 91 1.2E-18 T 11-10-2018 Patl_3521 aff4b4ad5da7cf9983069f72fa2e1502 441 SUPERFAMILY SSF51984 6 92 3.01E-17 T 11-10-2018 Patl_3521 aff4b4ad5da7cf9983069f72fa2e1502 441 Pfam PF02875 Mur ligase family, glutamate ligase domain 296 370 6.0E-8 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Patl_3521 aff4b4ad5da7cf9983069f72fa2e1502 441 SUPERFAMILY SSF53623 93 292 7.59E-48 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Patl_3521 aff4b4ad5da7cf9983069f72fa2e1502 441 SUPERFAMILY SSF53244 294 433 8.85E-42 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Patl_3521 aff4b4ad5da7cf9983069f72fa2e1502 441 Pfam PF08245 Mur ligase middle domain 108 275 7.0E-26 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Patl_3521 aff4b4ad5da7cf9983069f72fa2e1502 441 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 431 2.9E-116 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Patl_3521 aff4b4ad5da7cf9983069f72fa2e1502 441 Gene3D G3DSA:3.90.190.20 295 429 2.9E-42 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Patl_3873 45928abf85b231e493891c6a06d3789f 642 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 98 348 2.6E-41 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Patl_3873 45928abf85b231e493891c6a06d3789f 642 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 244 257 2.0E-17 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Patl_3873 45928abf85b231e493891c6a06d3789f 642 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 338 357 2.0E-17 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Patl_3873 45928abf85b231e493891c6a06d3789f 642 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 544 557 2.0E-17 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Patl_3873 45928abf85b231e493891c6a06d3789f 642 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 103 121 2.0E-17 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Patl_3873 45928abf85b231e493891c6a06d3789f 642 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 127 139 2.0E-17 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Patl_3873 45928abf85b231e493891c6a06d3789f 642 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 282 295 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Patl_3873 45928abf85b231e493891c6a06d3789f 642 SUPERFAMILY SSF50621 458 570 1.44E-10 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Patl_3873 45928abf85b231e493891c6a06d3789f 642 PRINTS PR01180 Arginine decarboxylase signature 177 198 3.2E-63 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Patl_3873 45928abf85b231e493891c6a06d3789f 642 PRINTS PR01180 Arginine decarboxylase signature 466 487 3.2E-63 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Patl_3873 45928abf85b231e493891c6a06d3789f 642 PRINTS PR01180 Arginine decarboxylase signature 491 516 3.2E-63 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Patl_3873 45928abf85b231e493891c6a06d3789f 642 PRINTS PR01180 Arginine decarboxylase signature 151 166 3.2E-63 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Patl_3873 45928abf85b231e493891c6a06d3789f 642 PRINTS PR01180 Arginine decarboxylase signature 201 223 3.2E-63 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Patl_3873 45928abf85b231e493891c6a06d3789f 642 PRINTS PR01180 Arginine decarboxylase signature 328 345 3.2E-63 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Patl_3873 45928abf85b231e493891c6a06d3789f 642 PRINTS PR01180 Arginine decarboxylase signature 544 565 3.2E-63 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Patl_3873 45928abf85b231e493891c6a06d3789f 642 PRINTS PR01180 Arginine decarboxylase signature 71 86 3.2E-63 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Patl_3873 45928abf85b231e493891c6a06d3789f 642 PRINTS PR01180 Arginine decarboxylase signature 95 109 3.2E-63 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Patl_3873 45928abf85b231e493891c6a06d3789f 642 Gene3D G3DSA:1.20.58.930 371 462 2.1E-219 T 11-10-2018 Patl_3873 45928abf85b231e493891c6a06d3789f 642 Gene3D G3DSA:3.20.20.10 72 353 2.1E-219 T 11-10-2018 IPR029066 PLP-binding barrel Patl_3873 45928abf85b231e493891c6a06d3789f 642 TIGRFAM TIGR01273 speA: arginine decarboxylase 9 640 2.6E-217 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Patl_3873 45928abf85b231e493891c6a06d3789f 642 Gene3D G3DSA:2.40.37.10 18 567 2.1E-219 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Patl_3873 45928abf85b231e493891c6a06d3789f 642 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 103 121 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Patl_3873 45928abf85b231e493891c6a06d3789f 642 SUPERFAMILY SSF51419 72 351 5.05E-61 T 11-10-2018 IPR029066 PLP-binding barrel Patl_3873 45928abf85b231e493891c6a06d3789f 642 PIRSF PIRSF001336 1 642 1.7E-246 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Patl_3425 f75a1b735dd1f2d7aa43b7d6623d8ecf 452 Gene3D G3DSA:3.30.70.260 312 384 9.9E-42 T 11-10-2018 Patl_3425 f75a1b735dd1f2d7aa43b7d6623d8ecf 452 SUPERFAMILY SSF55021 299 395 3.01E-15 T 11-10-2018 Patl_3425 f75a1b735dd1f2d7aa43b7d6623d8ecf 452 PIRSF PIRSF000726 4 452 7.9E-125 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Patl_3425 f75a1b735dd1f2d7aa43b7d6623d8ecf 452 ProSitePatterns PS00324 Aspartokinase signature. 8 16 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Patl_3425 f75a1b735dd1f2d7aa43b7d6623d8ecf 452 SUPERFAMILY SSF55021 377 450 8.5E-13 T 11-10-2018 Patl_3425 f75a1b735dd1f2d7aa43b7d6623d8ecf 452 Gene3D G3DSA:3.30.70.260 306 447 9.9E-42 T 11-10-2018 Patl_3425 f75a1b735dd1f2d7aa43b7d6623d8ecf 452 SUPERFAMILY SSF53633 7 295 3.93E-73 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Patl_3425 f75a1b735dd1f2d7aa43b7d6623d8ecf 452 Gene3D G3DSA:1.20.120.1320 44 137 2.4E-96 T 11-10-2018 Patl_3425 f75a1b735dd1f2d7aa43b7d6623d8ecf 452 Gene3D G3DSA:3.40.1160.10 8 292 2.4E-96 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Patl_3425 f75a1b735dd1f2d7aa43b7d6623d8ecf 452 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 450 4.9E-123 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Patl_3425 f75a1b735dd1f2d7aa43b7d6623d8ecf 452 Pfam PF00696 Amino acid kinase family 7 280 1.4E-45 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Patl_1852 025bbf3693a392cd7a846c011cb20f59 638 SUPERFAMILY SSF52266 102 580 1.01E-66 T 11-10-2018 Patl_1852 025bbf3693a392cd7a846c011cb20f59 638 Gene3D G3DSA:2.60.120.260 234 370 4.7E-11 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_1852 025bbf3693a392cd7a846c011cb20f59 638 Gene3D G3DSA:3.40.50.1110 410 527 4.3E-14 T 11-10-2018 IPR036514 SGNH hydrolase superfamily Patl_1852 025bbf3693a392cd7a846c011cb20f59 638 SUPERFAMILY SSF49785 255 368 4.62E-14 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_1852 025bbf3693a392cd7a846c011cb20f59 638 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 414 513 1.2E-13 T 11-10-2018 IPR005181 Sialate O-acetylesterase domain Patl_2796 460cf1b6f400dee5b5334165cb35051a 171 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 6 167 21.902 T 11-10-2018 IPR022920 Disulphide bond formation protein DsbB Patl_2796 460cf1b6f400dee5b5334165cb35051a 171 Pfam PF02600 Disulfide bond formation protein DsbB 11 159 1.3E-42 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 Patl_2796 460cf1b6f400dee5b5334165cb35051a 171 SUPERFAMILY SSF158442 14 161 4.05E-42 T 11-10-2018 IPR023380 DsbB-like superfamily Patl_2796 460cf1b6f400dee5b5334165cb35051a 171 Gene3D G3DSA:1.20.1550.10 1 170 9.6E-51 T 11-10-2018 IPR023380 DsbB-like superfamily Patl_4204 373dbc1650e36e3ca1bf586cc9c5fdb2 328 Pfam PF02355 Protein export membrane protein 134 304 1.5E-53 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Patl_4204 373dbc1650e36e3ca1bf586cc9c5fdb2 328 SUPERFAMILY SSF82866 143 303 1.7E-32 T 11-10-2018 Patl_4204 373dbc1650e36e3ca1bf586cc9c5fdb2 328 Gene3D G3DSA:1.20.1640.10 127 318 2.1E-10 T 11-10-2018 Patl_4204 373dbc1650e36e3ca1bf586cc9c5fdb2 328 Pfam PF07549 SecD/SecF GG Motif 53 78 2.1E-6 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Patl_4204 373dbc1650e36e3ca1bf586cc9c5fdb2 328 PRINTS PR01755 Bacterial translocase SecF protein signature 57 72 9.0E-25 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Patl_4204 373dbc1650e36e3ca1bf586cc9c5fdb2 328 PRINTS PR01755 Bacterial translocase SecF protein signature 217 235 9.0E-25 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Patl_4204 373dbc1650e36e3ca1bf586cc9c5fdb2 328 PRINTS PR01755 Bacterial translocase SecF protein signature 169 183 9.0E-25 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Patl_4204 373dbc1650e36e3ca1bf586cc9c5fdb2 328 PRINTS PR01755 Bacterial translocase SecF protein signature 249 264 9.0E-25 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Patl_4204 373dbc1650e36e3ca1bf586cc9c5fdb2 328 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 134 298 2.1E-44 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Patl_4204 373dbc1650e36e3ca1bf586cc9c5fdb2 328 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 58 299 1.6E-61 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Patl_4204 373dbc1650e36e3ca1bf586cc9c5fdb2 328 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 32 312 21.406 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Patl_0269 057abac1acf7a5483bcbf643051cf28a 97 PRINTS PR01591 DNA-binding protein FIS signature 8 25 2.9E-16 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Patl_0269 057abac1acf7a5483bcbf643051cf28a 97 PRINTS PR01591 DNA-binding protein FIS signature 41 56 2.9E-16 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Patl_0269 057abac1acf7a5483bcbf643051cf28a 97 PRINTS PR01591 DNA-binding protein FIS signature 25 41 2.9E-16 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Patl_0269 057abac1acf7a5483bcbf643051cf28a 97 PRINTS PR01591 DNA-binding protein FIS signature 56 68 2.9E-16 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Patl_0269 057abac1acf7a5483bcbf643051cf28a 97 Gene3D G3DSA:1.10.10.60 1 97 3.4E-28 T 11-10-2018 Patl_0269 057abac1acf7a5483bcbf643051cf28a 97 PIRSF PIRSF002097 1 97 1.1E-37 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 Patl_0269 057abac1acf7a5483bcbf643051cf28a 97 Pfam PF02954 Bacterial regulatory protein, Fis family 54 94 1.1E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_0269 057abac1acf7a5483bcbf643051cf28a 97 SUPERFAMILY SSF46689 14 97 6.15E-22 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0269 057abac1acf7a5483bcbf643051cf28a 97 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 77 97 4.0E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_0269 057abac1acf7a5483bcbf643051cf28a 97 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 60 77 4.0E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_4233 c18e1db3491c3f588c37c00739a5e8e2 192 Gene3D G3DSA:3.30.300.130 101 189 7.6E-18 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Patl_4233 c18e1db3491c3f588c37c00739a5e8e2 192 Pfam PF01106 NifU-like domain 111 178 5.5E-18 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Patl_4233 c18e1db3491c3f588c37c00739a5e8e2 192 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 118 178 4.0E-29 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Patl_4233 c18e1db3491c3f588c37c00739a5e8e2 192 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 192 1.9E-98 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 Patl_4233 c18e1db3491c3f588c37c00739a5e8e2 192 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 192 44.161 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 Patl_4233 c18e1db3491c3f588c37c00739a5e8e2 192 SUPERFAMILY SSF89360 1 97 1.37E-21 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Patl_4233 c18e1db3491c3f588c37c00739a5e8e2 192 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 2.0E-11 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Patl_4233 c18e1db3491c3f588c37c00739a5e8e2 192 SUPERFAMILY SSF117916 95 184 2.4E-21 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Patl_4233 c18e1db3491c3f588c37c00739a5e8e2 192 Gene3D G3DSA:2.60.300.12 1 98 3.8E-14 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Patl_0165 d73663faad64366c1ad3c8ab4a65a1c0 268 Gene3D G3DSA:3.10.180.50 2 243 1.1E-94 T 11-10-2018 Patl_0165 d73663faad64366c1ad3c8ab4a65a1c0 268 Pfam PF07063 Domain of unknown function (DUF1338) 7 265 1.4E-46 T 11-10-2018 IPR009770 Domain of unknown function DUF1338 Patl_0165 d73663faad64366c1ad3c8ab4a65a1c0 268 SMART SM01150 5 266 6.1E-125 T 11-10-2018 IPR009770 Domain of unknown function DUF1338 Patl_3282 b292bb650d4b7afc88fe266fa6a9f601 405 SUPERFAMILY SSF81891 120 402 1.7E-54 T 11-10-2018 Patl_3282 b292bb650d4b7afc88fe266fa6a9f601 405 PIRSF PIRSF000813 1 405 2.3E-193 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 Patl_3282 b292bb650d4b7afc88fe266fa6a9f601 405 SUPERFAMILY SSF81301 1 119 4.47E-31 T 11-10-2018 Patl_3282 b292bb650d4b7afc88fe266fa6a9f601 405 Pfam PF01743 Poly A polymerase head domain 3 122 6.7E-22 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Patl_3282 b292bb650d4b7afc88fe266fa6a9f601 405 Gene3D G3DSA:3.30.460.10 1 121 9.1E-32 T 11-10-2018 Patl_3282 b292bb650d4b7afc88fe266fa6a9f601 405 Pfam PF01966 HD domain 229 306 5.5E-7 T 11-10-2018 IPR006674 HD domain Patl_3282 b292bb650d4b7afc88fe266fa6a9f601 405 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 405 50.872 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 Patl_3282 b292bb650d4b7afc88fe266fa6a9f601 405 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 211 3.6E-13 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Patl_3282 b292bb650d4b7afc88fe266fa6a9f601 405 Gene3D G3DSA:1.10.3090.10 122 403 1.0E-43 T 11-10-2018 Patl_3282 b292bb650d4b7afc88fe266fa6a9f601 405 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.787 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 Patl_3345 95877039a6324eb9080f9d7af1e08b53 280 PIRSF PIRSF006250 1 280 1.0E-97 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 Patl_3345 95877039a6324eb9080f9d7af1e08b53 280 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 24 111 1.0E-26 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Patl_3345 95877039a6324eb9080f9d7af1e08b53 280 SUPERFAMILY SSF51690 114 277 9.42E-58 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Patl_3345 95877039a6324eb9080f9d7af1e08b53 280 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 114 277 5.9E-59 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Patl_3345 95877039a6324eb9080f9d7af1e08b53 280 Gene3D G3DSA:3.90.1170.20 5 277 1.1E-112 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Patl_3345 95877039a6324eb9080f9d7af1e08b53 280 Gene3D G3DSA:3.20.20.70 122 268 1.1E-112 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_3345 95877039a6324eb9080f9d7af1e08b53 280 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 10 277 9.0E-93 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 Patl_3345 95877039a6324eb9080f9d7af1e08b53 280 SUPERFAMILY SSF54675 1 112 4.32E-30 T 11-10-2018 Patl_4191 75e256117c929f86f4839d2b8cf2fc41 174 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.384 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Patl_4191 75e256117c929f86f4839d2b8cf2fc41 174 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 1.9E-86 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Patl_4191 75e256117c929f86f4839d2b8cf2fc41 174 Pfam PF00227 Proteasome subunit 2 171 1.5E-23 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Patl_4191 75e256117c929f86f4839d2b8cf2fc41 174 Gene3D G3DSA:3.60.20.10 1 173 9.1E-69 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_4191 75e256117c929f86f4839d2b8cf2fc41 174 SUPERFAMILY SSF56235 2 172 3.66E-59 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_4191 75e256117c929f86f4839d2b8cf2fc41 174 PIRSF PIRSF039093 1 174 1.7E-87 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Patl_0292 3078c0ff859c4ea137a221e0e55d44e3 341 SUPERFAMILY SSF47413 3 62 2.82E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_0292 3078c0ff859c4ea137a221e0e55d44e3 341 SMART SM00354 3 74 1.1E-27 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_0292 3078c0ff859c4ea137a221e0e55d44e3 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 9.1E-16 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_0292 3078c0ff859c4ea137a221e0e55d44e3 341 Gene3D G3DSA:1.10.260.40 1 61 2.8E-19 T 11-10-2018 Patl_0292 3078c0ff859c4ea137a221e0e55d44e3 341 Pfam PF13377 Periplasmic binding protein-like domain 171 332 1.5E-27 T 11-10-2018 Patl_0292 3078c0ff859c4ea137a221e0e55d44e3 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 11-10-2018 Patl_0292 3078c0ff859c4ea137a221e0e55d44e3 341 SUPERFAMILY SSF53822 63 337 1.56E-56 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Patl_0292 3078c0ff859c4ea137a221e0e55d44e3 341 Gene3D G3DSA:3.40.50.2300 66 313 5.0E-64 T 11-10-2018 Patl_0292 3078c0ff859c4ea137a221e0e55d44e3 341 Gene3D G3DSA:3.40.50.2300 161 293 5.0E-64 T 11-10-2018 Patl_0917 2339e157890c6f406049fafefa4eca4a 222 Pfam PF08892 YqcI/YcgG family 12 216 6.0E-60 T 11-10-2018 IPR014988 Uncharacterised protein family, YqcI/YcgG Patl_1262 f8341a37de5e32dae4ab1685380ee444 388 Gene3D G3DSA:3.40.50.2000 177 354 8.9E-7 T 11-10-2018 Patl_1262 f8341a37de5e32dae4ab1685380ee444 388 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 5 382 39.88 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Patl_1262 f8341a37de5e32dae4ab1685380ee444 388 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 7 380 3.3E-129 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Patl_1262 f8341a37de5e32dae4ab1685380ee444 388 Pfam PF02684 Lipid-A-disaccharide synthetase 10 377 7.1E-122 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 Patl_1262 f8341a37de5e32dae4ab1685380ee444 388 SUPERFAMILY SSF53756 7 350 9.03E-33 T 11-10-2018 Patl_3482 5b889c53f3a1fe5c1bb4bca09f5f0312 342 Gene3D G3DSA:1.10.40.50 272 341 6.0E-22 T 11-10-2018 Patl_3482 5b889c53f3a1fe5c1bb4bca09f5f0312 342 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 72 329 6.2E-86 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Patl_3482 5b889c53f3a1fe5c1bb4bca09f5f0312 342 Gene3D G3DSA:3.40.50.300 100 271 1.1E-49 T 11-10-2018 Patl_3482 5b889c53f3a1fe5c1bb4bca09f5f0312 342 Pfam PF03193 RsgA GTPase 97 272 4.0E-56 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 Patl_3482 5b889c53f3a1fe5c1bb4bca09f5f0312 342 SUPERFAMILY SSF52540 111 335 2.5E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3482 5b889c53f3a1fe5c1bb4bca09f5f0312 342 Gene3D G3DSA:2.40.50.140 35 99 3.5E-21 T 11-10-2018 Patl_3482 5b889c53f3a1fe5c1bb4bca09f5f0312 342 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 39 336 36.406 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Patl_2718 804772f746a83bf541ff5c0e36b2dc61 298 Gene3D G3DSA:3.20.20.370 1 294 2.8E-76 T 11-10-2018 Patl_2718 804772f746a83bf541ff5c0e36b2dc61 298 SUPERFAMILY SSF88713 3 284 8.62E-68 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Patl_2718 804772f746a83bf541ff5c0e36b2dc61 298 Pfam PF01522 Polysaccharide deacetylase 61 167 5.4E-13 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Patl_2934 3aad276530e76cd035e9492619b89a23 441 Pfam PF07690 Major Facilitator Superfamily 32 380 2.9E-39 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_2934 3aad276530e76cd035e9492619b89a23 441 SUPERFAMILY SSF103473 15 429 1.31E-63 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_2934 3aad276530e76cd035e9492619b89a23 441 Gene3D G3DSA:1.20.1250.20 224 430 5.2E-15 T 11-10-2018 Patl_2934 3aad276530e76cd035e9492619b89a23 441 Gene3D G3DSA:1.20.1250.20 17 216 1.8E-41 T 11-10-2018 Patl_2803 5edff752873554a343d5d72fc91c5896 400 SMART SM00474 13 181 2.1E-37 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Patl_2803 5edff752873554a343d5d72fc91c5896 400 Pfam PF01612 3'-5' exonuclease 13 176 1.9E-38 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Patl_2803 5edff752873554a343d5d72fc91c5896 400 Gene3D G3DSA:3.30.420.10 11 204 9.4E-64 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Patl_2803 5edff752873554a343d5d72fc91c5896 400 SUPERFAMILY SSF53098 9 218 3.04E-65 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_2803 5edff752873554a343d5d72fc91c5896 400 Pfam PF00570 HRDC domain 226 290 3.3E-16 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Patl_2803 5edff752873554a343d5d72fc91c5896 400 Gene3D G3DSA:1.10.150.80 305 387 5.1E-25 T 11-10-2018 Patl_2803 5edff752873554a343d5d72fc91c5896 400 SUPERFAMILY SSF47819 202 310 1.8E-26 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Patl_2803 5edff752873554a343d5d72fc91c5896 400 SUPERFAMILY SSF47819 307 384 9.81E-18 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Patl_2803 5edff752873554a343d5d72fc91c5896 400 TIGRFAM TIGR01388 rnd: ribonuclease D 16 384 2.7E-119 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 Patl_2803 5edff752873554a343d5d72fc91c5896 400 Gene3D G3DSA:1.10.150.80 207 304 2.1E-20 T 11-10-2018 Patl_2803 5edff752873554a343d5d72fc91c5896 400 Hamap MF_01899 Ribonuclease D [rnd]. 13 386 44.247 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 Patl_2803 5edff752873554a343d5d72fc91c5896 400 SMART SM00341 220 300 8.9E-9 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Patl_2795 09cfb6f41ae0cf7892c9c35262c2defe 526 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 526 347.865 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 Patl_2795 09cfb6f41ae0cf7892c9c35262c2defe 526 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 513 2.4E-261 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 Patl_2795 09cfb6f41ae0cf7892c9c35262c2defe 526 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 3 513 3.7E-254 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 Patl_2038 0ea1d3e7b32ec10af0e206b1ef22a0c1 555 Gene3D G3DSA:4.10.320.10 249 296 3.6E-15 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Patl_2038 0ea1d3e7b32ec10af0e206b1ef22a0c1 555 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 322 551 8.0E-83 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Patl_2038 0ea1d3e7b32ec10af0e206b1ef22a0c1 555 Gene3D G3DSA:2.40.50.100 135 211 1.3E-18 T 11-10-2018 Patl_2038 0ea1d3e7b32ec10af0e206b1ef22a0c1 555 Pfam PF02817 e3 binding domain 259 292 1.2E-13 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Patl_2038 0ea1d3e7b32ec10af0e206b1ef22a0c1 555 Gene3D G3DSA:2.40.50.100 1 95 3.7E-21 T 11-10-2018 Patl_2038 0ea1d3e7b32ec10af0e206b1ef22a0c1 555 SUPERFAMILY SSF51230 135 222 4.32E-22 T 11-10-2018 IPR011053 Single hybrid motif Patl_2038 0ea1d3e7b32ec10af0e206b1ef22a0c1 555 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Patl_2038 0ea1d3e7b32ec10af0e206b1ef22a0c1 555 SUPERFAMILY SSF52777 319 551 1.33E-77 T 11-10-2018 Patl_2038 0ea1d3e7b32ec10af0e206b1ef22a0c1 555 Gene3D G3DSA:3.30.559.10 308 551 8.9E-86 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Patl_2038 0ea1d3e7b32ec10af0e206b1ef22a0c1 555 SUPERFAMILY SSF47005 256 295 8.37E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Patl_2038 0ea1d3e7b32ec10af0e206b1ef22a0c1 555 SUPERFAMILY SSF51230 2 84 1.05E-22 T 11-10-2018 IPR011053 Single hybrid motif Patl_2038 0ea1d3e7b32ec10af0e206b1ef22a0c1 555 Pfam PF00364 Biotin-requiring enzyme 3 74 1.2E-16 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Patl_2038 0ea1d3e7b32ec10af0e206b1ef22a0c1 555 Pfam PF00364 Biotin-requiring enzyme 135 206 1.4E-16 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Patl_0714 542a107d8957a4c8ac7da5ce56fd9aa6 387 Pfam PF04865 Baseplate J-like protein 86 311 1.4E-21 T 11-10-2018 IPR006949 Baseplate protein J-like Patl_2570 1d69ba1d3ed24c5559443b11041b2e06 194 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 7.1E-50 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Patl_2570 1d69ba1d3ed24c5559443b11041b2e06 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Patl_2570 1d69ba1d3ed24c5559443b11041b2e06 194 SUPERFAMILY SSF53178 4 192 3.27E-66 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Patl_2570 1d69ba1d3ed24c5559443b11041b2e06 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 190 5.6E-62 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Patl_2570 1d69ba1d3ed24c5559443b11041b2e06 194 Gene3D G3DSA:3.40.50.1470 1 194 7.8E-68 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Patl_2570 1d69ba1d3ed24c5559443b11041b2e06 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 182 32.226 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Patl_2341 520d31f0691c41cc6019a8eb46659d52 1171 SUPERFAMILY SSF63446 1111 1165 1.83E-5 T 11-10-2018 IPR036439 Dockerin domain superfamily GO:0000272 Patl_2341 520d31f0691c41cc6019a8eb46659d52 1171 Gene3D G3DSA:2.60.120.1200 520 641 4.6E-37 T 11-10-2018 Patl_2341 520d31f0691c41cc6019a8eb46659d52 1171 SMART SM00635 648 725 5.9E-13 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 Patl_2341 520d31f0691c41cc6019a8eb46659d52 1171 SUPERFAMILY SSF49373 648 723 7.46E-13 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Patl_2341 520d31f0691c41cc6019a8eb46659d52 1171 SUPERFAMILY SSF51445 37 357 2.04E-18 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_2341 520d31f0691c41cc6019a8eb46659d52 1171 Gene3D G3DSA:2.60.40.1080 647 729 5.7E-19 T 11-10-2018 Patl_2341 520d31f0691c41cc6019a8eb46659d52 1171 Gene3D G3DSA:3.20.20.80 44 418 2.4E-84 T 11-10-2018 Patl_2341 520d31f0691c41cc6019a8eb46659d52 1171 Pfam PF02368 Bacterial Ig-like domain (group 2) 648 722 3.2E-14 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 Patl_3405 b0aec7a6821c2575fd657f430b8c6178 137 Pfam PF07273 Protein of unknown function (DUF1439) 10 128 3.1E-18 T 11-10-2018 IPR010835 Protein of unknown function DUF1439 Patl_3405 b0aec7a6821c2575fd657f430b8c6178 137 Gene3D G3DSA:3.15.10.40 7 137 1.4E-14 T 11-10-2018 Patl_3869 e621b74b2efb40867310c7995945db09 145 SUPERFAMILY SSF53927 2 143 3.51E-39 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Patl_3869 e621b74b2efb40867310c7995945db09 145 Gene3D G3DSA:3.40.140.10 1 145 1.5E-44 T 11-10-2018 Patl_3869 e621b74b2efb40867310c7995945db09 145 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 97 8.0E-23 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Patl_3869 e621b74b2efb40867310c7995945db09 145 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 86 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Patl_2275 866b89f82bb1bf630063d2a4bea00dfa 779 SUPERFAMILY SSF56935 45 779 3.83E-107 T 11-10-2018 Patl_2275 866b89f82bb1bf630063d2a4bea00dfa 779 Pfam PF00593 TonB dependent receptor 259 777 1.4E-31 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_2275 866b89f82bb1bf630063d2a4bea00dfa 779 Gene3D G3DSA:2.170.130.10 68 195 1.3E-34 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_2275 866b89f82bb1bf630063d2a4bea00dfa 779 Pfam PF07715 TonB-dependent Receptor Plug Domain 85 184 1.9E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_2275 866b89f82bb1bf630063d2a4bea00dfa 779 Gene3D G3DSA:2.40.170.20 198 779 3.5E-100 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_2993 4bfe5ecf0f72ecfc12b62b301ba03ab7 966 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 170 2.3E-22 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_2993 4bfe5ecf0f72ecfc12b62b301ba03ab7 966 Pfam PF00593 TonB dependent receptor 370 965 7.8E-41 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_2993 4bfe5ecf0f72ecfc12b62b301ba03ab7 966 Gene3D G3DSA:2.170.130.10 37 174 6.7E-36 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_2993 4bfe5ecf0f72ecfc12b62b301ba03ab7 966 SUPERFAMILY SSF56935 43 966 3.14E-92 T 11-10-2018 Patl_2874 44dd8a74ce987a650196be32a52099f6 457 Gene3D G3DSA:3.90.420.10 83 337 6.2E-66 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Patl_2874 44dd8a74ce987a650196be32a52099f6 457 PRINTS PR00407 Eukaryotic molybdopterin domain signature 104 118 2.0E-16 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Patl_2874 44dd8a74ce987a650196be32a52099f6 457 PRINTS PR00407 Eukaryotic molybdopterin domain signature 291 304 2.0E-16 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Patl_2874 44dd8a74ce987a650196be32a52099f6 457 PRINTS PR00407 Eukaryotic molybdopterin domain signature 378 390 2.0E-16 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Patl_2874 44dd8a74ce987a650196be32a52099f6 457 PRINTS PR00407 Eukaryotic molybdopterin domain signature 124 140 2.0E-16 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Patl_2874 44dd8a74ce987a650196be32a52099f6 457 PRINTS PR00407 Eukaryotic molybdopterin domain signature 275 288 2.0E-16 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Patl_2874 44dd8a74ce987a650196be32a52099f6 457 PRINTS PR00407 Eukaryotic molybdopterin domain signature 339 351 2.0E-16 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Patl_2874 44dd8a74ce987a650196be32a52099f6 457 PRINTS PR00407 Eukaryotic molybdopterin domain signature 179 190 2.0E-16 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Patl_2874 44dd8a74ce987a650196be32a52099f6 457 PRINTS PR00407 Eukaryotic molybdopterin domain signature 437 450 2.0E-16 T 11-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 Patl_2874 44dd8a74ce987a650196be32a52099f6 457 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 338 456 1.9E-17 T 11-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 Patl_2874 44dd8a74ce987a650196be32a52099f6 457 Gene3D G3DSA:2.60.40.650 341 457 9.2E-32 T 11-10-2018 Patl_2874 44dd8a74ce987a650196be32a52099f6 457 SUPERFAMILY SSF81296 342 456 7.7E-32 T 11-10-2018 IPR014756 Immunoglobulin E-set Patl_2874 44dd8a74ce987a650196be32a52099f6 457 Pfam PF00174 Oxidoreductase molybdopterin binding domain 142 310 2.4E-45 T 11-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 Patl_2874 44dd8a74ce987a650196be32a52099f6 457 SUPERFAMILY SSF56524 96 335 1.01E-53 T 11-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Patl_2941 ddbe8018c4c000ac283f7b8f562c55d7 140 Gene3D G3DSA:3.30.420.270 56 128 8.1E-24 T 11-10-2018 Patl_2941 ddbe8018c4c000ac283f7b8f562c55d7 140 TIGRFAM TIGR02801 tolR: protein TolR 10 136 1.6E-44 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 Patl_2941 ddbe8018c4c000ac283f7b8f562c55d7 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 137 5.5E-25 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Patl_2941 ddbe8018c4c000ac283f7b8f562c55d7 140 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 3 136 30.476 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 Patl_1030 9c8fb9f948e222173c85d8cd88385139 239 Pfam PF01553 Acyltransferase 62 177 1.4E-28 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Patl_1030 9c8fb9f948e222173c85d8cd88385139 239 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 178 2.2E-39 T 11-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 Patl_1030 9c8fb9f948e222173c85d8cd88385139 239 SMART SM00563 67 182 2.1E-32 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Patl_1030 9c8fb9f948e222173c85d8cd88385139 239 SUPERFAMILY SSF69593 8 235 3.4E-46 T 11-10-2018 Patl_0920 5e3a7249a221ecaf87bb79b03ecb937a 325 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 1.1E-183 T 11-10-2018 IPR015004 Protein of unknown function DUF1852 Patl_0920 5e3a7249a221ecaf87bb79b03ecb937a 325 PIRSF PIRSF034367 1 325 4.7E-190 T 11-10-2018 IPR015004 Protein of unknown function DUF1852 Patl_3442 0267088804478ea3fcc9fd580def68f4 483 Gene3D G3DSA:3.60.21.10 18 329 2.6E-84 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Patl_3442 0267088804478ea3fcc9fd580def68f4 483 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 31 306 1.9E-66 T 11-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 Patl_3442 0267088804478ea3fcc9fd580def68f4 483 SUPERFAMILY SSF56300 30 368 9.88E-49 T 11-10-2018 Patl_3442 0267088804478ea3fcc9fd580def68f4 483 Pfam PF00149 Calcineurin-like phosphoesterase 30 123 1.6E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Patl_3442 0267088804478ea3fcc9fd580def68f4 483 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 328 453 1.4E-33 T 11-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain Patl_3442 0267088804478ea3fcc9fd580def68f4 483 Gene3D G3DSA:3.30.160.720 368 419 5.5E-15 T 11-10-2018 Patl_3180 4025c1ce89bbbdd4da31b3b26edba944 523 PRINTS PR01806 Virulence factor MviN signature 418 435 1.8E-78 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Patl_3180 4025c1ce89bbbdd4da31b3b26edba944 523 PRINTS PR01806 Virulence factor MviN signature 142 166 1.8E-78 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Patl_3180 4025c1ce89bbbdd4da31b3b26edba944 523 PRINTS PR01806 Virulence factor MviN signature 166 187 1.8E-78 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Patl_3180 4025c1ce89bbbdd4da31b3b26edba944 523 PRINTS PR01806 Virulence factor MviN signature 366 385 1.8E-78 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Patl_3180 4025c1ce89bbbdd4da31b3b26edba944 523 PRINTS PR01806 Virulence factor MviN signature 268 294 1.8E-78 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Patl_3180 4025c1ce89bbbdd4da31b3b26edba944 523 PRINTS PR01806 Virulence factor MviN signature 54 70 1.8E-78 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Patl_3180 4025c1ce89bbbdd4da31b3b26edba944 523 PRINTS PR01806 Virulence factor MviN signature 35 54 1.8E-78 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Patl_3180 4025c1ce89bbbdd4da31b3b26edba944 523 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 20.076 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Patl_3180 4025c1ce89bbbdd4da31b3b26edba944 523 PIRSF PIRSF002869 2 521 1.3E-153 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Patl_3180 4025c1ce89bbbdd4da31b3b26edba944 523 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 505 5.6E-133 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Patl_3180 4025c1ce89bbbdd4da31b3b26edba944 523 Pfam PF03023 MviN-like protein 30 479 8.9E-142 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Patl_2025 c792189dd5f2681773bf00191ff22790 211 SUPERFAMILY SSF161111 13 196 1.07E-33 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Patl_2025 c792189dd5f2681773bf00191ff22790 211 Gene3D G3DSA:1.20.1510.10 15 197 2.8E-10 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Patl_2025 c792189dd5f2681773bf00191ff22790 211 Pfam PF01545 Cation efflux family 23 193 3.9E-14 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Patl_3509 13c53606cdab436147f876c6eba1cf4e 345 SMART SM01358 9 245 7.5E-20 T 11-10-2018 IPR032255 Helical bimodular sensor domain Patl_1558 4e7658b880ae0c10c3c870e32af44d6c 372 Gene3D G3DSA:1.10.8.350 53 219 1.9E-103 T 11-10-2018 Patl_1558 4e7658b880ae0c10c3c870e32af44d6c 372 Gene3D G3DSA:1.10.530.10 86 350 1.9E-103 T 11-10-2018 Patl_1558 4e7658b880ae0c10c3c870e32af44d6c 372 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 49 353 2.3E-108 T 11-10-2018 IPR011757 Lytic transglycosylase MltB Patl_1558 4e7658b880ae0c10c3c870e32af44d6c 372 SUPERFAMILY SSF53955 28 355 1.07E-77 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Patl_1558 4e7658b880ae0c10c3c870e32af44d6c 372 Pfam PF13406 Transglycosylase SLT domain 50 350 1.7E-95 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 Patl_0301 de53ef2e4d8aecba9f0f317ef9a22f67 306 Pfam PF02649 Type I GTP cyclohydrolase folE2 5 294 1.7E-67 T 11-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Patl_0301 de53ef2e4d8aecba9f0f317ef9a22f67 306 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 5 299 32.583 T 11-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 Patl_3196 c61d5616666860e6563512549fc6cda5 585 Gene3D G3DSA:1.10.3210.10 318 572 2.3E-11 T 11-10-2018 Patl_3196 c61d5616666860e6563512549fc6cda5 585 SUPERFAMILY SSF109604 313 578 1.66E-11 T 11-10-2018 Patl_3196 c61d5616666860e6563512549fc6cda5 585 Pfam PF08668 HDOD domain 324 465 7.7E-6 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Patl_3363 194d485e9416e568abcced7ab14314da 338 SMART SM00859 6 121 4.4E-42 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Patl_3363 194d485e9416e568abcced7ab14314da 338 Gene3D G3DSA:3.40.50.720 7 331 6.3E-147 T 11-10-2018 Patl_3363 194d485e9416e568abcced7ab14314da 338 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 334 37.441 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Patl_3363 194d485e9416e568abcced7ab14314da 338 SUPERFAMILY SSF55347 131 321 5.06E-79 T 11-10-2018 Patl_3363 194d485e9416e568abcced7ab14314da 338 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 7 335 4.3E-134 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Patl_3363 194d485e9416e568abcced7ab14314da 338 PIRSF PIRSF000148 4 338 2.0E-136 T 11-10-2018 Patl_3363 194d485e9416e568abcced7ab14314da 338 Gene3D G3DSA:3.30.360.10 130 317 6.3E-147 T 11-10-2018 Patl_3363 194d485e9416e568abcced7ab14314da 338 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 320 4.5E-62 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Patl_3363 194d485e9416e568abcced7ab14314da 338 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 119 6.6E-31 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Patl_3363 194d485e9416e568abcced7ab14314da 338 SUPERFAMILY SSF51735 5 159 9.34E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3251 797182720132d47ffc19c556517e6b02 677 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 6.9E-91 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3251 797182720132d47ffc19c556517e6b02 677 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 6.9E-91 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3251 797182720132d47ffc19c556517e6b02 677 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 6.9E-91 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3251 797182720132d47ffc19c556517e6b02 677 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 6.9E-91 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3251 797182720132d47ffc19c556517e6b02 677 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 6.9E-91 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3251 797182720132d47ffc19c556517e6b02 677 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 6.9E-91 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3251 797182720132d47ffc19c556517e6b02 677 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 6.9E-91 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3251 797182720132d47ffc19c556517e6b02 677 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 6.9E-91 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3251 797182720132d47ffc19c556517e6b02 677 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 54 645 1.1E-237 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3251 797182720132d47ffc19c556517e6b02 677 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 642 8.0E-127 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal Patl_3251 797182720132d47ffc19c556517e6b02 677 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 635 648 2.6E-53 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3251 797182720132d47ffc19c556517e6b02 677 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 2.6E-53 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3251 797182720132d47ffc19c556517e6b02 677 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.6E-53 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3251 797182720132d47ffc19c556517e6b02 677 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.6E-53 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3251 797182720132d47ffc19c556517e6b02 677 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 2.6E-53 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3251 797182720132d47ffc19c556517e6b02 677 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 2.6E-53 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3251 797182720132d47ffc19c556517e6b02 677 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 2.6E-53 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3251 797182720132d47ffc19c556517e6b02 677 Pfam PF01578 Cytochrome C assembly protein 89 297 2.0E-53 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Patl_1810 f58d7bdb18030ebde3cb328f20eef40e 862 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 162 7.3E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1810 f58d7bdb18030ebde3cb328f20eef40e 862 SUPERFAMILY SSF56935 33 862 3.04E-107 T 11-10-2018 Patl_1810 f58d7bdb18030ebde3cb328f20eef40e 862 Pfam PF00593 TonB dependent receptor 307 859 6.7E-37 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3899 e031ee55b4aca136f6f2db32004fd0d1 372 SUPERFAMILY SSF50129 3 197 3.5E-55 T 11-10-2018 IPR011032 GroES-like superfamily Patl_3899 e031ee55b4aca136f6f2db32004fd0d1 372 Gene3D G3DSA:3.40.50.720 178 313 4.7E-123 T 11-10-2018 Patl_3899 e031ee55b4aca136f6f2db32004fd0d1 372 Pfam PF00107 Zinc-binding dehydrogenase 202 327 1.4E-24 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_3899 e031ee55b4aca136f6f2db32004fd0d1 372 Gene3D G3DSA:3.90.180.10 10 364 4.7E-123 T 11-10-2018 Patl_3899 e031ee55b4aca136f6f2db32004fd0d1 372 SUPERFAMILY SSF51735 163 334 1.62E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3899 e031ee55b4aca136f6f2db32004fd0d1 372 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Patl_3899 e031ee55b4aca136f6f2db32004fd0d1 372 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 155 9.0E-23 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_2819 4df0a9cffca802ccd4c8989121e711dc 194 Gene3D G3DSA:2.40.160.10 18 135 2.0E-7 T 11-10-2018 IPR023614 Porin domain superfamily Patl_2819 4df0a9cffca802ccd4c8989121e711dc 194 Pfam PF13505 Outer membrane protein beta-barrel domain 6 175 1.1E-10 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel Patl_2819 4df0a9cffca802ccd4c8989121e711dc 194 SUPERFAMILY SSF56925 27 167 4.16E-12 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Patl_0155 27ab224e3db176379eed827ab032255e 774 SUPERFAMILY SSF56935 30 773 1.43E-111 T 11-10-2018 Patl_0155 27ab224e3db176379eed827ab032255e 774 Gene3D G3DSA:2.40.170.20 39 774 1.2E-137 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_0155 27ab224e3db176379eed827ab032255e 774 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 155 4.0E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0155 27ab224e3db176379eed827ab032255e 774 Pfam PF00593 TonB dependent receptor 266 772 1.6E-27 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0560 5c3595c7a2e50811d744d81345705a14 259 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 4 257 9.8E-95 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria Patl_0560 5c3595c7a2e50811d744d81345705a14 259 Pfam PF02405 Permease MlaE 43 254 6.5E-77 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 Patl_0487 57f5bfb21e08acfbfd87b8ed626156a2 176 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 1 169 7.4E-30 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Patl_0487 57f5bfb21e08acfbfd87b8ed626156a2 176 Pfam PF13563 2'-5' RNA ligase superfamily 14 138 4.4E-8 T 11-10-2018 Patl_0487 57f5bfb21e08acfbfd87b8ed626156a2 176 SUPERFAMILY SSF55144 1 170 6.98E-32 T 11-10-2018 IPR009097 Cyclic phosphodiesterase Patl_0487 57f5bfb21e08acfbfd87b8ed626156a2 176 Gene3D G3DSA:3.90.1140.10 1 170 9.9E-37 T 11-10-2018 Patl_0487 57f5bfb21e08acfbfd87b8ed626156a2 176 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 170 19.559 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Patl_1193 90ad80ab1fd45b6c75ebf6cfa22b3f7e 371 Pfam PF13439 Glycosyltransferase Family 4 12 167 7.0E-21 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Patl_1193 90ad80ab1fd45b6c75ebf6cfa22b3f7e 371 Pfam PF00534 Glycosyl transferases group 1 188 342 8.0E-35 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Patl_1193 90ad80ab1fd45b6c75ebf6cfa22b3f7e 371 Gene3D G3DSA:3.40.50.2000 12 359 9.6E-75 T 11-10-2018 Patl_1193 90ad80ab1fd45b6c75ebf6cfa22b3f7e 371 SUPERFAMILY SSF53756 3 365 7.33E-79 T 11-10-2018 Patl_1193 90ad80ab1fd45b6c75ebf6cfa22b3f7e 371 Gene3D G3DSA:3.40.50.2000 167 349 9.6E-75 T 11-10-2018 Patl_3863 c002a51787f28be6a7d2063010c19e6d 272 Pfam PF01476 LysM domain 50 92 2.0E-13 T 11-10-2018 IPR018392 LysM domain Patl_3863 c002a51787f28be6a7d2063010c19e6d 272 SMART SM00257 49 93 1.0E-10 T 11-10-2018 IPR018392 LysM domain Patl_3863 c002a51787f28be6a7d2063010c19e6d 272 Gene3D G3DSA:2.70.70.10 134 270 8.1E-36 T 11-10-2018 IPR011055 Duplicated hybrid motif Patl_3863 c002a51787f28be6a7d2063010c19e6d 272 Pfam PF01551 Peptidase family M23 172 265 1.5E-28 T 11-10-2018 IPR016047 Peptidase M23 Patl_3863 c002a51787f28be6a7d2063010c19e6d 272 Gene3D G3DSA:3.10.350.10 48 91 1.2E-13 T 11-10-2018 IPR036779 LysM domain superfamily Patl_3863 c002a51787f28be6a7d2063010c19e6d 272 SUPERFAMILY SSF51261 50 269 8.37E-48 T 11-10-2018 IPR011055 Duplicated hybrid motif Patl_1231 69d280069ecc262e4d834b25c1e569e6 313 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 283 1.7E-85 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Patl_1231 69d280069ecc262e4d834b25c1e569e6 313 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 6.8E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Patl_1231 69d280069ecc262e4d834b25c1e569e6 313 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 6.8E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Patl_1231 69d280069ecc262e4d834b25c1e569e6 313 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 6.8E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Patl_1231 69d280069ecc262e4d834b25c1e569e6 313 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 6.8E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Patl_1231 69d280069ecc262e4d834b25c1e569e6 313 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 28.331 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Patl_1231 69d280069ecc262e4d834b25c1e569e6 313 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 116 280 6.4E-55 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Patl_1231 69d280069ecc262e4d834b25c1e569e6 313 Pfam PF07549 SecD/SecF GG Motif 32 56 3.1E-10 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Patl_1231 69d280069ecc262e4d834b25c1e569e6 313 Gene3D G3DSA:1.20.1640.10 107 298 1.7E-13 T 11-10-2018 Patl_1231 69d280069ecc262e4d834b25c1e569e6 313 SUPERFAMILY SSF82866 76 291 1.07E-41 T 11-10-2018 Patl_1231 69d280069ecc262e4d834b25c1e569e6 313 Pfam PF02355 Protein export membrane protein 108 291 1.7E-69 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Patl_0244 8ef6acb6e303421cfcceee780dafff97 256 Gene3D G3DSA:1.10.575.10 20 256 1.6E-63 T 11-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 Patl_0244 8ef6acb6e303421cfcceee780dafff97 256 Pfam PF02265 S1/P1 Nuclease 20 255 8.0E-68 T 11-10-2018 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 Patl_0244 8ef6acb6e303421cfcceee780dafff97 256 SUPERFAMILY SSF48537 20 254 5.23E-57 T 11-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 Patl_3945 492b8fcda2bc98e5b228bd18d08ae1ff 224 Gene3D G3DSA:3.40.50.300 1 224 1.6E-63 T 11-10-2018 Patl_3945 492b8fcda2bc98e5b228bd18d08ae1ff 224 SUPERFAMILY SSF52540 1 220 2.93E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3945 492b8fcda2bc98e5b228bd18d08ae1ff 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_3945 492b8fcda2bc98e5b228bd18d08ae1ff 224 SMART SM00382 27 214 1.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3945 492b8fcda2bc98e5b228bd18d08ae1ff 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.2E-88 T 11-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 Patl_3945 492b8fcda2bc98e5b228bd18d08ae1ff 224 Pfam PF00005 ABC transporter 18 165 1.1E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_2461 efa4063178bd79c6b220c90b5111fe4b 161 SUPERFAMILY SSF46785 8 68 4.73E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2461 efa4063178bd79c6b220c90b5111fe4b 161 ProSitePatterns PS00519 AsnC-type HTH domain signature. 27 53 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Patl_2461 efa4063178bd79c6b220c90b5111fe4b 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 9.7E-20 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_2461 efa4063178bd79c6b220c90b5111fe4b 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 9.7E-20 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_2461 efa4063178bd79c6b220c90b5111fe4b 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 9.7E-20 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_2461 efa4063178bd79c6b220c90b5111fe4b 161 Pfam PF01037 Lrp/AsnC ligand binding domain 75 149 3.1E-20 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Patl_2461 efa4063178bd79c6b220c90b5111fe4b 161 SMART SM00344 9 118 6.4E-47 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Patl_2461 efa4063178bd79c6b220c90b5111fe4b 161 SUPERFAMILY SSF54909 71 156 6.57E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_2461 efa4063178bd79c6b220c90b5111fe4b 161 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 55 4.5E-20 T 11-10-2018 Patl_2461 efa4063178bd79c6b220c90b5111fe4b 161 Gene3D G3DSA:3.30.70.920 61 155 6.3E-24 T 11-10-2018 Patl_2461 efa4063178bd79c6b220c90b5111fe4b 161 Gene3D G3DSA:1.10.10.10 3 60 1.4E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0265 d5d37fa3bb6b29e1f96c6a88d8826a5b 310 Pfam PF00990 Diguanylate cyclase, GGDEF domain 143 307 2.5E-44 T 11-10-2018 IPR000160 GGDEF domain Patl_0265 d5d37fa3bb6b29e1f96c6a88d8826a5b 310 SMART SM00267 130 310 5.6E-42 T 11-10-2018 IPR000160 GGDEF domain Patl_0265 d5d37fa3bb6b29e1f96c6a88d8826a5b 310 Gene3D G3DSA:3.30.70.270 133 309 1.3E-50 T 11-10-2018 Patl_0265 d5d37fa3bb6b29e1f96c6a88d8826a5b 310 SUPERFAMILY SSF55073 146 309 3.53E-42 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_0265 d5d37fa3bb6b29e1f96c6a88d8826a5b 310 SUPERFAMILY SSF52172 11 136 2.93E-15 T 11-10-2018 IPR011006 CheY-like superfamily Patl_0265 d5d37fa3bb6b29e1f96c6a88d8826a5b 310 Pfam PF00072 Response regulator receiver domain 15 121 4.8E-5 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0265 d5d37fa3bb6b29e1f96c6a88d8826a5b 310 Gene3D G3DSA:3.40.50.2300 3 132 2.5E-10 T 11-10-2018 Patl_0265 d5d37fa3bb6b29e1f96c6a88d8826a5b 310 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 139 309 1.1E-47 T 11-10-2018 IPR000160 GGDEF domain Patl_0013 e6696252ff8bae565463ee1312226cb9 229 Gene3D G3DSA:1.10.760.10 134 229 5.6E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_0013 e6696252ff8bae565463ee1312226cb9 229 Pfam PF00034 Cytochrome c 141 227 1.8E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_0013 e6696252ff8bae565463ee1312226cb9 229 Pfam PF00034 Cytochrome c 49 128 8.8E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_0013 e6696252ff8bae565463ee1312226cb9 229 PIRSF PIRSF000005 19 229 3.2E-63 T 11-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 Patl_0013 e6696252ff8bae565463ee1312226cb9 229 SUPERFAMILY SSF46626 138 227 4.65E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_0013 e6696252ff8bae565463ee1312226cb9 229 PRINTS PR00605 Class IC cytochrome C signature 54 65 3.2E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 Patl_0013 e6696252ff8bae565463ee1312226cb9 229 PRINTS PR00605 Class IC cytochrome C signature 103 125 3.2E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 Patl_0013 e6696252ff8bae565463ee1312226cb9 229 SUPERFAMILY SSF46626 27 131 8.4E-21 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_0013 e6696252ff8bae565463ee1312226cb9 229 Gene3D G3DSA:1.10.760.10 43 130 4.8E-24 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_3380 c04628d76be626a5400aac6d4ebc718b 509 Pfam PF11893 Domain of unknown function (DUF3413) 8 256 3.5E-84 T 11-10-2018 IPR024588 Inner membrane protein YejM, N-terminal Patl_3380 c04628d76be626a5400aac6d4ebc718b 509 SUPERFAMILY SSF53649 410 464 1.11E-6 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_1453 0aae299f0c8b9b68789bab4358084b72 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 8 361 1.4E-96 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Patl_1453 0aae299f0c8b9b68789bab4358084b72 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 3 379 5.1E-150 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Patl_1453 0aae299f0c8b9b68789bab4358084b72 379 PIRSF PIRSF000267 3 378 2.8E-115 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Patl_2037 b3c5f4f2cb0ad641e2051b73fd490ab3 325 Gene3D G3DSA:3.40.50.970 1 193 3.4E-88 T 11-10-2018 Patl_2037 b3c5f4f2cb0ad641e2051b73fd490ab3 325 Pfam PF02780 Transketolase, C-terminal domain 195 311 2.8E-38 T 11-10-2018 IPR033248 Transketolase, C-terminal domain Patl_2037 b3c5f4f2cb0ad641e2051b73fd490ab3 325 SUPERFAMILY SSF52922 189 324 4.06E-40 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Patl_2037 b3c5f4f2cb0ad641e2051b73fd490ab3 325 SMART SM00861 4 180 8.6E-68 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Patl_2037 b3c5f4f2cb0ad641e2051b73fd490ab3 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 179 8.4E-52 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Patl_2037 b3c5f4f2cb0ad641e2051b73fd490ab3 325 SUPERFAMILY SSF52518 1 204 3.27E-72 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Patl_2037 b3c5f4f2cb0ad641e2051b73fd490ab3 325 Gene3D G3DSA:3.40.50.920 194 325 6.5E-52 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Patl_1846 3b3f90bd6738400e6bc6035ba9dd998e 402 SUPERFAMILY SSF53098 2 378 2.58E-62 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_1846 3b3f90bd6738400e6bc6035ba9dd998e 402 Pfam PF01609 Transposase DDE domain 91 326 4.7E-19 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Patl_2740 3b3f90bd6738400e6bc6035ba9dd998e 402 SUPERFAMILY SSF53098 2 378 2.58E-62 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_2740 3b3f90bd6738400e6bc6035ba9dd998e 402 Pfam PF01609 Transposase DDE domain 91 326 4.7E-19 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Patl_4122 df7accd6277396ff4d874c6f787536f9 320 Pfam PF00294 pfkB family carbohydrate kinase 2 306 4.6E-67 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB Patl_4122 df7accd6277396ff4d874c6f787536f9 320 SUPERFAMILY SSF53613 1 312 7.79E-78 T 11-10-2018 IPR029056 Ribokinase-like Patl_4122 df7accd6277396ff4d874c6f787536f9 320 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Patl_4122 df7accd6277396ff4d874c6f787536f9 320 Gene3D G3DSA:3.40.1190.20 1 317 2.0E-80 T 11-10-2018 IPR029056 Ribokinase-like Patl_4122 df7accd6277396ff4d874c6f787536f9 320 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 33 57 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Patl_4122 df7accd6277396ff4d874c6f787536f9 320 PRINTS PR00990 Ribokinase signature 28 47 1.0E-4 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Patl_4122 df7accd6277396ff4d874c6f787536f9 320 PRINTS PR00990 Ribokinase signature 221 232 1.0E-4 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Patl_4122 df7accd6277396ff4d874c6f787536f9 320 PRINTS PR00990 Ribokinase signature 182 197 1.0E-4 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Patl_3443 7d7a84947deef81e7538733252dc998a 1232 Gene3D G3DSA:3.40.50.300 1 337 1.1E-45 T 11-10-2018 Patl_3443 7d7a84947deef81e7538733252dc998a 1232 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1119 1186 9.4E-15 T 11-10-2018 Patl_3443 7d7a84947deef81e7538733252dc998a 1232 SUPERFAMILY SSF52540 26 1211 5.16E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3443 7d7a84947deef81e7538733252dc998a 1232 Pfam PF13476 AAA domain 5 233 7.3E-22 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain Patl_3443 7d7a84947deef81e7538733252dc998a 1232 SUPERFAMILY SSF52540 946 1219 1.55E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3443 7d7a84947deef81e7538733252dc998a 1232 Gene3D G3DSA:3.40.50.300 950 1226 4.9E-22 T 11-10-2018 Patl_0030 9f95e495732b30234d4e3e167b3e0390 227 Pfam PF03922 OmpW family 26 227 3.0E-57 T 11-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 Patl_0030 9f95e495732b30234d4e3e167b3e0390 227 Gene3D G3DSA:2.40.160.20 24 227 6.5E-68 T 11-10-2018 Patl_0030 9f95e495732b30234d4e3e167b3e0390 227 SUPERFAMILY SSF56925 25 227 2.46E-28 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Patl_3060 a30e3ec259ff237151dfb5a67279dfe5 406 Pfam PF08484 C-methyltransferase C-terminal domain 244 400 6.8E-58 T 11-10-2018 IPR013691 C-methyltransferase Patl_3060 a30e3ec259ff237151dfb5a67279dfe5 406 Gene3D G3DSA:3.40.50.720 309 406 2.2E-31 T 11-10-2018 Patl_3060 a30e3ec259ff237151dfb5a67279dfe5 406 Pfam PF13489 Methyltransferase domain 83 238 2.0E-11 T 11-10-2018 Patl_3060 a30e3ec259ff237151dfb5a67279dfe5 406 Gene3D G3DSA:3.40.50.150 57 256 8.3E-41 T 11-10-2018 Patl_3060 a30e3ec259ff237151dfb5a67279dfe5 406 Gene3D G3DSA:2.20.25.520 1 54 1.0E-14 T 11-10-2018 IPR038576 Methyltransferase putative zinc binding domain superfamily Patl_3060 a30e3ec259ff237151dfb5a67279dfe5 406 Pfam PF08421 Putative zinc binding domain 3 64 2.2E-22 T 11-10-2018 IPR013630 Methyltransferase putative zinc binding domain Patl_3060 a30e3ec259ff237151dfb5a67279dfe5 406 SUPERFAMILY SSF53335 56 254 5.14E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_1345 471a8ad5fb9251b12b16ee9557d65966 85 SUPERFAMILY SSF89957 1 81 1.57E-18 T 11-10-2018 IPR029756 MTH1187/YkoF-like Patl_1345 471a8ad5fb9251b12b16ee9557d65966 85 Gene3D G3DSA:3.30.70.930 2 78 3.9E-12 T 11-10-2018 IPR029756 MTH1187/YkoF-like Patl_1258 c0d74d5c30400e673130568f8220f660 171 Gene3D G3DSA:3.30.910.20 25 168 1.3E-38 T 11-10-2018 IPR024930 Skp domain superfamily Patl_1258 c0d74d5c30400e673130568f8220f660 171 SMART SM00935 14 168 4.1E-42 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Patl_1258 c0d74d5c30400e673130568f8220f660 171 SUPERFAMILY SSF111384 25 167 1.29E-28 T 11-10-2018 Patl_1258 c0d74d5c30400e673130568f8220f660 171 Pfam PF03938 Outer membrane protein (OmpH-like) 14 166 8.4E-27 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Patl_1258 c0d74d5c30400e673130568f8220f660 171 PIRSF PIRSF002094 1 171 4.4E-55 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 Patl_0117 c1e94598a43d222da62a9bcdfeae0c79 742 SUPERFAMILY SSF48208 282 726 5.1E-28 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Patl_0117 c1e94598a43d222da62a9bcdfeae0c79 742 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 23 741 4.5E-214 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative Patl_0117 c1e94598a43d222da62a9bcdfeae0c79 742 Pfam PF07971 Glycosyl hydrolase family 92 258 738 1.6E-172 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 Patl_0117 c1e94598a43d222da62a9bcdfeae0c79 742 Gene3D G3DSA:2.70.98.10 36 368 2.8E-249 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Patl_0117 c1e94598a43d222da62a9bcdfeae0c79 742 Gene3D G3DSA:1.20.1050.60 369 456 2.8E-249 T 11-10-2018 Patl_0117 c1e94598a43d222da62a9bcdfeae0c79 742 Gene3D G3DSA:1.20.1610.10 457 614 2.8E-249 T 11-10-2018 Patl_0117 c1e94598a43d222da62a9bcdfeae0c79 742 Gene3D G3DSA:3.30.2080.10 317 741 2.8E-249 T 11-10-2018 Patl_1833 90114ea00c49dc0d7a6b0d7b527dbfc0 149 Pfam PF11026 Protein of unknown function (DUF2721) 16 141 6.8E-36 T 11-10-2018 IPR021279 Protein of unknown function DUF2721 Patl_0477 6d4e1b611a2f030a1cdbb120da153fe8 63 SUPERFAMILY SSF46561 1 61 2.62E-22 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0477 6d4e1b611a2f030a1cdbb120da153fe8 63 Pfam PF00831 Ribosomal L29 protein 5 60 2.5E-24 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0477 6d4e1b611a2f030a1cdbb120da153fe8 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.616 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0477 6d4e1b611a2f030a1cdbb120da153fe8 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.8E-22 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0477 6d4e1b611a2f030a1cdbb120da153fe8 63 Gene3D G3DSA:1.10.287.310 1 63 5.3E-29 T 11-10-2018 Patl_3469 f1e0c750163522b43a29a35818690a9b 241 Pfam PF01479 S4 domain 15 56 2.4E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_3469 f1e0c750163522b43a29a35818690a9b 241 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 77 235 1.5E-43 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Patl_3469 f1e0c750163522b43a29a35818690a9b 241 SUPERFAMILY SSF55120 73 235 5.76E-41 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_3469 f1e0c750163522b43a29a35818690a9b 241 Gene3D G3DSA:3.10.290.10 13 71 4.8E-14 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Patl_3469 f1e0c750163522b43a29a35818690a9b 241 Gene3D G3DSA:3.30.70.580 74 236 1.6E-51 T 11-10-2018 Patl_3469 f1e0c750163522b43a29a35818690a9b 241 SMART SM00363 14 70 0.0021 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_3469 f1e0c750163522b43a29a35818690a9b 241 Pfam PF00849 RNA pseudouridylate synthase 73 206 6.3E-17 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_3469 f1e0c750163522b43a29a35818690a9b 241 Gene3D G3DSA:3.30.70.1560 142 223 1.6E-51 T 11-10-2018 Patl_3469 f1e0c750163522b43a29a35818690a9b 241 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 113 127 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Patl_3469 f1e0c750163522b43a29a35818690a9b 241 SUPERFAMILY SSF55174 14 104 1.03E-12 T 11-10-2018 Patl_2862 e081f21f4df0159cbafc5e1d50fb0872 183 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 38 166 3.0E-34 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Patl_0501 424b2cf8738495655b64022ecc096f10 197 Pfam PF01810 LysE type translocator 17 188 1.8E-12 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Patl_1022 7c522fd8b0db6a369cf170a39de09080 509 Gene3D G3DSA:1.10.275.10 4 198 1.2E-64 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal Patl_1022 7c522fd8b0db6a369cf170a39de09080 509 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 140 156 - T 11-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 Patl_1022 7c522fd8b0db6a369cf170a39de09080 509 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 4 504 42.721 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Patl_1022 7c522fd8b0db6a369cf170a39de09080 509 Gene3D G3DSA:1.20.200.10 199 508 7.1E-117 T 11-10-2018 Patl_1022 7c522fd8b0db6a369cf170a39de09080 509 SUPERFAMILY SSF48557 2 498 2.9E-186 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 Patl_1022 7c522fd8b0db6a369cf170a39de09080 509 Pfam PF00221 Aromatic amino acid lyase 12 470 1.0E-179 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 Patl_1022 7c522fd8b0db6a369cf170a39de09080 509 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 7 506 1.7E-208 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Patl_0092 ba92a96eaa2019a34162ab0671aaad99 292 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 291 31.212 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Patl_0092 ba92a96eaa2019a34162ab0671aaad99 292 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 284 9.0E-98 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Patl_0092 ba92a96eaa2019a34162ab0671aaad99 292 SUPERFAMILY SSF53335 52 285 5.43E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_0092 ba92a96eaa2019a34162ab0671aaad99 292 PIRSF PIRSF000401 1 292 4.3E-91 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 Patl_0092 ba92a96eaa2019a34162ab0671aaad99 292 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 3.3E-95 T 11-10-2018 Patl_0092 ba92a96eaa2019a34162ab0671aaad99 292 Gene3D G3DSA:3.40.50.150 101 292 2.3E-53 T 11-10-2018 Patl_2951 b1b2b56a232237d934d489e94351a0cf 260 SMART SM00382 46 229 4.4E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2951 b1b2b56a232237d934d489e94351a0cf 260 SUPERFAMILY SSF52540 39 238 7.07E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2951 b1b2b56a232237d934d489e94351a0cf 260 Gene3D G3DSA:3.40.50.300 14 251 3.2E-63 T 11-10-2018 Patl_2951 b1b2b56a232237d934d489e94351a0cf 260 Pfam PF00005 ABC transporter 39 180 6.5E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1889 f31cc31a7349150dd93474dd34f152fb 454 Pfam PF02661 Fic/DOC family 186 296 2.0E-20 T 11-10-2018 IPR003812 Fido domain Patl_1889 f31cc31a7349150dd93474dd34f152fb 454 SUPERFAMILY SSF140931 167 361 3.79E-27 T 11-10-2018 IPR036597 Fido-like domain superfamily Patl_1889 f31cc31a7349150dd93474dd34f152fb 454 Gene3D G3DSA:1.10.3290.10 110 366 9.4E-47 T 11-10-2018 IPR036597 Fido-like domain superfamily Patl_1495 db7b89785e2e46c3b8df816298dbb8ff 322 Gene3D G3DSA:3.60.15.10 61 260 1.1E-24 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_1495 db7b89785e2e46c3b8df816298dbb8ff 322 SMART SM00849 81 249 1.2E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_1495 db7b89785e2e46c3b8df816298dbb8ff 322 Pfam PF00753 Metallo-beta-lactamase superfamily 79 223 1.4E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_1495 db7b89785e2e46c3b8df816298dbb8ff 322 SUPERFAMILY SSF56281 83 262 9.1E-26 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_2849 b0b16a8e24f8b65a8c771a182ad3f275 318 SUPERFAMILY SSF56281 47 317 6.63E-41 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_2849 b0b16a8e24f8b65a8c771a182ad3f275 318 Pfam PF00753 Metallo-beta-lactamase superfamily 60 239 4.4E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_2849 b0b16a8e24f8b65a8c771a182ad3f275 318 Gene3D G3DSA:3.60.15.10 39 318 2.2E-44 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_2849 b0b16a8e24f8b65a8c771a182ad3f275 318 SMART SM00849 62 285 3.4E-5 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_0334 8fbf65ebfd6cd08c0dc1627eb5e06f6f 815 Gene3D G3DSA:2.170.130.10 29 163 6.0E-21 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_0334 8fbf65ebfd6cd08c0dc1627eb5e06f6f 815 SUPERFAMILY SSF56935 27 815 1.79E-84 T 11-10-2018 Patl_0334 8fbf65ebfd6cd08c0dc1627eb5e06f6f 815 Gene3D G3DSA:2.40.170.20 172 815 5.4E-56 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_0334 8fbf65ebfd6cd08c0dc1627eb5e06f6f 815 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 158 2.2E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0441 e65a93a019233f06cb4acf382362c3b1 189 Gene3D G3DSA:2.30.30.30 1 65 2.9E-27 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Patl_0441 e65a93a019233f06cb4acf382362c3b1 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 7.1E-25 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like Patl_0441 e65a93a019233f06cb4acf382362c3b1 189 SUPERFAMILY SSF50249 69 128 2.4E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_0441 e65a93a019233f06cb4acf382362c3b1 189 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.514 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Patl_0441 e65a93a019233f06cb4acf382362c3b1 189 SMART SM01185 69 123 5.8E-25 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Patl_0441 e65a93a019233f06cb4acf382362c3b1 189 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.3E-25 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Patl_0441 e65a93a019233f06cb4acf382362c3b1 189 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Patl_0441 e65a93a019233f06cb4acf382362c3b1 189 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 1.1E-77 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Patl_0441 e65a93a019233f06cb4acf382362c3b1 189 SUPERFAMILY SSF50249 130 187 4.97E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_0441 e65a93a019233f06cb4acf382362c3b1 189 SMART SM00841 131 186 1.8E-31 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Patl_0441 e65a93a019233f06cb4acf382362c3b1 189 SUPERFAMILY SSF50104 2 63 5.01E-20 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Patl_0441 e65a93a019233f06cb4acf382362c3b1 189 Gene3D G3DSA:2.40.50.140 130 188 4.6E-27 T 11-10-2018 Patl_0441 e65a93a019233f06cb4acf382362c3b1 189 Gene3D G3DSA:2.40.50.140 66 127 3.5E-28 T 11-10-2018 Patl_0441 e65a93a019233f06cb4acf382362c3b1 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.3E-21 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Patl_0441 e65a93a019233f06cb4acf382362c3b1 189 PIRSF PIRSF005901 2 188 1.0E-63 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP Patl_3390 19db416f40e9ffed5785f68da8111830 154 Pfam PF13279 Thioesterase-like superfamily 24 142 1.0E-7 T 11-10-2018 Patl_3390 19db416f40e9ffed5785f68da8111830 154 Gene3D G3DSA:3.10.129.10 12 145 2.6E-28 T 11-10-2018 Patl_3390 19db416f40e9ffed5785f68da8111830 154 SUPERFAMILY SSF54637 10 145 2.75E-32 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_0951 0f1bc6ff810f4616eb77a206ed775837 306 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 10 301 7.3E-120 T 11-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 Patl_0951 0f1bc6ff810f4616eb77a206ed775837 306 SUPERFAMILY SSF51735 6 172 2.91E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0951 0f1bc6ff810f4616eb77a206ed775837 306 PIRSF PIRSF000103 2 306 2.3E-79 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 Patl_0951 0f1bc6ff810f4616eb77a206ed775837 306 SUPERFAMILY SSF48179 173 301 2.49E-39 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_0951 0f1bc6ff810f4616eb77a206ed775837 306 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 171 9.9E-51 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Patl_0951 0f1bc6ff810f4616eb77a206ed775837 306 Gene3D G3DSA:3.40.50.720 4 173 1.9E-53 T 11-10-2018 Patl_0951 0f1bc6ff810f4616eb77a206ed775837 306 Gene3D G3DSA:1.10.1040.10 174 305 2.5E-43 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Patl_0951 0f1bc6ff810f4616eb77a206ed775837 306 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 174 300 1.2E-33 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 Patl_0951 0f1bc6ff810f4616eb77a206ed775837 306 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 10 23 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 Patl_0722 de8186fc099f5569840f717b41771b31 321 SUPERFAMILY SSF69255 20 112 3.66E-12 T 11-10-2018 Patl_0722 de8186fc099f5569840f717b41771b31 321 SUPERFAMILY SSF69349 102 243 4.39E-7 T 11-10-2018 Patl_4024 40ec580b98ac1d4acedc974bcbad91a2 285 SUPERFAMILY SSF56752 3 283 3.53E-70 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Patl_4024 40ec580b98ac1d4acedc974bcbad91a2 285 Gene3D G3DSA:3.30.470.10 1 117 1.7E-32 T 11-10-2018 Patl_4024 40ec580b98ac1d4acedc974bcbad91a2 285 Gene3D G3DSA:3.20.10.10 121 284 3.8E-46 T 11-10-2018 Patl_4024 40ec580b98ac1d4acedc974bcbad91a2 285 ProSitePatterns PS00770 Aminotransferases class-IV signature. 182 211 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Patl_4024 40ec580b98ac1d4acedc974bcbad91a2 285 Pfam PF01063 Amino-transferase class IV 30 255 6.5E-50 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Patl_0567 f76439ba597682f300b7a0ff4efa6a16 241 Gene3D G3DSA:3.40.50.300 2 241 1.1E-70 T 11-10-2018 Patl_0567 f76439ba597682f300b7a0ff4efa6a16 241 Pfam PF00005 ABC transporter 20 166 3.4E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_0567 f76439ba597682f300b7a0ff4efa6a16 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 2.1E-122 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 Patl_0567 f76439ba597682f300b7a0ff4efa6a16 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_0567 f76439ba597682f300b7a0ff4efa6a16 241 SUPERFAMILY SSF52540 4 237 3.51E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0567 f76439ba597682f300b7a0ff4efa6a16 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 6.2E-8 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Patl_0567 f76439ba597682f300b7a0ff4efa6a16 241 SMART SM00382 28 231 3.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3922 827c68cbbfdb37ad2a78068f559b7b3c 701 Pfam PF13768 von Willebrand factor type A domain 304 463 1.4E-21 T 11-10-2018 IPR002035 von Willebrand factor, type A Patl_3922 827c68cbbfdb37ad2a78068f559b7b3c 701 Pfam PF08487 Vault protein inter-alpha-trypsin domain 28 137 3.0E-32 T 11-10-2018 IPR013694 VIT domain Patl_3922 827c68cbbfdb37ad2a78068f559b7b3c 701 TIGRFAM TIGR03788 marine_srt_targ: marine proteobacterial sortase target protein 28 696 3.1E-262 T 11-10-2018 IPR022440 Conserved hypothetical protein CHP03788 Patl_3922 827c68cbbfdb37ad2a78068f559b7b3c 701 SMART SM00327 302 477 3.8E-16 T 11-10-2018 IPR002035 von Willebrand factor, type A Patl_3922 827c68cbbfdb37ad2a78068f559b7b3c 701 SMART SM00609 16 139 3.2E-6 T 11-10-2018 IPR013694 VIT domain Patl_3922 827c68cbbfdb37ad2a78068f559b7b3c 701 Gene3D G3DSA:3.40.50.410 302 483 4.5E-35 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Patl_3922 827c68cbbfdb37ad2a78068f559b7b3c 701 SUPERFAMILY SSF53300 301 483 1.81E-27 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Patl_1667 f342db2a826e965482bfec8d789e7ad8 157 SUPERFAMILY SSF53254 2 147 2.63E-18 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Patl_1667 f342db2a826e965482bfec8d789e7ad8 157 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 142 1.7E-27 T 11-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 Patl_1667 f342db2a826e965482bfec8d789e7ad8 157 SMART SM00855 2 118 6.6E-7 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Patl_1667 f342db2a826e965482bfec8d789e7ad8 157 Gene3D G3DSA:3.40.50.1240 1 157 1.9E-29 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Patl_1667 f342db2a826e965482bfec8d789e7ad8 157 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 71 1.3E-9 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Patl_1000 d8dbb50b54e64b314124eb8e9879b8ac 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1000 d8dbb50b54e64b314124eb8e9879b8ac 104 Gene3D G3DSA:2.30.30.30 2 104 3.2E-39 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 Patl_1000 d8dbb50b54e64b314124eb8e9879b8ac 104 SMART SM00739 4 31 1.1E-4 T 11-10-2018 IPR005824 KOW Patl_1000 d8dbb50b54e64b314124eb8e9879b8ac 104 SUPERFAMILY SSF50104 4 102 3.57E-35 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Patl_1000 d8dbb50b54e64b314124eb8e9879b8ac 104 Pfam PF00467 KOW motif 8 38 1.1E-5 T 11-10-2018 IPR005824 KOW Patl_1000 d8dbb50b54e64b314124eb8e9879b8ac 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 4.2E-40 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1000 d8dbb50b54e64b314124eb8e9879b8ac 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 98 21.551 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1000 d8dbb50b54e64b314124eb8e9879b8ac 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 102 1.3E-25 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2447 096b55fdef1a9087b2ed6ed72283b75a 106 ProSitePatterns PS00290 Immunoglobulins and major histocompatibility complex proteins signature. 42 48 - T 11-10-2018 IPR003006 Immunoglobulin/major histocompatibility complex, conserved site Patl_1243 421bda0d58a549a933f9b5753db2d5e3 112 PRINTS PR00355 Adrenodoxin signature 42 52 6.4E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Patl_1243 421bda0d58a549a933f9b5753db2d5e3 112 PRINTS PR00355 Adrenodoxin signature 60 74 6.4E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Patl_1243 421bda0d58a549a933f9b5753db2d5e3 112 PRINTS PR00355 Adrenodoxin signature 83 91 6.4E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Patl_1243 421bda0d58a549a933f9b5753db2d5e3 112 Gene3D G3DSA:3.10.20.30 1 112 6.8E-35 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_1243 421bda0d58a549a933f9b5753db2d5e3 112 SUPERFAMILY SSF54292 4 105 1.28E-32 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Patl_1243 421bda0d58a549a933f9b5753db2d5e3 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Patl_1243 421bda0d58a549a933f9b5753db2d5e3 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 3.8E-57 T 11-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 Patl_1243 421bda0d58a549a933f9b5753db2d5e3 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 4.5E-15 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Patl_4017 1f2cc4133573aa0033bfacdc1e3cdc36 255 Pfam PF05742 Transport and Golgi organisation 2 1 239 3.2E-77 T 11-10-2018 IPR008551 Transport and Golgi organisation protein 2 Patl_2054 7962497444b187272259d2806d91096c 528 Gene3D G3DSA:3.60.20.40 339 523 2.0E-55 T 11-10-2018 Patl_2054 7962497444b187272259d2806d91096c 528 Gene3D G3DSA:1.10.246.130 234 338 1.1E-12 T 11-10-2018 Patl_2054 7962497444b187272259d2806d91096c 528 SUPERFAMILY SSF56235 6 522 8.95E-135 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_2054 7962497444b187272259d2806d91096c 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 218 234 5.2E-24 T 11-10-2018 Patl_2054 7962497444b187272259d2806d91096c 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 393 408 5.2E-24 T 11-10-2018 Patl_2054 7962497444b187272259d2806d91096c 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 362 380 5.2E-24 T 11-10-2018 Patl_2054 7962497444b187272259d2806d91096c 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 121 140 5.2E-24 T 11-10-2018 Patl_2054 7962497444b187272259d2806d91096c 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 30 55 5.2E-24 T 11-10-2018 Patl_2054 7962497444b187272259d2806d91096c 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 247 266 5.2E-24 T 11-10-2018 Patl_2054 7962497444b187272259d2806d91096c 528 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 338 356 5.2E-24 T 11-10-2018 Patl_2054 7962497444b187272259d2806d91096c 528 Pfam PF01019 Gamma-glutamyltranspeptidase 23 519 5.0E-118 T 11-10-2018 Patl_1395 cae3d93ca9f56d52d72ec724c6fb0e07 193 PIRSF PIRSF000349 1 193 8.6E-82 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Patl_1395 cae3d93ca9f56d52d72ec724c6fb0e07 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Patl_1395 cae3d93ca9f56d52d72ec724c6fb0e07 193 SUPERFAMILY SSF54719 84 192 1.83E-40 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Patl_1395 cae3d93ca9f56d52d72ec724c6fb0e07 193 Gene3D G3DSA:1.10.287.990 20 82 1.1E-25 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Patl_1395 cae3d93ca9f56d52d72ec724c6fb0e07 193 SUPERFAMILY SSF46609 1 84 1.1E-35 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Patl_1395 cae3d93ca9f56d52d72ec724c6fb0e07 193 Gene3D G3DSA:2.40.500.20 83 193 1.9E-39 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Patl_1395 cae3d93ca9f56d52d72ec724c6fb0e07 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 4.7E-35 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Patl_1395 cae3d93ca9f56d52d72ec724c6fb0e07 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 2.8E-34 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Patl_1395 cae3d93ca9f56d52d72ec724c6fb0e07 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.1E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Patl_1395 cae3d93ca9f56d52d72ec724c6fb0e07 193 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 4.1E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Patl_1395 cae3d93ca9f56d52d72ec724c6fb0e07 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 4.1E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Patl_1395 cae3d93ca9f56d52d72ec724c6fb0e07 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.1E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Patl_1395 cae3d93ca9f56d52d72ec724c6fb0e07 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 4.1E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Patl_2412 f8dd4546877337b0813507b91b16df7d 245 Pfam PF04402 Protein of unknown function (DUF541) 47 219 4.1E-15 T 11-10-2018 IPR007497 Protein of unknown function DUF541 Patl_2412 f8dd4546877337b0813507b91b16df7d 245 Gene3D G3DSA:3.30.110.170 49 217 1.2E-9 T 11-10-2018 Patl_2412 f8dd4546877337b0813507b91b16df7d 245 Gene3D G3DSA:3.30.70.2970 59 175 1.2E-9 T 11-10-2018 Patl_2412 f8dd4546877337b0813507b91b16df7d 245 PIRSF PIRSF029033 2 245 1.4E-100 T 11-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein Patl_1701 b9fe919081ad16694461fd5959913a1a 598 Pfam PF00005 ABC transporter 371 520 1.9E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1701 b9fe919081ad16694461fd5959913a1a 598 SMART SM00382 380 566 6.2E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1701 b9fe919081ad16694461fd5959913a1a 598 SUPERFAMILY SSF52540 344 590 1.2E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1701 b9fe919081ad16694461fd5959913a1a 598 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_1701 b9fe919081ad16694461fd5959913a1a 598 Pfam PF00664 ABC transporter transmembrane region 33 309 1.4E-44 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Patl_1701 b9fe919081ad16694461fd5959913a1a 598 Gene3D G3DSA:3.40.50.300 345 598 2.8E-92 T 11-10-2018 Patl_1701 b9fe919081ad16694461fd5959913a1a 598 SUPERFAMILY SSF90123 20 337 3.4E-64 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Patl_1701 b9fe919081ad16694461fd5959913a1a 598 Gene3D G3DSA:1.20.1560.10 22 344 1.3E-110 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Patl_1475 9f79fc307954b740c9a6b0259052a2c3 645 SUPERFAMILY SSF69318 55 318 4.32E-32 T 11-10-2018 Patl_1475 9f79fc307954b740c9a6b0259052a2c3 645 Pfam PF07593 ASPIC and UnbV 573 639 3.1E-16 T 11-10-2018 IPR011519 ASPIC/UnbV Patl_1475 9f79fc307954b740c9a6b0259052a2c3 645 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 134 177 2.9E-7 T 11-10-2018 Patl_1475 9f79fc307954b740c9a6b0259052a2c3 645 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 224 288 9.5E-11 T 11-10-2018 Patl_1475 9f79fc307954b740c9a6b0259052a2c3 645 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 435 477 3.4E-7 T 11-10-2018 Patl_1475 9f79fc307954b740c9a6b0259052a2c3 645 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 62 121 2.1E-7 T 11-10-2018 Patl_1475 9f79fc307954b740c9a6b0259052a2c3 645 SUPERFAMILY SSF69318 432 553 4.84E-11 T 11-10-2018 Patl_4172 96ed2aef1587e0d4d4b7bbff35108290 388 Pfam PF05684 Protein of unknown function (DUF819) 12 382 3.5E-100 T 11-10-2018 IPR008537 Protein of unknown function DUF819 Patl_2126 336a4cc9ab5b7c4cf912080be9f0eb2b 56 SUPERFAMILY SSF57829 2 55 8.55E-19 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Patl_2126 336a4cc9ab5b7c4cf912080be9f0eb2b 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 6.0E-20 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2126 336a4cc9ab5b7c4cf912080be9f0eb2b 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.911 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2126 336a4cc9ab5b7c4cf912080be9f0eb2b 56 Pfam PF01783 Ribosomal L32p protein family 2 54 1.8E-19 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3976 b9d7062f9efcf85e0df0f3e31325fc51 639 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 6 636 22.294 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 Patl_3976 b9d7062f9efcf85e0df0f3e31325fc51 639 SMART SM01340 217 335 3.5E-46 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Patl_3976 b9d7062f9efcf85e0df0f3e31325fc51 639 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 7 315 4.6E-95 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 Patl_3976 b9d7062f9efcf85e0df0f3e31325fc51 639 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 219 331 2.1E-34 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Patl_3976 b9d7062f9efcf85e0df0f3e31325fc51 639 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 98 104 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site Patl_3976 b9d7062f9efcf85e0df0f3e31325fc51 639 Gene3D G3DSA:3.30.565.10 7 221 4.5E-67 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3976 b9d7062f9efcf85e0df0f3e31325fc51 639 SUPERFAMILY SSF55874 6 206 9.56E-52 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3976 b9d7062f9efcf85e0df0f3e31325fc51 639 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 128 3.4E-13 T 11-10-2018 Patl_3976 b9d7062f9efcf85e0df0f3e31325fc51 639 SUPERFAMILY SSF54211 197 332 5.31E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_3976 b9d7062f9efcf85e0df0f3e31325fc51 639 Gene3D G3DSA:3.30.1370.100 507 593 1.8E-9 T 11-10-2018 Patl_3976 b9d7062f9efcf85e0df0f3e31325fc51 639 Pfam PF08676 MutL C terminal dimerisation domain 494 592 1.3E-6 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Patl_3976 b9d7062f9efcf85e0df0f3e31325fc51 639 SUPERFAMILY SSF118116 498 627 3.14E-16 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily Patl_3976 b9d7062f9efcf85e0df0f3e31325fc51 639 Gene3D G3DSA:3.30.230.10 222 333 9.2E-36 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Patl_1032 1e4976c2fefb1d51967dbb55a65e850d 245 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 221 239 0.0045 T 11-10-2018 IPR020008 GlyGly-CTERM domain Patl_3037 edf9f51c866079647751df63a9b12080 251 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 50 247 5.4E-83 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Patl_3037 edf9f51c866079647751df63a9b12080 251 Pfam PF00813 FliP family 50 243 8.6E-79 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Patl_3037 edf9f51c866079647751df63a9b12080 251 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 176 191 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Patl_3037 edf9f51c866079647751df63a9b12080 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 197 218 1.3E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Patl_3037 edf9f51c866079647751df63a9b12080 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 221 246 1.3E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Patl_3037 edf9f51c866079647751df63a9b12080 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 48 67 1.3E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Patl_3037 edf9f51c866079647751df63a9b12080 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 176 196 1.3E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Patl_3037 edf9f51c866079647751df63a9b12080 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 67 87 1.3E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Patl_3037 edf9f51c866079647751df63a9b12080 251 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 87 106 1.3E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Patl_3037 edf9f51c866079647751df63a9b12080 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 46 55 2.5E-19 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Patl_3037 edf9f51c866079647751df63a9b12080 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 106 118 2.5E-19 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Patl_3037 edf9f51c866079647751df63a9b12080 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 146 158 2.5E-19 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Patl_3037 edf9f51c866079647751df63a9b12080 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 118 132 2.5E-19 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Patl_3037 edf9f51c866079647751df63a9b12080 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 237 247 2.5E-19 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Patl_3037 edf9f51c866079647751df63a9b12080 251 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 169 181 2.5E-19 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Patl_3037 edf9f51c866079647751df63a9b12080 251 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 224 236 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Patl_1128 8a9ea3bbec8b7a84e76a29cb5e300848 206 Gene3D G3DSA:3.40.30.10 1 81 2.0E-23 T 11-10-2018 Patl_1128 8a9ea3bbec8b7a84e76a29cb5e300848 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 78 2.7E-14 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Patl_1128 8a9ea3bbec8b7a84e76a29cb5e300848 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 190 1.0E-8 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal Patl_1128 8a9ea3bbec8b7a84e76a29cb5e300848 206 Gene3D G3DSA:1.20.1050.10 86 195 3.3E-22 T 11-10-2018 Patl_1128 8a9ea3bbec8b7a84e76a29cb5e300848 206 SUPERFAMILY SSF47616 75 197 1.95E-25 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Patl_1128 8a9ea3bbec8b7a84e76a29cb5e300848 206 SUPERFAMILY SSF52833 4 82 1.62E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_1198 6989188e7d1a726f1011d34ff39fd902 318 Pfam PF00535 Glycosyl transferase family 2 4 161 4.4E-14 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Patl_1198 6989188e7d1a726f1011d34ff39fd902 318 Gene3D G3DSA:3.90.550.10 1 204 9.5E-29 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_1198 6989188e7d1a726f1011d34ff39fd902 318 SUPERFAMILY SSF53448 3 265 3.94E-37 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_0461 029ada33209dd83baaa28781453e99df 77 Gene3D G3DSA:2.30.30.320 3 77 5.0E-30 T 11-10-2018 IPR037135 DUF1653-like domain superfamily Patl_0461 029ada33209dd83baaa28781453e99df 77 Pfam PF07866 Protein of unknown function (DUF1653) 13 72 2.5E-29 T 11-10-2018 IPR023387 DUF1653-like domain Patl_0529 31353ecd8be3984e66d6713f12d17099 224 SMART SM00479 28 201 2.7E-6 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Patl_0529 31353ecd8be3984e66d6713f12d17099 224 Pfam PF00929 Exonuclease 31 192 8.6E-12 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Patl_0529 31353ecd8be3984e66d6713f12d17099 224 SUPERFAMILY SSF53098 19 201 9.62E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_0529 31353ecd8be3984e66d6713f12d17099 224 Gene3D G3DSA:3.30.420.10 25 204 9.1E-26 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Patl_1998 76f75078a5f2529f60c0e4aff178febc 688 Pfam PF06980 Protein of unknown function (DUF1302) 34 687 4.1E-191 T 11-10-2018 IPR010727 Protein of unknown function DUF1302 Patl_1577 2792dcb8e5f801277df774dc80559235 83 Gene3D G3DSA:3.30.1320.10 1 82 6.9E-31 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1577 2792dcb8e5f801277df774dc80559235 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.118 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1577 2792dcb8e5f801277df774dc80559235 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 8.0E-29 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1577 2792dcb8e5f801277df774dc80559235 83 Pfam PF00886 Ribosomal protein S16 8 68 6.8E-24 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1577 2792dcb8e5f801277df774dc80559235 83 SUPERFAMILY SSF54565 1 76 8.11E-29 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1886 ef88d56cd7448bd91776a4ef12da021e 246 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 6 205 3.2E-8 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Patl_1886 ef88d56cd7448bd91776a4ef12da021e 246 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 242 121.636 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 Patl_1886 ef88d56cd7448bd91776a4ef12da021e 246 Gene3D G3DSA:3.60.21.10 4 234 4.1E-16 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Patl_1886 ef88d56cd7448bd91776a4ef12da021e 246 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 233 1.1E-102 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 Patl_1886 ef88d56cd7448bd91776a4ef12da021e 246 SUPERFAMILY SSF56300 5 221 1.29E-28 T 11-10-2018 Patl_1706 afb25b8dcd9ed8caac615168cdd5ec11 163 Gene3D G3DSA:3.40.50.2300 10 162 1.6E-59 T 11-10-2018 Patl_1706 afb25b8dcd9ed8caac615168cdd5ec11 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 88 103 3.8E-25 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Patl_1706 afb25b8dcd9ed8caac615168cdd5ec11 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 129 144 3.8E-25 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Patl_1706 afb25b8dcd9ed8caac615168cdd5ec11 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 13 30 3.8E-25 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Patl_1706 afb25b8dcd9ed8caac615168cdd5ec11 163 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 54 70 3.8E-25 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Patl_1706 afb25b8dcd9ed8caac615168cdd5ec11 163 SUPERFAMILY SSF52788 9 158 6.28E-52 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Patl_1706 afb25b8dcd9ed8caac615168cdd5ec11 163 SMART SM00226 11 157 1.2E-45 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Patl_1706 afb25b8dcd9ed8caac615168cdd5ec11 163 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 13 155 8.5E-41 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Patl_2638 131bfef6318c24b4cd96c2d177f3263d 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 68 5.4E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_2638 131bfef6318c24b4cd96c2d177f3263d 210 SUPERFAMILY SSF48498 96 209 1.94E-23 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Patl_2638 131bfef6318c24b4cd96c2d177f3263d 210 Pfam PF16925 Bacterial transcriptional repressor C-terminal 95 208 3.3E-47 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Patl_2638 131bfef6318c24b4cd96c2d177f3263d 210 Gene3D G3DSA:1.10.357.10 23 209 6.0E-58 T 11-10-2018 Patl_2638 131bfef6318c24b4cd96c2d177f3263d 210 SUPERFAMILY SSF46689 14 83 4.98E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_2712 4b90f8408408e8d6670e8e1c1988520e 354 Pfam PF06206 CpeT/CpcT family (DUF1001) 51 239 8.2E-49 T 11-10-2018 IPR010404 Chromophore lyase CpcT/CpeT GO:0016829|GO:0017009 Patl_2712 4b90f8408408e8d6670e8e1c1988520e 354 Gene3D G3DSA:2.40.128.590 44 243 5.2E-46 T 11-10-2018 IPR038672 Chromophore lyase CpcT/CpeT superfamily Patl_3726 fd026ea7e59a9964ea26ca5b48709107 439 SUPERFAMILY SSF51658 3 438 5.22E-170 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily Patl_3726 fd026ea7e59a9964ea26ca5b48709107 439 PRINTS PR00688 Xylose isomerase signature 156 175 3.2E-84 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Patl_3726 fd026ea7e59a9964ea26ca5b48709107 439 PRINTS PR00688 Xylose isomerase signature 133 153 3.2E-84 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Patl_3726 fd026ea7e59a9964ea26ca5b48709107 439 PRINTS PR00688 Xylose isomerase signature 333 344 3.2E-84 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Patl_3726 fd026ea7e59a9964ea26ca5b48709107 439 PRINTS PR00688 Xylose isomerase signature 180 201 3.2E-84 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Patl_3726 fd026ea7e59a9964ea26ca5b48709107 439 PRINTS PR00688 Xylose isomerase signature 271 298 3.2E-84 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Patl_3726 fd026ea7e59a9964ea26ca5b48709107 439 PRINTS PR00688 Xylose isomerase signature 229 253 3.2E-84 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Patl_3726 fd026ea7e59a9964ea26ca5b48709107 439 PRINTS PR00688 Xylose isomerase signature 92 114 3.2E-84 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Patl_3726 fd026ea7e59a9964ea26ca5b48709107 439 PRINTS PR00688 Xylose isomerase signature 207 226 3.2E-84 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Patl_3726 fd026ea7e59a9964ea26ca5b48709107 439 PRINTS PR00688 Xylose isomerase signature 300 311 3.2E-84 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Patl_3726 fd026ea7e59a9964ea26ca5b48709107 439 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 51.915 T 11-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Patl_3726 fd026ea7e59a9964ea26ca5b48709107 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 2.6E-207 T 11-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 Patl_3726 fd026ea7e59a9964ea26ca5b48709107 439 Gene3D G3DSA:3.20.20.150 2 439 1.2E-178 T 11-10-2018 Patl_0125 6d5732798bb29f14b8c6e36b5e4eb69a 327 Pfam PF01112 Asparaginase 50 313 3.0E-82 T 11-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 Patl_0125 6d5732798bb29f14b8c6e36b5e4eb69a 327 Gene3D G3DSA:3.60.20.30 185 322 5.8E-53 T 11-10-2018 Patl_0125 6d5732798bb29f14b8c6e36b5e4eb69a 327 SUPERFAMILY SSF56235 37 315 2.01E-90 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_2259 7f4d2ec9669fbda5f6bda8aa4b7ac044 254 Gene3D G3DSA:3.40.50.80 116 253 6.9E-26 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_2259 7f4d2ec9669fbda5f6bda8aa4b7ac044 254 Pfam PF04954 Siderophore-interacting protein 123 239 7.1E-22 T 11-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain Patl_2259 7f4d2ec9669fbda5f6bda8aa4b7ac044 254 SUPERFAMILY SSF63380 6 114 8.42E-14 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Patl_2259 7f4d2ec9669fbda5f6bda8aa4b7ac044 254 Gene3D G3DSA:2.40.30.10 1 114 1.2E-30 T 11-10-2018 Patl_2259 7f4d2ec9669fbda5f6bda8aa4b7ac044 254 Pfam PF08021 Siderophore-interacting FAD-binding domain 10 114 6.9E-28 T 11-10-2018 IPR013113 FAD-binding 9, siderophore-interacting Patl_2111 ddf788e901b2831a9eaf161acebba725 411 SUPERFAMILY SSF56349 41 405 1.38E-24 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Patl_2111 ddf788e901b2831a9eaf161acebba725 411 Gene3D G3DSA:1.10.443.10 190 398 3.9E-27 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Patl_2111 ddf788e901b2831a9eaf161acebba725 411 Pfam PF00589 Phage integrase family 203 396 9.2E-11 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Patl_2109 8f3774d77127a4500eeb5f0ef11ab1dc 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 7 120 3.3E-6 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Patl_2109 8f3774d77127a4500eeb5f0ef11ab1dc 271 Gene3D G3DSA:3.40.30.10 129 270 1.1E-26 T 11-10-2018 Patl_2109 8f3774d77127a4500eeb5f0ef11ab1dc 271 SUPERFAMILY SSF52833 136 267 2.03E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_2109 8f3774d77127a4500eeb5f0ef11ab1dc 271 ProSitePatterns PS00194 Thioredoxin family active site. 160 178 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Patl_2109 8f3774d77127a4500eeb5f0ef11ab1dc 271 Pfam PF00578 AhpC/TSA family 135 244 1.8E-10 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_0005 20139e07cfabea73b246dab2c4c1aa7b 232 Gene3D G3DSA:3.40.50.1860 4 223 7.2E-84 T 11-10-2018 Patl_0005 20139e07cfabea73b246dab2c4c1aa7b 232 Gene3D G3DSA:3.40.50.1860 104 215 7.2E-84 T 11-10-2018 Patl_0005 20139e07cfabea73b246dab2c4c1aa7b 232 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 231 9.6E-71 T 11-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 Patl_0005 20139e07cfabea73b246dab2c4c1aa7b 232 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 193 203 - T 11-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Patl_0005 20139e07cfabea73b246dab2c4c1aa7b 232 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 2.3E-59 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Patl_0005 20139e07cfabea73b246dab2c4c1aa7b 232 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Patl_0005 20139e07cfabea73b246dab2c4c1aa7b 232 SUPERFAMILY SSF53681 1 114 5.75E-33 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Patl_0005 20139e07cfabea73b246dab2c4c1aa7b 232 SUPERFAMILY SSF53681 118 229 1.8E-33 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Patl_2974 2d1ef17bb009cb572ebab94021e3eb2f 83 SMART SM00525 59 79 1.9E-5 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Patl_2974 2d1ef17bb009cb572ebab94021e3eb2f 83 SUPERFAMILY SSF48150 3 81 1.48E-22 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Patl_2974 2d1ef17bb009cb572ebab94021e3eb2f 83 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 60 76 4.5E-5 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Patl_2974 2d1ef17bb009cb572ebab94021e3eb2f 83 Gene3D G3DSA:1.10.1670.10 2 83 8.1E-24 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Patl_2425 86789ed57c79fa52e419e0afe6e9bb3a 784 Gene3D G3DSA:3.30.365.10 186 280 4.3E-269 T 11-10-2018 Patl_2425 86789ed57c79fa52e419e0afe6e9bb3a 784 Gene3D G3DSA:3.30.365.10 152 405 4.3E-269 T 11-10-2018 Patl_2425 86789ed57c79fa52e419e0afe6e9bb3a 784 SMART SM01008 31 138 9.6E-38 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Patl_2425 86789ed57c79fa52e419e0afe6e9bb3a 784 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 31 134 4.5E-22 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Patl_2425 86789ed57c79fa52e419e0afe6e9bb3a 784 SUPERFAMILY SSF54665 10 139 1.26E-35 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Patl_2425 86789ed57c79fa52e419e0afe6e9bb3a 784 Gene3D G3DSA:3.30.365.10 457 606 4.3E-269 T 11-10-2018 Patl_2425 86789ed57c79fa52e419e0afe6e9bb3a 784 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 152 704 2.7E-194 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Patl_2425 86789ed57c79fa52e419e0afe6e9bb3a 784 Gene3D G3DSA:3.90.1170.50 17 138 4.3E-269 T 11-10-2018 Patl_2425 86789ed57c79fa52e419e0afe6e9bb3a 784 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 17 774 0.0 T 11-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 Patl_2425 86789ed57c79fa52e419e0afe6e9bb3a 784 Gene3D G3DSA:3.30.365.10 139 769 4.3E-269 T 11-10-2018 Patl_2425 86789ed57c79fa52e419e0afe6e9bb3a 784 SUPERFAMILY SSF56003 144 770 1.15E-190 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Patl_1252 49f8a97e06f38b67d86fb9e1816e9a98 185 SUPERFAMILY SSF55194 3 184 2.35E-69 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Patl_1252 49f8a97e06f38b67d86fb9e1816e9a98 185 Gene3D G3DSA:3.30.1360.40 31 105 2.3E-66 T 11-10-2018 Patl_1252 49f8a97e06f38b67d86fb9e1816e9a98 185 Pfam PF01765 Ribosome recycling factor 22 183 1.8E-61 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Patl_1252 49f8a97e06f38b67d86fb9e1816e9a98 185 Gene3D G3DSA:1.10.132.20 12 182 2.3E-66 T 11-10-2018 Patl_1252 49f8a97e06f38b67d86fb9e1816e9a98 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 2.9E-72 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Patl_1252 49f8a97e06f38b67d86fb9e1816e9a98 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.906 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Patl_1332 f4d77f1422322c95ef60db61d5470b9a 204 SUPERFAMILY SSF88659 146 201 4.3E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_1332 f4d77f1422322c95ef60db61d5470b9a 204 Pfam PF04545 Sigma-70, region 4 151 198 1.2E-13 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Patl_1332 f4d77f1422322c95ef60db61d5470b9a 204 Gene3D G3DSA:1.10.1740.10 26 107 3.5E-21 T 11-10-2018 Patl_1332 f4d77f1422322c95ef60db61d5470b9a 204 SUPERFAMILY SSF88946 27 123 8.63E-21 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Patl_1332 f4d77f1422322c95ef60db61d5470b9a 204 Pfam PF04542 Sigma-70 region 2 44 111 1.2E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Patl_1332 f4d77f1422322c95ef60db61d5470b9a 204 Gene3D G3DSA:1.10.10.10 108 201 2.2E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1332 f4d77f1422322c95ef60db61d5470b9a 204 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 200 8.8E-28 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Patl_2684 5d5c4039ff34363cbd3febef0effa635 254 Pfam PF06439 Domain of Unknown Function (DUF1080) 61 252 3.5E-38 T 11-10-2018 IPR010496 Domain of unknown function DUF1080 Patl_2684 5d5c4039ff34363cbd3febef0effa635 254 Gene3D G3DSA:2.60.120.560 20 254 2.9E-88 T 11-10-2018 Patl_0223 59509215b147ccaa3e92df4fbfaba2d8 357 SUPERFAMILY SSF53187 14 355 2.63E-15 T 11-10-2018 Patl_2048 4b51cb7afe84dab02a237108a4f25068 306 Hamap MF_00313 Glutaminase [glsA]. 1 304 45.219 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Patl_2048 4b51cb7afe84dab02a237108a4f25068 306 Gene3D G3DSA:3.40.710.10 1 306 9.5E-111 T 11-10-2018 Patl_2048 4b51cb7afe84dab02a237108a4f25068 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 6 304 1.2E-128 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Patl_2048 4b51cb7afe84dab02a237108a4f25068 306 SUPERFAMILY SSF56601 2 304 2.48E-112 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Patl_2048 4b51cb7afe84dab02a237108a4f25068 306 Pfam PF04960 Glutaminase 19 304 1.2E-113 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 Patl_3281 5ce871fac5249dc5b1d605f5fb722e80 303 SUPERFAMILY SSF52540 6 264 5.03E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3281 5ce871fac5249dc5b1d605f5fb722e80 303 SMART SM00382 42 196 3.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3281 5ce871fac5249dc5b1d605f5fb722e80 303 Pfam PF13401 AAA domain 42 172 4.6E-22 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3281 5ce871fac5249dc5b1d605f5fb722e80 303 Gene3D G3DSA:3.40.50.300 28 186 2.5E-16 T 11-10-2018 Patl_3005 09ce07e908d77305ad8ff57e5ff13bdf 370 Pfam PF02954 Bacterial regulatory protein, Fis family 321 359 4.0E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_3005 09ce07e908d77305ad8ff57e5ff13bdf 370 Gene3D G3DSA:1.10.8.60 182 265 7.8E-27 T 11-10-2018 Patl_3005 09ce07e908d77305ad8ff57e5ff13bdf 370 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 10 359 1.3E-163 T 11-10-2018 IPR014317 Transcription activator PspF Patl_3005 09ce07e908d77305ad8ff57e5ff13bdf 370 SMART SM00382 30 181 2.8E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3005 09ce07e908d77305ad8ff57e5ff13bdf 370 Gene3D G3DSA:3.40.50.300 1 181 1.5E-56 T 11-10-2018 Patl_3005 09ce07e908d77305ad8ff57e5ff13bdf 370 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 224 233 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Patl_3005 09ce07e908d77305ad8ff57e5ff13bdf 370 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 96 111 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Patl_3005 09ce07e908d77305ad8ff57e5ff13bdf 370 SUPERFAMILY SSF46689 305 361 3.58E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_3005 09ce07e908d77305ad8ff57e5ff13bdf 370 SUPERFAMILY SSF52540 10 251 2.32E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3005 09ce07e908d77305ad8ff57e5ff13bdf 370 Gene3D G3DSA:1.10.10.60 292 362 1.0E-8 T 11-10-2018 Patl_3005 09ce07e908d77305ad8ff57e5ff13bdf 370 Pfam PF00158 Sigma-54 interaction domain 10 173 1.8E-58 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Patl_0656 00ccd62839e1b296e5d8af43edb0545a 586 SUPERFAMILY SSF47203 285 444 1.58E-43 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Patl_0656 00ccd62839e1b296e5d8af43edb0545a 586 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 456 582 1.3E-27 T 11-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain Patl_0656 00ccd62839e1b296e5d8af43edb0545a 586 Gene3D G3DSA:2.40.110.10 164 286 4.7E-95 T 11-10-2018 Patl_0656 00ccd62839e1b296e5d8af43edb0545a 586 SUPERFAMILY SSF56645 79 297 3.01E-52 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Patl_0656 00ccd62839e1b296e5d8af43edb0545a 586 Gene3D G3DSA:1.20.140.10 287 437 4.7E-95 T 11-10-2018 Patl_0656 00ccd62839e1b296e5d8af43edb0545a 586 Gene3D G3DSA:1.10.540.10 84 163 4.7E-95 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Patl_0656 00ccd62839e1b296e5d8af43edb0545a 586 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 84 161 2.6E-8 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Patl_0656 00ccd62839e1b296e5d8af43edb0545a 586 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 166 274 1.1E-15 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Patl_0656 00ccd62839e1b296e5d8af43edb0545a 586 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 288 439 4.8E-27 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Patl_1330 ff871d91c463e021c511680d0846aceb 140 Gene3D G3DSA:3.10.450.50 3 127 5.6E-21 T 11-10-2018 Patl_1330 ff871d91c463e021c511680d0846aceb 140 Pfam PF12680 SnoaL-like domain 9 108 2.1E-13 T 11-10-2018 IPR037401 SnoaL-like domain Patl_1330 ff871d91c463e021c511680d0846aceb 140 SUPERFAMILY SSF54427 1 120 3.93E-23 T 11-10-2018 IPR032710 NTF2-like domain superfamily Patl_1011 e3420099485be16003434e630229821c 118 Gene3D G3DSA:4.10.910.10 72 118 7.0E-25 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1011 e3420099485be16003434e630229821c 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 9.3E-53 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1011 e3420099485be16003434e630229821c 118 PIRSF PIRSF002134 1 118 3.1E-39 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1011 e3420099485be16003434e630229821c 118 SUPERFAMILY SSF46946 2 114 3.03E-43 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Patl_1011 e3420099485be16003434e630229821c 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.055 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1011 e3420099485be16003434e630229821c 118 Gene3D G3DSA:1.10.8.50 1 71 1.1E-27 T 11-10-2018 Patl_1011 e3420099485be16003434e630229821c 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1011 e3420099485be16003434e630229821c 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.8E-31 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_4124 216a8914e2726e8af085a1063e03e997 415 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 375 7.8E-77 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Patl_4124 216a8914e2726e8af085a1063e03e997 415 SUPERFAMILY SSF111369 53 299 7.19E-68 T 11-10-2018 Patl_4124 216a8914e2726e8af085a1063e03e997 415 Gene3D G3DSA:2.40.30.170 51 304 4.2E-94 T 11-10-2018 Patl_4124 216a8914e2726e8af085a1063e03e997 415 Gene3D G3DSA:2.40.420.20 305 373 4.2E-94 T 11-10-2018 Patl_4124 216a8914e2726e8af085a1063e03e997 415 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 294 1.4E-18 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Patl_4124 216a8914e2726e8af085a1063e03e997 415 Gene3D G3DSA:2.40.50.100 64 207 4.2E-94 T 11-10-2018 Patl_4124 216a8914e2726e8af085a1063e03e997 415 Gene3D G3DSA:1.10.287.470 99 172 4.2E-94 T 11-10-2018 Patl_1993 1ee2dfb5ccd4b14e289f155d4e753632 679 Pfam PF03572 Peptidase family S41 363 531 6.8E-50 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Patl_1993 1ee2dfb5ccd4b14e289f155d4e753632 679 SUPERFAMILY SSF52096 168 546 3.15E-69 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_1993 1ee2dfb5ccd4b14e289f155d4e753632 679 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 537 669 3.9E-39 T 11-10-2018 IPR020992 Tail specific protease, C-terminal Patl_1993 1ee2dfb5ccd4b14e289f155d4e753632 679 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 239 321 6.8E-12 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Patl_1993 1ee2dfb5ccd4b14e289f155d4e753632 679 SUPERFAMILY SSF50156 237 323 2.91E-11 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 Patl_1993 1ee2dfb5ccd4b14e289f155d4e753632 679 Gene3D G3DSA:2.30.42.10 236 322 2.6E-13 T 11-10-2018 Patl_1993 1ee2dfb5ccd4b14e289f155d4e753632 679 SMART SM00228 247 324 3.4E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 Patl_1993 1ee2dfb5ccd4b14e289f155d4e753632 679 SMART SM00245 328 534 5.6E-62 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Patl_1993 1ee2dfb5ccd4b14e289f155d4e753632 679 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 196 554 9.3E-103 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Patl_1993 1ee2dfb5ccd4b14e289f155d4e753632 679 Gene3D G3DSA:3.90.226.10 323 552 1.3E-55 T 11-10-2018 Patl_1277 7d49d8135d77f653248480152313d25c 251 Gene3D G3DSA:2.40.30.70 33 155 2.4E-47 T 11-10-2018 IPR036414 YaeB, N-terminal domain superfamily Patl_1277 7d49d8135d77f653248480152313d25c 251 Gene3D G3DSA:3.30.2310.10 156 239 2.2E-22 T 11-10-2018 Patl_1277 7d49d8135d77f653248480152313d25c 251 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 12 158 1.7E-48 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain Patl_1277 7d49d8135d77f653248480152313d25c 251 SUPERFAMILY SSF118196 12 238 1.57E-80 T 11-10-2018 IPR036413 YaeB-like superfamily Patl_1277 7d49d8135d77f653248480152313d25c 251 Pfam PF01980 Uncharacterised protein family UPF0066 30 152 2.2E-41 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain Patl_3573 994cdfe714a68d3fa6ead7d66eb7e750 475 Pfam PF12801 4Fe-4S binding domain 96 134 3.5E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Patl_3573 994cdfe714a68d3fa6ead7d66eb7e750 475 Gene3D G3DSA:2.60.40.10 360 475 1.2E-36 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_3573 994cdfe714a68d3fa6ead7d66eb7e750 475 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 474 1.9E-30 T 11-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain Patl_3573 994cdfe714a68d3fa6ead7d66eb7e750 475 SUPERFAMILY SSF54862 106 364 1.59E-27 T 11-10-2018 Patl_3573 994cdfe714a68d3fa6ead7d66eb7e750 475 Pfam PF13746 4Fe-4S dicluster domain 220 329 9.0E-46 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Patl_3573 994cdfe714a68d3fa6ead7d66eb7e750 475 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 44 474 2.6E-165 T 11-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 Patl_3573 994cdfe714a68d3fa6ead7d66eb7e750 475 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 276 287 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Patl_1218 90a39e609ebd2d1185f26dcc04353521 192 Pfam PF01694 Rhomboid family 57 190 8.5E-19 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Patl_1218 90a39e609ebd2d1185f26dcc04353521 192 SUPERFAMILY SSF144091 22 191 6.15E-27 T 11-10-2018 Patl_1218 90a39e609ebd2d1185f26dcc04353521 192 Gene3D G3DSA:1.20.1540.10 16 188 2.3E-11 T 11-10-2018 IPR035952 Rhomboid-like superfamily Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 Gene3D G3DSA:3.40.50.2300 401 525 1.6E-30 T 11-10-2018 Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 SMART SM00448 401 517 6.1E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 SMART SM00448 550 660 1.0E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 SMART SM00448 6 121 1.5E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 Gene3D G3DSA:3.40.50.2300 3 139 2.2E-22 T 11-10-2018 Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 Gene3D G3DSA:3.30.565.10 213 374 1.0E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 Gene3D G3DSA:3.40.50.2300 537 662 7.8E-22 T 11-10-2018 Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 SUPERFAMILY SSF52172 402 522 3.42E-29 T 11-10-2018 IPR011006 CheY-like superfamily Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 258 370 6.6E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 Gene3D G3DSA:1.10.287.130 140 212 3.6E-21 T 11-10-2018 Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 SUPERFAMILY SSF47384 137 212 1.49E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 SUPERFAMILY SSF55874 200 369 1.57E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 Pfam PF00512 His Kinase A (phospho-acceptor) domain 146 209 1.0E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 326 5.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 370 5.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 312 5.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 351 5.2E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 SUPERFAMILY SSF52172 550 661 2.56E-22 T 11-10-2018 IPR011006 CheY-like superfamily Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 SMART SM00387 258 373 4.3E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 Pfam PF00072 Response regulator receiver domain 9 110 7.8E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 Pfam PF00072 Response regulator receiver domain 553 660 1.0E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 Pfam PF00072 Response regulator receiver domain 403 517 5.5E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 SUPERFAMILY SSF52172 7 139 7.54E-25 T 11-10-2018 IPR011006 CheY-like superfamily Patl_4152 52ba3632d8e67ca0b93dc0d3e5eee6cc 662 SMART SM00388 146 211 5.8E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2127 893d6817b23c28efa8eafc297cffad15 175 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 2.8E-14 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Patl_3687 96d19ff7b979c60a0d4d2bc670fb125a 718 SUPERFAMILY SSF51445 298 627 9.31E-104 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_3687 96d19ff7b979c60a0d4d2bc670fb125a 718 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 619 715 9.2E-13 T 11-10-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Patl_3687 96d19ff7b979c60a0d4d2bc670fb125a 718 PIRSF PIRSF005536 1 676 2.3E-214 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Patl_3687 96d19ff7b979c60a0d4d2bc670fb125a 718 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 26 247 1.5E-39 T 11-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Patl_3687 96d19ff7b979c60a0d4d2bc670fb125a 718 PRINTS PR00743 Glycosyl hydrolase family 36 signature 513 529 1.8E-56 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Patl_3687 96d19ff7b979c60a0d4d2bc670fb125a 718 PRINTS PR00743 Glycosyl hydrolase family 36 signature 265 285 1.8E-56 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Patl_3687 96d19ff7b979c60a0d4d2bc670fb125a 718 PRINTS PR00743 Glycosyl hydrolase family 36 signature 331 346 1.8E-56 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Patl_3687 96d19ff7b979c60a0d4d2bc670fb125a 718 PRINTS PR00743 Glycosyl hydrolase family 36 signature 214 229 1.8E-56 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Patl_3687 96d19ff7b979c60a0d4d2bc670fb125a 718 PRINTS PR00743 Glycosyl hydrolase family 36 signature 381 403 1.8E-56 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Patl_3687 96d19ff7b979c60a0d4d2bc670fb125a 718 PRINTS PR00743 Glycosyl hydrolase family 36 signature 303 317 1.8E-56 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Patl_3687 96d19ff7b979c60a0d4d2bc670fb125a 718 PRINTS PR00743 Glycosyl hydrolase family 36 signature 439 454 1.8E-56 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Patl_3687 96d19ff7b979c60a0d4d2bc670fb125a 718 PRINTS PR00743 Glycosyl hydrolase family 36 signature 488 504 1.8E-56 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Patl_3687 96d19ff7b979c60a0d4d2bc670fb125a 718 Gene3D G3DSA:2.60.40.1180 601 718 3.6E-6 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta Patl_3687 96d19ff7b979c60a0d4d2bc670fb125a 718 Gene3D G3DSA:3.20.20.70 283 600 8.3E-128 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_3687 96d19ff7b979c60a0d4d2bc670fb125a 718 Gene3D G3DSA:2.70.98.60 2 282 3.4E-46 T 11-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Patl_3687 96d19ff7b979c60a0d4d2bc670fb125a 718 Pfam PF02065 Melibiase 262 603 1.0E-129 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 Patl_3314 3f91379a5a8f9594aaf80600b33f783a 233 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 7 217 9.7E-70 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Patl_3314 3f91379a5a8f9594aaf80600b33f783a 233 Gene3D G3DSA:1.20.58.220 1 118 2.1E-36 T 11-10-2018 IPR038078 PhoU-like domain superfamily Patl_3314 3f91379a5a8f9594aaf80600b33f783a 233 SUPERFAMILY SSF109755 7 228 1.47E-68 T 11-10-2018 Patl_3314 3f91379a5a8f9594aaf80600b33f783a 233 PIRSF PIRSF003107 2 223 8.1E-67 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Patl_3314 3f91379a5a8f9594aaf80600b33f783a 233 Pfam PF01895 PhoU domain 124 208 1.2E-17 T 11-10-2018 IPR026022 PhoU domain Patl_3314 3f91379a5a8f9594aaf80600b33f783a 233 Pfam PF01895 PhoU domain 21 107 3.4E-19 T 11-10-2018 IPR026022 PhoU domain Patl_3314 3f91379a5a8f9594aaf80600b33f783a 233 Gene3D G3DSA:1.20.58.220 119 231 2.4E-35 T 11-10-2018 IPR038078 PhoU-like domain superfamily Patl_1969 469330b5dd92055f75e773290230833d 318 SUPERFAMILY SSF53613 1 305 7.33E-63 T 11-10-2018 IPR029056 Ribokinase-like Patl_1969 469330b5dd92055f75e773290230833d 318 Pfam PF00294 pfkB family carbohydrate kinase 8 299 2.1E-47 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB Patl_1969 469330b5dd92055f75e773290230833d 318 Gene3D G3DSA:3.40.1190.20 4 310 4.7E-68 T 11-10-2018 IPR029056 Ribokinase-like Patl_0491 a68ef8f8b4d56123e4074748c396c5a0 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 7.8E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Patl_0491 a68ef8f8b4d56123e4074748c396c5a0 112 SUPERFAMILY SSF54913 1 112 7.31E-45 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Patl_0491 a68ef8f8b4d56123e4074748c396c5a0 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Patl_0491 a68ef8f8b4d56123e4074748c396c5a0 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Patl_0491 a68ef8f8b4d56123e4074748c396c5a0 112 PRINTS PR00340 P-II protein signature 23 41 4.2E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Patl_0491 a68ef8f8b4d56123e4074748c396c5a0 112 PRINTS PR00340 P-II protein signature 2 17 4.2E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Patl_0491 a68ef8f8b4d56123e4074748c396c5a0 112 PRINTS PR00340 P-II protein signature 83 103 4.2E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Patl_0491 a68ef8f8b4d56123e4074748c396c5a0 112 PRINTS PR00340 P-II protein signature 52 75 4.2E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Patl_0491 a68ef8f8b4d56123e4074748c396c5a0 112 SMART SM00938 4 105 1.2E-65 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Patl_0491 a68ef8f8b4d56123e4074748c396c5a0 112 PIRSF PIRSF039144 1 112 1.3E-55 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Patl_0491 a68ef8f8b4d56123e4074748c396c5a0 112 Gene3D G3DSA:3.30.70.120 1 112 4.5E-46 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Patl_1281 a35a766796b2dfea13282b92c2e122d1 355 SUPERFAMILY SSF56935 68 334 2.05E-5 T 11-10-2018 Patl_1464 06a14b84e8384f6a933d5d0eadcd56fd 328 PIRSF PIRSF037442 39 328 4.8E-103 T 11-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 Patl_1464 06a14b84e8384f6a933d5d0eadcd56fd 328 SUPERFAMILY SSF53474 50 301 4.98E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1464 06a14b84e8384f6a933d5d0eadcd56fd 328 Gene3D G3DSA:3.40.50.1820 44 307 1.1E-17 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1464 06a14b84e8384f6a933d5d0eadcd56fd 328 Pfam PF12146 Serine aminopeptidase, S33 77 287 6.8E-10 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 Patl_0382 abef1b79643d6dd27d3882d58eda3061 393 SUPERFAMILY SSF103473 20 384 1.83E-18 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_0382 abef1b79643d6dd27d3882d58eda3061 393 Gene3D G3DSA:1.20.1250.20 12 379 7.8E-13 T 11-10-2018 Patl_1718 95427fdd06980fc449931d5576d6bc32 108 Pfam PF08827 Domain of unknown function (DUF1805) 49 107 1.0E-23 T 11-10-2018 IPR014931 Protein of unknown function DUF1805 Patl_1718 95427fdd06980fc449931d5576d6bc32 108 Gene3D G3DSA:3.30.1980.10 12 108 9.4E-26 T 11-10-2018 IPR036493 Hypothetical protein YunC superfamily Patl_1718 95427fdd06980fc449931d5576d6bc32 108 SUPERFAMILY SSF102891 35 107 9.55E-21 T 11-10-2018 IPR036493 Hypothetical protein YunC superfamily Patl_1596 eed0bf556df9aed0034b71e2c994e0ad 351 Gene3D G3DSA:3.40.190.10 39 314 1.3E-118 T 11-10-2018 Patl_1596 eed0bf556df9aed0034b71e2c994e0ad 351 Pfam PF13343 Bacterial extracellular solute-binding protein 86 309 6.6E-23 T 11-10-2018 Patl_1596 eed0bf556df9aed0034b71e2c994e0ad 351 Gene3D G3DSA:3.40.190.10 137 349 1.3E-118 T 11-10-2018 Patl_1596 eed0bf556df9aed0034b71e2c994e0ad 351 PIRSF PIRSF002825 12 351 1.7E-87 T 11-10-2018 IPR026045 Ferric binding protein Patl_1596 eed0bf556df9aed0034b71e2c994e0ad 351 SUPERFAMILY SSF53850 33 343 4.62E-74 T 11-10-2018 Patl_0532 9101836966a64d3837ed8b9ad0f7a829 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 191 398 1.2E-73 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 Patl_0532 9101836966a64d3837ed8b9ad0f7a829 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 399 4.8E-150 T 11-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 Patl_0532 9101836966a64d3837ed8b9ad0f7a829 402 Pfam PF07670 Nucleoside recognition 89 185 7.9E-9 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Patl_0532 9101836966a64d3837ed8b9ad0f7a829 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 1.4E-22 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 Patl_1454 0bf7dc2a0a586549802d269da054cacf 60 Pfam PF08173 Membrane bound YbgT-like protein 11 36 5.0E-16 T 11-10-2018 IPR012994 Membrane bound YbgT-like Patl_1454 0bf7dc2a0a586549802d269da054cacf 60 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 11 36 2.0E-17 T 11-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 Patl_2329 73e6b86959e8b5e9a1396734298fcfe2 479 Gene3D G3DSA:1.20.1250.20 256 459 9.0E-22 T 11-10-2018 Patl_2329 73e6b86959e8b5e9a1396734298fcfe2 479 SUPERFAMILY SSF103473 17 469 5.49E-67 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_2329 73e6b86959e8b5e9a1396734298fcfe2 479 Gene3D G3DSA:1.20.1720.10 17 225 2.5E-45 T 11-10-2018 Patl_2329 73e6b86959e8b5e9a1396734298fcfe2 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 4.9E-7 T 11-10-2018 Patl_2329 73e6b86959e8b5e9a1396734298fcfe2 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 4.9E-7 T 11-10-2018 Patl_2329 73e6b86959e8b5e9a1396734298fcfe2 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 4.9E-7 T 11-10-2018 Patl_2329 73e6b86959e8b5e9a1396734298fcfe2 479 Pfam PF07690 Major Facilitator Superfamily 22 410 7.3E-56 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_2309 a7e10dd7f2037534ef8e67db9fd1f027 216 Pfam PF00717 Peptidase S24-like 34 113 2.3E-16 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Patl_2309 a7e10dd7f2037534ef8e67db9fd1f027 216 Gene3D G3DSA:2.10.109.10 26 198 8.2E-45 T 11-10-2018 Patl_2309 a7e10dd7f2037534ef8e67db9fd1f027 216 SUPERFAMILY SSF51306 26 211 1.79E-52 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Patl_2309 a7e10dd7f2037534ef8e67db9fd1f027 216 Gene3D G3DSA:2.170.230.10 102 158 8.2E-45 T 11-10-2018 Patl_2309 a7e10dd7f2037534ef8e67db9fd1f027 216 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 15 199 1.2E-45 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Patl_2309 a7e10dd7f2037534ef8e67db9fd1f027 216 ProSitePatterns PS00760 Signal peptidases I lysine active site. 93 105 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 Patl_2309 a7e10dd7f2037534ef8e67db9fd1f027 216 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 91 103 7.4E-17 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Patl_2309 a7e10dd7f2037534ef8e67db9fd1f027 216 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 159 178 7.4E-17 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Patl_2309 a7e10dd7f2037534ef8e67db9fd1f027 216 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 7.4E-17 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Patl_0972 f5649190e657986cab7dd0ebe1cb0fa1 607 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 601 0.0 T 11-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 Patl_0972 f5649190e657986cab7dd0ebe1cb0fa1 607 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Patl_0972 f5649190e657986cab7dd0ebe1cb0fa1 607 Gene3D G3DSA:3.50.30.80 419 569 3.6E-51 T 11-10-2018 Patl_0972 f5649190e657986cab7dd0ebe1cb0fa1 607 Pfam PF00920 Dehydratase family 65 598 4.5E-163 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Patl_0972 f5649190e657986cab7dd0ebe1cb0fa1 607 SUPERFAMILY SSF52016 419 601 6.75E-58 T 11-10-2018 Patl_0972 f5649190e657986cab7dd0ebe1cb0fa1 607 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Patl_0972 f5649190e657986cab7dd0ebe1cb0fa1 607 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 1 602 58.273 T 11-10-2018 Patl_0972 f5649190e657986cab7dd0ebe1cb0fa1 607 SUPERFAMILY SSF143975 1 418 1.57E-148 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Patl_0457 85189afedd4d054689ce56ff3b4e22c9 408 SUPERFAMILY SSF54292 37 125 4.43E-22 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Patl_0457 85189afedd4d054689ce56ff3b4e22c9 408 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 4 408 8.0E-225 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 Patl_0457 85189afedd4d054689ce56ff3b4e22c9 408 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 44 114 3.0E-10 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Patl_0457 85189afedd4d054689ce56ff3b4e22c9 408 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 2 408 62.229 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 Patl_0457 85189afedd4d054689ce56ff3b4e22c9 408 SUPERFAMILY SSF63380 106 272 1.11E-33 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Patl_0457 85189afedd4d054689ce56ff3b4e22c9 408 SUPERFAMILY SSF52343 260 404 4.19E-36 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_0457 85189afedd4d054689ce56ff3b4e22c9 408 Pfam PF00175 Oxidoreductase NAD-binding domain 278 386 3.0E-17 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Patl_0457 85189afedd4d054689ce56ff3b4e22c9 408 Gene3D G3DSA:2.40.30.10 127 265 1.2E-48 T 11-10-2018 Patl_0457 85189afedd4d054689ce56ff3b4e22c9 408 Gene3D G3DSA:3.10.20.30 35 126 5.1E-32 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_0457 85189afedd4d054689ce56ff3b4e22c9 408 Pfam PF00970 Oxidoreductase FAD-binding domain 200 267 1.1E-9 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Patl_0457 85189afedd4d054689ce56ff3b4e22c9 408 Gene3D G3DSA:3.40.50.80 276 394 3.1E-32 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Patl_0457 85189afedd4d054689ce56ff3b4e22c9 408 PIRSF PIRSF000044 1 408 8.3E-216 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 Patl_3203 f62ce34fb635b666f4efc608ee4b71d3 247 Gene3D G3DSA:3.10.560.10 146 219 5.2E-23 T 11-10-2018 Patl_3203 f62ce34fb635b666f4efc608ee4b71d3 247 Pfam PF06251 Capsule biosynthesis GfcC 18 247 2.2E-84 T 11-10-2018 IPR010425 Domain of unknown function DUF1017 Patl_1275 9078653b47410c93d5aebfb4a954e42e 279 SUPERFAMILY SSF56281 1 279 1.02E-38 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_1275 9078653b47410c93d5aebfb4a954e42e 279 Pfam PF12706 Beta-lactamase superfamily domain 39 236 5.0E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_1275 9078653b47410c93d5aebfb4a954e42e 279 Gene3D G3DSA:3.60.15.10 2 279 5.1E-40 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_2563 2de94571b214caa072b2100ac1e83ceb 362 SMART SM00937 67 180 1.3E-67 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 Patl_2563 2de94571b214caa072b2100ac1e83ceb 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 359 1.5E-167 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Patl_2563 2de94571b214caa072b2100ac1e83ceb 362 Gene3D G3DSA:3.30.160.20 212 293 1.2E-96 T 11-10-2018 Patl_2563 2de94571b214caa072b2100ac1e83ceb 362 Gene3D G3DSA:1.20.58.410 4 96 1.3E-9 T 11-10-2018 Patl_2563 2de94571b214caa072b2100ac1e83ceb 362 Pfam PF03462 PCRF domain 13 205 1.4E-76 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 Patl_2563 2de94571b214caa072b2100ac1e83ceb 362 Gene3D G3DSA:3.30.70.1660 115 342 1.2E-96 T 11-10-2018 Patl_2563 2de94571b214caa072b2100ac1e83ceb 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.921 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Patl_2563 2de94571b214caa072b2100ac1e83ceb 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Patl_2563 2de94571b214caa072b2100ac1e83ceb 362 SUPERFAMILY SSF75620 12 355 1.96E-138 T 11-10-2018 Patl_2563 2de94571b214caa072b2100ac1e83ceb 362 Pfam PF00472 RF-1 domain 215 323 4.3E-42 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Patl_1459 301b3dbfc9330e77ee5f191853184dae 128 Gene3D G3DSA:3.10.180.10 9 126 5.5E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_1459 301b3dbfc9330e77ee5f191853184dae 128 SUPERFAMILY SSF54593 4 125 1.02E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2730 4bd4a43465015eadcd598ae041bde1c6 422 Gene3D G3DSA:3.40.50.150 200 372 1.9E-30 T 11-10-2018 Patl_2730 4bd4a43465015eadcd598ae041bde1c6 422 SUPERFAMILY SSF53335 184 360 4.11E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_2730 4bd4a43465015eadcd598ae041bde1c6 422 Pfam PF13649 Methyltransferase domain 205 303 8.5E-21 T 11-10-2018 Patl_1911 b3de695266a85a622f6102cf4018e277 458 Gene3D G3DSA:3.40.309.10 233 423 3.8E-146 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Patl_1911 b3de695266a85a622f6102cf4018e277 458 Pfam PF00171 Aldehyde dehydrogenase family 3 454 1.9E-137 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Patl_1911 b3de695266a85a622f6102cf4018e277 458 Gene3D G3DSA:3.40.605.10 10 449 3.8E-146 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_1911 b3de695266a85a622f6102cf4018e277 458 SUPERFAMILY SSF53720 3 456 1.7E-137 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_4281 f22a1002c5bdb840e4d4ec607854bd7d 217 Pfam PF00156 Phosphoribosyl transferase domain 47 159 1.2E-10 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Patl_4281 f22a1002c5bdb840e4d4ec607854bd7d 217 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 137 153 - T 11-10-2018 IPR033379 Histidine acid phosphatase active site Patl_4281 f22a1002c5bdb840e4d4ec607854bd7d 217 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 217 34.004 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Patl_4281 f22a1002c5bdb840e4d4ec607854bd7d 217 Gene3D G3DSA:3.40.50.2020 1 217 1.8E-72 T 11-10-2018 Patl_4281 f22a1002c5bdb840e4d4ec607854bd7d 217 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 5.6E-63 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Patl_4281 f22a1002c5bdb840e4d4ec607854bd7d 217 SUPERFAMILY SSF53271 3 193 3.69E-43 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Patl_0695 cb7a19d68b11adf5a11d5e74091b9d4a 577 Gene3D G3DSA:3.30.420.240 366 560 2.8E-10 T 11-10-2018 Patl_0695 cb7a19d68b11adf5a11d5e74091b9d4a 577 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 7 64 1.3E-9 T 11-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 Patl_0695 cb7a19d68b11adf5a11d5e74091b9d4a 577 Pfam PF17289 Terminase RNaseH-like domain 402 559 1.7E-21 T 11-10-2018 IPR035421 Terminase, large subunit gp17-like Patl_0695 cb7a19d68b11adf5a11d5e74091b9d4a 577 Gene3D G3DSA:3.40.50.300 85 295 1.9E-21 T 11-10-2018 Patl_0695 cb7a19d68b11adf5a11d5e74091b9d4a 577 Pfam PF03237 Terminase-like family 155 374 5.4E-50 T 11-10-2018 IPR004921 Terminase large subunit, T4likevirus-type Patl_1268 d3686dfb976089e5c4e65e7c1c0f80fc 513 SUPERFAMILY SSF48452 138 242 1.9E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1268 d3686dfb976089e5c4e65e7c1c0f80fc 513 SMART SM00028 418 451 0.19 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1268 d3686dfb976089e5c4e65e7c1c0f80fc 513 SMART SM00028 205 238 86.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1268 d3686dfb976089e5c4e65e7c1c0f80fc 513 SMART SM00028 138 171 39.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1268 d3686dfb976089e5c4e65e7c1c0f80fc 513 Pfam PF00072 Response regulator receiver domain 2 96 3.5E-7 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1268 d3686dfb976089e5c4e65e7c1c0f80fc 513 SUPERFAMILY SSF52172 3 122 8.82E-13 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1268 d3686dfb976089e5c4e65e7c1c0f80fc 513 Gene3D G3DSA:3.40.50.2300 1 106 9.1E-12 T 11-10-2018 Patl_1268 d3686dfb976089e5c4e65e7c1c0f80fc 513 Gene3D G3DSA:1.25.40.10 108 321 2.3E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_3098 17738d4cc23a3302b9ed05fa7091e1f7 228 Pfam PF13860 FlgD Ig-like domain 113 180 3.6E-16 T 11-10-2018 IPR025965 FlgD Ig-like domain Patl_3098 17738d4cc23a3302b9ed05fa7091e1f7 228 Gene3D G3DSA:2.60.40.4070 104 191 2.4E-35 T 11-10-2018 Patl_3098 17738d4cc23a3302b9ed05fa7091e1f7 228 Gene3D G3DSA:2.30.30.910 88 221 2.4E-35 T 11-10-2018 Patl_3098 17738d4cc23a3302b9ed05fa7091e1f7 228 Pfam PF03963 Flagellar hook capping protein - N-terminal region 23 78 4.5E-20 T 11-10-2018 IPR005648 Flagellar hook capping protein Patl_3098 17738d4cc23a3302b9ed05fa7091e1f7 228 Pfam PF13861 FlgD Tudor-like domain 87 223 1.7E-16 T 11-10-2018 IPR025963 FlgD Tudor-like domain Patl_3628 9411f1d07f58b0d8aab53dd95b73e3aa 375 Pfam PF00155 Aminotransferase class I and II 46 371 1.0E-36 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Patl_3628 9411f1d07f58b0d8aab53dd95b73e3aa 375 SUPERFAMILY SSF53383 2 374 1.11E-91 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_3628 9411f1d07f58b0d8aab53dd95b73e3aa 375 Gene3D G3DSA:3.40.640.10 64 287 5.0E-127 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_3628 9411f1d07f58b0d8aab53dd95b73e3aa 375 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 3 374 1.1E-115 T 11-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 Patl_3628 9411f1d07f58b0d8aab53dd95b73e3aa 375 Gene3D G3DSA:3.90.1150.10 13 371 5.0E-127 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_3346 2551915afeb85849ee386a26c23f3ceb 158 Gene3D G3DSA:2.40.70.10 32 157 5.9E-29 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily Patl_3346 2551915afeb85849ee386a26c23f3ceb 158 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 65 76 - T 11-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 Patl_3346 2551915afeb85849ee386a26c23f3ceb 158 SUPERFAMILY SSF50630 43 145 7.79E-19 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily Patl_3346 2551915afeb85849ee386a26c23f3ceb 158 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 41 156 4.6E-29 T 11-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal Patl_3346 2551915afeb85849ee386a26c23f3ceb 158 Pfam PF13975 gag-polyprotein putative aspartyl protease 56 143 3.9E-22 T 11-10-2018 Patl_3078 3bbb593d763b98a4cc2392677e2b308c 233 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 3 224 1.8E-109 T 11-10-2018 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 Patl_3078 3bbb593d763b98a4cc2392677e2b308c 233 Pfam PF02348 Cytidylyltransferase 4 205 8.2E-33 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 Patl_3078 3bbb593d763b98a4cc2392677e2b308c 233 SUPERFAMILY SSF53448 3 226 1.94E-54 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3078 3bbb593d763b98a4cc2392677e2b308c 233 Gene3D G3DSA:3.90.550.10 2 226 6.0E-63 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3776 a1291d702175df8119cab0d127d3c437 707 Gene3D G3DSA:2.40.170.20 174 707 2.9E-122 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_3776 a1291d702175df8119cab0d127d3c437 707 Gene3D G3DSA:2.170.130.10 50 173 2.6E-23 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_3776 a1291d702175df8119cab0d127d3c437 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 164 1.6E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3776 a1291d702175df8119cab0d127d3c437 707 Pfam PF00593 TonB dependent receptor 242 705 4.8E-59 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3776 a1291d702175df8119cab0d127d3c437 707 SUPERFAMILY SSF56935 38 707 4.4E-129 T 11-10-2018 Patl_3776 a1291d702175df8119cab0d127d3c437 707 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 63 707 1.7E-102 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 Patl_0827 b8eaac8f8fffdd3d497c3700be0f0510 292 SMART SM00342 197 280 2.4E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_0827 b8eaac8f8fffdd3d497c3700be0f0510 292 Gene3D G3DSA:1.10.10.60 180 230 5.1E-9 T 11-10-2018 Patl_0827 b8eaac8f8fffdd3d497c3700be0f0510 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 2.5E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Patl_0827 b8eaac8f8fffdd3d497c3700be0f0510 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 2.5E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Patl_0827 b8eaac8f8fffdd3d497c3700be0f0510 292 Gene3D G3DSA:1.10.10.60 231 286 7.4E-17 T 11-10-2018 Patl_0827 b8eaac8f8fffdd3d497c3700be0f0510 292 SUPERFAMILY SSF46689 234 283 1.83E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0827 b8eaac8f8fffdd3d497c3700be0f0510 292 SUPERFAMILY SSF51215 31 160 8.24E-7 T 11-10-2018 IPR037923 Transcription regulator HTH-like Patl_0827 b8eaac8f8fffdd3d497c3700be0f0510 292 Pfam PF12833 Helix-turn-helix domain 204 281 5.5E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_0827 b8eaac8f8fffdd3d497c3700be0f0510 292 SUPERFAMILY SSF46689 182 231 6.44E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0930 d49e45262022d9003fb0c060819d611d 547 SUPERFAMILY SSF53474 3 331 2.78E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0930 d49e45262022d9003fb0c060819d611d 547 SUPERFAMILY SSF49785 323 542 2.13E-60 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0930 d49e45262022d9003fb0c060819d611d 547 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 6 542 1.3E-132 T 11-10-2018 IPR005674 CocE/Serine esterase GO:0016787 Patl_0930 d49e45262022d9003fb0c060819d611d 547 Gene3D G3DSA:1.10.3020.10 135 212 2.2E-92 T 11-10-2018 Patl_0930 d49e45262022d9003fb0c060819d611d 547 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 10 267 7.9E-56 T 11-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 Patl_0930 d49e45262022d9003fb0c060819d611d 547 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 310 536 3.7E-48 T 11-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 Patl_0930 d49e45262022d9003fb0c060819d611d 547 SMART SM00939 292 537 9.7E-88 T 11-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 Patl_0930 d49e45262022d9003fb0c060819d611d 547 Gene3D G3DSA:3.40.50.1820 5 324 2.2E-92 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0930 d49e45262022d9003fb0c060819d611d 547 Gene3D G3DSA:2.60.120.260 325 540 4.5E-77 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_3067 ecc0caa9b7b89f737175820e0339dd8c 369 SUPERFAMILY SSF53335 176 349 9.58E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3067 ecc0caa9b7b89f737175820e0339dd8c 369 Pfam PF08241 Methyltransferase domain 208 302 8.5E-18 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Patl_3067 ecc0caa9b7b89f737175820e0339dd8c 369 Gene3D G3DSA:3.40.50.150 155 351 1.1E-35 T 11-10-2018 Patl_1672 e74b32671243e5586c65ba25960c69ef 405 SUPERFAMILY SSF142338 32 398 5.75E-60 T 11-10-2018 Patl_1672 e74b32671243e5586c65ba25960c69ef 405 TIGRFAM TIGR04357 CofD_rel_GAK: CofD-related protein, GAK system 32 398 1.1E-147 T 11-10-2018 IPR027591 CofD-related protein, GAK system Patl_1672 e74b32671243e5586c65ba25960c69ef 405 Pfam PF01933 Uncharacterised protein family UPF0052 37 378 3.6E-40 T 11-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 Patl_2380 647cac06220b60c51317e9d01d6641f9 219 Pfam PF04356 Protein of unknown function (DUF489) 15 205 4.8E-74 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD Patl_2380 647cac06220b60c51317e9d01d6641f9 219 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 17 204 4.0E-107 T 11-10-2018 Patl_2380 647cac06220b60c51317e9d01d6641f9 219 SUPERFAMILY SSF101322 13 216 4.58E-71 T 11-10-2018 IPR035932 HflD-like superfamily Patl_2380 647cac06220b60c51317e9d01d6641f9 219 Gene3D G3DSA:1.10.3890.10 10 218 3.2E-73 T 11-10-2018 IPR035932 HflD-like superfamily Patl_2380 647cac06220b60c51317e9d01d6641f9 219 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 9 213 33.558 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD Patl_1611 6e9fb233b47c99e99ab0c738578f2e88 341 Gene3D G3DSA:2.40.30.170 39 273 7.6E-40 T 11-10-2018 Patl_1611 6e9fb233b47c99e99ab0c738578f2e88 341 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 263 1.2E-12 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Patl_1611 6e9fb233b47c99e99ab0c738578f2e88 341 Gene3D G3DSA:1.10.287.470 81 186 7.6E-40 T 11-10-2018 Patl_1611 6e9fb233b47c99e99ab0c738578f2e88 341 SUPERFAMILY SSF111369 41 242 5.23E-13 T 11-10-2018 Patl_1611 6e9fb233b47c99e99ab0c738578f2e88 341 Gene3D G3DSA:2.40.50.100 48 221 7.6E-40 T 11-10-2018 Patl_2063 1668c0d5ac626fce4b29afa42c5cc55b 327 Gene3D G3DSA:3.40.1090.20 2 68 3.1E-9 T 11-10-2018 Patl_2063 1668c0d5ac626fce4b29afa42c5cc55b 327 Gene3D G3DSA:3.40.1090.10 82 232 6.6E-20 T 11-10-2018 Patl_2063 1668c0d5ac626fce4b29afa42c5cc55b 327 Pfam PF01734 Patatin-like phospholipase 6 162 2.6E-21 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Patl_2063 1668c0d5ac626fce4b29afa42c5cc55b 327 ProSitePatterns PS01237 Uncharacterized protein family UPF0028 signature. 8 40 - T 11-10-2018 IPR001423 Lysophospholipase patatin, conserved site GO:0004622|GO:0046470 Reactome: R-HSA-6814848 Patl_2063 1668c0d5ac626fce4b29afa42c5cc55b 327 SUPERFAMILY SSF52151 2 312 5.93E-58 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Patl_1715 dfed2ab0d12a3f584b64637593fbe19f 291 Gene3D G3DSA:3.40.50.10330 22 286 5.9E-94 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Patl_1715 dfed2ab0d12a3f584b64637593fbe19f 291 SUPERFAMILY SSF111331 5 288 1.44E-88 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Patl_1715 dfed2ab0d12a3f584b64637593fbe19f 291 Gene3D G3DSA:2.60.200.30 126 263 5.9E-94 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Patl_1715 dfed2ab0d12a3f584b64637593fbe19f 291 Hamap MF_00361 NAD kinase [nadK]. 4 286 32.554 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Patl_1715 dfed2ab0d12a3f584b64637593fbe19f 291 Pfam PF01513 ATP-NAD kinase 50 270 2.7E-67 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Patl_0896 cd7de307c1c0cadc74b7efc20db1105d 480 Gene3D G3DSA:3.40.309.10 254 445 1.1E-148 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Patl_0896 cd7de307c1c0cadc74b7efc20db1105d 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Patl_0896 cd7de307c1c0cadc74b7efc20db1105d 480 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Patl_0896 cd7de307c1c0cadc74b7efc20db1105d 480 Gene3D G3DSA:3.40.605.10 19 469 1.1E-148 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_0896 cd7de307c1c0cadc74b7efc20db1105d 480 SUPERFAMILY SSF53720 2 472 1.31E-137 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_0896 cd7de307c1c0cadc74b7efc20db1105d 480 Pfam PF00171 Aldehyde dehydrogenase family 19 470 1.8E-142 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Patl_1610 2759fe648cdb42aaa82459850f3c6b05 199 Pfam PF06930 Protein of unknown function (DUF1282) 9 179 1.9E-39 T 11-10-2018 IPR009698 Protein of unknown function DUF1282 Patl_1440 782d6c4e03bbd9f8128a6e24543d1f39 324 Gene3D G3DSA:1.10.10.10 1 84 4.9E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1440 782d6c4e03bbd9f8128a6e24543d1f39 324 Gene3D G3DSA:3.40.190.290 90 294 6.0E-44 T 11-10-2018 Patl_1440 782d6c4e03bbd9f8128a6e24543d1f39 324 Pfam PF03466 LysR substrate binding domain 87 294 2.9E-30 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_1440 782d6c4e03bbd9f8128a6e24543d1f39 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.8E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1440 782d6c4e03bbd9f8128a6e24543d1f39 324 SUPERFAMILY SSF46785 1 85 6.12E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1440 782d6c4e03bbd9f8128a6e24543d1f39 324 SUPERFAMILY SSF53850 89 299 3.62E-31 T 11-10-2018 Patl_1155 e5ca6d42f171b1a341c37573b106fa3d 137 SUPERFAMILY SSF52833 2 134 6.55E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_1155 e5ca6d42f171b1a341c37573b106fa3d 137 ProSitePatterns PS00194 Thioredoxin family active site. 26 44 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Patl_1155 e5ca6d42f171b1a341c37573b106fa3d 137 Pfam PF00578 AhpC/TSA family 2 114 1.0E-23 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_1155 e5ca6d42f171b1a341c37573b106fa3d 137 Gene3D G3DSA:3.40.30.10 1 137 3.7E-37 T 11-10-2018 Patl_0044 c4a1a05dbdc85e5d6a7a95d288c913e5 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 2.8E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_0044 c4a1a05dbdc85e5d6a7a95d288c913e5 197 Gene3D G3DSA:1.10.357.10 8 195 7.7E-65 T 11-10-2018 Patl_0044 c4a1a05dbdc85e5d6a7a95d288c913e5 197 SUPERFAMILY SSF46689 5 76 7.56E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0044 c4a1a05dbdc85e5d6a7a95d288c913e5 197 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 195 40.798 T 11-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 Patl_3809 851c4c629f612e32246b42f82a61ebba 273 SUPERFAMILY SSF51971 4 210 1.41E-20 T 11-10-2018 Patl_3809 851c4c629f612e32246b42f82a61ebba 273 Pfam PF01266 FAD dependent oxidoreductase 9 270 4.3E-19 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Patl_3809 851c4c629f612e32246b42f82a61ebba 273 SUPERFAMILY SSF54373 197 270 4.71E-7 T 11-10-2018 Patl_3809 851c4c629f612e32246b42f82a61ebba 273 Gene3D G3DSA:3.30.9.10 92 270 2.3E-39 T 11-10-2018 Patl_3809 851c4c629f612e32246b42f82a61ebba 273 Gene3D G3DSA:3.40.50.720 10 197 2.3E-39 T 11-10-2018 Patl_3729 d88db1b5f0ae738a7c3baa91f26e558c 242 Gene3D G3DSA:3.90.79.10 11 151 3.4E-30 T 11-10-2018 Patl_3729 d88db1b5f0ae738a7c3baa91f26e558c 242 SUPERFAMILY SSF46785 163 235 9.25E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3729 d88db1b5f0ae738a7c3baa91f26e558c 242 Gene3D G3DSA:1.10.10.10 156 235 2.8E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3729 d88db1b5f0ae738a7c3baa91f26e558c 242 SUPERFAMILY SSF55811 24 159 2.98E-26 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Patl_2728 872a45c1a586842ba80bb69522811cdf 628 Gene3D G3DSA:2.40.170.20 147 625 3.7E-22 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_2728 872a45c1a586842ba80bb69522811cdf 628 SUPERFAMILY SSF56935 62 626 1.41E-35 T 11-10-2018 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 Pfam PF00873 AcrB/AcrD/AcrF family 7 1019 6.9E-164 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 SUPERFAMILY SSF82866 789 1025 2.09E-46 T 11-10-2018 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 SUPERFAMILY SSF82693 143 325 4.45E-12 T 11-10-2018 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 SUPERFAMILY SSF82714 184 264 3.01E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 SUPERFAMILY SSF82866 289 491 8.37E-38 T 11-10-2018 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 Gene3D G3DSA:1.20.1640.10 13 509 1.0E-250 T 11-10-2018 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 Gene3D G3DSA:3.30.70.1440 654 849 1.0E-250 T 11-10-2018 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 SUPERFAMILY SSF82693 42 133 7.5E-20 T 11-10-2018 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 Gene3D G3DSA:3.30.2090.10 178 268 1.0E-250 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 Gene3D G3DSA:1.20.1640.10 510 1018 1.0E-250 T 11-10-2018 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 Gene3D G3DSA:3.30.70.1430 565 653 1.0E-250 T 11-10-2018 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 Gene3D G3DSA:3.30.70.1320 135 327 1.0E-250 T 11-10-2018 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 Gene3D G3DSA:3.30.70.1430 41 799 1.0E-250 T 11-10-2018 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 Gene3D G3DSA:3.30.2090.10 703 791 1.0E-250 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.9E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.9E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.9E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.9E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.9E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_0619 db1f601951df85f1549e79daf7ef0966 1045 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.9E-24 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Patl_2003 de0c7010ec6bb0695c89896c0f6930c3 335 Gene3D G3DSA:3.20.20.70 1 334 3.7E-131 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2003 de0c7010ec6bb0695c89896c0f6930c3 335 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Patl_2003 de0c7010ec6bb0695c89896c0f6930c3 335 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 334 4.0E-135 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Patl_2003 de0c7010ec6bb0695c89896c0f6930c3 335 PIRSF PIRSF000164 14 335 7.6E-98 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Patl_2003 de0c7010ec6bb0695c89896c0f6930c3 335 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 335 48.05 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 Patl_2003 de0c7010ec6bb0695c89896c0f6930c3 335 SUPERFAMILY SSF51395 1 335 2.97E-98 T 11-10-2018 Patl_2003 de0c7010ec6bb0695c89896c0f6930c3 335 Pfam PF01180 Dihydroorotate dehydrogenase 46 335 1.1E-87 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Patl_1327 1c1570f1355012b28bc05f9afe848e52 242 Pfam PF07103 Protein of unknown function (DUF1365) 5 237 6.7E-66 T 11-10-2018 IPR010775 Protein of unknown function DUF1365 Patl_3294 211cc18f7449c202aba124b15a186679 125 Pfam PF03788 LrgA family 25 107 1.5E-15 T 11-10-2018 IPR005538 LrgA/CidA family GO:0016021 Patl_4061 c4554594d62772d4150d32ae62269dda 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.1E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_4061 c4554594d62772d4150d32ae62269dda 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 1.1E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_4061 c4554594d62772d4150d32ae62269dda 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.1E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_4061 c4554594d62772d4150d32ae62269dda 253 Gene3D G3DSA:3.40.50.720 2 253 7.8E-39 T 11-10-2018 Patl_4061 c4554594d62772d4150d32ae62269dda 253 SUPERFAMILY SSF51735 6 253 8.51E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_4061 c4554594d62772d4150d32ae62269dda 253 Pfam PF00106 short chain dehydrogenase 7 211 2.5E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3035 1b19b0661964d50be7076df2ce2ed257 259 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 255 4.8E-67 T 11-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 Patl_3035 1b19b0661964d50be7076df2ce2ed257 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 7.9E-18 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Patl_3035 1b19b0661964d50be7076df2ce2ed257 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 7.9E-18 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Patl_3035 1b19b0661964d50be7076df2ce2ed257 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 7.9E-18 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Patl_3035 1b19b0661964d50be7076df2ce2ed257 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 7.9E-18 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Patl_3035 1b19b0661964d50be7076df2ce2ed257 259 Pfam PF01311 Bacterial export proteins, family 1 15 245 3.7E-62 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Patl_0875 f091263e1e796db2ac67630be4ea9883 403 Gene3D G3DSA:1.20.1250.20 14 395 3.7E-49 T 11-10-2018 Patl_0875 f091263e1e796db2ac67630be4ea9883 403 SUPERFAMILY SSF103473 21 398 1.28E-54 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_0875 f091263e1e796db2ac67630be4ea9883 403 Pfam PF07690 Major Facilitator Superfamily 26 276 4.2E-27 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_0875 f091263e1e796db2ac67630be4ea9883 403 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Patl_0875 f091263e1e796db2ac67630be4ea9883 403 PRINTS PR01035 Tetracycline resistance protein signature 365 388 1.6E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Patl_0875 f091263e1e796db2ac67630be4ea9883 403 PRINTS PR01035 Tetracycline resistance protein signature 61 80 1.6E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Patl_0875 f091263e1e796db2ac67630be4ea9883 403 PRINTS PR01035 Tetracycline resistance protein signature 120 141 1.6E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Patl_0875 f091263e1e796db2ac67630be4ea9883 403 PRINTS PR01035 Tetracycline resistance protein signature 32 48 1.6E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Patl_0875 f091263e1e796db2ac67630be4ea9883 403 PRINTS PR01035 Tetracycline resistance protein signature 150 172 1.6E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 Patl_0290 189cec793a119c3a406766f710ab21f1 379 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 118 1.5E-21 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Patl_0290 189cec793a119c3a406766f710ab21f1 379 SUPERFAMILY SSF51735 3 152 1.81E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0290 189cec793a119c3a406766f710ab21f1 379 Gene3D G3DSA:3.40.50.720 3 124 2.2E-26 T 11-10-2018 Patl_0290 189cec793a119c3a406766f710ab21f1 379 Gene3D G3DSA:3.30.360.10 125 375 7.5E-24 T 11-10-2018 Patl_0290 189cec793a119c3a406766f710ab21f1 379 SUPERFAMILY SSF55347 129 315 3.27E-18 T 11-10-2018 Patl_1767 c693f61a96c4f2798eec9a0a23425029 239 Pfam PF11750 Protein of unknown function (DUF3307) 3 123 2.0E-33 T 11-10-2018 IPR021737 Bacteriophage phiKZ, Orf197 Patl_3514 d86bc950227a6eaf53f83cc5ff23561b 390 PRINTS PR00423 Cell division protein FtsZ signature 189 211 1.4E-51 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Patl_3514 d86bc950227a6eaf53f83cc5ff23561b 390 PRINTS PR00423 Cell division protein FtsZ signature 126 147 1.4E-51 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Patl_3514 d86bc950227a6eaf53f83cc5ff23561b 390 PRINTS PR00423 Cell division protein FtsZ signature 212 233 1.4E-51 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Patl_3514 d86bc950227a6eaf53f83cc5ff23561b 390 PRINTS PR00423 Cell division protein FtsZ signature 98 118 1.4E-51 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Patl_3514 d86bc950227a6eaf53f83cc5ff23561b 390 SUPERFAMILY SSF52490 14 205 7.59E-70 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Patl_3514 d86bc950227a6eaf53f83cc5ff23561b 390 SMART SM00864 13 205 2.2E-113 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Patl_3514 d86bc950227a6eaf53f83cc5ff23561b 390 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 341 3.8E-137 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Patl_3514 d86bc950227a6eaf53f83cc5ff23561b 390 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 373 37.798 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Patl_3514 d86bc950227a6eaf53f83cc5ff23561b 390 Pfam PF12327 FtsZ family, C-terminal domain 222 316 4.8E-35 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Patl_3514 d86bc950227a6eaf53f83cc5ff23561b 390 Gene3D G3DSA:3.30.1330.20 221 328 4.8E-33 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 Patl_3514 d86bc950227a6eaf53f83cc5ff23561b 390 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Patl_3514 d86bc950227a6eaf53f83cc5ff23561b 390 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 8.0E-42 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Patl_3514 d86bc950227a6eaf53f83cc5ff23561b 390 SUPERFAMILY SSF55307 204 320 2.29E-40 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Patl_3514 d86bc950227a6eaf53f83cc5ff23561b 390 Gene3D G3DSA:3.40.50.1440 3 220 7.2E-81 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Patl_3514 d86bc950227a6eaf53f83cc5ff23561b 390 SMART SM00865 207 325 7.9E-53 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Patl_2368 304a97535a402ce34a498b2ac53a1a12 176 SMART SM00731 22 171 8.7E-44 T 11-10-2018 IPR006640 SprT-like Patl_2368 304a97535a402ce34a498b2ac53a1a12 176 Pfam PF17283 SprT-like zinc ribbon domain 131 170 5.7E-10 T 11-10-2018 IPR035240 SprT-like, zinc ribbon domain Patl_2368 304a97535a402ce34a498b2ac53a1a12 176 Pfam PF10263 SprT-like family 27 124 4.4E-18 T 11-10-2018 IPR006640 SprT-like Patl_2789 4a5062488627c9b8c4d3eded595522db 333 PIRSF PIRSF026760 3 332 6.9E-89 T 11-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 Patl_2789 4a5062488627c9b8c4d3eded595522db 333 Gene3D G3DSA:3.40.50.720 51 127 1.2E-21 T 11-10-2018 Patl_2789 4a5062488627c9b8c4d3eded595522db 333 Gene3D G3DSA:3.40.50.300 128 332 4.4E-71 T 11-10-2018 Patl_2789 4a5062488627c9b8c4d3eded595522db 333 SUPERFAMILY SSF52540 3 331 4.09E-102 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2789 4a5062488627c9b8c4d3eded595522db 333 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 40 125 2.8E-25 T 11-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain Patl_2789 4a5062488627c9b8c4d3eded595522db 333 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 132 328 3.1E-72 T 11-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop Patl_1651 dfabb7936da8b4e09cccd62de05e4503 304 PIRSF PIRSF002936 2 304 7.0E-155 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Patl_1651 dfabb7936da8b4e09cccd62de05e4503 304 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 11 304 1.1E-158 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Patl_1651 dfabb7936da8b4e09cccd62de05e4503 304 Gene3D G3DSA:3.40.50.620 9 214 7.3E-62 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_1651 dfabb7936da8b4e09cccd62de05e4503 304 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 6 304 56.818 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 Patl_1651 dfabb7936da8b4e09cccd62de05e4503 304 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 259 2.5E-61 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Patl_1651 dfabb7936da8b4e09cccd62de05e4503 304 SUPERFAMILY SSF52402 7 211 8.61E-71 T 11-10-2018 Patl_2087 3ecd669019fc8ae03bddf08529cc52f4 372 PIRSF PIRSF000532 7 358 3.4E-112 T 11-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Patl_2087 3ecd669019fc8ae03bddf08529cc52f4 372 ProSitePatterns PS00433 Phosphofructokinase signature. 276 294 - T 11-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2087 3ecd669019fc8ae03bddf08529cc52f4 372 Pfam PF00365 Phosphofructokinase 10 307 2.5E-94 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2087 3ecd669019fc8ae03bddf08529cc52f4 372 Gene3D G3DSA:3.40.50.450 11 332 5.4E-99 T 11-10-2018 Patl_2087 3ecd669019fc8ae03bddf08529cc52f4 372 Gene3D G3DSA:3.40.50.460 151 288 5.4E-99 T 11-10-2018 Patl_2087 3ecd669019fc8ae03bddf08529cc52f4 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 222 234 3.6E-69 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2087 3ecd669019fc8ae03bddf08529cc52f4 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 187 204 3.6E-69 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2087 3ecd669019fc8ae03bddf08529cc52f4 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 131 148 3.6E-69 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2087 3ecd669019fc8ae03bddf08529cc52f4 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 169 185 3.6E-69 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2087 3ecd669019fc8ae03bddf08529cc52f4 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 149 167 3.6E-69 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2087 3ecd669019fc8ae03bddf08529cc52f4 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 272 294 3.6E-69 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2087 3ecd669019fc8ae03bddf08529cc52f4 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 104 120 3.6E-69 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2087 3ecd669019fc8ae03bddf08529cc52f4 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 13 32 3.6E-69 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2087 3ecd669019fc8ae03bddf08529cc52f4 372 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 39 52 3.6E-69 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_2087 3ecd669019fc8ae03bddf08529cc52f4 372 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 9 357 38.881 T 11-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Patl_2087 3ecd669019fc8ae03bddf08529cc52f4 372 SUPERFAMILY SSF53784 5 346 1.7E-106 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_3383 334f1d5c06339861c276a3fe3f8d615e 404 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 1.1E-42 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Patl_3383 334f1d5c06339861c276a3fe3f8d615e 404 SUPERFAMILY SSF53901 213 402 3.33E-60 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_3383 334f1d5c06339861c276a3fe3f8d615e 404 SMART SM00825 Beta-ketoacyl synthase 4 404 3.3E-13 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Patl_3383 334f1d5c06339861c276a3fe3f8d615e 404 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site Patl_3383 334f1d5c06339861c276a3fe3f8d615e 404 SUPERFAMILY SSF53901 1 251 1.73E-64 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_3383 334f1d5c06339861c276a3fe3f8d615e 404 Gene3D G3DSA:3.40.47.10 1 253 1.8E-64 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_3383 334f1d5c06339861c276a3fe3f8d615e 404 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 1.5E-27 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Patl_3383 334f1d5c06339861c276a3fe3f8d615e 404 Gene3D G3DSA:3.40.47.10 258 404 5.9E-48 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_3553 98770e4d90bea9243c9c554d8f6b0a95 238 SUPERFAMILY SSF46785 1 61 8.3E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3553 98770e4d90bea9243c9c554d8f6b0a95 238 Pfam PF08279 HTH domain 6 59 1.1E-16 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 Patl_3553 98770e4d90bea9243c9c554d8f6b0a95 238 Gene3D G3DSA:1.10.10.10 1 63 5.7E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3553 98770e4d90bea9243c9c554d8f6b0a95 238 Pfam PF13280 WYL domain 138 227 3.8E-17 T 11-10-2018 IPR026881 WYL domain Patl_4238 137cd4773978f6be2630bdec94c2ea37 305 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 19 300 19.927 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Patl_4238 137cd4773978f6be2630bdec94c2ea37 305 Gene3D G3DSA:1.10.357.140 26 188 1.1E-23 T 11-10-2018 Patl_4238 137cd4773978f6be2630bdec94c2ea37 305 Pfam PF01040 UbiA prenyltransferase family 35 284 4.2E-65 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Patl_4238 137cd4773978f6be2630bdec94c2ea37 305 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 74 96 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site Patl_4238 137cd4773978f6be2630bdec94c2ea37 305 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 21 299 2.9E-102 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Patl_3431 3db65a9acde4139f0ab9d449cf9f794b 784 Pfam PF04055 Radical SAM superfamily 403 608 6.1E-20 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Patl_3431 3db65a9acde4139f0ab9d449cf9f794b 784 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 403 423 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Patl_3431 3db65a9acde4139f0ab9d449cf9f794b 784 SMART SM00729 399 652 1.4E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Patl_3431 3db65a9acde4139f0ab9d449cf9f794b 784 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 43 667 5.0E-261 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 Patl_3431 3db65a9acde4139f0ab9d449cf9f794b 784 Pfam PF08497 Radical SAM N-terminal 43 402 3.8E-142 T 11-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal Patl_3431 3db65a9acde4139f0ab9d449cf9f794b 784 SUPERFAMILY SSF102114 402 673 1.22E-10 T 11-10-2018 Patl_3431 3db65a9acde4139f0ab9d449cf9f794b 784 Pfam PF11842 Domain of unknown function (DUF3362) 617 756 1.4E-48 T 11-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal Patl_3431 3db65a9acde4139f0ab9d449cf9f794b 784 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 43 669 48.849 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 Patl_3431 3db65a9acde4139f0ab9d449cf9f794b 784 Gene3D G3DSA:3.80.30.20 398 666 7.2E-15 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Patl_3772 27271a4cd674dd1ff910816356d19f79 285 SUPERFAMILY SSF51197 34 278 1.99E-56 T 11-10-2018 Patl_3772 27271a4cd674dd1ff910816356d19f79 285 Gene3D G3DSA:2.60.120.620 31 280 1.9E-64 T 11-10-2018 Patl_3772 27271a4cd674dd1ff910816356d19f79 285 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 46 223 2.3E-27 T 11-10-2018 IPR008775 Phytanoyl-CoA dioxygenase Patl_3994 efdbc3dedcdbaf37d7ffea7e1d68a0c7 350 SUPERFAMILY SSF51430 1 348 2.36E-91 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Patl_3994 efdbc3dedcdbaf37d7ffea7e1d68a0c7 350 Pfam PF00248 Aldo/keto reductase family 16 337 9.0E-65 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain Patl_3994 efdbc3dedcdbaf37d7ffea7e1d68a0c7 350 Gene3D G3DSA:3.20.20.100 1 350 9.2E-108 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Patl_1257 437c372341e30e2e6f12253735c3265e 824 Pfam PF07244 Surface antigen variable number repeat 179 266 1.3E-12 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Patl_1257 437c372341e30e2e6f12253735c3265e 824 Pfam PF07244 Surface antigen variable number repeat 95 175 1.1E-9 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Patl_1257 437c372341e30e2e6f12253735c3265e 824 Pfam PF07244 Surface antigen variable number repeat 350 424 1.1E-10 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Patl_1257 437c372341e30e2e6f12253735c3265e 824 Pfam PF07244 Surface antigen variable number repeat 269 347 2.1E-10 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 Patl_1257 437c372341e30e2e6f12253735c3265e 824 Gene3D G3DSA:3.10.20.310 178 267 1.8E-22 T 11-10-2018 Patl_1257 437c372341e30e2e6f12253735c3265e 824 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 824 23.913 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Patl_1257 437c372341e30e2e6f12253735c3265e 824 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 27 824 4.7E-257 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Patl_1257 437c372341e30e2e6f12253735c3265e 824 Gene3D G3DSA:3.10.20.310 95 175 2.4E-14 T 11-10-2018 Patl_1257 437c372341e30e2e6f12253735c3265e 824 PIRSF PIRSF006076 1 824 1.0E-227 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 Patl_1257 437c372341e30e2e6f12253735c3265e 824 Pfam PF01103 Surface antigen 451 824 3.6E-78 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 Patl_1257 437c372341e30e2e6f12253735c3265e 824 Gene3D G3DSA:2.40.160.50 429 824 1.5E-109 T 11-10-2018 Patl_1257 437c372341e30e2e6f12253735c3265e 824 Gene3D G3DSA:3.10.20.310 349 424 1.4E-18 T 11-10-2018 Patl_1257 437c372341e30e2e6f12253735c3265e 824 Gene3D G3DSA:3.10.20.310 21 94 9.1E-18 T 11-10-2018 Patl_1257 437c372341e30e2e6f12253735c3265e 824 Gene3D G3DSA:3.10.20.310 268 348 6.3E-16 T 11-10-2018 Patl_3921 84ce01fbc8895e3014bcf92963c6e871 274 PRINTS PR01021 OMPA domain signature 189 204 1.3E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Patl_3921 84ce01fbc8895e3014bcf92963c6e871 274 PRINTS PR01021 OMPA domain signature 204 220 1.3E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Patl_3921 84ce01fbc8895e3014bcf92963c6e871 274 PRINTS PR01021 OMPA domain signature 159 181 1.3E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 Patl_3921 84ce01fbc8895e3014bcf92963c6e871 274 Pfam PF00691 OmpA family 159 247 7.5E-19 T 11-10-2018 IPR006665 OmpA-like domain Patl_3921 84ce01fbc8895e3014bcf92963c6e871 274 TIGRFAM TIGR03789 pdsO: proteobacterial sortase system peptidoglycan-associated protein 2 259 7.3E-103 T 11-10-2018 IPR022511 Proteobacterial sortase system peptidoglycan-associated protein Patl_3921 84ce01fbc8895e3014bcf92963c6e871 274 Gene3D G3DSA:3.30.1330.60 124 267 4.3E-26 T 11-10-2018 IPR036737 OmpA-like domain superfamily Patl_3921 84ce01fbc8895e3014bcf92963c6e871 274 ProSitePatterns PS01068 OmpA-like domain. 191 235 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 Patl_3921 84ce01fbc8895e3014bcf92963c6e871 274 SUPERFAMILY SSF103088 152 261 3.66E-26 T 11-10-2018 IPR036737 OmpA-like domain superfamily Patl_3682 3280e82eb172fb1711550a547f0a88e6 546 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 435 503 5.5E-11 T 11-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Patl_3682 3280e82eb172fb1711550a547f0a88e6 546 Gene3D G3DSA:3.50.50.60 18 383 1.7E-96 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3682 3280e82eb172fb1711550a547f0a88e6 546 Gene3D G3DSA:3.30.9.10 95 338 1.7E-96 T 11-10-2018 Patl_3682 3280e82eb172fb1711550a547f0a88e6 546 Pfam PF01266 FAD dependent oxidoreductase 18 337 1.3E-27 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Patl_3682 3280e82eb172fb1711550a547f0a88e6 546 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 46 58 7.3E-10 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Patl_3682 3280e82eb172fb1711550a547f0a88e6 546 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 365 377 7.3E-10 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Patl_3682 3280e82eb172fb1711550a547f0a88e6 546 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 29 7.3E-10 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Patl_3682 3280e82eb172fb1711550a547f0a88e6 546 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 331 337 7.3E-10 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Patl_3682 3280e82eb172fb1711550a547f0a88e6 546 SUPERFAMILY SSF51905 16 309 1.13E-22 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3682 3280e82eb172fb1711550a547f0a88e6 546 Gene3D G3DSA:1.10.8.870 422 544 3.7E-12 T 11-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Patl_2921 9bb9764ccb9d2d1098368a818f9dadd8 414 Pfam PF00266 Aminotransferase class-V 72 351 3.6E-25 T 11-10-2018 IPR000192 Aminotransferase class V domain Patl_2921 9bb9764ccb9d2d1098368a818f9dadd8 414 Gene3D G3DSA:3.90.1150.10 13 397 1.7E-145 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_2921 9bb9764ccb9d2d1098368a818f9dadd8 414 TIGRFAM TIGR01814 kynureninase: kynureninase 12 397 1.4E-92 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 Patl_2921 9bb9764ccb9d2d1098368a818f9dadd8 414 PIRSF PIRSF038800 1 405 2.1E-150 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 Patl_2921 9bb9764ccb9d2d1098368a818f9dadd8 414 SUPERFAMILY SSF53383 10 398 7.34E-81 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_2921 9bb9764ccb9d2d1098368a818f9dadd8 414 Hamap MF_01970 Kynureninase [kynU]. 1 397 32.193 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 Patl_2921 9bb9764ccb9d2d1098368a818f9dadd8 414 Gene3D G3DSA:3.40.640.10 43 301 1.7E-145 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_0203 0dd7233ca3e73ca47c4683a3233a81e9 700 SUPERFAMILY SSF56935 80 698 1.83E-84 T 11-10-2018 Patl_0203 0dd7233ca3e73ca47c4683a3233a81e9 700 Gene3D G3DSA:2.170.130.10 79 206 4.8E-26 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_0203 0dd7233ca3e73ca47c4683a3233a81e9 700 Pfam PF07715 TonB-dependent Receptor Plug Domain 95 202 5.2E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0203 0dd7233ca3e73ca47c4683a3233a81e9 700 Pfam PF00593 TonB dependent receptor 238 677 3.2E-28 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0203 0dd7233ca3e73ca47c4683a3233a81e9 700 Gene3D G3DSA:2.40.170.20 218 698 1.5E-44 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_2907 fe54e993c1e30a540fad4741e2433dfe 359 Pfam PF14240 YHYH protein 206 281 3.5E-9 T 11-10-2018 IPR025924 YHYH domain Patl_3969 eac469bb553eaea097792ddd1c6b96b2 216 SUPERFAMILY SSF51735 5 206 2.4E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3969 eac469bb553eaea097792ddd1c6b96b2 216 Pfam PF13460 NAD(P)H-binding 11 129 1.4E-8 T 11-10-2018 IPR016040 NAD(P)-binding domain Patl_3969 eac469bb553eaea097792ddd1c6b96b2 216 Gene3D G3DSA:3.40.50.720 1 209 1.9E-52 T 11-10-2018 Patl_3452 2a3e56590d7184d4dbb12f10f3181a93 519 SUPERFAMILY SSF52540 1 310 1.41E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3452 2a3e56590d7184d4dbb12f10f3181a93 519 Gene3D G3DSA:3.40.50.300 3 345 4.8E-25 T 11-10-2018 Patl_3452 2a3e56590d7184d4dbb12f10f3181a93 519 Pfam PF13175 AAA ATPase domain 153 304 2.5E-12 T 11-10-2018 Patl_3452 2a3e56590d7184d4dbb12f10f3181a93 519 Pfam PF13175 AAA ATPase domain 3 83 1.8E-12 T 11-10-2018 Patl_1120 3629747b74cb440a7ee1c0553df118e4 107 Pfam PF14330 Domain of unknown function (DUF4387) 7 103 1.6E-36 T 11-10-2018 IPR025496 Protein of unknown function DUF4387 Patl_1390 be8464fe44916606daad0ad5a9bd5392 164 Pfam PF01863 Protein of unknown function DUF45 93 151 6.6E-13 T 11-10-2018 IPR002725 Protein of unknown function DUF45 Patl_1390 be8464fe44916606daad0ad5a9bd5392 164 Gene3D G3DSA:3.30.2010.10 70 159 3.1E-7 T 11-10-2018 Patl_2642 80331027ed73e900d766ffac7407b628 782 Gene3D G3DSA:2.60.120.430 52 230 1.4E-50 T 11-10-2018 Patl_2642 80331027ed73e900d766ffac7407b628 782 Pfam PF02449 Beta-galactosidase 490 660 7.7E-6 T 11-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_2642 80331027ed73e900d766ffac7407b628 782 SUPERFAMILY SSF51445 432 765 1.17E-26 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_2642 80331027ed73e900d766ffac7407b628 782 Gene3D G3DSA:3.20.20.80 232 775 8.9E-188 T 11-10-2018 Patl_1707 c907dd113d2abc198e3ccdb6b8103cac 447 Pfam PF01474 Class-II DAHP synthetase family 4 441 2.1E-208 T 11-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Patl_1707 c907dd113d2abc198e3ccdb6b8103cac 447 SUPERFAMILY SSF51569 2 445 8.06E-202 T 11-10-2018 Patl_1707 c907dd113d2abc198e3ccdb6b8103cac 447 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 4 445 6.1E-213 T 11-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Patl_0986 a55f2ea334056f3e1ea7f3d1c5578edf 282 Gene3D G3DSA:1.20.120.1490 160 275 2.2E-11 T 11-10-2018 Patl_0986 a55f2ea334056f3e1ea7f3d1c5578edf 282 Gene3D G3DSA:1.20.120.1490 31 136 2.8E-12 T 11-10-2018 Patl_0986 a55f2ea334056f3e1ea7f3d1c5578edf 282 Pfam PF07813 LTXXQ motif family protein 163 260 6.6E-8 T 11-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 Patl_1791 b2ad7b4895f6d8be791378350acec584 263 Gene3D G3DSA:3.40.50.720 1 263 6.9E-104 T 11-10-2018 Patl_1791 b2ad7b4895f6d8be791378350acec584 263 Pfam PF00899 ThiF family 18 255 3.9E-37 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Patl_1791 b2ad7b4895f6d8be791378350acec584 263 SUPERFAMILY SSF69572 6 257 1.83E-66 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Patl_3342 f15a836153892863223f547cbab68465 300 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 222 1.4E-29 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Patl_3342 f15a836153892863223f547cbab68465 300 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 235 250 1.4E-29 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Patl_3342 f15a836153892863223f547cbab68465 300 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 155 172 1.4E-29 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Patl_3342 f15a836153892863223f547cbab68465 300 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 223 234 1.4E-29 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial Patl_3342 f15a836153892863223f547cbab68465 300 Pfam PF01478 Type IV leader peptidase family 147 255 1.8E-26 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Patl_3342 f15a836153892863223f547cbab68465 300 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 21 136 2.7E-35 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal Patl_3335 7d8a1daa8c65bc3a26711cbf4c7bcba0 464 Gene3D G3DSA:1.10.287.130 210 302 2.0E-10 T 11-10-2018 Patl_3335 7d8a1daa8c65bc3a26711cbf4c7bcba0 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 463 8.3E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3335 7d8a1daa8c65bc3a26711cbf4c7bcba0 464 SMART SM00065 27 178 0.0055 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_3335 7d8a1daa8c65bc3a26711cbf4c7bcba0 464 Gene3D G3DSA:3.30.565.10 303 464 3.2E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3335 7d8a1daa8c65bc3a26711cbf4c7bcba0 464 SUPERFAMILY SSF55781 30 180 9.81E-8 T 11-10-2018 Patl_3335 7d8a1daa8c65bc3a26711cbf4c7bcba0 464 Gene3D G3DSA:3.30.450.40 18 190 1.2E-7 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_3335 7d8a1daa8c65bc3a26711cbf4c7bcba0 464 SMART SM00387 350 464 2.0E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_3335 7d8a1daa8c65bc3a26711cbf4c7bcba0 464 SUPERFAMILY SSF55874 299 464 4.19E-23 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_3164 acd7c2a74ded31a6fbae5afe8d9b741c 554 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 24 4.7E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_3164 acd7c2a74ded31a6fbae5afe8d9b741c 554 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 3.4E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_2821 b36ad86d0ecaa09e430de3e3f5d642e5 200 SUPERFAMILY SSF52091 1 108 2.0E-22 T 11-10-2018 IPR036513 STAS domain superfamily Patl_2821 b36ad86d0ecaa09e430de3e3f5d642e5 200 Pfam PF11964 SpoIIAA-like 13 110 5.7E-10 T 11-10-2018 IPR021866 SpoIIAA-like Patl_2821 b36ad86d0ecaa09e430de3e3f5d642e5 200 Gene3D G3DSA:3.40.50.10600 2 116 4.7E-15 T 11-10-2018 IPR038396 SpoIIAA-like superfamily Patl_1763 afa56feb00fb24e79c5272d73f1b2047 179 Pfam PF00857 Isochorismatase family 7 156 1.2E-30 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 Patl_1763 afa56feb00fb24e79c5272d73f1b2047 179 SUPERFAMILY SSF52499 2 179 6.41E-45 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Patl_1763 afa56feb00fb24e79c5272d73f1b2047 179 Gene3D G3DSA:3.40.50.850 1 179 4.5E-49 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Patl_2981 bd42b6a5c499c2cfa9cb3419dd3df800 250 Pfam PF01925 Sulfite exporter TauE/SafE 18 248 7.1E-26 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Patl_4259 28f3109c51a3190598f79e559729402a 179 SUPERFAMILY SSF53254 45 151 3.54E-14 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Patl_4259 28f3109c51a3190598f79e559729402a 179 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 55 108 4.2E-9 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Patl_4259 28f3109c51a3190598f79e559729402a 179 Gene3D G3DSA:3.40.50.1240 45 177 4.4E-15 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Patl_3401 15bd474cd90506e0c611f9bc6bbad5d2 165 Pfam PF14317 YcxB-like protein 98 153 6.6E-6 T 11-10-2018 IPR025588 YcxB-like protein Patl_1719 4bda466c1489fa780bd3882aa305aac1 332 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.6E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1719 4bda466c1489fa780bd3882aa305aac1 332 SUPERFAMILY SSF53850 89 306 8.69E-27 T 11-10-2018 Patl_1719 4bda466c1489fa780bd3882aa305aac1 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1719 4bda466c1489fa780bd3882aa305aac1 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1719 4bda466c1489fa780bd3882aa305aac1 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.2E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1719 4bda466c1489fa780bd3882aa305aac1 332 Gene3D G3DSA:1.10.10.10 1 90 3.6E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1719 4bda466c1489fa780bd3882aa305aac1 332 Pfam PF03466 LysR substrate binding domain 90 300 3.1E-24 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_1719 4bda466c1489fa780bd3882aa305aac1 332 Gene3D G3DSA:3.40.190.290 91 308 1.7E-26 T 11-10-2018 Patl_1719 4bda466c1489fa780bd3882aa305aac1 332 SUPERFAMILY SSF46785 1 82 7.07E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0458 935e9299446b58145a76cb4fb856ac5f 341 Pfam PF02424 ApbE family 38 316 1.5E-82 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Patl_0458 935e9299446b58145a76cb4fb856ac5f 341 SUPERFAMILY SSF143631 32 338 7.85E-98 T 11-10-2018 IPR003374 ApbE-like superfamily Patl_0458 935e9299446b58145a76cb4fb856ac5f 341 PIRSF PIRSF006268 5 340 4.0E-94 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Patl_0458 935e9299446b58145a76cb4fb856ac5f 341 Gene3D G3DSA:3.10.520.20 21 341 2.3E-112 T 11-10-2018 Patl_0200 0e6bd4073cf15a8417686997f2da5ca6 637 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 495 523 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Patl_0200 0e6bd4073cf15a8417686997f2da5ca6 637 Gene3D G3DSA:1.25.20.10 20 381 2.0E-92 T 11-10-2018 Patl_0200 0e6bd4073cf15a8417686997f2da5ca6 637 Gene3D G3DSA:1.10.530.10 467 630 8.6E-47 T 11-10-2018 Patl_0200 0e6bd4073cf15a8417686997f2da5ca6 637 Pfam PF01464 Transglycosylase SLT domain 480 584 6.5E-26 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 Patl_0200 0e6bd4073cf15a8417686997f2da5ca6 637 SUPERFAMILY SSF53955 440 616 3.56E-44 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Patl_0200 0e6bd4073cf15a8417686997f2da5ca6 637 SUPERFAMILY SSF48435 21 471 1.44E-111 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 Patl_0200 0e6bd4073cf15a8417686997f2da5ca6 637 Pfam PF14718 Soluble lytic murein transglycosylase L domain 400 466 4.5E-21 T 11-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 Patl_1510 0cd76f0621b1485b1a00f95f715d1340 449 SUPERFAMILY SSF103378 18 427 4.97E-96 T 11-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 Patl_1510 0cd76f0621b1485b1a00f95f715d1340 449 Gene3D G3DSA:1.10.4100.10 24 409 2.7E-97 T 11-10-2018 Patl_1510 0cd76f0621b1485b1a00f95f715d1340 449 Pfam PF03972 MmgE/PrpD family 19 417 2.4E-107 T 11-10-2018 IPR005656 MmgE/PrpD GO:0016829 Patl_1510 0cd76f0621b1485b1a00f95f715d1340 449 Gene3D G3DSA:3.30.1330.120 262 393 2.7E-97 T 11-10-2018 Patl_2125 cbd2b6d9800b470c63ccf77446f9fe08 341 SUPERFAMILY SSF53659 4 338 5.76E-103 T 11-10-2018 Patl_2125 cbd2b6d9800b470c63ccf77446f9fe08 341 PIRSF PIRSF002465 2 340 1.8E-120 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Patl_2125 cbd2b6d9800b470c63ccf77446f9fe08 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 341 132.66 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Patl_2125 cbd2b6d9800b470c63ccf77446f9fe08 341 Pfam PF02504 Fatty acid synthesis protein 5 327 3.3E-99 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Patl_2125 cbd2b6d9800b470c63ccf77446f9fe08 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 337 6.6E-107 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Patl_2125 cbd2b6d9800b470c63ccf77446f9fe08 341 Gene3D G3DSA:3.40.718.10 3 340 1.0E-123 T 11-10-2018 Patl_3540 490fc0d6a8d5789e4c9954bd5cf6cccf 478 Pfam PF07550 Protein of unknown function (DUF1533) 398 440 8.6E-5 T 11-10-2018 IPR011432 Domain of unknown function DUF1533 Patl_3540 490fc0d6a8d5789e4c9954bd5cf6cccf 478 Gene3D G3DSA:2.60.40.10 162 226 1.2E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_3540 490fc0d6a8d5789e4c9954bd5cf6cccf 478 SUPERFAMILY SSF49785 347 444 4.11E-7 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_3540 490fc0d6a8d5789e4c9954bd5cf6cccf 478 Gene3D G3DSA:2.60.120.260 335 459 4.9E-5 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_2076 89f47ae571039a6070ad762fdc88eb54 159 PIRSF PIRSF002560 1 157 1.6E-61 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2076 89f47ae571039a6070ad762fdc88eb54 159 Pfam PF00210 Ferritin-like domain 9 141 3.1E-31 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Patl_2076 89f47ae571039a6070ad762fdc88eb54 159 SUPERFAMILY SSF47240 2 153 1.56E-45 T 11-10-2018 IPR009078 Ferritin-like superfamily Patl_2076 89f47ae571039a6070ad762fdc88eb54 159 PRINTS PR00601 Bacterioferritin signature 65 85 4.6E-54 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2076 89f47ae571039a6070ad762fdc88eb54 159 PRINTS PR00601 Bacterioferritin signature 128 149 4.6E-54 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2076 89f47ae571039a6070ad762fdc88eb54 159 PRINTS PR00601 Bacterioferritin signature 23 43 4.6E-54 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2076 89f47ae571039a6070ad762fdc88eb54 159 PRINTS PR00601 Bacterioferritin signature 107 127 4.6E-54 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2076 89f47ae571039a6070ad762fdc88eb54 159 PRINTS PR00601 Bacterioferritin signature 86 106 4.6E-54 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2076 89f47ae571039a6070ad762fdc88eb54 159 PRINTS PR00601 Bacterioferritin signature 3 22 4.6E-54 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2076 89f47ae571039a6070ad762fdc88eb54 159 PRINTS PR00601 Bacterioferritin signature 44 64 4.6E-54 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2076 89f47ae571039a6070ad762fdc88eb54 159 Gene3D G3DSA:1.20.1260.10 1 157 2.2E-59 T 11-10-2018 IPR012347 Ferritin-like Patl_2076 89f47ae571039a6070ad762fdc88eb54 159 TIGRFAM TIGR00754 bfr: bacterioferritin 5 156 6.4E-64 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_1003 95ec51f127ea4b6bf2eb0c07e1de1cbb 130 SUPERFAMILY SSF56047 2 129 5.1E-45 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1003 95ec51f127ea4b6bf2eb0c07e1de1cbb 130 Gene3D G3DSA:3.30.1370.30 2 72 1.2E-25 T 11-10-2018 Patl_1003 95ec51f127ea4b6bf2eb0c07e1de1cbb 130 Gene3D G3DSA:3.30.1490.10 73 130 1.2E-23 T 11-10-2018 Patl_1003 95ec51f127ea4b6bf2eb0c07e1de1cbb 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1003 95ec51f127ea4b6bf2eb0c07e1de1cbb 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.82 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_1003 95ec51f127ea4b6bf2eb0c07e1de1cbb 130 Pfam PF00410 Ribosomal protein S8 5 129 3.4E-47 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0933 a4b858650804f60c58971a1ed211a8a2 634 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 119 541 8.1E-82 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Patl_0933 a4b858650804f60c58971a1ed211a8a2 634 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 16 620 4.1E-179 T 11-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ Patl_0124 64ae47544a1ca7eb2d114799294fd4e7 289 SUPERFAMILY SSF53067 3 112 9.87E-22 T 11-10-2018 Patl_0124 64ae47544a1ca7eb2d114799294fd4e7 289 Gene3D G3DSA:3.30.420.40 5 115 2.4E-62 T 11-10-2018 Patl_0124 64ae47544a1ca7eb2d114799294fd4e7 289 Gene3D G3DSA:3.30.420.40 116 260 2.4E-62 T 11-10-2018 Patl_0124 64ae47544a1ca7eb2d114799294fd4e7 289 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 282 3.0E-27 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Patl_0124 64ae47544a1ca7eb2d114799294fd4e7 289 SUPERFAMILY SSF53067 115 285 1.91E-36 T 11-10-2018 Patl_3615 a0292fbf72d21457a5f29480333db1ae 332 Gene3D G3DSA:1.10.1040.10 185 326 1.0E-52 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Patl_3615 a0292fbf72d21457a5f29480333db1ae 332 Gene3D G3DSA:3.40.50.720 1 184 7.5E-51 T 11-10-2018 Patl_3615 a0292fbf72d21457a5f29480333db1ae 332 PIRSF PIRSF000114 1 332 1.5E-99 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Patl_3615 a0292fbf72d21457a5f29480333db1ae 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 7 24 6.0E-40 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Patl_3615 a0292fbf72d21457a5f29480333db1ae 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 6.0E-40 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Patl_3615 a0292fbf72d21457a5f29480333db1ae 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 174 198 6.0E-40 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Patl_3615 a0292fbf72d21457a5f29480333db1ae 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 199 223 6.0E-40 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Patl_3615 a0292fbf72d21457a5f29480333db1ae 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 239 256 6.0E-40 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Patl_3615 a0292fbf72d21457a5f29480333db1ae 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 57 84 6.0E-40 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Patl_3615 a0292fbf72d21457a5f29480333db1ae 332 SUPERFAMILY SSF48179 180 332 3.23E-57 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_3615 a0292fbf72d21457a5f29480333db1ae 332 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 3 323 37.447 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Patl_3615 a0292fbf72d21457a5f29480333db1ae 332 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 160 1.9E-43 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Patl_3615 a0292fbf72d21457a5f29480333db1ae 332 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 181 320 2.5E-53 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Patl_3615 a0292fbf72d21457a5f29480333db1ae 332 SUPERFAMILY SSF51735 5 179 1.26E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3615 a0292fbf72d21457a5f29480333db1ae 332 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 189 210 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Patl_2004 9aae02f45b7be9b436a77d8d8f817318 178 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 178 37.784 T 11-10-2018 IPR009809 Cell division protein ZapC Patl_2004 9aae02f45b7be9b436a77d8d8f817318 178 Pfam PF07126 Cell-division protein ZapC 1 169 1.5E-50 T 11-10-2018 IPR009809 Cell division protein ZapC Patl_2004 9aae02f45b7be9b436a77d8d8f817318 178 PIRSF PIRSF010252 1 178 3.6E-59 T 11-10-2018 IPR009809 Cell division protein ZapC Patl_2522 5ef91dff80d4e910bb0837d3475ef929 195 Pfam PF01694 Rhomboid family 42 187 3.4E-11 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Patl_2522 5ef91dff80d4e910bb0837d3475ef929 195 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 33 184 7.9E-55 T 11-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria Patl_2522 5ef91dff80d4e910bb0837d3475ef929 195 Gene3D G3DSA:1.20.1540.10 9 194 1.8E-18 T 11-10-2018 IPR035952 Rhomboid-like superfamily Patl_2522 5ef91dff80d4e910bb0837d3475ef929 195 SUPERFAMILY SSF144091 9 192 1.02E-28 T 11-10-2018 Patl_2559 ad32bb8f50b6a54208612e776a6310b8 304 Pfam PF13371 Tetratricopeptide repeat 222 293 2.8E-20 T 11-10-2018 Patl_2559 ad32bb8f50b6a54208612e776a6310b8 304 Pfam PF13369 Transglutaminase-like superfamily 35 220 1.2E-25 T 11-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Patl_2559 ad32bb8f50b6a54208612e776a6310b8 304 Gene3D G3DSA:1.25.40.10 200 299 1.7E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_2559 ad32bb8f50b6a54208612e776a6310b8 304 SUPERFAMILY SSF48452 216 289 1.14E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0899 41726f2ab5c5efad077a5f0c73f04f5b 216 Pfam PF01081 KDPG and KHG aldolase 8 189 9.0E-31 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Patl_0899 41726f2ab5c5efad077a5f0c73f04f5b 216 SUPERFAMILY SSF51569 3 208 3.11E-55 T 11-10-2018 Patl_0899 41726f2ab5c5efad077a5f0c73f04f5b 216 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 127 140 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 Patl_0899 41726f2ab5c5efad077a5f0c73f04f5b 216 Gene3D G3DSA:3.20.20.70 9 215 5.7E-58 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_3635 a509912abb8a6796ec507a3f950688f9 751 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 168 2.3E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3635 a509912abb8a6796ec507a3f950688f9 751 SUPERFAMILY SSF56935 38 749 8.49E-108 T 11-10-2018 Patl_3635 a509912abb8a6796ec507a3f950688f9 751 Gene3D G3DSA:2.40.170.20 49 750 1.1E-132 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_3635 a509912abb8a6796ec507a3f950688f9 751 Pfam PF00593 TonB dependent receptor 278 731 2.2E-28 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0483 0a382e5bc9f3ec1b3102f47c8afd97da 142 Gene3D G3DSA:3.40.190.10 22 139 2.9E-13 T 11-10-2018 Patl_0483 0a382e5bc9f3ec1b3102f47c8afd97da 142 SUPERFAMILY SSF53850 23 137 4.34E-13 T 11-10-2018 Patl_2767 48810eea0c9145977fa47922f0126c51 528 SUPERFAMILY SSF56176 9 227 6.54E-50 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Patl_2767 48810eea0c9145977fa47922f0126c51 528 Gene3D G3DSA:3.30.465.10 101 228 2.2E-27 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Patl_2767 48810eea0c9145977fa47922f0126c51 528 Gene3D G3DSA:3.30.43.10 1 100 4.5E-19 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Patl_2767 48810eea0c9145977fa47922f0126c51 528 Pfam PF01565 FAD binding domain 46 186 1.4E-33 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Patl_2767 48810eea0c9145977fa47922f0126c51 528 SUPERFAMILY SSF55103 277 526 8.28E-9 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Patl_2584 80df02ee9717d59d9cf944d2be80030e 777 Pfam PF13620 Carboxypeptidase regulatory-like domain 270 345 1.2E-8 T 11-10-2018 Patl_2584 80df02ee9717d59d9cf944d2be80030e 777 Gene3D G3DSA:2.60.40.1120 354 442 7.2E-6 T 11-10-2018 Patl_2584 80df02ee9717d59d9cf944d2be80030e 777 Gene3D G3DSA:3.20.20.140 443 664 3.3E-30 T 11-10-2018 Patl_2584 80df02ee9717d59d9cf944d2be80030e 777 SUPERFAMILY SSF49452 267 345 1.86E-6 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Patl_2584 80df02ee9717d59d9cf944d2be80030e 777 Gene3D G3DSA:2.60.40.1120 246 347 2.0E-6 T 11-10-2018 Patl_2584 80df02ee9717d59d9cf944d2be80030e 777 SUPERFAMILY SSF89550 451 663 2.75E-26 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Patl_0391 ac41f9b70593b0790202f54254308700 226 Gene3D G3DSA:3.40.50.300 16 219 1.2E-44 T 11-10-2018 Patl_0391 ac41f9b70593b0790202f54254308700 226 SUPERFAMILY SSF52540 19 211 1.28E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0391 ac41f9b70593b0790202f54254308700 226 Pfam PF00005 ABC transporter 21 169 4.8E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_0391 ac41f9b70593b0790202f54254308700 226 SMART SM00382 25 217 7.3E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0391 ac41f9b70593b0790202f54254308700 226 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_3649 a48db907fc59b0d822718ca6845b4b1e 485 PRINTS PR00084 Mannitol dehydrogenase signature 249 264 4.5E-18 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Patl_3649 a48db907fc59b0d822718ca6845b4b1e 485 PRINTS PR00084 Mannitol dehydrogenase signature 219 232 4.5E-18 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Patl_3649 a48db907fc59b0d822718ca6845b4b1e 485 PRINTS PR00084 Mannitol dehydrogenase signature 32 42 4.5E-18 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Patl_3649 a48db907fc59b0d822718ca6845b4b1e 485 PRINTS PR00084 Mannitol dehydrogenase signature 180 193 4.5E-18 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Patl_3649 a48db907fc59b0d822718ca6845b4b1e 485 SUPERFAMILY SSF51735 11 283 1.26E-84 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3649 a48db907fc59b0d822718ca6845b4b1e 485 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 217 431 4.0E-54 T 11-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 Patl_3649 a48db907fc59b0d822718ca6845b4b1e 485 SUPERFAMILY SSF48179 284 480 3.74E-37 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Patl_3649 a48db907fc59b0d822718ca6845b4b1e 485 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 31 189 1.2E-36 T 11-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_3649 a48db907fc59b0d822718ca6845b4b1e 485 Gene3D G3DSA:3.40.50.720 4 282 7.2E-94 T 11-10-2018 Patl_3649 a48db907fc59b0d822718ca6845b4b1e 485 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 219 231 - T 11-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 Patl_3649 a48db907fc59b0d822718ca6845b4b1e 485 Gene3D G3DSA:1.10.1040.10 283 484 9.4E-43 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Patl_1321 9de0d5957562e46c1d666226086968b1 83 PIRSF PIRSF006488 1 83 1.1E-23 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Patl_1321 9de0d5957562e46c1d666226086968b1 83 SUPERFAMILY SSF116842 4 73 4.45E-23 T 11-10-2018 Patl_1321 9de0d5957562e46c1d666226086968b1 83 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 11 66 7.8E-24 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Patl_1321 9de0d5957562e46c1d666226086968b1 83 Gene3D G3DSA:1.10.287.1040 5 83 1.6E-24 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 Patl_1321 9de0d5957562e46c1d666226086968b1 83 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 3 51 3.0E-21 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Patl_1321 9de0d5957562e46c1d666226086968b1 83 Pfam PF02609 Exonuclease VII small subunit 12 63 1.5E-20 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Patl_1321 9de0d5957562e46c1d666226086968b1 83 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 11 71 15.845 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Patl_1933 def019e0205e01dbb5145258d5e96a92 65 Gene3D G3DSA:3.10.20.30 2 65 8.9E-17 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_1933 def019e0205e01dbb5145258d5e96a92 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 65 8.4E-16 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis Patl_1933 def019e0205e01dbb5145258d5e96a92 65 Pfam PF02597 ThiS family 5 65 5.3E-10 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Patl_1933 def019e0205e01dbb5145258d5e96a92 65 SUPERFAMILY SSF54285 3 64 2.47E-13 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Patl_4260 a811a5a48bb513b61b4b1ebd48804d1e 196 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Patl_4260 a811a5a48bb513b61b4b1ebd48804d1e 196 Pfam PF00484 Carbonic anhydrase 37 188 3.1E-49 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Patl_4260 a811a5a48bb513b61b4b1ebd48804d1e 196 SMART SM00947 30 192 6.9E-63 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Patl_4260 a811a5a48bb513b61b4b1ebd48804d1e 196 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Patl_4260 a811a5a48bb513b61b4b1ebd48804d1e 196 SUPERFAMILY SSF53056 1 191 1.16E-69 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Patl_4260 a811a5a48bb513b61b4b1ebd48804d1e 196 Gene3D G3DSA:3.40.1050.10 1 196 1.1E-78 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 Patl_1399 28245c4c497d960c00006bdf0fba108a 211 Gene3D G3DSA:3.30.420.10 6 209 3.7E-51 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Patl_1399 28245c4c497d960c00006bdf0fba108a 211 SUPERFAMILY SSF53098 7 204 5.22E-54 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_1399 28245c4c497d960c00006bdf0fba108a 211 SMART SM00479 16 201 6.3E-27 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Patl_1399 28245c4c497d960c00006bdf0fba108a 211 TIGRFAM TIGR01298 RNaseT: ribonuclease T 8 206 1.6E-92 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 Patl_1399 28245c4c497d960c00006bdf0fba108a 211 Hamap MF_00157 Ribonuclease T [rnt]. 1 211 103.914 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 Patl_1399 28245c4c497d960c00006bdf0fba108a 211 Pfam PF00929 Exonuclease 18 192 4.5E-35 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Patl_3591 6eff56c8d0c8d915aa1d2e99695fdb69 129 SUPERFAMILY SSF51230 3 128 4.27E-46 T 11-10-2018 IPR011053 Single hybrid motif Patl_3591 6eff56c8d0c8d915aa1d2e99695fdb69 129 Gene3D G3DSA:2.40.50.100 2 129 3.0E-52 T 11-10-2018 Patl_3591 6eff56c8d0c8d915aa1d2e99695fdb69 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 41.391 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Patl_3591 6eff56c8d0c8d915aa1d2e99695fdb69 129 Pfam PF01597 Glycine cleavage H-protein 8 128 6.3E-48 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Patl_3591 6eff56c8d0c8d915aa1d2e99695fdb69 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Patl_3591 6eff56c8d0c8d915aa1d2e99695fdb69 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 5.2E-57 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Patl_3334 57b5e226d082c40127823134c1c8bb50 242 Gene3D G3DSA:2.40.240.20 1 70 3.5E-21 T 11-10-2018 Patl_3334 57b5e226d082c40127823134c1c8bb50 242 PIRSF PIRSF015601 2 242 5.1E-61 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Patl_3334 57b5e226d082c40127823134c1c8bb50 242 Gene3D G3DSA:3.40.1280.10 74 242 2.7E-64 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Patl_3334 57b5e226d082c40127823134c1c8bb50 242 Pfam PF04452 RNA methyltransferase 19 237 1.0E-75 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Patl_3334 57b5e226d082c40127823134c1c8bb50 242 SUPERFAMILY SSF75217 75 242 6.11E-55 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Patl_3334 57b5e226d082c40127823134c1c8bb50 242 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 2.2E-72 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Patl_3334 57b5e226d082c40127823134c1c8bb50 242 SUPERFAMILY SSF88697 2 69 2.98E-15 T 11-10-2018 IPR015947 PUA-like superfamily Patl_1342 08eaed808894bb94982b531dcd977818 135 Pfam PF03061 Thioesterase superfamily 19 93 9.9E-12 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Patl_1342 08eaed808894bb94982b531dcd977818 135 SUPERFAMILY SSF54637 3 130 9.91E-24 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_1342 08eaed808894bb94982b531dcd977818 135 Gene3D G3DSA:3.10.129.10 1 128 4.6E-21 T 11-10-2018 Patl_3562 956ca6f725b64592a55a57a3a3caa88c 501 PRINTS PR00481 Cytosol aminopeptidase signature 322 343 3.1E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Patl_3562 956ca6f725b64592a55a57a3a3caa88c 501 PRINTS PR00481 Cytosol aminopeptidase signature 263 280 3.1E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Patl_3562 956ca6f725b64592a55a57a3a3caa88c 501 PRINTS PR00481 Cytosol aminopeptidase signature 344 364 3.1E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Patl_3562 956ca6f725b64592a55a57a3a3caa88c 501 PRINTS PR00481 Cytosol aminopeptidase signature 285 306 3.1E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Patl_3562 956ca6f725b64592a55a57a3a3caa88c 501 PRINTS PR00481 Cytosol aminopeptidase signature 372 387 3.1E-54 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Patl_3562 956ca6f725b64592a55a57a3a3caa88c 501 Gene3D G3DSA:3.40.220.10 1 159 3.5E-56 T 11-10-2018 Patl_3562 956ca6f725b64592a55a57a3a3caa88c 501 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 487 1.8E-122 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Patl_3562 956ca6f725b64592a55a57a3a3caa88c 501 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 348 355 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Patl_3562 956ca6f725b64592a55a57a3a3caa88c 501 SUPERFAMILY SSF52949 2 182 1.06E-48 T 11-10-2018 Patl_3562 956ca6f725b64592a55a57a3a3caa88c 501 SUPERFAMILY SSF53187 184 495 5.65E-122 T 11-10-2018 Patl_3562 956ca6f725b64592a55a57a3a3caa88c 501 Gene3D G3DSA:3.40.630.10 182 496 1.7E-135 T 11-10-2018 Patl_3562 956ca6f725b64592a55a57a3a3caa88c 501 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 2.0E-32 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Patl_3562 956ca6f725b64592a55a57a3a3caa88c 501 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 496 39.406 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 Patl_2701 4ca194fbe88c9cae8c8d76414fbbc8c2 822 Pfam PF00593 TonB dependent receptor 340 793 2.9E-36 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_2701 4ca194fbe88c9cae8c8d76414fbbc8c2 822 SUPERFAMILY SSF56935 34 822 1.36E-97 T 11-10-2018 Patl_2701 4ca194fbe88c9cae8c8d76414fbbc8c2 822 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 160 3.5E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_2701 4ca194fbe88c9cae8c8d76414fbbc8c2 822 Gene3D G3DSA:2.40.170.20 43 316 3.6E-45 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_1962 bcf9a1527e765441b9884137b1d6534f 375 Gene3D G3DSA:2.120.10.30 141 374 6.7E-21 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Patl_1962 bcf9a1527e765441b9884137b1d6534f 375 SUPERFAMILY SSF63829 45 365 1.28E-18 T 11-10-2018 Patl_4239 4a5d83e0ad1a994bbf862cbd7900cd5f 325 Pfam PF02628 Cytochrome oxidase assembly protein 3 315 3.2E-89 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 Patl_0885 7c4d1d78d941926627ced72554ae9ce4 808 Gene3D G3DSA:3.40.50.880 597 785 4.5E-13 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_0885 7c4d1d78d941926627ced72554ae9ce4 808 Gene3D G3DSA:3.20.20.80 217 585 2.7E-40 T 11-10-2018 Patl_0885 7c4d1d78d941926627ced72554ae9ce4 808 SUPERFAMILY SSF51445 246 422 3.86E-5 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_1773 a44617b1340f51234753280d3ad7441f 244 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 3 220 2.4E-38 T 11-10-2018 Patl_1773 a44617b1340f51234753280d3ad7441f 244 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 1 238 26.941 T 11-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 Patl_2968 a251a5e7c7dd1d9195572e0070faab12 357 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 349 26.512 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Patl_2968 a251a5e7c7dd1d9195572e0070faab12 357 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 3.9E-129 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 Patl_2968 a251a5e7c7dd1d9195572e0070faab12 357 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 6.6E-101 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 Patl_1042 51336255fcd8303cdb8684fca067fb18 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 1.4E-127 T 11-10-2018 IPR017861 Kae1/TsaD family Patl_1042 51336255fcd8303cdb8684fca067fb18 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 65.015 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Patl_1042 51336255fcd8303cdb8684fca067fb18 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.0E-51 T 11-10-2018 IPR017861 Kae1/TsaD family Patl_1042 51336255fcd8303cdb8684fca067fb18 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.0E-51 T 11-10-2018 IPR017861 Kae1/TsaD family Patl_1042 51336255fcd8303cdb8684fca067fb18 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.0E-51 T 11-10-2018 IPR017861 Kae1/TsaD family Patl_1042 51336255fcd8303cdb8684fca067fb18 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.0E-51 T 11-10-2018 IPR017861 Kae1/TsaD family Patl_1042 51336255fcd8303cdb8684fca067fb18 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.0E-51 T 11-10-2018 IPR017861 Kae1/TsaD family Patl_1042 51336255fcd8303cdb8684fca067fb18 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.0E-51 T 11-10-2018 IPR017861 Kae1/TsaD family Patl_1042 51336255fcd8303cdb8684fca067fb18 337 SUPERFAMILY SSF53067 101 309 9.91E-44 T 11-10-2018 Patl_1042 51336255fcd8303cdb8684fca067fb18 337 Gene3D G3DSA:3.30.420.40 129 293 1.0E-130 T 11-10-2018 Patl_1042 51336255fcd8303cdb8684fca067fb18 337 Gene3D G3DSA:3.30.420.40 3 315 1.0E-130 T 11-10-2018 Patl_1042 51336255fcd8303cdb8684fca067fb18 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 Patl_1042 51336255fcd8303cdb8684fca067fb18 337 Pfam PF00814 Glycoprotease family 24 307 6.3E-104 T 11-10-2018 IPR000905 Gcp-like domain Patl_1042 51336255fcd8303cdb8684fca067fb18 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.7E-135 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Patl_1042 51336255fcd8303cdb8684fca067fb18 337 SUPERFAMILY SSF53067 3 121 3.84E-31 T 11-10-2018 Patl_0420 afb9fd07a64fe578c9fbf62c5fe08eb5 142 ProSitePatterns PS00194 Thioredoxin family active site. 57 75 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Patl_0420 afb9fd07a64fe578c9fbf62c5fe08eb5 142 Gene3D G3DSA:3.40.30.10 33 142 4.6E-30 T 11-10-2018 Patl_0420 afb9fd07a64fe578c9fbf62c5fe08eb5 142 Gene3D G3DSA:2.20.28.140 1 32 1.3E-9 T 11-10-2018 Patl_0420 afb9fd07a64fe578c9fbf62c5fe08eb5 142 PIRSF PIRSF000077 34 139 3.0E-32 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Patl_0420 afb9fd07a64fe578c9fbf62c5fe08eb5 142 PRINTS PR00421 Thioredoxin family signature 56 64 1.6E-8 T 11-10-2018 Patl_0420 afb9fd07a64fe578c9fbf62c5fe08eb5 142 PRINTS PR00421 Thioredoxin family signature 103 114 1.6E-8 T 11-10-2018 Patl_0420 afb9fd07a64fe578c9fbf62c5fe08eb5 142 PRINTS PR00421 Thioredoxin family signature 64 73 1.6E-8 T 11-10-2018 Patl_0420 afb9fd07a64fe578c9fbf62c5fe08eb5 142 TIGRFAM TIGR01068 thioredoxin: thioredoxin 41 137 1.3E-32 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Patl_0420 afb9fd07a64fe578c9fbf62c5fe08eb5 142 SUPERFAMILY SSF52833 30 140 5.51E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_0420 afb9fd07a64fe578c9fbf62c5fe08eb5 142 Pfam PF00085 Thioredoxin 39 136 2.9E-28 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 Patl_3276 a45a4d9e4924cb536568942eb69b1da9 520 PIRSF PIRSF011396 1 517 9.3E-159 T 11-10-2018 IPR033856 Flavin-dependent tryptophan halogenase Patl_3276 a45a4d9e4924cb536568942eb69b1da9 520 Pfam PF04820 Tryptophan halogenase 8 467 1.0E-112 T 11-10-2018 IPR006905 Flavin-dependent halogenase Patl_3276 a45a4d9e4924cb536568942eb69b1da9 520 Gene3D G3DSA:3.50.50.60 1 516 4.7E-177 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3276 a45a4d9e4924cb536568942eb69b1da9 520 SUPERFAMILY SSF51905 7 434 2.75E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2484 f6ac259bf6ba71c7a7d7e6d3e1ff4f54 123 Gene3D G3DSA:3.40.30.10 1 123 4.3E-40 T 11-10-2018 Patl_2484 f6ac259bf6ba71c7a7d7e6d3e1ff4f54 123 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 123 6.4E-36 T 11-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 Patl_2484 f6ac259bf6ba71c7a7d7e6d3e1ff4f54 123 SUPERFAMILY SSF52833 4 123 1.11E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_2484 f6ac259bf6ba71c7a7d7e6d3e1ff4f54 123 Pfam PF03960 ArsC family 10 121 1.1E-13 T 11-10-2018 IPR006660 Arsenate reductase-like Patl_4021 aadeca453cd857ab853ebf2096e15a53 413 Gene3D G3DSA:3.90.1150.10 277 412 4.4E-40 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_4021 aadeca453cd857ab853ebf2096e15a53 413 SUPERFAMILY SSF53383 5 409 6.38E-86 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_4021 aadeca453cd857ab853ebf2096e15a53 413 Gene3D G3DSA:3.40.640.10 5 276 1.1E-64 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_4021 aadeca453cd857ab853ebf2096e15a53 413 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 409 1.4E-99 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Patl_4021 aadeca453cd857ab853ebf2096e15a53 413 PIRSF PIRSF001434 1 413 1.7E-111 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Patl_2867 8de65b8fb63c066fc5751a4c4de6d47d 232 SUPERFAMILY SSF161111 12 194 1.57E-38 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Patl_2867 8de65b8fb63c066fc5751a4c4de6d47d 232 Pfam PF01545 Cation efflux family 19 192 6.2E-20 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Patl_2867 8de65b8fb63c066fc5751a4c4de6d47d 232 Gene3D G3DSA:1.20.1510.10 14 195 2.1E-15 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Patl_2867 8de65b8fb63c066fc5751a4c4de6d47d 232 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 207 3.7E-24 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Patl_3073 5d3333bb0ef4eed8745cc69d362f7815 86 SUPERFAMILY SSF47336 4 64 2.75E-6 T 11-10-2018 IPR036736 ACP-like superfamily Patl_3073 5d3333bb0ef4eed8745cc69d362f7815 86 Gene3D G3DSA:1.10.1200.10 2 78 2.7E-7 T 11-10-2018 IPR036736 ACP-like superfamily Patl_3073 5d3333bb0ef4eed8745cc69d362f7815 86 Pfam PF00550 Phosphopantetheine attachment site 13 57 2.5E-5 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain Patl_2348 ff12eba0ee7b00f858b6c2c91ac44702 769 Pfam PF00929 Exonuclease 605 759 1.7E-32 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Patl_2348 ff12eba0ee7b00f858b6c2c91ac44702 769 SMART SM00479 603 768 7.4E-45 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Patl_2348 ff12eba0ee7b00f858b6c2c91ac44702 769 Gene3D G3DSA:3.40.1350.10 524 596 7.8E-9 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Patl_2348 ff12eba0ee7b00f858b6c2c91ac44702 769 Pfam PF08774 VRR-NUC domain 526 596 2.0E-13 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 Patl_2348 ff12eba0ee7b00f858b6c2c91ac44702 769 Gene3D G3DSA:3.30.420.10 598 768 1.5E-47 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Patl_2348 ff12eba0ee7b00f858b6c2c91ac44702 769 SUPERFAMILY SSF53098 599 763 4.02E-53 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_2348 ff12eba0ee7b00f858b6c2c91ac44702 769 SMART SM00990 487 596 3.3E-26 T 11-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 Patl_2348 ff12eba0ee7b00f858b6c2c91ac44702 769 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 603 762 9.6E-33 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_2046 ca993ed5ad169045f3463b3faa0d2f52 491 Pfam PF00005 ABC transporter 278 430 2.2E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_2046 ca993ed5ad169045f3463b3faa0d2f52 491 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_2046 ca993ed5ad169045f3463b3faa0d2f52 491 Gene3D G3DSA:3.40.50.300 251 481 1.4E-38 T 11-10-2018 Patl_2046 ca993ed5ad169045f3463b3faa0d2f52 491 Gene3D G3DSA:3.40.50.300 1 235 9.6E-34 T 11-10-2018 Patl_2046 ca993ed5ad169045f3463b3faa0d2f52 491 Pfam PF00005 ABC transporter 18 166 1.3E-16 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_2046 ca993ed5ad169045f3463b3faa0d2f52 491 SUPERFAMILY SSF52540 254 475 1.13E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2046 ca993ed5ad169045f3463b3faa0d2f52 491 SUPERFAMILY SSF52540 3 223 1.5E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2046 ca993ed5ad169045f3463b3faa0d2f52 491 SMART SM00382 286 479 8.1E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2046 ca993ed5ad169045f3463b3faa0d2f52 491 SMART SM00382 27 221 7.0E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_4211 e56b7c500d46593a6e6ea5b6bb870f2a 544 SUPERFAMILY SSF56112 91 434 3.12E-44 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Patl_4211 e56b7c500d46593a6e6ea5b6bb870f2a 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 443 1.6E-173 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 Patl_4211 e56b7c500d46593a6e6ea5b6bb870f2a 544 Pfam PF03109 ABC1 family 114 229 2.5E-34 T 11-10-2018 IPR004147 UbiB domain Patl_4211 e56b7c500d46593a6e6ea5b6bb870f2a 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 538 51.83 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 Patl_1483 f5f1c14b5ecddc2599a05f408a018cf1 215 PIRSF PIRSF006324 1 210 3.0E-54 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Patl_1483 f5f1c14b5ecddc2599a05f408a018cf1 215 Pfam PF01810 LysE type translocator 16 207 2.4E-35 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Patl_4135 91ec3607fae9d569eb960b2beac6fe54 451 Pfam PF10011 Predicted membrane protein (DUF2254) 17 396 3.5E-121 T 11-10-2018 IPR018723 Protein of unknown function DUF2254, membrane Patl_0024 a05ba2153fc6bb734c39da02c5ce11fb 359 SUPERFAMILY SSF54106 32 81 4.05E-7 T 11-10-2018 Patl_0024 a05ba2153fc6bb734c39da02c5ce11fb 359 Pfam PF01476 LysM domain 34 80 2.0E-11 T 11-10-2018 IPR018392 LysM domain Patl_0024 a05ba2153fc6bb734c39da02c5ce11fb 359 Gene3D G3DSA:3.10.350.10 32 79 9.1E-12 T 11-10-2018 IPR036779 LysM domain superfamily Patl_0024 a05ba2153fc6bb734c39da02c5ce11fb 359 SMART SM00257 33 81 4.7E-4 T 11-10-2018 IPR018392 LysM domain Patl_3571 b0efadbace33701b57230a48c7b64c89 232 SMART SM00448 2 112 9.8E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3571 b0efadbace33701b57230a48c7b64c89 232 Gene3D G3DSA:3.40.50.2300 1 120 9.4E-33 T 11-10-2018 Patl_3571 b0efadbace33701b57230a48c7b64c89 232 Pfam PF00072 Response regulator receiver domain 4 113 5.4E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3571 b0efadbace33701b57230a48c7b64c89 232 SMART SM00862 150 226 1.9E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_3571 b0efadbace33701b57230a48c7b64c89 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 2.3E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_3571 b0efadbace33701b57230a48c7b64c89 232 Gene3D G3DSA:1.10.10.10 121 232 4.6E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3571 b0efadbace33701b57230a48c7b64c89 232 SUPERFAMILY SSF52172 1 186 3.62E-37 T 11-10-2018 IPR011006 CheY-like superfamily Patl_0825 3e87722ee07348769c2a450eb66ed33d 733 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 371 602 6.3E-52 T 11-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 Patl_0825 3e87722ee07348769c2a450eb66ed33d 733 PRINTS PR00133 Glycosyl hydrolase family 3 signature 87 106 9.1E-10 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Patl_0825 3e87722ee07348769c2a450eb66ed33d 733 PRINTS PR00133 Glycosyl hydrolase family 3 signature 253 271 9.1E-10 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Patl_0825 3e87722ee07348769c2a450eb66ed33d 733 PRINTS PR00133 Glycosyl hydrolase family 3 signature 182 198 9.1E-10 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Patl_0825 3e87722ee07348769c2a450eb66ed33d 733 SMART SM01217 644 713 9.7E-24 T 11-10-2018 IPR026891 Fibronectin type III-like domain Patl_0825 3e87722ee07348769c2a450eb66ed33d 733 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 58 329 1.1E-48 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Patl_0825 3e87722ee07348769c2a450eb66ed33d 733 Gene3D G3DSA:2.60.40.10 614 725 9.1E-27 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0825 3e87722ee07348769c2a450eb66ed33d 733 Gene3D G3DSA:3.40.50.1700 356 603 5.9E-67 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Patl_0825 3e87722ee07348769c2a450eb66ed33d 733 SUPERFAMILY SSF51445 24 370 6.53E-95 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_0825 3e87722ee07348769c2a450eb66ed33d 733 Gene3D G3DSA:3.20.20.300 32 351 2.4E-98 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Patl_0825 3e87722ee07348769c2a450eb66ed33d 733 SUPERFAMILY SSF52279 371 604 4.32E-50 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 Patl_0825 3e87722ee07348769c2a450eb66ed33d 733 Pfam PF14310 Fibronectin type III-like domain 644 713 8.9E-19 T 11-10-2018 IPR026891 Fibronectin type III-like domain Patl_2871 bfe1d53580af48368488636d17800414 357 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 351 3.3E-68 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Patl_2871 bfe1d53580af48368488636d17800414 357 SUPERFAMILY SSF111369 56 274 2.35E-30 T 11-10-2018 Patl_2871 bfe1d53580af48368488636d17800414 357 Gene3D G3DSA:2.40.420.20 278 348 1.2E-67 T 11-10-2018 Patl_2871 bfe1d53580af48368488636d17800414 357 Gene3D G3DSA:2.40.50.100 65 197 1.2E-67 T 11-10-2018 Patl_2871 bfe1d53580af48368488636d17800414 357 Gene3D G3DSA:2.40.30.170 54 277 1.2E-67 T 11-10-2018 Patl_2871 bfe1d53580af48368488636d17800414 357 Gene3D G3DSA:1.10.287.470 99 158 1.2E-67 T 11-10-2018 Patl_2871 bfe1d53580af48368488636d17800414 357 Pfam PF13437 HlyD family secretion protein 163 267 2.7E-10 T 11-10-2018 Patl_2871 bfe1d53580af48368488636d17800414 357 Pfam PF13533 Biotin-lipoyl like 70 111 6.5E-8 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Patl_4155 3fdbecbefdc2dadbee47b46062d81c23 77 SUPERFAMILY SSF47384 13 75 3.34E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_4155 3fdbecbefdc2dadbee47b46062d81c23 77 Gene3D G3DSA:1.10.287.130 12 74 2.0E-5 T 11-10-2018 Patl_4055 b5339a6a74b5e9dcafbe782d4b5d8554 300 Pfam PF01553 Acyltransferase 72 228 1.1E-16 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Patl_4055 b5339a6a74b5e9dcafbe782d4b5d8554 300 SUPERFAMILY SSF69593 15 234 9.81E-32 T 11-10-2018 Patl_4055 b5339a6a74b5e9dcafbe782d4b5d8554 300 SMART SM00563 87 229 2.5E-18 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Patl_1468 b2d99d7c56d28ba864b093bca1471fff 257 Gene3D G3DSA:3.60.10.10 26 252 1.0E-16 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Patl_1468 b2d99d7c56d28ba864b093bca1471fff 257 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 32 241 9.2E-6 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Patl_1468 b2d99d7c56d28ba864b093bca1471fff 257 SUPERFAMILY SSF56219 29 248 8.24E-22 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Patl_0865 835a512975355972cf8eda86a25106d3 829 Gene3D G3DSA:2.40.170.20 532 829 2.0E-45 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_0865 835a512975355972cf8eda86a25106d3 829 Gene3D G3DSA:2.40.170.20 46 478 3.2E-70 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_0865 835a512975355972cf8eda86a25106d3 829 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 162 2.1E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0865 835a512975355972cf8eda86a25106d3 829 Pfam PF00593 TonB dependent receptor 288 825 2.6E-29 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0865 835a512975355972cf8eda86a25106d3 829 SUPERFAMILY SSF56935 32 828 7.33E-102 T 11-10-2018 Patl_0277 48aa180e45c8c43407d8d1e58caad35d 195 Pfam PF13599 Pentapeptide repeats (9 copies) 119 179 4.8E-10 T 11-10-2018 IPR001646 Pentapeptide repeat Patl_0277 48aa180e45c8c43407d8d1e58caad35d 195 Pfam PF13599 Pentapeptide repeats (9 copies) 26 105 4.4E-7 T 11-10-2018 IPR001646 Pentapeptide repeat Patl_0277 48aa180e45c8c43407d8d1e58caad35d 195 Gene3D G3DSA:2.160.20.80 13 195 4.6E-47 T 11-10-2018 Patl_0277 48aa180e45c8c43407d8d1e58caad35d 195 SUPERFAMILY SSF141571 18 193 1.44E-35 T 11-10-2018 Patl_3884 af2773f6756d7c663a049e339b525d5e 312 SUPERFAMILY SSF55347 124 258 6.54E-11 T 11-10-2018 Patl_3884 af2773f6756d7c663a049e339b525d5e 312 Gene3D G3DSA:3.30.360.10 120 303 3.5E-52 T 11-10-2018 Patl_3884 af2773f6756d7c663a049e339b525d5e 312 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 1.7E-23 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 Patl_3884 af2773f6756d7c663a049e339b525d5e 312 SUPERFAMILY SSF51735 2 139 7.38E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3884 af2773f6756d7c663a049e339b525d5e 312 Gene3D G3DSA:3.40.50.720 2 292 3.5E-52 T 11-10-2018 Patl_1789 48dcf11bf48d915f8341886245b9ea60 313 SUPERFAMILY SSF53850 93 292 1.63E-23 T 11-10-2018 Patl_1789 48dcf11bf48d915f8341886245b9ea60 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.1E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1789 48dcf11bf48d915f8341886245b9ea60 313 Gene3D G3DSA:1.10.10.10 2 89 2.7E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1789 48dcf11bf48d915f8341886245b9ea60 313 Pfam PF03466 LysR substrate binding domain 94 289 1.7E-21 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_1789 48dcf11bf48d915f8341886245b9ea60 313 Gene3D G3DSA:3.40.190.290 97 274 4.8E-20 T 11-10-2018 Patl_1789 48dcf11bf48d915f8341886245b9ea60 313 SUPERFAMILY SSF46785 7 92 1.73E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2922 806a4b7917c7589255ecfe1e5379c2fe 307 SUPERFAMILY SSF53474 56 302 1.58E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2922 806a4b7917c7589255ecfe1e5379c2fe 307 Pfam PF07859 alpha/beta hydrolase fold 95 190 9.8E-10 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 Patl_2922 806a4b7917c7589255ecfe1e5379c2fe 307 Gene3D G3DSA:3.40.50.1820 48 301 7.5E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2629 c4db2ca809cb582344f6f4de5b1ea3e4 74 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 5 65 2.5E-16 T 11-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system Patl_3910 cb570586aafb454da42c470c193e923f 200 Pfam PF11845 Protein of unknown function (DUF3365) 22 196 9.4E-30 T 11-10-2018 IPR021796 Protein of unknown function DUF3365 Patl_3072 f562cb06dbdadef1bca7d93ae77a134b 448 Gene3D G3DSA:3.30.300.30 352 445 1.2E-12 T 11-10-2018 Patl_3072 f562cb06dbdadef1bca7d93ae77a134b 448 Pfam PF00501 AMP-binding enzyme 85 281 1.9E-12 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Patl_3072 f562cb06dbdadef1bca7d93ae77a134b 448 SUPERFAMILY SSF56801 71 443 2.62E-43 T 11-10-2018 Patl_3072 f562cb06dbdadef1bca7d93ae77a134b 448 Pfam PF13193 AMP-binding enzyme C-terminal domain 363 440 9.0E-6 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Patl_3072 f562cb06dbdadef1bca7d93ae77a134b 448 Gene3D G3DSA:3.40.50.12780 16 351 9.8E-21 T 11-10-2018 Patl_3494 692d86582b2a8ff4a2c33e5c971bb740 300 SUPERFAMILY SSF53300 77 228 7.63E-9 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Patl_3494 692d86582b2a8ff4a2c33e5c971bb740 300 Pfam PF01882 Protein of unknown function DUF58 40 131 1.7E-19 T 11-10-2018 IPR002881 Domain of unknown function DUF58 Patl_1568 d23d6b2ea7b5261e66e5c581574b0f56 164 Gene3D G3DSA:2.40.10.330 71 124 1.6E-51 T 11-10-2018 Patl_1568 d23d6b2ea7b5261e66e5c581574b0f56 164 SUPERFAMILY SSF54534 2 143 5.7E-30 T 11-10-2018 Patl_1568 d23d6b2ea7b5261e66e5c581574b0f56 164 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 105 2.9E-9 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Patl_1568 d23d6b2ea7b5261e66e5c581574b0f56 164 Gene3D G3DSA:3.10.50.40 3 157 1.6E-51 T 11-10-2018 Patl_3519 3c6ba360feb78087dcd9732a27ac3dcf 382 Gene3D G3DSA:3.40.50.2000 185 362 1.1E-110 T 11-10-2018 Patl_3519 3c6ba360feb78087dcd9732a27ac3dcf 382 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 15 378 35.894 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_3519 3c6ba360feb78087dcd9732a27ac3dcf 382 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 206 368 2.8E-38 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Patl_3519 3c6ba360feb78087dcd9732a27ac3dcf 382 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 16 152 2.5E-42 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_3519 3c6ba360feb78087dcd9732a27ac3dcf 382 Gene3D G3DSA:3.40.50.2000 16 368 1.1E-110 T 11-10-2018 Patl_3519 3c6ba360feb78087dcd9732a27ac3dcf 382 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 13 371 1.5E-101 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_3519 3c6ba360feb78087dcd9732a27ac3dcf 382 SUPERFAMILY SSF53756 14 376 1.16E-112 T 11-10-2018 Patl_0769 33b820bf919ae4bcceb6b7d3d7bb8f1d 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 9.4E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0769 33b820bf919ae4bcceb6b7d3d7bb8f1d 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 9.4E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0769 33b820bf919ae4bcceb6b7d3d7bb8f1d 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 9.4E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0769 33b820bf919ae4bcceb6b7d3d7bb8f1d 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 9.4E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0769 33b820bf919ae4bcceb6b7d3d7bb8f1d 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 9.4E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0769 33b820bf919ae4bcceb6b7d3d7bb8f1d 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 9.4E-38 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0769 33b820bf919ae4bcceb6b7d3d7bb8f1d 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 5.2E-58 T 11-10-2018 Patl_0769 33b820bf919ae4bcceb6b7d3d7bb8f1d 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.9E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0769 33b820bf919ae4bcceb6b7d3d7bb8f1d 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.9E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0769 33b820bf919ae4bcceb6b7d3d7bb8f1d 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.9E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0769 33b820bf919ae4bcceb6b7d3d7bb8f1d 244 SUPERFAMILY SSF51735 5 243 2.17E-75 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0769 33b820bf919ae4bcceb6b7d3d7bb8f1d 244 Gene3D G3DSA:3.40.50.720 4 243 2.8E-74 T 11-10-2018 Patl_1092 5893cf41899f73b25676147bd6e8912e 315 SUPERFAMILY SSF53448 14 228 1.95E-43 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_1092 5893cf41899f73b25676147bd6e8912e 315 Gene3D G3DSA:3.90.550.10 2 250 3.0E-47 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_1092 5893cf41899f73b25676147bd6e8912e 315 Pfam PF00535 Glycosyl transferase family 2 16 143 1.8E-26 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Patl_4099 3e8610361f28aae282d0e020e06ea5d9 606 Pfam PF13538 UvrD-like helicase C-terminal domain 536 579 7.7E-10 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain Patl_4099 3e8610361f28aae282d0e020e06ea5d9 606 Gene3D G3DSA:3.40.50.300 221 436 8.4E-15 T 11-10-2018 Patl_4099 3e8610361f28aae282d0e020e06ea5d9 606 Pfam PF08378 Nuclease-related domain 20 117 1.9E-16 T 11-10-2018 IPR011528 Nuclease-related domain, NERD Patl_4099 3e8610361f28aae282d0e020e06ea5d9 606 Gene3D G3DSA:3.40.50.300 448 603 6.2E-8 T 11-10-2018 Patl_4099 3e8610361f28aae282d0e020e06ea5d9 606 Pfam PF04851 Type III restriction enzyme, res subunit 233 304 1.2E-5 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Patl_4099 3e8610361f28aae282d0e020e06ea5d9 606 SUPERFAMILY SSF52540 226 578 1.74E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0207 56892680f8de20274bfd0b0927d3d73a 296 SUPERFAMILY SSF53474 76 295 2.82E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0207 56892680f8de20274bfd0b0927d3d73a 296 Gene3D G3DSA:3.40.50.1820 58 295 5.6E-63 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0207 56892680f8de20274bfd0b0927d3d73a 296 Pfam PF01738 Dienelactone hydrolase family 86 294 4.9E-50 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Patl_1314 e27837f74db445a696882172339698d9 158 Gene3D G3DSA:3.40.50.960 1 156 2.8E-62 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Patl_1314 e27837f74db445a696882172339698d9 158 SUPERFAMILY SSF52121 3 154 3.01E-59 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Patl_1314 e27837f74db445a696882172339698d9 158 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 3.0E-56 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Patl_1314 e27837f74db445a696882172339698d9 158 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 151 2.1E-53 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Patl_1314 e27837f74db445a696882172339698d9 158 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.155 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Patl_3599 dcd792e9dac638d779520013e923799e 452 SUPERFAMILY SSF56954 4 449 6.93E-72 T 11-10-2018 Patl_3599 dcd792e9dac638d779520013e923799e 452 Gene3D G3DSA:2.20.200.10 101 338 2.1E-83 T 11-10-2018 Patl_3599 dcd792e9dac638d779520013e923799e 452 Pfam PF02321 Outer membrane efflux protein 67 242 8.6E-15 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Patl_3599 dcd792e9dac638d779520013e923799e 452 Pfam PF02321 Outer membrane efflux protein 270 447 2.7E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Patl_3599 dcd792e9dac638d779520013e923799e 452 Gene3D G3DSA:1.20.1600.10 63 448 2.1E-83 T 11-10-2018 Patl_4181 de3b39777ff3769b76756cba04460a30 498 Gene3D G3DSA:1.10.287.950 174 498 1.2E-52 T 11-10-2018 Patl_4181 de3b39777ff3769b76756cba04460a30 498 SMART SM00283 225 497 3.0E-38 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_4181 de3b39777ff3769b76756cba04460a30 498 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 297 464 6.3E-38 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_4181 de3b39777ff3769b76756cba04460a30 498 SUPERFAMILY SSF58104 209 497 4.32E-54 T 11-10-2018 Patl_4208 5cd56a72168a620b7b96c5af7245097a 235 SUPERFAMILY SSF48150 44 189 2.04E-36 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Patl_4208 5cd56a72168a620b7b96c5af7245097a 235 Gene3D G3DSA:1.10.340.30 42 161 1.2E-17 T 11-10-2018 Patl_4208 5cd56a72168a620b7b96c5af7245097a 235 Pfam PF03352 Methyladenine glycosylase 55 138 2.1E-14 T 11-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 Patl_3816 2a256cde7a19112d44c05bdd19116181 148 Pfam PF11215 Protein of unknown function (DUF3010) 1 137 2.8E-58 T 11-10-2018 IPR021378 Protein of unknown function DUF3010 Patl_1462 08caf94d5bc37f6e592693af19affcb1 253 Gene3D G3DSA:1.10.12.10 198 253 6.6E-13 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Patl_1462 08caf94d5bc37f6e592693af19affcb1 253 Gene3D G3DSA:3.90.226.10 2 196 9.7E-58 T 11-10-2018 Patl_1462 08caf94d5bc37f6e592693af19affcb1 253 SUPERFAMILY SSF52096 2 252 2.83E-73 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_1462 08caf94d5bc37f6e592693af19affcb1 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 252 1.1E-51 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Patl_1714 633c3dca26061d2a0723c5b441a69a09 557 PIRSF PIRSF003128 1 557 8.0E-154 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Patl_1714 633c3dca26061d2a0723c5b441a69a09 557 SUPERFAMILY SSF52540 2 503 1.2E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1714 633c3dca26061d2a0723c5b441a69a09 557 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 512 4.5E-18 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Patl_1714 633c3dca26061d2a0723c5b441a69a09 557 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 553 1.2E-166 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Patl_1714 633c3dca26061d2a0723c5b441a69a09 557 Gene3D G3DSA:3.40.50.300 267 554 2.5E-48 T 11-10-2018 Patl_1714 633c3dca26061d2a0723c5b441a69a09 557 Gene3D G3DSA:3.40.50.300 1 260 5.2E-44 T 11-10-2018 Patl_1714 633c3dca26061d2a0723c5b441a69a09 557 SUPERFAMILY SSF52540 1 217 2.41E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2019 e21e4994ebce7cdab9c9ddb37278bf67 277 Gene3D G3DSA:1.10.3210.10 102 271 1.5E-40 T 11-10-2018 Patl_2019 e21e4994ebce7cdab9c9ddb37278bf67 277 SMART SM00471 127 235 6.5E-5 T 11-10-2018 IPR003607 HD/PDEase domain Patl_2019 e21e4994ebce7cdab9c9ddb37278bf67 277 SUPERFAMILY SSF109604 98 240 6.03E-25 T 11-10-2018 Patl_2019 e21e4994ebce7cdab9c9ddb37278bf67 277 Pfam PF13328 HD domain 111 190 9.8E-15 T 11-10-2018 IPR003607 HD/PDEase domain Patl_1819 94573dcb69ecc86120c64072998002dd 100 Pfam PF03692 Putative zinc- or iron-chelating domain 22 90 2.0E-10 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Patl_2497 9e151b528766b6d1e86534b57b1ec47c 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 2.2E-24 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Patl_2497 9e151b528766b6d1e86534b57b1ec47c 65 SUPERFAMILY SSF143034 2 64 3.27E-22 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2497 9e151b528766b6d1e86534b57b1ec47c 65 Gene3D G3DSA:2.40.50.530 1 64 6.0E-21 T 11-10-2018 Patl_2497 9e151b528766b6d1e86534b57b1ec47c 65 Pfam PF01632 Ribosomal protein L35 2 62 2.0E-22 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2497 9e151b528766b6d1e86534b57b1ec47c 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_2497 9e151b528766b6d1e86534b57b1ec47c 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.214 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Patl_2497 9e151b528766b6d1e86534b57b1ec47c 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.7E-19 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Patl_2497 9e151b528766b6d1e86534b57b1ec47c 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.7E-19 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Patl_2497 9e151b528766b6d1e86534b57b1ec47c 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.7E-19 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Patl_2865 2c86da2da29c8128ee59de1c9811524f 798 SUPERFAMILY SSF56935 33 798 8.99E-108 T 11-10-2018 Patl_2865 2c86da2da29c8128ee59de1c9811524f 798 Pfam PF00593 TonB dependent receptor 317 795 4.6E-39 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_2865 2c86da2da29c8128ee59de1c9811524f 798 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 164 4.5E-16 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3283 907e9c9ed545247d33a59588b11dc823 218 SUPERFAMILY SSF101386 1 217 2.42E-61 T 11-10-2018 Patl_3283 907e9c9ed545247d33a59588b11dc823 218 Gene3D G3DSA:1.10.4010.10 1 218 2.3E-67 T 11-10-2018 Patl_3283 907e9c9ed545247d33a59588b11dc823 218 Pfam PF08761 dUTPase 6 171 1.2E-29 T 11-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 Patl_0356 905ed847f6b8cd8123100356c72ef277 159 Pfam PF08534 Redoxin 4 154 4.2E-36 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Patl_0356 905ed847f6b8cd8123100356c72ef277 159 Gene3D G3DSA:3.40.30.10 2 159 7.7E-59 T 11-10-2018 Patl_0356 905ed847f6b8cd8123100356c72ef277 159 SUPERFAMILY SSF52833 1 156 3.71E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_0422 c590e1b0dbdb1127687f8057a22d683e 213 SUPERFAMILY SSF48613 11 211 1.89E-32 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Patl_0422 c590e1b0dbdb1127687f8057a22d683e 213 Gene3D G3DSA:1.20.910.10 1 210 1.9E-40 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 Patl_0422 c590e1b0dbdb1127687f8057a22d683e 213 Pfam PF01126 Heme oxygenase 14 207 1.5E-10 T 11-10-2018 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|MetaCyc: PWY-5874|Reactome: R-HSA-189483|Reactome: R-HSA-917937 Patl_0215 308de3b34084e6cd2638fdc39fadd0c5 432 SUPERFAMILY SSF52540 3 430 9.14E-179 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0215 308de3b34084e6cd2638fdc39fadd0c5 432 Gene3D G3DSA:3.40.440.10 6 249 4.5E-104 T 11-10-2018 Patl_0215 308de3b34084e6cd2638fdc39fadd0c5 432 Gene3D G3DSA:1.10.300.10 102 201 4.5E-104 T 11-10-2018 Patl_0215 308de3b34084e6cd2638fdc39fadd0c5 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Patl_0215 308de3b34084e6cd2638fdc39fadd0c5 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 6.4E-191 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Patl_0215 308de3b34084e6cd2638fdc39fadd0c5 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 216.862 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Patl_0215 308de3b34084e6cd2638fdc39fadd0c5 432 SMART SM00788 4 425 2.1E-296 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Patl_0215 308de3b34084e6cd2638fdc39fadd0c5 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Patl_0215 308de3b34084e6cd2638fdc39fadd0c5 432 Gene3D G3DSA:3.90.170.10 267 432 2.3E-68 T 11-10-2018 Patl_0215 308de3b34084e6cd2638fdc39fadd0c5 432 Pfam PF00709 Adenylosuccinate synthetase 5 424 5.2E-177 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Patl_0226 c183764930453764c98e53626faef6bf 432 Pfam PF00672 HAMP domain 169 216 9.2E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_0226 c183764930453764c98e53626faef6bf 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 4.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0226 c183764930453764c98e53626faef6bf 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 4.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0226 c183764930453764c98e53626faef6bf 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 4.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0226 c183764930453764c98e53626faef6bf 432 SMART SM00388 222 282 2.5E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_0226 c183764930453764c98e53626faef6bf 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 428 3.7E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0226 c183764930453764c98e53626faef6bf 432 SUPERFAMILY SSF47384 206 281 5.49E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_0226 c183764930453764c98e53626faef6bf 432 SMART SM00304 169 221 5.4E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_0226 c183764930453764c98e53626faef6bf 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 281 3.3E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_0226 c183764930453764c98e53626faef6bf 432 SUPERFAMILY SSF55874 280 429 3.54E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0226 c183764930453764c98e53626faef6bf 432 Gene3D G3DSA:3.30.565.10 284 431 2.5E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0226 c183764930453764c98e53626faef6bf 432 Gene3D G3DSA:1.10.287.130 166 277 1.2E-23 T 11-10-2018 Patl_0226 c183764930453764c98e53626faef6bf 432 SMART SM00387 321 431 1.7E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_2156 05078f24cfdef89c7f557999a7bc3cbc 81 Gene3D G3DSA:3.10.20.30 1 81 2.1E-22 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_2156 05078f24cfdef89c7f557999a7bc3cbc 81 SUPERFAMILY SSF54285 1 81 1.27E-19 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Patl_2156 05078f24cfdef89c7f557999a7bc3cbc 81 Pfam PF02597 ThiS family 4 81 8.3E-14 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Patl_3681 6ffd7a6ff7c17943bafe623a586f7d08 258 Pfam PF07277 SapC 8 224 2.1E-68 T 11-10-2018 IPR010836 SapC Patl_3595 c973fcdf5a5426ed2a6014f42a3a1b77 216 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 18 215 2.1E-62 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 Patl_3595 c973fcdf5a5426ed2a6014f42a3a1b77 216 Pfam PF03006 Haemolysin-III related 14 208 1.4E-39 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 Patl_1267 51caa1769901944a4b2bb289edc4b2b7 261 Pfam PF01764 Lipase (class 3) 60 202 3.1E-24 T 11-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 Patl_1267 51caa1769901944a4b2bb289edc4b2b7 261 SUPERFAMILY SSF53474 9 222 1.9E-31 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1267 51caa1769901944a4b2bb289edc4b2b7 261 Gene3D G3DSA:3.40.50.1820 4 250 1.2E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0859 284590d415d0357ce8b7fbcd45096dfa 376 Gene3D G3DSA:3.50.50.60 6 370 6.8E-71 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0859 284590d415d0357ce8b7fbcd45096dfa 376 SUPERFAMILY SSF51905 7 351 1.07E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0859 284590d415d0357ce8b7fbcd45096dfa 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 8.1E-17 T 11-10-2018 Patl_0859 284590d415d0357ce8b7fbcd45096dfa 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 8.1E-17 T 11-10-2018 Patl_0859 284590d415d0357ce8b7fbcd45096dfa 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 8.1E-17 T 11-10-2018 Patl_0859 284590d415d0357ce8b7fbcd45096dfa 376 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 8.1E-17 T 11-10-2018 Patl_0859 284590d415d0357ce8b7fbcd45096dfa 376 Pfam PF01494 FAD binding domain 7 343 2.4E-25 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 Patl_1547 75aa85f54ca6a9c7c8144fad7770b858 93 Gene3D G3DSA:2.60.120.10 1 93 1.6E-33 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_1547 75aa85f54ca6a9c7c8144fad7770b858 93 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 93 24.648 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 Patl_1547 75aa85f54ca6a9c7c8144fad7770b858 93 SUPERFAMILY SSF51182 1 92 4.46E-34 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_1547 75aa85f54ca6a9c7c8144fad7770b858 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 4.0E-34 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 Patl_2324 fd551fff6cd64aca61ba716e31c3f1a2 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 2.4E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2324 fd551fff6cd64aca61ba716e31c3f1a2 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 2.4E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2324 fd551fff6cd64aca61ba716e31c3f1a2 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 2.4E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2324 fd551fff6cd64aca61ba716e31c3f1a2 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 2.4E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2324 fd551fff6cd64aca61ba716e31c3f1a2 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 2.4E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2324 fd551fff6cd64aca61ba716e31c3f1a2 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 247 2.4E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2324 fd551fff6cd64aca61ba716e31c3f1a2 266 Gene3D G3DSA:3.40.50.720 2 265 7.1E-74 T 11-10-2018 Patl_2324 fd551fff6cd64aca61ba716e31c3f1a2 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 3.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2324 fd551fff6cd64aca61ba716e31c3f1a2 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 3.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2324 fd551fff6cd64aca61ba716e31c3f1a2 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 3.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_2324 fd551fff6cd64aca61ba716e31c3f1a2 266 SUPERFAMILY SSF51735 12 265 3.34E-70 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2324 fd551fff6cd64aca61ba716e31c3f1a2 266 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 17 198 8.9E-5 T 11-10-2018 Patl_2324 fd551fff6cd64aca61ba716e31c3f1a2 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 264 6.7E-49 T 11-10-2018 Patl_1727 d367a356ffb6656a93b5c2903b8ec05a 403 Pfam PF12704 MacB-like periplasmic core domain 29 239 8.9E-13 T 11-10-2018 IPR025857 MacB-like periplasmic core domain Patl_1727 d367a356ffb6656a93b5c2903b8ec05a 403 Pfam PF02687 FtsX-like permease family 296 396 4.0E-9 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Patl_1727 d367a356ffb6656a93b5c2903b8ec05a 403 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 403 5.2E-125 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 Patl_0980 4ae9a49219c769b09882ca1be16e989d 305 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 148 299 3.6E-45 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Patl_0980 4ae9a49219c769b09882ca1be16e989d 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 128 139 1.4E-18 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Patl_0980 4ae9a49219c769b09882ca1be16e989d 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 289 1.4E-18 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Patl_0980 4ae9a49219c769b09882ca1be16e989d 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 46 65 1.4E-18 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Patl_0980 4ae9a49219c769b09882ca1be16e989d 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 263 1.4E-18 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Patl_0980 4ae9a49219c769b09882ca1be16e989d 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 44 58 2.4E-20 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Patl_0980 4ae9a49219c769b09882ca1be16e989d 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 117 131 2.4E-20 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Patl_0980 4ae9a49219c769b09882ca1be16e989d 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 280 291 2.4E-20 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Patl_0980 4ae9a49219c769b09882ca1be16e989d 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 219 229 2.4E-20 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Patl_0980 4ae9a49219c769b09882ca1be16e989d 305 Gene3D G3DSA:3.40.50.1370 3 130 2.2E-101 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Patl_0980 4ae9a49219c769b09882ca1be16e989d 305 SUPERFAMILY SSF53671 2 303 3.4E-88 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Patl_0980 4ae9a49219c769b09882ca1be16e989d 305 Gene3D G3DSA:3.40.50.1370 131 297 2.2E-101 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Patl_0980 4ae9a49219c769b09882ca1be16e989d 305 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 141 8.1E-43 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Patl_0980 4ae9a49219c769b09882ca1be16e989d 305 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 3 301 8.4E-97 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Patl_3930 b082617e44abbd5ba351540693c40fb4 241 Gene3D G3DSA:3.20.20.450 5 241 1.6E-42 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3930 b082617e44abbd5ba351540693c40fb4 241 SUPERFAMILY SSF141868 10 237 1.18E-42 T 11-10-2018 IPR035919 EAL domain superfamily Patl_3930 b082617e44abbd5ba351540693c40fb4 241 SMART SM00052 2 241 3.5E-11 T 11-10-2018 IPR001633 EAL domain Patl_3930 b082617e44abbd5ba351540693c40fb4 241 Pfam PF00563 EAL domain 9 236 1.5E-42 T 11-10-2018 IPR001633 EAL domain Patl_3600 3f912e4df089c3f2015710824bbeea56 159 SMART SM00465 57 137 4.0E-5 T 11-10-2018 IPR000305 GIY-YIG endonuclease Patl_3600 3f912e4df089c3f2015710824bbeea56 159 Pfam PF01541 GIY-YIG catalytic domain 59 131 4.8E-12 T 11-10-2018 IPR000305 GIY-YIG endonuclease Patl_3600 3f912e4df089c3f2015710824bbeea56 159 Gene3D G3DSA:3.40.1440.10 53 152 3.1E-23 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Patl_3600 3f912e4df089c3f2015710824bbeea56 159 SUPERFAMILY SSF82771 59 131 1.31E-9 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Patl_0989 f2e795cb32d86ea8851f495b1cc79b68 302 Pfam PF12146 Serine aminopeptidase, S33 27 282 5.4E-52 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 Patl_0989 f2e795cb32d86ea8851f495b1cc79b68 302 Gene3D G3DSA:3.40.50.1820 5 299 8.2E-43 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0989 f2e795cb32d86ea8851f495b1cc79b68 302 SUPERFAMILY SSF53474 11 296 2.85E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0033 cdad97d7256a07b0b6e1aa333d0ca5d7 177 Gene3D G3DSA:2.160.10.10 1 177 2.1E-51 T 11-10-2018 Patl_0033 cdad97d7256a07b0b6e1aa333d0ca5d7 177 SUPERFAMILY SSF51161 3 175 3.74E-43 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Patl_0033 cdad97d7256a07b0b6e1aa333d0ca5d7 177 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 128 1.2E-5 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_1114 c7275fe16b71f2feda57024adc7ddbd4 465 Pfam PF00364 Biotin-requiring enzyme 11 82 5.5E-17 T 11-10-2018 IPR000089 Biotin/lipoyl attachment Patl_1114 c7275fe16b71f2feda57024adc7ddbd4 465 Pfam PF02817 e3 binding domain 164 196 3.6E-15 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Patl_1114 c7275fe16b71f2feda57024adc7ddbd4 465 SUPERFAMILY SSF52777 227 465 1.56E-79 T 11-10-2018 Patl_1114 c7275fe16b71f2feda57024adc7ddbd4 465 SUPERFAMILY SSF51230 10 97 4.58E-21 T 11-10-2018 IPR011053 Single hybrid motif Patl_1114 c7275fe16b71f2feda57024adc7ddbd4 465 Gene3D G3DSA:4.10.320.10 164 207 2.1E-16 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Patl_1114 c7275fe16b71f2feda57024adc7ddbd4 465 Gene3D G3DSA:3.30.559.10 222 465 1.1E-87 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Patl_1114 c7275fe16b71f2feda57024adc7ddbd4 465 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 33 62 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Patl_1114 c7275fe16b71f2feda57024adc7ddbd4 465 Gene3D G3DSA:2.40.50.100 8 85 1.3E-19 T 11-10-2018 Patl_1114 c7275fe16b71f2feda57024adc7ddbd4 465 SUPERFAMILY SSF47005 157 202 9.81E-13 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Patl_1114 c7275fe16b71f2feda57024adc7ddbd4 465 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 240 465 2.2E-76 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Patl_3198 6ebdc6f235a85c0190b53b4fc35eb8dd 102 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 37 99 3.7E-21 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain Patl_3198 6ebdc6f235a85c0190b53b4fc35eb8dd 102 SUPERFAMILY SSF47781 24 96 2.22E-27 T 11-10-2018 IPR010994 RuvA domain 2-like Patl_3198 6ebdc6f235a85c0190b53b4fc35eb8dd 102 Pfam PF12836 Helix-hairpin-helix motif 37 99 2.6E-23 T 11-10-2018 Patl_3198 6ebdc6f235a85c0190b53b4fc35eb8dd 102 SMART SM00278 49 68 0.012 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Patl_3198 6ebdc6f235a85c0190b53b4fc35eb8dd 102 SMART SM00278 79 98 0.091 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Patl_3198 6ebdc6f235a85c0190b53b4fc35eb8dd 102 PIRSF PIRSF002134 69 102 0.85 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_3198 6ebdc6f235a85c0190b53b4fc35eb8dd 102 PIRSF PIRSF002134 29 83 0.37 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_3198 6ebdc6f235a85c0190b53b4fc35eb8dd 102 Gene3D G3DSA:1.10.150.320 19 100 2.7E-24 T 11-10-2018 Patl_0143 a5aa6e1c20051065b200858c9d21d078 539 Gene3D G3DSA:1.10.287.950 209 539 5.4E-74 T 11-10-2018 Patl_0143 a5aa6e1c20051065b200858c9d21d078 539 SMART SM00283 277 538 5.0E-78 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_0143 a5aa6e1c20051065b200858c9d21d078 539 SUPERFAMILY SSF58104 230 539 1.96E-78 T 11-10-2018 Patl_0143 a5aa6e1c20051065b200858c9d21d078 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 504 5.5E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_0143 a5aa6e1c20051065b200858c9d21d078 539 SMART SM00304 208 262 9.3E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_0143 a5aa6e1c20051065b200858c9d21d078 539 SMART SM00304 265 322 80.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_3530 e05e04473a5ef721fe26a4736b989004 318 Gene3D G3DSA:3.30.420.310 87 307 3.3E-60 T 11-10-2018 Patl_3530 e05e04473a5ef721fe26a4736b989004 318 Pfam PF05035 2-keto-3-deoxy-galactonokinase 12 300 1.8E-81 T 11-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 Patl_3530 e05e04473a5ef721fe26a4736b989004 318 Gene3D G3DSA:3.30.420.300 2 86 6.1E-12 T 11-10-2018 Patl_2198 be04bf7435b73feafd81893fd873b63a 549 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 211 316 1.6E-14 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_2198 be04bf7435b73feafd81893fd873b63a 549 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 322 442 1.3E-28 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_2198 be04bf7435b73feafd81893fd873b63a 549 Gene3D G3DSA:3.40.120.10 17 221 3.9E-72 T 11-10-2018 Patl_2198 be04bf7435b73feafd81893fd873b63a 549 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 545 1.3E-259 T 11-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 Patl_2198 be04bf7435b73feafd81893fd873b63a 549 Gene3D G3DSA:3.40.120.10 222 319 1.7E-42 T 11-10-2018 Patl_2198 be04bf7435b73feafd81893fd873b63a 549 Gene3D G3DSA:3.30.310.50 445 547 4.7E-33 T 11-10-2018 Patl_2198 be04bf7435b73feafd81893fd873b63a 549 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 492 535 3.4E-6 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_2198 be04bf7435b73feafd81893fd873b63a 549 SUPERFAMILY SSF53738 26 236 3.3E-48 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_2198 be04bf7435b73feafd81893fd873b63a 549 Gene3D G3DSA:3.40.120.10 320 444 5.6E-33 T 11-10-2018 Patl_2198 be04bf7435b73feafd81893fd873b63a 549 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 181 2.7E-37 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_2198 be04bf7435b73feafd81893fd873b63a 549 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 141 150 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_2198 be04bf7435b73feafd81893fd873b63a 549 SUPERFAMILY SSF53738 306 449 1.02E-31 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_2198 be04bf7435b73feafd81893fd873b63a 549 SUPERFAMILY SSF55957 435 544 5.36E-19 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_2198 be04bf7435b73feafd81893fd873b63a 549 SUPERFAMILY SSF53738 210 317 1.65E-7 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Patl_1090 e7bd6c51ba93ff11143598e0c72e9192 375 SUPERFAMILY SSF53756 3 366 3.93E-57 T 11-10-2018 Patl_1090 e7bd6c51ba93ff11143598e0c72e9192 375 Gene3D G3DSA:3.40.50.2000 173 353 2.7E-50 T 11-10-2018 Patl_1090 e7bd6c51ba93ff11143598e0c72e9192 375 Pfam PF00534 Glycosyl transferases group 1 190 347 3.2E-28 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Patl_1090 e7bd6c51ba93ff11143598e0c72e9192 375 Gene3D G3DSA:3.40.50.2000 14 363 2.7E-50 T 11-10-2018 Patl_3207 61eafe880733e9b23278d675a546f425 576 Gene3D G3DSA:3.90.550.10 280 537 4.7E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3207 61eafe880733e9b23278d675a546f425 576 Pfam PF00535 Glycosyl transferase family 2 305 481 3.9E-19 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Patl_3207 61eafe880733e9b23278d675a546f425 576 SUPERFAMILY SSF53448 295 556 1.69E-43 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_0446 57b041b8a65fd180eb1e65da4a4d9baf 198 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 70 87 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 Patl_0446 57b041b8a65fd180eb1e65da4a4d9baf 198 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 75 87 8.6E-8 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_0446 57b041b8a65fd180eb1e65da4a4d9baf 198 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 49 64 8.6E-8 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_0446 57b041b8a65fd180eb1e65da4a4d9baf 198 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 8.6E-8 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_0446 57b041b8a65fd180eb1e65da4a4d9baf 198 Gene3D G3DSA:2.40.100.10 32 196 4.2E-51 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Patl_0446 57b041b8a65fd180eb1e65da4a4d9baf 198 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 36 193 2.4E-38 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Patl_0446 57b041b8a65fd180eb1e65da4a4d9baf 198 SUPERFAMILY SSF50891 34 195 2.19E-46 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily Patl_1389 42356796045281e03f5c85c07c9ede94 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 119 1.0E-64 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 Patl_1389 42356796045281e03f5c85c07c9ede94 122 PIRSF PIRSF006287 1 122 1.6E-30 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 Patl_1389 42356796045281e03f5c85c07c9ede94 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 119 9.6E-37 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 Patl_3706 b2284a3a7666255aa17efa698c37456d 284 Gene3D G3DSA:1.10.287.1080 152 283 5.3E-44 T 11-10-2018 Patl_3706 b2284a3a7666255aa17efa698c37456d 284 SUPERFAMILY SSF101386 23 124 6.71E-26 T 11-10-2018 Patl_3706 b2284a3a7666255aa17efa698c37456d 284 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 191 252 4.2E-9 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Patl_3706 b2284a3a7666255aa17efa698c37456d 284 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 47 120 6.9E-27 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Patl_3706 b2284a3a7666255aa17efa698c37456d 284 Gene3D G3DSA:1.10.287.1080 21 144 6.2E-45 T 11-10-2018 Patl_3706 b2284a3a7666255aa17efa698c37456d 284 TIGRFAM TIGR00444 mazG: MazG family protein 30 280 6.7E-97 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG Patl_3706 b2284a3a7666255aa17efa698c37456d 284 SUPERFAMILY SSF101386 159 259 4.86E-23 T 11-10-2018 Patl_4309 5b4101bdc3b425721c113ba96ebb5f69 145 Pfam PF00258 Flavodoxin 6 127 2.6E-22 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Patl_4309 5b4101bdc3b425721c113ba96ebb5f69 145 SUPERFAMILY SSF52218 1 142 3.39E-37 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_4309 5b4101bdc3b425721c113ba96ebb5f69 145 Gene3D G3DSA:3.40.50.360 1 143 4.2E-39 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_2650 497acc675e626efd0dd70a530f99d64c 224 SUPERFAMILY SSF52317 1 222 2.21E-59 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_2650 497acc675e626efd0dd70a530f99d64c 224 Gene3D G3DSA:3.40.50.880 1 223 5.2E-64 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_2650 497acc675e626efd0dd70a530f99d64c 224 Pfam PF01965 DJ-1/PfpI family 24 220 4.6E-15 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Patl_4262 bac0fc4a6607265fdee14bb7e2a9888d 487 SUPERFAMILY SSF55031 243 381 2.79E-10 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Patl_4262 bac0fc4a6607265fdee14bb7e2a9888d 487 Pfam PF07687 Peptidase dimerisation domain 239 382 4.0E-16 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain Patl_4262 bac0fc4a6607265fdee14bb7e2a9888d 487 SUPERFAMILY SSF53187 43 484 1.31E-53 T 11-10-2018 Patl_4262 bac0fc4a6607265fdee14bb7e2a9888d 487 Pfam PF01546 Peptidase family M20/M25/M40 117 482 4.7E-39 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 Patl_4262 bac0fc4a6607265fdee14bb7e2a9888d 487 Gene3D G3DSA:3.40.630.10 41 245 1.0E-45 T 11-10-2018 Patl_3516 f326d11d38d6214dcf28766cbd81d92d 253 Pfam PF08478 POTRA domain, FtsQ-type 48 116 5.1E-17 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type Patl_3516 f326d11d38d6214dcf28766cbd81d92d 253 Gene3D G3DSA:3.40.50.11690 117 247 4.5E-39 T 11-10-2018 Patl_3516 f326d11d38d6214dcf28766cbd81d92d 253 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 17 242 19.998 T 11-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 Patl_3516 f326d11d38d6214dcf28766cbd81d92d 253 Gene3D G3DSA:3.10.20.310 46 116 2.3E-22 T 11-10-2018 Patl_3516 f326d11d38d6214dcf28766cbd81d92d 253 Pfam PF03799 Cell division protein FtsQ 120 234 1.2E-23 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB Patl_3803 d5ca94516342321801d2ed14ad72fe22 807 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 172 9.5E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3803 d5ca94516342321801d2ed14ad72fe22 807 Gene3D G3DSA:2.170.130.10 54 183 9.2E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_3803 d5ca94516342321801d2ed14ad72fe22 807 Pfam PF00593 TonB dependent receptor 312 806 1.9E-27 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3803 d5ca94516342321801d2ed14ad72fe22 807 SUPERFAMILY SSF56935 42 807 1.61E-84 T 11-10-2018 Patl_0589 8033874419b48bd059630159d89fb0f6 112 Pfam PF07238 PilZ domain 5 91 4.6E-7 T 11-10-2018 IPR009875 PilZ domain GO:0035438 Patl_0589 8033874419b48bd059630159d89fb0f6 112 Gene3D G3DSA:2.40.10.220 2 107 8.9E-8 T 11-10-2018 Patl_0589 8033874419b48bd059630159d89fb0f6 112 SUPERFAMILY SSF141371 4 88 8.63E-7 T 11-10-2018 Patl_1710 286dd6d9d0441f8fb488a3760a3c69a8 158 Pfam PF01936 NYN domain 4 152 4.9E-42 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type Patl_1710 286dd6d9d0441f8fb488a3760a3c69a8 158 Gene3D G3DSA:3.40.50.1010 1 157 3.6E-52 T 11-10-2018 Patl_0249 6a2abb5cb2d9d0fef36264595aef894b 145 Gene3D G3DSA:2.60.120.460 8 145 1.0E-40 T 11-10-2018 IPR035917 YjbQ-like superfamily Patl_0249 6a2abb5cb2d9d0fef36264595aef894b 145 SUPERFAMILY SSF111038 7 144 7.98E-47 T 11-10-2018 IPR035917 YjbQ-like superfamily Patl_0249 6a2abb5cb2d9d0fef36264595aef894b 145 Pfam PF01894 Uncharacterised protein family UPF0047 25 141 1.9E-38 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 Patl_0249 6a2abb5cb2d9d0fef36264595aef894b 145 PIRSF PIRSF004681 5 145 1.7E-46 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 Patl_0249 6a2abb5cb2d9d0fef36264595aef894b 145 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 16 144 3.5E-44 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 Patl_4060 d0e1f55d6c27541e10002db3ce69295a 473 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 89 115 3.7E-6 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Patl_4060 d0e1f55d6c27541e10002db3ce69295a 473 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 3.7E-6 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Patl_4060 d0e1f55d6c27541e10002db3ce69295a 473 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 307 326 3.7E-6 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Patl_4060 d0e1f55d6c27541e10002db3ce69295a 473 SUPERFAMILY SSF161070 5 463 1.96E-113 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 Patl_4060 d0e1f55d6c27541e10002db3ce69295a 473 Pfam PF00209 Sodium:neurotransmitter symporter family 144 396 6.8E-27 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Patl_4060 d0e1f55d6c27541e10002db3ce69295a 473 Pfam PF00209 Sodium:neurotransmitter symporter family 5 124 5.8E-23 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Patl_4126 cb6cdfc82ad297b1611b68b3369771d8 460 Pfam PF02321 Outer membrane efflux protein 59 246 1.6E-21 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Patl_4126 cb6cdfc82ad297b1611b68b3369771d8 460 Pfam PF02321 Outer membrane efflux protein 278 441 1.4E-15 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Patl_4126 cb6cdfc82ad297b1611b68b3369771d8 460 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 456 2.2E-85 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Patl_4126 cb6cdfc82ad297b1611b68b3369771d8 460 SUPERFAMILY SSF56954 3 456 2.49E-88 T 11-10-2018 Patl_4126 cb6cdfc82ad297b1611b68b3369771d8 460 Gene3D G3DSA:1.20.1600.10 49 456 9.4E-106 T 11-10-2018 Patl_4126 cb6cdfc82ad297b1611b68b3369771d8 460 Gene3D G3DSA:2.20.200.10 96 345 9.4E-106 T 11-10-2018 Patl_0522 19c8de98496702111a82b3acf0a72e44 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 2.2E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0522 19c8de98496702111a82b3acf0a72e44 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 2.2E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0522 19c8de98496702111a82b3acf0a72e44 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 2.2E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0522 19c8de98496702111a82b3acf0a72e44 219 SUPERFAMILY SSF46894 140 210 1.67E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_0522 19c8de98496702111a82b3acf0a72e44 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 6.1E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0522 19c8de98496702111a82b3acf0a72e44 219 SMART SM00448 2 116 6.7E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0522 19c8de98496702111a82b3acf0a72e44 219 SMART SM00421 148 205 4.6E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_0522 19c8de98496702111a82b3acf0a72e44 219 Pfam PF00072 Response regulator receiver domain 5 116 9.2E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_0522 19c8de98496702111a82b3acf0a72e44 219 Gene3D G3DSA:3.40.50.2300 2 130 6.9E-22 T 11-10-2018 Patl_0522 19c8de98496702111a82b3acf0a72e44 219 Gene3D G3DSA:1.10.10.10 148 217 7.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0522 19c8de98496702111a82b3acf0a72e44 219 SUPERFAMILY SSF52172 1 131 1.29E-22 T 11-10-2018 IPR011006 CheY-like superfamily Patl_0522 19c8de98496702111a82b3acf0a72e44 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Patl_1960 ecadd6001502549abd648512a03b0d85 256 Gene3D G3DSA:3.30.450.40 86 256 3.5E-25 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_1960 ecadd6001502549abd648512a03b0d85 256 Pfam PF09339 IclR helix-turn-helix domain 13 63 6.8E-9 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Patl_1960 ecadd6001502549abd648512a03b0d85 256 SMART SM00346 11 101 2.9E-7 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Patl_1960 ecadd6001502549abd648512a03b0d85 256 SUPERFAMILY SSF46785 11 81 3.64E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1960 ecadd6001502549abd648512a03b0d85 256 Gene3D G3DSA:1.10.10.10 5 78 4.2E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1960 ecadd6001502549abd648512a03b0d85 256 Pfam PF01614 Bacterial transcriptional regulator 134 252 1.8E-9 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal Patl_1960 ecadd6001502549abd648512a03b0d85 256 SUPERFAMILY SSF55781 76 255 7.85E-26 T 11-10-2018 Patl_1161 79a467c084d3fb2a453655d7e12853df 230 SUPERFAMILY SSF46785 88 169 7.1E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1161 79a467c084d3fb2a453655d7e12853df 230 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 223 32.975 T 11-10-2018 IPR007432 Protein of unknown function DUF480 Patl_1161 79a467c084d3fb2a453655d7e12853df 230 Gene3D G3DSA:1.10.10.10 93 172 2.5E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1161 79a467c084d3fb2a453655d7e12853df 230 Pfam PF04337 Protein of unknown function, DUF480 5 156 9.2E-62 T 11-10-2018 IPR007432 Protein of unknown function DUF480 Patl_1161 79a467c084d3fb2a453655d7e12853df 230 Gene3D G3DSA:1.10.10.10 2 87 1.4E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1161 79a467c084d3fb2a453655d7e12853df 230 SUPERFAMILY SSF46785 3 82 1.66E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0752 6cd4fd96f6f3f918bf1e6e9c513c04e7 368 Pfam PF01344 Kelch motif 90 127 2.5E-6 T 11-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Patl_0752 6cd4fd96f6f3f918bf1e6e9c513c04e7 368 Pfam PF01344 Kelch motif 192 241 2.5E-9 T 11-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Patl_0752 6cd4fd96f6f3f918bf1e6e9c513c04e7 368 Pfam PF01344 Kelch motif 245 285 1.4E-7 T 11-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Patl_0752 6cd4fd96f6f3f918bf1e6e9c513c04e7 368 SMART SM00612 254 300 3.7E-7 T 11-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Patl_0752 6cd4fd96f6f3f918bf1e6e9c513c04e7 368 SMART SM00612 150 200 5.3 T 11-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Patl_0752 6cd4fd96f6f3f918bf1e6e9c513c04e7 368 SMART SM00612 201 252 0.11 T 11-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Patl_0752 6cd4fd96f6f3f918bf1e6e9c513c04e7 368 SMART SM00612 102 148 1.0 T 11-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 Patl_0752 6cd4fd96f6f3f918bf1e6e9c513c04e7 368 Gene3D G3DSA:2.120.10.80 165 368 7.2E-35 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Patl_0752 6cd4fd96f6f3f918bf1e6e9c513c04e7 368 SUPERFAMILY SSF50965 85 210 2.35E-18 T 11-10-2018 IPR011043 Galactose oxidase/kelch, beta-propeller Patl_0752 6cd4fd96f6f3f918bf1e6e9c513c04e7 368 Gene3D G3DSA:2.120.10.80 75 164 2.8E-11 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Patl_0752 6cd4fd96f6f3f918bf1e6e9c513c04e7 368 SUPERFAMILY SSF117281 169 366 5.43E-37 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Patl_0451 68685da3de679ac3669c51ffd063e099 393 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 3.2E-38 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Patl_0451 68685da3de679ac3669c51ffd063e099 393 Gene3D G3DSA:3.40.50.720 1 393 4.9E-174 T 11-10-2018 Patl_0451 68685da3de679ac3669c51ffd063e099 393 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 3.0E-113 T 11-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Patl_0451 68685da3de679ac3669c51ffd063e099 393 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 392 54.212 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Patl_0451 68685da3de679ac3669c51ffd063e099 393 Pfam PF07055 Enoyl reductase FAD binding domain 323 385 6.2E-27 T 11-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Patl_1353 fb3773f204f8490a5eecb2f1d6fd91f7 88 SMART SM00530 11 70 6.8E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_1353 fb3773f204f8490a5eecb2f1d6fd91f7 88 SUPERFAMILY SSF47413 6 45 1.69E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_1353 fb3773f204f8490a5eecb2f1d6fd91f7 88 Gene3D G3DSA:1.10.260.40 4 64 5.6E-11 T 11-10-2018 Patl_1353 fb3773f204f8490a5eecb2f1d6fd91f7 88 Pfam PF01381 Helix-turn-helix 12 44 4.0E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_4251 e41ed821708207993b8b175905306975 206 Pfam PF03458 UPF0126 domain 93 164 1.2E-20 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 Patl_4251 e41ed821708207993b8b175905306975 206 Pfam PF03458 UPF0126 domain 7 79 1.4E-21 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 Patl_2431 cc19f3cdff428ef078c6df170d9fcbb3 206 Gene3D G3DSA:2.30.110.10 1 200 5.1E-59 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Patl_2431 cc19f3cdff428ef078c6df170d9fcbb3 206 SUPERFAMILY SSF50475 12 180 2.87E-34 T 11-10-2018 Patl_2431 cc19f3cdff428ef078c6df170d9fcbb3 206 Pfam PF04299 Putative FMN-binding domain 1 157 3.7E-46 T 11-10-2018 IPR007396 Transcriptional regulator PAI 2-type Patl_2431 cc19f3cdff428ef078c6df170d9fcbb3 206 PIRSF PIRSF010372 1 201 1.6E-58 T 11-10-2018 IPR007396 Transcriptional regulator PAI 2-type Patl_0915 e51b36b530b0dc2c66113fd027719da9 346 Pfam PF01594 AI-2E family transporter 17 331 1.6E-43 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like Patl_1186 3ef60868af2f7f47293b4a8eb2031798 305 Gene3D G3DSA:3.90.550.10 2 251 4.2E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_1186 3ef60868af2f7f47293b4a8eb2031798 305 Pfam PF00535 Glycosyl transferase family 2 14 148 2.7E-32 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Patl_1186 3ef60868af2f7f47293b4a8eb2031798 305 SUPERFAMILY SSF53448 13 220 1.64E-41 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_1876 34f4604d8df0076f3f1c14daef35c55a 118 SUPERFAMILY SSF69754 2 99 4.58E-25 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like Patl_1876 34f4604d8df0076f3f1c14daef35c55a 118 Gene3D G3DSA:3.30.160.100 1 102 5.0E-22 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like Patl_1876 34f4604d8df0076f3f1c14daef35c55a 118 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 2.6E-17 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Patl_1876 34f4604d8df0076f3f1c14daef35c55a 118 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 93 5.3E-19 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Patl_2927 6e524bece78166d61491956c30e218da 273 SUPERFAMILY SSF52096 9 270 1.76E-70 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_2927 6e524bece78166d61491956c30e218da 273 Gene3D G3DSA:1.10.12.10 215 272 6.7E-22 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Patl_2927 6e524bece78166d61491956c30e218da 273 Gene3D G3DSA:3.90.226.10 13 214 5.4E-60 T 11-10-2018 Patl_2927 6e524bece78166d61491956c30e218da 273 Pfam PF00378 Enoyl-CoA hydratase/isomerase 22 270 4.2E-50 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Patl_1481 543bc016557a7b843769816abf675e51 382 SUPERFAMILY SSF56796 4 379 1.96E-133 T 11-10-2018 Patl_1481 543bc016557a7b843769816abf675e51 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Patl_1481 543bc016557a7b843769816abf675e51 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Patl_1481 543bc016557a7b843769816abf675e51 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 374 9.1E-127 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Patl_1481 543bc016557a7b843769816abf675e51 382 Gene3D G3DSA:1.20.1090.10 185 381 4.2E-73 T 11-10-2018 Patl_1481 543bc016557a7b843769816abf675e51 382 Gene3D G3DSA:3.40.50.1970 2 183 2.1E-57 T 11-10-2018 Patl_2490 0f05d0a09f43db436ad62760c5f260e8 218 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 9 194 30.193 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Patl_2490 0f05d0a09f43db436ad62760c5f260e8 218 Gene3D G3DSA:3.40.50.170 8 218 6.9E-85 T 11-10-2018 Patl_2490 0f05d0a09f43db436ad62760c5f260e8 218 SUPERFAMILY SSF53328 9 205 2.75E-67 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Patl_2490 0f05d0a09f43db436ad62760c5f260e8 218 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 9 196 2.0E-77 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Patl_2490 0f05d0a09f43db436ad62760c5f260e8 218 Pfam PF00551 Formyl transferase 9 188 1.2E-62 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 Gene3D G3DSA:3.40.50.670 391 624 1.5E-88 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR00418 DNA topoisomerase II family signature 66 79 4.8E-57 T 11-10-2018 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR00418 DNA topoisomerase II family signature 480 496 4.8E-57 T 11-10-2018 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR00418 DNA topoisomerase II family signature 31 46 4.8E-57 T 11-10-2018 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR00418 DNA topoisomerase II family signature 518 530 4.8E-57 T 11-10-2018 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR00418 DNA topoisomerase II family signature 109 123 4.8E-57 T 11-10-2018 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR00418 DNA topoisomerase II family signature 563 579 4.8E-57 T 11-10-2018 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR00418 DNA topoisomerase II family signature 415 429 4.8E-57 T 11-10-2018 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR00418 DNA topoisomerase II family signature 267 280 4.8E-57 T 11-10-2018 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR00418 DNA topoisomerase II family signature 498 515 4.8E-57 T 11-10-2018 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 626 0.0 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 Gene3D G3DSA:3.30.565.10 2 215 1.1E-75 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 SUPERFAMILY SSF55874 4 215 1.58E-65 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 629 46.442 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 SUPERFAMILY SSF56719 389 622 1.02E-76 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 SUPERFAMILY SSF54211 217 382 3.22E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 Gene3D G3DSA:3.30.230.10 216 390 3.4E-52 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 SMART SM00387 27 173 1.0E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 SMART SM00433 34 625 1.9E-201 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 Pfam PF01751 Toprim domain 414 523 6.1E-13 T 11-10-2018 IPR006171 TOPRIM domain Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 Pfam PF00204 DNA gyrase B 218 385 3.1E-38 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 1.6E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 1.6E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 1.6E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.6E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 1.6E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.6E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 1.6E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.6E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 1.6E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 1.6E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.6E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.6E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 1.6E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 1.6E-122 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 9.1E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0435 aa0eadbc43c78d8bf904b5a127066dcc 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 559 621 1.8E-24 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Patl_0469 a228ac3274682c781d8160857b65921c 212 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 40.021 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0469 a228ac3274682c781d8160857b65921c 212 Pfam PF00297 Ribosomal protein L3 102 185 1.3E-16 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0469 a228ac3274682c781d8160857b65921c 212 Gene3D G3DSA:2.40.30.10 133 212 5.6E-19 T 11-10-2018 Patl_0469 a228ac3274682c781d8160857b65921c 212 SUPERFAMILY SSF50447 1 211 2.56E-81 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Patl_0469 a228ac3274682c781d8160857b65921c 212 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site Patl_0469 a228ac3274682c781d8160857b65921c 212 Gene3D G3DSA:2.40.50.620 33 99 1.7E-15 T 11-10-2018 Patl_0469 a228ac3274682c781d8160857b65921c 212 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 6.3E-91 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_2704 26950e793f9b59d68fd4345cf464461f 412 SUPERFAMILY SSF52540 59 203 3.48E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2704 26950e793f9b59d68fd4345cf464461f 412 Gene3D G3DSA:3.40.50.300 23 188 2.9E-20 T 11-10-2018 Patl_2704 26950e793f9b59d68fd4345cf464461f 412 Pfam PF03969 AFG1-like ATPase 352 407 1.5E-17 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 Patl_2704 26950e793f9b59d68fd4345cf464461f 412 Pfam PF03969 AFG1-like ATPase 25 319 9.8E-81 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 Patl_2075 378c58c77925c13649ede782cb42c844 155 SUPERFAMILY SSF47240 1 155 6.2E-44 T 11-10-2018 IPR009078 Ferritin-like superfamily Patl_2075 378c58c77925c13649ede782cb42c844 155 PIRSF PIRSF002560 1 155 1.9E-59 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2075 378c58c77925c13649ede782cb42c844 155 PRINTS PR00601 Bacterioferritin signature 44 64 1.6E-45 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2075 378c58c77925c13649ede782cb42c844 155 PRINTS PR00601 Bacterioferritin signature 65 85 1.6E-45 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2075 378c58c77925c13649ede782cb42c844 155 PRINTS PR00601 Bacterioferritin signature 3 22 1.6E-45 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2075 378c58c77925c13649ede782cb42c844 155 PRINTS PR00601 Bacterioferritin signature 107 127 1.6E-45 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2075 378c58c77925c13649ede782cb42c844 155 PRINTS PR00601 Bacterioferritin signature 129 150 1.6E-45 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2075 378c58c77925c13649ede782cb42c844 155 PRINTS PR00601 Bacterioferritin signature 23 43 1.6E-45 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2075 378c58c77925c13649ede782cb42c844 155 PRINTS PR00601 Bacterioferritin signature 86 106 1.6E-45 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2075 378c58c77925c13649ede782cb42c844 155 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 1.5E-48 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_2075 378c58c77925c13649ede782cb42c844 155 Pfam PF00210 Ferritin-like domain 9 145 2.9E-33 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Patl_2075 378c58c77925c13649ede782cb42c844 155 Gene3D G3DSA:1.20.1260.10 1 155 1.8E-57 T 11-10-2018 IPR012347 Ferritin-like Patl_2075 378c58c77925c13649ede782cb42c844 155 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Patl_3162 a6f4dd895943673bbb4fc6e2ce6f44fa 112 Gene3D G3DSA:3.30.70.120 1 112 1.4E-48 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Patl_3162 a6f4dd895943673bbb4fc6e2ce6f44fa 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Patl_3162 a6f4dd895943673bbb4fc6e2ce6f44fa 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 Patl_3162 a6f4dd895943673bbb4fc6e2ce6f44fa 112 SMART SM00938 4 105 3.6E-68 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Patl_3162 a6f4dd895943673bbb4fc6e2ce6f44fa 112 PRINTS PR00340 P-II protein signature 23 41 1.8E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Patl_3162 a6f4dd895943673bbb4fc6e2ce6f44fa 112 PRINTS PR00340 P-II protein signature 52 75 1.8E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Patl_3162 a6f4dd895943673bbb4fc6e2ce6f44fa 112 PRINTS PR00340 P-II protein signature 83 103 1.8E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Patl_3162 a6f4dd895943673bbb4fc6e2ce6f44fa 112 PRINTS PR00340 P-II protein signature 2 17 1.8E-43 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Patl_3162 a6f4dd895943673bbb4fc6e2ce6f44fa 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 5.2E-45 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Patl_3162 a6f4dd895943673bbb4fc6e2ce6f44fa 112 SUPERFAMILY SSF54913 2 112 5.72E-45 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Patl_3162 a6f4dd895943673bbb4fc6e2ce6f44fa 112 PIRSF PIRSF039144 1 112 5.1E-55 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Patl_2011 64e4c2dd680148afb4525d4940de5254 158 Pfam PF02810 SEC-C motif 141 157 1.7E-9 T 11-10-2018 IPR004027 SEC-C motif Patl_2011 64e4c2dd680148afb4525d4940de5254 158 SUPERFAMILY SSF54427 28 130 1.66E-31 T 11-10-2018 IPR032710 NTF2-like domain superfamily Patl_2011 64e4c2dd680148afb4525d4940de5254 158 Gene3D G3DSA:3.10.450.50 1 158 2.5E-53 T 11-10-2018 Patl_2011 64e4c2dd680148afb4525d4940de5254 158 SUPERFAMILY SSF103642 139 157 7.19E-7 T 11-10-2018 Patl_1370 3978f5e1eeea423bd573d8aea894cb87 291 SUPERFAMILY SSF52096 12 279 9.75E-71 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_1370 3978f5e1eeea423bd573d8aea894cb87 291 Gene3D G3DSA:1.10.12.10 222 280 3.8E-23 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Patl_1370 3978f5e1eeea423bd573d8aea894cb87 291 Gene3D G3DSA:3.90.226.10 9 221 6.2E-58 T 11-10-2018 Patl_1370 3978f5e1eeea423bd573d8aea894cb87 291 Pfam PF00378 Enoyl-CoA hydratase/isomerase 21 279 3.7E-45 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Patl_1179 9b0433aaabbc3de1c162785c1d6be58f 308 SUPERFAMILY SSF53448 4 230 5.53E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_1179 9b0433aaabbc3de1c162785c1d6be58f 308 Pfam PF00535 Glycosyl transferase family 2 5 129 1.4E-24 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Patl_1179 9b0433aaabbc3de1c162785c1d6be58f 308 Gene3D G3DSA:3.90.550.10 2 246 3.5E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_0922 954ec53fef6812323e09a0a831a7c403 319 SUPERFAMILY SSF51412 3 309 9.46E-64 T 11-10-2018 Patl_0922 954ec53fef6812323e09a0a831a7c403 319 Gene3D G3DSA:3.20.20.70 5 313 2.0E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_0922 954ec53fef6812323e09a0a831a7c403 319 Pfam PF03060 Nitronate monooxygenase 85 298 7.3E-38 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Patl_0922 954ec53fef6812323e09a0a831a7c403 319 Pfam PF03060 Nitronate monooxygenase 8 76 9.1E-19 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Patl_4190 236c51cb91500b30e37936ffe08f0a5f 176 Pfam PF05036 Sporulation related domain 98 169 1.8E-16 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 Patl_4190 236c51cb91500b30e37936ffe08f0a5f 176 SUPERFAMILY SSF110997 97 175 1.03E-21 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Patl_4190 236c51cb91500b30e37936ffe08f0a5f 176 Gene3D G3DSA:3.30.70.1070 93 173 1.8E-30 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Patl_3690 30dbad89489d72930903884aaa2ac398 217 SMART SM00702 24 204 4.4E-20 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 Patl_3690 30dbad89489d72930903884aaa2ac398 217 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 113 204 4.5E-19 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 Patl_3690 30dbad89489d72930903884aaa2ac398 217 Gene3D G3DSA:2.60.120.620 13 209 5.7E-50 T 11-10-2018 Patl_1517 02fc090ebb10e405d9309165edfe995d 154 SUPERFAMILY SSF55729 10 153 4.01E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_1517 02fc090ebb10e405d9309165edfe995d 154 Pfam PF00583 Acetyltransferase (GNAT) family 29 132 1.2E-10 T 11-10-2018 IPR000182 GNAT domain Patl_1517 02fc090ebb10e405d9309165edfe995d 154 Gene3D G3DSA:3.40.630.30 2 145 5.2E-22 T 11-10-2018 Patl_2557 40e7f9c16850741fd96de455238fc877 369 Pfam PF04055 Radical SAM superfamily 63 213 5.2E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Patl_2557 40e7f9c16850741fd96de455238fc877 369 SUPERFAMILY SSF102114 18 324 5.49E-91 T 11-10-2018 Patl_2557 40e7f9c16850741fd96de455238fc877 369 TIGRFAM TIGR00433 bioB: biotin synthase 28 323 4.5E-125 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Patl_2557 40e7f9c16850741fd96de455238fc877 369 Hamap MF_01694 Biotin synthase [bioB]. 18 326 41.848 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Patl_2557 40e7f9c16850741fd96de455238fc877 369 PIRSF PIRSF001619 1 332 5.4E-136 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Patl_2557 40e7f9c16850741fd96de455238fc877 369 SMART SM00876 233 325 2.8E-48 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Patl_2557 40e7f9c16850741fd96de455238fc877 369 Gene3D G3DSA:3.20.20.70 17 328 5.1E-130 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2557 40e7f9c16850741fd96de455238fc877 369 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 233 323 9.8E-20 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Patl_2557 40e7f9c16850741fd96de455238fc877 369 SMART SM00729 56 268 1.3E-38 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Patl_3192 d7ecbf9a59d41d99f78b83b84de5815d 186 Hamap MF_01104 Protein Syd [syd]. 3 184 36.237 T 11-10-2018 IPR009948 Syd GO:0009898 Patl_3192 d7ecbf9a59d41d99f78b83b84de5815d 186 Pfam PF07348 Syd protein (SUKH-2) 7 182 5.8E-64 T 11-10-2018 IPR009948 Syd GO:0009898 Patl_3192 d7ecbf9a59d41d99f78b83b84de5815d 186 Gene3D G3DSA:3.40.1580.20 1 184 4.4E-68 T 11-10-2018 IPR038228 Syd superfamily Patl_3280 8aa2c2479ced878984b395e7673135a9 381 Pfam PF16537 Type II secretion system protein B 318 377 3.0E-25 T 11-10-2018 IPR032389 Type II secretion system protein B Patl_0892 e84b5237a9b89a0b0050c43e6d325390 641 SUPERFAMILY SSF51905 48 446 9.9E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0892 e84b5237a9b89a0b0050c43e6d325390 641 Gene3D G3DSA:3.50.50.60 59 223 7.1E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0892 e84b5237a9b89a0b0050c43e6d325390 641 Gene3D G3DSA:2.60.120.260 488 640 1.2E-6 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0892 e84b5237a9b89a0b0050c43e6d325390 641 Pfam PF12831 FAD dependent oxidoreductase 62 472 1.7E-92 T 11-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal Patl_0765 f2bb766a87945094e3348a926e772c7f 601 Gene3D G3DSA:3.30.565.10 449 601 4.6E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0765 f2bb766a87945094e3348a926e772c7f 601 Gene3D G3DSA:3.30.450.40 135 316 6.8E-6 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_0765 f2bb766a87945094e3348a926e772c7f 601 Pfam PF00512 His Kinase A (phospho-acceptor) domain 341 439 1.9E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_0765 f2bb766a87945094e3348a926e772c7f 601 SMART SM00387 488 600 3.5E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0765 f2bb766a87945094e3348a926e772c7f 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 557 3.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0765 f2bb766a87945094e3348a926e772c7f 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 543 3.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0765 f2bb766a87945094e3348a926e772c7f 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 597 3.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0765 f2bb766a87945094e3348a926e772c7f 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 578 3.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0765 f2bb766a87945094e3348a926e772c7f 601 SUPERFAMILY SSF47384 333 385 1.26E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_0765 f2bb766a87945094e3348a926e772c7f 601 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 493 598 3.0E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0765 f2bb766a87945094e3348a926e772c7f 601 SUPERFAMILY SSF55874 436 598 1.83E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0765 f2bb766a87945094e3348a926e772c7f 601 Gene3D G3DSA:1.10.287.130 317 443 1.6E-21 T 11-10-2018 Patl_1873 460248c0598e8cd862ada4d6d5c4fc63 692 Pfam PF12801 4Fe-4S binding domain 482 527 4.6E-14 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Patl_1873 460248c0598e8cd862ada4d6d5c4fc63 692 Pfam PF12801 4Fe-4S binding domain 583 626 4.3E-4 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Patl_1873 460248c0598e8cd862ada4d6d5c4fc63 692 SUPERFAMILY SSF54862 495 667 8.49E-7 T 11-10-2018 Patl_1873 460248c0598e8cd862ada4d6d5c4fc63 692 Pfam PF04205 FMN-binding domain 78 164 1.5E-6 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Patl_1873 460248c0598e8cd862ada4d6d5c4fc63 692 PIRSF PIRSF036354 2 691 1.0E-180 T 11-10-2018 IPR011399 Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0016020|GO:0045893 Patl_1873 460248c0598e8cd862ada4d6d5c4fc63 692 SMART SM00900 77 172 1.6E-11 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Patl_4243 1fba34b49b31767a29e553bac5a8aaaa 293 Gene3D G3DSA:1.10.287.70 1 76 5.5E-18 T 11-10-2018 Patl_4243 1fba34b49b31767a29e553bac5a8aaaa 293 Gene3D G3DSA:1.20.120.80 78 293 6.7E-64 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4243 1fba34b49b31767a29e553bac5a8aaaa 293 SUPERFAMILY SSF81452 6 292 1.44E-80 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4243 1fba34b49b31767a29e553bac5a8aaaa 293 Pfam PF00510 Cytochrome c oxidase subunit III 9 292 1.5E-48 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_0411 90df67c9e8a233382744165dc2ca8acc 357 Gene3D G3DSA:3.40.640.10 2 269 5.2E-57 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_0411 90df67c9e8a233382744165dc2ca8acc 357 Gene3D G3DSA:3.90.1150.10 270 356 5.2E-57 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_0411 90df67c9e8a233382744165dc2ca8acc 357 Pfam PF00266 Aminotransferase class-V 81 284 6.5E-24 T 11-10-2018 IPR000192 Aminotransferase class V domain Patl_0411 90df67c9e8a233382744165dc2ca8acc 357 SUPERFAMILY SSF53383 21 356 4.45E-60 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_1959 33712ee9d0df914d2aa15613fd98b630 260 Pfam PF07295 Zinc-ribbon containing domain 23 119 9.4E-9 T 11-10-2018 IPR009912 Zinc-ribbon containing domain Patl_4003 27c37f7532b9915f34ceb7757a794867 392 SUPERFAMILY SSF53383 8 386 8.39E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_4003 27c37f7532b9915f34ceb7757a794867 392 Gene3D G3DSA:3.90.1150.10 257 391 1.4E-15 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_4003 27c37f7532b9915f34ceb7757a794867 392 Gene3D G3DSA:3.40.640.10 5 256 3.5E-87 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_4003 27c37f7532b9915f34ceb7757a794867 392 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 382 3.0E-93 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Patl_4003 27c37f7532b9915f34ceb7757a794867 392 PIRSF PIRSF000390 2 390 6.1E-108 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase Patl_2252 58800bcdaaf47386b85af7494e029002 410 Pfam PF00512 His Kinase A (phospho-acceptor) domain 204 269 1.7E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2252 58800bcdaaf47386b85af7494e029002 410 Gene3D G3DSA:3.30.565.10 268 406 7.8E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2252 58800bcdaaf47386b85af7494e029002 410 SUPERFAMILY SSF47384 184 268 6.28E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_2252 58800bcdaaf47386b85af7494e029002 410 SMART SM00388 201 270 4.1E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_2252 58800bcdaaf47386b85af7494e029002 410 Gene3D G3DSA:1.10.287.130 152 267 2.4E-15 T 11-10-2018 Patl_2252 58800bcdaaf47386b85af7494e029002 410 SUPERFAMILY SSF55874 270 399 4.24E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_1244 21313786a98cdf9a97cc6700d00b7303 96 Pfam PF07130 YebG protein 1 74 9.8E-28 T 11-10-2018 IPR009813 Uncharacterised protein family YebG Patl_1244 21313786a98cdf9a97cc6700d00b7303 96 Gene3D G3DSA:1.10.10.710 21 90 1.9E-12 T 11-10-2018 IPR038627 YebG-like superfamily Patl_1574 fddce4e892de7bed40a89693e51e9988 249 Pfam PF00121 Triosephosphate isomerase 9 244 7.4E-86 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1574 fddce4e892de7bed40a89693e51e9988 249 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 6 246 58.161 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1574 fddce4e892de7bed40a89693e51e9988 249 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 9 238 6.8E-62 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1574 fddce4e892de7bed40a89693e51e9988 249 ProSitePatterns PS00171 Triosephosphate isomerase active site. 163 173 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_1574 fddce4e892de7bed40a89693e51e9988 249 Gene3D G3DSA:3.20.20.70 1 249 6.5E-93 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_1574 fddce4e892de7bed40a89693e51e9988 249 SUPERFAMILY SSF51351 6 246 1.83E-88 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_2575 63ed92f38cc9b4ae278a0b57bd46fdce 471 PRINTS PR00175 Sodium/alanine symporter signature 302 320 3.3E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_2575 63ed92f38cc9b4ae278a0b57bd46fdce 471 PRINTS PR00175 Sodium/alanine symporter signature 181 199 3.3E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_2575 63ed92f38cc9b4ae278a0b57bd46fdce 471 PRINTS PR00175 Sodium/alanine symporter signature 209 228 3.3E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_2575 63ed92f38cc9b4ae278a0b57bd46fdce 471 PRINTS PR00175 Sodium/alanine symporter signature 90 112 3.3E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_2575 63ed92f38cc9b4ae278a0b57bd46fdce 471 PRINTS PR00175 Sodium/alanine symporter signature 347 369 3.3E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_2575 63ed92f38cc9b4ae278a0b57bd46fdce 471 PRINTS PR00175 Sodium/alanine symporter signature 408 428 3.3E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_2575 63ed92f38cc9b4ae278a0b57bd46fdce 471 Pfam PF01235 Sodium:alanine symporter family 51 448 2.4E-149 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_2575 63ed92f38cc9b4ae278a0b57bd46fdce 471 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 90 105 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_2575 63ed92f38cc9b4ae278a0b57bd46fdce 471 TIGRFAM TIGR00835 agcS: amino acid carrier protein 19 439 8.2E-144 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Patl_0021 ff62657cb5f04774db721bc510b1d170 437 Gene3D G3DSA:1.10.940.10 7 145 4.4E-37 T 11-10-2018 IPR035926 NusB-like superfamily Patl_0021 ff62657cb5f04774db721bc510b1d170 437 SUPERFAMILY SSF48013 11 153 6.28E-27 T 11-10-2018 IPR035926 NusB-like superfamily Patl_0021 ff62657cb5f04774db721bc510b1d170 437 Gene3D G3DSA:3.40.50.150 235 437 1.3E-65 T 11-10-2018 Patl_0021 ff62657cb5f04774db721bc510b1d170 437 SUPERFAMILY SSF53335 148 436 1.15E-70 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_0021 ff62657cb5f04774db721bc510b1d170 437 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 14 436 5.8E-123 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 Patl_0021 ff62657cb5f04774db721bc510b1d170 437 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 321 332 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 Patl_0021 ff62657cb5f04774db721bc510b1d170 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 322 334 2.2E-29 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Patl_0021 ff62657cb5f04774db721bc510b1d170 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 419 436 2.2E-29 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Patl_0021 ff62657cb5f04774db721bc510b1d170 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 372 388 2.2E-29 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Patl_0021 ff62657cb5f04774db721bc510b1d170 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 255 265 2.2E-29 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Patl_0021 ff62657cb5f04774db721bc510b1d170 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 226 240 2.2E-29 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Patl_0021 ff62657cb5f04774db721bc510b1d170 437 Pfam PF01189 16S rRNA methyltransferase RsmB/F 245 434 8.0E-68 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Patl_0021 ff62657cb5f04774db721bc510b1d170 437 Gene3D G3DSA:3.30.70.1170 177 234 5.3E-15 T 11-10-2018 Patl_0021 ff62657cb5f04774db721bc510b1d170 437 Pfam PF01029 NusB family 11 132 4.5E-20 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Patl_1716 aa16a019564861a4cb801da16f5d7d8f 332 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 332 46.45 T 11-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 Patl_1716 aa16a019564861a4cb801da16f5d7d8f 332 SUPERFAMILY SSF51445 1 287 4.0E-79 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_1716 aa16a019564861a4cb801da16f5d7d8f 332 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 8 286 7.9E-75 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 Patl_1716 aa16a019564861a4cb801da16f5d7d8f 332 Gene3D G3DSA:3.20.20.300 1 332 7.5E-112 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 Patl_2969 e6c71d61e1febf25e9fe7175e4c5b967 215 SMART SM00900 101 193 5.0E-33 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Patl_2969 e6c71d61e1febf25e9fe7175e4c5b967 215 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 194 8.0E-63 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Patl_2969 e6c71d61e1febf25e9fe7175e4c5b967 215 PIRSF PIRSF006091 1 207 4.2E-81 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Patl_2969 e6c71d61e1febf25e9fe7175e4c5b967 215 Pfam PF04205 FMN-binding domain 101 188 1.0E-19 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Patl_2969 e6c71d61e1febf25e9fe7175e4c5b967 215 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 195 25.991 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 Patl_1586 bb78d42013997ab2ea39a0e7c64c38c9 736 Pfam PF01432 Peptidase family M3 275 723 6.9E-126 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Patl_1586 bb78d42013997ab2ea39a0e7c64c38c9 736 SUPERFAMILY SSF55486 51 723 7.85E-183 T 11-10-2018 Patl_1586 bb78d42013997ab2ea39a0e7c64c38c9 736 Gene3D G3DSA:1.10.1370.10 192 656 3.0E-235 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Patl_1586 bb78d42013997ab2ea39a0e7c64c38c9 736 Gene3D G3DSA:1.10.1370.40 81 718 3.0E-235 T 11-10-2018 Patl_0137 92ad355b97a71afdbf32a3e8b96fc34f 278 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 259 1.5E-84 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 Patl_0137 92ad355b97a71afdbf32a3e8b96fc34f 278 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 9 261 36.671 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 Patl_0137 92ad355b97a71afdbf32a3e8b96fc34f 278 Gene3D G3DSA:3.40.190.80 160 264 3.4E-21 T 11-10-2018 Patl_0137 92ad355b97a71afdbf32a3e8b96fc34f 278 Pfam PF00459 Inositol monophosphatase family 9 250 1.1E-46 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_0137 92ad355b97a71afdbf32a3e8b96fc34f 278 Gene3D G3DSA:3.30.540.10 5 159 6.0E-48 T 11-10-2018 Patl_0137 92ad355b97a71afdbf32a3e8b96fc34f 278 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 9.5E-13 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_0137 92ad355b97a71afdbf32a3e8b96fc34f 278 PRINTS PR00377 Inositol monophosphatase superfamily signature 88 104 9.5E-13 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_0137 92ad355b97a71afdbf32a3e8b96fc34f 278 PRINTS PR00377 Inositol monophosphatase superfamily signature 216 240 9.5E-13 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_0137 92ad355b97a71afdbf32a3e8b96fc34f 278 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 9.5E-13 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_0137 92ad355b97a71afdbf32a3e8b96fc34f 278 PRINTS PR00377 Inositol monophosphatase superfamily signature 184 205 9.5E-13 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Patl_0137 92ad355b97a71afdbf32a3e8b96fc34f 278 SUPERFAMILY SSF56655 7 272 1.23E-70 T 11-10-2018 Patl_2913 84677f2bcfb7ba9c7dd60522551fba9a 241 SMART SM00382 30 216 7.6E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2913 84677f2bcfb7ba9c7dd60522551fba9a 241 Pfam PF00005 ABC transporter 21 167 6.6E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_2913 84677f2bcfb7ba9c7dd60522551fba9a 241 SUPERFAMILY SSF52540 1 221 2.1E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2913 84677f2bcfb7ba9c7dd60522551fba9a 241 Gene3D G3DSA:3.40.50.300 1 228 1.5E-67 T 11-10-2018 Patl_2913 84677f2bcfb7ba9c7dd60522551fba9a 241 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_0550 2371471bb21d6f9869cacce25a3918fb 243 Gene3D G3DSA:1.10.10.200 17 78 2.2E-18 T 11-10-2018 IPR017856 Integrase-like, N-terminal Patl_0550 2371471bb21d6f9869cacce25a3918fb 243 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 27.584 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_0550 2371471bb21d6f9869cacce25a3918fb 243 Gene3D G3DSA:3.30.70.980 83 235 2.1E-43 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_0550 2371471bb21d6f9869cacce25a3918fb 243 Pfam PF01709 Transcriptional regulator 4 236 1.5E-74 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_0550 2371471bb21d6f9869cacce25a3918fb 243 Gene3D G3DSA:3.30.70.980 127 204 2.1E-43 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_0550 2371471bb21d6f9869cacce25a3918fb 243 SUPERFAMILY SSF75625 1 237 4.97E-75 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4053 aa441d8ab6a19955001f4cbf7c8189d9 184 TIGRFAM TIGR04026 PPOX_FMN_cyano: PPOX class probable FMN-dependent enzyme, alr4036 family 5 184 6.3E-45 T 11-10-2018 IPR024015 Pyridoxamine 5'-phosphate oxidase, probable FMN-dependent, Alr4036 family KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282 Patl_4053 aa441d8ab6a19955001f4cbf7c8189d9 184 SUPERFAMILY SSF50475 5 184 3.54E-30 T 11-10-2018 Patl_4053 aa441d8ab6a19955001f4cbf7c8189d9 184 Pfam PF12766 Pyridoxamine 5'-phosphate oxidase 5 97 6.0E-28 T 11-10-2018 IPR024624 Pyridoxamine 5'-phosphate oxidase, Alr4036 family, FMN-binding domain GO:0010181 Patl_4053 aa441d8ab6a19955001f4cbf7c8189d9 184 Gene3D G3DSA:2.30.110.10 2 184 6.7E-47 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Patl_2502 30d64fe572df34cf6bbea3aba2fe64c1 346 Pfam PF11279 Protein of unknown function (DUF3080) 36 343 4.0E-94 T 11-10-2018 IPR021431 Protein of unknown function DUF3080 Patl_4250 90ab61b86fa06079921ff8b1528721f2 615 SUPERFAMILY SSF52016 421 610 1.41E-57 T 11-10-2018 Patl_4250 90ab61b86fa06079921ff8b1528721f2 615 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 609 1.9E-254 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Patl_4250 90ab61b86fa06079921ff8b1528721f2 615 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Patl_4250 90ab61b86fa06079921ff8b1528721f2 615 Gene3D G3DSA:3.50.30.80 421 572 1.8E-51 T 11-10-2018 Patl_4250 90ab61b86fa06079921ff8b1528721f2 615 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Patl_4250 90ab61b86fa06079921ff8b1528721f2 615 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 609 44.457 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Patl_4250 90ab61b86fa06079921ff8b1528721f2 615 SUPERFAMILY SSF143975 3 420 1.83E-134 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Patl_4250 90ab61b86fa06079921ff8b1528721f2 615 Pfam PF00920 Dehydratase family 34 606 7.1E-214 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Patl_1831 6eab2fed91020ee3face5cde92d36801 299 Pfam PF04909 Amidohydrolase 4 298 7.4E-25 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Patl_1831 6eab2fed91020ee3face5cde92d36801 299 SUPERFAMILY SSF51556 2 299 4.96E-34 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_1831 6eab2fed91020ee3face5cde92d36801 299 Gene3D G3DSA:3.20.20.140 2 299 9.2E-55 T 11-10-2018 Patl_3627 f9eb84fbe98102d1d995ea6e5dc4e038 744 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 151 1.9E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3627 f9eb84fbe98102d1d995ea6e5dc4e038 744 SUPERFAMILY SSF56935 33 744 5.7E-101 T 11-10-2018 Patl_3627 f9eb84fbe98102d1d995ea6e5dc4e038 744 Gene3D G3DSA:2.40.170.20 162 744 2.2E-64 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_3627 f9eb84fbe98102d1d995ea6e5dc4e038 744 Pfam PF00593 TonB dependent receptor 199 743 3.5E-41 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3627 f9eb84fbe98102d1d995ea6e5dc4e038 744 Gene3D G3DSA:2.170.130.10 42 161 1.3E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_3044 764ed1d54752c28ada97e4e73f1c0b4e 444 Gene3D G3DSA:3.40.50.12240 18 439 1.7E-155 T 11-10-2018 Patl_3044 764ed1d54752c28ada97e4e73f1c0b4e 444 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 13 435 3.4E-175 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_3044 764ed1d54752c28ada97e4e73f1c0b4e 444 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 358 3.7E-73 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_3044 764ed1d54752c28ada97e4e73f1c0b4e 444 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_3044 764ed1d54752c28ada97e4e73f1c0b4e 444 SUPERFAMILY SSF52540 94 364 3.63E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3044 764ed1d54752c28ada97e4e73f1c0b4e 444 SMART SM00382 159 342 6.8E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3044 764ed1d54752c28ada97e4e73f1c0b4e 444 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 25 436 1.3E-199 T 11-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Patl_0616 0dbf3314bc789f1ef91d13c580b52a25 595 Gene3D G3DSA:3.40.640.10 131 409 2.0E-46 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_0616 0dbf3314bc789f1ef91d13c580b52a25 595 Gene3D G3DSA:3.90.1150.10 410 547 2.3E-15 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_0616 0dbf3314bc789f1ef91d13c580b52a25 595 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 137 543 5.8E-58 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Patl_0616 0dbf3314bc789f1ef91d13c580b52a25 595 SUPERFAMILY SSF53383 143 545 1.36E-47 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_4000 b493ed6c6357af724de4f01ec210c44a 708 Pfam PF02706 Chain length determinant protein 14 105 1.7E-9 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Patl_4000 b493ed6c6357af724de4f01ec210c44a 708 Pfam PF13807 G-rich domain on putative tyrosine kinase 364 438 7.6E-10 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain Patl_4000 b493ed6c6357af724de4f01ec210c44a 708 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 495 686 1.5E-39 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 Patl_4000 b493ed6c6357af724de4f01ec210c44a 708 SUPERFAMILY SSF52540 514 693 1.59E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4000 b493ed6c6357af724de4f01ec210c44a 708 Gene3D G3DSA:3.40.50.300 449 696 6.3E-51 T 11-10-2018 Patl_1045 8717b2569e8a2970d828ee8835069d66 172 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 11 135 5.6E-29 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Patl_1045 8717b2569e8a2970d828ee8835069d66 172 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 91 102 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Patl_1045 8717b2569e8a2970d828ee8835069d66 172 Gene3D G3DSA:3.30.70.560 8 161 2.4E-36 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Patl_1045 8717b2569e8a2970d828ee8835069d66 172 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 11 135 2.9E-26 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Patl_1045 8717b2569e8a2970d828ee8835069d66 172 SUPERFAMILY SSF55083 8 161 1.96E-43 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Patl_1511 23b1c51558f1897591c1fcefcd57da4b 472 SUPERFAMILY SSF103378 21 462 2.62E-83 T 11-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 Patl_1511 23b1c51558f1897591c1fcefcd57da4b 472 Pfam PF03972 MmgE/PrpD family 26 437 5.8E-91 T 11-10-2018 IPR005656 MmgE/PrpD GO:0016829 Patl_1511 23b1c51558f1897591c1fcefcd57da4b 472 Gene3D G3DSA:1.10.4100.10 43 425 1.6E-85 T 11-10-2018 Patl_1511 23b1c51558f1897591c1fcefcd57da4b 472 Gene3D G3DSA:3.30.1330.120 283 414 1.6E-85 T 11-10-2018 Patl_3436 5d6349e7240a9ee95614e46130f29917 310 Gene3D G3DSA:3.40.50.1110 33 290 1.3E-62 T 11-10-2018 IPR036514 SGNH hydrolase superfamily Patl_3436 5d6349e7240a9ee95614e46130f29917 310 SUPERFAMILY SSF52266 46 284 1.2E-20 T 11-10-2018 Patl_3436 5d6349e7240a9ee95614e46130f29917 310 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 47 278 1.2E-10 T 11-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 Patl_3436 5d6349e7240a9ee95614e46130f29917 310 Pfam PF07589 PEP-CTERM motif 284 306 4.1E-5 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Patl_3436 5d6349e7240a9ee95614e46130f29917 310 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 285 307 0.0012 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Patl_3436 5d6349e7240a9ee95614e46130f29917 310 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 46 57 - T 11-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 Patl_1808 836850b9671bb11eaec70c7b1debce3b 334 SUPERFAMILY SSF51679 7 327 3.66E-84 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Patl_1808 836850b9671bb11eaec70c7b1debce3b 334 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 7 327 6.0E-128 T 11-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 Patl_1808 836850b9671bb11eaec70c7b1debce3b 334 Pfam PF00296 Luciferase-like monooxygenase 23 303 1.6E-35 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Patl_1808 836850b9671bb11eaec70c7b1debce3b 334 Gene3D G3DSA:3.20.20.30 4 333 1.1E-93 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Patl_1066 d6cf01820e06d8b19df92aa7ceaec4ef 189 SUPERFAMILY SSF52833 5 189 3.17E-56 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_1066 d6cf01820e06d8b19df92aa7ceaec4ef 189 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 158 184 4.7E-6 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_1066 d6cf01820e06d8b19df92aa7ceaec4ef 189 Pfam PF00578 AhpC/TSA family 13 134 3.3E-34 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_1066 d6cf01820e06d8b19df92aa7ceaec4ef 189 PIRSF PIRSF000239 1 189 5.5E-54 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_1066 d6cf01820e06d8b19df92aa7ceaec4ef 189 Gene3D G3DSA:3.40.30.10 1 188 1.9E-62 T 11-10-2018 Patl_1066 d6cf01820e06d8b19df92aa7ceaec4ef 189 TIGRFAM TIGR03137 AhpC: peroxiredoxin 4 189 9.3E-101 T 11-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Patl_1099 5bd2c2a855975a6ded072cd31905ea6b 304 SUPERFAMILY SSF52540 31 288 3.61E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1099 5bd2c2a855975a6ded072cd31905ea6b 304 Pfam PF00685 Sulfotransferase domain 34 289 3.9E-8 T 11-10-2018 IPR000863 Sulfotransferase domain GO:0008146 Patl_1099 5bd2c2a855975a6ded072cd31905ea6b 304 Gene3D G3DSA:3.40.50.300 19 296 2.9E-19 T 11-10-2018 Patl_3531 0ddb8180bf411cbc5abc444a4be3411c 309 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 22 271 8.2E-65 T 11-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region Patl_3531 0ddb8180bf411cbc5abc444a4be3411c 309 Gene3D G3DSA:2.120.10.30 9 305 1.4E-87 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Patl_3531 0ddb8180bf411cbc5abc444a4be3411c 309 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 23 40 1.9E-30 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Patl_3531 0ddb8180bf411cbc5abc444a4be3411c 309 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 210 227 1.9E-30 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Patl_3531 0ddb8180bf411cbc5abc444a4be3411c 309 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 99 120 1.9E-30 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Patl_3531 0ddb8180bf411cbc5abc444a4be3411c 309 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 252 270 1.9E-30 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Patl_3531 0ddb8180bf411cbc5abc444a4be3411c 309 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 171 191 1.9E-30 T 11-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) Patl_3531 0ddb8180bf411cbc5abc444a4be3411c 309 SUPERFAMILY SSF63829 14 300 7.68E-56 T 11-10-2018 Patl_1239 c0d9a4e071c965e42b7fede406d08dba 126 Gene3D G3DSA:3.90.1010.10 1 126 2.1E-57 T 11-10-2018 Patl_1239 c0d9a4e071c965e42b7fede406d08dba 126 SUPERFAMILY SSF82649 1 125 4.45E-49 T 11-10-2018 Patl_1239 c0d9a4e071c965e42b7fede406d08dba 126 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.7E-66 T 11-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Patl_1239 c0d9a4e071c965e42b7fede406d08dba 126 Pfam PF01592 NifU-like N terminal domain 2 125 1.2E-55 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Patl_4115 1192f55427fe0ae5c99739dff7c00adb 472 SUPERFAMILY SSF56935 60 470 4.71E-5 T 11-10-2018 Patl_3274 b08146ca3097212ad8353c816bee61c4 822 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 317 747 2.0E-167 T 11-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain Patl_3274 b08146ca3097212ad8353c816bee61c4 822 Gene3D G3DSA:2.60.420.10 325 807 0.0 T 11-10-2018 Patl_3274 b08146ca3097212ad8353c816bee61c4 822 Pfam PF06165 Glycosyltransferase family 36 31 273 3.3E-84 T 11-10-2018 IPR010383 Glycosyl hydrolase 94 Patl_3274 b08146ca3097212ad8353c816bee61c4 822 Gene3D G3DSA:2.70.98.40 13 712 0.0 T 11-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily Patl_3274 b08146ca3097212ad8353c816bee61c4 822 SUPERFAMILY SSF74650 12 276 2.86E-82 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Patl_3274 b08146ca3097212ad8353c816bee61c4 822 Gene3D G3DSA:1.20.890.20 277 324 0.0 T 11-10-2018 Patl_3274 b08146ca3097212ad8353c816bee61c4 822 SUPERFAMILY SSF48208 294 817 3.4E-98 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Patl_3274 b08146ca3097212ad8353c816bee61c4 822 Gene3D G3DSA:1.50.10.10 332 747 0.0 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Patl_3274 b08146ca3097212ad8353c816bee61c4 822 SMART SM01068 11 73 1.5E-19 T 11-10-2018 IPR009342 Putative carbohydrate binding domain Patl_0645 36451f15d53d5989b0def45123144654 452 Pfam PF03448 MgtE intracellular N domain 36 137 1.4E-22 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Patl_0645 36451f15d53d5989b0def45123144654 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 17 451 4.7E-91 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 Patl_0645 36451f15d53d5989b0def45123144654 452 SUPERFAMILY SSF54631 138 278 1.89E-29 T 11-10-2018 Patl_0645 36451f15d53d5989b0def45123144654 452 SUPERFAMILY SSF158791 12 136 5.49E-28 T 11-10-2018 Patl_0645 36451f15d53d5989b0def45123144654 452 Pfam PF00571 CBS domain 203 257 2.6E-6 T 11-10-2018 IPR000644 CBS domain Patl_0645 36451f15d53d5989b0def45123144654 452 Pfam PF00571 CBS domain 142 197 2.7E-4 T 11-10-2018 IPR000644 CBS domain Patl_0645 36451f15d53d5989b0def45123144654 452 Gene3D G3DSA:1.10.357.20 277 451 7.6E-46 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain Patl_0645 36451f15d53d5989b0def45123144654 452 SUPERFAMILY SSF161093 280 451 2.75E-45 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 Patl_0645 36451f15d53d5989b0def45123144654 452 Gene3D G3DSA:3.10.580.10 135 262 1.4E-37 T 11-10-2018 Patl_0645 36451f15d53d5989b0def45123144654 452 SMART SM00924 36 139 2.0E-32 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Patl_0645 36451f15d53d5989b0def45123144654 452 Gene3D G3DSA:1.25.60.10 7 134 2.7E-19 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily Patl_0645 36451f15d53d5989b0def45123144654 452 Pfam PF01769 Divalent cation transporter 326 444 1.9E-23 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 Patl_0645 36451f15d53d5989b0def45123144654 452 SMART SM00116 210 258 9.3E-5 T 11-10-2018 IPR000644 CBS domain Patl_0645 36451f15d53d5989b0def45123144654 452 SMART SM00116 146 199 32.0 T 11-10-2018 IPR000644 CBS domain Patl_3990 3b9ff1d68f9d9d77efa388f19bd47dea 585 Pfam PF00691 OmpA family 475 576 1.2E-22 T 11-10-2018 IPR006665 OmpA-like domain Patl_3990 3b9ff1d68f9d9d77efa388f19bd47dea 585 SUPERFAMILY SSF103088 470 570 1.83E-15 T 11-10-2018 IPR036737 OmpA-like domain superfamily Patl_3990 3b9ff1d68f9d9d77efa388f19bd47dea 585 Gene3D G3DSA:3.30.1330.60 461 582 7.0E-17 T 11-10-2018 IPR036737 OmpA-like domain superfamily Patl_0355 262e1546ab73b5c69e1229783ea97d23 131 Gene3D G3DSA:3.10.180.10 2 131 3.8E-31 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_0355 262e1546ab73b5c69e1229783ea97d23 131 SUPERFAMILY SSF54593 6 131 3.49E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_0355 262e1546ab73b5c69e1229783ea97d23 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 126 1.6E-11 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Patl_0886 075b455dd0fbf78efae6bc2456f06476 582 SMART SM00635 192 267 4.3E-8 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 Patl_0886 075b455dd0fbf78efae6bc2456f06476 582 Gene3D G3DSA:2.60.40.1080 200 272 1.1E-13 T 11-10-2018 Patl_0886 075b455dd0fbf78efae6bc2456f06476 582 SUPERFAMILY SSF49373 203 269 1.37E-11 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Patl_0886 075b455dd0fbf78efae6bc2456f06476 582 Pfam PF02368 Bacterial Ig-like domain (group 2) 196 267 1.2E-9 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 Patl_2546 7ca3791eda0a21e10929f19cb6c87ab4 517 PIRSF PIRSF011396 1 514 1.7E-174 T 11-10-2018 IPR033856 Flavin-dependent tryptophan halogenase Patl_2546 7ca3791eda0a21e10929f19cb6c87ab4 517 Gene3D G3DSA:3.50.50.60 2 512 7.4E-184 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2546 7ca3791eda0a21e10929f19cb6c87ab4 517 Pfam PF04820 Tryptophan halogenase 8 467 2.4E-118 T 11-10-2018 IPR006905 Flavin-dependent halogenase Patl_2546 7ca3791eda0a21e10929f19cb6c87ab4 517 SUPERFAMILY SSF51905 7 435 8.03E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1329 c3c225542cf8f2af3c2bae84f1bb5065 238 Gene3D G3DSA:3.40.50.720 1 238 2.7E-51 T 11-10-2018 Patl_1329 c3c225542cf8f2af3c2bae84f1bb5065 238 SUPERFAMILY SSF51735 2 230 5.69E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1329 c3c225542cf8f2af3c2bae84f1bb5065 238 Pfam PF00106 short chain dehydrogenase 2 179 5.8E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1329 c3c225542cf8f2af3c2bae84f1bb5065 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 5.3E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1329 c3c225542cf8f2af3c2bae84f1bb5065 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 176 5.3E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1329 c3c225542cf8f2af3c2bae84f1bb5065 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 157 5.3E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1329 c3c225542cf8f2af3c2bae84f1bb5065 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 5.3E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_4292 b64ce136b1518944bf2c18f0a4f8a535 196 Pfam PF03942 DTW domain 3 184 1.7E-40 T 11-10-2018 IPR005636 DTW Patl_4292 b64ce136b1518944bf2c18f0a4f8a535 196 SMART SM01144 2 191 6.2E-51 T 11-10-2018 IPR005636 DTW Patl_3951 c4f33f9cb47ff97c20ae50c373452ecd 322 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 3.4E-11 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Patl_3951 c4f33f9cb47ff97c20ae50c373452ecd 322 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 3.4E-11 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Patl_3951 c4f33f9cb47ff97c20ae50c373452ecd 322 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 3.4E-11 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Patl_3951 c4f33f9cb47ff97c20ae50c373452ecd 322 Gene3D G3DSA:3.40.50.1820 1 315 2.8E-82 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3951 c4f33f9cb47ff97c20ae50c373452ecd 322 Pfam PF00561 alpha/beta hydrolase fold 36 299 2.8E-26 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_3951 c4f33f9cb47ff97c20ae50c373452ecd 322 SUPERFAMILY SSF53474 3 300 2.39E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3951 c4f33f9cb47ff97c20ae50c373452ecd 322 PIRSF PIRSF006431 1 318 1.7E-113 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 Patl_3951 c4f33f9cb47ff97c20ae50c373452ecd 322 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 312 3.8E-105 T 11-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 Patl_1669 a10540e015f60a6cf75b448af58ac908 262 Pfam PF01578 Cytochrome C assembly protein 46 260 1.3E-33 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Patl_0880 9157d45948527ce47ba72c3f0bdbe78a 333 SUPERFAMILY SSF49899 27 328 6.27E-45 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Patl_0880 9157d45948527ce47ba72c3f0bdbe78a 333 Pfam PF00722 Glycosyl hydrolases family 16 142 256 2.8E-13 T 11-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 Patl_0880 9157d45948527ce47ba72c3f0bdbe78a 333 Gene3D G3DSA:2.60.120.200 21 328 3.2E-51 T 11-10-2018 Patl_1883 0ba5df87a718b1283937dbcca3a3a7a1 150 SUPERFAMILY SSF54909 62 143 1.47E-19 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_1883 0ba5df87a718b1283937dbcca3a3a7a1 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.1E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_1883 0ba5df87a718b1283937dbcca3a3a7a1 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.1E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_1883 0ba5df87a718b1283937dbcca3a3a7a1 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.1E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_1883 0ba5df87a718b1283937dbcca3a3a7a1 150 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 4.7E-18 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Patl_1883 0ba5df87a718b1283937dbcca3a3a7a1 150 SMART SM00344 1 110 1.6E-42 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Patl_1883 0ba5df87a718b1283937dbcca3a3a7a1 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Patl_1883 0ba5df87a718b1283937dbcca3a3a7a1 150 SUPERFAMILY SSF46785 1 91 8.44E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1883 0ba5df87a718b1283937dbcca3a3a7a1 150 Gene3D G3DSA:3.30.70.920 54 137 6.8E-22 T 11-10-2018 Patl_1883 0ba5df87a718b1283937dbcca3a3a7a1 150 Gene3D G3DSA:1.10.10.10 1 53 8.3E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1883 0ba5df87a718b1283937dbcca3a3a7a1 150 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 2.3E-19 T 11-10-2018 Patl_3661 22b7d4aba16011f68d3c8ced157a976c 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 245 9.3E-63 T 11-10-2018 Patl_3661 22b7d4aba16011f68d3c8ced157a976c 248 Gene3D G3DSA:3.40.50.720 1 247 2.1E-79 T 11-10-2018 Patl_3661 22b7d4aba16011f68d3c8ced157a976c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.6E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3661 22b7d4aba16011f68d3c8ced157a976c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.6E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3661 22b7d4aba16011f68d3c8ced157a976c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.6E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3661 22b7d4aba16011f68d3c8ced157a976c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.6E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3661 22b7d4aba16011f68d3c8ced157a976c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.6E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3661 22b7d4aba16011f68d3c8ced157a976c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.6E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3661 22b7d4aba16011f68d3c8ced157a976c 248 SUPERFAMILY SSF51735 4 246 1.15E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2246 faeb811d57aeb4a7012d0e76a2813bbc 763 SMART SM00052 493 738 2.2E-87 T 11-10-2018 IPR001633 EAL domain Patl_2246 faeb811d57aeb4a7012d0e76a2813bbc 763 SUPERFAMILY SSF141868 501 750 5.23E-75 T 11-10-2018 IPR035919 EAL domain superfamily Patl_2246 faeb811d57aeb4a7012d0e76a2813bbc 763 Gene3D G3DSA:3.30.70.270 326 479 2.8E-12 T 11-10-2018 Patl_2246 faeb811d57aeb4a7012d0e76a2813bbc 763 SMART SM00267 320 493 6.8E-4 T 11-10-2018 IPR000160 GGDEF domain Patl_2246 faeb811d57aeb4a7012d0e76a2813bbc 763 Pfam PF00563 EAL domain 501 733 3.3E-63 T 11-10-2018 IPR001633 EAL domain Patl_2246 faeb811d57aeb4a7012d0e76a2813bbc 763 Gene3D G3DSA:3.20.20.450 496 754 4.4E-80 T 11-10-2018 IPR035919 EAL domain superfamily Patl_2246 faeb811d57aeb4a7012d0e76a2813bbc 763 Pfam PF00990 Diguanylate cyclase, GGDEF domain 333 473 1.5E-8 T 11-10-2018 IPR000160 GGDEF domain Patl_2246 faeb811d57aeb4a7012d0e76a2813bbc 763 SUPERFAMILY SSF55073 338 472 1.57E-10 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_4258 37317d7aa3902db36a04a50ea88fbe83 410 Pfam PF07690 Major Facilitator Superfamily 21 360 3.4E-34 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_4258 37317d7aa3902db36a04a50ea88fbe83 410 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 21 402 3.4E-63 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Patl_4258 37317d7aa3902db36a04a50ea88fbe83 410 SUPERFAMILY SSF103473 21 403 1.83E-48 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_4258 37317d7aa3902db36a04a50ea88fbe83 410 Gene3D G3DSA:1.20.1720.10 21 403 2.9E-80 T 11-10-2018 Patl_2313 403d5c7a38a9f06d54ae9f70dbe163d2 275 Pfam PF00486 Transcriptional regulatory protein, C terminal 192 268 5.2E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_2313 403d5c7a38a9f06d54ae9f70dbe163d2 275 Gene3D G3DSA:1.10.10.10 165 273 2.3E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2313 403d5c7a38a9f06d54ae9f70dbe163d2 275 SMART SM00862 192 268 1.2E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Patl_2313 403d5c7a38a9f06d54ae9f70dbe163d2 275 SUPERFAMILY SSF46894 170 270 9.92E-23 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Patl_2189 8ad01f3a41ac3425a8f648f89ca06bfc 148 SUPERFAMILY SSF54637 3 131 5.42E-32 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_2189 8ad01f3a41ac3425a8f648f89ca06bfc 148 Pfam PF03061 Thioesterase superfamily 18 98 1.3E-10 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Patl_2189 8ad01f3a41ac3425a8f648f89ca06bfc 148 Gene3D G3DSA:3.10.129.10 2 134 5.6E-30 T 11-10-2018 Patl_2189 8ad01f3a41ac3425a8f648f89ca06bfc 148 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 117 1.4E-20 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 Patl_2161 0ef6dcab02c6d3e92e7024dbcc9bb7da 296 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 43 158 3.0E-6 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Patl_2161 0ef6dcab02c6d3e92e7024dbcc9bb7da 296 SUPERFAMILY SSF52540 18 259 8.85E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2161 0ef6dcab02c6d3e92e7024dbcc9bb7da 296 Gene3D G3DSA:3.40.50.300 17 294 2.9E-76 T 11-10-2018 Patl_4138 2dea207be263decda92fce7aa57819f6 325 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 112 315 7.6E-14 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Patl_4138 2dea207be263decda92fce7aa57819f6 325 Gene3D G3DSA:3.60.10.10 98 325 3.2E-20 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Patl_4138 2dea207be263decda92fce7aa57819f6 325 SUPERFAMILY SSF56219 99 322 4.71E-30 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Patl_3891 50e9c81f64ee0a47df8637e020b25c7a 400 SUPERFAMILY SSF53850 187 397 2.9E-30 T 11-10-2018 Patl_3891 50e9c81f64ee0a47df8637e020b25c7a 400 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3891 50e9c81f64ee0a47df8637e020b25c7a 400 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3891 50e9c81f64ee0a47df8637e020b25c7a 400 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.3E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3891 50e9c81f64ee0a47df8637e020b25c7a 400 SUPERFAMILY SSF46785 4 86 6.53E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3891 50e9c81f64ee0a47df8637e020b25c7a 400 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.1E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3891 50e9c81f64ee0a47df8637e020b25c7a 400 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 102 159 1.5E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_3891 50e9c81f64ee0a47df8637e020b25c7a 400 Gene3D G3DSA:1.10.10.10 3 91 1.3E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3891 50e9c81f64ee0a47df8637e020b25c7a 400 Gene3D G3DSA:3.40.190.10 264 366 1.1E-41 T 11-10-2018 Patl_3891 50e9c81f64ee0a47df8637e020b25c7a 400 Pfam PF03466 LysR substrate binding domain 187 392 2.8E-26 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_3891 50e9c81f64ee0a47df8637e020b25c7a 400 Gene3D G3DSA:3.40.190.10 191 380 1.1E-41 T 11-10-2018 Patl_3891 50e9c81f64ee0a47df8637e020b25c7a 400 Gene3D G3DSA:1.10.10.10 99 187 5.1E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3891 50e9c81f64ee0a47df8637e020b25c7a 400 SUPERFAMILY SSF46785 100 207 3.21E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0253 3dc24d5d9bdf7262dd614c23de0afa0b 157 Pfam PF03061 Thioesterase superfamily 59 145 1.1E-15 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Patl_0253 3dc24d5d9bdf7262dd614c23de0afa0b 157 Gene3D G3DSA:3.10.129.10 2 157 2.0E-53 T 11-10-2018 Patl_0253 3dc24d5d9bdf7262dd614c23de0afa0b 157 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 155 1.0E-20 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 Patl_0253 3dc24d5d9bdf7262dd614c23de0afa0b 157 SUPERFAMILY SSF54637 1 156 6.98E-28 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_2039 de953793246c6b418c7a0996e9eeae51 293 Gene3D G3DSA:3.40.50.150 1 293 1.9E-103 T 11-10-2018 Patl_2039 de953793246c6b418c7a0996e9eeae51 293 SUPERFAMILY SSF53335 9 291 4.9E-77 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_2039 de953793246c6b418c7a0996e9eeae51 293 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 278 38.425 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 Patl_2039 de953793246c6b418c7a0996e9eeae51 293 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 290 6.1E-63 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 Patl_0443 1208b0f517577db136e5b8a879f9e133 378 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 209 366 3.3E-47 T 11-10-2018 IPR000160 GGDEF domain Patl_0443 1208b0f517577db136e5b8a879f9e133 378 SMART SM00267 200 368 6.5E-57 T 11-10-2018 IPR000160 GGDEF domain Patl_0443 1208b0f517577db136e5b8a879f9e133 378 Pfam PF00990 Diguanylate cyclase, GGDEF domain 211 364 1.7E-44 T 11-10-2018 IPR000160 GGDEF domain Patl_0443 1208b0f517577db136e5b8a879f9e133 378 Gene3D G3DSA:3.30.70.270 196 370 2.5E-53 T 11-10-2018 Patl_0443 1208b0f517577db136e5b8a879f9e133 378 SUPERFAMILY SSF55073 216 368 4.94E-44 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_2448 510574aa7ba64dd6a797d67fff691557 190 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 70 3.6E-17 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Patl_2448 510574aa7ba64dd6a797d67fff691557 190 Gene3D G3DSA:1.20.120.1760 2 182 6.4E-17 T 11-10-2018 Patl_2448 510574aa7ba64dd6a797d67fff691557 190 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 184 5.6E-51 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Patl_2448 510574aa7ba64dd6a797d67fff691557 190 PIRSF PIRSF000847 1 190 2.2E-48 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Patl_2448 510574aa7ba64dd6a797d67fff691557 190 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 48 70 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Patl_3810 c2362b023720c272509f2a91af412279 326 SUPERFAMILY SSF53474 2 324 3.0E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3810 c2362b023720c272509f2a91af412279 326 Gene3D G3DSA:3.40.50.1820 1 325 8.2E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3810 c2362b023720c272509f2a91af412279 326 Pfam PF12146 Serine aminopeptidase, S33 44 308 5.4E-58 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 Patl_1949 c2e64b281614d38bf2b21581657265e2 224 SUPERFAMILY SSF53098 18 207 1.37E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_1949 c2e64b281614d38bf2b21581657265e2 224 Pfam PF01609 Transposase DDE domain 109 212 1.4E-7 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Patl_0822 f9513a6c1d46f6fef3457a200c20e6de 118 Gene3D G3DSA:3.30.70.100 4 99 1.5E-6 T 11-10-2018 Patl_0822 f9513a6c1d46f6fef3457a200c20e6de 118 Pfam PF05336 L-rhamnose mutarotase 5 113 2.4E-24 T 11-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 Patl_0822 f9513a6c1d46f6fef3457a200c20e6de 118 SUPERFAMILY SSF54909 4 113 2.31E-22 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_2474 01aab4db24c05c3be44e40464ca67615 376 SUPERFAMILY SSF47240 3 341 1.33E-110 T 11-10-2018 IPR009078 Ferritin-like superfamily Patl_2474 01aab4db24c05c3be44e40464ca67615 376 Pfam PF00268 Ribonucleotide reductase, small chain 33 332 5.8E-48 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Patl_2474 01aab4db24c05c3be44e40464ca67615 376 Gene3D G3DSA:1.10.620.20 2 340 8.0E-142 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Patl_3213 94a6985ba4d833c020bdcc8976d24d7c 651 Pfam PF04991 LicD family 502 532 7.9E-6 T 11-10-2018 IPR007074 LicD family Patl_1542 9e19990cebb4ba892e4a2a9d143fb523 378 SUPERFAMILY SSF103473 2 374 1.74E-44 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_1542 9e19990cebb4ba892e4a2a9d143fb523 378 Pfam PF12832 MFS_1 like family 1 354 2.4E-70 T 11-10-2018 IPR024989 Major facilitator superfamily associated domain Patl_1542 9e19990cebb4ba892e4a2a9d143fb523 378 Gene3D G3DSA:1.20.1250.20 1 179 2.6E-18 T 11-10-2018 Patl_1542 9e19990cebb4ba892e4a2a9d143fb523 378 PIRSF PIRSF004925 1 377 4.6E-89 T 11-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter Patl_1542 9e19990cebb4ba892e4a2a9d143fb523 378 Gene3D G3DSA:1.20.1250.20 182 376 6.2E-38 T 11-10-2018 Patl_4163 8b3330860fea7047bc379947f2e64307 133 PRINTS PR00502 NUDIX hydrolase family signature 34 48 2.2E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Patl_4163 8b3330860fea7047bc379947f2e64307 133 PRINTS PR00502 NUDIX hydrolase family signature 48 63 2.2E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Patl_4163 8b3330860fea7047bc379947f2e64307 133 Gene3D G3DSA:3.90.79.10 2 127 1.6E-25 T 11-10-2018 Patl_4163 8b3330860fea7047bc379947f2e64307 133 SUPERFAMILY SSF55811 5 112 2.44E-25 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Patl_4163 8b3330860fea7047bc379947f2e64307 133 Pfam PF00293 NUDIX domain 11 113 8.4E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Patl_1595 827950c3612536f11602c7324bce25e5 157 Gene3D G3DSA:3.40.630.30 6 108 7.5E-32 T 11-10-2018 Patl_1595 827950c3612536f11602c7324bce25e5 157 Pfam PF00583 Acetyltransferase (GNAT) family 55 144 7.6E-11 T 11-10-2018 IPR000182 GNAT domain Patl_1595 827950c3612536f11602c7324bce25e5 157 SUPERFAMILY SSF55729 12 144 8.92E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_2055 ed1de894dfadc0b25ff824a9b861aeb8 405 SUPERFAMILY SSF75304 35 401 7.06E-88 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Patl_2055 ed1de894dfadc0b25ff824a9b861aeb8 405 Pfam PF01425 Amidase 296 394 6.7E-12 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Patl_2055 ed1de894dfadc0b25ff824a9b861aeb8 405 Pfam PF01425 Amidase 29 209 2.1E-53 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Patl_2055 ed1de894dfadc0b25ff824a9b861aeb8 405 Gene3D G3DSA:3.90.1300.10 12 404 3.0E-94 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Patl_3680 19dbc0c16e2c1c919543b7de8943edec 282 Pfam PF00043 Glutathione S-transferase, C-terminal domain 180 250 1.8E-10 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal Patl_3680 19dbc0c16e2c1c919543b7de8943edec 282 Gene3D G3DSA:1.20.1050.10 133 249 6.8E-112 T 11-10-2018 Patl_3680 19dbc0c16e2c1c919543b7de8943edec 282 Gene3D G3DSA:3.40.30.10 18 256 6.8E-112 T 11-10-2018 Patl_3680 19dbc0c16e2c1c919543b7de8943edec 282 Pfam PF02798 Glutathione S-transferase, N-terminal domain 65 127 4.2E-7 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Patl_3680 19dbc0c16e2c1c919543b7de8943edec 282 SUPERFAMILY SSF47616 117 259 2.05E-35 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Patl_3680 19dbc0c16e2c1c919543b7de8943edec 282 SUPERFAMILY SSF52833 39 130 4.29E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_0946 723535e7f53c8ac035f181e7818402dd 288 SMART SM00849 14 204 1.2E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_0946 723535e7f53c8ac035f181e7818402dd 288 Pfam PF00753 Metallo-beta-lactamase superfamily 13 199 1.3E-19 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_0946 723535e7f53c8ac035f181e7818402dd 288 Gene3D G3DSA:3.60.15.10 1 286 6.9E-99 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_0946 723535e7f53c8ac035f181e7818402dd 288 SUPERFAMILY SSF56281 10 251 4.59E-43 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_2284 5af35fdb88b37ba4d7188adaafab7ed8 572 Pfam PF02254 TrkA-N domain 424 544 1.0E-12 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Patl_2284 5af35fdb88b37ba4d7188adaafab7ed8 572 Pfam PF00999 Sodium/hydrogen exchanger family 21 386 5.8E-51 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Patl_2284 5af35fdb88b37ba4d7188adaafab7ed8 572 Gene3D G3DSA:1.20.1530.20 12 393 2.9E-70 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Patl_2284 5af35fdb88b37ba4d7188adaafab7ed8 572 Gene3D G3DSA:3.40.50.720 419 567 9.0E-24 T 11-10-2018 Patl_2284 5af35fdb88b37ba4d7188adaafab7ed8 572 SUPERFAMILY SSF51735 423 558 1.39E-15 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3513 0899ae5f8da809ab7b76ea098f63e37e 304 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 299 7.6E-125 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Patl_3513 0899ae5f8da809ab7b76ea098f63e37e 304 SUPERFAMILY SSF54211 134 278 2.81E-50 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_3513 0899ae5f8da809ab7b76ea098f63e37e 304 SUPERFAMILY SSF54211 3 126 1.82E-41 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_3513 0899ae5f8da809ab7b76ea098f63e37e 304 Gene3D G3DSA:3.30.1700.10 129 303 1.2E-64 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Patl_3513 0899ae5f8da809ab7b76ea098f63e37e 304 Gene3D G3DSA:3.30.230.20 1 128 7.3E-52 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Patl_3513 0899ae5f8da809ab7b76ea098f63e37e 304 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 3.1E-107 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Patl_3513 0899ae5f8da809ab7b76ea098f63e37e 304 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 45.16 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 Patl_3588 1642d6d82b3222f4c76e2d0f47321a25 94 Pfam PF14019 Protein of unknown function (DUF4235) 27 85 5.0E-15 T 11-10-2018 IPR025329 Protein of unknown function DUF4235 Patl_0211 5793474eb468dc587751215997840b83 340 Gene3D G3DSA:3.40.1090.10 2 317 1.3E-65 T 11-10-2018 Patl_0211 5793474eb468dc587751215997840b83 340 SUPERFAMILY SSF52151 3 304 1.96E-40 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Patl_0211 5793474eb468dc587751215997840b83 340 Pfam PF01734 Patatin-like phospholipase 6 193 6.7E-19 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Patl_2876 84e7450571c86f768df731920117375b 329 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 35 325 9.0E-34 T 11-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 Patl_2876 84e7450571c86f768df731920117375b 329 SUPERFAMILY SSF51197 14 325 1.19E-71 T 11-10-2018 Patl_2876 84e7450571c86f768df731920117375b 329 Gene3D G3DSA:3.60.130.10 4 327 4.5E-90 T 11-10-2018 Patl_3970 e39177ea3175958a92186636c83b742e 263 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 4 263 52.981 T 11-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 Patl_3970 e39177ea3175958a92186636c83b742e 263 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Patl_3970 e39177ea3175958a92186636c83b742e 263 Gene3D G3DSA:3.40.50.150 2 260 5.9E-56 T 11-10-2018 Patl_3970 e39177ea3175958a92186636c83b742e 263 SUPERFAMILY SSF53335 37 200 8.0E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3970 e39177ea3175958a92186636c83b742e 263 Pfam PF05175 Methyltransferase small domain 41 129 8.5E-13 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Patl_1451 da96bc7de80706aea66fef49d3644582 209 PIRSF PIRSF006324 1 207 1.0E-53 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Patl_1451 da96bc7de80706aea66fef49d3644582 209 Pfam PF01810 LysE type translocator 14 203 1.8E-34 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Patl_0754 9e00e507c6f46a84f20577c5fc8d571b 350 SMART SM00267 172 346 7.3E-65 T 11-10-2018 IPR000160 GGDEF domain Patl_0754 9e00e507c6f46a84f20577c5fc8d571b 350 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 179 345 1.9E-50 T 11-10-2018 IPR000160 GGDEF domain Patl_0754 9e00e507c6f46a84f20577c5fc8d571b 350 Gene3D G3DSA:3.30.70.270 169 345 2.6E-57 T 11-10-2018 Patl_0754 9e00e507c6f46a84f20577c5fc8d571b 350 SUPERFAMILY SSF55073 188 348 8.63E-48 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_0754 9e00e507c6f46a84f20577c5fc8d571b 350 Pfam PF00990 Diguanylate cyclase, GGDEF domain 184 342 5.5E-49 T 11-10-2018 IPR000160 GGDEF domain Patl_1803 14dd947813e5549bd94478ae5038245e 731 Gene3D G3DSA:2.120.10.30 82 273 2.0E-14 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Patl_1803 14dd947813e5549bd94478ae5038245e 731 Gene3D G3DSA:3.40.50.1820 402 710 2.4E-71 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1803 14dd947813e5549bd94478ae5038245e 731 Pfam PF00326 Prolyl oligopeptidase family 483 695 2.6E-41 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Patl_1803 14dd947813e5549bd94478ae5038245e 731 SUPERFAMILY SSF53474 433 695 1.68E-63 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1803 14dd947813e5549bd94478ae5038245e 731 SUPERFAMILY SSF82171 99 244 1.14E-10 T 11-10-2018 Patl_4291 5bde122e9d2b505c8bd0d0782c6ea378 114 SUPERFAMILY SSF46767 4 87 3.53E-22 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Patl_4291 5bde122e9d2b505c8bd0d0782c6ea378 114 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 6 87 3.4E-21 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Patl_4291 5bde122e9d2b505c8bd0d0782c6ea378 114 Gene3D G3DSA:1.10.10.10 2 110 2.8E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1650 b690b80061ea2896d52bc8031e9a6a59 198 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 23 195 38.112 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Patl_1650 b690b80061ea2896d52bc8031e9a6a59 198 Pfam PF01583 Adenylylsulphate kinase 24 176 9.7E-73 T 11-10-2018 Patl_1650 b690b80061ea2896d52bc8031e9a6a59 198 Gene3D G3DSA:3.40.50.300 1 198 1.9E-83 T 11-10-2018 Patl_1650 b690b80061ea2896d52bc8031e9a6a59 198 SUPERFAMILY SSF52540 20 194 9.38E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1650 b690b80061ea2896d52bc8031e9a6a59 198 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 7 190 1.0E-78 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 Patl_2583 26022c8dab20e15323637dc617eb0b5d 432 SUPERFAMILY SSF56935 36 430 2.75E-23 T 11-10-2018 Patl_2035 3d773f7e4155b300339fa9626ff06081 264 Pfam PF09955 Predicted integral membrane protein (DUF2189) 77 191 8.8E-26 T 11-10-2018 IPR018692 Predicted integral membrane protein DUF2189 Patl_0775 81ae3312fabc2e6f5bd872596a27442b 333 Pfam PF07589 PEP-CTERM motif 311 332 9.5E-7 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Patl_0775 81ae3312fabc2e6f5bd872596a27442b 333 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 311 333 1.7E-4 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Patl_0775 81ae3312fabc2e6f5bd872596a27442b 333 TIGRFAM TIGR03382 GC_trans_RRR: Myxococcales GC_trans_RRR domain 310 332 0.0023 T 11-10-2018 IPR017756 Transmembrane Gly-Cys-Arg, conserved site Patl_1215 788446adc9fae36df19fccc09163b027 533 Pfam PF00463 Isocitrate lyase family 316 389 1.4E-10 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Patl_1215 788446adc9fae36df19fccc09163b027 533 Pfam PF00463 Isocitrate lyase family 98 268 1.1E-22 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Patl_1215 788446adc9fae36df19fccc09163b027 533 Pfam PF00463 Isocitrate lyase family 428 529 2.9E-12 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Patl_1215 788446adc9fae36df19fccc09163b027 533 SUPERFAMILY SSF51621 9 514 1.03E-125 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Patl_1215 788446adc9fae36df19fccc09163b027 533 PIRSF PIRSF001362 292 411 2.9E-13 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Patl_1215 788446adc9fae36df19fccc09163b027 533 PIRSF PIRSF001362 1 276 6.8E-31 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Patl_1215 788446adc9fae36df19fccc09163b027 533 PIRSF PIRSF001362 412 531 2.5E-6 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 Patl_3414 089fe352e3a711699f8a8e1d1d5a0a99 687 Gene3D G3DSA:2.40.170.20 154 687 2.4E-93 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_3414 089fe352e3a711699f8a8e1d1d5a0a99 687 Gene3D G3DSA:2.170.130.10 46 152 8.8E-39 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_3414 089fe352e3a711699f8a8e1d1d5a0a99 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 146 4.8E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3414 089fe352e3a711699f8a8e1d1d5a0a99 687 Pfam PF00593 TonB dependent receptor 174 685 1.0E-34 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3414 089fe352e3a711699f8a8e1d1d5a0a99 687 SUPERFAMILY SSF56935 40 687 7.51E-95 T 11-10-2018 Patl_1900 97c9d162a62d11d8f2c473f853f186f3 316 Gene3D G3DSA:1.10.10.60 206 315 3.2E-24 T 11-10-2018 Patl_1900 97c9d162a62d11d8f2c473f853f186f3 316 SMART SM00342 227 310 1.7E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_1900 97c9d162a62d11d8f2c473f853f186f3 316 SUPERFAMILY SSF46689 263 310 5.38E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1900 97c9d162a62d11d8f2c473f853f186f3 316 Pfam PF12852 Cupin 2 198 4.8E-26 T 11-10-2018 IPR032783 AraC-type transcription regulator, ligand-binding domain Patl_1900 97c9d162a62d11d8f2c473f853f186f3 316 SUPERFAMILY SSF46689 210 261 2.69E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1900 97c9d162a62d11d8f2c473f853f186f3 316 Pfam PF12833 Helix-turn-helix domain 233 311 2.8E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_0023 3ff2c6527a65f583860f6e64af22581e 169 Gene3D G3DSA:3.90.45.10 1 167 4.3E-64 T 11-10-2018 IPR036821 Peptide deformylase superfamily Patl_0023 3ff2c6527a65f583860f6e64af22581e 169 Pfam PF01327 Polypeptide deformylase 5 152 6.1E-53 T 11-10-2018 IPR023635 Peptide deformylase Patl_0023 3ff2c6527a65f583860f6e64af22581e 169 PIRSF PIRSF004749 1 168 1.9E-56 T 11-10-2018 IPR023635 Peptide deformylase Patl_0023 3ff2c6527a65f583860f6e64af22581e 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 4.9E-58 T 11-10-2018 IPR023635 Peptide deformylase Patl_0023 3ff2c6527a65f583860f6e64af22581e 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.698 T 11-10-2018 IPR023635 Peptide deformylase Patl_0023 3ff2c6527a65f583860f6e64af22581e 169 SUPERFAMILY SSF56420 2 164 2.75E-61 T 11-10-2018 IPR036821 Peptide deformylase superfamily Patl_0023 3ff2c6527a65f583860f6e64af22581e 169 PRINTS PR01576 Peptide deformylase signature 33 62 6.8E-39 T 11-10-2018 IPR023635 Peptide deformylase Patl_0023 3ff2c6527a65f583860f6e64af22581e 169 PRINTS PR01576 Peptide deformylase signature 120 149 6.8E-39 T 11-10-2018 IPR023635 Peptide deformylase Patl_0023 3ff2c6527a65f583860f6e64af22581e 169 PRINTS PR01576 Peptide deformylase signature 89 100 6.8E-39 T 11-10-2018 IPR023635 Peptide deformylase Patl_0023 3ff2c6527a65f583860f6e64af22581e 169 PRINTS PR01576 Peptide deformylase signature 101 119 6.8E-39 T 11-10-2018 IPR023635 Peptide deformylase Patl_1961 464b33edaf525bf3303481b82c7d57fb 260 SUPERFAMILY SSF51197 3 229 2.47E-58 T 11-10-2018 Patl_1961 464b33edaf525bf3303481b82c7d57fb 260 Gene3D G3DSA:2.60.120.620 1 246 2.2E-71 T 11-10-2018 Patl_1961 464b33edaf525bf3303481b82c7d57fb 260 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 14 215 9.9E-38 T 11-10-2018 IPR008775 Phytanoyl-CoA dioxygenase Patl_2900 193e001fb5607c2a7aa44c296556139f 282 SUPERFAMILY SSF51658 29 257 1.53E-10 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily Patl_2900 193e001fb5607c2a7aa44c296556139f 282 Pfam PF05114 Protein of unknown function (DUF692) 8 270 8.3E-100 T 11-10-2018 IPR007801 Uncharacterised protein family UPF0276 Patl_2900 193e001fb5607c2a7aa44c296556139f 282 Gene3D G3DSA:3.20.20.150 5 280 4.2E-82 T 11-10-2018 Patl_4232 1f5f9ae0792f825c99c3c9a4032f411a 852 Pfam PF00246 Zinc carboxypeptidase 61 303 2.1E-18 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Patl_4232 1f5f9ae0792f825c99c3c9a4032f411a 852 SMART SM00631 53 334 0.0015 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 Patl_4232 1f5f9ae0792f825c99c3c9a4032f411a 852 Gene3D G3DSA:3.40.50.880 608 822 2.0E-5 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_4232 1f5f9ae0792f825c99c3c9a4032f411a 852 Gene3D G3DSA:3.40.630.10 55 353 2.5E-33 T 11-10-2018 Patl_4232 1f5f9ae0792f825c99c3c9a4032f411a 852 SUPERFAMILY SSF52317 608 843 7.1E-15 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_4232 1f5f9ae0792f825c99c3c9a4032f411a 852 SUPERFAMILY SSF53187 49 331 3.18E-56 T 11-10-2018 Patl_0633 f9f781140a0bdf6703466014314d569c 234 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 117 219 1.2E-8 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Patl_0633 f9f781140a0bdf6703466014314d569c 234 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 87 7.7E-9 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Patl_0633 f9f781140a0bdf6703466014314d569c 234 SUPERFAMILY SSF53254 1 224 1.22E-31 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Patl_0633 f9f781140a0bdf6703466014314d569c 234 Gene3D G3DSA:3.40.50.1240 1 229 2.3E-30 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Patl_0633 f9f781140a0bdf6703466014314d569c 234 SMART SM00855 3 178 1.1E-6 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Patl_4002 6e827e52c08078334f010ad96ce77705 615 Pfam PF02719 Polysaccharide biosynthesis protein 282 570 3.4E-123 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Patl_4002 6e827e52c08078334f010ad96ce77705 615 Gene3D G3DSA:3.40.50.720 278 606 1.3E-111 T 11-10-2018 Patl_4002 6e827e52c08078334f010ad96ce77705 615 Pfam PF13727 CoA-binding domain 66 237 1.2E-5 T 11-10-2018 Patl_4002 6e827e52c08078334f010ad96ce77705 615 SUPERFAMILY SSF53335 133 343 2.16E-14 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_4002 6e827e52c08078334f010ad96ce77705 615 Gene3D G3DSA:3.40.50.720 141 263 1.5E-28 T 11-10-2018 Patl_4002 6e827e52c08078334f010ad96ce77705 615 SUPERFAMILY SSF51735 280 549 1.07E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2153 2a942d11b806226ab81bf0eafc5dfac9 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 16 224 5.0E-70 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 Patl_2153 2a942d11b806226ab81bf0eafc5dfac9 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 221 4.5E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Patl_2153 2a942d11b806226ab81bf0eafc5dfac9 230 SUPERFAMILY SSF161098 5 220 4.71E-50 T 11-10-2018 IPR035906 MetI-like superfamily Patl_2153 2a942d11b806226ab81bf0eafc5dfac9 230 Gene3D G3DSA:1.10.3720.10 1 228 1.7E-55 T 11-10-2018 IPR035906 MetI-like superfamily Patl_1754 e0073fca3d8ac1514c99d6509e74ed20 386 SUPERFAMILY SSF101898 59 350 7.85E-24 T 11-10-2018 Patl_1754 e0073fca3d8ac1514c99d6509e74ed20 386 Pfam PF03022 Major royal jelly protein 119 374 1.2E-15 T 11-10-2018 IPR017996 Major royal jelly protein/protein yellow Patl_1754 e0073fca3d8ac1514c99d6509e74ed20 386 Gene3D G3DSA:2.120.10.30 43 386 1.2E-105 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Patl_3388 0ec27ad995c4a98fce327c88493ffa20 245 Gene3D G3DSA:2.60.40.1190 27 244 3.7E-36 T 11-10-2018 Patl_3388 0ec27ad995c4a98fce327c88493ffa20 245 Pfam PF06452 Carbohydrate family 9 binding domain-like 36 244 7.2E-62 T 11-10-2018 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6717|MetaCyc: PWY-6784 Patl_3388 0ec27ad995c4a98fce327c88493ffa20 245 ProDom PD004647 DEGRADATION HYDROLASE GLYCOSIDASE XYLAN A XYLANASE PRECURSOR SIGNAL REPEAT 14- 33 112 2.0E-7 T 11-10-2018 Patl_3388 0ec27ad995c4a98fce327c88493ffa20 245 SUPERFAMILY SSF49344 27 244 1.06E-38 T 11-10-2018 Patl_1336 6da75cea7d4fc363a5aeb75f4bcfd19f 244 SUPERFAMILY SSF64438 3 242 1.23E-74 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Patl_1336 6da75cea7d4fc363a5aeb75f4bcfd19f 244 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 21 241 3.2E-69 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Patl_1336 6da75cea7d4fc363a5aeb75f4bcfd19f 244 Gene3D G3DSA:3.60.140.10 1 244 9.1E-81 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Patl_1336 6da75cea7d4fc363a5aeb75f4bcfd19f 244 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 27 242 1.0E-53 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Patl_0098 4d8d3da0c63ed6cb7e002715c159e45f 171 Pfam PF01699 Sodium/calcium exchanger protein 2 112 1.5E-18 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Patl_0098 4d8d3da0c63ed6cb7e002715c159e45f 171 Gene3D G3DSA:1.20.58.1130 2 168 1.4E-37 T 11-10-2018 Patl_0098 4d8d3da0c63ed6cb7e002715c159e45f 171 Gene3D G3DSA:1.20.1420.30 3 117 1.4E-37 T 11-10-2018 Patl_1317 0a6c958e4aa7d8016cc9c9f85becd588 162 PIRSF PIRSF006162 6 162 2.5E-50 T 11-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Patl_1317 0a6c958e4aa7d8016cc9c9f85becd588 162 SUPERFAMILY SSF101307 10 157 4.45E-45 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 Patl_1317 0a6c958e4aa7d8016cc9c9f85becd588 162 Pfam PF04608 Phosphatidylglycerophosphatase A 16 155 2.0E-50 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 Patl_2201 761177ff8e7d949895b35d807d18b8ee 123 Pfam PF04241 Protein of unknown function (DUF423) 18 104 1.5E-30 T 11-10-2018 IPR006696 Protein of unknown function DUF423 Patl_1820 292d0a30428eb4460a516e891c27a289 438 Pfam PF14240 YHYH protein 187 291 5.4E-13 T 11-10-2018 IPR025924 YHYH domain Patl_3316 4214796b268081f55ac3c9b30d0ea96b 441 Gene3D G3DSA:1.10.3720.10 215 439 1.3E-33 T 11-10-2018 IPR035906 MetI-like superfamily Patl_3316 4214796b268081f55ac3c9b30d0ea96b 441 Pfam PF11812 Domain of unknown function (DUF3333) 22 167 8.6E-41 T 11-10-2018 IPR024573 Domain of unknown function DUF3333 Patl_3316 4214796b268081f55ac3c9b30d0ea96b 441 SUPERFAMILY SSF161098 200 426 3.14E-36 T 11-10-2018 IPR035906 MetI-like superfamily Patl_3316 4214796b268081f55ac3c9b30d0ea96b 441 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 237 436 2.3E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Patl_3316 4214796b268081f55ac3c9b30d0ea96b 441 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 198 436 2.7E-68 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Patl_0019 fae04e3b36216ccec58f4b419f7f2af6 178 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 10 174 4.0E-50 T 11-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE Patl_3313 d810c7f9e0133dda2bc058a27f0bb423 462 SUPERFAMILY SSF56935 104 455 2.33E-9 T 11-10-2018 Patl_3313 d810c7f9e0133dda2bc058a27f0bb423 462 Gene3D G3DSA:2.40.160.10 80 462 4.3E-67 T 11-10-2018 IPR023614 Porin domain superfamily Patl_3313 d810c7f9e0133dda2bc058a27f0bb423 462 Pfam PF07396 Phosphate-selective porin O and P 109 460 6.1E-46 T 11-10-2018 IPR010870 Phosphate-selective porin O/P Patl_2363 b48a94bac1303cc189d3f849e05079a2 481 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 40 418 1.4E-150 T 11-10-2018 IPR020010 Conserved hypothetical protein CHP03503 Patl_1083 bfdb828087d2d0f759cccea790615f87 484 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 324 463 2.6E-7 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Patl_1083 bfdb828087d2d0f759cccea790615f87 484 Pfam PF13440 Polysaccharide biosynthesis protein 32 320 1.7E-56 T 11-10-2018 Patl_3187 739b2158e7776062662d2061f7fc8bb9 101 Pfam PF11743 Protein of unknown function (DUF3301) 7 96 4.6E-28 T 11-10-2018 IPR021732 Protein of unknown function DUF3301 Patl_0551 6037df9f596151c99929d69539cb044c 368 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 368 54.498 T 11-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 Patl_0551 6037df9f596151c99929d69539cb044c 368 Gene3D G3DSA:3.40.50.300 9 186 3.1E-20 T 11-10-2018 Patl_0551 6037df9f596151c99929d69539cb044c 368 SUPERFAMILY SSF52540 60 189 5.52E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0551 6037df9f596151c99929d69539cb044c 368 Pfam PF03969 AFG1-like ATPase 5 364 2.8E-149 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 Patl_3446 75cad139fa547366e7384147f2f9152b 94 SMART SM00530 34 89 1.2E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_3446 75cad139fa547366e7384147f2f9152b 94 Gene3D G3DSA:1.10.260.40 3 92 4.0E-15 T 11-10-2018 Patl_3446 75cad139fa547366e7384147f2f9152b 94 SUPERFAMILY SSF47413 35 83 7.42E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_3446 75cad139fa547366e7384147f2f9152b 94 Pfam PF01381 Helix-turn-helix 35 79 7.4E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_2953 e6ecec2c4401f3ce423ca1163fe1bc2c 284 Pfam PF11227 Protein of unknown function (DUF3025) 70 283 1.0E-77 T 11-10-2018 IPR021390 Protein of unknown function DUF3025 Patl_1168 11758273682007f80ca0037469054f37 299 Gene3D G3DSA:3.40.50.300 3 298 6.3E-53 T 11-10-2018 Patl_1168 11758273682007f80ca0037469054f37 299 SUPERFAMILY SSF52540 108 285 7.35E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1168 11758273682007f80ca0037469054f37 299 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 103 294 6.4E-34 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 Patl_1168 11758273682007f80ca0037469054f37 299 TIGRFAM TIGR03018 pepcterm_TyrKin: exopolysaccharide/PEP-CTERM locus tyrosine autokinase 71 279 2.0E-76 T 11-10-2018 Patl_1168 11758273682007f80ca0037469054f37 299 Pfam PF13614 AAA domain 108 255 1.0E-14 T 11-10-2018 IPR025669 AAA domain Patl_0536 8747b8a2558fcfb6a4761f9c62bd3fd5 1008 Pfam PF13620 Carboxypeptidase regulatory-like domain 33 112 7.0E-13 T 11-10-2018 Patl_0536 8747b8a2558fcfb6a4761f9c62bd3fd5 1008 SUPERFAMILY SSF56935 116 971 4.4E-57 T 11-10-2018 Patl_0536 8747b8a2558fcfb6a4761f9c62bd3fd5 1008 Pfam PF00593 TonB dependent receptor 377 968 1.6E-4 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0536 8747b8a2558fcfb6a4761f9c62bd3fd5 1008 SUPERFAMILY SSF49452 26 113 3.53E-6 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Patl_2616 391fa7d16e30a68d80b6ddaaa4aa2a14 353 Pfam PF00144 Beta-lactamase 36 335 7.4E-54 T 11-10-2018 IPR001466 Beta-lactamase-related Patl_2616 391fa7d16e30a68d80b6ddaaa4aa2a14 353 Gene3D G3DSA:3.40.710.10 24 348 6.8E-74 T 11-10-2018 Patl_2616 391fa7d16e30a68d80b6ddaaa4aa2a14 353 SUPERFAMILY SSF56601 25 345 2.13E-69 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Patl_0078 00a457dc86b1bce2c5ad6c7ea6666754 239 SUPERFAMILY SSF53335 15 237 7.85E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_0078 00a457dc86b1bce2c5ad6c7ea6666754 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 54 238 6.4E-69 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Patl_0078 00a457dc86b1bce2c5ad6c7ea6666754 239 Pfam PF02390 Putative methyltransferase 64 233 2.7E-62 T 11-10-2018 Patl_0078 00a457dc86b1bce2c5ad6c7ea6666754 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 30.845 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 Patl_0078 00a457dc86b1bce2c5ad6c7ea6666754 239 Gene3D G3DSA:3.40.50.150 30 239 1.3E-72 T 11-10-2018 Patl_2210 e480038ee2111c34a8319175916317f5 497 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 1 483 21.393 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Patl_2210 e480038ee2111c34a8319175916317f5 497 SUPERFAMILY SSF56317 205 477 9.68E-35 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Patl_2210 e480038ee2111c34a8319175916317f5 497 Pfam PF00795 Carbon-nitrogen hydrolase 209 466 8.0E-27 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Patl_2210 e480038ee2111c34a8319175916317f5 497 Gene3D G3DSA:3.60.110.10 201 471 7.1E-9 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Patl_2210 e480038ee2111c34a8319175916317f5 497 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 52 445 6.2E-86 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 Patl_0449 d364e0ebd4d124a9a188de6d83d80514 104 Pfam PF01722 BolA-like protein 11 84 4.8E-31 T 11-10-2018 IPR002634 BolA protein Patl_0449 d364e0ebd4d124a9a188de6d83d80514 104 PIRSF PIRSF003113 1 100 4.2E-37 T 11-10-2018 IPR002634 BolA protein Patl_0449 d364e0ebd4d124a9a188de6d83d80514 104 SUPERFAMILY SSF82657 1 89 2.09E-31 T 11-10-2018 IPR036065 BolA-like superfamily Patl_0449 d364e0ebd4d124a9a188de6d83d80514 104 Gene3D G3DSA:3.30.300.90 1 90 1.5E-35 T 11-10-2018 Patl_2454 ca60eaaf02ef0d2aba1b50ba7ca887ae 104 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 3 104 1.8E-18 T 11-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 Patl_2454 ca60eaaf02ef0d2aba1b50ba7ca887ae 104 Gene3D G3DSA:3.40.1260.10 1 104 3.1E-20 T 11-10-2018 IPR027396 DsrEFH-like Patl_2454 ca60eaaf02ef0d2aba1b50ba7ca887ae 104 Pfam PF04077 DsrH like protein 8 100 2.1E-19 T 11-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 Patl_2454 ca60eaaf02ef0d2aba1b50ba7ca887ae 104 SUPERFAMILY SSF75169 2 104 4.37E-19 T 11-10-2018 IPR027396 DsrEFH-like Patl_1061 4c4ef139d64f8d5a55453603c8c6ce16 469 Pfam PF01618 MotA/TolQ/ExbB proton channel family 330 444 5.8E-30 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Patl_1061 4c4ef139d64f8d5a55453603c8c6ce16 469 PIRSF PIRSF037714 5 468 1.0E-167 T 11-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein Patl_1176 945fc0bcfe4e3936d1a5849201258215 377 Pfam PF13229 Right handed beta helix region 148 333 1.8E-9 T 11-10-2018 IPR039448 Right handed beta helix domain Patl_1176 945fc0bcfe4e3936d1a5849201258215 377 SUPERFAMILY SSF51126 24 350 5.8E-30 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor Patl_1176 945fc0bcfe4e3936d1a5849201258215 377 SMART SM00710 268 295 2300.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Patl_1176 945fc0bcfe4e3936d1a5849201258215 377 SMART SM00710 180 209 1500.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Patl_1176 945fc0bcfe4e3936d1a5849201258215 377 SMART SM00710 296 318 3200.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Patl_1176 945fc0bcfe4e3936d1a5849201258215 377 SMART SM00710 241 262 7.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat Patl_1176 945fc0bcfe4e3936d1a5849201258215 377 Gene3D G3DSA:2.160.20.10 52 367 7.6E-22 T 11-10-2018 IPR012334 Pectin lyase fold Patl_3270 c40f8424dfcc62ff79ad00ed899f0226 468 ProSitePatterns PS01244 Aconitase family signature 2. 398 411 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Patl_3270 c40f8424dfcc62ff79ad00ed899f0226 468 SUPERFAMILY SSF53732 1 464 1.44E-157 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Patl_3270 c40f8424dfcc62ff79ad00ed899f0226 468 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 465 57.774 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Patl_3270 c40f8424dfcc62ff79ad00ed899f0226 468 ProSitePatterns PS00450 Aconitase family signature 1. 338 354 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Patl_3270 c40f8424dfcc62ff79ad00ed899f0226 468 PRINTS PR00415 Aconitase family signature 398 411 2.6E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_3270 c40f8424dfcc62ff79ad00ed899f0226 468 PRINTS PR00415 Aconitase family signature 118 131 2.6E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_3270 c40f8424dfcc62ff79ad00ed899f0226 468 PRINTS PR00415 Aconitase family signature 132 147 2.6E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_3270 c40f8424dfcc62ff79ad00ed899f0226 468 PRINTS PR00415 Aconitase family signature 107 115 2.6E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_3270 c40f8424dfcc62ff79ad00ed899f0226 468 PRINTS PR00415 Aconitase family signature 194 207 2.6E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_3270 c40f8424dfcc62ff79ad00ed899f0226 468 PRINTS PR00415 Aconitase family signature 285 299 2.6E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_3270 c40f8424dfcc62ff79ad00ed899f0226 468 PRINTS PR00415 Aconitase family signature 342 353 2.6E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_3270 c40f8424dfcc62ff79ad00ed899f0226 468 PRINTS PR00415 Aconitase family signature 208 221 2.6E-44 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_3270 c40f8424dfcc62ff79ad00ed899f0226 468 Gene3D G3DSA:3.30.499.20 4 285 4.9E-97 T 11-10-2018 Patl_3270 c40f8424dfcc62ff79ad00ed899f0226 468 Pfam PF00330 Aconitase family (aconitate hydratase) 7 456 6.4E-152 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Patl_3270 c40f8424dfcc62ff79ad00ed899f0226 468 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 1.3E-238 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Patl_3270 c40f8424dfcc62ff79ad00ed899f0226 468 Gene3D G3DSA:3.30.499.10 323 467 5.0E-48 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Patl_0533 83295f25539c644777325bb96e1edc51 207 PRINTS PR00988 Uridine kinase signature 4 21 6.5E-26 T 11-10-2018 Patl_0533 83295f25539c644777325bb96e1edc51 207 PRINTS PR00988 Uridine kinase signature 173 186 6.5E-26 T 11-10-2018 Patl_0533 83295f25539c644777325bb96e1edc51 207 PRINTS PR00988 Uridine kinase signature 36 47 6.5E-26 T 11-10-2018 Patl_0533 83295f25539c644777325bb96e1edc51 207 PRINTS PR00988 Uridine kinase signature 137 147 6.5E-26 T 11-10-2018 Patl_0533 83295f25539c644777325bb96e1edc51 207 PRINTS PR00988 Uridine kinase signature 151 162 6.5E-26 T 11-10-2018 Patl_0533 83295f25539c644777325bb96e1edc51 207 PRINTS PR00988 Uridine kinase signature 81 96 6.5E-26 T 11-10-2018 Patl_0533 83295f25539c644777325bb96e1edc51 207 SUPERFAMILY SSF52540 3 199 3.82E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0533 83295f25539c644777325bb96e1edc51 207 TIGRFAM TIGR00235 udk: uridine kinase 5 205 1.2E-74 T 11-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 Patl_0533 83295f25539c644777325bb96e1edc51 207 Gene3D G3DSA:3.40.50.300 2 207 1.4E-62 T 11-10-2018 Patl_0533 83295f25539c644777325bb96e1edc51 207 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 6 193 3.4E-41 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Patl_1575 603914e4b1a003f6d4a1c9c57030262d 123 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 73 3.5E-27 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Patl_1575 603914e4b1a003f6d4a1c9c57030262d 123 Pfam PF03840 Preprotein translocase SecG subunit 5 72 1.4E-22 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Patl_1575 603914e4b1a003f6d4a1c9c57030262d 123 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 2.8E-40 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Patl_1575 603914e4b1a003f6d4a1c9c57030262d 123 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 2.8E-40 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Patl_1575 603914e4b1a003f6d4a1c9c57030262d 123 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 2.8E-40 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Patl_1575 603914e4b1a003f6d4a1c9c57030262d 123 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 2.8E-40 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Patl_1592 a72f2673dd87b5b936c7750530a6242a 106 PIRSF PIRSF037511 1 106 1.7E-33 T 11-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 Patl_1592 a72f2673dd87b5b936c7750530a6242a 106 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 6 106 1.5E-34 T 11-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 Patl_1592 a72f2673dd87b5b936c7750530a6242a 106 Gene3D G3DSA:3.30.780.10 26 106 1.1E-30 T 11-10-2018 Patl_1592 a72f2673dd87b5b936c7750530a6242a 106 SUPERFAMILY SSF55159 22 102 9.94E-23 T 11-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 Patl_1592 a72f2673dd87b5b936c7750530a6242a 106 Pfam PF01253 Translation initiation factor SUI1 30 99 1.2E-17 T 11-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 Patl_2233 c7a053b9203a27658012bf9c6df7d56d 198 Gene3D G3DSA:3.40.1280.10 31 173 2.5E-18 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Patl_2233 c7a053b9203a27658012bf9c6df7d56d 198 SUPERFAMILY SSF75217 24 167 2.62E-25 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Patl_2233 c7a053b9203a27658012bf9c6df7d56d 198 Pfam PF00588 SpoU rRNA Methylase family 31 161 4.1E-17 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Patl_0772 58613059e88386f5f1eab8ddd29c7373 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 6.6E-136 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Patl_0772 58613059e88386f5f1eab8ddd29c7373 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 415 5.5E-126 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Patl_0772 58613059e88386f5f1eab8ddd29c7373 426 PIRSF PIRSF006066 1 426 2.0E-148 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Patl_1183 160c1d5564b923e7ff210c3f5b8a1660 530 SUPERFAMILY SSF51905 12 527 8.91E-39 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1183 160c1d5564b923e7ff210c3f5b8a1660 530 Gene3D G3DSA:3.50.50.60 406 529 7.9E-15 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1183 160c1d5564b923e7ff210c3f5b8a1660 530 Pfam PF05199 GMC oxidoreductase 392 519 1.8E-24 T 11-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Patl_0664 849486dba5e66906898417cf9c3136c6 491 Gene3D G3DSA:3.30.70.1070 387 488 1.9E-18 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Patl_2159 ec9865b710a7b1b33d27a2fafb42c447 230 Pfam PF12804 MobA-like NTP transferase domain 31 183 3.7E-24 T 11-10-2018 IPR025877 MobA-like NTP transferase Patl_2159 ec9865b710a7b1b33d27a2fafb42c447 230 SUPERFAMILY SSF53448 27 219 1.01E-18 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_2159 ec9865b710a7b1b33d27a2fafb42c447 230 Gene3D G3DSA:3.90.550.10 18 225 2.5E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_0874 f86023b313caa0bb5b638e94c4d51151 519 Gene3D G3DSA:3.40.50.1820 25 518 3.1E-118 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0874 f86023b313caa0bb5b638e94c4d51151 519 SUPERFAMILY SSF53474 32 517 5.16E-96 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0874 f86023b313caa0bb5b638e94c4d51151 519 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 201 216 - T 11-10-2018 IPR019826 Carboxylesterase type B, active site Patl_0874 f86023b313caa0bb5b638e94c4d51151 519 Pfam PF00135 Carboxylesterase family 35 506 1.0E-89 T 11-10-2018 IPR002018 Carboxylesterase, type B Patl_1938 8830f38367a986538978a4e74f7a8b76 971 Gene3D G3DSA:2.170.130.10 43 164 6.8E-11 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_1938 8830f38367a986538978a4e74f7a8b76 971 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 43 970 4.1E-139 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor Patl_1938 8830f38367a986538978a4e74f7a8b76 971 SUPERFAMILY SSF56935 31 970 2.16E-65 T 11-10-2018 Patl_1938 8830f38367a986538978a4e74f7a8b76 971 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 153 9.8E-11 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_4228 bdf2f2e4992205b5ed9b028b93820509 333 Pfam PF12118 SprA-related family 52 235 6.9E-50 T 11-10-2018 IPR021973 SprA-related family Patl_1869 82f5baebafadd5b3a6f2280b25e45a1a 106 SUPERFAMILY SSF54909 4 100 1.23E-10 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_1869 82f5baebafadd5b3a6f2280b25e45a1a 106 Gene3D G3DSA:3.30.70.100 1 105 2.1E-15 T 11-10-2018 Patl_1869 82f5baebafadd5b3a6f2280b25e45a1a 106 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 4 96 2.5E-9 T 11-10-2018 IPR009799 EthD domain Patl_3336 1cc7fa72655d0aea721cc757bdb809d6 362 Gene3D G3DSA:3.40.30.10 1 90 6.2E-7 T 11-10-2018 Patl_3336 1cc7fa72655d0aea721cc757bdb809d6 362 Gene3D G3DSA:1.20.1050.10 91 231 1.0E-10 T 11-10-2018 Patl_3336 1cc7fa72655d0aea721cc757bdb809d6 362 SUPERFAMILY SSF52833 1 103 5.14E-12 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_3336 1cc7fa72655d0aea721cc757bdb809d6 362 Pfam PF00043 Glutathione S-transferase, C-terminal domain 171 232 2.6E-4 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal Patl_3336 1cc7fa72655d0aea721cc757bdb809d6 362 SUPERFAMILY SSF47616 171 244 4.59E-8 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Patl_3336 1cc7fa72655d0aea721cc757bdb809d6 362 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 78 3.0E-10 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Patl_3533 22072dcae2ef8ea0e814877dd1f98888 497 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 6 494 7.1E-211 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Patl_3533 22072dcae2ef8ea0e814877dd1f98888 497 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Patl_3533 22072dcae2ef8ea0e814877dd1f98888 497 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 252 8.1E-76 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Patl_3533 22072dcae2ef8ea0e814877dd1f98888 497 Gene3D G3DSA:3.30.420.40 4 253 1.6E-101 T 11-10-2018 Patl_3533 22072dcae2ef8ea0e814877dd1f98888 497 SUPERFAMILY SSF53067 6 255 3.89E-91 T 11-10-2018 Patl_3533 22072dcae2ef8ea0e814877dd1f98888 497 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 449 1.3E-57 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Patl_3533 22072dcae2ef8ea0e814877dd1f98888 497 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Patl_3533 22072dcae2ef8ea0e814877dd1f98888 497 PIRSF PIRSF000538 4 497 6.5E-170 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Patl_3533 22072dcae2ef8ea0e814877dd1f98888 497 Gene3D G3DSA:3.30.420.40 254 495 1.5E-83 T 11-10-2018 Patl_3533 22072dcae2ef8ea0e814877dd1f98888 497 SUPERFAMILY SSF53067 254 494 1.34E-75 T 11-10-2018 Patl_3533 22072dcae2ef8ea0e814877dd1f98888 497 Hamap MF_00186 Glycerol kinase [glpK]. 4 496 53.505 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Patl_0037 d4a2bb8e4f19661caeee0c5d351ace27 157 Pfam PF01878 EVE domain 6 154 7.6E-57 T 11-10-2018 IPR002740 EVE domain Patl_0037 d4a2bb8e4f19661caeee0c5d351ace27 157 SUPERFAMILY SSF88697 3 154 1.7E-60 T 11-10-2018 IPR015947 PUA-like superfamily Patl_0037 d4a2bb8e4f19661caeee0c5d351ace27 157 Gene3D G3DSA:3.10.590.10 1 157 3.0E-65 T 11-10-2018 Patl_1932 7f1894bee65393a410700a13b92b6ba5 410 Pfam PF01266 FAD dependent oxidoreductase 11 390 2.8E-34 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Patl_1932 7f1894bee65393a410700a13b92b6ba5 410 SUPERFAMILY SSF51905 8 394 5.11E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1932 7f1894bee65393a410700a13b92b6ba5 410 Gene3D G3DSA:3.50.50.60 11 389 2.6E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1932 7f1894bee65393a410700a13b92b6ba5 410 SUPERFAMILY SSF54373 264 353 5.62E-14 T 11-10-2018 Patl_1932 7f1894bee65393a410700a13b92b6ba5 410 Gene3D G3DSA:3.30.9.10 101 354 2.6E-48 T 11-10-2018 Patl_0381 c03cd706222d9359d515e8dc98570be0 301 Pfam PF01614 Bacterial transcriptional regulator 163 283 1.2E-27 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal Patl_0381 c03cd706222d9359d515e8dc98570be0 301 SUPERFAMILY SSF46785 41 112 1.35E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0381 c03cd706222d9359d515e8dc98570be0 301 Gene3D G3DSA:1.10.10.10 34 108 2.3E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0381 c03cd706222d9359d515e8dc98570be0 301 Pfam PF09339 IclR helix-turn-helix domain 42 88 5.7E-10 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Patl_0381 c03cd706222d9359d515e8dc98570be0 301 SUPERFAMILY SSF55781 105 285 1.31E-40 T 11-10-2018 Patl_0381 c03cd706222d9359d515e8dc98570be0 301 SMART SM00346 40 132 9.1E-9 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Patl_0381 c03cd706222d9359d515e8dc98570be0 301 Gene3D G3DSA:3.30.450.40 119 294 2.1E-42 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_3424 c84e3cacb50801e6a5187bfc0259fe28 674 SMART SM00304 345 397 2.4E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_3424 c84e3cacb50801e6a5187bfc0259fe28 674 Gene3D G3DSA:1.10.287.950 344 674 3.3E-75 T 11-10-2018 Patl_3424 c84e3cacb50801e6a5187bfc0259fe28 674 SMART SM00283 412 673 3.3E-65 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_3424 c84e3cacb50801e6a5187bfc0259fe28 674 Pfam PF00672 HAMP domain 345 392 2.4E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_3424 c84e3cacb50801e6a5187bfc0259fe28 674 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 485 639 1.0E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_3424 c84e3cacb50801e6a5187bfc0259fe28 674 SUPERFAMILY SSF58104 365 674 1.01E-74 T 11-10-2018 Patl_1621 46f27d4dacbe70233693c543a5a01c93 297 Gene3D G3DSA:1.10.10.10 3 92 1.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1621 46f27d4dacbe70233693c543a5a01c93 297 Gene3D G3DSA:3.40.190.290 93 296 2.8E-45 T 11-10-2018 Patl_1621 46f27d4dacbe70233693c543a5a01c93 297 SUPERFAMILY SSF53850 92 293 9.77E-40 T 11-10-2018 Patl_1621 46f27d4dacbe70233693c543a5a01c93 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1621 46f27d4dacbe70233693c543a5a01c93 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1621 46f27d4dacbe70233693c543a5a01c93 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1621 46f27d4dacbe70233693c543a5a01c93 297 Pfam PF03466 LysR substrate binding domain 92 292 2.6E-39 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_1621 46f27d4dacbe70233693c543a5a01c93 297 SUPERFAMILY SSF46785 3 112 7.69E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1621 46f27d4dacbe70233693c543a5a01c93 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.7E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1677 d6090d41fc8b1cd7bbcbb032609986da 149 Pfam PF07681 DoxX 19 104 7.9E-24 T 11-10-2018 IPR032808 DoxX family Patl_1814 0a4dca17834a1f7380fadfd7d361dc12 324 SUPERFAMILY SSF50129 1 140 2.36E-42 T 11-10-2018 IPR011032 GroES-like superfamily Patl_1814 0a4dca17834a1f7380fadfd7d361dc12 324 Gene3D G3DSA:3.40.50.720 123 267 4.5E-104 T 11-10-2018 Patl_1814 0a4dca17834a1f7380fadfd7d361dc12 324 SMART SM00829 10 322 2.4E-46 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_1814 0a4dca17834a1f7380fadfd7d361dc12 324 Pfam PF00107 Zinc-binding dehydrogenase 151 280 6.3E-34 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_1814 0a4dca17834a1f7380fadfd7d361dc12 324 Gene3D G3DSA:3.90.180.10 13 318 4.5E-104 T 11-10-2018 Patl_1814 0a4dca17834a1f7380fadfd7d361dc12 324 SUPERFAMILY SSF51735 112 282 1.6E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1814 0a4dca17834a1f7380fadfd7d361dc12 324 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 11-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Patl_1814 0a4dca17834a1f7380fadfd7d361dc12 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 90 2.1E-12 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Patl_3063 f2ee77f7a1eca7490fe1355318aa974a 255 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 255 8.6E-140 T 11-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 Patl_3063 f2ee77f7a1eca7490fe1355318aa974a 255 Gene3D G3DSA:3.90.550.10 1 255 7.6E-68 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3063 f2ee77f7a1eca7490fe1355318aa974a 255 Pfam PF00483 Nucleotidyl transferase 2 210 2.2E-16 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Patl_3063 f2ee77f7a1eca7490fe1355318aa974a 255 SUPERFAMILY SSF53448 1 255 2.17E-64 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_2697 0a0acee1a55eef91d6391a5218cb54cb 387 Gene3D G3DSA:3.10.180.10 245 386 3.3E-11 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2697 0a0acee1a55eef91d6391a5218cb54cb 387 SUPERFAMILY SSF54593 250 385 1.69E-11 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2274 7bae2b091a71a538cc04d2113f5d90c8 369 Pfam PF01070 FMN-dependent dehydrogenase 28 368 1.3E-119 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Patl_2274 7bae2b091a71a538cc04d2113f5d90c8 369 Gene3D G3DSA:3.20.20.70 16 369 1.6E-124 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2274 7bae2b091a71a538cc04d2113f5d90c8 369 SUPERFAMILY SSF51395 18 364 2.63E-89 T 11-10-2018 Patl_2274 7bae2b091a71a538cc04d2113f5d90c8 369 PIRSF PIRSF000138 3 369 5.6E-121 T 11-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Patl_1135 f419c0b91e2beca0b67aedcab6bd8d78 534 Gene3D G3DSA:3.40.50.300 28 272 1.1E-56 T 11-10-2018 Patl_1135 f419c0b91e2beca0b67aedcab6bd8d78 534 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 33 509 7.4E-151 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Patl_1135 f419c0b91e2beca0b67aedcab6bd8d78 534 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 281 467 3.4E-59 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Patl_1135 f419c0b91e2beca0b67aedcab6bd8d78 534 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 517 188.409 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Patl_1135 f419c0b91e2beca0b67aedcab6bd8d78 534 Gene3D G3DSA:3.40.50.880 282 460 1.8E-15 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_1135 f419c0b91e2beca0b67aedcab6bd8d78 534 Pfam PF13500 AAA domain 32 260 1.5E-21 T 11-10-2018 Patl_1135 f419c0b91e2beca0b67aedcab6bd8d78 534 SUPERFAMILY SSF52317 282 476 6.22E-35 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_1135 f419c0b91e2beca0b67aedcab6bd8d78 534 SUPERFAMILY SSF52540 32 265 1.16E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0081 a9502c9f66508c3743bd504c15121949 529 SUPERFAMILY SSF55874 369 518 4.32E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0081 a9502c9f66508c3743bd504c15121949 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 476 6.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0081 a9502c9f66508c3743bd504c15121949 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 6.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0081 a9502c9f66508c3743bd504c15121949 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 462 6.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0081 a9502c9f66508c3743bd504c15121949 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 497 6.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Patl_0081 a9502c9f66508c3743bd504c15121949 529 SMART SM00387 407 520 7.4E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0081 a9502c9f66508c3743bd504c15121949 529 Gene3D G3DSA:1.10.287.130 258 359 6.3E-20 T 11-10-2018 Patl_0081 a9502c9f66508c3743bd504c15121949 529 SUPERFAMILY SSF47384 275 359 3.73E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Patl_0081 a9502c9f66508c3743bd504c15121949 529 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 410 518 2.0E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Patl_0081 a9502c9f66508c3743bd504c15121949 529 SMART SM00388 281 365 0.0023 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_0081 a9502c9f66508c3743bd504c15121949 529 Gene3D G3DSA:1.10.287.130 171 241 4.4E-5 T 11-10-2018 Patl_0081 a9502c9f66508c3743bd504c15121949 529 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 356 2.8E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Patl_0081 a9502c9f66508c3743bd504c15121949 529 SMART SM00304 172 225 1.1E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_0081 a9502c9f66508c3743bd504c15121949 529 Gene3D G3DSA:3.30.565.10 368 528 1.4E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2815 cc6bcb8021a3b7276312cd7c17b43472 304 SUPERFAMILY SSF82282 8 300 4.19E-74 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Patl_2815 cc6bcb8021a3b7276312cd7c17b43472 304 Pfam PF02574 Homocysteine S-methyltransferase 14 297 5.1E-63 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 Patl_2815 cc6bcb8021a3b7276312cd7c17b43472 304 Gene3D G3DSA:3.20.20.330 4 303 4.9E-71 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Patl_2815 cc6bcb8021a3b7276312cd7c17b43472 304 PIRSF PIRSF037505 7 303 3.7E-12 T 11-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 Patl_0308 100e7baabd91da49f6d3f3321e775a94 125 SUPERFAMILY SSF52218 1 85 1.47E-11 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_0308 100e7baabd91da49f6d3f3321e775a94 125 Pfam PF03358 NADPH-dependent FMN reductase 1 57 2.3E-6 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Patl_0308 100e7baabd91da49f6d3f3321e775a94 125 Gene3D G3DSA:3.40.50.360 1 114 3.5E-17 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_3093 dd4b2572f383249dc42b03f905b43c1b 370 PRINTS PR01010 Flagellar P-ring protein signature 38 53 1.9E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Patl_3093 dd4b2572f383249dc42b03f905b43c1b 370 PRINTS PR01010 Flagellar P-ring protein signature 120 138 1.9E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Patl_3093 dd4b2572f383249dc42b03f905b43c1b 370 PRINTS PR01010 Flagellar P-ring protein signature 103 120 1.9E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Patl_3093 dd4b2572f383249dc42b03f905b43c1b 370 PRINTS PR01010 Flagellar P-ring protein signature 23 38 1.9E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Patl_3093 dd4b2572f383249dc42b03f905b43c1b 370 PRINTS PR01010 Flagellar P-ring protein signature 55 70 1.9E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Patl_3093 dd4b2572f383249dc42b03f905b43c1b 370 PRINTS PR01010 Flagellar P-ring protein signature 161 179 1.9E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Patl_3093 dd4b2572f383249dc42b03f905b43c1b 370 PRINTS PR01010 Flagellar P-ring protein signature 81 100 1.9E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Patl_3093 dd4b2572f383249dc42b03f905b43c1b 370 PRINTS PR01010 Flagellar P-ring protein signature 187 205 1.9E-76 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Patl_3093 dd4b2572f383249dc42b03f905b43c1b 370 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 370 37.959 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Patl_3093 dd4b2572f383249dc42b03f905b43c1b 370 Pfam PF02119 Flagellar P-ring protein 23 369 4.9E-133 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 Patl_0166 09cd64978aeaeb90607b7bc4ba792583 310 SUPERFAMILY SSF53067 55 166 1.1E-8 T 11-10-2018 Patl_0166 09cd64978aeaeb90607b7bc4ba792583 310 Gene3D G3DSA:3.30.420.40 174 205 5.4E-10 T 11-10-2018 Patl_0166 09cd64978aeaeb90607b7bc4ba792583 310 Gene3D G3DSA:3.30.1490.300 84 139 5.4E-10 T 11-10-2018 Patl_0166 09cd64978aeaeb90607b7bc4ba792583 310 Gene3D G3DSA:3.30.420.40 48 173 5.4E-10 T 11-10-2018 Patl_3854 f12e3b851e408ff24a4ec1e0afd0678a 167 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 7 139 1.3E-12 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 Patl_3854 f12e3b851e408ff24a4ec1e0afd0678a 167 TIGRFAM TIGR03546 TIGR03546: TIGR03546 family protein 2 154 1.6E-59 T 11-10-2018 IPR019935 Conserved hypothetical protein CHP03546 Patl_0716 f6419074daf3e2278a1c54d2914a2f9f 249 Pfam PF12571 Phage tail-collar fibre protein 4 153 2.9E-37 T 11-10-2018 IPR022225 Phage tail fibre protein Patl_0204 b8a18da07cb3e512e6c0d3d1b0ecb1d0 425 Gene3D G3DSA:1.20.1250.20 200 374 7.5E-17 T 11-10-2018 Patl_0204 b8a18da07cb3e512e6c0d3d1b0ecb1d0 425 Gene3D G3DSA:1.20.1250.20 4 187 3.4E-17 T 11-10-2018 Patl_0204 b8a18da07cb3e512e6c0d3d1b0ecb1d0 425 SUPERFAMILY SSF103473 8 380 8.5E-45 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_0204 b8a18da07cb3e512e6c0d3d1b0ecb1d0 425 Pfam PF07690 Major Facilitator Superfamily 203 371 6.1E-15 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_0204 b8a18da07cb3e512e6c0d3d1b0ecb1d0 425 Pfam PF07690 Major Facilitator Superfamily 11 185 2.0E-14 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_1319 825c59070f673e7862f8281e394a9649 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 44.704 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Patl_1319 825c59070f673e7862f8281e394a9649 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Patl_1319 825c59070f673e7862f8281e394a9649 621 Gene3D G3DSA:3.40.50.920 495 621 8.8E-39 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Patl_1319 825c59070f673e7862f8281e394a9649 621 SMART SM00861 319 483 3.3E-65 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Patl_1319 825c59070f673e7862f8281e394a9649 621 Pfam PF02779 Transketolase, pyrimidine binding domain 320 479 7.7E-37 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Patl_1319 825c59070f673e7862f8281e394a9649 621 SUPERFAMILY SSF52922 492 619 1.13E-29 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Patl_1319 825c59070f673e7862f8281e394a9649 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 2.9E-25 T 11-10-2018 IPR033248 Transketolase, C-terminal domain Patl_1319 825c59070f673e7862f8281e394a9649 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Patl_1319 825c59070f673e7862f8281e394a9649 621 Gene3D G3DSA:3.40.50.970 317 491 2.6E-64 T 11-10-2018 Patl_1319 825c59070f673e7862f8281e394a9649 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 8.6E-119 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Patl_1319 825c59070f673e7862f8281e394a9649 621 SUPERFAMILY SSF52518 318 504 2.95E-55 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Patl_1319 825c59070f673e7862f8281e394a9649 621 SUPERFAMILY SSF52518 8 381 1.79E-72 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold Patl_1319 825c59070f673e7862f8281e394a9649 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 9.8E-286 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Patl_0816 4d0cb5f407dfed38db3ffac691c5504a 414 Gene3D G3DSA:2.120.10.30 186 405 3.7E-15 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Patl_0816 4d0cb5f407dfed38db3ffac691c5504a 414 Gene3D G3DSA:2.120.10.30 83 176 7.4E-7 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Patl_0816 4d0cb5f407dfed38db3ffac691c5504a 414 SUPERFAMILY SSF101898 102 411 8.11E-21 T 11-10-2018 Patl_2758 e840aeabe8dd534dbbade4c9bc77c6f3 195 SUPERFAMILY SSF49384 27 164 9.27E-17 T 11-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Patl_2758 e840aeabe8dd534dbbade4c9bc77c6f3 195 Gene3D G3DSA:2.60.40.680 17 164 3.4E-12 T 11-10-2018 Patl_2758 e840aeabe8dd534dbbade4c9bc77c6f3 195 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 168 189 2.1E-4 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Patl_2835 f6f23829e5843be332e7244c4f20db33 99 SUPERFAMILY SSF54909 1 97 5.72E-29 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_2835 f6f23829e5843be332e7244c4f20db33 99 Gene3D G3DSA:3.30.70.1060 1 98 4.1E-33 T 11-10-2018 Patl_2835 f6f23829e5843be332e7244c4f20db33 99 Pfam PF03795 YCII-related domain 1 93 2.0E-25 T 11-10-2018 IPR005545 YCII-related Patl_4052 82bbd7c5335b35e6690de0ec1cf38626 181 Gene3D G3DSA:1.20.1290.10 13 180 8.5E-36 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Patl_4052 82bbd7c5335b35e6690de0ec1cf38626 181 SUPERFAMILY SSF69118 1 180 6.05E-49 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Patl_3097 cb95eae104d3c0ba722d2a7033769935 458 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 440 2.9E-92 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Patl_3097 cb95eae104d3c0ba722d2a7033769935 458 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 379 457 3.6E-12 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Patl_3097 cb95eae104d3c0ba722d2a7033769935 458 Pfam PF00460 Flagella basal body rod protein 3 33 6.7E-11 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Patl_3097 cb95eae104d3c0ba722d2a7033769935 458 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Patl_3097 cb95eae104d3c0ba722d2a7033769935 458 SUPERFAMILY SSF117143 79 418 3.92E-70 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Patl_3097 cb95eae104d3c0ba722d2a7033769935 458 Gene3D G3DSA:2.60.98.20 157 339 5.0E-18 T 11-10-2018 IPR037058 Flagellar hook protein FlgE superfamily Patl_3097 cb95eae104d3c0ba722d2a7033769935 458 Pfam PF07559 Flagellar basal body protein FlaE 182 338 1.5E-26 T 11-10-2018 IPR011491 Flagellar hook protein FlgE Patl_2000 ab7d6bb0346f8a616a056a95b21d8d59 332 SUPERFAMILY SSF50939 34 290 3.14E-29 T 11-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 Patl_2000 ab7d6bb0346f8a616a056a95b21d8d59 332 Gene3D G3DSA:2.130.10.10 16 300 4.3E-11 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_2000 ab7d6bb0346f8a616a056a95b21d8d59 332 Pfam PF14870 Photosynthesis system II assembly factor YCF48 105 222 3.8E-10 T 11-10-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain Patl_1806 20acab789e313996a0f3f212ad200bfe 465 SUPERFAMILY SSF50952 72 456 6.28E-34 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Patl_1806 20acab789e313996a0f3f212ad200bfe 465 Gene3D G3DSA:2.120.10.30 181 453 1.1E-8 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Patl_1806 20acab789e313996a0f3f212ad200bfe 465 Pfam PF07995 Glucose / Sorbosone dehydrogenase 189 377 1.2E-6 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase Patl_1063 b1e44077a2ffb73c862d5f1dd7a16449 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 2.6E-33 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Patl_1063 b1e44077a2ffb73c862d5f1dd7a16449 135 Gene3D G3DSA:3.30.420.270 62 130 4.1E-11 T 11-10-2018 Patl_3861 9b4a0c7af0b75ba7f9ee932f2f419af7 212 SUPERFAMILY SSF53335 13 208 1.15E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3861 9b4a0c7af0b75ba7f9ee932f2f419af7 212 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 3 212 36.65 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Patl_3861 9b4a0c7af0b75ba7f9ee932f2f419af7 212 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 134 149 - T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Patl_3861 9b4a0c7af0b75ba7f9ee932f2f419af7 212 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 209 3.9E-73 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 Patl_3861 9b4a0c7af0b75ba7f9ee932f2f419af7 212 Gene3D G3DSA:3.40.50.150 2 210 9.3E-70 T 11-10-2018 Patl_3861 9b4a0c7af0b75ba7f9ee932f2f419af7 212 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 9 208 3.1E-64 T 11-10-2018 Patl_0694 5808117a51e8c5049b9206f5ab5274ba 338 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 41 321 6.5E-59 T 11-10-2018 IPR006430 Phage portal protein PBSX family Patl_0282 c6a757538947196d982290c6d475c4d5 559 SUPERFAMILY SSF52540 378 525 7.04E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0282 c6a757538947196d982290c6d475c4d5 559 Gene3D G3DSA:1.20.1560.10 4 327 1.3E-25 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Patl_0282 c6a757538947196d982290c6d475c4d5 559 Gene3D G3DSA:3.40.50.300 354 544 8.6E-12 T 11-10-2018 Patl_0282 c6a757538947196d982290c6d475c4d5 559 Pfam PF00664 ABC transporter transmembrane region 28 293 4.6E-7 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Patl_0282 c6a757538947196d982290c6d475c4d5 559 SUPERFAMILY SSF90123 15 325 1.03E-33 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Patl_3940 22a5f9bacac34c79b25a608c65fcc177 60 Gene3D G3DSA:1.10.1660.10 1 59 3.4E-6 T 11-10-2018 Patl_2734 f5dd12659650045f60d223086744229a 307 SUPERFAMILY SSF88713 18 303 1.97E-54 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Patl_2734 f5dd12659650045f60d223086744229a 307 Gene3D G3DSA:3.20.20.370 21 305 2.8E-57 T 11-10-2018 Patl_2734 f5dd12659650045f60d223086744229a 307 Pfam PF01522 Polysaccharide deacetylase 81 192 3.8E-10 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Patl_1344 a0348e5b98020cc31c620defb2fd685e 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 147 3.7E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1344 a0348e5b98020cc31c620defb2fd685e 687 Pfam PF00593 TonB dependent receptor 236 686 4.9E-31 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1344 a0348e5b98020cc31c620defb2fd685e 687 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 670 687 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site Patl_1344 a0348e5b98020cc31c620defb2fd685e 687 SUPERFAMILY SSF56935 19 687 1.06E-95 T 11-10-2018 Patl_1344 a0348e5b98020cc31c620defb2fd685e 687 Gene3D G3DSA:2.40.170.20 35 687 1.8E-113 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_1031 a95444ed17d21b347bd91b5f515b5b95 117 Pfam PF06877 Regulator of ribonuclease activity B 11 112 9.1E-28 T 11-10-2018 IPR009671 Regulator of ribonuclease activity B domain Patl_1031 a95444ed17d21b347bd91b5f515b5b95 117 SUPERFAMILY SSF89946 4 116 9.42E-37 T 11-10-2018 IPR036701 RraB-like superfamily Patl_1031 a95444ed17d21b347bd91b5f515b5b95 117 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 3 116 27.356 T 11-10-2018 IPR016716 Regulator of ribonuclease activity B Patl_1031 a95444ed17d21b347bd91b5f515b5b95 117 PIRSF PIRSF018193 1 117 4.4E-40 T 11-10-2018 IPR016716 Regulator of ribonuclease activity B Patl_1031 a95444ed17d21b347bd91b5f515b5b95 117 Gene3D G3DSA:3.30.70.970 1 117 1.2E-41 T 11-10-2018 IPR036701 RraB-like superfamily Patl_0454 980fa083bae5874670808ffab49e44bf 253 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 253 33.448 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 Patl_0454 980fa083bae5874670808ffab49e44bf 253 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 7 248 1.5E-79 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 Patl_0454 980fa083bae5874670808ffab49e44bf 253 SMART SM00900 144 240 5.2E-27 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Patl_0454 980fa083bae5874670808ffab49e44bf 253 Pfam PF04205 FMN-binding domain 144 237 3.8E-15 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Patl_0454 980fa083bae5874670808ffab49e44bf 253 PIRSF PIRSF009437 1 251 8.0E-87 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 Patl_2617 87287a8ec8847c1afa241cc37f9e1c6b 289 SUPERFAMILY SSF103481 43 132 1.7E-8 T 11-10-2018 Patl_2617 87287a8ec8847c1afa241cc37f9e1c6b 289 Pfam PF00892 EamA-like transporter family 145 276 1.7E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Patl_2617 87287a8ec8847c1afa241cc37f9e1c6b 289 Pfam PF00892 EamA-like transporter family 13 131 2.0E-6 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Patl_2617 87287a8ec8847c1afa241cc37f9e1c6b 289 SUPERFAMILY SSF103481 183 279 9.94E-12 T 11-10-2018 Patl_2848 e634563e69565df7ffe80da87ee5d658 373 Gene3D G3DSA:3.90.180.10 33 144 2.2E-5 T 11-10-2018 Patl_2848 e634563e69565df7ffe80da87ee5d658 373 Gene3D G3DSA:3.40.50.720 161 244 2.2E-5 T 11-10-2018 Patl_2848 e634563e69565df7ffe80da87ee5d658 373 Pfam PF11017 Protein of unknown function (DUF2855) 50 363 2.9E-99 T 11-10-2018 IPR021276 Protein of unknown function DUF2855 Patl_2276 29f8feb86fb05e23a1172b5211064a3b 336 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 250 328 4.5E-17 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 Patl_2276 29f8feb86fb05e23a1172b5211064a3b 336 Gene3D G3DSA:3.30.1150.10 164 329 5.9E-30 T 11-10-2018 Patl_2276 29f8feb86fb05e23a1172b5211064a3b 336 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 252 328 5.3E-18 T 11-10-2018 IPR006260 TonB/TolA, C-terminal Patl_2276 29f8feb86fb05e23a1172b5211064a3b 336 SUPERFAMILY SSF74653 226 328 1.05E-20 T 11-10-2018 Patl_2667 48f8ae6f535aa78b8b9b52276d89233f 355 SUPERFAMILY SSF143865 17 282 5.23E-69 T 11-10-2018 Patl_2667 48f8ae6f535aa78b8b9b52276d89233f 355 Gene3D G3DSA:3.30.460.20 2 158 5.8E-28 T 11-10-2018 Patl_2667 48f8ae6f535aa78b8b9b52276d89233f 355 Pfam PF01544 CorA-like Mg2+ transporter protein 57 351 6.9E-67 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Patl_2667 48f8ae6f535aa78b8b9b52276d89233f 355 SUPERFAMILY SSF144083 284 352 6.28E-19 T 11-10-2018 Patl_2667 48f8ae6f535aa78b8b9b52276d89233f 355 Gene3D G3DSA:1.20.58.340 272 355 1.2E-30 T 11-10-2018 Patl_2667 48f8ae6f535aa78b8b9b52276d89233f 355 Gene3D G3DSA:1.20.58.340 159 270 2.1E-33 T 11-10-2018 Patl_2667 48f8ae6f535aa78b8b9b52276d89233f 355 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 30 355 2.8E-88 T 11-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 Patl_2572 722cab2e422ee1f4c752fa28dc8d4e57 414 SUPERFAMILY SSF53850 24 360 2.37E-56 T 11-10-2018 Patl_2572 722cab2e422ee1f4c752fa28dc8d4e57 414 Gene3D G3DSA:3.40.190.10 41 354 4.3E-102 T 11-10-2018 Patl_2572 722cab2e422ee1f4c752fa28dc8d4e57 414 Pfam PF01547 Bacterial extracellular solute-binding protein 38 326 9.8E-30 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein Patl_2572 722cab2e422ee1f4c752fa28dc8d4e57 414 Gene3D G3DSA:3.40.190.10 140 391 4.3E-102 T 11-10-2018 Patl_0032 36d181eee4984abe097039e989b90e20 80 SUPERFAMILY SSF160272 2 74 1.31E-12 T 11-10-2018 IPR036692 Shew3726-like superfamily Patl_0317 6ee3dd883bc29527ce7c28deecb1f371 537 SUPERFAMILY SSF52096 46 268 9.37E-50 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_0317 6ee3dd883bc29527ce7c28deecb1f371 537 Pfam PF01039 Carboxyl transferase domain 53 516 1.2E-107 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Patl_0317 6ee3dd883bc29527ce7c28deecb1f371 537 SUPERFAMILY SSF52096 236 516 4.83E-73 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_0317 6ee3dd883bc29527ce7c28deecb1f371 537 Gene3D G3DSA:3.90.226.10 273 537 7.2E-86 T 11-10-2018 Patl_0317 6ee3dd883bc29527ce7c28deecb1f371 537 Gene3D G3DSA:3.90.226.10 1 271 7.6E-62 T 11-10-2018 Patl_2836 cc8aa3116ac4228b25100d51a9112771 137 SUPERFAMILY SSF75620 8 113 3.49E-11 T 11-10-2018 Patl_2836 cc8aa3116ac4228b25100d51a9112771 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Patl_2836 cc8aa3116ac4228b25100d51a9112771 137 Pfam PF00472 RF-1 domain 8 132 3.6E-22 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Patl_2836 cc8aa3116ac4228b25100d51a9112771 137 Gene3D G3DSA:3.30.160.20 1 137 7.6E-39 T 11-10-2018 Patl_2105 dd958ec44b8b1b5b36da541c0e6a8eb9 100 Gene3D G3DSA:1.10.10.10 1 100 5.9E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2105 dd958ec44b8b1b5b36da541c0e6a8eb9 100 SMART SM00418 15 93 5.9E-24 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Patl_2105 dd958ec44b8b1b5b36da541c0e6a8eb9 100 Pfam PF01022 Bacterial regulatory protein, arsR family 23 66 5.2E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Patl_2105 dd958ec44b8b1b5b36da541c0e6a8eb9 100 SUPERFAMILY SSF46785 7 96 2.26E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2105 dd958ec44b8b1b5b36da541c0e6a8eb9 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 5.4E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Patl_2105 dd958ec44b8b1b5b36da541c0e6a8eb9 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 5.4E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Patl_2105 dd958ec44b8b1b5b36da541c0e6a8eb9 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 5.4E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Patl_4088 964e9b3d5ead486c934f5956a02e6905 540 Gene3D G3DSA:2.60.200.40 368 527 1.4E-21 T 11-10-2018 Patl_4088 964e9b3d5ead486c934f5956a02e6905 540 Gene3D G3DSA:3.40.50.10330 236 367 1.6E-26 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Patl_4088 964e9b3d5ead486c934f5956a02e6905 540 SUPERFAMILY SSF111331 240 537 2.13E-50 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Patl_4088 964e9b3d5ead486c934f5956a02e6905 540 SMART SM00195 90 232 1.6E-16 T 11-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 Patl_4088 964e9b3d5ead486c934f5956a02e6905 540 Gene3D G3DSA:3.90.190.10 76 234 8.8E-28 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like Patl_4088 964e9b3d5ead486c934f5956a02e6905 540 Pfam PF00782 Dual specificity phosphatase, catalytic domain 109 229 6.5E-21 T 11-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 Patl_4088 964e9b3d5ead486c934f5956a02e6905 540 SMART SM00046 240 363 3.9E-6 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Patl_4088 964e9b3d5ead486c934f5956a02e6905 540 SMART SM00404 135 232 0.005 T 11-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic Patl_4088 964e9b3d5ead486c934f5956a02e6905 540 SUPERFAMILY SSF52799 84 228 9.25E-30 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like Patl_4088 964e9b3d5ead486c934f5956a02e6905 540 Pfam PF00781 Diacylglycerol kinase catalytic domain 241 365 2.4E-23 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Patl_3246 d39a6c94571300354180ff94bf646de4 338 Gene3D G3DSA:3.40.50.720 4 275 7.7E-145 T 11-10-2018 Patl_3246 d39a6c94571300354180ff94bf646de4 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 336 1.3E-139 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 Patl_3246 d39a6c94571300354180ff94bf646de4 338 PRINTS PR01713 Nucleotide sugar epimerase signature 296 313 3.1E-5 T 11-10-2018 Patl_3246 d39a6c94571300354180ff94bf646de4 338 PRINTS PR01713 Nucleotide sugar epimerase signature 232 247 3.1E-5 T 11-10-2018 Patl_3246 d39a6c94571300354180ff94bf646de4 338 PRINTS PR01713 Nucleotide sugar epimerase signature 257 272 3.1E-5 T 11-10-2018 Patl_3246 d39a6c94571300354180ff94bf646de4 338 Gene3D G3DSA:3.90.25.10 195 330 7.7E-145 T 11-10-2018 Patl_3246 d39a6c94571300354180ff94bf646de4 338 SUPERFAMILY SSF51735 1 337 1.81E-100 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3246 d39a6c94571300354180ff94bf646de4 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 325 5.2E-60 T 11-10-2018 IPR016040 NAD(P)-binding domain Patl_3703 42245786064ef9eed121c3bfb5329577 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 Patl_3703 42245786064ef9eed121c3bfb5329577 142 Gene3D G3DSA:3.90.1180.10 1 142 3.4E-66 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Patl_3703 42245786064ef9eed121c3bfb5329577 142 Pfam PF00572 Ribosomal protein L13 14 138 7.5E-59 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Patl_3703 42245786064ef9eed121c3bfb5329577 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 4.0E-65 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3703 42245786064ef9eed121c3bfb5329577 142 SUPERFAMILY SSF52161 1 140 2.75E-61 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Patl_3703 42245786064ef9eed121c3bfb5329577 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.963 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Patl_3703 42245786064ef9eed121c3bfb5329577 142 PIRSF PIRSF002181 1 142 1.4E-52 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Patl_1235 7b26bff24475abd758a0456d661688e4 241 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 236 4.2E-86 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Patl_1235 7b26bff24475abd758a0456d661688e4 241 Gene3D G3DSA:1.10.8.590 165 241 2.2E-30 T 11-10-2018 Patl_1235 7b26bff24475abd758a0456d661688e4 241 Gene3D G3DSA:3.40.1280.10 1 164 1.1E-63 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Patl_1235 7b26bff24475abd758a0456d661688e4 241 PIRSF PIRSF004808 1 241 1.3E-75 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 Patl_1235 7b26bff24475abd758a0456d661688e4 241 Pfam PF00588 SpoU rRNA Methylase family 5 154 4.5E-33 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Patl_1235 7b26bff24475abd758a0456d661688e4 241 SUPERFAMILY SSF75217 4 169 5.1E-38 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases Patl_1373 6ffa23742ec51d2bcab13de66a737bd6 325 SUPERFAMILY SSF51430 13 323 7.99E-72 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Patl_1373 6ffa23742ec51d2bcab13de66a737bd6 325 Gene3D G3DSA:3.20.20.100 6 325 2.3E-92 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Patl_1373 6ffa23742ec51d2bcab13de66a737bd6 325 Pfam PF00248 Aldo/keto reductase family 18 315 2.1E-57 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain Patl_0255 ab81bca4176549414ad9e61087c4c15a 282 Pfam PF11231 Protein of unknown function (DUF3034) 32 279 3.7E-104 T 11-10-2018 IPR021393 Protein of unknown function DUF3034 Patl_1263 5c67555b4dd84185711e295623a4bed2 197 Hamap MF_00052_B Ribonuclease HII [rnhB]. 4 183 36.079 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 Patl_1263 5c67555b4dd84185711e295623a4bed2 197 Gene3D G3DSA:3.30.420.10 1 194 1.2E-71 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Patl_1263 5c67555b4dd84185711e295623a4bed2 197 Pfam PF01351 Ribonuclease HII 6 182 1.1E-38 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain Patl_1263 5c67555b4dd84185711e295623a4bed2 197 SUPERFAMILY SSF53098 3 185 3.95E-66 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_0744 bea0aaa2119f42bf851ef8aba1ef022a 363 Pfam PF00529 HlyD membrane-fusion protein of T1SS 289 333 6.6E-10 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Patl_0744 bea0aaa2119f42bf851ef8aba1ef022a 363 SUPERFAMILY SSF111369 154 286 4.58E-10 T 11-10-2018 Patl_0744 bea0aaa2119f42bf851ef8aba1ef022a 363 Gene3D G3DSA:2.40.50.100 45 109 3.0E-14 T 11-10-2018 Patl_0744 bea0aaa2119f42bf851ef8aba1ef022a 363 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 288 8.5E-17 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Patl_0744 bea0aaa2119f42bf851ef8aba1ef022a 363 SUPERFAMILY SSF111369 45 139 5.89E-14 T 11-10-2018 Patl_0744 bea0aaa2119f42bf851ef8aba1ef022a 363 Gene3D G3DSA:2.40.30.170 228 348 7.4E-34 T 11-10-2018 Patl_0744 bea0aaa2119f42bf851ef8aba1ef022a 363 Gene3D G3DSA:1.10.287.470 110 179 2.4E-6 T 11-10-2018 Patl_1331 6022c8b1ad03c299ff1fc4f106c64bc4 188 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 175 1.2E-15 T 11-10-2018 IPR003111 Lon, substrate-binding domain Patl_1331 6022c8b1ad03c299ff1fc4f106c64bc4 188 SUPERFAMILY SSF88697 3 187 3.48E-49 T 11-10-2018 IPR015947 PUA-like superfamily Patl_1331 6022c8b1ad03c299ff1fc4f106c64bc4 188 Gene3D G3DSA:2.30.130.40 1 110 1.3E-29 T 11-10-2018 Patl_1331 6022c8b1ad03c299ff1fc4f106c64bc4 188 SMART SM00464 3 185 3.1E-5 T 11-10-2018 IPR003111 Lon, substrate-binding domain Patl_4137 8e8e24660dc7ecfa1e53a10817d73e81 58 Pfam PF07043 Protein of unknown function (DUF1328) 6 43 1.1E-15 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Patl_4137 8e8e24660dc7ecfa1e53a10817d73e81 58 PIRSF PIRSF036466 1 55 8.3E-23 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Patl_4137 8e8e24660dc7ecfa1e53a10817d73e81 58 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 51 20.288 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Patl_2416 19d79af338b88282e0ab605cd1c78166 329 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 137 320 7.3E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Patl_2416 19d79af338b88282e0ab605cd1c78166 329 Gene3D G3DSA:1.10.3720.10 112 319 8.9E-21 T 11-10-2018 IPR035906 MetI-like superfamily Patl_2416 19d79af338b88282e0ab605cd1c78166 329 SUPERFAMILY SSF161098 113 312 5.63E-22 T 11-10-2018 IPR035906 MetI-like superfamily Patl_1156 40cdc1a7dda422b79fd52465b24b6393 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Patl_1156 40cdc1a7dda422b79fd52465b24b6393 409 SUPERFAMILY SSF55021 335 408 3.82E-16 T 11-10-2018 Patl_1156 40cdc1a7dda422b79fd52465b24b6393 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Patl_1156 40cdc1a7dda422b79fd52465b24b6393 409 Gene3D G3DSA:3.30.70.260 328 408 3.1E-31 T 11-10-2018 Patl_1156 40cdc1a7dda422b79fd52465b24b6393 409 Gene3D G3DSA:3.40.50.720 14 312 4.9E-109 T 11-10-2018 Patl_1156 40cdc1a7dda422b79fd52465b24b6393 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 2.1E-51 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Patl_1156 40cdc1a7dda422b79fd52465b24b6393 409 Gene3D G3DSA:3.40.50.720 109 297 4.9E-109 T 11-10-2018 Patl_1156 40cdc1a7dda422b79fd52465b24b6393 409 SUPERFAMILY SSF52283 8 135 7.44E-50 T 11-10-2018 Patl_1156 40cdc1a7dda422b79fd52465b24b6393 409 SUPERFAMILY SSF51735 108 295 2.44E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1156 40cdc1a7dda422b79fd52465b24b6393 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 1.6E-38 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Patl_3255 ed45acfb441429061c3e82777aee1961 222 Pfam PF03379 CcmB protein 6 219 1.0E-77 T 11-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3255 ed45acfb441429061c3e82777aee1961 222 PIRSF PIRSF002764 1 222 3.6E-76 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria Patl_3255 ed45acfb441429061c3e82777aee1961 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 7.2E-78 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria Patl_3255 ed45acfb441429061c3e82777aee1961 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 6.4E-60 T 11-10-2018 Patl_3255 ed45acfb441429061c3e82777aee1961 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 6.4E-60 T 11-10-2018 Patl_3255 ed45acfb441429061c3e82777aee1961 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 6.4E-60 T 11-10-2018 Patl_3255 ed45acfb441429061c3e82777aee1961 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 6.4E-60 T 11-10-2018 Patl_3255 ed45acfb441429061c3e82777aee1961 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 6.4E-60 T 11-10-2018 Patl_3255 ed45acfb441429061c3e82777aee1961 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 6.4E-60 T 11-10-2018 Patl_1108 0790b230e9cff2e24f373541b88298eb 197 SUPERFAMILY SSF48403 37 190 9.17E-35 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Patl_1108 0790b230e9cff2e24f373541b88298eb 197 Gene3D G3DSA:1.25.40.20 29 197 1.1E-38 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Patl_1108 0790b230e9cff2e24f373541b88298eb 197 Pfam PF12796 Ankyrin repeats (3 copies) 45 133 5.1E-13 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain Patl_1108 0790b230e9cff2e24f373541b88298eb 197 SMART SM00248 170 196 3400.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 Patl_1108 0790b230e9cff2e24f373541b88298eb 197 SMART SM00248 70 98 0.14 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 Patl_1108 0790b230e9cff2e24f373541b88298eb 197 SMART SM00248 104 133 0.32 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 Patl_1108 0790b230e9cff2e24f373541b88298eb 197 SMART SM00248 137 166 1.2 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 Patl_1674 690c4c786559a5071892c627dec58bb9 332 SUPERFAMILY SSF50129 1 127 1.53E-34 T 11-10-2018 IPR011032 GroES-like superfamily Patl_1674 690c4c786559a5071892c627dec58bb9 332 Pfam PF00107 Zinc-binding dehydrogenase 159 290 6.7E-25 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Patl_1674 690c4c786559a5071892c627dec58bb9 332 SUPERFAMILY SSF51735 124 298 1.88E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1674 690c4c786559a5071892c627dec58bb9 332 Gene3D G3DSA:3.40.50.720 126 301 5.6E-121 T 11-10-2018 Patl_1674 690c4c786559a5071892c627dec58bb9 332 Gene3D G3DSA:3.90.180.10 21 329 5.6E-121 T 11-10-2018 Patl_1674 690c4c786559a5071892c627dec58bb9 332 Pfam PF16884 N-terminal domain of oxidoreductase 9 114 3.1E-35 T 11-10-2018 Patl_1674 690c4c786559a5071892c627dec58bb9 332 SMART SM00829 16 330 3.6E-8 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Patl_2539 fd52d8d82db00431f362b34d9f4f745a 445 Gene3D G3DSA:3.40.710.10 19 340 2.0E-74 T 11-10-2018 Patl_2539 fd52d8d82db00431f362b34d9f4f745a 445 SUPERFAMILY SSF56601 24 346 8.92E-72 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Patl_2539 fd52d8d82db00431f362b34d9f4f745a 445 Pfam PF00144 Beta-lactamase 40 328 2.3E-50 T 11-10-2018 IPR001466 Beta-lactamase-related Patl_2197 9e620638e2d5d27769e2fbbb0d4a2c60 831 Gene3D G3DSA:3.40.50.2000 491 818 0.0 T 11-10-2018 Patl_2197 9e620638e2d5d27769e2fbbb0d4a2c60 831 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 669 681 - T 11-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Patl_2197 9e620638e2d5d27769e2fbbb0d4a2c60 831 PIRSF PIRSF000460 7 831 1.7E-230 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Patl_2197 9e620638e2d5d27769e2fbbb0d4a2c60 831 Pfam PF00343 Carbohydrate phosphorylase 111 825 0.0 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Patl_2197 9e620638e2d5d27769e2fbbb0d4a2c60 831 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 23 825 0.0 T 11-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 Patl_2197 9e620638e2d5d27769e2fbbb0d4a2c60 831 SUPERFAMILY SSF53756 21 830 0.0 T 11-10-2018 Patl_2197 9e620638e2d5d27769e2fbbb0d4a2c60 831 Gene3D G3DSA:3.40.50.2000 32 825 0.0 T 11-10-2018 Patl_1589 bfd3f1685d3dc6bcb11574bbc5a43b56 222 Pfam PF06912 Protein of unknown function (DUF1275) 13 209 1.1E-30 T 11-10-2018 IPR010699 Protein of unknown function DUF1275 Patl_2555 eff0d68c003e30009c81baa885878375 315 Pfam PF08241 Methyltransferase domain 93 189 2.7E-20 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Patl_2555 eff0d68c003e30009c81baa885878375 315 SUPERFAMILY SSF53335 48 311 1.21E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_2555 eff0d68c003e30009c81baa885878375 315 Gene3D G3DSA:3.40.50.150 36 264 4.0E-31 T 11-10-2018 Patl_1137 8ab58760a69e6d350e2cfb6de50e46b5 184 SUPERFAMILY SSF52540 2 180 3.06E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1137 8ab58760a69e6d350e2cfb6de50e46b5 184 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 179 8.2E-52 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Patl_1137 8ab58760a69e6d350e2cfb6de50e46b5 184 PIRSF PIRSF006135 1 182 2.3E-50 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Patl_1137 8ab58760a69e6d350e2cfb6de50e46b5 184 Gene3D G3DSA:3.40.50.300 2 180 3.5E-51 T 11-10-2018 Patl_1749 58816aab5bd0dec9179e8c9105e20a77 305 SUPERFAMILY SSF52768 2 305 1.01E-96 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily Patl_1749 58816aab5bd0dec9179e8c9105e20a77 305 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 8.4E-18 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Patl_1749 58816aab5bd0dec9179e8c9105e20a77 305 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 8.4E-18 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Patl_1749 58816aab5bd0dec9179e8c9105e20a77 305 PRINTS PR01270 Histone deacetylase superfamily signature 233 243 8.4E-18 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Patl_1749 58816aab5bd0dec9179e8c9105e20a77 305 Gene3D G3DSA:3.40.800.20 1 305 9.5E-110 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Patl_1749 58816aab5bd0dec9179e8c9105e20a77 305 Pfam PF00850 Histone deacetylase domain 20 302 2.5E-78 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Patl_1795 b0aeda7b9782ebbd6a8b2fb92c924f74 124 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 80 93 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1795 b0aeda7b9782ebbd6a8b2fb92c924f74 124 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 3 121 5.1E-41 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1795 b0aeda7b9782ebbd6a8b2fb92c924f74 124 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 118 9.7E-30 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1795 b0aeda7b9782ebbd6a8b2fb92c924f74 124 SUPERFAMILY SSF81343 2 121 1.96E-32 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1795 b0aeda7b9782ebbd6a8b2fb92c924f74 124 PIRSF PIRSF000178 1 124 2.1E-30 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1795 b0aeda7b9782ebbd6a8b2fb92c924f74 124 Gene3D G3DSA:1.20.1300.10 1 124 7.5E-39 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_1795 b0aeda7b9782ebbd6a8b2fb92c924f74 124 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Patl_3264 3276d5c42bdb987846e5a29f0e2de7c5 120 SMART SM00448 5 117 2.9E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3264 3276d5c42bdb987846e5a29f0e2de7c5 120 SUPERFAMILY SSF52172 7 120 2.85E-29 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3264 3276d5c42bdb987846e5a29f0e2de7c5 120 Gene3D G3DSA:3.40.50.2300 2 120 3.1E-29 T 11-10-2018 Patl_3264 3276d5c42bdb987846e5a29f0e2de7c5 120 Pfam PF00072 Response regulator receiver domain 7 115 2.4E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1350 ef1237b784db09773896ad0fc7c7e0a4 84 SUPERFAMILY SSF47413 2 65 2.1E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_1350 ef1237b784db09773896ad0fc7c7e0a4 84 Gene3D G3DSA:1.10.260.40 4 83 4.7E-8 T 11-10-2018 Patl_2500 60e300c9bd56a19189e8ea84953b34de 215 Pfam PF01852 START domain 36 202 5.1E-5 T 11-10-2018 IPR002913 START domain GO:0008289 Patl_2500 60e300c9bd56a19189e8ea84953b34de 215 PIRSF PIRSF039033 7 215 1.3E-68 T 11-10-2018 IPR028347 START domain-containing protein Patl_2500 60e300c9bd56a19189e8ea84953b34de 215 SUPERFAMILY SSF55961 34 208 3.64E-28 T 11-10-2018 Patl_2500 60e300c9bd56a19189e8ea84953b34de 215 Gene3D G3DSA:3.30.530.20 33 214 2.2E-44 T 11-10-2018 IPR023393 START-like domain superfamily Patl_2342 7e0fe4b4a6ae4a79d4b5540785a43017 175 Gene3D G3DSA:2.60.40.680 15 147 6.0E-7 T 11-10-2018 Patl_2342 7e0fe4b4a6ae4a79d4b5540785a43017 175 SUPERFAMILY SSF49384 21 130 1.38E-5 T 11-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Patl_4302 05840c7527220e9a9e06d7b1b67896c8 128 Pfam PF03899 ATP synthase I chain 16 110 2.6E-20 T 11-10-2018 IPR005598 ATP synthase protein I Patl_1080 a412101b21e12552dd46c23835931bc3 215 SUPERFAMILY SSF54001 19 182 2.7E-6 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Patl_1080 a412101b21e12552dd46c23835931bc3 215 Gene3D G3DSA:3.10.620.30 21 212 6.2E-76 T 11-10-2018 Patl_1080 a412101b21e12552dd46c23835931bc3 215 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 64 166 2.4E-14 T 11-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted Patl_1096 8898204c03a45931726db819b76cfd72 614 Pfam PF01757 Acyltransferase family 5 320 3.1E-23 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Patl_3069 b26d59e12852594c40c3260d95221f48 391 SUPERFAMILY SSF54373 264 335 1.77E-19 T 11-10-2018 Patl_3069 b26d59e12852594c40c3260d95221f48 391 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 3 383 2.5E-136 T 11-10-2018 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 Patl_3069 b26d59e12852594c40c3260d95221f48 391 Gene3D G3DSA:3.40.50.720 1 116 2.4E-34 T 11-10-2018 Patl_3069 b26d59e12852594c40c3260d95221f48 391 Pfam PF03275 UDP-galactopyranose mutase 153 368 2.0E-75 T 11-10-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 Patl_3069 b26d59e12852594c40c3260d95221f48 391 SUPERFAMILY SSF51971 3 386 4.0E-46 T 11-10-2018 Patl_3069 b26d59e12852594c40c3260d95221f48 391 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 76 1.2E-16 T 11-10-2018 Patl_3069 b26d59e12852594c40c3260d95221f48 391 Gene3D G3DSA:3.40.50.720 166 285 5.5E-26 T 11-10-2018 Patl_3069 b26d59e12852594c40c3260d95221f48 391 Gene3D G3DSA:3.40.50.720 286 389 1.2E-10 T 11-10-2018 Patl_1809 ab9c4c37978038e147b292bb2f5d5fc3 231 Pfam PF03575 Peptidase family S51 2 199 2.5E-59 T 11-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 Patl_1809 ab9c4c37978038e147b292bb2f5d5fc3 231 Gene3D G3DSA:3.40.50.880 1 217 2.2E-61 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_1809 ab9c4c37978038e147b292bb2f5d5fc3 231 SUPERFAMILY SSF52317 2 211 6.45E-48 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_2288 b106b03c6da9018c89762d8d856e0745 1096 SUPERFAMILY SSF48208 11 431 1.36E-72 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Patl_2288 b106b03c6da9018c89762d8d856e0745 1096 Gene3D G3DSA:1.50.10.10 18 415 6.1E-13 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Patl_2288 b106b03c6da9018c89762d8d856e0745 1096 Pfam PF00723 Glycosyl hydrolases family 15 9 814 2.7E-135 T 11-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 Patl_2577 adffb11b6ee21a59f1b09668c2225257 630 Pfam PF05960 Bacterial protein of unknown function (DUF885) 75 619 3.0E-140 T 11-10-2018 IPR010281 Protein of unknown function DUF885 Patl_1392 aee9efed44b1d7d0ffa8886bdb4e6d5d 521 Pfam PF04293 SpoVR like protein 22 452 1.7E-175 T 11-10-2018 IPR007390 Sporulation stage V, protein R Patl_1151 946e395b5ca067ed5b3a198da30d0d9d 276 SMART SM00850 178 274 4.7E-28 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Patl_1151 946e395b5ca067ed5b3a198da30d0d9d 276 SMART SM00448 4 115 5.5E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1151 946e395b5ca067ed5b3a198da30d0d9d 276 Gene3D G3DSA:2.40.50.40 157 237 1.0E-12 T 11-10-2018 Patl_1151 946e395b5ca067ed5b3a198da30d0d9d 276 Pfam PF00072 Response regulator receiver domain 7 115 8.1E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1151 946e395b5ca067ed5b3a198da30d0d9d 276 SUPERFAMILY SSF52172 6 118 1.14E-29 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1151 946e395b5ca067ed5b3a198da30d0d9d 276 Gene3D G3DSA:3.40.50.2300 3 126 5.9E-31 T 11-10-2018 Patl_1151 946e395b5ca067ed5b3a198da30d0d9d 276 Pfam PF04397 LytTr DNA-binding domain 180 269 1.2E-19 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Patl_2273 f2cf260be953e9bf8794686bf12589b5 227 SUPERFAMILY SSF51197 3 174 9.34E-6 T 11-10-2018 Patl_2273 f2cf260be953e9bf8794686bf12589b5 227 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 83 176 1.2E-14 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 Patl_2273 f2cf260be953e9bf8794686bf12589b5 227 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 227 44.065 T 11-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 Patl_2273 f2cf260be953e9bf8794686bf12589b5 227 SMART SM00702 1 177 6.8E-13 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 Patl_2273 f2cf260be953e9bf8794686bf12589b5 227 Gene3D G3DSA:4.10.860.20 180 226 6.7E-21 T 11-10-2018 Patl_2273 f2cf260be953e9bf8794686bf12589b5 227 Gene3D G3DSA:2.60.120.620 1 178 3.8E-41 T 11-10-2018 Patl_2958 d53cb9c812ca12e407efa0af1cf2224a 290 SUPERFAMILY SSF53850 28 244 1.09E-11 T 11-10-2018 Patl_2679 eec46901f50410209ae6bf84496f6034 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 Patl_2679 eec46901f50410209ae6bf84496f6034 337 Gene3D G3DSA:1.10.260.40 1 59 1.4E-21 T 11-10-2018 Patl_2679 eec46901f50410209ae6bf84496f6034 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.0E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_2679 eec46901f50410209ae6bf84496f6034 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.0E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_2679 eec46901f50410209ae6bf84496f6034 337 Pfam PF13377 Periplasmic binding protein-like domain 168 334 3.5E-27 T 11-10-2018 Patl_2679 eec46901f50410209ae6bf84496f6034 337 Gene3D G3DSA:3.40.50.2300 62 306 9.9E-61 T 11-10-2018 Patl_2679 eec46901f50410209ae6bf84496f6034 337 SUPERFAMILY SSF47413 1 57 3.54E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_2679 eec46901f50410209ae6bf84496f6034 337 SMART SM00354 1 71 1.3E-26 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_2679 eec46901f50410209ae6bf84496f6034 337 Gene3D G3DSA:3.40.50.2300 160 289 9.9E-61 T 11-10-2018 Patl_2679 eec46901f50410209ae6bf84496f6034 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.2E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Patl_2679 eec46901f50410209ae6bf84496f6034 337 SUPERFAMILY SSF53822 61 335 1.86E-64 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Patl_1046 9e2cf542a4bfc032373d61a15ddb6413 266 Pfam PF02673 Bacitracin resistance protein BacA 7 259 1.0E-83 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Patl_1046 9e2cf542a4bfc032373d61a15ddb6413 266 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 257 1.9E-74 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Patl_1046 9e2cf542a4bfc032373d61a15ddb6413 266 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.739 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Patl_3566 d1bbfeb4ded64928f36fb313d422141c 561 Gene3D G3DSA:3.30.70.270 376 554 2.4E-57 T 11-10-2018 Patl_3566 d1bbfeb4ded64928f36fb313d422141c 561 SUPERFAMILY SSF55073 395 556 6.36E-49 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3566 d1bbfeb4ded64928f36fb313d422141c 561 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 386 553 4.2E-50 T 11-10-2018 IPR000160 GGDEF domain Patl_3566 d1bbfeb4ded64928f36fb313d422141c 561 Pfam PF00990 Diguanylate cyclase, GGDEF domain 391 551 3.5E-48 T 11-10-2018 IPR000160 GGDEF domain Patl_3566 d1bbfeb4ded64928f36fb313d422141c 561 SMART SM00267 379 555 1.5E-66 T 11-10-2018 IPR000160 GGDEF domain Patl_0512 f2bfcf589db48259223923d39e7391eb 165 SMART SM00344 10 119 1.8E-31 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Patl_0512 f2bfcf589db48259223923d39e7391eb 165 Pfam PF01037 Lrp/AsnC ligand binding domain 76 149 8.7E-14 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Patl_0512 f2bfcf589db48259223923d39e7391eb 165 Gene3D G3DSA:1.10.10.10 2 63 1.1E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0512 f2bfcf589db48259223923d39e7391eb 165 SUPERFAMILY SSF54909 72 151 1.61E-14 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_0512 f2bfcf589db48259223923d39e7391eb 165 Gene3D G3DSA:3.30.70.920 64 146 2.3E-17 T 11-10-2018 Patl_0512 f2bfcf589db48259223923d39e7391eb 165 SUPERFAMILY SSF46785 10 69 1.67E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0512 f2bfcf589db48259223923d39e7391eb 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 1.1E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_0512 f2bfcf589db48259223923d39e7391eb 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 1.1E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_0512 f2bfcf589db48259223923d39e7391eb 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 1.1E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_0512 f2bfcf589db48259223923d39e7391eb 165 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 57 1.2E-16 T 11-10-2018 Patl_3667 aa836b4e602ae273040f5c26aee20ee0 149 Pfam PF05618 Putative ATP-dependant zinc protease 9 141 1.8E-34 T 11-10-2018 Patl_3667 aa836b4e602ae273040f5c26aee20ee0 149 SUPERFAMILY SSF50630 9 142 3.3E-41 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily Patl_3667 aa836b4e602ae273040f5c26aee20ee0 149 Gene3D G3DSA:2.40.70.10 6 136 2.2E-33 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily Patl_1372 8f12170b2b3130c15c9c3d5becc6e25f 293 Pfam PF03466 LysR substrate binding domain 93 289 3.6E-37 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_1372 8f12170b2b3130c15c9c3d5becc6e25f 293 Gene3D G3DSA:3.40.190.290 95 289 7.1E-55 T 11-10-2018 Patl_1372 8f12170b2b3130c15c9c3d5becc6e25f 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 2.0E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1372 8f12170b2b3130c15c9c3d5becc6e25f 293 SUPERFAMILY SSF46785 7 114 4.22E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1372 8f12170b2b3130c15c9c3d5becc6e25f 293 Gene3D G3DSA:1.10.10.10 5 90 5.6E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1372 8f12170b2b3130c15c9c3d5becc6e25f 293 SUPERFAMILY SSF53850 94 291 2.9E-39 T 11-10-2018 Patl_2952 f744810abe30ddd258439a0578f7847d 235 Pfam PF04893 Yip1 domain 14 225 1.1E-24 T 11-10-2018 IPR006977 Yip1 domain GO:0016020 Patl_3347 b353e6f04861ca4b6398674808e2333b 194 SMART SM00644 29 180 2.7E-55 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Patl_3347 b353e6f04861ca4b6398674808e2333b 194 Gene3D G3DSA:3.40.80.10 15 193 3.7E-58 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Patl_3347 b353e6f04861ca4b6398674808e2333b 194 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 40 180 7.2E-29 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Patl_3347 b353e6f04861ca4b6398674808e2333b 194 SUPERFAMILY SSF55846 16 192 8.64E-65 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Patl_2428 53d29a364d9b40393153e23041a20e80 110 Pfam PF00576 HIUase/Transthyretin family 7 109 1.1E-31 T 11-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Patl_2428 53d29a364d9b40393153e23041a20e80 110 SUPERFAMILY SSF49472 4 110 1.05E-33 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Patl_2428 53d29a364d9b40393153e23041a20e80 110 Gene3D G3DSA:2.60.40.180 1 110 1.0E-35 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Patl_2428 53d29a364d9b40393153e23041a20e80 110 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 6 110 6.6E-34 T 11-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Patl_2428 53d29a364d9b40393153e23041a20e80 110 PRINTS PR00189 Transthyretin signature 6 26 5.6E-6 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Patl_2428 53d29a364d9b40393153e23041a20e80 110 PRINTS PR00189 Transthyretin signature 88 110 5.6E-6 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Patl_2428 53d29a364d9b40393153e23041a20e80 110 ProSitePatterns PS00769 Transthyretin signature 2. 93 105 - T 11-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 Patl_2827 264cbd7f9f469f92817f1e61eae7f5bf 206 Pfam PF01300 Telomere recombination 22 198 3.3E-47 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 Patl_2827 264cbd7f9f469f92817f1e61eae7f5bf 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 1.3E-68 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 Patl_2827 264cbd7f9f469f92817f1e61eae7f5bf 206 SUPERFAMILY SSF55821 1 204 5.49E-65 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Patl_2827 264cbd7f9f469f92817f1e61eae7f5bf 206 Gene3D G3DSA:3.90.870.10 1 206 5.4E-66 T 11-10-2018 Patl_0577 a4ceeea7f51606ac04c7faec51dbf9bd 172 SUPERFAMILY SSF52833 34 170 6.98E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_0577 a4ceeea7f51606ac04c7faec51dbf9bd 172 Pfam PF00578 AhpC/TSA family 35 147 6.0E-23 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_0577 a4ceeea7f51606ac04c7faec51dbf9bd 172 Gene3D G3DSA:3.40.30.10 29 172 1.4E-40 T 11-10-2018 Patl_1044 7aab31b9ee5111cf3a3184ad77abc3bf 119 SMART SM00905 4 114 3.0E-39 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Patl_1044 7aab31b9ee5111cf3a3184ad77abc3bf 119 SUPERFAMILY SSF55620 1 116 6.67E-33 T 11-10-2018 Patl_1044 7aab31b9ee5111cf3a3184ad77abc3bf 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 117 5.8E-33 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Patl_1044 7aab31b9ee5111cf3a3184ad77abc3bf 119 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.5E-31 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Patl_1044 7aab31b9ee5111cf3a3184ad77abc3bf 119 Gene3D G3DSA:3.30.1130.10 1 117 4.5E-38 T 11-10-2018 Patl_1044 7aab31b9ee5111cf3a3184ad77abc3bf 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 113 1.0E-30 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Patl_3031 9d850496b42d1f6897a52a7ff67e39c4 288 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 19 257 1.6E-21 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Patl_3031 9d850496b42d1f6897a52a7ff67e39c4 288 Gene3D G3DSA:3.40.50.300 18 259 1.8E-59 T 11-10-2018 Patl_3031 9d850496b42d1f6897a52a7ff67e39c4 288 PIRSF PIRSF003092 2 282 1.5E-84 T 11-10-2018 IPR025501 ATP binding protein MinD Patl_3031 9d850496b42d1f6897a52a7ff67e39c4 288 SUPERFAMILY SSF52540 19 279 6.41E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1506 782f63b50705257a6fec047d5ebcbbd4 472 SUPERFAMILY SSF53720 6 462 1.3E-108 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Patl_1506 782f63b50705257a6fec047d5ebcbbd4 472 Gene3D G3DSA:3.40.605.10 38 452 7.7E-128 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_1506 782f63b50705257a6fec047d5ebcbbd4 472 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 232 239 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Patl_1506 782f63b50705257a6fec047d5ebcbbd4 472 Gene3D G3DSA:3.40.309.10 236 426 7.7E-128 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Patl_1506 782f63b50705257a6fec047d5ebcbbd4 472 Pfam PF00171 Aldehyde dehydrogenase family 6 459 2.0E-104 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Patl_0768 cc9db016c7db279aabceacf17f818e78 663 Gene3D G3DSA:1.25.40.10 153 417 6.3E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0768 cc9db016c7db279aabceacf17f818e78 663 Pfam PF13181 Tetratricopeptide repeat 84 116 0.15 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0768 cc9db016c7db279aabceacf17f818e78 663 Gene3D G3DSA:1.25.40.10 16 152 1.2E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0768 cc9db016c7db279aabceacf17f818e78 663 Pfam PF13469 Sulfotransferase family 427 612 4.9E-42 T 11-10-2018 Patl_0768 cc9db016c7db279aabceacf17f818e78 663 SUPERFAMILY SSF48452 23 379 1.32E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0768 cc9db016c7db279aabceacf17f818e78 663 SMART SM00028 252 285 170.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0768 cc9db016c7db279aabceacf17f818e78 663 SMART SM00028 84 117 0.026 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0768 cc9db016c7db279aabceacf17f818e78 663 SMART SM00028 50 83 190.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0768 cc9db016c7db279aabceacf17f818e78 663 SMART SM00028 184 217 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0768 cc9db016c7db279aabceacf17f818e78 663 SMART SM00028 357 390 160.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0768 cc9db016c7db279aabceacf17f818e78 663 SMART SM00028 286 319 0.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0768 cc9db016c7db279aabceacf17f818e78 663 SUPERFAMILY SSF52540 406 648 3.9E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0768 cc9db016c7db279aabceacf17f818e78 663 Gene3D G3DSA:3.40.50.300 418 661 1.9E-57 T 11-10-2018 Patl_2020 f3b4fe4c2f299ba4db8c479f766c51ef 417 Gene3D G3DSA:1.10.443.10 180 394 2.1E-11 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Patl_2020 f3b4fe4c2f299ba4db8c479f766c51ef 417 SUPERFAMILY SSF56349 186 389 3.24E-10 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Patl_1671 ca26cc95104fc05f96f38fd33d77ff03 90 SUPERFAMILY SSF101744 1 81 1.36E-20 T 11-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 Patl_1671 ca26cc95104fc05f96f38fd33d77ff03 90 Gene3D G3DSA:2.30.30.400 1 82 1.7E-15 T 11-10-2018 IPR038626 Rof-like superfamily Patl_1671 ca26cc95104fc05f96f38fd33d77ff03 90 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 79 4.8E-28 T 11-10-2018 IPR009778 Modulator of Rho-dependent transcription termination Patl_0558 838a177c5690eb14c944b61173e29b7c 213 Pfam PF05494 MlaC protein 33 197 3.4E-50 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Patl_0558 838a177c5690eb14c944b61173e29b7c 213 Gene3D G3DSA:3.10.450.710 24 203 3.1E-45 T 11-10-2018 Patl_0558 838a177c5690eb14c944b61173e29b7c 213 PIRSF PIRSF004649 1 210 2.3E-68 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC Patl_2332 0242206cd596feda5e662fb878107eb7 268 Gene3D G3DSA:3.40.225.10 17 266 5.3E-78 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Patl_2332 0242206cd596feda5e662fb878107eb7 268 SMART SM01007 39 219 1.3E-54 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal Patl_2332 0242206cd596feda5e662fb878107eb7 268 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 39 219 7.2E-45 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal Patl_2332 0242206cd596feda5e662fb878107eb7 268 SUPERFAMILY SSF53639 34 239 1.39E-58 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Patl_2237 5479e97a64da42ee7e08fa1adcab3a1e 107 Pfam PF06906 Protein of unknown function (DUF1272) 6 62 3.0E-29 T 11-10-2018 IPR010696 Protein of unknown function DUF1272 Patl_1504 c702824bb3ccbf965a6ab528591fbdd6 127 SUPERFAMILY SSF54909 28 121 4.44E-24 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_1504 c702824bb3ccbf965a6ab528591fbdd6 127 Pfam PF07045 Domain of unknown function (DUF1330) 29 121 5.2E-28 T 11-10-2018 IPR010753 Domain of unknown function DUF1330 Patl_1504 c702824bb3ccbf965a6ab528591fbdd6 127 Gene3D G3DSA:3.30.70.100 26 119 1.7E-27 T 11-10-2018 Patl_1837 4fc6a6e54c871c0a6fa56b9ce1435195 530 Pfam PF02652 L-lactate permease 5 523 1.2E-101 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 Patl_0210 5c49b06f0af88dc404cb62e145e51dc6 292 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 31 264 6.0E-66 T 11-10-2018 IPR022488 Polyphosphate kinase-2-related Patl_0210 5c49b06f0af88dc404cb62e145e51dc6 292 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 7 279 3.5E-119 T 11-10-2018 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 KEGG: 00190+2.7.4.1 Patl_0210 5c49b06f0af88dc404cb62e145e51dc6 292 Gene3D G3DSA:3.40.50.300 4 285 2.1E-108 T 11-10-2018 Patl_0210 5c49b06f0af88dc404cb62e145e51dc6 292 PIRSF PIRSF028756 6 290 2.6E-82 T 11-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 Patl_0210 5c49b06f0af88dc404cb62e145e51dc6 292 SUPERFAMILY SSF52540 62 262 3.48E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4153 c15001fd7a4dfe9d886429ed65328156 152 Pfam PF00072 Response regulator receiver domain 11 132 4.9E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4153 c15001fd7a4dfe9d886429ed65328156 152 SUPERFAMILY SSF52172 6 144 2.28E-34 T 11-10-2018 IPR011006 CheY-like superfamily Patl_4153 c15001fd7a4dfe9d886429ed65328156 152 Gene3D G3DSA:3.40.50.2300 4 152 1.5E-37 T 11-10-2018 Patl_4153 c15001fd7a4dfe9d886429ed65328156 152 SMART SM00448 9 134 2.2E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1660 8f20619862c335c3dc5858938ab929b0 167 Pfam PF14316 Domain of unknown function (DUF4381) 5 149 8.8E-40 T 11-10-2018 IPR025489 Protein of unknown function (DUF4381 Patl_4123 5964126a73a57531b7aec3fe46d6a457 204 SUPERFAMILY SSF46689 9 82 8.21E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_4123 5964126a73a57531b7aec3fe46d6a457 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 3.6E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_4123 5964126a73a57531b7aec3fe46d6a457 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 3.6E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_4123 5964126a73a57531b7aec3fe46d6a457 204 Gene3D G3DSA:1.10.357.10 78 203 8.2E-29 T 11-10-2018 Patl_4123 5964126a73a57531b7aec3fe46d6a457 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 65 4.3E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_4123 5964126a73a57531b7aec3fe46d6a457 204 SUPERFAMILY SSF48498 87 200 4.45E-24 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Patl_4123 5964126a73a57531b7aec3fe46d6a457 204 Gene3D G3DSA:1.10.10.60 7 74 1.5E-27 T 11-10-2018 Patl_4123 5964126a73a57531b7aec3fe46d6a457 204 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Patl_0546 1afcc1aaf0dca39a9ea809cea2882777 559 Gene3D G3DSA:1.10.3080.10 12 426 2.4E-82 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Patl_0546 1afcc1aaf0dca39a9ea809cea2882777 559 Pfam PF00654 Voltage gated chloride channel 72 408 1.7E-71 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Patl_0546 1afcc1aaf0dca39a9ea809cea2882777 559 SUPERFAMILY SSF81340 7 429 1.7E-82 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Patl_0546 1afcc1aaf0dca39a9ea809cea2882777 559 PRINTS PR00762 Chloride channel signature 112 131 4.2E-17 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Patl_0546 1afcc1aaf0dca39a9ea809cea2882777 559 PRINTS PR00762 Chloride channel signature 163 182 4.2E-17 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Patl_0546 1afcc1aaf0dca39a9ea809cea2882777 559 PRINTS PR00762 Chloride channel signature 359 375 4.2E-17 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Patl_0546 1afcc1aaf0dca39a9ea809cea2882777 559 PRINTS PR00762 Chloride channel signature 328 348 4.2E-17 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Patl_1102 e08ac2ec4cf6c33493fcedfbd68f8774 800 Pfam PF17148 Domain of unknown function (DUF5117) 85 277 7.9E-35 T 11-10-2018 IPR033413 Domain of unknown function DUF5117 Patl_1102 e08ac2ec4cf6c33493fcedfbd68f8774 800 Pfam PF16313 Met-zincin 404 715 4.3E-68 T 11-10-2018 IPR032534 Domain of unknown function DUF4953 Patl_1102 e08ac2ec4cf6c33493fcedfbd68f8774 800 SUPERFAMILY SSF55486 278 486 4.26E-24 T 11-10-2018 Patl_1325 5f0b371ceb13695e9c8ffac4d12eff71 174 Pfam PF16036 Chalcone isomerase-like 36 171 1.7E-13 T 11-10-2018 IPR016087 Chalcone isomerase GO:0016872 Patl_2538 d623743a5434f3363e2a4bb27d13d0d3 454 PIRSF PIRSF006603 4 452 8.0E-57 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Patl_2538 d623743a5434f3363e2a4bb27d13d0d3 454 TIGRFAM TIGR00797 matE: MATE efflux family protein 16 420 1.9E-92 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Patl_2538 d623743a5434f3363e2a4bb27d13d0d3 454 Pfam PF01554 MatE 242 401 5.5E-32 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Patl_2538 d623743a5434f3363e2a4bb27d13d0d3 454 Pfam PF01554 MatE 16 175 4.6E-33 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Patl_1047 3c43343be7dc53b9519022cdf180a5d0 121 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 11-10-2018 IPR019808 Histidine triad, conserved site Patl_1047 3c43343be7dc53b9519022cdf180a5d0 121 Pfam PF01230 HIT domain 12 107 4.1E-26 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Patl_1047 3c43343be7dc53b9519022cdf180a5d0 121 PRINTS PR00332 Histidine triad family signature 5 21 3.9E-21 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Patl_1047 3c43343be7dc53b9519022cdf180a5d0 121 PRINTS PR00332 Histidine triad family signature 26 44 3.9E-21 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Patl_1047 3c43343be7dc53b9519022cdf180a5d0 121 PRINTS PR00332 Histidine triad family signature 94 104 3.9E-21 T 11-10-2018 IPR001310 Histidine triad (HIT) protein Patl_1047 3c43343be7dc53b9519022cdf180a5d0 121 Gene3D G3DSA:3.30.428.10 1 114 4.3E-37 T 11-10-2018 IPR036265 HIT-like superfamily Patl_1047 3c43343be7dc53b9519022cdf180a5d0 121 SUPERFAMILY SSF54197 1 113 9.43E-37 T 11-10-2018 IPR036265 HIT-like superfamily Patl_1521 390a18efc17e177a34360f1ede42ac29 336 Pfam PF04773 FecR protein 118 209 4.6E-24 T 11-10-2018 IPR006860 FecR protein Patl_1521 390a18efc17e177a34360f1ede42ac29 336 Gene3D G3DSA:2.60.120.1440 109 256 1.7E-28 T 11-10-2018 Patl_1521 390a18efc17e177a34360f1ede42ac29 336 Gene3D G3DSA:3.55.50.30 260 335 9.9E-9 T 11-10-2018 Patl_1521 390a18efc17e177a34360f1ede42ac29 336 PIRSF PIRSF018266 1 336 2.3E-76 T 11-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component Patl_1521 390a18efc17e177a34360f1ede42ac29 336 Pfam PF16220 Domain of unknown function (DUF4880) 12 52 7.4E-10 T 11-10-2018 IPR032623 FecR, N-terminal Patl_1521 390a18efc17e177a34360f1ede42ac29 336 Pfam PF16344 Domain of unknown function (DUF4974) 247 320 2.1E-8 T 11-10-2018 IPR032508 Protein FecR, C-terminal Patl_1567 b38ad870a0c5ed5bfef8c904b8e2e575 795 Gene3D G3DSA:3.40.50.300 235 452 1.7E-54 T 11-10-2018 Patl_1567 b38ad870a0c5ed5bfef8c904b8e2e575 795 Gene3D G3DSA:3.40.50.300 9 179 1.3E-25 T 11-10-2018 Patl_1567 b38ad870a0c5ed5bfef8c904b8e2e575 795 SUPERFAMILY SSF54211 566 757 3.34E-36 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Patl_1567 b38ad870a0c5ed5bfef8c904b8e2e575 795 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 650 756 1.2E-12 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Patl_1567 b38ad870a0c5ed5bfef8c904b8e2e575 795 Pfam PF13654 AAA domain 33 540 6.8E-169 T 11-10-2018 Patl_1567 b38ad870a0c5ed5bfef8c904b8e2e575 795 Gene3D G3DSA:3.30.230.10 543 778 3.1E-92 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Patl_1567 b38ad870a0c5ed5bfef8c904b8e2e575 795 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 566 582 4.9E-11 T 11-10-2018 Patl_1567 b38ad870a0c5ed5bfef8c904b8e2e575 795 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 677 696 4.9E-11 T 11-10-2018 Patl_1567 b38ad870a0c5ed5bfef8c904b8e2e575 795 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 647 666 4.9E-11 T 11-10-2018 Patl_1567 b38ad870a0c5ed5bfef8c904b8e2e575 795 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 707 725 4.9E-11 T 11-10-2018 Patl_3029 d1e9fa892a4c912332cfca8efc6d50f6 127 Gene3D G3DSA:3.40.50.2300 1 126 5.6E-41 T 11-10-2018 Patl_3029 d1e9fa892a4c912332cfca8efc6d50f6 127 Pfam PF00072 Response regulator receiver domain 7 119 1.2E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3029 d1e9fa892a4c912332cfca8efc6d50f6 127 SUPERFAMILY SSF52172 3 125 2.85E-38 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3029 d1e9fa892a4c912332cfca8efc6d50f6 127 SMART SM00448 5 119 1.8E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3784 e1a8d4c6188a3d9d887872ea58d5ef83 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 11-10-2018 IPR019844 Cold-shock conserved site Patl_3784 e1a8d4c6188a3d9d887872ea58d5ef83 69 SUPERFAMILY SSF50249 3 68 9.55E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_3784 e1a8d4c6188a3d9d887872ea58d5ef83 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 1.1E-28 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_3784 e1a8d4c6188a3d9d887872ea58d5ef83 69 SMART SM00357 6 69 5.9E-29 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Patl_3784 e1a8d4c6188a3d9d887872ea58d5ef83 69 PRINTS PR00050 Cold shock protein signature 7 22 1.7E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_3784 e1a8d4c6188a3d9d887872ea58d5ef83 69 PRINTS PR00050 Cold shock protein signature 27 36 1.7E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_3784 e1a8d4c6188a3d9d887872ea58d5ef83 69 PRINTS PR00050 Cold shock protein signature 42 60 1.7E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_3784 e1a8d4c6188a3d9d887872ea58d5ef83 69 PIRSF PIRSF002599 1 69 1.1E-23 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 Patl_3784 e1a8d4c6188a3d9d887872ea58d5ef83 69 Gene3D G3DSA:2.40.50.140 5 67 9.0E-29 T 11-10-2018 Patl_1188 5532652257ec5ebba1c42248dbb585b2 360 Pfam PF13692 Glycosyl transferases group 1 191 320 3.6E-10 T 11-10-2018 Patl_1188 5532652257ec5ebba1c42248dbb585b2 360 Gene3D G3DSA:3.40.50.2000 94 359 2.1E-27 T 11-10-2018 Patl_1188 5532652257ec5ebba1c42248dbb585b2 360 SUPERFAMILY SSF53756 21 354 5.76E-31 T 11-10-2018 Patl_1188 5532652257ec5ebba1c42248dbb585b2 360 Gene3D G3DSA:3.40.50.2000 164 343 2.1E-27 T 11-10-2018 Patl_1401 a5af7f223f536ede9378a186c8e7b76f 329 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 319 2.4E-58 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Patl_1401 a5af7f223f536ede9378a186c8e7b76f 329 Gene3D G3DSA:3.20.20.190 21 325 4.2E-106 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Patl_1401 a5af7f223f536ede9378a186c8e7b76f 329 SUPERFAMILY SSF51695 23 324 2.88E-75 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Patl_1980 ca035eee0b1c3f610cc1fec72e955e02 774 Pfam PF00593 TonB dependent receptor 253 773 7.0E-46 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1980 ca035eee0b1c3f610cc1fec72e955e02 774 SUPERFAMILY SSF56935 33 774 9.77E-115 T 11-10-2018 Patl_1980 ca035eee0b1c3f610cc1fec72e955e02 774 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 164 1.4E-15 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1980 ca035eee0b1c3f610cc1fec72e955e02 774 Gene3D G3DSA:2.40.170.20 46 774 1.2E-142 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_3567 df37557de35c06ee2fb2c556aaa4e226 177 Pfam PF11454 Protein of unknown function (DUF3016) 24 164 4.8E-51 T 11-10-2018 IPR021557 Protein of unknown function DUF3016 Patl_3551 2e73f817e16065dff6992bccc11bc938 199 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 16 192 3.7E-49 T 11-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE Patl_2706 3377a6cd0fda9025394621590c2db7ad 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 136 1.2E-13 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 Patl_2706 3377a6cd0fda9025394621590c2db7ad 145 Pfam PF03061 Thioesterase superfamily 58 131 9.0E-10 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Patl_2706 3377a6cd0fda9025394621590c2db7ad 145 SUPERFAMILY SSF54637 11 141 2.8E-23 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_2706 3377a6cd0fda9025394621590c2db7ad 145 Gene3D G3DSA:3.10.129.10 9 141 1.6E-27 T 11-10-2018 Patl_4207 2a9a41bfb215304d4a6d1a629601a7e7 680 Gene3D G3DSA:1.10.1370.40 14 675 2.8E-267 T 11-10-2018 Patl_4207 2a9a41bfb215304d4a6d1a629601a7e7 680 SUPERFAMILY SSF55486 4 677 2.08E-203 T 11-10-2018 Patl_4207 2a9a41bfb215304d4a6d1a629601a7e7 680 Pfam PF01432 Peptidase family M3 222 677 1.8E-158 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 Patl_4207 2a9a41bfb215304d4a6d1a629601a7e7 680 Gene3D G3DSA:1.10.1370.10 140 610 2.8E-267 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 Patl_2805 c74bad4c939bb67649177cc115525d92 315 Pfam PF00561 alpha/beta hydrolase fold 59 176 6.1E-20 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_2805 c74bad4c939bb67649177cc115525d92 315 SUPERFAMILY SSF53474 23 314 3.0E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2805 c74bad4c939bb67649177cc115525d92 315 Gene3D G3DSA:3.40.50.1820 41 309 1.1E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2805 c74bad4c939bb67649177cc115525d92 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 143 156 3.0E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_2805 c74bad4c939bb67649177cc115525d92 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 129 142 3.0E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_2805 c74bad4c939bb67649177cc115525d92 315 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 98 3.0E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_0911 cb5461e5e705b329b8f20c262a8dfd65 664 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 74 131 6.3E-10 T 11-10-2018 Patl_0911 cb5461e5e705b329b8f20c262a8dfd65 664 Pfam PF07593 ASPIC and UnbV 593 646 5.3E-9 T 11-10-2018 IPR011519 ASPIC/UnbV Patl_0911 cb5461e5e705b329b8f20c262a8dfd65 664 SUPERFAMILY SSF69318 167 296 6.02E-15 T 11-10-2018 Patl_0911 cb5461e5e705b329b8f20c262a8dfd65 664 SUPERFAMILY SSF69318 452 585 1.12E-16 T 11-10-2018 Patl_0911 cb5461e5e705b329b8f20c262a8dfd65 664 SUPERFAMILY SSF69318 61 136 6.28E-13 T 11-10-2018 Patl_0559 aba262b3745e65ec633398acf4b5afd6 154 Pfam PF02470 MlaD protein 39 117 1.0E-20 T 11-10-2018 IPR003399 Mce/MlaD Patl_0559 aba262b3745e65ec633398acf4b5afd6 154 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 151 2.9E-53 T 11-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 Patl_0993 eddafe2dcaef7e28540af1a432b39a19 232 SUPERFAMILY SSF81901 86 203 3.14E-20 T 11-10-2018 Patl_0993 eddafe2dcaef7e28540af1a432b39a19 232 SMART SM00671 94 129 0.14 T 11-10-2018 IPR006597 Sel1-like repeat Patl_0993 eddafe2dcaef7e28540af1a432b39a19 232 SMART SM00671 130 165 1.2E-5 T 11-10-2018 IPR006597 Sel1-like repeat Patl_0993 eddafe2dcaef7e28540af1a432b39a19 232 SMART SM00671 166 201 150.0 T 11-10-2018 IPR006597 Sel1-like repeat Patl_0993 eddafe2dcaef7e28540af1a432b39a19 232 Gene3D G3DSA:1.25.40.10 37 232 2.2E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0993 eddafe2dcaef7e28540af1a432b39a19 232 Pfam PF08238 Sel1 repeat 97 128 0.89 T 11-10-2018 IPR006597 Sel1-like repeat Patl_0993 eddafe2dcaef7e28540af1a432b39a19 232 Pfam PF08238 Sel1 repeat 178 196 61.0 T 11-10-2018 IPR006597 Sel1-like repeat Patl_0993 eddafe2dcaef7e28540af1a432b39a19 232 Pfam PF08238 Sel1 repeat 131 165 0.0059 T 11-10-2018 IPR006597 Sel1-like repeat Patl_0826 8bc5a2c8c438e89ca21965fffcf537b6 627 Gene3D G3DSA:3.40.720.10 51 453 3.9E-78 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_0826 8bc5a2c8c438e89ca21965fffcf537b6 627 SUPERFAMILY SSF49373 515 589 9.02E-13 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Patl_0826 8bc5a2c8c438e89ca21965fffcf537b6 627 SUPERFAMILY SSF53649 55 473 1.96E-76 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_0826 8bc5a2c8c438e89ca21965fffcf537b6 627 Pfam PF00884 Sulfatase 55 395 8.3E-46 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_0826 8bc5a2c8c438e89ca21965fffcf537b6 627 SMART SM00635 518 593 5.2E-4 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 Patl_0826 8bc5a2c8c438e89ca21965fffcf537b6 627 Gene3D G3DSA:2.60.40.1080 515 615 2.1E-13 T 11-10-2018 Patl_0826 8bc5a2c8c438e89ca21965fffcf537b6 627 Pfam PF02368 Bacterial Ig-like domain (group 2) 518 585 3.0E-10 T 11-10-2018 IPR003343 Bacterial Ig-like, group 2 Patl_1246 d453ea5819ed82b1e2fd193017836196 272 Gene3D G3DSA:3.60.21.10 11 248 1.1E-20 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Patl_1246 d453ea5819ed82b1e2fd193017836196 272 Pfam PF00149 Calcineurin-like phosphoesterase 12 212 5.7E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Patl_1246 d453ea5819ed82b1e2fd193017836196 272 SUPERFAMILY SSF56300 12 250 1.82E-30 T 11-10-2018 Patl_1322 b8e242d1ab5fbc71dbe2e8c8c95c02bc 254 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 11-10-2018 IPR000540 Flagellar motor protein MotA, conserved site Patl_1322 b8e242d1ab5fbc71dbe2e8c8c95c02bc 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 98 210 1.0E-23 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Patl_2470 e206433186cc16a241ff24d9ed43890c 897 Gene3D G3DSA:1.10.268.10 369 492 1.5E-230 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Patl_2470 e206433186cc16a241ff24d9ed43890c 897 Gene3D G3DSA:2.120.10.90 534 860 5.5E-125 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Patl_2470 e206433186cc16a241ff24d9ed43890c 897 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 858 0.0 T 11-10-2018 Patl_2470 e206433186cc16a241ff24d9ed43890c 897 SUPERFAMILY SSF56719 30 520 1.44E-182 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Patl_2470 e206433186cc16a241ff24d9ed43890c 897 SUPERFAMILY SSF101904 532 868 6.67E-108 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Patl_2470 e206433186cc16a241ff24d9ed43890c 897 SMART SM00434 11 498 5.9E-294 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Patl_2470 e206433186cc16a241ff24d9ed43890c 897 Gene3D G3DSA:3.90.199.10 33 520 1.5E-230 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Patl_2470 e206433186cc16a241ff24d9ed43890c 897 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 6 860 24.492 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Patl_2470 e206433186cc16a241ff24d9ed43890c 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 707 0.54 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Patl_2470 e206433186cc16a241ff24d9ed43890c 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 763 809 4.5E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Patl_2470 e206433186cc16a241ff24d9ed43890c 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 1.0E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Patl_2470 e206433186cc16a241ff24d9ed43890c 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 730 756 7.6E-6 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Patl_2470 e206433186cc16a241ff24d9ed43890c 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 1.4E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Patl_2470 e206433186cc16a241ff24d9ed43890c 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 812 858 2.1E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Patl_2470 e206433186cc16a241ff24d9ed43890c 897 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 539 584 5.1E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Patl_2470 e206433186cc16a241ff24d9ed43890c 897 Gene3D G3DSA:3.30.1360.40 236 332 1.5E-230 T 11-10-2018 Patl_2470 e206433186cc16a241ff24d9ed43890c 897 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.1E-153 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Patl_2764 ecd6d5ed786b96794b10d317ab6c91ca 221 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 220 37.86 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Patl_2764 ecd6d5ed786b96794b10d317ab6c91ca 221 Gene3D G3DSA:3.20.19.10 1 198 2.2E-61 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Patl_2764 ecd6d5ed786b96794b10d317ab6c91ca 221 SUPERFAMILY SSF52016 1 160 1.39E-47 T 11-10-2018 Patl_2764 ecd6d5ed786b96794b10d317ab6c91ca 221 Pfam PF00694 Aconitase C-terminal domain 1 125 4.6E-31 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Patl_2764 ecd6d5ed786b96794b10d317ab6c91ca 221 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 206 1.8E-56 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Patl_2659 ca10ed76f1acb6e29d8625f8ffb80c92 451 SUPERFAMILY SSF56954 4 418 1.1E-73 T 11-10-2018 Patl_2659 ca10ed76f1acb6e29d8625f8ffb80c92 451 Gene3D G3DSA:1.20.1600.10 25 430 1.2E-79 T 11-10-2018 Patl_2659 ca10ed76f1acb6e29d8625f8ffb80c92 451 Pfam PF02321 Outer membrane efflux protein 29 210 2.5E-22 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Patl_2659 ca10ed76f1acb6e29d8625f8ffb80c92 451 Pfam PF02321 Outer membrane efflux protein 232 411 1.3E-28 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Patl_2659 ca10ed76f1acb6e29d8625f8ffb80c92 451 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 26 424 1.6E-72 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 Patl_3306 1ae2059c2725918e4846c405b6a26132 157 Pfam PF02308 MgtC family 25 147 4.7E-29 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Patl_3306 1ae2059c2725918e4846c405b6a26132 157 PRINTS PR01837 MgtC/SapB protein signature 47 65 5.9E-25 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Patl_3306 1ae2059c2725918e4846c405b6a26132 157 PRINTS PR01837 MgtC/SapB protein signature 103 127 5.9E-25 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Patl_3306 1ae2059c2725918e4846c405b6a26132 157 PRINTS PR01837 MgtC/SapB protein signature 28 47 5.9E-25 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Patl_3306 1ae2059c2725918e4846c405b6a26132 157 PRINTS PR01837 MgtC/SapB protein signature 76 98 5.9E-25 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Patl_3773 b9db8d880c8fdf09a6521351aa26aeb0 245 SUPERFAMILY SSF52540 10 223 1.11E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3773 b9db8d880c8fdf09a6521351aa26aeb0 245 Pfam PF00005 ABC transporter 26 169 9.7E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_3773 b9db8d880c8fdf09a6521351aa26aeb0 245 Gene3D G3DSA:3.40.50.300 2 238 2.3E-62 T 11-10-2018 Patl_3773 b9db8d880c8fdf09a6521351aa26aeb0 245 SMART SM00382 35 216 4.9E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1427 1e84145c966327c1925dfed8beef85b6 467 Gene3D G3DSA:3.20.20.70 144 451 7.5E-148 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_1427 1e84145c966327c1925dfed8beef85b6 467 Gene3D G3DSA:2.30.170.30 4 56 1.5E-22 T 11-10-2018 Patl_1427 1e84145c966327c1925dfed8beef85b6 467 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 14 446 5.0E-221 T 11-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Patl_1427 1e84145c966327c1925dfed8beef85b6 467 PIRSF PIRSF018788 3 461 1.8E-233 T 11-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Patl_1427 1e84145c966327c1925dfed8beef85b6 467 Gene3D G3DSA:1.10.220.70 57 143 1.5E-33 T 11-10-2018 Patl_0212 96f4be6dadb2f7296c883f08f6fa3a1c 414 Gene3D G3DSA:3.40.640.10 48 292 1.1E-109 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_0212 96f4be6dadb2f7296c883f08f6fa3a1c 414 PIRSF PIRSF000524 31 413 5.4E-87 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Patl_0212 96f4be6dadb2f7296c883f08f6fa3a1c 414 Pfam PF00266 Aminotransferase class-V 59 363 2.6E-27 T 11-10-2018 IPR000192 Aminotransferase class V domain Patl_0212 96f4be6dadb2f7296c883f08f6fa3a1c 414 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 214 234 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Patl_0212 96f4be6dadb2f7296c883f08f6fa3a1c 414 Gene3D G3DSA:3.90.1150.10 38 387 1.1E-109 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_0212 96f4be6dadb2f7296c883f08f6fa3a1c 414 SUPERFAMILY SSF53383 37 391 3.3E-77 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_2778 6f9ba06cf6baf10a3226f97ff2f3a9cb 346 PIRSF PIRSF039012 1 324 9.8E-81 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Patl_2778 6f9ba06cf6baf10a3226f97ff2f3a9cb 346 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 47 316 7.1E-60 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 Patl_2778 6f9ba06cf6baf10a3226f97ff2f3a9cb 346 SUPERFAMILY SSF53187 21 318 8.27E-76 T 11-10-2018 Patl_2778 6f9ba06cf6baf10a3226f97ff2f3a9cb 346 Gene3D G3DSA:3.40.630.10 15 319 3.7E-89 T 11-10-2018 Patl_1885 4f589b7c6c56113200ecb87d5a85a914 567 Pfam PF01019 Gamma-glutamyltranspeptidase 56 559 1.8E-163 T 11-10-2018 Patl_1885 4f589b7c6c56113200ecb87d5a85a914 567 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 379 403 - T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 Patl_1885 4f589b7c6c56113200ecb87d5a85a914 567 Gene3D G3DSA:3.60.20.40 381 564 1.5E-63 T 11-10-2018 Patl_1885 4f589b7c6c56113200ecb87d5a85a914 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 250 266 1.6E-74 T 11-10-2018 Patl_1885 4f589b7c6c56113200ecb87d5a85a914 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 63 88 1.6E-74 T 11-10-2018 Patl_1885 4f589b7c6c56113200ecb87d5a85a914 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 153 172 1.6E-74 T 11-10-2018 Patl_1885 4f589b7c6c56113200ecb87d5a85a914 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 280 299 1.6E-74 T 11-10-2018 Patl_1885 4f589b7c6c56113200ecb87d5a85a914 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 379 397 1.6E-74 T 11-10-2018 Patl_1885 4f589b7c6c56113200ecb87d5a85a914 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 135 153 1.6E-74 T 11-10-2018 Patl_1885 4f589b7c6c56113200ecb87d5a85a914 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 444 459 1.6E-74 T 11-10-2018 Patl_1885 4f589b7c6c56113200ecb87d5a85a914 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 468 485 1.6E-74 T 11-10-2018 Patl_1885 4f589b7c6c56113200ecb87d5a85a914 567 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 403 421 1.6E-74 T 11-10-2018 Patl_1885 4f589b7c6c56113200ecb87d5a85a914 567 Gene3D G3DSA:1.10.246.130 266 380 1.5E-33 T 11-10-2018 Patl_1885 4f589b7c6c56113200ecb87d5a85a914 567 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 43 555 4.4E-158 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 Patl_1885 4f589b7c6c56113200ecb87d5a85a914 567 SUPERFAMILY SSF56235 38 557 5.6E-166 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Patl_0385 5613e90cfb6fd7d550d18a735180ba60 142 Gene3D G3DSA:3.10.129.10 1 138 3.4E-39 T 11-10-2018 Patl_0385 5613e90cfb6fd7d550d18a735180ba60 142 SUPERFAMILY SSF54637 12 130 5.08E-37 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_0385 5613e90cfb6fd7d550d18a735180ba60 142 Pfam PF03061 Thioesterase superfamily 29 101 4.8E-19 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Patl_3367 53d89e76447cc82252bea7e7e94eb59c 230 SUPERFAMILY SSF51206 9 143 2.36E-36 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like Patl_3367 53d89e76447cc82252bea7e7e94eb59c 230 SMART SM00100 15 136 1.3E-17 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Patl_3367 53d89e76447cc82252bea7e7e94eb59c 230 Gene3D G3DSA:1.10.10.10 152 227 2.1E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3367 53d89e76447cc82252bea7e7e94eb59c 230 SUPERFAMILY SSF46785 152 228 1.3E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3367 53d89e76447cc82252bea7e7e94eb59c 230 SMART SM00419 172 220 0.0017 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Patl_3367 53d89e76447cc82252bea7e7e94eb59c 230 Gene3D G3DSA:2.60.120.10 4 151 1.1E-36 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_3367 53d89e76447cc82252bea7e7e94eb59c 230 Pfam PF00027 Cyclic nucleotide-binding domain 34 118 9.9E-21 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Patl_3367 53d89e76447cc82252bea7e7e94eb59c 230 Pfam PF13545 Crp-like helix-turn-helix domain 154 225 1.2E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Patl_3584 283b72ff93bdc22b4bda22d95cb06d66 413 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 6 401 4.7E-164 T 11-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative Patl_3584 283b72ff93bdc22b4bda22d95cb06d66 413 Gene3D G3DSA:3.20.20.70 56 198 6.8E-7 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_3584 283b72ff93bdc22b4bda22d95cb06d66 413 SUPERFAMILY SSF47781 306 385 3.45E-12 T 11-10-2018 IPR010994 RuvA domain 2-like Patl_3584 283b72ff93bdc22b4bda22d95cb06d66 413 SUPERFAMILY SSF102114 49 197 3.92E-11 T 11-10-2018 Patl_4205 5ba91e9ac24145c7da8a7d22414d0ccd 266 Pfam PF02582 Uncharacterised ACR, YagE family COG1723 48 214 3.8E-47 T 11-10-2018 IPR003734 Domain of unknown function DUF155 Patl_0795 c1bf2de31e873cfc879c4b5a49a2e4f4 549 ProSitePatterns PS00523 Sulfatases signature 1. 94 106 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_0795 c1bf2de31e873cfc879c4b5a49a2e4f4 549 Pfam PF00884 Sulfatase 46 400 6.4E-64 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_0795 c1bf2de31e873cfc879c4b5a49a2e4f4 549 Gene3D G3DSA:3.40.720.10 30 546 1.5E-118 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_0795 c1bf2de31e873cfc879c4b5a49a2e4f4 549 ProSitePatterns PS00149 Sulfatases signature 2. 136 146 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_0795 c1bf2de31e873cfc879c4b5a49a2e4f4 549 Pfam PF16347 Domain of unknown function (DUF4976) 488 530 2.9E-10 T 11-10-2018 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 Patl_0795 c1bf2de31e873cfc879c4b5a49a2e4f4 549 Pfam PF16347 Domain of unknown function (DUF4976) 403 461 2.6E-12 T 11-10-2018 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 Patl_0795 c1bf2de31e873cfc879c4b5a49a2e4f4 549 SUPERFAMILY SSF53649 43 527 1.34E-111 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_3853 6502c503655012cbdc752b0156e7288a 213 Pfam PF01810 LysE type translocator 16 207 3.5E-29 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Patl_3853 6502c503655012cbdc752b0156e7288a 213 PIRSF PIRSF006324 1 208 3.6E-55 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Patl_0730 04d899ee1f1295c79564b39c0dd52ccc 305 SUPERFAMILY SSF56349 109 295 7.36E-43 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Patl_0730 04d899ee1f1295c79564b39c0dd52ccc 305 Gene3D G3DSA:1.10.443.10 104 302 1.1E-40 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Patl_0730 04d899ee1f1295c79564b39c0dd52ccc 305 Pfam PF00589 Phage integrase family 113 283 2.5E-26 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Patl_3788 9861222434d1bd02ab98dadc03d079e3 84 Pfam PF04325 Protein of unknown function (DUF465) 30 76 2.1E-12 T 11-10-2018 IPR007420 Protein of unknown function DUF465 Patl_3788 9861222434d1bd02ab98dadc03d079e3 84 Gene3D G3DSA:1.20.58.660 13 83 1.3E-19 T 11-10-2018 Patl_0171 940fcbd28b792fe8b0d5eb3ac1bfc124 302 Pfam PF13401 AAA domain 42 171 6.8E-25 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_0171 940fcbd28b792fe8b0d5eb3ac1bfc124 302 Gene3D G3DSA:3.40.50.300 27 186 1.6E-13 T 11-10-2018 Patl_0171 940fcbd28b792fe8b0d5eb3ac1bfc124 302 SUPERFAMILY SSF52540 5 264 1.68E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0894 21c7de7e6d2ab78efd6acca3466e3c88 253 SMART SM00895 111 239 5.5E-21 T 11-10-2018 IPR011711 GntR, C-terminal Patl_0894 21c7de7e6d2ab78efd6acca3466e3c88 253 SMART SM00345 23 82 4.5E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_0894 21c7de7e6d2ab78efd6acca3466e3c88 253 Gene3D G3DSA:1.20.120.530 109 251 1.4E-24 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_0894 21c7de7e6d2ab78efd6acca3466e3c88 253 Gene3D G3DSA:1.10.10.10 14 87 1.8E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0894 21c7de7e6d2ab78efd6acca3466e3c88 253 SUPERFAMILY SSF48008 109 245 1.12E-23 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_0894 21c7de7e6d2ab78efd6acca3466e3c88 253 SUPERFAMILY SSF46785 18 86 3.13E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0894 21c7de7e6d2ab78efd6acca3466e3c88 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 5.1E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_0894 21c7de7e6d2ab78efd6acca3466e3c88 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 5.1E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_0894 21c7de7e6d2ab78efd6acca3466e3c88 253 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 1.9E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_0894 21c7de7e6d2ab78efd6acca3466e3c88 253 Pfam PF07729 FCD domain 111 238 1.4E-20 T 11-10-2018 IPR011711 GntR, C-terminal Patl_2695 9169aa808f4cd9ec5b524190cf734c2e 486 Pfam PF00884 Sulfatase 35 307 3.2E-62 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_2695 9169aa808f4cd9ec5b524190cf734c2e 486 ProSitePatterns PS00149 Sulfatases signature 2. 123 133 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_2695 9169aa808f4cd9ec5b524190cf734c2e 486 SUPERFAMILY SSF53649 33 447 1.78E-118 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_2695 9169aa808f4cd9ec5b524190cf734c2e 486 Gene3D G3DSA:3.40.720.10 34 449 2.0E-123 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_2695 9169aa808f4cd9ec5b524190cf734c2e 486 ProSitePatterns PS00523 Sulfatases signature 1. 81 93 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_1461 d5d9c2aff8ffa60f441d557c92e5ea18 132 Gene3D G3DSA:3.30.2130.10 1 131 5.4E-44 T 11-10-2018 Patl_1461 d5d9c2aff8ffa60f441d557c92e5ea18 132 SUPERFAMILY SSF55021 2 66 5.49E-18 T 11-10-2018 Patl_1461 d5d9c2aff8ffa60f441d557c92e5ea18 132 SUPERFAMILY SSF55021 69 130 6.41E-19 T 11-10-2018 Patl_1461 d5d9c2aff8ffa60f441d557c92e5ea18 132 Pfam PF10000 ACT domain 2 71 6.2E-25 T 11-10-2018 IPR018717 Domain of unknown function DUF2241 Patl_3867 f300fd0e3be0fb74abf58efaa030dc97 110 TIGRFAM TIGR04102 SWIM_PBPRA1643: SWIM/SEC-C metal-binding motif protein, PBPRA1643 family 3 110 3.0E-49 T 11-10-2018 IPR026368 SWIM/SEC-C metal-binding motif protein, PBPRA1643 family Patl_3867 f300fd0e3be0fb74abf58efaa030dc97 110 Gene3D G3DSA:3.10.450.50 37 110 4.2E-9 T 11-10-2018 Patl_3867 f300fd0e3be0fb74abf58efaa030dc97 110 SUPERFAMILY SSF103642 91 110 1.64E-7 T 11-10-2018 Patl_3867 f300fd0e3be0fb74abf58efaa030dc97 110 Pfam PF02810 SEC-C motif 93 110 8.4E-10 T 11-10-2018 IPR004027 SEC-C motif Patl_2828 7d988b49a12992642bba93a757fc3fbe 288 Gene3D G3DSA:1.10.150.650 98 169 6.4E-86 T 11-10-2018 Patl_2828 7d988b49a12992642bba93a757fc3fbe 288 Gene3D G3DSA:3.20.20.140 3 250 6.4E-86 T 11-10-2018 Patl_2828 7d988b49a12992642bba93a757fc3fbe 288 SUPERFAMILY SSF89550 1 275 2.55E-52 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Patl_2828 7d988b49a12992642bba93a757fc3fbe 288 Pfam PF02811 PHP domain 4 104 4.3E-10 T 11-10-2018 IPR004013 PHP domain GO:0003824 Patl_2828 7d988b49a12992642bba93a757fc3fbe 288 SMART SM00481 3 70 4.0E-19 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Patl_0147 f0c28ad07266dfc536f634acd5069b9c 447 SUPERFAMILY SSF103473 7 383 7.72E-61 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_0147 f0c28ad07266dfc536f634acd5069b9c 447 Gene3D G3DSA:1.20.1250.20 2 379 6.1E-73 T 11-10-2018 Patl_0147 f0c28ad07266dfc536f634acd5069b9c 447 Pfam PF07690 Major Facilitator Superfamily 13 348 3.0E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_0147 f0c28ad07266dfc536f634acd5069b9c 447 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Patl_1811 c304e719deefbb2ce6c1d6f49a4c3e64 225 SUPERFAMILY SSF53254 1 214 9.29E-35 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Patl_1811 c304e719deefbb2ce6c1d6f49a4c3e64 225 SMART SM00855 3 168 6.2E-4 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Patl_1811 c304e719deefbb2ce6c1d6f49a4c3e64 225 Gene3D G3DSA:3.40.50.1240 1 218 3.3E-31 T 11-10-2018 IPR029033 Histidine phosphatase superfamily Patl_1811 c304e719deefbb2ce6c1d6f49a4c3e64 225 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 209 2.8E-21 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Patl_0482 2b6cd37aa5de0944cddab7aa2b051ecb 181 Pfam PF04403 Paraquat-inducible protein A 23 119 8.6E-17 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like Patl_0604 223d5511bc7b47e14c2c7da0cb1ba4ef 641 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 448 602 1.0E-35 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_0604 223d5511bc7b47e14c2c7da0cb1ba4ef 641 Pfam PF02743 Cache domain 48 269 2.4E-12 T 11-10-2018 IPR033479 Double Cache domain 1 Patl_0604 223d5511bc7b47e14c2c7da0cb1ba4ef 641 Gene3D G3DSA:3.30.450.20 160 283 3.3E-13 T 11-10-2018 Patl_0604 223d5511bc7b47e14c2c7da0cb1ba4ef 641 SUPERFAMILY SSF58104 329 637 1.96E-61 T 11-10-2018 Patl_0604 223d5511bc7b47e14c2c7da0cb1ba4ef 641 Gene3D G3DSA:1.10.287.950 306 638 8.9E-60 T 11-10-2018 Patl_0604 223d5511bc7b47e14c2c7da0cb1ba4ef 641 SMART SM00304 307 361 1.5E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Patl_0604 223d5511bc7b47e14c2c7da0cb1ba4ef 641 SMART SM00283 372 637 8.5E-47 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Patl_0604 223d5511bc7b47e14c2c7da0cb1ba4ef 641 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 501 2.5E-24 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Patl_0604 223d5511bc7b47e14c2c7da0cb1ba4ef 641 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 503 532 2.5E-24 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Patl_0604 223d5511bc7b47e14c2c7da0cb1ba4ef 641 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 2.5E-24 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Patl_2404 ad44b95a5f39b72cf306c7ce04e4a3f8 154 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 6 133 2.4E-27 T 11-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain Patl_2404 ad44b95a5f39b72cf306c7ce04e4a3f8 154 Gene3D G3DSA:2.30.110.10 2 154 2.5E-30 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Patl_2404 ad44b95a5f39b72cf306c7ce04e4a3f8 154 SUPERFAMILY SSF50475 4 128 1.34E-20 T 11-10-2018 Patl_2517 09a58df0aecb2c90b835e39da12ad27c 321 Gene3D G3DSA:3.40.50.1100 42 144 2.3E-122 T 11-10-2018 Patl_2517 09a58df0aecb2c90b835e39da12ad27c 321 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 310 6.6E-138 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Patl_2517 09a58df0aecb2c90b835e39da12ad27c 321 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 297 1.8E-69 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Patl_2517 09a58df0aecb2c90b835e39da12ad27c 321 Gene3D G3DSA:3.40.50.1100 11 305 2.3E-122 T 11-10-2018 Patl_2517 09a58df0aecb2c90b835e39da12ad27c 321 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 310 8.5E-132 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Patl_2517 09a58df0aecb2c90b835e39da12ad27c 321 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Patl_2517 09a58df0aecb2c90b835e39da12ad27c 321 SUPERFAMILY SSF53686 1 310 1.18E-94 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Patl_0209 e3b9ace4ecf603d455f17fc679cd2de6 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 5.3E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0209 e3b9ace4ecf603d455f17fc679cd2de6 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 5.3E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0209 e3b9ace4ecf603d455f17fc679cd2de6 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 5.3E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0209 e3b9ace4ecf603d455f17fc679cd2de6 244 Gene3D G3DSA:3.40.50.720 4 239 4.2E-55 T 11-10-2018 Patl_0209 e3b9ace4ecf603d455f17fc679cd2de6 244 SUPERFAMILY SSF51735 2 215 1.14E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0209 e3b9ace4ecf603d455f17fc679cd2de6 244 Pfam PF00106 short chain dehydrogenase 8 189 2.1E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0209 e3b9ace4ecf603d455f17fc679cd2de6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 7.1E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0209 e3b9ace4ecf603d455f17fc679cd2de6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.1E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0209 e3b9ace4ecf603d455f17fc679cd2de6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 7.1E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0209 e3b9ace4ecf603d455f17fc679cd2de6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 7.1E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_0209 e3b9ace4ecf603d455f17fc679cd2de6 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 7.1E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1216 bbb4ec94301b33c835de1ae350700249 429 SMART SM00098 22 429 2.1E-117 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Patl_1216 bbb4ec94301b33c835de1ae350700249 429 SUPERFAMILY SSF53649 5 428 4.97E-116 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_1216 bbb4ec94301b33c835de1ae350700249 429 ProSitePatterns PS00123 Alkaline phosphatase active site. 76 84 - T 11-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Patl_1216 bbb4ec94301b33c835de1ae350700249 429 Pfam PF00245 Alkaline phosphatase 22 426 3.9E-105 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Patl_1216 bbb4ec94301b33c835de1ae350700249 429 Gene3D G3DSA:1.10.60.40 304 388 2.1E-137 T 11-10-2018 Patl_1216 bbb4ec94301b33c835de1ae350700249 429 PRINTS PR00113 Alkaline phosphatase signature 228 257 1.2E-31 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Patl_1216 bbb4ec94301b33c835de1ae350700249 429 PRINTS PR00113 Alkaline phosphatase signature 21 41 1.2E-31 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Patl_1216 bbb4ec94301b33c835de1ae350700249 429 PRINTS PR00113 Alkaline phosphatase signature 163 173 1.2E-31 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Patl_1216 bbb4ec94301b33c835de1ae350700249 429 PRINTS PR00113 Alkaline phosphatase signature 113 133 1.2E-31 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Patl_1216 bbb4ec94301b33c835de1ae350700249 429 PRINTS PR00113 Alkaline phosphatase signature 76 91 1.2E-31 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 Patl_1216 bbb4ec94301b33c835de1ae350700249 429 Gene3D G3DSA:3.40.720.10 25 419 2.1E-137 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_0992 38e9ac2b68a758762787a35534affecf 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 75 3.4E-28 T 11-10-2018 IPR013468 Conserved hypothetical protein CHP02647 Patl_0992 38e9ac2b68a758762787a35534affecf 77 Pfam PF06146 Phosphate-starvation-inducible E 8 71 8.5E-15 T 11-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like Patl_1117 45208a7a5d1ba417cfda64df32b5cdaa 939 Pfam PF00593 TonB dependent receptor 421 937 3.3E-34 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_1117 45208a7a5d1ba417cfda64df32b5cdaa 939 Gene3D G3DSA:2.170.130.10 48 186 1.1E-34 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_1117 45208a7a5d1ba417cfda64df32b5cdaa 939 SUPERFAMILY SSF56935 47 939 2.84E-85 T 11-10-2018 Patl_1117 45208a7a5d1ba417cfda64df32b5cdaa 939 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 182 3.6E-22 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1117 45208a7a5d1ba417cfda64df32b5cdaa 939 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 922 939 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 810 895 1.1E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 345 430 1.0E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 1273 1366 3.3E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 2483 2574 1.4E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 1552 1643 2.1E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 2298 2388 2.3E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 2948 3040 5.1E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 2017 2109 8.7E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 3133 3225 3.1E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 1737 1829 2.2E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 167 253 5.2E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 2575 2667 3.4E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 717 809 3.4E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 2668 2761 2.5E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 1088 1178 2.0E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 4273 4363 3.4E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 3226 3321 6.0E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 2210 2297 4.5E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 1923 2016 7.5E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 3702 3793 5.4E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 3322 3413 1.9E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 2110 2203 1.3E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 992 1087 8.5E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 1830 1922 2.5E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 2762 2853 2.8E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 3041 3132 1.0E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 2389 2482 2.3E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 1458 1551 5.3E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 3512 3603 1.4E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 2854 2947 1.6E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 4368 4462 1.5E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 1179 1272 8.1E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 1644 1736 1.4E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 908 991 2.9E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 1367 1457 8.2E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 3904 3988 7.2E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 4189 4272 6.7E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 629 716 1.4E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 535 628 9.1E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 3999 4083 7.2E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 3619 3701 3.9E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 439 534 2.3E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Gene3D G3DSA:2.60.40.10 3809 3893 9.3E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 1986 2009 0.045 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 1521 1544 0.016 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 2545 2568 7.9E-4 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 872 896 0.044 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 1428 1451 0.046 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 2824 2847 7.5E-4 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 1707 1730 0.048 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 1339 1361 0.099 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 404 431 0.003 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 2731 2754 8.6E-4 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 3010 3033 0.023 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 3103 3126 6.3E-4 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 590 617 0.0034 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 1241 1263 0.018 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 2638 2661 0.045 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 1149 1170 0.72 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 777 798 0.5 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 3196 3216 2.8 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 2079 2104 0.31 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 1893 1916 7.9E-4 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 3289 3314 3.2E-4 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 2452 2475 0.002 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 497 524 0.003 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 317 338 0.26 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 1800 1823 0.002 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 1058 1077 0.54 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 1614 1637 8.1E-5 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_2658 0068b9adcd1a4f317fc0e154964b8744 4689 Pfam PF12245 Bacterial Ig-like domain (group 3) 2917 2940 0.048 T 11-10-2018 IPR022038 Bacterial Ig-like domain Patl_0057 1712f74b63ac529efd7c7a4c4b1dd3cf 438 Gene3D G3DSA:3.40.50.11720 49 223 9.8E-38 T 11-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Patl_0057 1712f74b63ac529efd7c7a4c4b1dd3cf 438 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 51 224 3.9E-51 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 Patl_0057 1712f74b63ac529efd7c7a4c4b1dd3cf 438 Gene3D G3DSA:3.40.50.2000 230 419 2.5E-59 T 11-10-2018 Patl_0057 1712f74b63ac529efd7c7a4c4b1dd3cf 438 SUPERFAMILY SSF53756 113 419 8.63E-14 T 11-10-2018 Patl_0057 1712f74b63ac529efd7c7a4c4b1dd3cf 438 Pfam PF00534 Glycosyl transferases group 1 308 415 7.6E-9 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Patl_0136 615b533ab3f0791453d5e6d6589dc00e 198 Pfam PF04264 YceI-like domain 28 194 1.1E-15 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Patl_0136 615b533ab3f0791453d5e6d6589dc00e 198 Gene3D G3DSA:2.40.128.110 23 196 5.2E-51 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Patl_0136 615b533ab3f0791453d5e6d6589dc00e 198 SUPERFAMILY SSF101874 25 195 3.27E-25 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Patl_0136 615b533ab3f0791453d5e6d6589dc00e 198 SMART SM00867 27 195 3.3E-21 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Patl_0136 615b533ab3f0791453d5e6d6589dc00e 198 PIRSF PIRSF029811 3 197 1.4E-72 T 11-10-2018 IPR027016 Uncharacterised protein with YceI domain Patl_0620 36199705d2ce31cfa06533b411052c53 195 Gene3D G3DSA:3.40.30.10 4 82 2.2E-22 T 11-10-2018 Patl_0620 36199705d2ce31cfa06533b411052c53 195 Gene3D G3DSA:1.20.1050.10 83 185 2.2E-22 T 11-10-2018 Patl_0620 36199705d2ce31cfa06533b411052c53 195 SUPERFAMILY SSF52833 1 82 1.21E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_0620 36199705d2ce31cfa06533b411052c53 195 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 79 4.6E-10 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Patl_1200 50915abb8074deaada7f3c73f0807b35 378 Gene3D G3DSA:3.40.630.30 171 341 1.9E-6 T 11-10-2018 Patl_1200 50915abb8074deaada7f3c73f0807b35 378 Pfam PF13480 Acetyltransferase (GNAT) domain 189 337 2.8E-28 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Patl_1200 50915abb8074deaada7f3c73f0807b35 378 SUPERFAMILY SSF55729 179 346 2.88E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_3668 d00b4070dcf86563a298bbc40c4f9f9d 180 PIRSF PIRSF029681 1 180 5.5E-57 T 11-10-2018 IPR018550 Lipid A 3-O-deacylase-related Patl_3668 d00b4070dcf86563a298bbc40c4f9f9d 180 Gene3D G3DSA:2.40.160.20 33 179 3.9E-37 T 11-10-2018 Patl_3668 d00b4070dcf86563a298bbc40c4f9f9d 180 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 40 177 9.3E-33 T 11-10-2018 IPR018550 Lipid A 3-O-deacylase-related Patl_0149 2fcf405c6fef6726994c1d506d2d1100 802 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 168 1.9E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0149 2fcf405c6fef6726994c1d506d2d1100 802 SUPERFAMILY SSF56935 33 801 1.05E-98 T 11-10-2018 Patl_0149 2fcf405c6fef6726994c1d506d2d1100 802 Gene3D G3DSA:2.40.170.20 49 802 5.9E-109 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_0149 2fcf405c6fef6726994c1d506d2d1100 802 Pfam PF00593 TonB dependent receptor 281 799 6.1E-32 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0819 73983e0730ccd8dfb960071fda4a0061 523 Gene3D G3DSA:3.40.720.10 44 440 1.0E-106 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_0819 73983e0730ccd8dfb960071fda4a0061 523 ProSitePatterns PS00523 Sulfatases signature 1. 90 102 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_0819 73983e0730ccd8dfb960071fda4a0061 523 Gene3D G3DSA:3.30.1120.10 441 509 1.0E-106 T 11-10-2018 Patl_0819 73983e0730ccd8dfb960071fda4a0061 523 Pfam PF16385 Domain of unknown function 419 510 8.0E-23 T 11-10-2018 IPR032158 Domain of unknown function DUF4994 Patl_0819 73983e0730ccd8dfb960071fda4a0061 523 ProSitePatterns PS00149 Sulfatases signature 2. 136 146 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_0819 73983e0730ccd8dfb960071fda4a0061 523 Pfam PF00884 Sulfatase 44 414 7.5E-64 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_0819 73983e0730ccd8dfb960071fda4a0061 523 SUPERFAMILY SSF53649 42 520 1.4E-115 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_3840 67589ccbc21b50b4454a34a293506e15 220 Pfam PF02517 CAAX protease self-immunity 114 202 1.3E-9 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Patl_3529 1adea297ac28847190efe61deeaa5e54 270 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 28 212 0.0049 T 11-10-2018 Patl_3529 1adea297ac28847190efe61deeaa5e54 270 SUPERFAMILY SSF51735 26 269 4.41E-70 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3529 1adea297ac28847190efe61deeaa5e54 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 104 115 2.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3529 1adea297ac28847190efe61deeaa5e54 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 196 2.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3529 1adea297ac28847190efe61deeaa5e54 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 29 46 2.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3529 1adea297ac28847190efe61deeaa5e54 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 233 253 2.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3529 1adea297ac28847190efe61deeaa5e54 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 167 2.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3529 1adea297ac28847190efe61deeaa5e54 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 215 2.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3529 1adea297ac28847190efe61deeaa5e54 270 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 34 269 8.9E-58 T 11-10-2018 Patl_3529 1adea297ac28847190efe61deeaa5e54 270 Gene3D G3DSA:3.40.50.720 9 270 1.2E-69 T 11-10-2018 Patl_3529 1adea297ac28847190efe61deeaa5e54 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 165 7.3E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3529 1adea297ac28847190efe61deeaa5e54 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 196 7.3E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3529 1adea297ac28847190efe61deeaa5e54 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 104 115 7.3E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_3529 1adea297ac28847190efe61deeaa5e54 270 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 164 192 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Patl_3878 8c5b63c31ae8c2c2f2f1351795fc90fe 474 SUPERFAMILY SSF55073 318 467 1.1E-38 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_3878 8c5b63c31ae8c2c2f2f1351795fc90fe 474 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 310 468 2.5E-38 T 11-10-2018 IPR000160 GGDEF domain Patl_3878 8c5b63c31ae8c2c2f2f1351795fc90fe 474 Pfam PF00990 Diguanylate cyclase, GGDEF domain 315 464 1.6E-36 T 11-10-2018 IPR000160 GGDEF domain Patl_3878 8c5b63c31ae8c2c2f2f1351795fc90fe 474 SMART SM00267 302 469 4.3E-36 T 11-10-2018 IPR000160 GGDEF domain Patl_3878 8c5b63c31ae8c2c2f2f1351795fc90fe 474 Gene3D G3DSA:3.30.70.270 312 473 1.8E-43 T 11-10-2018 Patl_3145 1dafa845947c6f749166e2801afeea94 237 Pfam PF10144 Bacterial virulence factor haemolysin 51 185 4.5E-8 T 11-10-2018 IPR019305 Uncharacterised protein family Smp Patl_2491 03f77943b70ffe527bc05f043deb0372 223 Pfam PF11306 Protein of unknown function (DUF3108) 4 206 4.4E-16 T 11-10-2018 IPR021457 Protein of unknown function DUF3108 Patl_2528 32d185fe818edbff4f3c39e21dbf5a26 370 Gene3D G3DSA:3.40.190.10 10 354 1.2E-113 T 11-10-2018 Patl_2528 32d185fe818edbff4f3c39e21dbf5a26 370 Pfam PF13379 NMT1-like family 3 264 2.6E-75 T 11-10-2018 Patl_2528 32d185fe818edbff4f3c39e21dbf5a26 370 Gene3D G3DSA:3.40.190.10 95 217 1.2E-113 T 11-10-2018 Patl_2528 32d185fe818edbff4f3c39e21dbf5a26 370 SUPERFAMILY SSF53850 6 257 1.97E-26 T 11-10-2018 Patl_2772 a5104312205ccdec21e71064b3eba523 224 Gene3D G3DSA:3.40.109.10 17 224 7.0E-47 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Patl_2772 a5104312205ccdec21e71064b3eba523 224 Pfam PF00881 Nitroreductase family 24 199 3.5E-17 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Patl_2772 a5104312205ccdec21e71064b3eba523 224 SUPERFAMILY SSF55469 20 221 4.45E-40 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Patl_3955 e748a994fb02c4fa11e7b72f916acc32 294 Pfam PF02219 Methylenetetrahydrofolate reductase 17 290 3.3E-98 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Patl_3955 e748a994fb02c4fa11e7b72f916acc32 294 SUPERFAMILY SSF51730 21 292 1.37E-92 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like Patl_3955 e748a994fb02c4fa11e7b72f916acc32 294 Gene3D G3DSA:3.20.20.220 2 294 1.1E-106 T 11-10-2018 Patl_3955 e748a994fb02c4fa11e7b72f916acc32 294 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 23 289 1.2E-99 T 11-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 Patl_2663 ff088c9afc1a4640072a18a22b4f37b6 253 Gene3D G3DSA:3.10.620.30 53 252 1.2E-64 T 11-10-2018 Patl_2663 ff088c9afc1a4640072a18a22b4f37b6 253 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 89 201 2.1E-11 T 11-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted Patl_2663 ff088c9afc1a4640072a18a22b4f37b6 253 SUPERFAMILY SSF54001 87 218 1.05E-10 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Patl_3874 1bbca68ba2aa498aba14ded69b9bf36c 359 SUPERFAMILY SSF56601 10 348 1.52E-58 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Patl_3874 1bbca68ba2aa498aba14ded69b9bf36c 359 Pfam PF00144 Beta-lactamase 10 330 3.4E-47 T 11-10-2018 IPR001466 Beta-lactamase-related Patl_3874 1bbca68ba2aa498aba14ded69b9bf36c 359 Gene3D G3DSA:3.40.710.10 6 339 1.3E-59 T 11-10-2018 Patl_0302 7f31e3959a55b7c7621b76c3e066baec 331 SUPERFAMILY SSF56219 63 330 1.06E-25 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Patl_0302 7f31e3959a55b7c7621b76c3e066baec 331 Gene3D G3DSA:3.60.10.10 65 331 1.1E-22 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Patl_0302 7f31e3959a55b7c7621b76c3e066baec 331 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 69 323 3.9E-6 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Patl_4213 3d11d35f80d4f910f9db7d312609b83e 84 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 82 24.093 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Patl_4213 3d11d35f80d4f910f9db7d312609b83e 84 Pfam PF02416 mttA/Hcf106 family 4 56 2.8E-14 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Patl_4213 3d11d35f80d4f910f9db7d312609b83e 84 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.2E-22 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Patl_1967 bfe9f04ea8158f0b7b09448cbd75250a 89 Pfam PF01381 Helix-turn-helix 22 62 3.0E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_1967 bfe9f04ea8158f0b7b09448cbd75250a 89 SUPERFAMILY SSF47413 6 64 2.41E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_1967 bfe9f04ea8158f0b7b09448cbd75250a 89 Gene3D G3DSA:1.10.260.40 2 61 2.6E-6 T 11-10-2018 Patl_0801 ea7d8935c8895c7b62c7dd04d0151c2c 474 SUPERFAMILY SSF103473 27 465 5.89E-24 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_0801 ea7d8935c8895c7b62c7dd04d0151c2c 474 Gene3D G3DSA:1.20.1250.20 27 270 2.1E-51 T 11-10-2018 Patl_0801 ea7d8935c8895c7b62c7dd04d0151c2c 474 Pfam PF07690 Major Facilitator Superfamily 44 179 1.6E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_0801 ea7d8935c8895c7b62c7dd04d0151c2c 474 Gene3D G3DSA:1.20.1250.20 275 470 1.6E-47 T 11-10-2018 Patl_0801 ea7d8935c8895c7b62c7dd04d0151c2c 474 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 29 467 1.9E-157 T 11-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 Patl_2750 de08f31717340b54fe8ba2443d69f559 327 Pfam PF08894 Protein of unknown function (DUF1838) 72 315 2.5E-94 T 11-10-2018 IPR014990 Protein of unknown function DUF1838 Patl_2308 23deb74ec355097edcfcf4cd77e3a5d4 270 Pfam PF00756 Putative esterase 26 255 2.3E-19 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Patl_2308 23deb74ec355097edcfcf4cd77e3a5d4 270 Gene3D G3DSA:3.40.50.1820 18 266 4.7E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2308 23deb74ec355097edcfcf4cd77e3a5d4 270 SUPERFAMILY SSF53474 8 261 2.57E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3300 fcb79a099da8d35454e3add817a2e7bb 798 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 112 797 1.0E-278 T 11-10-2018 IPR010706 Fatty acid cis-trans isomerase Patl_2914 eaf178ba84cf723dd0d5c041c31998ed 212 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 39 195 5.4E-23 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain Patl_2914 eaf178ba84cf723dd0d5c041c31998ed 212 SUPERFAMILY SSF52266 35 208 1.98E-49 T 11-10-2018 Patl_2914 eaf178ba84cf723dd0d5c041c31998ed 212 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 36 46 - T 11-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 Patl_2914 eaf178ba84cf723dd0d5c041c31998ed 212 Gene3D G3DSA:3.40.50.1110 33 212 4.6E-65 T 11-10-2018 IPR036514 SGNH hydrolase superfamily Patl_1872 3aa2735be0cba365117ed515d347447c 381 Pfam PF08495 FIST N domain 34 230 6.2E-32 T 11-10-2018 IPR013702 FIST domain, N-terminal Patl_1872 3aa2735be0cba365117ed515d347447c 381 Pfam PF10442 FIST C domain 234 362 3.4E-15 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Patl_1872 3aa2735be0cba365117ed515d347447c 381 SMART SM00897 31 232 3.8E-54 T 11-10-2018 IPR013702 FIST domain, N-terminal Patl_1872 3aa2735be0cba365117ed515d347447c 381 SMART SM01204 233 364 3.4E-30 T 11-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Patl_4315 6e57a75f48473cf95519bde47b042f9d 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_4315 6e57a75f48473cf95519bde47b042f9d 44 Pfam PF00468 Ribosomal protein L34 1 44 1.4E-25 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_4315 6e57a75f48473cf95519bde47b042f9d 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 2.0E-12 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_4315 6e57a75f48473cf95519bde47b042f9d 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 5.7E-27 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_4315 6e57a75f48473cf95519bde47b042f9d 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.617 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0963 36e96679cb3e4961494753aa730cb8b4 111 Pfam PF12514 Protein of unknown function (DUF3718) 38 103 8.6E-23 T 11-10-2018 IPR022193 Protein of unknown function DUF3718 Patl_3241 1e6a21c5319fa98530a13076f8d0d5ab 587 Gene3D G3DSA:3.30.1950.10 112 183 1.3E-15 T 11-10-2018 Patl_3241 1e6a21c5319fa98530a13076f8d0d5ab 587 Gene3D G3DSA:3.10.560.10 106 268 1.3E-15 T 11-10-2018 Patl_3241 1e6a21c5319fa98530a13076f8d0d5ab 587 Gene3D G3DSA:3.10.560.10 269 287 1.3E-15 T 11-10-2018 Patl_3241 1e6a21c5319fa98530a13076f8d0d5ab 587 Pfam PF02563 Polysaccharide biosynthesis/export protein 106 179 2.3E-14 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Patl_3241 1e6a21c5319fa98530a13076f8d0d5ab 587 Gene3D G3DSA:3.10.560.10 476 557 1.7E-7 T 11-10-2018 Patl_3241 1e6a21c5319fa98530a13076f8d0d5ab 587 Pfam PF10531 SLBB domain 481 524 0.0015 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Patl_2673 3fcecd19b8551f6e3b48602d963b64a9 92 SUPERFAMILY SSF81333 6 80 9.42E-18 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Patl_2673 3fcecd19b8551f6e3b48602d963b64a9 92 Gene3D G3DSA:1.20.20.10 5 83 1.1E-24 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2673 3fcecd19b8551f6e3b48602d963b64a9 92 Pfam PF00137 ATP synthase subunit C 13 76 3.1E-13 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Patl_2673 3fcecd19b8551f6e3b48602d963b64a9 92 PRINTS PR00124 ATP synthase C subunit signature 52 77 8.3E-12 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2673 3fcecd19b8551f6e3b48602d963b64a9 92 PRINTS PR00124 ATP synthase C subunit signature 14 33 8.3E-12 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2673 3fcecd19b8551f6e3b48602d963b64a9 92 PRINTS PR00124 ATP synthase C subunit signature 35 50 8.3E-12 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2673 3fcecd19b8551f6e3b48602d963b64a9 92 Hamap MF_01396 ATP synthase subunit c [atpH]. 12 77 13.932 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2673 3fcecd19b8551f6e3b48602d963b64a9 92 TIGRFAM TIGR03322 alt_F1F0_F0_C: alternate F1F0 ATPase, F0 subunit C 2 87 1.4E-47 T 11-10-2018 IPR017708 Alternate ATP synthase, F0 complex, subunit C, bacterial/archaeal Patl_1766 0049a1b1d07f7bb38ac3610b3210c962 210 Gene3D G3DSA:3.30.70.1230 1 113 6.7E-6 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_0116 9f7b4ab8f90c6272316b275676d48e58 760 Gene3D G3DSA:1.20.1610.10 487 636 1.1E-213 T 11-10-2018 Patl_0116 9f7b4ab8f90c6272316b275676d48e58 760 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 30 758 2.3E-203 T 11-10-2018 IPR005887 Alpha-1,2-mannosidase, putative Patl_0116 9f7b4ab8f90c6272316b275676d48e58 760 Pfam PF07971 Glycosyl hydrolase family 92 280 758 5.0E-159 T 11-10-2018 IPR012939 Glycosyl hydrolase family 92 Patl_0116 9f7b4ab8f90c6272316b275676d48e58 760 Gene3D G3DSA:1.20.1050.60 394 486 1.1E-213 T 11-10-2018 Patl_0116 9f7b4ab8f90c6272316b275676d48e58 760 Gene3D G3DSA:3.30.2080.10 338 758 1.1E-213 T 11-10-2018 Patl_0116 9f7b4ab8f90c6272316b275676d48e58 760 SUPERFAMILY SSF48208 303 688 1.16E-26 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Patl_0116 9f7b4ab8f90c6272316b275676d48e58 760 Gene3D G3DSA:2.70.98.10 39 393 1.1E-213 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Patl_1204 ce03e1beb4d2c31c1b91c4a55061e880 269 Pfam PF13444 Acetyltransferase (GNAT) domain 57 157 1.7E-17 T 11-10-2018 Patl_1204 ce03e1beb4d2c31c1b91c4a55061e880 269 TIGRFAM TIGR03694 exosort_acyl: N-acyl amino acid synthase, PEP-CTERM/exosortase system-associated 34 267 4.2E-77 T 11-10-2018 IPR022484 PEP-CTERM/exosortase system-associated acyltransferase, predicted Patl_1204 ce03e1beb4d2c31c1b91c4a55061e880 269 SUPERFAMILY SSF55729 39 240 1.75E-29 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_1204 ce03e1beb4d2c31c1b91c4a55061e880 269 Gene3D G3DSA:3.40.630.30 42 258 7.4E-53 T 11-10-2018 Patl_0830 bd8a4226824e86897de76f681da929ab 635 SUPERFAMILY SSF49785 248 362 5.71E-8 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0830 bd8a4226824e86897de76f681da929ab 635 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 402 500 1.7E-12 T 11-10-2018 IPR005181 Sialate O-acetylesterase domain Patl_0830 bd8a4226824e86897de76f681da929ab 635 Gene3D G3DSA:2.60.120.260 240 391 5.5E-7 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0830 bd8a4226824e86897de76f681da929ab 635 SUPERFAMILY SSF52266 106 588 8.15E-71 T 11-10-2018 Patl_0830 bd8a4226824e86897de76f681da929ab 635 Gene3D G3DSA:3.40.50.1110 398 520 6.1E-14 T 11-10-2018 IPR036514 SGNH hydrolase superfamily Patl_2891 0c0a18d69b853786edf341508a8ad82a 154 Gene3D G3DSA:2.60.40.790 34 139 6.8E-25 T 11-10-2018 IPR008978 HSP20-like chaperone Patl_2891 0c0a18d69b853786edf341508a8ad82a 154 Pfam PF00011 Hsp20/alpha crystallin family 45 138 2.1E-21 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Patl_2891 0c0a18d69b853786edf341508a8ad82a 154 SUPERFAMILY SSF49764 6 138 4.19E-22 T 11-10-2018 IPR008978 HSP20-like chaperone Patl_0613 44e5f6866b53b7f3632f01b4f1551d59 221 Pfam PF03695 Uncharacterised protein family (UPF0149) 9 190 1.4E-21 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 Patl_0613 44e5f6866b53b7f3632f01b4f1551d59 221 SUPERFAMILY SSF101327 14 136 1.24E-10 T 11-10-2018 IPR036255 YgfB-like superfamily Patl_0613 44e5f6866b53b7f3632f01b4f1551d59 221 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 9 138 2.6E-11 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 Patl_2931 6fb5b241649369e802a0001dbbdd43ba 179 SUPERFAMILY SSF55961 24 174 5.9E-22 T 11-10-2018 Patl_2931 6fb5b241649369e802a0001dbbdd43ba 179 Gene3D G3DSA:3.30.530.20 23 179 1.2E-14 T 11-10-2018 IPR023393 START-like domain superfamily Patl_2931 6fb5b241649369e802a0001dbbdd43ba 179 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 27 171 4.0E-16 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase Patl_3386 d815fd8443e1a39250fcef9c7c59c1e9 378 SUPERFAMILY SSF53784 95 142 7.06E-7 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Patl_3386 d815fd8443e1a39250fcef9c7c59c1e9 378 PIRSF PIRSF016907 4 377 4.5E-127 T 11-10-2018 IPR011386 Putative ATP-NAD kinase Patl_3386 d815fd8443e1a39250fcef9c7c59c1e9 378 Gene3D G3DSA:3.40.50.450 76 195 1.2E-6 T 11-10-2018 Patl_3386 d815fd8443e1a39250fcef9c7c59c1e9 378 Pfam PF01513 ATP-NAD kinase 7 372 2.0E-45 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Patl_3742 7b18225aa3eb0d9d3464a8045eec9c98 188 Gene3D G3DSA:1.10.10.10 129 185 5.7E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3742 7b18225aa3eb0d9d3464a8045eec9c98 188 Pfam PF08281 Sigma-70, region 4 131 181 1.1E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Patl_3742 7b18225aa3eb0d9d3464a8045eec9c98 188 Pfam PF04542 Sigma-70 region 2 37 103 3.1E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Patl_3742 7b18225aa3eb0d9d3464a8045eec9c98 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 183 2.7E-26 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Patl_3742 7b18225aa3eb0d9d3464a8045eec9c98 188 Gene3D G3DSA:1.10.1740.10 11 128 9.8E-27 T 11-10-2018 Patl_3742 7b18225aa3eb0d9d3464a8045eec9c98 188 SUPERFAMILY SSF88946 16 114 1.43E-28 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Patl_3742 7b18225aa3eb0d9d3464a8045eec9c98 188 SUPERFAMILY SSF88659 130 185 1.55E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Patl_1347 e1e44855f982af4affa21fad6556f7eb 279 Gene3D G3DSA:3.90.1200.10 100 276 4.3E-16 T 11-10-2018 Patl_1347 e1e44855f982af4affa21fad6556f7eb 279 SUPERFAMILY SSF56112 34 235 7.48E-22 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Patl_1347 e1e44855f982af4affa21fad6556f7eb 279 Pfam PF01636 Phosphotransferase enzyme family 33 216 6.8E-14 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase Patl_2190 bef5036009eb934f8fc18c2007c85745 256 Gene3D G3DSA:1.20.1540.10 7 188 5.5E-11 T 11-10-2018 IPR035952 Rhomboid-like superfamily Patl_2190 bef5036009eb934f8fc18c2007c85745 256 Pfam PF01694 Rhomboid family 51 181 1.2E-15 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Patl_2190 bef5036009eb934f8fc18c2007c85745 256 SUPERFAMILY SSF144091 15 185 9.16E-22 T 11-10-2018 Patl_3042 48a68073c52f29158b0385fd3fb8b5f3 723 Gene3D G3DSA:3.30.750.140 561 685 3.4E-29 T 11-10-2018 IPR038610 FliK-like, C-terminal domain superfamily Patl_3042 48a68073c52f29158b0385fd3fb8b5f3 723 Pfam PF02120 Flagellar hook-length control protein FliK 595 677 2.0E-19 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Patl_0960 c40d5958d34fdc0e2fe1370753016d48 483 SUPERFAMILY SSF56935 131 415 2.62E-6 T 11-10-2018 Patl_2102 cf4182e6d401611e7b18871b9ce4a4af 194 Pfam PF00583 Acetyltransferase (GNAT) family 116 172 3.1E-6 T 11-10-2018 IPR000182 GNAT domain Patl_2102 cf4182e6d401611e7b18871b9ce4a4af 194 Gene3D G3DSA:3.40.630.30 27 189 3.4E-31 T 11-10-2018 Patl_2102 cf4182e6d401611e7b18871b9ce4a4af 194 SUPERFAMILY SSF55729 31 184 7.89E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_3277 e0d9762194305cb1d25e34f17b12f4fe 510 Gene3D G3DSA:3.50.50.60 20 508 4.7E-186 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3277 e0d9762194305cb1d25e34f17b12f4fe 510 PIRSF PIRSF011396 18 510 1.1E-200 T 11-10-2018 IPR033856 Flavin-dependent tryptophan halogenase Patl_3277 e0d9762194305cb1d25e34f17b12f4fe 510 Pfam PF04820 Tryptophan halogenase 25 474 2.7E-187 T 11-10-2018 IPR006905 Flavin-dependent halogenase Patl_3277 e0d9762194305cb1d25e34f17b12f4fe 510 SUPERFAMILY SSF51905 25 433 1.2E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3341 9126d4788e6e7606f95b6496bbfcf341 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 197 26.792 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Patl_3341 9126d4788e6e7606f95b6496bbfcf341 204 Gene3D G3DSA:3.40.50.300 1 203 2.8E-65 T 11-10-2018 Patl_3341 9126d4788e6e7606f95b6496bbfcf341 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 187 2.9E-57 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Patl_3341 9126d4788e6e7606f95b6496bbfcf341 204 Pfam PF01121 Dephospho-CoA kinase 4 179 5.2E-63 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Patl_3341 9126d4788e6e7606f95b6496bbfcf341 204 SUPERFAMILY SSF52540 1 192 5.33E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1813 2f0f1cd43bfbb36f90d65f9c4a386943 344 Gene3D G3DSA:3.90.1200.10 111 344 3.8E-87 T 11-10-2018 Patl_1813 2f0f1cd43bfbb36f90d65f9c4a386943 344 Pfam PF01636 Phosphotransferase enzyme family 32 248 8.8E-48 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase Patl_1813 2f0f1cd43bfbb36f90d65f9c4a386943 344 Gene3D G3DSA:3.30.200.20 9 110 5.4E-38 T 11-10-2018 Patl_1813 2f0f1cd43bfbb36f90d65f9c4a386943 344 SUPERFAMILY SSF56112 9 340 4.67E-58 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Patl_4110 084498b3980f58f3f8087820468d0dad 399 SUPERFAMILY SSF56935 23 395 1.35E-24 T 11-10-2018 Patl_3691 92b39478a60fd0b39c046848386017a1 165 SUPERFAMILY SSF53098 9 163 1.06E-14 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_3691 92b39478a60fd0b39c046848386017a1 165 Gene3D G3DSA:3.30.420.10 7 164 2.3E-12 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Patl_2905 fd777001962919d7e9cc7894d5ccc01c 107 Pfam PF11169 Protein of unknown function (DUF2956) 6 102 3.3E-39 T 11-10-2018 IPR021339 Protein of unknown function DUF2956 Patl_1196 a4f011c06691c955a7dd7d2d8f6e6ba6 335 SUPERFAMILY SSF88713 40 324 1.17E-10 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Patl_1196 a4f011c06691c955a7dd7d2d8f6e6ba6 335 Gene3D G3DSA:3.20.20.370 5 334 1.2E-23 T 11-10-2018 Patl_0566 d8901966bb09e8a97875849cf4dbd6c4 173 Pfam PF03968 OstA-like protein 15 120 5.2E-20 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Patl_0566 d8901966bb09e8a97875849cf4dbd6c4 173 Gene3D G3DSA:2.60.450.10 5 149 2.4E-34 T 11-10-2018 Patl_0566 d8901966bb09e8a97875849cf4dbd6c4 173 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 4 144 3.8E-37 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 Patl_1118 903c12abbe09c47f49c2a94c3994fa98 412 Pfam PF03390 2-hydroxycarboxylate transporter family 3 405 3.4E-111 T 11-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 Patl_1118 903c12abbe09c47f49c2a94c3994fa98 412 PIRSF PIRSF005348 1 412 2.8E-130 T 11-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 Patl_3066 398462bff89f09dbe8604959f28e2bd4 402 SUPERFAMILY SSF53448 3 232 1.04E-45 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3066 398462bff89f09dbe8604959f28e2bd4 402 Gene3D G3DSA:3.90.550.10 1 248 3.0E-49 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3066 398462bff89f09dbe8604959f28e2bd4 402 Pfam PF00535 Glycosyl transferase family 2 5 134 2.2E-31 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Patl_1482 1195d9e7bda374f1b6869c30cd6aacc7 311 Gene3D G3DSA:1.25.40.10 119 305 1.5E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1482 1195d9e7bda374f1b6869c30cd6aacc7 311 SUPERFAMILY SSF81901 200 281 9.29E-9 T 11-10-2018 Patl_1060 1eff2d80a7abcb40af6633797e6a6ba0 256 Pfam PF11932 Protein of unknown function (DUF3450) 14 252 8.8E-95 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 Patl_1060 1eff2d80a7abcb40af6633797e6a6ba0 256 PIRSF PIRSF028069 6 256 4.3E-85 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 Patl_0043 66feca775ea847e40bceba564453335c 618 Pfam PF05960 Bacterial protein of unknown function (DUF885) 61 603 2.2E-173 T 11-10-2018 IPR010281 Protein of unknown function DUF885 Patl_1274 e9b2b680f0869931dfd1d9e783676457 376 SUPERFAMILY SSF52151 6 279 7.06E-47 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Patl_1274 e9b2b680f0869931dfd1d9e783676457 376 Gene3D G3DSA:3.40.1090.10 1 183 7.5E-20 T 11-10-2018 Patl_1274 e9b2b680f0869931dfd1d9e783676457 376 Pfam PF01734 Patatin-like phospholipase 9 221 7.5E-23 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Patl_1919 fe36d1daaede39c6595d2fed46f9231b 309 Pfam PF00561 alpha/beta hydrolase fold 31 296 1.1E-25 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_1919 fe36d1daaede39c6595d2fed46f9231b 309 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 70 4.4E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_1919 fe36d1daaede39c6595d2fed46f9231b 309 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 4.4E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_1919 fe36d1daaede39c6595d2fed46f9231b 309 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 4.4E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_1919 fe36d1daaede39c6595d2fed46f9231b 309 SUPERFAMILY SSF53474 3 307 7.74E-68 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1919 fe36d1daaede39c6595d2fed46f9231b 309 Gene3D G3DSA:3.40.50.1820 3 308 4.1E-86 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1919 fe36d1daaede39c6595d2fed46f9231b 309 PRINTS PR00412 Epoxide hydrolase signature 116 129 1.0E-14 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_1919 fe36d1daaede39c6595d2fed46f9231b 309 PRINTS PR00412 Epoxide hydrolase signature 284 306 1.0E-14 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_1919 fe36d1daaede39c6595d2fed46f9231b 309 PRINTS PR00412 Epoxide hydrolase signature 251 267 1.0E-14 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_1919 fe36d1daaede39c6595d2fed46f9231b 309 PRINTS PR00412 Epoxide hydrolase signature 36 54 1.0E-14 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_1919 fe36d1daaede39c6595d2fed46f9231b 309 PRINTS PR00412 Epoxide hydrolase signature 102 115 1.0E-14 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 Patl_1531 2841a49276fa15ca5b6486b3c6b1aa22 257 Gene3D G3DSA:3.40.50.720 49 256 4.1E-30 T 11-10-2018 Patl_1531 2841a49276fa15ca5b6486b3c6b1aa22 257 SUPERFAMILY SSF51735 55 248 1.86E-24 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1531 2841a49276fa15ca5b6486b3c6b1aa22 257 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 56 242 4.4E-21 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Patl_3064 b7262d2eca2e26f92d901a93d0f9b934 438 Gene3D G3DSA:3.90.550.10 2 220 7.0E-17 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3064 b7262d2eca2e26f92d901a93d0f9b934 438 Pfam PF00535 Glycosyl transferase family 2 7 116 6.5E-10 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Patl_3064 b7262d2eca2e26f92d901a93d0f9b934 438 SUPERFAMILY SSF53448 4 137 1.88E-19 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_0305 dd00e6eb6fa15a16d490d2961549c4bd 193 Pfam PF11736 Protein of unknown function (DUF3299) 37 187 6.4E-45 T 11-10-2018 IPR021727 Protein of unknown function DUF3299 Patl_0305 dd00e6eb6fa15a16d490d2961549c4bd 193 Gene3D G3DSA:2.40.50.870 30 193 1.0E-41 T 11-10-2018 Patl_0692 e906d29095049c5be0341e3f4a4bd092 81 Pfam PF04606 Ogr/Delta-like zinc finger 4 51 4.7E-17 T 11-10-2018 IPR007684 Zinc finger, Ogr/Delta-type Patl_1978 85840e118636c17119621c4d5a59edd7 400 Gene3D G3DSA:1.10.1740.110 210 317 4.6E-109 T 11-10-2018 Patl_1978 85840e118636c17119621c4d5a59edd7 400 PIRSF PIRSF000443 10 400 3.4E-103 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Patl_1978 85840e118636c17119621c4d5a59edd7 400 SUPERFAMILY SSF53474 32 397 7.36E-70 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1978 85840e118636c17119621c4d5a59edd7 400 Pfam PF00561 alpha/beta hydrolase fold 148 251 3.8E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_1978 85840e118636c17119621c4d5a59edd7 400 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 24 397 22.12 T 11-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 Patl_1978 85840e118636c17119621c4d5a59edd7 400 Gene3D G3DSA:3.40.50.1820 46 383 4.6E-109 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3652 fd7404088df244dd0ba7060a10f9e0b9 384 SUPERFAMILY SSF160240 299 376 3.66E-5 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Patl_3652 fd7404088df244dd0ba7060a10f9e0b9 384 Gene3D G3DSA:1.20.1510.10 106 292 6.0E-36 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Patl_3652 fd7404088df244dd0ba7060a10f9e0b9 384 Pfam PF01545 Cation efflux family 110 288 2.5E-38 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Patl_3652 fd7404088df244dd0ba7060a10f9e0b9 384 SUPERFAMILY SSF161111 106 292 2.22E-42 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Patl_3652 fd7404088df244dd0ba7060a10f9e0b9 384 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 107 375 6.5E-57 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Patl_2157 abbcf42c3685edb579f17926c9201cae 166 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 7 155 3.8E-64 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Patl_2157 abbcf42c3685edb579f17926c9201cae 166 Pfam PF01967 MoaC family 18 153 8.5E-55 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Patl_2157 abbcf42c3685edb579f17926c9201cae 166 Gene3D G3DSA:3.30.70.640 5 164 1.1E-67 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Patl_2157 abbcf42c3685edb579f17926c9201cae 166 SUPERFAMILY SSF55040 14 158 1.23E-60 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Patl_2157 abbcf42c3685edb579f17926c9201cae 166 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 5 161 35.387 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Patl_2755 3a1f7b1b5d17d39f9452bec45594dfd0 269 Gene3D G3DSA:3.40.50.1820 2 262 3.1E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2755 3a1f7b1b5d17d39f9452bec45594dfd0 269 SUPERFAMILY SSF53474 5 228 4.06E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2755 3a1f7b1b5d17d39f9452bec45594dfd0 269 Pfam PF00561 alpha/beta hydrolase fold 30 133 1.5E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_0971 5fb77628b9ec39ecda215a06211e38ce 230 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 8 224 5.6E-60 T 11-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 Patl_0971 5fb77628b9ec39ecda215a06211e38ce 230 SUPERFAMILY SSF100950 8 226 1.73E-56 T 11-10-2018 IPR037171 NagB/RpiA transferase-like Patl_0971 5fb77628b9ec39ecda215a06211e38ce 230 Gene3D G3DSA:3.40.50.1360 2 230 6.9E-73 T 11-10-2018 Patl_0971 5fb77628b9ec39ecda215a06211e38ce 230 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 228 6.5E-60 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 Patl_0998 06df23b89344b5043c0eeba2ac6fbee4 546 SUPERFAMILY SSF56801 5 535 3.27E-113 T 11-10-2018 Patl_0998 06df23b89344b5043c0eeba2ac6fbee4 546 Pfam PF00501 AMP-binding enzyme 14 425 8.7E-89 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Patl_0998 06df23b89344b5043c0eeba2ac6fbee4 546 Gene3D G3DSA:3.30.300.30 426 532 9.2E-8 T 11-10-2018 Patl_0998 06df23b89344b5043c0eeba2ac6fbee4 546 Gene3D G3DSA:3.40.50.12780 4 418 4.9E-84 T 11-10-2018 Patl_0998 06df23b89344b5043c0eeba2ac6fbee4 546 ProSitePatterns PS00455 Putative AMP-binding domain signature. 167 178 - T 11-10-2018 IPR020845 AMP-binding, conserved site Patl_2401 47d37106726a47d47416396c9d310178 325 Gene3D G3DSA:3.40.50.1000 88 301 1.0E-5 T 11-10-2018 IPR023214 HAD superfamily Patl_2401 47d37106726a47d47416396c9d310178 325 Pfam PF11019 Protein of unknown function (DUF2608) 70 312 1.9E-87 T 11-10-2018 IPR022565 Protein of unknown function DUF2608 Patl_2401 47d37106726a47d47416396c9d310178 325 ProDom PD187055 MEMBRANE OUTER PRECURSOR SIGNAL EXPORTED CT371 CPN1072 CPN1073/CP0776/CPJ1073/CPB1118 CP0777 CPJ1072 92 282 1.0E-5 T 11-10-2018 Patl_2401 47d37106726a47d47416396c9d310178 325 SUPERFAMILY SSF56784 90 279 5.93E-7 T 11-10-2018 IPR036412 HAD-like superfamily Patl_3439 b0b98ebc9dc146a0641c0511d1385bdb 339 SUPERFAMILY SSF56112 25 286 1.05E-22 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Patl_3439 b0b98ebc9dc146a0641c0511d1385bdb 339 Pfam PF02958 Ecdysteroid kinase 194 266 5.2E-10 T 11-10-2018 IPR004119 Protein of unknown function DUF227 Patl_3439 b0b98ebc9dc146a0641c0511d1385bdb 339 SMART SM00587 114 270 0.0094 T 11-10-2018 IPR015897 CHK kinase-like Patl_1559 dcf3b09f4c67d1dcd9f8f00ef88f4a0f 374 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 327 351 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_1559 dcf3b09f4c67d1dcd9f8f00ef88f4a0f 374 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 17 372 28.186 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_1559 dcf3b09f4c67d1dcd9f8f00ef88f4a0f 374 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 23 369 2.9E-134 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_1559 dcf3b09f4c67d1dcd9f8f00ef88f4a0f 374 Pfam PF01098 Cell cycle protein 27 370 5.1E-111 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_1259 911f0fa8c863c0948ee8d4af1c2ae50c 344 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 10 331 35.804 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Patl_1259 911f0fa8c863c0948ee8d4af1c2ae50c 344 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 29 94 1.6E-20 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 Patl_1259 911f0fa8c863c0948ee8d4af1c2ae50c 344 Gene3D G3DSA:3.40.1390.10 2 103 3.0E-27 T 11-10-2018 Patl_1259 911f0fa8c863c0948ee8d4af1c2ae50c 344 Gene3D G3DSA:2.160.10.10 105 313 4.0E-64 T 11-10-2018 Patl_1259 911f0fa8c863c0948ee8d4af1c2ae50c 344 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 13 334 8.3E-115 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 Patl_1259 911f0fa8c863c0948ee8d4af1c2ae50c 344 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 227 262 1.4E-7 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_1259 911f0fa8c863c0948ee8d4af1c2ae50c 344 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 151 184 5.3E-5 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_1259 911f0fa8c863c0948ee8d4af1c2ae50c 344 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 117 149 8.1E-6 T 11-10-2018 IPR001451 Hexapeptide repeat Patl_1259 911f0fa8c863c0948ee8d4af1c2ae50c 344 SUPERFAMILY SSF51161 39 322 6.8E-85 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily Patl_2434 c27e5cae9c55898dbd37d55fd9817b41 425 Gene3D G3DSA:3.90.1580.10 172 340 5.9E-25 T 11-10-2018 Patl_2434 c27e5cae9c55898dbd37d55fd9817b41 425 Gene3D G3DSA:3.90.1580.10 345 425 9.4E-11 T 11-10-2018 Patl_2434 c27e5cae9c55898dbd37d55fd9817b41 425 SUPERFAMILY SSF56436 187 424 3.3E-65 T 11-10-2018 IPR016187 C-type lectin fold Patl_2434 c27e5cae9c55898dbd37d55fd9817b41 425 Pfam PF03781 Sulfatase-modifying factor enzyme 1 187 324 3.2E-22 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Patl_2434 c27e5cae9c55898dbd37d55fd9817b41 425 Pfam PF03781 Sulfatase-modifying factor enzyme 1 347 423 2.1E-8 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 Patl_2434 c27e5cae9c55898dbd37d55fd9817b41 425 Pfam PF12867 DinB superfamily 19 147 1.4E-10 T 11-10-2018 IPR024775 DinB-like domain Patl_2434 c27e5cae9c55898dbd37d55fd9817b41 425 SUPERFAMILY SSF109854 17 147 8.93E-7 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Patl_2434 c27e5cae9c55898dbd37d55fd9817b41 425 Gene3D G3DSA:1.20.120.450 13 160 2.0E-5 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Patl_2434 c27e5cae9c55898dbd37d55fd9817b41 425 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 15 422 1.2E-168 T 11-10-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 Patl_0028 70c651058b31fdd4938a85da28cfb357 187 Pfam PF01300 Telomere recombination 16 179 8.0E-41 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 Patl_0028 70c651058b31fdd4938a85da28cfb357 187 SUPERFAMILY SSF55821 16 183 2.87E-49 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Patl_0028 70c651058b31fdd4938a85da28cfb357 187 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 5 185 37.802 T 11-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 Patl_0028 70c651058b31fdd4938a85da28cfb357 187 Gene3D G3DSA:3.90.870.10 13 185 2.8E-56 T 11-10-2018 Patl_0412 386e25830dfbca27543666e8a2c99931 209 Pfam PF13419 Haloacid dehalogenase-like hydrolase 20 173 1.1E-18 T 11-10-2018 Patl_0412 386e25830dfbca27543666e8a2c99931 209 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 19 176 2.6E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_0412 386e25830dfbca27543666e8a2c99931 209 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 19 170 3.4E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_0412 386e25830dfbca27543666e8a2c99931 209 SUPERFAMILY SSF56784 16 202 1.47E-36 T 11-10-2018 IPR036412 HAD-like superfamily Patl_0412 386e25830dfbca27543666e8a2c99931 209 Gene3D G3DSA:1.10.260.80 29 79 1.3E-55 T 11-10-2018 Patl_0412 386e25830dfbca27543666e8a2c99931 209 Gene3D G3DSA:3.40.50.1000 17 193 1.3E-55 T 11-10-2018 IPR023214 HAD superfamily Patl_4159 ef3253c8b056df4d88a19e380b4e4019 544 Pfam PF00144 Beta-lactamase 50 392 1.0E-72 T 11-10-2018 IPR001466 Beta-lactamase-related Patl_4159 ef3253c8b056df4d88a19e380b4e4019 544 Pfam PF11954 Domain of unknown function (DUF3471) 435 540 8.8E-17 T 11-10-2018 IPR021860 Peptidase S12, Pab87-related, C-terminal Patl_4159 ef3253c8b056df4d88a19e380b4e4019 544 Gene3D G3DSA:3.40.710.10 44 393 7.8E-93 T 11-10-2018 Patl_4159 ef3253c8b056df4d88a19e380b4e4019 544 SUPERFAMILY SSF56601 45 381 2.31E-83 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Patl_0652 7361aa507de7b47d0d396ab666bfeb83 384 SUPERFAMILY SSF109604 103 365 5.02E-21 T 11-10-2018 Patl_0652 7361aa507de7b47d0d396ab666bfeb83 384 Gene3D G3DSA:1.10.3210.10 84 364 2.0E-26 T 11-10-2018 Patl_0652 7361aa507de7b47d0d396ab666bfeb83 384 Pfam PF08668 HDOD domain 103 265 3.2E-14 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Patl_3594 f157fba24e9dee7a0b111f8f163c825c 357 TIGRFAM TIGR03015 pepcterm_ATPase: putative secretion ATPase, PEP-CTERM locus subfamily 1 268 4.1E-106 T 11-10-2018 IPR017466 ATPase, secretion system, PEP-CTERM, predicted Patl_3594 f157fba24e9dee7a0b111f8f163c825c 357 Pfam PF13401 AAA domain 42 170 2.1E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_3594 f157fba24e9dee7a0b111f8f163c825c 357 Gene3D G3DSA:3.40.50.300 27 183 2.3E-11 T 11-10-2018 Patl_3594 f157fba24e9dee7a0b111f8f163c825c 357 SUPERFAMILY SSF52540 5 264 3.67E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3338 21fc6b79e57deaa6a77ce60b41ff4c02 247 ProSitePatterns PS00195 Glutaredoxin active site. 179 195 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Patl_3338 21fc6b79e57deaa6a77ce60b41ff4c02 247 Pfam PF00462 Glutaredoxin 179 235 8.8E-16 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 Patl_3338 21fc6b79e57deaa6a77ce60b41ff4c02 247 Pfam PF08534 Redoxin 9 164 4.7E-32 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Patl_3338 21fc6b79e57deaa6a77ce60b41ff4c02 247 PRINTS PR00160 Glutaredoxin signature 177 195 3.4E-12 T 11-10-2018 IPR014025 Glutaredoxin subgroup Patl_3338 21fc6b79e57deaa6a77ce60b41ff4c02 247 PRINTS PR00160 Glutaredoxin signature 218 231 3.4E-12 T 11-10-2018 IPR014025 Glutaredoxin subgroup Patl_3338 21fc6b79e57deaa6a77ce60b41ff4c02 247 PRINTS PR00160 Glutaredoxin signature 232 245 3.4E-12 T 11-10-2018 IPR014025 Glutaredoxin subgroup Patl_3338 21fc6b79e57deaa6a77ce60b41ff4c02 247 Gene3D G3DSA:3.40.30.10 178 246 5.4E-21 T 11-10-2018 Patl_3338 21fc6b79e57deaa6a77ce60b41ff4c02 247 Gene3D G3DSA:3.40.30.10 8 170 2.9E-62 T 11-10-2018 Patl_3338 21fc6b79e57deaa6a77ce60b41ff4c02 247 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 168 245 1.7E-32 T 11-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 Patl_3338 21fc6b79e57deaa6a77ce60b41ff4c02 247 SUPERFAMILY SSF52833 9 245 2.08E-44 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_1604 ed1d5441557fd705a443208232aa9546 263 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 1.1E-75 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1604 ed1d5441557fd705a443208232aa9546 263 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 36.667 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1604 ed1d5441557fd705a443208232aa9546 263 PIRSF PIRSF001430 1 256 6.7E-83 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1604 ed1d5441557fd705a443208232aa9546 263 Pfam PF01416 tRNA pseudouridine synthase 142 244 9.0E-33 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1604 ed1d5441557fd705a443208232aa9546 263 Pfam PF01416 tRNA pseudouridine synthase 8 102 2.4E-9 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1604 ed1d5441557fd705a443208232aa9546 263 Gene3D G3DSA:3.30.70.580 1 104 4.7E-42 T 11-10-2018 Patl_1604 ed1d5441557fd705a443208232aa9546 263 SUPERFAMILY SSF55120 1 255 3.45E-94 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_1604 ed1d5441557fd705a443208232aa9546 263 Gene3D G3DSA:3.30.70.660 105 242 5.0E-50 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Patl_2334 3d821733e5278c81d63c471435ebe516 128 Gene3D G3DSA:1.10.3990.20 8 116 1.1E-33 T 11-10-2018 IPR038268 Ribbon-helix-helix domain superfamily Patl_2334 3d821733e5278c81d63c471435ebe516 128 Pfam PF13467 Ribbon-helix-helix domain 16 83 2.1E-24 T 11-10-2018 IPR027373 Ribbon-helix-helix domain Patl_4139 d5dbed6046ba8995b9e6dc3b59c5a268 376 Pfam PF05359 Domain of Unknown Function (DUF748) 140 281 3.2E-13 T 11-10-2018 IPR008023 Protein of unknown function DUF748 Patl_2376 de1c0d846d8afc064b07885e3f1287b6 84 Gene3D G3DSA:2.40.50.140 13 77 2.3E-27 T 11-10-2018 Patl_2376 de1c0d846d8afc064b07885e3f1287b6 84 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 13 76 1.2E-36 T 11-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 Patl_2376 de1c0d846d8afc064b07885e3f1287b6 84 PIRSF PIRSF002599 9 82 2.0E-23 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 Patl_2376 de1c0d846d8afc064b07885e3f1287b6 84 Pfam PF00313 'Cold-shock' DNA-binding domain 16 76 5.5E-28 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_2376 de1c0d846d8afc064b07885e3f1287b6 84 SUPERFAMILY SSF50249 12 76 5.78E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold Patl_2376 de1c0d846d8afc064b07885e3f1287b6 84 ProSitePatterns PS00352 'Cold-shock' domain signature. 27 46 - T 11-10-2018 IPR019844 Cold-shock conserved site Patl_2376 de1c0d846d8afc064b07885e3f1287b6 84 SMART SM00357 15 79 2.8E-24 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 Patl_2376 de1c0d846d8afc064b07885e3f1287b6 84 PRINTS PR00050 Cold shock protein signature 52 70 2.1E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_2376 de1c0d846d8afc064b07885e3f1287b6 84 PRINTS PR00050 Cold shock protein signature 16 31 2.1E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_2376 de1c0d846d8afc064b07885e3f1287b6 84 PRINTS PR00050 Cold shock protein signature 37 46 2.1E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Patl_1910 2530089dc3b62675fd32c679202c260f 434 SUPERFAMILY SSF103473 21 427 5.36E-37 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_1910 2530089dc3b62675fd32c679202c260f 434 Gene3D G3DSA:1.20.1250.20 12 429 1.6E-28 T 11-10-2018 Patl_1910 2530089dc3b62675fd32c679202c260f 434 Pfam PF07690 Major Facilitator Superfamily 37 387 2.0E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_2802 c1f79ea9df4e0df0d1bc826abfc1120f 95 SUPERFAMILY SSF160191 3 92 5.75E-37 T 11-10-2018 IPR038068 YcgL-like superfamily Patl_2802 c1f79ea9df4e0df0d1bc826abfc1120f 95 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 4 85 1.0E-42 T 11-10-2018 IPR027354 YcgL domain Patl_2802 c1f79ea9df4e0df0d1bc826abfc1120f 95 Pfam PF05166 YcgL domain 6 78 6.8E-31 T 11-10-2018 IPR027354 YcgL domain Patl_2802 c1f79ea9df4e0df0d1bc826abfc1120f 95 Gene3D G3DSA:3.10.510.20 2 77 1.1E-28 T 11-10-2018 IPR038068 YcgL-like superfamily Patl_2802 c1f79ea9df4e0df0d1bc826abfc1120f 95 Hamap MF_01866 Protein YcgL [ycgL]. 4 91 26.376 T 11-10-2018 IPR027354 YcgL domain Patl_1742 ceae68aa9a147a9e4be1571d59cf73a4 227 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 6 223 5.8E-72 T 11-10-2018 IPR012808 Conserved hypothetical protein CHP02453 Patl_1742 ceae68aa9a147a9e4be1571d59cf73a4 227 PIRSF PIRSF028451 1 227 9.1E-78 T 11-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 Patl_1742 ceae68aa9a147a9e4be1571d59cf73a4 227 Pfam PF09365 Conserved hypothetical protein (DUF2461) 9 218 2.3E-59 T 11-10-2018 IPR012808 Conserved hypothetical protein CHP02453 Patl_0836 69a9d8cde7d354233180461b4e20f475 315 Pfam PF00294 pfkB family carbohydrate kinase 1 297 1.3E-50 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB Patl_0836 69a9d8cde7d354233180461b4e20f475 315 SUPERFAMILY SSF53613 1 296 2.03E-63 T 11-10-2018 IPR029056 Ribokinase-like Patl_0836 69a9d8cde7d354233180461b4e20f475 315 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 252 265 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Patl_0836 69a9d8cde7d354233180461b4e20f475 315 Gene3D G3DSA:3.40.1190.20 1 304 2.9E-67 T 11-10-2018 IPR029056 Ribokinase-like Patl_0932 df3638f7693c3488d353ce0b2b7e241b 840 SUPERFAMILY SSF56935 44 838 8.55E-103 T 11-10-2018 Patl_0932 df3638f7693c3488d353ce0b2b7e241b 840 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 181 2.9E-24 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0932 df3638f7693c3488d353ce0b2b7e241b 840 Pfam PF00593 TonB dependent receptor 310 827 1.5E-42 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0932 df3638f7693c3488d353ce0b2b7e241b 840 Gene3D G3DSA:2.170.130.10 41 185 1.5E-36 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_0309 3b39d661e47ac0081eed4efea9ac9c9d 86 Gene3D G3DSA:3.40.50.360 1 86 1.0E-7 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_0309 3b39d661e47ac0081eed4efea9ac9c9d 86 SUPERFAMILY SSF52218 1 86 2.79E-10 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_0309 3b39d661e47ac0081eed4efea9ac9c9d 86 Pfam PF03358 NADPH-dependent FMN reductase 1 86 9.3E-7 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Patl_2710 23237f5d180e6119b8a0580950b943ee 469 SUPERFAMILY SSF51905 32 468 2.59E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2710 23237f5d180e6119b8a0580950b943ee 469 Pfam PF01593 Flavin containing amine oxidoreductase 43 465 2.2E-55 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Patl_2710 23237f5d180e6119b8a0580950b943ee 469 Gene3D G3DSA:3.50.50.60 29 469 5.9E-80 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2710 23237f5d180e6119b8a0580950b943ee 469 PRINTS PR00757 Flavin-containing amine oxidase signature 35 54 9.9E-8 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Patl_2710 23237f5d180e6119b8a0580950b943ee 469 PRINTS PR00757 Flavin-containing amine oxidase signature 397 416 9.9E-8 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Patl_2710 23237f5d180e6119b8a0580950b943ee 469 PRINTS PR00757 Flavin-containing amine oxidase signature 447 464 9.9E-8 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 Patl_2710 23237f5d180e6119b8a0580950b943ee 469 SUPERFAMILY SSF54373 345 415 1.24E-6 T 11-10-2018 Patl_3522 237ff71c588317ad67fefd0dda691d1e 358 ProSitePatterns PS01348 MraY family signature 2. 187 198 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_3522 237ff71c588317ad67fefd0dda691d1e 358 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 36 358 4.6E-149 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_3522 237ff71c588317ad67fefd0dda691d1e 358 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 23 356 25.314 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_3522 237ff71c588317ad67fefd0dda691d1e 358 Pfam PF00953 Glycosyl transferase family 4 97 281 4.6E-35 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Patl_3522 237ff71c588317ad67fefd0dda691d1e 358 ProSitePatterns PS01347 MraY family signature 1. 66 78 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_3522 237ff71c588317ad67fefd0dda691d1e 358 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 66 78 9.3E-6 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Patl_2892 53a0075882f21af07527826ab8ca1be6 129 SUPERFAMILY SSF161084 4 127 4.58E-29 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily Patl_2892 53a0075882f21af07527826ab8ca1be6 129 Gene3D G3DSA:1.20.120.550 3 129 4.2E-27 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily Patl_2892 53a0075882f21af07527826ab8ca1be6 129 Pfam PF01124 MAPEG family 7 125 6.3E-28 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein Patl_3223 9da4897d1bcb684a3ae6fdb7560899af 260 Gene3D G3DSA:3.40.50.300 4 258 7.7E-61 T 11-10-2018 Patl_3223 9da4897d1bcb684a3ae6fdb7560899af 260 Pfam PF13469 Sulfotransferase family 14 210 3.6E-14 T 11-10-2018 Patl_3223 9da4897d1bcb684a3ae6fdb7560899af 260 SUPERFAMILY SSF52540 11 255 2.32E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2041 ef5edace85dd70c9d6d8b50d63e1ed6a 284 SUPERFAMILY SSF54637 4 112 8.54E-41 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_2041 ef5edace85dd70c9d6d8b50d63e1ed6a 284 Gene3D G3DSA:3.10.129.90 4 283 3.7E-98 T 11-10-2018 Patl_2041 ef5edace85dd70c9d6d8b50d63e1ed6a 284 SUPERFAMILY SSF54637 114 283 7.47E-53 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_2041 ef5edace85dd70c9d6d8b50d63e1ed6a 284 Pfam PF13622 Thioesterase-like superfamily 24 281 4.0E-59 T 11-10-2018 Patl_1955 b5509d7c4e1aae99a277abc85f596c98 52 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 6.0E-17 T 11-10-2018 IPR021677 Protein of unknown function DUF2986 Patl_2911 f8814a6b24f9a2f0bf11b25da49ee187 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 221 1.6E-14 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Patl_2911 f8814a6b24f9a2f0bf11b25da49ee187 297 Gene3D G3DSA:3.40.50.720 2 296 6.3E-72 T 11-10-2018 Patl_2911 f8814a6b24f9a2f0bf11b25da49ee187 297 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 292 1.4E-106 T 11-10-2018 IPR010099 Epimerase family protein SDR39U1 Patl_2911 f8814a6b24f9a2f0bf11b25da49ee187 297 SUPERFAMILY SSF51735 1 293 2.15E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_2911 f8814a6b24f9a2f0bf11b25da49ee187 297 Pfam PF08338 Domain of unknown function (DUF1731) 249 293 1.0E-21 T 11-10-2018 IPR013549 Domain of unknown function DUF1731 Patl_1994 dd85b12290c5da982533a8dcf9195e51 448 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 87 113 4.2E-12 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Patl_1994 dd85b12290c5da982533a8dcf9195e51 448 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 424 444 4.2E-12 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Patl_1994 dd85b12290c5da982533a8dcf9195e51 448 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 12 33 4.2E-12 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Patl_1994 dd85b12290c5da982533a8dcf9195e51 448 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 41 60 4.2E-12 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Patl_1994 dd85b12290c5da982533a8dcf9195e51 448 SUPERFAMILY SSF161070 4 443 1.96E-120 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 Patl_1994 dd85b12290c5da982533a8dcf9195e51 448 Pfam PF00209 Sodium:neurotransmitter symporter family 4 128 5.3E-24 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Patl_1994 dd85b12290c5da982533a8dcf9195e51 448 Pfam PF00209 Sodium:neurotransmitter symporter family 150 443 2.4E-26 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 Patl_2137 aa467758d3222f5d51efef82db9c6cd3 57 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 11 44 1.0E-12 T 11-10-2018 Patl_2137 aa467758d3222f5d51efef82db9c6cd3 57 Pfam PF13617 YnbE-like lipoprotein 3 54 2.3E-25 T 11-10-2018 IPR025985 YnbE-like lipoprotein Patl_1692 825ea02b45cee518ea23ad171ecc4c38 109 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 12 105 2.6E-30 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Patl_1692 825ea02b45cee518ea23ad171ecc4c38 109 Gene3D G3DSA:3.30.1360.20 8 109 8.5E-33 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Patl_1692 825ea02b45cee518ea23ad171ecc4c38 109 SUPERFAMILY SSF55248 10 105 1.24E-30 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Patl_1692 825ea02b45cee518ea23ad171ecc4c38 109 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 10 108 22.583 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Patl_1935 d20d40ee1a88c8477a76c7ac90474b05 612 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 421 605 4.6E-44 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Patl_1935 d20d40ee1a88c8477a76c7ac90474b05 612 SUPERFAMILY SSF53613 20 264 1.43E-56 T 11-10-2018 IPR029056 Ribokinase-like Patl_1935 d20d40ee1a88c8477a76c7ac90474b05 612 Gene3D G3DSA:3.20.20.70 408 611 1.1E-57 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_1935 d20d40ee1a88c8477a76c7ac90474b05 612 Pfam PF02581 Thiamine monophosphate synthase 420 593 2.1E-48 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Patl_1935 d20d40ee1a88c8477a76c7ac90474b05 612 SUPERFAMILY SSF51391 412 609 2.09E-59 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Patl_1935 d20d40ee1a88c8477a76c7ac90474b05 612 Gene3D G3DSA:3.40.1190.20 6 291 4.2E-72 T 11-10-2018 IPR029056 Ribokinase-like Patl_1935 d20d40ee1a88c8477a76c7ac90474b05 612 Pfam PF08543 Phosphomethylpyrimidine kinase 29 265 2.4E-61 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Patl_0174 2654592a5943dde7f842c28faa3d886f 405 Pfam PF00482 Type II secretion system (T2SS), protein F 70 193 7.9E-28 T 11-10-2018 IPR018076 Type II secretion system F domain Patl_0174 2654592a5943dde7f842c28faa3d886f 405 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 1.8E-29 T 11-10-2018 IPR018076 Type II secretion system F domain Patl_0174 2654592a5943dde7f842c28faa3d886f 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 2.7E-10 T 11-10-2018 IPR003004 GspF/PilC family Patl_0174 2654592a5943dde7f842c28faa3d886f 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 2.7E-10 T 11-10-2018 IPR003004 GspF/PilC family Patl_0174 2654592a5943dde7f842c28faa3d886f 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 2.7E-10 T 11-10-2018 IPR003004 GspF/PilC family Patl_0174 2654592a5943dde7f842c28faa3d886f 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 2.7E-10 T 11-10-2018 IPR003004 GspF/PilC family Patl_0174 2654592a5943dde7f842c28faa3d886f 405 Gene3D G3DSA:1.20.81.30 256 368 1.3E-28 T 11-10-2018 Patl_0174 2654592a5943dde7f842c28faa3d886f 405 Gene3D G3DSA:1.20.81.30 57 173 3.3E-29 T 11-10-2018 Patl_3737 1c6761acf3b3f3724d588e7e5fdc891e 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 4.0E-19 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3737 1c6761acf3b3f3724d588e7e5fdc891e 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 9.9E-43 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3737 1c6761acf3b3f3724d588e7e5fdc891e 85 SUPERFAMILY SSF110324 2 82 2.2E-33 T 11-10-2018 Patl_3737 1c6761acf3b3f3724d588e7e5fdc891e 85 Gene3D G3DSA:2.40.50.100 21 85 2.2E-30 T 11-10-2018 Patl_3737 1c6761acf3b3f3724d588e7e5fdc891e 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_3737 1c6761acf3b3f3724d588e7e5fdc891e 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.718 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3737 1c6761acf3b3f3724d588e7e5fdc891e 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.9E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3737 1c6761acf3b3f3724d588e7e5fdc891e 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.3E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3737 1c6761acf3b3f3724d588e7e5fdc891e 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.3E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3737 1c6761acf3b3f3724d588e7e5fdc891e 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.3E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3885 61ec3dde79a0cfed0b3a705843cb7041 279 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 272 6.5E-86 T 11-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 Patl_3885 61ec3dde79a0cfed0b3a705843cb7041 279 Gene3D G3DSA:3.40.830.10 1 279 8.8E-94 T 11-10-2018 Patl_3885 61ec3dde79a0cfed0b3a705843cb7041 279 SUPERFAMILY SSF53213 2 277 1.26E-95 T 11-10-2018 Patl_1425 9c94c08dd8eefb09301869231c650d79 364 Gene3D G3DSA:3.20.20.70 1 363 2.0E-124 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_1425 9c94c08dd8eefb09301869231c650d79 364 SUPERFAMILY SSF51395 1 359 4.89E-107 T 11-10-2018 Patl_1425 9c94c08dd8eefb09301869231c650d79 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 1 334 2.6E-75 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Patl_0281 653f3c7d141d95a9dea1b965ef4e2a01 71 Pfam PF09493 Tryptophan-rich protein (DUF2389) 12 71 1.3E-21 T 11-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich Patl_0281 653f3c7d141d95a9dea1b965ef4e2a01 71 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 10 71 2.9E-21 T 11-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich Patl_3617 a5a801ccb6fab337220eb22a2cecde01 285 Pfam PF09916 Uncharacterized protein conserved in bacteria (DUF2145) 51 249 1.2E-61 T 11-10-2018 IPR014547 Uncharacterised conserved protein UCP028477 Patl_2475 a5cc763fe7ce2c667e938335ea3b97eb 90 SUPERFAMILY SSF54292 24 89 8.35E-17 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Patl_2475 a5cc763fe7ce2c667e938335ea3b97eb 90 Gene3D G3DSA:3.10.20.30 3 90 3.3E-13 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_2475 a5cc763fe7ce2c667e938335ea3b97eb 90 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 24 82 3.3E-7 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Patl_2475 a5cc763fe7ce2c667e938335ea3b97eb 90 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 43 51 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Patl_1860 7a3a4ebadde87b4f6f950e8a1507c267 285 TIGRFAM TIGR03864 PQQ_ABC_ATP: ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system 30 279 6.8E-107 T 11-10-2018 IPR022467 ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system Patl_1860 7a3a4ebadde87b4f6f950e8a1507c267 285 SUPERFAMILY SSF52540 34 257 9.65E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1860 7a3a4ebadde87b4f6f950e8a1507c267 285 Gene3D G3DSA:3.40.50.300 18 284 3.4E-57 T 11-10-2018 Patl_1860 7a3a4ebadde87b4f6f950e8a1507c267 285 SMART SM00382 54 251 3.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_1860 7a3a4ebadde87b4f6f950e8a1507c267 285 Pfam PF00005 ABC transporter 47 203 2.4E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_3256 c416fc21f9e2c88159081133b2ae9eac 178 SUPERFAMILY SSF52540 3 167 7.72E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3256 c416fc21f9e2c88159081133b2ae9eac 178 Pfam PF00005 ABC transporter 4 130 3.3E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_3256 c416fc21f9e2c88159081133b2ae9eac 178 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 174 2.3E-56 T 11-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 Patl_3256 c416fc21f9e2c88159081133b2ae9eac 178 Gene3D G3DSA:3.40.50.300 1 174 5.6E-34 T 11-10-2018 Patl_0129 1391bbd9a2a79a4108b313dcb644bee6 596 Gene3D G3DSA:1.20.1730.10 24 515 1.3E-81 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Patl_0129 1391bbd9a2a79a4108b313dcb644bee6 596 Pfam PF00474 Sodium:solute symporter family 36 461 9.1E-35 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_1597 8b0f8f50559d3743c1780952de4d3e03 528 Gene3D G3DSA:1.10.3720.10 263 526 8.5E-31 T 11-10-2018 IPR035906 MetI-like superfamily Patl_1597 8b0f8f50559d3743c1780952de4d3e03 528 Gene3D G3DSA:1.10.3720.10 1 245 2.8E-49 T 11-10-2018 IPR035906 MetI-like superfamily Patl_1597 8b0f8f50559d3743c1780952de4d3e03 528 SUPERFAMILY SSF161098 265 515 7.01E-36 T 11-10-2018 IPR035906 MetI-like superfamily Patl_1597 8b0f8f50559d3743c1780952de4d3e03 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 48 244 8.4E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Patl_1597 8b0f8f50559d3743c1780952de4d3e03 528 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 344 518 2.1E-8 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Patl_1597 8b0f8f50559d3743c1780952de4d3e03 528 SUPERFAMILY SSF161098 2 236 4.58E-39 T 11-10-2018 IPR035906 MetI-like superfamily Patl_3789 950b6ba7d138b3e847b1726e64ce3a6f 167 SMART SM00769 41 160 1.8E-13 T 11-10-2018 IPR013990 Water stress and hypersensitive response domain GO:0009269 Patl_3789 950b6ba7d138b3e847b1726e64ce3a6f 167 Gene3D G3DSA:2.60.40.1820 25 163 5.7E-9 T 11-10-2018 Patl_3789 950b6ba7d138b3e847b1726e64ce3a6f 167 SUPERFAMILY SSF117070 17 161 1.7E-28 T 11-10-2018 Patl_3789 950b6ba7d138b3e847b1726e64ce3a6f 167 Pfam PF03168 Late embryogenesis abundant protein 61 152 2.1E-15 T 11-10-2018 IPR004864 Late embryogenesis abundant protein, LEA_2 subgroup Patl_0954 36fb7a51253168391b6dfd5c94d731b1 199 Pfam PF01471 Putative peptidoglycan binding domain 142 190 6.3E-8 T 11-10-2018 IPR002477 Peptidoglycan binding-like Patl_0954 36fb7a51253168391b6dfd5c94d731b1 199 SUPERFAMILY SSF47090 142 194 3.45E-10 T 11-10-2018 IPR036365 PGBD-like superfamily Patl_0954 36fb7a51253168391b6dfd5c94d731b1 199 Gene3D G3DSA:1.10.101.10 139 197 1.6E-6 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Patl_2007 98e6d14615693866fd5905882699dd0b 565 Pfam PF11949 Protein of unknown function (DUF3466) 8 562 4.4E-111 T 11-10-2018 IPR022562 Protein of unknown function DUF3466 Patl_3908 da1b6e5d2b294b87fb07d36bf7369c99 107 SUPERFAMILY SSF46626 29 106 2.15E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_3908 da1b6e5d2b294b87fb07d36bf7369c99 107 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 34 102 3.3E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_3908 da1b6e5d2b294b87fb07d36bf7369c99 107 Gene3D G3DSA:1.10.760.10 29 107 4.8E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_0965 2c7416cb984a9cfa30763cc8f7dcdde7 82 Pfam PF13499 EF-hand domain pair 14 75 5.6E-11 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 Patl_0965 2c7416cb984a9cfa30763cc8f7dcdde7 82 SUPERFAMILY SSF47473 6 77 7.39E-18 T 11-10-2018 IPR011992 EF-hand domain pair Patl_0965 2c7416cb984a9cfa30763cc8f7dcdde7 82 SMART SM00054 14 42 0.0084 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 Patl_0965 2c7416cb984a9cfa30763cc8f7dcdde7 82 SMART SM00054 50 78 0.0037 T 11-10-2018 IPR002048 EF-hand domain GO:0005509 Patl_0965 2c7416cb984a9cfa30763cc8f7dcdde7 82 ProSitePatterns PS00018 EF-hand calcium-binding domain. 23 35 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Patl_0965 2c7416cb984a9cfa30763cc8f7dcdde7 82 ProSitePatterns PS00018 EF-hand calcium-binding domain. 59 71 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Patl_0965 2c7416cb984a9cfa30763cc8f7dcdde7 82 Gene3D G3DSA:1.10.238.10 1 81 1.4E-17 T 11-10-2018 Patl_1785 ba9bd6e122986c5143ab24ba0675d63a 592 Gene3D G3DSA:1.25.40.10 54 261 1.6E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1785 ba9bd6e122986c5143ab24ba0675d63a 592 SUPERFAMILY SSF55073 446 561 6.98E-19 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_1785 ba9bd6e122986c5143ab24ba0675d63a 592 Gene3D G3DSA:3.30.70.270 434 588 2.7E-23 T 11-10-2018 Patl_1785 ba9bd6e122986c5143ab24ba0675d63a 592 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 442 580 8.3E-16 T 11-10-2018 IPR000160 GGDEF domain Patl_1785 ba9bd6e122986c5143ab24ba0675d63a 592 SMART SM00267 430 590 1.3E-5 T 11-10-2018 IPR000160 GGDEF domain Patl_1785 ba9bd6e122986c5143ab24ba0675d63a 592 Pfam PF00990 Diguanylate cyclase, GGDEF domain 442 581 8.1E-16 T 11-10-2018 IPR000160 GGDEF domain Patl_1171 03558c57402821ee32a0f1a30b597c67 470 Pfam PF02397 Bacterial sugar transferase 283 465 7.1E-62 T 11-10-2018 IPR003362 Bacterial sugar transferase Patl_1171 03558c57402821ee32a0f1a30b597c67 470 TIGRFAM TIGR03013 EpsB_2: sugar transferase, PEP-CTERM system associated 22 469 8.9E-161 T 11-10-2018 IPR017464 Sugar transferase, PEP-CTERM system associated Patl_1171 03558c57402821ee32a0f1a30b597c67 470 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 22 469 8.2E-109 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Patl_1171 03558c57402821ee32a0f1a30b597c67 470 Gene3D G3DSA:3.40.50.720 140 258 5.2E-8 T 11-10-2018 Patl_3043 fbea621047d35f757db8d04d58016aa7 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 144 4.3E-22 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Patl_3043 fbea621047d35f757db8d04d58016aa7 146 Pfam PF02050 Flagellar FliJ protein 20 142 6.1E-27 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Patl_0442 75eceb76b3f1865007a235b17fd54595 327 Gene3D G3DSA:3.30.930.10 4 327 3.6E-109 T 11-10-2018 Patl_0442 75eceb76b3f1865007a235b17fd54595 327 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 18 322 6.8E-132 T 11-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 Patl_0442 75eceb76b3f1865007a235b17fd54595 327 Pfam PF00152 tRNA synthetases class II (D, K and N) 16 322 1.7E-44 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_0442 75eceb76b3f1865007a235b17fd54595 327 SUPERFAMILY SSF55681 16 322 2.79E-78 T 11-10-2018 Patl_4097 2d7081285abfaeef5b30dd47a899ee3a 596 Gene3D G3DSA:3.30.420.40 360 534 1.8E-10 T 11-10-2018 Patl_4097 2d7081285abfaeef5b30dd47a899ee3a 596 Gene3D G3DSA:3.90.640.10 406 481 1.8E-10 T 11-10-2018 Patl_4097 2d7081285abfaeef5b30dd47a899ee3a 596 Pfam PF06723 MreB/Mbl protein 344 536 1.8E-6 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Patl_4097 2d7081285abfaeef5b30dd47a899ee3a 596 SUPERFAMILY SSF53067 363 538 1.81E-14 T 11-10-2018 Patl_4097 2d7081285abfaeef5b30dd47a899ee3a 596 Gene3D G3DSA:3.30.420.40 342 359 1.8E-10 T 11-10-2018 Patl_3167 676aea8b3726f11cdd9a046ed9a0f566 153 SUPERFAMILY SSF54523 2 61 7.85E-5 T 11-10-2018 Patl_3167 676aea8b3726f11cdd9a046ed9a0f566 153 Gene3D G3DSA:3.55.40.10 15 146 1.2E-6 T 11-10-2018 Patl_3167 676aea8b3726f11cdd9a046ed9a0f566 153 Pfam PF12019 Type II transport protein GspH 24 136 2.4E-5 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 Patl_3103 92a5465b6a480aa4bfa8b8aad9779116 236 SMART SM00858 114 176 1.3E-9 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Patl_3103 92a5465b6a480aa4bfa8b8aad9779116 236 Gene3D G3DSA:2.30.30.760 178 236 1.3E-10 T 11-10-2018 Patl_3103 92a5465b6a480aa4bfa8b8aad9779116 236 Pfam PF13144 Chaperone for flagella basal body P-ring formation 41 234 4.6E-42 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Patl_3103 92a5465b6a480aa4bfa8b8aad9779116 236 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 102 234 5.8E-36 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal Patl_1659 f2a2cfbeb48013b49fff76e2d2d2b905 343 Pfam PF00092 von Willebrand factor type A domain 88 280 1.1E-28 T 11-10-2018 IPR002035 von Willebrand factor, type A Patl_1659 f2a2cfbeb48013b49fff76e2d2d2b905 343 SMART SM00327 86 287 2.6E-21 T 11-10-2018 IPR002035 von Willebrand factor, type A Patl_1659 f2a2cfbeb48013b49fff76e2d2d2b905 343 Gene3D G3DSA:3.40.50.410 86 287 3.8E-55 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Patl_1659 f2a2cfbeb48013b49fff76e2d2d2b905 343 SUPERFAMILY SSF53300 83 265 3.41E-39 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Patl_2919 0dc53ba2618ae18d5f6f5e27c0ce0ef3 469 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 304 3.1E-111 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Patl_2919 0dc53ba2618ae18d5f6f5e27c0ce0ef3 469 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Patl_2919 0dc53ba2618ae18d5f6f5e27c0ce0ef3 469 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 460 1.5E-188 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Patl_2919 0dc53ba2618ae18d5f6f5e27c0ce0ef3 469 Gene3D G3DSA:3.40.50.620 2 313 1.7E-135 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_2919 0dc53ba2618ae18d5f6f5e27c0ce0ef3 469 SUPERFAMILY SSF52374 4 297 9.12E-114 T 11-10-2018 Patl_2919 0dc53ba2618ae18d5f6f5e27c0ce0ef3 469 SUPERFAMILY SSF48163 298 460 1.29E-44 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Patl_2919 0dc53ba2618ae18d5f6f5e27c0ce0ef3 469 Gene3D G3DSA:1.10.10.350 366 467 9.3E-22 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Patl_2919 0dc53ba2618ae18d5f6f5e27c0ce0ef3 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 2.2E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Patl_2919 0dc53ba2618ae18d5f6f5e27c0ce0ef3 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 2.2E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Patl_2919 0dc53ba2618ae18d5f6f5e27c0ce0ef3 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 2.2E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Patl_2919 0dc53ba2618ae18d5f6f5e27c0ce0ef3 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 178 188 2.2E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Patl_2919 0dc53ba2618ae18d5f6f5e27c0ce0ef3 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 202 2.2E-27 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Patl_2919 0dc53ba2618ae18d5f6f5e27c0ce0ef3 469 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 460 32.291 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Patl_4175 b57653beb641a340961ab6a557bb7f62 446 Gene3D G3DSA:1.20.1250.20 239 444 9.0E-38 T 11-10-2018 Patl_4175 b57653beb641a340961ab6a557bb7f62 446 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 95 435 1.1E-67 T 11-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 Patl_4175 b57653beb641a340961ab6a557bb7f62 446 Pfam PF07690 Major Facilitator Superfamily 18 381 3.6E-11 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_4175 b57653beb641a340961ab6a557bb7f62 446 SUPERFAMILY SSF103473 15 440 1.83E-26 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_4175 b57653beb641a340961ab6a557bb7f62 446 Gene3D G3DSA:1.20.1250.20 9 225 1.9E-44 T 11-10-2018 Patl_2674 803464807859224246f773c0e53e38da 302 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 11 157 4.7E-19 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 Patl_2674 803464807859224246f773c0e53e38da 302 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 139 10.995 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Patl_2674 803464807859224246f773c0e53e38da 302 Pfam PF00430 ATP synthase B/B' CF(0) 8 127 1.8E-15 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Patl_2674 803464807859224246f773c0e53e38da 302 TIGRFAM TIGR03321 alt_F1F0_F0_B: alternate F1F0 ATPase, F0 subunit B 1 266 1.7E-107 T 11-10-2018 IPR017707 Alternate ATP synthase, F0 complex, subunit b Patl_1907 e9389b61ffb3f48b2f215f2754c9e27e 109 SUPERFAMILY SSF52833 19 108 3.08E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_1907 e9389b61ffb3f48b2f215f2754c9e27e 109 Pfam PF00085 Thioredoxin 20 108 2.9E-15 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 Patl_1907 e9389b61ffb3f48b2f215f2754c9e27e 109 Gene3D G3DSA:3.40.30.10 9 109 5.2E-23 T 11-10-2018 Patl_4085 2e13be3bb072361e276b4316d933a57c 131 Pfam PF09945 Predicted membrane protein (DUF2177) 5 126 1.1E-41 T 11-10-2018 IPR018687 Protein of unknown function DUF2177, membrane Patl_1065 f799edfb333befd3833f4486fe772f92 447 Pfam PF13432 Tetratricopeptide repeat 63 128 0.013 T 11-10-2018 Patl_1065 f799edfb333befd3833f4486fe772f92 447 Pfam PF13432 Tetratricopeptide repeat 357 415 0.0076 T 11-10-2018 Patl_1065 f799edfb333befd3833f4486fe772f92 447 Gene3D G3DSA:1.25.40.10 56 134 6.2E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1065 f799edfb333befd3833f4486fe772f92 447 SUPERFAMILY SSF48452 95 220 1.96E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1065 f799edfb333befd3833f4486fe772f92 447 SUPERFAMILY SSF81901 179 420 3.14E-13 T 11-10-2018 Patl_1065 f799edfb333befd3833f4486fe772f92 447 Gene3D G3DSA:1.25.40.10 284 419 6.3E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1065 f799edfb333befd3833f4486fe772f92 447 Pfam PF13181 Tetratricopeptide repeat 176 205 0.073 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1065 f799edfb333befd3833f4486fe772f92 447 Gene3D G3DSA:1.25.40.10 135 278 1.6E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1065 f799edfb333befd3833f4486fe772f92 447 SMART SM00028 388 421 63.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1065 f799edfb333befd3833f4486fe772f92 447 SMART SM00028 58 91 330.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1065 f799edfb333befd3833f4486fe772f92 447 SMART SM00028 97 130 2.9 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1065 f799edfb333befd3833f4486fe772f92 447 SMART SM00028 176 209 28.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_1065 f799edfb333befd3833f4486fe772f92 447 SMART SM00028 135 168 80.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Patl_0824 26c19832b0f17bef496cd591392aeec4 454 Pfam PF00722 Glycosyl hydrolases family 16 88 267 5.2E-14 T 11-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 Patl_0824 26c19832b0f17bef496cd591392aeec4 454 SUPERFAMILY SSF49899 38 310 3.3E-45 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Patl_0824 26c19832b0f17bef496cd591392aeec4 454 Gene3D G3DSA:2.60.120.260 315 451 3.5E-8 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0824 26c19832b0f17bef496cd591392aeec4 454 Gene3D G3DSA:2.60.120.200 35 311 2.1E-59 T 11-10-2018 Patl_3685 b2516adc15461a2d3827a45368105e25 527 Pfam PF04820 Tryptophan halogenase 26 479 4.2E-122 T 11-10-2018 IPR006905 Flavin-dependent halogenase Patl_3685 b2516adc15461a2d3827a45368105e25 527 PIRSF PIRSF011396 19 525 6.9E-163 T 11-10-2018 IPR033856 Flavin-dependent tryptophan halogenase Patl_3685 b2516adc15461a2d3827a45368105e25 527 Gene3D G3DSA:3.50.50.60 20 523 4.1E-181 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3685 b2516adc15461a2d3827a45368105e25 527 SUPERFAMILY SSF51905 25 446 2.87E-32 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1732 0bca5040eb96716fd8d882dfcdc6ee48 53 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 53 21.195 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Patl_1732 0bca5040eb96716fd8d882dfcdc6ee48 53 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 8.9E-16 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Patl_1732 0bca5040eb96716fd8d882dfcdc6ee48 53 PIRSF PIRSF036466 1 53 1.5E-23 T 11-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 Patl_0289 00e95cffb0d5ff99c10e1393eab89d66 590 Pfam PF00474 Sodium:solute symporter family 33 424 4.2E-33 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_0289 00e95cffb0d5ff99c10e1393eab89d66 590 Gene3D G3DSA:1.20.1730.10 21 503 9.1E-82 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Patl_1704 2dc28ea5821b6d9d9c6d34b044dcc7f6 554 Pfam PF02470 MlaD protein 294 390 8.9E-11 T 11-10-2018 IPR003399 Mce/MlaD Patl_1704 2dc28ea5821b6d9d9c6d34b044dcc7f6 554 Pfam PF02470 MlaD protein 44 131 1.2E-11 T 11-10-2018 IPR003399 Mce/MlaD Patl_3824 070bf848ebcd322e388dfc6ea952527c 224 SUPERFAMILY SSF47616 78 215 2.27E-21 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Patl_3824 070bf848ebcd322e388dfc6ea952527c 224 Gene3D G3DSA:1.20.1050.10 84 224 3.7E-50 T 11-10-2018 Patl_3824 070bf848ebcd322e388dfc6ea952527c 224 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 81 1.2E-17 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Patl_3824 070bf848ebcd322e388dfc6ea952527c 224 Gene3D G3DSA:3.40.30.10 4 83 3.2E-27 T 11-10-2018 Patl_3824 070bf848ebcd322e388dfc6ea952527c 224 SUPERFAMILY SSF52833 5 101 3.08E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_3959 63f80d0d67baa0ee0d715695d5b15d1d 480 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 20 450 1.4E-142 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 Patl_3959 63f80d0d67baa0ee0d715695d5b15d1d 480 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 466 40.231 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 Patl_3096 1af225e68df62db8e5b50e79a635c383 247 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 5.9E-31 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Patl_3096 1af225e68df62db8e5b50e79a635c383 247 SUPERFAMILY SSF117143 78 205 1.57E-18 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Patl_3096 1af225e68df62db8e5b50e79a635c383 247 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 243 7.8E-24 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Patl_3297 3ade405ebda1fd2a1a4267c2fec45589 374 SUPERFAMILY SSF53901 3 373 1.57E-51 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_3297 3ade405ebda1fd2a1a4267c2fec45589 374 Gene3D G3DSA:3.40.47.10 1 215 6.8E-53 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_3297 3ade405ebda1fd2a1a4267c2fec45589 374 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 151 219 1.6E-17 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Patl_3297 3ade405ebda1fd2a1a4267c2fec45589 374 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 283 372 1.5E-21 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Patl_3297 3ade405ebda1fd2a1a4267c2fec45589 374 Gene3D G3DSA:3.40.47.10 219 374 8.6E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 Patl_3634 ae099febbd1d8ff1691453b35672956c 334 Pfam PF01926 50S ribosome-binding GTPase 118 176 4.9E-13 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 Patl_3634 ae099febbd1d8ff1691453b35672956c 334 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 272 1.7E-103 T 11-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis Patl_3634 ae099febbd1d8ff1691453b35672956c 334 Gene3D G3DSA:1.10.1580.10 174 266 3.4E-25 T 11-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily Patl_3634 ae099febbd1d8ff1691453b35672956c 334 Gene3D G3DSA:3.40.50.300 3 171 1.2E-38 T 11-10-2018 Patl_3634 ae099febbd1d8ff1691453b35672956c 334 PIRSF PIRSF006230 273 334 150.0 T 11-10-2018 IPR016478 GTPase, MTG1 Patl_3634 ae099febbd1d8ff1691453b35672956c 334 PIRSF PIRSF006230 1 277 1.7E-99 T 11-10-2018 IPR016478 GTPase, MTG1 Patl_3634 ae099febbd1d8ff1691453b35672956c 334 SUPERFAMILY SSF52540 9 177 4.14E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2325 c18087e1a9ac94b145f2ed85c611b0fb 489 Pfam PF00474 Sodium:solute symporter family 38 417 2.1E-36 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_2325 c18087e1a9ac94b145f2ed85c611b0fb 489 Gene3D G3DSA:1.20.1730.10 27 487 8.9E-71 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Patl_0361 4327a562cbc0c40ec0ef2569e77fc885 197 Pfam PF00765 Autoinducer synthase 19 189 1.5E-33 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Patl_0361 4327a562cbc0c40ec0ef2569e77fc885 197 SUPERFAMILY SSF55729 16 186 9.79E-33 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_0361 4327a562cbc0c40ec0ef2569e77fc885 197 PRINTS PR01549 Autoinducer synthesis protein signature 67 85 2.2E-22 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Patl_0361 4327a562cbc0c40ec0ef2569e77fc885 197 PRINTS PR01549 Autoinducer synthesis protein signature 23 42 2.2E-22 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Patl_0361 4327a562cbc0c40ec0ef2569e77fc885 197 PRINTS PR01549 Autoinducer synthesis protein signature 125 146 2.2E-22 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Patl_0361 4327a562cbc0c40ec0ef2569e77fc885 197 PRINTS PR01549 Autoinducer synthesis protein signature 171 188 2.2E-22 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Patl_0361 4327a562cbc0c40ec0ef2569e77fc885 197 PRINTS PR01549 Autoinducer synthesis protein signature 100 112 2.2E-22 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Patl_0361 4327a562cbc0c40ec0ef2569e77fc885 197 PRINTS PR01549 Autoinducer synthesis protein signature 43 65 2.2E-22 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Patl_0361 4327a562cbc0c40ec0ef2569e77fc885 197 PRINTS PR01549 Autoinducer synthesis protein signature 147 168 2.2E-22 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Patl_0361 4327a562cbc0c40ec0ef2569e77fc885 197 ProSitePatterns PS00949 Autoinducer synthase family signature. 27 52 - T 11-10-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 Patl_0361 4327a562cbc0c40ec0ef2569e77fc885 197 Gene3D G3DSA:3.40.630.30 10 195 9.4E-49 T 11-10-2018 Patl_4069 386188d6e8f68bfff995b00490a95978 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 1.1E-26 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Patl_4069 386188d6e8f68bfff995b00490a95978 135 Gene3D G3DSA:3.30.420.270 63 131 3.7E-7 T 11-10-2018 Patl_3457 023d321c7a2346c542e8b8eea5528453 390 Pfam PF01150 GDA1/CD39 (nucleoside phosphatase) family 12 318 1.4E-17 T 11-10-2018 IPR000407 Nucleoside phosphatase GDA1/CD39 GO:0016787 Reactome: R-HSA-8850843 Patl_3457 023d321c7a2346c542e8b8eea5528453 390 Gene3D G3DSA:3.30.420.150 146 356 3.3E-34 T 11-10-2018 Patl_3457 023d321c7a2346c542e8b8eea5528453 390 Gene3D G3DSA:3.30.420.40 14 363 3.3E-34 T 11-10-2018 Patl_3686 1cd0e87c500e5479cf6b59d7abe4e3a1 919 Gene3D G3DSA:2.170.130.10 45 163 6.1E-14 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_3686 1cd0e87c500e5479cf6b59d7abe4e3a1 919 SUPERFAMILY SSF56935 27 919 1.69E-77 T 11-10-2018 Patl_3686 1cd0e87c500e5479cf6b59d7abe4e3a1 919 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 37 919 1.7E-186 T 11-10-2018 IPR010104 Bacterial TonB-dependent receptor Patl_3686 1cd0e87c500e5479cf6b59d7abe4e3a1 919 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 158 1.3E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3686 1cd0e87c500e5479cf6b59d7abe4e3a1 919 Pfam PF00593 TonB dependent receptor 397 916 2.9E-27 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0941 fdf65963a7f79433434e03a8bcebc833 412 SUPERFAMILY SSF51556 32 407 2.1E-88 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_0941 fdf65963a7f79433434e03a8bcebc833 412 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 37 399 3.9E-95 T 11-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 Patl_0941 fdf65963a7f79433434e03a8bcebc833 412 Gene3D G3DSA:3.20.20.140 32 409 8.6E-128 T 11-10-2018 Patl_2800 f4c7eb9fa7da0cd398cc95420c53dcfe 219 SUPERFAMILY SSF56529 13 217 4.45E-59 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Patl_2800 f4c7eb9fa7da0cd398cc95420c53dcfe 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 217 4.8E-46 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Patl_2800 f4c7eb9fa7da0cd398cc95420c53dcfe 219 Gene3D G3DSA:3.90.850.10 2 219 3.5E-64 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Patl_2565 69367afcb5c416d00979264acc182152 218 Pfam PF03550 Outer membrane lipoprotein LolB 60 215 4.0E-40 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Patl_2565 69367afcb5c416d00979264acc182152 218 SUPERFAMILY SSF89392 36 216 7.45E-39 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Patl_2565 69367afcb5c416d00979264acc182152 218 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 23 216 5.8E-31 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Patl_2565 69367afcb5c416d00979264acc182152 218 Gene3D G3DSA:2.50.20.10 41 217 2.9E-47 T 11-10-2018 Patl_2565 69367afcb5c416d00979264acc182152 218 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 20 217 20.1 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 Patl_0940 1f20b69da931bcc6cfaa7be5d121bf63 780 ProSitePatterns PS00018 EF-hand calcium-binding domain. 297 309 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Patl_0940 1f20b69da931bcc6cfaa7be5d121bf63 780 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 159 2.8E-6 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0940 1f20b69da931bcc6cfaa7be5d121bf63 780 Gene3D G3DSA:2.170.130.10 32 160 2.1E-5 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_0940 1f20b69da931bcc6cfaa7be5d121bf63 780 SUPERFAMILY SSF56935 37 780 4.09E-76 T 11-10-2018 Patl_0940 1f20b69da931bcc6cfaa7be5d121bf63 780 Pfam PF00593 TonB dependent receptor 296 778 3.1E-39 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_2344 3a89bec96e72838458394c87aadc9881 421 Gene3D G3DSA:1.10.150.20 172 230 2.3E-8 T 11-10-2018 Patl_2344 3a89bec96e72838458394c87aadc9881 421 Pfam PF11798 IMS family HHH motif 172 202 1.3E-5 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Patl_2344 3a89bec96e72838458394c87aadc9881 421 Pfam PF00817 impB/mucB/samB family 6 153 1.1E-27 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Patl_2344 3a89bec96e72838458394c87aadc9881 421 Pfam PF13438 Domain of unknown function (DUF4113) 370 419 7.3E-22 T 11-10-2018 IPR025188 Domain of unknown function DUF4113 Patl_2344 3a89bec96e72838458394c87aadc9881 421 Gene3D G3DSA:3.30.70.270 4 157 3.8E-34 T 11-10-2018 Patl_2344 3a89bec96e72838458394c87aadc9881 421 Gene3D G3DSA:2.30.40.20 10 74 3.8E-34 T 11-10-2018 Patl_2344 3a89bec96e72838458394c87aadc9881 421 SUPERFAMILY SSF56672 1 237 6.23E-60 T 11-10-2018 Patl_2344 3a89bec96e72838458394c87aadc9881 421 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 354 6.7E-10 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Patl_0657 d707daba8aa8281bb339052317ec8598 337 SUPERFAMILY SSF46689 285 334 9.26E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0657 d707daba8aa8281bb339052317ec8598 337 Pfam PF12833 Helix-turn-helix domain 256 333 6.2E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_0657 d707daba8aa8281bb339052317ec8598 337 SMART SM00342 250 332 8.5E-22 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_0657 d707daba8aa8281bb339052317ec8598 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 316 3.7E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Patl_0657 d707daba8aa8281bb339052317ec8598 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 316 332 3.7E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Patl_0657 d707daba8aa8281bb339052317ec8598 337 Gene3D G3DSA:1.10.10.60 230 336 1.4E-23 T 11-10-2018 Patl_0657 d707daba8aa8281bb339052317ec8598 337 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 24 206 4.5E-36 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal Patl_0113 6c43cb4f180eb8b26dc1a5ef237ff0cf 189 Gene3D G3DSA:3.40.630.30 1 154 1.3E-42 T 11-10-2018 Patl_0113 6c43cb4f180eb8b26dc1a5ef237ff0cf 189 Pfam PF13302 Acetyltransferase (GNAT) domain 9 149 2.2E-33 T 11-10-2018 IPR000182 GNAT domain Patl_0113 6c43cb4f180eb8b26dc1a5ef237ff0cf 189 SUPERFAMILY SSF55729 3 150 1.38E-39 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_3561 1a9b1c4bb07df8dfbbc4133c9137f515 368 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 350 2.7E-124 T 11-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 Patl_3561 1a9b1c4bb07df8dfbbc4133c9137f515 368 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 350 1.1E-70 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 Patl_1085 26804529140ed4dc11e05245a10ad716 356 SUPERFAMILY SSF53756 14 352 9.81E-44 T 11-10-2018 Patl_1085 26804529140ed4dc11e05245a10ad716 356 Pfam PF00534 Glycosyl transferases group 1 182 330 3.8E-22 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Patl_1085 26804529140ed4dc11e05245a10ad716 356 Gene3D G3DSA:3.40.50.2000 183 334 1.7E-27 T 11-10-2018 Patl_1085 26804529140ed4dc11e05245a10ad716 356 Gene3D G3DSA:3.40.50.2000 2 182 1.3E-7 T 11-10-2018 Patl_1450 a6bbb50250fbaa63f071c341ff6970bd 115 SUPERFAMILY SSF54593 8 112 5.07E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_1450 a6bbb50250fbaa63f071c341ff6970bd 115 Gene3D G3DSA:3.10.180.10 4 115 9.2E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_1587 94a99dc81dfed03003c2498dd756ec77 363 Pfam PF00793 DAHP synthetase I family 41 340 5.4E-96 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Patl_1587 94a99dc81dfed03003c2498dd756ec77 363 PIRSF PIRSF001361 1 354 2.5E-153 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Patl_1587 94a99dc81dfed03003c2498dd756ec77 363 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 348 4.6E-150 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Patl_1587 94a99dc81dfed03003c2498dd756ec77 363 SUPERFAMILY SSF51569 8 346 1.19E-131 T 11-10-2018 Patl_1587 94a99dc81dfed03003c2498dd756ec77 363 Gene3D G3DSA:3.20.20.70 3 350 3.6E-148 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_0777 914b3c9621f188315f2b3677ffb36a01 810 SUPERFAMILY SSF56300 385 713 6.83E-15 T 11-10-2018 Patl_0777 914b3c9621f188315f2b3677ffb36a01 810 Gene3D G3DSA:3.60.21.70 384 785 3.9E-14 T 11-10-2018 IPR038607 PhoD-like superfamily Patl_0777 914b3c9621f188315f2b3677ffb36a01 810 Pfam PF09423 PhoD-like phosphatase 391 695 1.5E-10 T 11-10-2018 IPR018946 Alkaline phosphatase D-related Patl_3847 86254da96cfd3e91654195383201762a 216 Pfam PF07947 YhhN family 27 202 3.6E-43 T 11-10-2018 IPR012506 YhhN-like GO:0016021 Patl_0127 fd20ab22353c1ab8a7c1c9d7f61f8a22 245 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 8 223 24.652 T 11-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 Patl_0127 fd20ab22353c1ab8a7c1c9d7f61f8a22 245 Pfam PF03932 CutC family 17 209 5.4E-55 T 11-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 Patl_0127 fd20ab22353c1ab8a7c1c9d7f61f8a22 245 Gene3D G3DSA:3.20.20.380 4 233 2.0E-61 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 Patl_0127 fd20ab22353c1ab8a7c1c9d7f61f8a22 245 SUPERFAMILY SSF110395 17 207 4.32E-45 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 Patl_2433 a9479a461bf79a792c2e37e0799f6cef 334 PIRSF PIRSF018005 4 333 2.5E-102 T 11-10-2018 IPR017804 Methyltransferase EgtD-like GO:0008168 Patl_2433 a9479a461bf79a792c2e37e0799f6cef 334 SUPERFAMILY SSF53335 48 316 3.1E-8 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_2433 a9479a461bf79a792c2e37e0799f6cef 334 Gene3D G3DSA:3.40.50.150 59 230 2.2E-43 T 11-10-2018 Patl_2433 a9479a461bf79a792c2e37e0799f6cef 334 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 32 329 3.0E-112 T 11-10-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 Patl_2433 a9479a461bf79a792c2e37e0799f6cef 334 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 33 331 2.6E-99 T 11-10-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent Patl_3605 9ba702481e673bdaa7ddf807e1c20300 85 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 5.5E-33 T 11-10-2018 IPR021432 Protein of unknown function DUF3081 Patl_0498 7407c78f755e1ea3a4a15f23478347ba 238 SUPERFAMILY SSF52266 44 233 9.02E-30 T 11-10-2018 Patl_0498 7407c78f755e1ea3a4a15f23478347ba 238 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 50 221 1.0E-15 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain Patl_0498 7407c78f755e1ea3a4a15f23478347ba 238 Gene3D G3DSA:3.40.50.1110 41 230 5.2E-22 T 11-10-2018 IPR036514 SGNH hydrolase superfamily Patl_2422 5a79d49dcc012860b2effaeaf38f9a21 301 SUPERFAMILY SSF88713 5 300 3.61E-91 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Patl_2422 5a79d49dcc012860b2effaeaf38f9a21 301 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 5 300 5.1E-159 T 11-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 Patl_2422 5a79d49dcc012860b2effaeaf38f9a21 301 Gene3D G3DSA:3.20.20.370 1 301 9.0E-104 T 11-10-2018 Patl_2422 5a79d49dcc012860b2effaeaf38f9a21 301 Pfam PF01522 Polysaccharide deacetylase 73 163 1.5E-11 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Patl_3260 54fec3df354e8ef6237c79a19aad513c 134 Gene3D G3DSA:2.170.150.70 4 117 2.4E-12 T 11-10-2018 Patl_3260 54fec3df354e8ef6237c79a19aad513c 134 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 114 4.4E-21 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 Patl_3260 54fec3df354e8ef6237c79a19aad513c 134 SUPERFAMILY SSF51316 3 133 3.98E-36 T 11-10-2018 IPR011057 Mss4-like superfamily Patl_3798 47471f543b3c3cb0b55f6e2e104ace57 462 Pfam PF02321 Outer membrane efflux protein 50 232 9.8E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Patl_3798 47471f543b3c3cb0b55f6e2e104ace57 462 Pfam PF02321 Outer membrane efflux protein 263 442 3.0E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Patl_3798 47471f543b3c3cb0b55f6e2e104ace57 462 Gene3D G3DSA:2.20.200.10 86 333 3.7E-121 T 11-10-2018 Patl_3798 47471f543b3c3cb0b55f6e2e104ace57 462 Gene3D G3DSA:1.20.1600.10 40 444 3.7E-121 T 11-10-2018 Patl_3798 47471f543b3c3cb0b55f6e2e104ace57 462 SUPERFAMILY SSF56954 39 445 5.36E-95 T 11-10-2018 Patl_3798 47471f543b3c3cb0b55f6e2e104ace57 462 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 2 444 5.3E-105 T 11-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 Patl_2001 530de276851bb03a5eba655edc63abfc 771 SUPERFAMILY SSF82866 185 380 2.49E-29 T 11-10-2018 Patl_2001 530de276851bb03a5eba655edc63abfc 771 Pfam PF03176 MMPL family 470 766 2.5E-16 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Patl_2001 530de276851bb03a5eba655edc63abfc 771 Pfam PF03176 MMPL family 140 401 1.3E-12 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Patl_2001 530de276851bb03a5eba655edc63abfc 771 Gene3D G3DSA:1.20.1640.10 591 771 4.5E-15 T 11-10-2018 Patl_2001 530de276851bb03a5eba655edc63abfc 771 Gene3D G3DSA:1.20.1640.10 205 394 3.8E-8 T 11-10-2018 Patl_2001 530de276851bb03a5eba655edc63abfc 771 SUPERFAMILY SSF82866 574 770 2.88E-33 T 11-10-2018 Patl_1318 e3084c99932f2b4864b8420e759707fe 147 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 31.444 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 Patl_1318 e3084c99932f2b4864b8420e759707fe 147 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 7.1E-51 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 Patl_1971 b9d4742070dec9b4b3ea72328a8b83a8 793 Gene3D G3DSA:2.60.120.430 51 240 2.4E-56 T 11-10-2018 Patl_1971 b9d4742070dec9b4b3ea72328a8b83a8 793 Gene3D G3DSA:3.20.20.80 242 789 2.0E-190 T 11-10-2018 Patl_1971 b9d4742070dec9b4b3ea72328a8b83a8 793 SUPERFAMILY SSF51445 435 772 3.06E-32 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_1971 b9d4742070dec9b4b3ea72328a8b83a8 793 Pfam PF02449 Beta-galactosidase 499 674 2.2E-8 T 11-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 Patl_0248 a9a266c69d95dea9a298d2d364c810ec 154 SUPERFAMILY SSF103039 1 152 4.32E-38 T 11-10-2018 IPR028976 CheC-like superfamily Patl_0248 a9a266c69d95dea9a298d2d364c810ec 154 Gene3D G3DSA:3.40.1550.10 1 154 2.2E-45 T 11-10-2018 IPR028976 CheC-like superfamily Patl_0248 a9a266c69d95dea9a298d2d364c810ec 154 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 3.7E-23 T 11-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain Patl_1250 7cd6cb76d1e27c168bb27e2753c85c7a 290 SUPERFAMILY SSF46934 1 55 2.86E-17 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 Patl_1250 7cd6cb76d1e27c168bb27e2753c85c7a 290 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Patl_1250 7cd6cb76d1e27c168bb27e2753c85c7a 290 SUPERFAMILY SSF54713 148 285 2.34E-54 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Patl_1250 7cd6cb76d1e27c168bb27e2753c85c7a 290 SUPERFAMILY SSF54713 55 144 7.19E-19 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Patl_1250 7cd6cb76d1e27c168bb27e2753c85c7a 290 Pfam PF00889 Elongation factor TS 70 268 1.6E-66 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Patl_1250 7cd6cb76d1e27c168bb27e2753c85c7a 290 Gene3D G3DSA:1.10.286.20 192 231 4.4E-23 T 11-10-2018 Patl_1250 7cd6cb76d1e27c168bb27e2753c85c7a 290 Hamap MF_00050 Elongation factor Ts [tsf]. 1 286 78.948 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Patl_1250 7cd6cb76d1e27c168bb27e2753c85c7a 290 Gene3D G3DSA:3.30.479.20 56 146 1.2E-23 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Patl_1250 7cd6cb76d1e27c168bb27e2753c85c7a 290 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 285 2.7E-111 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Patl_1250 7cd6cb76d1e27c168bb27e2753c85c7a 290 Gene3D G3DSA:1.10.8.10 1 55 2.0E-24 T 11-10-2018 Patl_2523 649605b2c34328dcd074ad072594fdc1 143 Gene3D G3DSA:3.90.1590.10 2 124 1.8E-12 T 11-10-2018 Patl_2523 649605b2c34328dcd074ad072594fdc1 143 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 29 113 2.3E-15 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 Patl_2523 649605b2c34328dcd074ad072594fdc1 143 SUPERFAMILY SSF51316 6 132 8.47E-34 T 11-10-2018 IPR011057 Mss4-like superfamily Patl_3483 b9ffbde8693dfd77c5a46fa6aaf83e36 286 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 283 3.5E-77 T 11-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Patl_3483 b9ffbde8693dfd77c5a46fa6aaf83e36 286 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 285 44.907 T 11-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 Patl_3483 b9ffbde8693dfd77c5a46fa6aaf83e36 286 Pfam PF02666 Phosphatidylserine decarboxylase 63 279 1.2E-60 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 Patl_0185 de592eda05515ad7f8d3a753f0c04642 158 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 7 150 1.6E-41 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Patl_0185 de592eda05515ad7f8d3a753f0c04642 158 PIRSF PIRSF018472 1 158 1.8E-49 T 11-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type Patl_0185 de592eda05515ad7f8d3a753f0c04642 158 Pfam PF04093 rod shape-determining protein MreD 8 150 8.5E-28 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Patl_0519 ee54b780c9049be4dd9d1c3c18ee47f8 388 Pfam PF02530 Porin subfamily 34 367 1.5E-7 T 11-10-2018 IPR003684 Porin, alpha proteobacteria type GO:0015288|GO:0016020|GO:0055085 Patl_0519 ee54b780c9049be4dd9d1c3c18ee47f8 388 SUPERFAMILY SSF56935 27 388 4.19E-30 T 11-10-2018 Patl_0193 42044734b81cfdef0ea71e0be2abbfb7 441 Pfam PF01523 Putative modulator of DNA gyrase 26 318 6.3E-61 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Patl_0193 42044734b81cfdef0ea71e0be2abbfb7 441 SUPERFAMILY SSF111283 5 440 1.27E-130 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Patl_0193 42044734b81cfdef0ea71e0be2abbfb7 441 Gene3D G3DSA:3.30.2290.10 1 227 5.5E-85 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Patl_1580 853fb6698e10c07e8144958829d2cf5d 120 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 7 119 30.953 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1580 853fb6698e10c07e8144958829d2cf5d 120 Gene3D G3DSA:2.30.30.790 1 120 2.4E-14 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1580 853fb6698e10c07e8144958829d2cf5d 120 PRINTS PR00061 Ribosomal protein L19 signature 39 68 5.3E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1580 853fb6698e10c07e8144958829d2cf5d 120 PRINTS PR00061 Ribosomal protein L19 signature 93 118 5.3E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1580 853fb6698e10c07e8144958829d2cf5d 120 PRINTS PR00061 Ribosomal protein L19 signature 9 38 5.3E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1580 853fb6698e10c07e8144958829d2cf5d 120 SUPERFAMILY SSF50104 7 119 4.31E-45 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily Patl_1580 853fb6698e10c07e8144958829d2cf5d 120 ProSitePatterns PS01015 Ribosomal protein L19 signature. 91 106 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_1580 853fb6698e10c07e8144958829d2cf5d 120 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 8 118 9.1E-50 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1580 853fb6698e10c07e8144958829d2cf5d 120 PIRSF PIRSF002191 1 120 6.6E-50 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_1580 853fb6698e10c07e8144958829d2cf5d 120 Pfam PF01245 Ribosomal protein L19 9 118 3.1E-49 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0999 89b275d922088cc509886d9182582c1a 121 SMART SM01374 1 121 4.7E-82 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Patl_0999 89b275d922088cc509886d9182582c1a 121 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Patl_0999 89b275d922088cc509886d9182582c1a 121 Pfam PF00238 Ribosomal protein L14p/L23e 1 121 1.2E-52 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Patl_0999 89b275d922088cc509886d9182582c1a 121 Gene3D G3DSA:2.40.150.20 1 121 9.3E-52 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Patl_0999 89b275d922088cc509886d9182582c1a 121 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 121 26.682 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Patl_0999 89b275d922088cc509886d9182582c1a 121 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 121 7.3E-56 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Patl_0999 89b275d922088cc509886d9182582c1a 121 SUPERFAMILY SSF50193 1 121 6.67E-49 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Patl_1129 6aa0cefb4b386cd49ed7807ee8918b6a 298 Gene3D G3DSA:3.40.190.290 91 292 3.9E-64 T 11-10-2018 Patl_1129 6aa0cefb4b386cd49ed7807ee8918b6a 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.6E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_1129 6aa0cefb4b386cd49ed7807ee8918b6a 298 SUPERFAMILY SSF46785 3 112 1.01E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1129 6aa0cefb4b386cd49ed7807ee8918b6a 298 Gene3D G3DSA:1.10.10.10 3 89 8.0E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1129 6aa0cefb4b386cd49ed7807ee8918b6a 298 Pfam PF03466 LysR substrate binding domain 89 291 4.9E-46 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_1129 6aa0cefb4b386cd49ed7807ee8918b6a 298 SUPERFAMILY SSF53850 90 295 3.57E-48 T 11-10-2018 Patl_2328 4a8020691c3c234636acb814a073a54c 567 Gene3D G3DSA:3.30.2350.10 354 566 2.1E-60 T 11-10-2018 Patl_2328 4a8020691c3c234636acb814a073a54c 567 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 409 423 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_2328 4a8020691c3c234636acb814a073a54c 567 Pfam PF00849 RNA pseudouridylate synthase 371 520 1.4E-29 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_2328 4a8020691c3c234636acb814a073a54c 567 SUPERFAMILY SSF55120 361 564 1.76E-58 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_0157 b350a19e3fc0fc0dd899a1044146e839 185 PIRSF PIRSF000192 1 183 1.4E-50 T 11-10-2018 IPR016008 Amine dehydrogenase light chain GO:0009308|GO:0030058|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 Patl_0157 b350a19e3fc0fc0dd899a1044146e839 185 Gene3D G3DSA:2.60.30.10 46 184 4.3E-53 T 11-10-2018 IPR036560 Methylamine/Aralkylamine dehydrogenase light chain superfamily GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 Patl_0157 b350a19e3fc0fc0dd899a1044146e839 185 SUPERFAMILY SSF57561 66 181 9.42E-52 T 11-10-2018 IPR036560 Methylamine/Aralkylamine dehydrogenase light chain superfamily GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 Patl_0157 b350a19e3fc0fc0dd899a1044146e839 185 Pfam PF02975 Methylamine dehydrogenase, L chain 72 180 1.6E-49 T 11-10-2018 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 Patl_0794 bb8f67d49c8c0aa6d2c1d02248677cd9 197 Gene3D G3DSA:3.40.50.1000 8 189 1.7E-41 T 11-10-2018 IPR023214 HAD superfamily Patl_0794 bb8f67d49c8c0aa6d2c1d02248677cd9 197 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 7 187 1.8E-49 T 11-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase Patl_0794 bb8f67d49c8c0aa6d2c1d02248677cd9 197 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 187 1.4E-29 T 11-10-2018 Patl_0794 bb8f67d49c8c0aa6d2c1d02248677cd9 197 Gene3D G3DSA:1.10.150.240 20 90 1.7E-41 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Patl_0794 bb8f67d49c8c0aa6d2c1d02248677cd9 197 SUPERFAMILY SSF56784 6 193 6.51E-46 T 11-10-2018 IPR036412 HAD-like superfamily Patl_0794 bb8f67d49c8c0aa6d2c1d02248677cd9 197 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 124 187 6.5E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_2601 50d6324a99ebc626e17873128a3084ed 154 Gene3D G3DSA:3.10.20.30 1 71 2.0E-25 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_2601 50d6324a99ebc626e17873128a3084ed 154 SUPERFAMILY SSF47741 81 150 5.89E-31 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Patl_2601 50d6324a99ebc626e17873128a3084ed 154 Gene3D G3DSA:1.10.150.120 72 154 3.8E-30 T 11-10-2018 Patl_2601 50d6324a99ebc626e17873128a3084ed 154 Pfam PF01799 [2Fe-2S] binding domain 70 143 6.6E-30 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Patl_2601 50d6324a99ebc626e17873128a3084ed 154 SUPERFAMILY SSF54292 2 84 9.18E-26 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Patl_2601 50d6324a99ebc626e17873128a3084ed 154 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 Patl_2601 50d6324a99ebc626e17873128a3084ed 154 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 52 6.4E-7 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Patl_4277 dfc63138c3a3a5ffeab16438062109c2 431 Gene3D G3DSA:2.30.40.10 27 423 1.4E-133 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Patl_4277 dfc63138c3a3a5ffeab16438062109c2 431 Gene3D G3DSA:3.20.20.140 80 388 1.4E-133 T 11-10-2018 Patl_4277 dfc63138c3a3a5ffeab16438062109c2 431 Pfam PF01979 Amidohydrolase family 74 425 1.5E-50 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Patl_4277 dfc63138c3a3a5ffeab16438062109c2 431 SUPERFAMILY SSF51556 78 389 3.14E-105 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_4277 dfc63138c3a3a5ffeab16438062109c2 431 SUPERFAMILY SSF51338 37 92 2.99E-10 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Patl_0350 0a4fed99a5e06b7669d15384553880e9 128 SUPERFAMILY SSF55298 2 127 6.44E-43 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Patl_0350 0a4fed99a5e06b7669d15384553880e9 128 Pfam PF01042 Endoribonuclease L-PSP 9 124 3.2E-40 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 Patl_0350 0a4fed99a5e06b7669d15384553880e9 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 3.3E-49 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 Patl_0350 0a4fed99a5e06b7669d15384553880e9 128 Gene3D G3DSA:3.30.1330.40 1 126 1.4E-47 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Patl_0350 0a4fed99a5e06b7669d15384553880e9 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 Patl_2372 2dff26881861ead46799df983e52500d 231 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 1 224 37.342 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 Patl_2372 2dff26881861ead46799df983e52500d 231 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 10 78 5.4E-17 T 11-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 Patl_2372 2dff26881861ead46799df983e52500d 231 PIRSF PIRSF037208 1 231 2.1E-85 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 Patl_2372 2dff26881861ead46799df983e52500d 231 SUPERFAMILY SSF55729 71 226 7.87E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_2372 2dff26881861ead46799df983e52500d 231 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 98 218 2.6E-35 T 11-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 Patl_0698 b37334ef6b2ea943b4647962b0be7d1f 281 Pfam PF05944 Phage small terminase subunit 78 203 4.7E-28 T 11-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 Patl_2707 cebe56c3180c9ae0ed96f2add1de11b4 315 Pfam PF03060 Nitronate monooxygenase 56 301 2.3E-20 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Patl_2707 cebe56c3180c9ae0ed96f2add1de11b4 315 SUPERFAMILY SSF51412 4 303 7.33E-65 T 11-10-2018 Patl_2707 cebe56c3180c9ae0ed96f2add1de11b4 315 Gene3D G3DSA:3.20.20.70 3 313 6.1E-63 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_3247 81b09c6815275d6f86677ac521c2f3ad 255 PRINTS PR01805 VacJ lipoprotein signature 55 71 3.8E-25 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Patl_3247 81b09c6815275d6f86677ac521c2f3ad 255 PRINTS PR01805 VacJ lipoprotein signature 142 159 3.8E-25 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Patl_3247 81b09c6815275d6f86677ac521c2f3ad 255 PRINTS PR01805 VacJ lipoprotein signature 37 50 3.8E-25 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Patl_3247 81b09c6815275d6f86677ac521c2f3ad 255 PRINTS PR01805 VacJ lipoprotein signature 106 123 3.8E-25 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Patl_3247 81b09c6815275d6f86677ac521c2f3ad 255 Pfam PF04333 MlaA lipoprotein 36 227 7.8E-66 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Patl_2975 76d89b5a117497c8941da2a3c34eb11c 254 Gene3D G3DSA:3.40.50.1820 37 242 1.3E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2975 76d89b5a117497c8941da2a3c34eb11c 254 Pfam PF12146 Serine aminopeptidase, S33 42 130 3.8E-7 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 Patl_2975 76d89b5a117497c8941da2a3c34eb11c 254 SUPERFAMILY SSF53474 39 235 2.46E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_1187 f158ccb0579663562a3691defdc43895 488 Pfam PF13440 Polysaccharide biosynthesis protein 34 324 1.2E-57 T 11-10-2018 Patl_3000 3d1d766d722b325b7135a2ad83972586 358 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 84 353 1.4E-66 T 11-10-2018 IPR006507 Uncharacterised protein family UPF0283 Patl_3000 3d1d766d722b325b7135a2ad83972586 358 Pfam PF05128 Domain of unknown function (DUF697) 196 354 1.8E-50 T 11-10-2018 IPR021147 Protein of unknown function DUF697 Patl_1721 f888bfe8598c67fec0f10d9e66c61837 204 SUPERFAMILY SSF46626 116 204 8.0E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_1721 f888bfe8598c67fec0f10d9e66c61837 204 Pfam PF00034 Cytochrome c 120 204 6.2E-13 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1721 f888bfe8598c67fec0f10d9e66c61837 204 Pfam PF00034 Cytochrome c 32 105 9.8E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1721 f888bfe8598c67fec0f10d9e66c61837 204 Gene3D G3DSA:1.10.760.10 13 105 8.7E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_1721 f888bfe8598c67fec0f10d9e66c61837 204 PIRSF PIRSF000005 21 108 5.2E-17 T 11-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 Patl_1721 f888bfe8598c67fec0f10d9e66c61837 204 PIRSF PIRSF000005 105 204 2.4E-14 T 11-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 Patl_1721 f888bfe8598c67fec0f10d9e66c61837 204 Gene3D G3DSA:1.10.760.10 116 204 1.8E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_1721 f888bfe8598c67fec0f10d9e66c61837 204 SUPERFAMILY SSF46626 31 106 3.91E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_0856 c693c060625a3ae05c285d9239bde407 386 Gene3D G3DSA:1.20.1440.110 7 121 1.9E-11 T 11-10-2018 Patl_0856 c693c060625a3ae05c285d9239bde407 386 Gene3D G3DSA:3.40.50.1820 123 385 5.3E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0856 c693c060625a3ae05c285d9239bde407 386 Pfam PF00326 Prolyl oligopeptidase family 211 380 3.7E-9 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Patl_0856 c693c060625a3ae05c285d9239bde407 386 SUPERFAMILY SSF53474 8 380 9.42E-60 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2858 36c061af78466a6589df4e9c778e6053 655 Gene3D G3DSA:3.60.21.70 313 568 7.8E-8 T 11-10-2018 IPR038607 PhoD-like superfamily Patl_2858 36c061af78466a6589df4e9c778e6053 655 SUPERFAMILY SSF56300 321 554 7.59E-6 T 11-10-2018 Patl_3117 62c4ab46cec6b5c75cfdda2f410601a9 375 SUPERFAMILY SSF69593 85 240 1.57E-7 T 11-10-2018 Patl_3117 62c4ab46cec6b5c75cfdda2f410601a9 375 Pfam PF01553 Acyltransferase 90 192 1.7E-10 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Patl_1233 1c681c368754576ff0e2ba4b388c4841 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 6.5E-19 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Patl_1233 1c681c368754576ff0e2ba4b388c4841 127 SUPERFAMILY SSF54593 1 126 6.98E-33 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_1233 1c681c368754576ff0e2ba4b388c4841 127 Gene3D G3DSA:3.10.180.10 7 126 3.4E-31 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_4127 0eac41d4207512355504628116e9e56c 181 SUPERFAMILY SSF46689 3 65 1.8E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_4127 0eac41d4207512355504628116e9e56c 181 Gene3D G3DSA:1.10.357.10 1 177 6.8E-41 T 11-10-2018 Patl_4127 0eac41d4207512355504628116e9e56c 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 51 4.0E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_4127 0eac41d4207512355504628116e9e56c 181 SUPERFAMILY SSF48498 78 178 1.17E-17 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Patl_2119 81aad4c82e10987550c89336ea1a82ec 271 Gene3D G3DSA:3.20.10.10 120 260 1.8E-43 T 11-10-2018 Patl_2119 81aad4c82e10987550c89336ea1a82ec 271 Gene3D G3DSA:3.30.470.10 1 106 2.8E-28 T 11-10-2018 Patl_2119 81aad4c82e10987550c89336ea1a82ec 271 Pfam PF01063 Amino-transferase class IV 23 246 1.4E-46 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Patl_2119 81aad4c82e10987550c89336ea1a82ec 271 SUPERFAMILY SSF56752 3 250 6.54E-63 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Patl_2119 81aad4c82e10987550c89336ea1a82ec 271 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 2 266 5.2E-111 T 11-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 Patl_4046 6924646f8b1e5f7e48285011741d2a7a 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 2.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_4046 6924646f8b1e5f7e48285011741d2a7a 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_4046 6924646f8b1e5f7e48285011741d2a7a 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 215 2.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_4046 6924646f8b1e5f7e48285011741d2a7a 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 2.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_4046 6924646f8b1e5f7e48285011741d2a7a 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 2.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_4046 6924646f8b1e5f7e48285011741d2a7a 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 2.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_4046 6924646f8b1e5f7e48285011741d2a7a 231 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 227 1.0E-46 T 11-10-2018 Patl_4046 6924646f8b1e5f7e48285011741d2a7a 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 129 1.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_4046 6924646f8b1e5f7e48285011741d2a7a 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 68 79 1.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_4046 6924646f8b1e5f7e48285011741d2a7a 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 160 1.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_4046 6924646f8b1e5f7e48285011741d2a7a 231 SUPERFAMILY SSF51735 2 229 1.32E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_4046 6924646f8b1e5f7e48285011741d2a7a 231 Gene3D G3DSA:3.40.50.720 1 230 1.0E-62 T 11-10-2018 Patl_3889 d84329a233f10768d2da80374fec798c 365 Gene3D G3DSA:3.10.310.10 172 347 1.0E-116 T 11-10-2018 Patl_3889 d84329a233f10768d2da80374fec798c 365 SUPERFAMILY SSF54506 5 173 1.2E-63 T 11-10-2018 Patl_3889 d84329a233f10768d2da80374fec798c 365 Gene3D G3DSA:3.10.310.10 10 360 1.0E-116 T 11-10-2018 Patl_3889 d84329a233f10768d2da80374fec798c 365 SUPERFAMILY SSF54506 177 363 3.66E-53 T 11-10-2018 Patl_3889 d84329a233f10768d2da80374fec798c 365 Pfam PF04303 PrpF protein 8 361 2.2E-110 T 11-10-2018 IPR007400 PrpF protein Patl_2854 edd4d64679a00c96df46b4b2cb334095 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 58 3.5E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_2854 edd4d64679a00c96df46b4b2cb334095 181 Gene3D G3DSA:1.10.357.10 4 177 1.8E-27 T 11-10-2018 Patl_2854 edd4d64679a00c96df46b4b2cb334095 181 SUPERFAMILY SSF46689 6 75 2.99E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_1948 887adef791d058c24b97798a79f02ed9 327 SUPERFAMILY SSF143422 16 193 8.63E-20 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Patl_1948 887adef791d058c24b97798a79f02ed9 327 SMART SM01321 12 187 0.0035 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Patl_2045 3341deae86cedb8beb1e3b45eabf19cd 140 SUPERFAMILY SSF46785 7 139 1.63E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_2045 3341deae86cedb8beb1e3b45eabf19cd 140 Pfam PF01047 MarR family 34 93 1.6E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_2045 3341deae86cedb8beb1e3b45eabf19cd 140 SMART SM00347 27 129 2.2E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_2045 3341deae86cedb8beb1e3b45eabf19cd 140 Gene3D G3DSA:1.10.10.10 2 140 5.8E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2045 3341deae86cedb8beb1e3b45eabf19cd 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 7.6E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_2045 3341deae86cedb8beb1e3b45eabf19cd 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 7.6E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_2045 3341deae86cedb8beb1e3b45eabf19cd 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 7.6E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_2045 3341deae86cedb8beb1e3b45eabf19cd 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 7.6E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_3210 88a1fda254b7267d6c767cb5085e9e69 361 Gene3D G3DSA:3.40.50.300 3 173 5.1E-11 T 11-10-2018 Patl_3210 88a1fda254b7267d6c767cb5085e9e69 361 SUPERFAMILY SSF52540 4 133 3.92E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3209 fd883a777a7f900bdf3bba1223018ff8 389 Pfam PF04230 Polysaccharide pyruvyl transferase 33 306 9.8E-25 T 11-10-2018 IPR007345 Polysaccharide pyruvyl transferase Patl_0456 873bade177645680c57bd618d024d03b 202 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 200 1.3E-55 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Patl_0456 873bade177645680c57bd618d024d03b 202 PIRSF PIRSF006102 1 202 8.5E-60 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Patl_0456 873bade177645680c57bd618d024d03b 202 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 202 28.193 T 11-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 Patl_0456 873bade177645680c57bd618d024d03b 202 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 200 2.3E-95 T 11-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 Patl_3133 3b02e69f9e47ca1c11f1c17dc58fe32a 90 SMART SM00411 1 90 2.6E-43 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Patl_3133 3b02e69f9e47ca1c11f1c17dc58fe32a 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Patl_3133 3b02e69f9e47ca1c11f1c17dc58fe32a 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.8E-34 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Patl_3133 3b02e69f9e47ca1c11f1c17dc58fe32a 90 Gene3D G3DSA:4.10.520.10 1 90 3.4E-36 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Patl_3133 3b02e69f9e47ca1c11f1c17dc58fe32a 90 SUPERFAMILY SSF47729 1 90 2.36E-32 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Patl_3133 3b02e69f9e47ca1c11f1c17dc58fe32a 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.2E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Patl_3133 3b02e69f9e47ca1c11f1c17dc58fe32a 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.2E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Patl_3133 3b02e69f9e47ca1c11f1c17dc58fe32a 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.2E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Patl_0857 1536a9538b75834b1a38bb6d7cd0741e 310 SUPERFAMILY SSF54593 144 279 2.01E-29 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_0857 1536a9538b75834b1a38bb6d7cd0741e 310 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 152 265 5.3E-11 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Patl_0857 1536a9538b75834b1a38bb6d7cd0741e 310 Gene3D G3DSA:3.10.180.10 142 289 1.5E-30 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2978 dd51cfa870c8f0d0dbbb1e1847b8ed4c 297 SMART SM00342 205 287 2.2E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_2978 dd51cfa870c8f0d0dbbb1e1847b8ed4c 297 Gene3D G3DSA:1.10.10.60 189 292 4.4E-25 T 11-10-2018 Patl_2978 dd51cfa870c8f0d0dbbb1e1847b8ed4c 297 SUPERFAMILY SSF46689 191 238 1.08E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_2978 dd51cfa870c8f0d0dbbb1e1847b8ed4c 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 283 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Patl_2978 dd51cfa870c8f0d0dbbb1e1847b8ed4c 297 Pfam PF06719 AraC-type transcriptional regulator N-terminus 24 179 1.2E-32 T 11-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal Patl_2978 dd51cfa870c8f0d0dbbb1e1847b8ed4c 297 SUPERFAMILY SSF46689 241 289 6.72E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_2978 dd51cfa870c8f0d0dbbb1e1847b8ed4c 297 Pfam PF12833 Helix-turn-helix domain 211 287 2.8E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Patl_0303 bf3db5e64dc0ea303815bfe22facef42 219 Pfam PF11736 Protein of unknown function (DUF3299) 64 207 5.4E-40 T 11-10-2018 IPR021727 Protein of unknown function DUF3299 Patl_0303 bf3db5e64dc0ea303815bfe22facef42 219 Gene3D G3DSA:2.40.50.870 58 213 1.1E-35 T 11-10-2018 Patl_2903 19c0dcb847a4f7095d72ec30c152f7df 401 Gene3D G3DSA:3.30.420.40 24 377 4.1E-106 T 11-10-2018 Patl_2903 19c0dcb847a4f7095d72ec30c152f7df 401 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 18 375 1.1E-96 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Patl_2903 19c0dcb847a4f7095d72ec30c152f7df 401 Gene3D G3DSA:3.30.420.40 168 360 4.1E-106 T 11-10-2018 Patl_2903 19c0dcb847a4f7095d72ec30c152f7df 401 SUPERFAMILY SSF53067 17 346 1.17E-13 T 11-10-2018 Patl_2903 19c0dcb847a4f7095d72ec30c152f7df 401 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 17 400 33.937 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 Patl_4107 10a834a7241459c2a99bc98c1e08c146 139 SUPERFAMILY SSF53850 21 135 1.88E-6 T 11-10-2018 Patl_3118 92c1d4129064a71c92c11b9dd8e928f3 177 Gene3D G3DSA:3.10.640.10 1 177 6.1E-67 T 11-10-2018 IPR038590 YaeQ superfamily Patl_3118 92c1d4129064a71c92c11b9dd8e928f3 177 SMART SM01322 1 174 2.0E-101 T 11-10-2018 IPR009822 YaeQ Patl_3118 92c1d4129064a71c92c11b9dd8e928f3 177 SUPERFAMILY SSF52980 2 175 9.65E-65 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Patl_3118 92c1d4129064a71c92c11b9dd8e928f3 177 Pfam PF07152 YaeQ protein 1 170 3.3E-69 T 11-10-2018 IPR009822 YaeQ Patl_3118 92c1d4129064a71c92c11b9dd8e928f3 177 PIRSF PIRSF011484 1 177 2.8E-69 T 11-10-2018 IPR009822 YaeQ Patl_2032 bfec8bbb73464733c073e7b333e11e64 197 SMART SM00471 26 151 0.0073 T 11-10-2018 IPR003607 HD/PDEase domain Patl_2032 bfec8bbb73464733c073e7b333e11e64 197 SUPERFAMILY SSF109604 3 185 3.98E-30 T 11-10-2018 Patl_2032 bfec8bbb73464733c073e7b333e11e64 197 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 83 186 8.0E-33 T 11-10-2018 Patl_2032 bfec8bbb73464733c073e7b333e11e64 197 Pfam PF13023 HD domain 19 142 4.9E-7 T 11-10-2018 IPR006674 HD domain Patl_2032 bfec8bbb73464733c073e7b333e11e64 197 Gene3D G3DSA:1.10.3210.10 1 197 7.8E-70 T 11-10-2018 Patl_1034 57252a0a7a54e6f732986ccc12df16d9 183 Pfam PF00963 Cohesin domain 21 74 5.4E-6 T 11-10-2018 IPR002102 Cellulosome anchoring protein, cohesin domain GO:0000272|GO:0030246 Patl_1034 57252a0a7a54e6f732986ccc12df16d9 183 SUPERFAMILY SSF49384 19 79 2.04E-8 T 11-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Patl_1034 57252a0a7a54e6f732986ccc12df16d9 183 Gene3D G3DSA:2.60.40.680 14 161 2.3E-8 T 11-10-2018 Patl_0276 00c80e6d50281e081e4d7b2c658cc37f 308 SUPERFAMILY SSF53474 32 271 5.4E-43 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0276 00c80e6d50281e081e4d7b2c658cc37f 308 Gene3D G3DSA:3.40.50.1820 35 273 6.5E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0276 00c80e6d50281e081e4d7b2c658cc37f 308 Pfam PF07859 alpha/beta hydrolase fold 76 157 2.9E-15 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 Patl_3001 8ac00411edac91c67556424de78135c7 474 PIRSF PIRSF019381 4 474 2.5E-206 T 11-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein Patl_3001 8ac00411edac91c67556424de78135c7 474 Pfam PF04317 YcjX-like family, DUF463 30 473 6.8E-176 T 11-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein Patl_0736 161f3710fa1d594d8fd6e4f05e9517f3 198 SUPERFAMILY SSF46689 5 67 1.3E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0736 161f3710fa1d594d8fd6e4f05e9517f3 198 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 144 195 6.0E-10 T 11-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type Patl_0736 161f3710fa1d594d8fd6e4f05e9517f3 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.1E-17 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_0736 161f3710fa1d594d8fd6e4f05e9517f3 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 53 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Patl_0736 161f3710fa1d594d8fd6e4f05e9517f3 198 Gene3D G3DSA:1.10.10.60 1 55 5.6E-21 T 11-10-2018 Patl_0736 161f3710fa1d594d8fd6e4f05e9517f3 198 Gene3D G3DSA:1.10.357.10 58 197 4.5E-24 T 11-10-2018 Patl_0736 161f3710fa1d594d8fd6e4f05e9517f3 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.5E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_0736 161f3710fa1d594d8fd6e4f05e9517f3 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.5E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_1387 c399b09e84f4f5340c94c2827936a2df 402 Pfam PF01609 Transposase DDE domain 91 326 1.0E-19 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Patl_1387 c399b09e84f4f5340c94c2827936a2df 402 SUPERFAMILY SSF53098 2 378 7.43E-63 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_0863 c399b09e84f4f5340c94c2827936a2df 402 Pfam PF01609 Transposase DDE domain 91 326 1.0E-19 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Patl_0863 c399b09e84f4f5340c94c2827936a2df 402 SUPERFAMILY SSF53098 2 378 7.43E-63 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_1367 34f1cf9aaf4d653e8921d3f232a597a7 218 SUPERFAMILY SSF53955 16 188 1.58E-23 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily Patl_1367 34f1cf9aaf4d653e8921d3f232a597a7 218 Gene3D G3DSA:1.10.530.10 49 203 6.8E-12 T 11-10-2018 Patl_3843 19e94a2742cd0e24d2d6dd7613f16109 280 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 266 3.0E-88 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Patl_3843 19e94a2742cd0e24d2d6dd7613f16109 280 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 264 20.408 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Patl_3843 19e94a2742cd0e24d2d6dd7613f16109 280 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 259 4.9E-84 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Patl_3843 19e94a2742cd0e24d2d6dd7613f16109 280 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 140 152 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Patl_4103 e8f7bc4ce793acc2d25cce9e78134998 586 Pfam PF13395 HNH endonuclease 474 513 1.4E-7 T 11-10-2018 IPR003615 HNH nuclease Patl_4103 e8f7bc4ce793acc2d25cce9e78134998 586 Gene3D G3DSA:3.40.50.150 4 201 2.0E-21 T 11-10-2018 Patl_4103 e8f7bc4ce793acc2d25cce9e78134998 586 Pfam PF13649 Methyltransferase domain 44 148 7.6E-11 T 11-10-2018 Patl_4103 e8f7bc4ce793acc2d25cce9e78134998 586 SUPERFAMILY SSF53335 22 187 3.01E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_4103 e8f7bc4ce793acc2d25cce9e78134998 586 Gene3D G3DSA:3.30.40.60 431 535 2.7E-7 T 11-10-2018 Patl_2806 316e2153ef38641fe177111f8d49a079 198 Pfam PF03843 Outer membrane lipoprotein Slp family 14 163 4.2E-48 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Patl_2806 316e2153ef38641fe177111f8d49a079 198 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 6 169 1.9E-32 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Patl_2806 316e2153ef38641fe177111f8d49a079 198 PIRSF PIRSF004982 1 182 1.6E-52 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 Patl_4284 de9df17e77d0ddb6b1c8b79290b6642b 113 SUPERFAMILY SSF53850 6 102 2.71E-7 T 11-10-2018 Patl_4284 de9df17e77d0ddb6b1c8b79290b6642b 113 Gene3D G3DSA:3.40.190.10 10 78 2.3E-11 T 11-10-2018 Patl_4284 de9df17e77d0ddb6b1c8b79290b6642b 113 Gene3D G3DSA:3.40.190.10 79 96 2.3E-11 T 11-10-2018 Patl_2586 cc2532b8faef794463bc87ab0a4d156d 405 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 3 101 6.5E-5 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Patl_3222 46cd26f0f56b93db22d7128dd8249d88 306 SUPERFAMILY SSF53756 56 245 1.96E-7 T 11-10-2018 Patl_2965 02efc07335f348e4931562c34f33f612 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 6.9E-88 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Patl_2965 02efc07335f348e4931562c34f33f612 193 PIRSF PIRSF006102 1 193 4.9E-62 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Patl_2965 02efc07335f348e4931562c34f33f612 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.077 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 Patl_2965 02efc07335f348e4931562c34f33f612 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 190 1.7E-59 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 Patl_3674 05adae73733ac36058949b0e66afff5a 585 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 77 235 2.0E-19 T 11-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Patl_3094 3ae5043a3f266a825cb51edd81c67248 230 PRINTS PR01008 Flagellar L-ring protein signature 206 220 6.9E-22 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Patl_3094 3ae5043a3f266a825cb51edd81c67248 230 PRINTS PR01008 Flagellar L-ring protein signature 190 204 6.9E-22 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Patl_3094 3ae5043a3f266a825cb51edd81c67248 230 PRINTS PR01008 Flagellar L-ring protein signature 143 158 6.9E-22 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Patl_3094 3ae5043a3f266a825cb51edd81c67248 230 PRINTS PR01008 Flagellar L-ring protein signature 70 82 6.9E-22 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Patl_3094 3ae5043a3f266a825cb51edd81c67248 230 PRINTS PR01008 Flagellar L-ring protein signature 169 185 6.9E-22 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Patl_3094 3ae5043a3f266a825cb51edd81c67248 230 Pfam PF02107 Flagellar L-ring protein 49 229 1.2E-61 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Patl_3094 3ae5043a3f266a825cb51edd81c67248 230 Hamap MF_00415 Flagellar L-ring protein [flgH]. 5 227 26.366 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Patl_2103 ee877998706125e15ffd7d74061b9314 293 Gene3D G3DSA:3.40.50.12370 1 293 5.8E-65 T 11-10-2018 Patl_2103 ee877998706125e15ffd7d74061b9314 293 Pfam PF00582 Universal stress protein family 178 291 1.3E-9 T 11-10-2018 IPR006016 UspA Patl_2103 ee877998706125e15ffd7d74061b9314 293 Pfam PF00582 Universal stress protein family 4 140 1.3E-7 T 11-10-2018 IPR006016 UspA Patl_2103 ee877998706125e15ffd7d74061b9314 293 SUPERFAMILY SSF52402 4 140 5.94E-14 T 11-10-2018 Patl_2103 ee877998706125e15ffd7d74061b9314 293 PRINTS PR01438 Universal stress protein signature 252 264 5.4E-9 T 11-10-2018 IPR006015 Universal stress protein A Patl_2103 ee877998706125e15ffd7d74061b9314 293 PRINTS PR01438 Universal stress protein signature 270 292 5.4E-9 T 11-10-2018 IPR006015 Universal stress protein A Patl_2103 ee877998706125e15ffd7d74061b9314 293 PRINTS PR01438 Universal stress protein signature 3 21 5.4E-9 T 11-10-2018 IPR006015 Universal stress protein A Patl_2103 ee877998706125e15ffd7d74061b9314 293 SUPERFAMILY SSF52402 151 292 7.79E-14 T 11-10-2018 Patl_1457 f71568e0fa753ef4851111f29fa93127 144 Gene3D G3DSA:3.30.300.20 2 139 1.0E-31 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Patl_1457 f71568e0fa753ef4851111f29fa93127 144 Pfam PF02566 OsmC-like protein 40 138 9.4E-19 T 11-10-2018 IPR003718 OsmC/Ohr family Patl_1457 f71568e0fa753ef4851111f29fa93127 144 SUPERFAMILY SSF82784 7 138 4.06E-31 T 11-10-2018 IPR036102 OsmC/Ohr superfamily Patl_2609 977e853f89ebe212d7c31add85543431 142 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 6.8E-5 T 11-10-2018 Patl_2609 977e853f89ebe212d7c31add85543431 142 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 6.8E-5 T 11-10-2018 Patl_0539 936c94dff0f5176f0144e9d686fed8f0 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 6.6E-45 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 Patl_0539 936c94dff0f5176f0144e9d686fed8f0 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 2.4E-132 T 11-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 Patl_0539 936c94dff0f5176f0144e9d686fed8f0 311 PIRSF PIRSF000102 1 300 1.3E-63 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Patl_0539 936c94dff0f5176f0144e9d686fed8f0 311 Gene3D G3DSA:3.90.110.10 147 310 1.5E-53 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Patl_0539 936c94dff0f5176f0144e9d686fed8f0 311 SUPERFAMILY SSF56327 146 310 5.96E-42 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Patl_0539 936c94dff0f5176f0144e9d686fed8f0 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 310 54.092 T 11-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 Patl_0539 936c94dff0f5176f0144e9d686fed8f0 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 11-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Patl_0539 936c94dff0f5176f0144e9d686fed8f0 311 Gene3D G3DSA:3.40.50.720 1 146 7.8E-63 T 11-10-2018 Patl_0539 936c94dff0f5176f0144e9d686fed8f0 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 1.9E-47 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 Patl_0539 936c94dff0f5176f0144e9d686fed8f0 311 SUPERFAMILY SSF51735 1 145 3.23E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0447 c28a4584b5dc8946ebada36914348df9 384 Pfam PF05175 Methyltransferase small domain 206 379 5.9E-50 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Patl_0447 c28a4584b5dc8946ebada36914348df9 384 PIRSF PIRSF037565 1 384 4.1E-162 T 11-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 Patl_0447 c28a4584b5dc8946ebada36914348df9 384 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 383 48.458 T 11-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 Patl_0447 c28a4584b5dc8946ebada36914348df9 384 Gene3D G3DSA:3.40.50.150 9 186 1.8E-51 T 11-10-2018 Patl_0447 c28a4584b5dc8946ebada36914348df9 384 Gene3D G3DSA:3.40.50.150 191 384 3.1E-50 T 11-10-2018 Patl_0447 c28a4584b5dc8946ebada36914348df9 384 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 312 318 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Patl_0447 c28a4584b5dc8946ebada36914348df9 384 SUPERFAMILY SSF53335 214 364 6.29E-27 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3620 0a3ebb9d78af0888245054bb6fcddf82 257 Pfam PF03883 Peroxide stress protein YaaA 1 243 2.0E-91 T 11-10-2018 IPR005583 Peroxide stress protein YaaA Patl_3620 0a3ebb9d78af0888245054bb6fcddf82 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 36.893 T 11-10-2018 IPR005583 Peroxide stress protein YaaA Patl_0264 3e01d0da43217b2f7ee99a38bf1d4799 187 SMART SM00749 124 187 0.02 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Patl_0264 3e01d0da43217b2f7ee99a38bf1d4799 187 SMART SM00749 45 105 4.9 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Patl_0264 3e01d0da43217b2f7ee99a38bf1d4799 187 Pfam PF04972 BON domain 119 186 1.9E-14 T 11-10-2018 IPR007055 BON domain Patl_0264 3e01d0da43217b2f7ee99a38bf1d4799 187 Pfam PF04972 BON domain 38 103 1.3E-14 T 11-10-2018 IPR007055 BON domain Patl_0742 39c0b0771305e3b570c570c33c2f77bf 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 138 2.4E-55 T 11-10-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 Patl_0742 39c0b0771305e3b570c570c33c2f77bf 143 SUPERFAMILY SSF82784 5 140 2.09E-31 T 11-10-2018 IPR036102 OsmC/Ohr superfamily Patl_0742 39c0b0771305e3b570c570c33c2f77bf 143 Pfam PF02566 OsmC-like protein 42 139 2.7E-17 T 11-10-2018 IPR003718 OsmC/Ohr family Patl_0742 39c0b0771305e3b570c570c33c2f77bf 143 Gene3D G3DSA:3.30.300.20 1 142 1.3E-37 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta Patl_1936 8b9984faa96b21ea3d4555c2ce8b28bd 407 Gene3D G3DSA:3.40.50.720 5 251 5.9E-83 T 11-10-2018 Patl_1936 8b9984faa96b21ea3d4555c2ce8b28bd 407 SMART SM00450 306 403 4.4E-5 T 11-10-2018 IPR001763 Rhodanese-like domain Patl_1936 8b9984faa96b21ea3d4555c2ce8b28bd 407 SUPERFAMILY SSF52821 320 396 1.1E-16 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Patl_1936 8b9984faa96b21ea3d4555c2ce8b28bd 407 Pfam PF00581 Rhodanese-like domain 311 396 5.0E-6 T 11-10-2018 IPR001763 Rhodanese-like domain Patl_1936 8b9984faa96b21ea3d4555c2ce8b28bd 407 SUPERFAMILY SSF69572 7 248 3.27E-78 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Patl_1936 8b9984faa96b21ea3d4555c2ce8b28bd 407 Pfam PF00899 ThiF family 12 244 5.0E-58 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Patl_1936 8b9984faa96b21ea3d4555c2ce8b28bd 407 Gene3D G3DSA:3.40.250.10 309 405 2.3E-15 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Patl_2672 9b8b1e249f942b872e66f43e24b1ab76 239 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 23 215 1.3E-36 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2672 9b8b1e249f942b872e66f43e24b1ab76 239 Gene3D G3DSA:1.20.120.220 73 219 4.7E-33 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2672 9b8b1e249f942b872e66f43e24b1ab76 239 Pfam PF00119 ATP synthase A chain 23 214 6.6E-48 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2672 9b8b1e249f942b872e66f43e24b1ab76 239 PRINTS PR00123 ATP synthase A subunit signature 157 179 3.3E-18 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2672 9b8b1e249f942b872e66f43e24b1ab76 239 PRINTS PR00123 ATP synthase A subunit signature 81 97 3.3E-18 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2672 9b8b1e249f942b872e66f43e24b1ab76 239 PRINTS PR00123 ATP synthase A subunit signature 141 156 3.3E-18 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2672 9b8b1e249f942b872e66f43e24b1ab76 239 PRINTS PR00123 ATP synthase A subunit signature 201 216 3.3E-18 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2672 9b8b1e249f942b872e66f43e24b1ab76 239 SUPERFAMILY SSF81336 76 215 9.02E-37 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2672 9b8b1e249f942b872e66f43e24b1ab76 239 Hamap MF_01393 ATP synthase subunit a [atpB]. 9 221 13.799 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2672 9b8b1e249f942b872e66f43e24b1ab76 239 ProSitePatterns PS00449 ATP synthase a subunit signature. 160 169 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2672 9b8b1e249f942b872e66f43e24b1ab76 239 TIGRFAM TIGR03306 altF1_A: alternate F1F0 ATPase, F0 subunit A 3 218 1.9E-117 T 11-10-2018 IPR017692 Alternate ATP synthase, F0complex, subunit A Patl_3152 35263c0748d5e0f98262c7330e67ea72 167 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 16 147 4.0E-28 T 11-10-2018 Patl_3152 35263c0748d5e0f98262c7330e67ea72 167 PIRSF PIRSF004923 1 159 5.1E-51 T 11-10-2018 IPR026268 Protein RseC Patl_3244 d45a9e0616efaf08228886fb37bd4c54 495 Pfam PF00854 POT family 86 450 1.2E-65 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 Patl_3244 d45a9e0616efaf08228886fb37bd4c54 495 SUPERFAMILY SSF103473 284 487 4.58E-11 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_3244 d45a9e0616efaf08228886fb37bd4c54 495 Gene3D G3DSA:1.20.1250.20 1 495 2.1E-127 T 11-10-2018 Patl_3244 d45a9e0616efaf08228886fb37bd4c54 495 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 74 98 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 Patl_3244 d45a9e0616efaf08228886fb37bd4c54 495 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 482 5.3E-111 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 Patl_3244 d45a9e0616efaf08228886fb37bd4c54 495 SUPERFAMILY SSF103473 14 298 9.29E-21 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_3244 d45a9e0616efaf08228886fb37bd4c54 495 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 147 159 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 Patl_0607 400eeccf5f3869e58c91a4d473fc2a81 206 Gene3D G3DSA:3.10.50.40 68 206 1.6E-53 T 11-10-2018 Patl_0607 400eeccf5f3869e58c91a4d473fc2a81 206 Gene3D G3DSA:1.10.287.460 3 67 1.7E-17 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 Patl_0607 400eeccf5f3869e58c91a4d473fc2a81 206 SUPERFAMILY SSF54534 7 204 2.36E-55 T 11-10-2018 Patl_0607 400eeccf5f3869e58c91a4d473fc2a81 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 4 107 9.4E-24 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 Patl_0607 400eeccf5f3869e58c91a4d473fc2a81 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 115 202 2.1E-28 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Patl_2982 d8473f4ea2a18863ae1dc7d0950c225f 168 Pfam PF11286 Protein of unknown function (DUF3087) 1 165 1.4E-64 T 11-10-2018 IPR021438 Protein of unknown function DUF3087 Patl_2009 a6daaf3e66ce0880c02ef1e80347c3dc 172 SUPERFAMILY SSF54637 4 169 1.49E-57 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_2009 a6daaf3e66ce0880c02ef1e80347c3dc 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 5 172 2.8E-94 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Patl_2009 a6daaf3e66ce0880c02ef1e80347c3dc 172 Pfam PF07977 FabA-like domain 29 159 5.9E-53 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Patl_2009 a6daaf3e66ce0880c02ef1e80347c3dc 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 52.236 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Patl_2009 a6daaf3e66ce0880c02ef1e80347c3dc 172 Gene3D G3DSA:3.10.129.10 3 172 2.5E-66 T 11-10-2018 Patl_1853 58dccc72dc4251f48584f5afc887bb82 155 Pfam PF11695 Domain of unknown function (DUF3291) 3 140 6.5E-58 T 11-10-2018 IPR021708 Domain of unknown function DUF3291 Patl_1853 58dccc72dc4251f48584f5afc887bb82 155 SUPERFAMILY SSF54909 8 114 3.4E-19 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_2756 1474491c58c50ed5081ac95bc09d9d92 741 Gene3D G3DSA:2.40.170.20 57 741 2.3E-137 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_2756 1474491c58c50ed5081ac95bc09d9d92 741 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 174 2.4E-18 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_2756 1474491c58c50ed5081ac95bc09d9d92 741 SUPERFAMILY SSF56935 48 741 1.17E-109 T 11-10-2018 Patl_2756 1474491c58c50ed5081ac95bc09d9d92 741 Pfam PF00593 TonB dependent receptor 220 740 2.1E-34 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_2812 024428bed6e8798fc239864a62770913 247 Hamap MF_00415 Flagellar L-ring protein [flgH]. 2 247 20.966 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Patl_2812 024428bed6e8798fc239864a62770913 247 Pfam PF02107 Flagellar L-ring protein 70 243 1.2E-45 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Patl_2812 024428bed6e8798fc239864a62770913 247 PRINTS PR01008 Flagellar L-ring protein signature 189 205 1.6E-14 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Patl_2812 024428bed6e8798fc239864a62770913 247 PRINTS PR01008 Flagellar L-ring protein signature 163 178 1.6E-14 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Patl_2812 024428bed6e8798fc239864a62770913 247 PRINTS PR01008 Flagellar L-ring protein signature 91 103 1.6E-14 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Patl_2812 024428bed6e8798fc239864a62770913 247 PRINTS PR01008 Flagellar L-ring protein signature 210 224 1.6E-14 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 Patl_4186 35079c0d0a164a0c06ef7249ba7654e1 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 9.6E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_4186 35079c0d0a164a0c06ef7249ba7654e1 195 Pfam PF13305 WHG domain 83 159 1.5E-7 T 11-10-2018 IPR025996 WHG domain Patl_4186 35079c0d0a164a0c06ef7249ba7654e1 195 Gene3D G3DSA:1.10.357.10 3 189 3.3E-34 T 11-10-2018 Patl_4186 35079c0d0a164a0c06ef7249ba7654e1 195 SUPERFAMILY SSF46689 3 66 1.95E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_4186 35079c0d0a164a0c06ef7249ba7654e1 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.8E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_4186 35079c0d0a164a0c06ef7249ba7654e1 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.8E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_4186 35079c0d0a164a0c06ef7249ba7654e1 195 SUPERFAMILY SSF48498 80 185 2.45E-14 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Patl_3435 3dd48e2eba6c35ba1fbbe37239da0699 560 Pfam PF00884 Sulfatase 247 510 3.1E-45 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_3435 3dd48e2eba6c35ba1fbbe37239da0699 560 Gene3D G3DSA:3.40.720.10 232 549 2.0E-79 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_3435 3dd48e2eba6c35ba1fbbe37239da0699 560 Pfam PF08019 Domain of unknown function (DUF1705) 67 219 3.2E-41 T 11-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 Patl_3435 3dd48e2eba6c35ba1fbbe37239da0699 560 SUPERFAMILY SSF53649 247 509 4.11E-16 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_1391 f95363128b5116252f293420f845235f 97 Pfam PF09905 DNA-binding protein VF530 5 67 2.7E-34 T 11-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 Patl_1391 f95363128b5116252f293420f845235f 97 Gene3D G3DSA:1.10.720.30 13 72 2.9E-30 T 11-10-2018 IPR036361 SAP domain superfamily Patl_2292 6510abab43e52843b33841780ef9a3ac 357 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 320 1.8E-69 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Patl_2292 6510abab43e52843b33841780ef9a3ac 357 Gene3D G3DSA:3.40.190.10 149 320 1.4E-128 T 11-10-2018 Patl_2292 6510abab43e52843b33841780ef9a3ac 357 PIRSF PIRSF039026 1 355 2.0E-135 T 11-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like Patl_2292 6510abab43e52843b33841780ef9a3ac 357 Gene3D G3DSA:3.40.190.170 30 341 1.4E-128 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Patl_3805 a9b929ed7632f217ad6d0fb04f8bfa24 615 Pfam PF13387 Domain of unknown function (DUF4105) 114 282 4.7E-46 T 11-10-2018 IPR025178 Domain of unknown function DUF4105 Patl_3105 bd364762c4c0e15ed6ddcd21d32cf06e 142 SUPERFAMILY SSF140566 1 112 6.8E-16 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 Patl_3105 bd364762c4c0e15ed6ddcd21d32cf06e 142 Pfam PF05130 FlgN protein 1 132 2.4E-19 T 11-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 Patl_2732 2f3ae4274ef3022adea104cae1631106 219 SUPERFAMILY SSF52499 22 217 9.81E-38 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Patl_2732 2f3ae4274ef3022adea104cae1631106 219 Pfam PF00857 Isochorismatase family 31 211 5.7E-29 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 Patl_2732 2f3ae4274ef3022adea104cae1631106 219 Gene3D G3DSA:3.40.50.850 11 219 1.2E-51 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Patl_4156 0ce75d2a82f9603e11127ed23a578a6b 443 SUPERFAMILY SSF52172 4 179 2.7E-26 T 11-10-2018 IPR011006 CheY-like superfamily Patl_4156 0ce75d2a82f9603e11127ed23a578a6b 443 SUPERFAMILY SSF46689 345 437 1.43E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_4156 0ce75d2a82f9603e11127ed23a578a6b 443 SMART SM00448 2 113 5.3E-10 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4156 0ce75d2a82f9603e11127ed23a578a6b 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 440 6.3E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_4156 0ce75d2a82f9603e11127ed23a578a6b 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 403 420 6.3E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_4156 0ce75d2a82f9603e11127ed23a578a6b 443 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 346 355 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Patl_4156 0ce75d2a82f9603e11127ed23a578a6b 443 Gene3D G3DSA:1.10.8.60 306 375 1.6E-18 T 11-10-2018 Patl_4156 0ce75d2a82f9603e11127ed23a578a6b 443 SUPERFAMILY SSF52540 135 365 2.18E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_4156 0ce75d2a82f9603e11127ed23a578a6b 443 Pfam PF00158 Sigma-54 interaction domain 135 300 2.3E-61 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Patl_4156 0ce75d2a82f9603e11127ed23a578a6b 443 Gene3D G3DSA:3.40.50.2300 2 120 3.3E-20 T 11-10-2018 Patl_4156 0ce75d2a82f9603e11127ed23a578a6b 443 Gene3D G3DSA:3.40.50.300 121 305 3.9E-57 T 11-10-2018 Patl_4156 0ce75d2a82f9603e11127ed23a578a6b 443 SMART SM00382 155 297 1.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_4156 0ce75d2a82f9603e11127ed23a578a6b 443 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 159 172 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Patl_4156 0ce75d2a82f9603e11127ed23a578a6b 443 Pfam PF00072 Response regulator receiver domain 4 110 5.8E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_4156 0ce75d2a82f9603e11127ed23a578a6b 443 Pfam PF02954 Bacterial regulatory protein, Fis family 397 436 8.4E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Patl_4156 0ce75d2a82f9603e11127ed23a578a6b 443 Gene3D G3DSA:1.10.10.60 376 440 9.7E-14 T 11-10-2018 Patl_3473 145ca30b79f5358a2b66c7e2d1555bbd 422 Pfam PF05940 NnrS protein 39 416 3.9E-92 T 11-10-2018 IPR010266 NnrS Patl_2708 67c50fa7012e4f57b7d78b4ac49a8d17 103 Pfam PF07110 EthD domain 18 92 3.3E-8 T 11-10-2018 IPR009799 EthD domain Patl_2708 67c50fa7012e4f57b7d78b4ac49a8d17 103 Gene3D G3DSA:3.30.70.100 2 100 7.0E-30 T 11-10-2018 Patl_2708 67c50fa7012e4f57b7d78b4ac49a8d17 103 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 1 102 1.9E-27 T 11-10-2018 IPR009799 EthD domain Patl_2708 67c50fa7012e4f57b7d78b4ac49a8d17 103 SUPERFAMILY SSF54909 1 101 2.28E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_2323 5e446973b5bb795a5c0a2767025ca4d3 114 Gene3D G3DSA:2.60.120.10 11 111 7.0E-13 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_2323 5e446973b5bb795a5c0a2767025ca4d3 114 Pfam PF07883 Cupin domain 40 107 8.8E-9 T 11-10-2018 IPR013096 Cupin 2, conserved barrel Patl_2323 5e446973b5bb795a5c0a2767025ca4d3 114 SUPERFAMILY SSF51182 6 111 3.06E-16 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_1643 10a1623ab9d6fa527a71e42ef7a80337 108 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 62 1.0E-31 T 11-10-2018 Patl_2178 de11132f3d361c521948779508d42f10 253 Gene3D G3DSA:3.40.1390.30 8 239 1.9E-76 T 11-10-2018 Patl_2178 de11132f3d361c521948779508d42f10 253 Gene3D G3DSA:3.40.1390.30 99 224 1.9E-76 T 11-10-2018 Patl_2178 de11132f3d361c521948779508d42f10 253 SUPERFAMILY SSF102705 3 252 5.1E-78 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Patl_2178 de11132f3d361c521948779508d42f10 253 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 239 1.9E-60 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Patl_2178 de11132f3d361c521948779508d42f10 253 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 6 252 1.2E-63 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Patl_0938 4b6129c7ce121c42bcb467d4340819d3 174 Pfam PF13474 SnoaL-like domain 38 152 1.4E-27 T 11-10-2018 IPR037401 SnoaL-like domain Patl_0938 4b6129c7ce121c42bcb467d4340819d3 174 Gene3D G3DSA:3.10.450.50 21 151 2.7E-11 T 11-10-2018 Patl_0938 4b6129c7ce121c42bcb467d4340819d3 174 SUPERFAMILY SSF54427 29 153 1.27E-15 T 11-10-2018 IPR032710 NTF2-like domain superfamily Patl_0093 808987c1e20d2b1f53d0fc2e14fe8d6a 170 SUPERFAMILY SSF46785 6 141 2.25E-38 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0093 808987c1e20d2b1f53d0fc2e14fe8d6a 170 Pfam PF01638 HxlR-like helix-turn-helix 20 104 4.0E-19 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type Patl_0093 808987c1e20d2b1f53d0fc2e14fe8d6a 170 Gene3D G3DSA:1.10.10.10 2 159 7.6E-43 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_2947 47d390e8af1647ba440f841b4a46f60b 127 Gene3D G3DSA:3.90.79.10 1 123 4.1E-28 T 11-10-2018 Patl_2947 47d390e8af1647ba440f841b4a46f60b 127 SUPERFAMILY SSF55811 2 119 3.25E-17 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Patl_2947 47d390e8af1647ba440f841b4a46f60b 127 Pfam PF00293 NUDIX domain 2 112 2.3E-10 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Patl_2947 47d390e8af1647ba440f841b4a46f60b 127 ProSitePatterns PS00893 Nudix box signature. 15 36 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Patl_1984 8d7902ff21b933871dfb094f715f7cd9 100 Pfam PF02371 Transposase IS116/IS110/IS902 family 6 57 2.1E-11 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Patl_0254 180faed1857144148966f5b3ef47cd14 144 SUPERFAMILY SSF46458 28 142 1.5E-27 T 11-10-2018 IPR009050 Globin-like superfamily Patl_0254 180faed1857144148966f5b3ef47cd14 144 Gene3D G3DSA:1.10.490.10 18 143 1.3E-34 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Patl_0254 180faed1857144148966f5b3ef47cd14 144 Pfam PF01152 Bacterial-like globin 29 141 7.3E-15 T 11-10-2018 IPR001486 Truncated hemoglobin GO:0019825 Patl_3003 1f4dad1fb1540c956b25c2dca9d9f35c 78 Pfam PF06667 Phage shock protein B 7 76 2.0E-33 T 11-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 Patl_3003 1f4dad1fb1540c956b25c2dca9d9f35c 78 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 7 77 1.1E-28 T 11-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 Patl_1687 5a22bcb656e5558ef41dc15020eaf3b9 440 SUPERFAMILY SSF53383 46 438 4.44E-65 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_1687 5a22bcb656e5558ef41dc15020eaf3b9 440 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 259 279 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Patl_1687 5a22bcb656e5558ef41dc15020eaf3b9 440 Gene3D G3DSA:3.90.1150.10 68 430 4.2E-73 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_1687 5a22bcb656e5558ef41dc15020eaf3b9 440 Gene3D G3DSA:3.40.640.10 72 345 4.2E-73 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_1687 5a22bcb656e5558ef41dc15020eaf3b9 440 Pfam PF00266 Aminotransferase class-V 71 408 5.3E-41 T 11-10-2018 IPR000192 Aminotransferase class V domain Patl_1713 9a26d9d78f1aadcafa45b0a19b977231 118 Gene3D G3DSA:3.30.1450.10 30 115 1.5E-22 T 11-10-2018 IPR037873 BamE-like Patl_1713 9a26d9d78f1aadcafa45b0a19b977231 118 Pfam PF04355 SmpA / OmlA family 31 101 4.0E-23 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 Patl_1713 9a26d9d78f1aadcafa45b0a19b977231 118 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 3 110 25.629 T 11-10-2018 IPR026592 Outer membrane protein assembly factor BamE Patl_3193 659a83da809cefe02629e7d129893e5f 279 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 22 131 8.6E-46 T 11-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Patl_3193 659a83da809cefe02629e7d129893e5f 279 TIGRFAM TIGR03138 QueF: queuine synthase 11 279 1.4E-124 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Patl_3193 659a83da809cefe02629e7d129893e5f 279 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 279 149.32 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Patl_3193 659a83da809cefe02629e7d129893e5f 279 Gene3D G3DSA:3.30.1130.10 22 138 2.8E-42 T 11-10-2018 Patl_3193 659a83da809cefe02629e7d129893e5f 279 SUPERFAMILY SSF55620 184 263 2.15E-9 T 11-10-2018 Patl_3193 659a83da809cefe02629e7d129893e5f 279 Pfam PF14489 QueF-like protein 193 266 2.3E-27 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Patl_3193 659a83da809cefe02629e7d129893e5f 279 PIRSF PIRSF004750 8 279 1.8E-121 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Patl_3193 659a83da809cefe02629e7d129893e5f 279 Gene3D G3DSA:3.30.1130.10 144 279 4.7E-59 T 11-10-2018 Patl_3484 d683eba6849a5f5cb372b914e5f55c7f 288 Pfam PF00892 EamA-like transporter family 11 137 3.4E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Patl_3484 d683eba6849a5f5cb372b914e5f55c7f 288 Pfam PF00892 EamA-like transporter family 148 276 4.8E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Patl_3484 d683eba6849a5f5cb372b914e5f55c7f 288 SUPERFAMILY SSF103481 41 137 4.05E-7 T 11-10-2018 Patl_3484 d683eba6849a5f5cb372b914e5f55c7f 288 SUPERFAMILY SSF103481 187 277 2.75E-11 T 11-10-2018 Patl_0872 5ca789295f17b3e5bb972b34ff531c31 225 Gene3D G3DSA:1.20.1050.10 83 194 4.2E-55 T 11-10-2018 Patl_0872 5ca789295f17b3e5bb972b34ff531c31 225 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 75 1.3E-13 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Patl_0872 5ca789295f17b3e5bb972b34ff531c31 225 Gene3D G3DSA:3.40.30.10 6 202 4.2E-55 T 11-10-2018 Patl_0872 5ca789295f17b3e5bb972b34ff531c31 225 SUPERFAMILY SSF47616 81 201 1.29E-17 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily Patl_0872 5ca789295f17b3e5bb972b34ff531c31 225 Pfam PF00043 Glutathione S-transferase, C-terminal domain 107 195 1.5E-6 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal Patl_0872 5ca789295f17b3e5bb972b34ff531c31 225 SUPERFAMILY SSF52833 4 81 7.34E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_1286 2a2bbb2bcd76566cb255bf92c1cea110 136 Gene3D G3DSA:2.170.150.70 3 120 8.0E-12 T 11-10-2018 Patl_1286 2a2bbb2bcd76566cb255bf92c1cea110 136 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 116 8.7E-21 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 Patl_1286 2a2bbb2bcd76566cb255bf92c1cea110 136 SUPERFAMILY SSF51316 1 135 3.24E-34 T 11-10-2018 IPR011057 Mss4-like superfamily Patl_1591 ddd1abab705eff2e20f03c9223271862 266 Gene3D G3DSA:3.40.50.2300 7 137 6.5E-21 T 11-10-2018 Patl_1591 ddd1abab705eff2e20f03c9223271862 266 Pfam PF00072 Response regulator receiver domain 11 123 1.3E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1591 ddd1abab705eff2e20f03c9223271862 266 Pfam PF00072 Response regulator receiver domain 147 257 6.4E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1591 ddd1abab705eff2e20f03c9223271862 266 SMART SM00448 9 123 7.7E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1591 ddd1abab705eff2e20f03c9223271862 266 SMART SM00448 145 260 3.4E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_1591 ddd1abab705eff2e20f03c9223271862 266 Gene3D G3DSA:3.40.50.2300 138 260 1.5E-29 T 11-10-2018 Patl_1591 ddd1abab705eff2e20f03c9223271862 266 SUPERFAMILY SSF52172 144 265 1.42E-29 T 11-10-2018 IPR011006 CheY-like superfamily Patl_1591 ddd1abab705eff2e20f03c9223271862 266 SUPERFAMILY SSF52172 8 129 6.55E-22 T 11-10-2018 IPR011006 CheY-like superfamily Patl_2736 710d81756da769a00d37a1236f72ccee 146 Gene3D G3DSA:3.40.630.30 2 131 2.0E-36 T 11-10-2018 Patl_2736 710d81756da769a00d37a1236f72ccee 146 SUPERFAMILY SSF55729 12 124 1.1E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_2736 710d81756da769a00d37a1236f72ccee 146 Pfam PF13508 Acetyltransferase (GNAT) domain 48 123 5.8E-8 T 11-10-2018 IPR000182 GNAT domain Patl_3569 1fdbb83a35cf1a9ddc6898892134d52f 292 Pfam PF06629 MltA-interacting protein MipA 46 291 2.4E-55 T 11-10-2018 IPR010583 MltA-interacting MipA Patl_3061 850381c4e254f93cf867b05a11cba981 187 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 23 178 3.0E-89 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Patl_3061 850381c4e254f93cf867b05a11cba981 187 Gene3D G3DSA:2.60.120.10 7 184 3.1E-53 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_3061 850381c4e254f93cf867b05a11cba981 187 SUPERFAMILY SSF51182 6 179 1.78E-57 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_3061 850381c4e254f93cf867b05a11cba981 187 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 9 177 9.8E-53 T 11-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Patl_1539 c971f7ede8e2d4662e88a38907f2b479 186 Pfam PF01713 Smr domain 103 177 8.4E-20 T 11-10-2018 IPR002625 Smr domain Patl_1539 c971f7ede8e2d4662e88a38907f2b479 186 SUPERFAMILY SSF160443 101 177 1.02E-12 T 11-10-2018 IPR036063 Smr domain superfamily Patl_1539 c971f7ede8e2d4662e88a38907f2b479 186 SMART SM00463 100 178 7.9E-14 T 11-10-2018 IPR002625 Smr domain Patl_1539 c971f7ede8e2d4662e88a38907f2b479 186 Gene3D G3DSA:3.30.1370.110 54 181 2.4E-27 T 11-10-2018 Patl_4112 ad5ebfb1432d9b673b4f6815926e7d25 400 SUPERFAMILY SSF56935 30 400 5.49E-21 T 11-10-2018 Patl_2935 cfe1ff8c29af3c7d9afc6f5da1e2174d 270 Gene3D G3DSA:3.10.129.90 5 269 1.8E-74 T 11-10-2018 Patl_2935 cfe1ff8c29af3c7d9afc6f5da1e2174d 270 SUPERFAMILY SSF54637 129 268 3.49E-25 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_2935 cfe1ff8c29af3c7d9afc6f5da1e2174d 270 SUPERFAMILY SSF54637 13 116 1.04E-24 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_2935 cfe1ff8c29af3c7d9afc6f5da1e2174d 270 Pfam PF13622 Thioesterase-like superfamily 27 268 2.4E-48 T 11-10-2018 Patl_3293 ebb25dc05bc36d8e069c9fd4283d1d87 237 Pfam PF04172 LrgB-like family 21 233 1.1E-62 T 11-10-2018 IPR007300 CidB/LrgB family Patl_0549 fa4b8d434882dc7940be510d75acb682 329 SUPERFAMILY SSF53167 34 302 1.22E-41 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Patl_0549 fa4b8d434882dc7940be510d75acb682 329 Pfam PF01048 Phosphorylase superfamily 33 320 1.2E-49 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Patl_0374 3de64c807e24670c28a928e96302391f 228 SUPERFAMILY SSF102198 9 223 1.57E-49 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Patl_0374 3de64c807e24670c28a928e96302391f 228 Gene3D G3DSA:3.50.30.50 5 223 1.2E-53 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Patl_0374 3de64c807e24670c28a928e96302391f 228 Pfam PF04199 Putative cyclase 12 165 2.2E-21 T 11-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 Patl_1123 1042316e85c3f207b6765123b08a7e4b 437 SUPERFAMILY SSF56529 131 435 7.06E-95 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Patl_1123 1042316e85c3f207b6765123b08a7e4b 437 Pfam PF09298 Fumarylacetoacetase N-terminal 28 129 9.7E-22 T 11-10-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 Patl_1123 1042316e85c3f207b6765123b08a7e4b 437 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 14 435 3.1E-162 T 11-10-2018 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 Patl_1123 1042316e85c3f207b6765123b08a7e4b 437 Gene3D G3DSA:2.30.30.230 1 125 6.0E-29 T 11-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 Patl_1123 1042316e85c3f207b6765123b08a7e4b 437 Gene3D G3DSA:3.90.850.10 127 437 4.2E-115 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Patl_1123 1042316e85c3f207b6765123b08a7e4b 437 SUPERFAMILY SSF63433 14 129 1.44E-28 T 11-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 Patl_1123 1042316e85c3f207b6765123b08a7e4b 437 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 135 432 4.0E-51 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Patl_2902 08295765a2d22e3b4cb1e5735e382e2c 413 Gene3D G3DSA:3.40.710.10 124 387 3.4E-80 T 11-10-2018 Patl_2902 08295765a2d22e3b4cb1e5735e382e2c 413 SUPERFAMILY SSF56601 60 403 1.33E-70 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Patl_2902 08295765a2d22e3b4cb1e5735e382e2c 413 Gene3D G3DSA:1.20.58.710 170 266 3.4E-80 T 11-10-2018 Patl_2902 08295765a2d22e3b4cb1e5735e382e2c 413 Pfam PF00144 Beta-lactamase 125 388 3.7E-31 T 11-10-2018 IPR001466 Beta-lactamase-related Patl_1629 0db15a517443310a358c4649ce26f234 518 Pfam PF02646 RmuC family 184 479 4.5E-107 T 11-10-2018 IPR003798 DNA recombination RmuC Patl_1990 171979388b5111a395127c0ef96df881 154 Gene3D G3DSA:3.30.450.40 3 154 1.1E-60 T 11-10-2018 IPR029016 GAF-like domain superfamily Patl_1990 171979388b5111a395127c0ef96df881 154 SUPERFAMILY SSF55781 3 153 5.23E-40 T 11-10-2018 Patl_1990 171979388b5111a395127c0ef96df881 154 Pfam PF13185 GAF domain 45 153 1.5E-11 T 11-10-2018 IPR003018 GAF domain GO:0005515 Patl_4015 8cbe654d56666ad1098f748658e7cf08 151 Gene3D G3DSA:3.30.70.330 52 151 9.9E-28 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Patl_4015 8cbe654d56666ad1098f748658e7cf08 151 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 72 141 3.5E-18 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 Patl_4015 8cbe654d56666ad1098f748658e7cf08 151 SUPERFAMILY SSF54928 59 148 4.75E-27 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 Patl_4015 8cbe654d56666ad1098f748658e7cf08 151 SMART SM00360 71 143 5.5E-22 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 Patl_0828 d524198b636f51972a2f70a23e8ce90e 500 SUPERFAMILY SSF52266 62 272 1.35E-36 T 11-10-2018 Patl_0828 d524198b636f51972a2f70a23e8ce90e 500 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 68 263 1.7E-20 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain Patl_0828 d524198b636f51972a2f70a23e8ce90e 500 Gene3D G3DSA:3.40.50.1110 58 278 3.0E-54 T 11-10-2018 IPR036514 SGNH hydrolase superfamily Patl_3339 fbd7205b381f8dd3c3d6572a8549677d 76 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 56 15.935 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 Patl_3339 fbd7205b381f8dd3c3d6572a8549677d 76 Gene3D G3DSA:3.30.50.10 1 59 1.7E-21 T 11-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 Patl_3339 fbd7205b381f8dd3c3d6572a8549677d 76 SUPERFAMILY SSF57716 2 52 1.71E-18 T 11-10-2018 Patl_3339 fbd7205b381f8dd3c3d6572a8549677d 76 Pfam PF03884 DNA gyrase inhibitor YacG 3 52 9.4E-24 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 Patl_2427 15f12720133c4016944d18498523a413 139 Pfam PF09349 OHCU decarboxylase 4 132 2.7E-29 T 11-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Patl_2427 15f12720133c4016944d18498523a413 139 Gene3D G3DSA:1.10.3330.10 1 139 5.6E-43 T 11-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Patl_2427 15f12720133c4016944d18498523a413 139 SUPERFAMILY SSF158694 2 137 2.22E-35 T 11-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 Patl_0876 3175d779391ce6f8397f0415f0865966 328 SUPERFAMILY SSF56281 37 325 4.85E-48 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_0876 3175d779391ce6f8397f0415f0865966 328 Gene3D G3DSA:3.60.15.10 31 328 9.4E-55 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Patl_0876 3175d779391ce6f8397f0415f0865966 328 SMART SM00849 50 248 3.5E-16 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_0876 3175d779391ce6f8397f0415f0865966 328 Pfam PF12706 Beta-lactamase superfamily domain 59 290 1.2E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase Patl_0807 aa805e88f31aa11f07bab32b83ac42d3 499 SUPERFAMILY SSF51905 2 429 1.62E-22 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0807 aa805e88f31aa11f07bab32b83ac42d3 499 Pfam PF04820 Tryptophan halogenase 6 459 9.2E-140 T 11-10-2018 IPR006905 Flavin-dependent halogenase Patl_0807 aa805e88f31aa11f07bab32b83ac42d3 499 PIRSF PIRSF011396 1 499 9.6E-192 T 11-10-2018 IPR033856 Flavin-dependent tryptophan halogenase Patl_0807 aa805e88f31aa11f07bab32b83ac42d3 499 Gene3D G3DSA:3.50.50.60 1 499 8.7E-159 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3208 a63b078ba1e1261ac3cd836a4b9ed315 365 Gene3D G3DSA:3.40.50.300 2 260 1.8E-10 T 11-10-2018 Patl_3208 a63b078ba1e1261ac3cd836a4b9ed315 365 SUPERFAMILY SSF52540 5 167 2.17E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2219 07cfd67fe12ec62d11cf3751a292be14 229 SUPERFAMILY SSF81342 4 187 1.65E-34 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Patl_2219 07cfd67fe12ec62d11cf3751a292be14 229 Pfam PF01292 Prokaryotic cytochrome b561 8 183 2.8E-20 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Patl_2219 07cfd67fe12ec62d11cf3751a292be14 229 Gene3D G3DSA:1.20.950.20 2 172 1.4E-16 T 11-10-2018 Patl_0025 1653e7c6e366063bc88d1cb9a8d13d7e 379 SUPERFAMILY SSF102405 95 298 8.61E-40 T 11-10-2018 Patl_0025 1653e7c6e366063bc88d1cb9a8d13d7e 379 Pfam PF02481 DNA recombination-mediator protein A 86 291 6.0E-76 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Patl_0025 1653e7c6e366063bc88d1cb9a8d13d7e 379 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 81 298 3.6E-78 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Patl_0025 1653e7c6e366063bc88d1cb9a8d13d7e 379 Gene3D G3DSA:3.40.50.450 2 303 1.6E-94 T 11-10-2018 Patl_0888 866a85ae72adc1abbc275808c3e81cc8 517 Gene3D G3DSA:3.40.720.10 34 503 1.1E-108 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Patl_0888 866a85ae72adc1abbc275808c3e81cc8 517 Pfam PF00884 Sulfatase 35 386 7.6E-53 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 Patl_0888 866a85ae72adc1abbc275808c3e81cc8 517 Pfam PF16347 Domain of unknown function (DUF4976) 393 487 1.1E-7 T 11-10-2018 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 Patl_0888 866a85ae72adc1abbc275808c3e81cc8 517 ProSitePatterns PS00523 Sulfatases signature 1. 80 92 - T 11-10-2018 IPR024607 Sulfatase, conserved site Patl_0888 866a85ae72adc1abbc275808c3e81cc8 517 SUPERFAMILY SSF53649 33 491 1.32E-103 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_3489 dca44356e404566a155a249808270383 586 Pfam PF05960 Bacterial protein of unknown function (DUF885) 64 574 2.8E-150 T 11-10-2018 IPR010281 Protein of unknown function DUF885 Patl_3825 bb5a14314762568a4703e6ae087f68f1 64 PIRSF PIRSF037225 3 64 9.0E-20 T 11-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 Patl_3825 bb5a14314762568a4703e6ae087f68f1 64 Pfam PF14255 Cysteine-rich CPXCG 10 54 1.1E-14 T 11-10-2018 IPR025990 Cysteine-rich CPXCG protein Patl_1320 1c9cba721857e8f5053fa6fe448b7267 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site Patl_1320 1c9cba721857e8f5053fa6fe448b7267 296 Gene3D G3DSA:1.10.600.10 2 296 2.1E-94 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Patl_1320 1c9cba721857e8f5053fa6fe448b7267 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site Patl_1320 1c9cba721857e8f5053fa6fe448b7267 296 Pfam PF00348 Polyprenyl synthetase 31 260 7.1E-57 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Patl_1320 1c9cba721857e8f5053fa6fe448b7267 296 SUPERFAMILY SSF48576 1 286 7.61E-84 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily Patl_2916 ec873b0f5e03ef4d201cd399daffb5c1 401 Pfam PF05987 Bacterial protein of unknown function (DUF898) 63 392 5.4E-106 T 11-10-2018 IPR010295 Protein of unknown function DUF898 Patl_2530 a12c50d247944026e0200690e63ca5a0 361 Pfam PF02885 Glycosyl transferase family, helical bundle domain 25 78 5.5E-15 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Patl_2530 a12c50d247944026e0200690e63ca5a0 361 SUPERFAMILY SSF52418 87 336 9.94E-46 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Patl_2530 a12c50d247944026e0200690e63ca5a0 361 Gene3D G3DSA:3.40.1030.10 83 340 3.8E-49 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Patl_2530 a12c50d247944026e0200690e63ca5a0 361 SUPERFAMILY SSF47648 20 80 1.44E-15 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Patl_2530 a12c50d247944026e0200690e63ca5a0 361 Gene3D G3DSA:1.20.970.10 11 80 4.4E-20 T 11-10-2018 Patl_0500 74428a7029f1c62660b474b6fb6317c0 150 SUPERFAMILY SSF54909 66 149 6.97E-19 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel Patl_0500 74428a7029f1c62660b474b6fb6317c0 150 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site Patl_0500 74428a7029f1c62660b474b6fb6317c0 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 7.0E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_0500 74428a7029f1c62660b474b6fb6317c0 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 7.0E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_0500 74428a7029f1c62660b474b6fb6317c0 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 7.0E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Patl_0500 74428a7029f1c62660b474b6fb6317c0 150 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 51 2.1E-15 T 11-10-2018 Patl_0500 74428a7029f1c62660b474b6fb6317c0 150 Gene3D G3DSA:1.10.10.10 5 56 2.0E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_0500 74428a7029f1c62660b474b6fb6317c0 150 Gene3D G3DSA:3.30.70.920 57 140 7.4E-21 T 11-10-2018 Patl_0500 74428a7029f1c62660b474b6fb6317c0 150 SUPERFAMILY SSF46785 5 63 8.44E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0500 74428a7029f1c62660b474b6fb6317c0 150 Pfam PF01037 Lrp/AsnC ligand binding domain 72 143 1.9E-18 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Patl_0500 74428a7029f1c62660b474b6fb6317c0 150 SMART SM00344 5 113 1.2E-34 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Patl_0687 4b2e370ceb21a88f785fc1ed31fa88a0 256 SUPERFAMILY SSF54060 152 220 3.18E-11 T 11-10-2018 Patl_0687 4b2e370ceb21a88f785fc1ed31fa88a0 256 Pfam PF13392 HNH endonuclease 180 222 5.5E-15 T 11-10-2018 IPR003615 HNH nuclease Patl_3728 637f9b24b806d3a9e1e89beebfc577ed 383 Gene3D G3DSA:2.115.10.20 44 381 1.5E-104 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Patl_3728 637f9b24b806d3a9e1e89beebfc577ed 383 Pfam PF04616 Glycosyl hydrolases family 43 131 375 1.4E-28 T 11-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 Patl_3728 637f9b24b806d3a9e1e89beebfc577ed 383 SUPERFAMILY SSF75005 66 376 9.14E-60 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Patl_3332 14717cb7d8412c1ea679285e6b09287e 268 Gene3D G3DSA:3.30.2010.10 56 144 2.4E-6 T 11-10-2018 Patl_3332 14717cb7d8412c1ea679285e6b09287e 268 Pfam PF01435 Peptidase family M48 81 247 2.8E-39 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Patl_0299 bbf32dd42ef1755d0017906869983104 415 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 21 225 6.4E-56 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Patl_0299 bbf32dd42ef1755d0017906869983104 415 SMART SM00833 271 388 6.7E-46 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Patl_0299 bbf32dd42ef1755d0017906869983104 415 Gene3D G3DSA:3.40.50.300 17 244 1.1E-68 T 11-10-2018 Patl_0299 bbf32dd42ef1755d0017906869983104 415 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 271 388 5.1E-27 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal Patl_0299 bbf32dd42ef1755d0017906869983104 415 SUPERFAMILY SSF52540 16 323 1.7E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2439 d114c6d45eff3f1a257c66ddf43290a8 141 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 50 124 1.8E-17 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 Patl_2439 d114c6d45eff3f1a257c66ddf43290a8 141 Gene3D G3DSA:3.30.1150.10 30 126 1.4E-14 T 11-10-2018 Patl_2439 d114c6d45eff3f1a257c66ddf43290a8 141 SUPERFAMILY SSF74653 43 124 1.27E-18 T 11-10-2018 Patl_1292 70c676b354c528f6536c6bd7a907757c 214 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 35 214 1.5E-81 T 11-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 Patl_1292 70c676b354c528f6536c6bd7a907757c 214 Pfam PF00510 Cytochrome c oxidase subunit III 36 212 7.8E-15 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1292 70c676b354c528f6536c6bd7a907757c 214 Gene3D G3DSA:1.20.120.80 29 214 3.8E-55 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1292 70c676b354c528f6536c6bd7a907757c 214 SUPERFAMILY SSF81452 25 212 3.01E-56 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_3429 774d1c254ed89da4dc07dacdba94afe9 358 SUPERFAMILY SSF63829 17 351 1.01E-44 T 11-10-2018 Patl_3429 774d1c254ed89da4dc07dacdba94afe9 358 Gene3D G3DSA:2.120.10.30 46 357 3.4E-69 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Patl_3429 774d1c254ed89da4dc07dacdba94afe9 358 Pfam PF03088 Strictosidine synthase 147 241 2.5E-23 T 11-10-2018 IPR018119 Strictosidine synthase, conserved region GO:0009058|GO:0016844 Patl_0555 f9816d465ff714d05edb94b5ea9012cd 419 Gene3D G3DSA:3.65.10.10 21 230 1.2E-168 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Patl_0555 f9816d465ff714d05edb94b5ea9012cd 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 408 3.1E-117 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Patl_0555 f9816d465ff714d05edb94b5ea9012cd 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 417 1.5E-180 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_0555 f9816d465ff714d05edb94b5ea9012cd 419 Gene3D G3DSA:3.65.10.10 6 415 1.2E-168 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Patl_0555 f9816d465ff714d05edb94b5ea9012cd 419 SUPERFAMILY SSF55205 1 418 2.62E-143 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Patl_0555 f9816d465ff714d05edb94b5ea9012cd 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 44.358 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Patl_4144 215eba59202f6d7191283f7f90e4986b 472 Gene3D G3DSA:1.20.1530.10 299 453 9.2E-40 T 11-10-2018 IPR023171 Na/H antiporter domain superfamily Patl_4144 215eba59202f6d7191283f7f90e4986b 472 Gene3D G3DSA:1.20.1530.10 23 286 3.7E-82 T 11-10-2018 IPR023171 Na/H antiporter domain superfamily Patl_4144 215eba59202f6d7191283f7f90e4986b 472 Pfam PF06965 Na+/H+ antiporter 1 27 444 3.0E-127 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Patl_4144 215eba59202f6d7191283f7f90e4986b 472 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 25 451 20.787 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Patl_4144 215eba59202f6d7191283f7f90e4986b 472 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 28 444 7.4E-109 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 Patl_1040 cdbad9fc2e5f7738c2e315a35ff9d891 147 SUPERFAMILY SSF89095 1 146 9.94E-42 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Patl_1040 cdbad9fc2e5f7738c2e315a35ff9d891 147 Pfam PF09424 Yqey-like protein 5 146 1.4E-53 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 Patl_1040 cdbad9fc2e5f7738c2e315a35ff9d891 147 Gene3D G3DSA:1.10.1510.10 1 90 1.9E-27 T 11-10-2018 Patl_1040 cdbad9fc2e5f7738c2e315a35ff9d891 147 Gene3D G3DSA:1.10.10.410 91 147 4.8E-17 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Patl_2336 e515082ce660556f9147510bef02740c 111 Pfam PF05901 Excalibur calcium-binding domain 72 106 8.1E-10 T 11-10-2018 IPR008613 Excalibur calcium-binding domain Patl_2336 e515082ce660556f9147510bef02740c 111 SMART SM00894 71 106 0.0066 T 11-10-2018 IPR008613 Excalibur calcium-binding domain Patl_1062 e8aeca81ba8d3f31bfc4a761d1246d56 173 Pfam PF01618 MotA/TolQ/ExbB proton channel family 61 165 2.5E-20 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Patl_0634 e13ca5e3f4bbea258fd3e0a3354c6a92 370 SUPERFAMILY SSF56112 28 360 1.04E-52 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily Patl_0634 e13ca5e3f4bbea258fd3e0a3354c6a92 370 Gene3D G3DSA:3.30.200.20 27 133 2.3E-23 T 11-10-2018 Patl_0634 e13ca5e3f4bbea258fd3e0a3354c6a92 370 Pfam PF01636 Phosphotransferase enzyme family 50 288 4.7E-37 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase Patl_0634 e13ca5e3f4bbea258fd3e0a3354c6a92 370 Gene3D G3DSA:3.90.1200.10 136 367 1.0E-61 T 11-10-2018 Patl_4173 be95dd490cd66312ace368d8bb4b33fc 327 Gene3D G3DSA:3.40.50.10490 187 312 2.1E-32 T 11-10-2018 Patl_4173 be95dd490cd66312ace368d8bb4b33fc 327 SUPERFAMILY SSF53697 1 325 1.06E-64 T 11-10-2018 Patl_4173 be95dd490cd66312ace368d8bb4b33fc 327 Gene3D G3DSA:3.40.50.10490 1 186 1.3E-50 T 11-10-2018 Patl_4173 be95dd490cd66312ace368d8bb4b33fc 327 Pfam PF01380 SIS domain 194 280 1.9E-8 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Patl_4173 be95dd490cd66312ace368d8bb4b33fc 327 Pfam PF01380 SIS domain 38 158 8.5E-19 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Patl_0180 231b1f12024dd5636cc8db1f3773377f 280 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 31 1.6E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0180 231b1f12024dd5636cc8db1f3773377f 280 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 32 2.0E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0180 231b1f12024dd5636cc8db1f3773377f 280 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_0056 aa36aa8959821e6c5f6ab8a07effb339 358 Gene3D G3DSA:3.40.50.2000 152 341 5.1E-47 T 11-10-2018 Patl_0056 aa36aa8959821e6c5f6ab8a07effb339 358 Gene3D G3DSA:3.40.50.2000 63 352 5.1E-47 T 11-10-2018 Patl_0056 aa36aa8959821e6c5f6ab8a07effb339 358 Pfam PF00534 Glycosyl transferases group 1 174 335 3.0E-30 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Patl_0056 aa36aa8959821e6c5f6ab8a07effb339 358 SUPERFAMILY SSF53756 50 356 1.37E-56 T 11-10-2018 Patl_1245 4e950eec92b24594472467fa0431afe4 591 SUPERFAMILY SSF69593 65 258 4.71E-13 T 11-10-2018 Patl_1245 4e950eec92b24594472467fa0431afe4 591 SMART SM00563 81 198 3.1E-5 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Patl_1245 4e950eec92b24594472467fa0431afe4 591 Pfam PF13444 Acetyltransferase (GNAT) domain 325 425 1.2E-22 T 11-10-2018 Patl_1245 4e950eec92b24594472467fa0431afe4 591 Pfam PF01553 Acyltransferase 68 195 1.1E-10 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Patl_1245 4e950eec92b24594472467fa0431afe4 591 SUPERFAMILY SSF55729 307 464 1.06E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_3815 671862393673325e05d5c84f4a57c5d6 408 Pfam PF01566 Natural resistance-associated macrophage protein 30 379 1.2E-85 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Patl_3815 671862393673325e05d5c84f4a57c5d6 408 PRINTS PR00447 Natural resistance-associated macrophage protein signature 194 217 3.8E-7 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Patl_3815 671862393673325e05d5c84f4a57c5d6 408 PRINTS PR00447 Natural resistance-associated macrophage protein signature 145 166 3.8E-7 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Patl_3815 671862393673325e05d5c84f4a57c5d6 408 PRINTS PR00447 Natural resistance-associated macrophage protein signature 290 309 3.8E-7 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Patl_0966 0def2ac39e8bf89af03f015a223b6bce 394 SUPERFAMILY SSF51735 12 164 8.25E-16 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0966 0def2ac39e8bf89af03f015a223b6bce 394 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 12 141 1.9E-15 T 11-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 Patl_0966 0def2ac39e8bf89af03f015a223b6bce 394 Gene3D G3DSA:3.40.50.720 11 178 7.1E-37 T 11-10-2018 Patl_1374 45f4f3bf648e9e81808bf0b204fcf598 116 Pfam PF03928 Haem-degrading 2 103 4.5E-18 T 11-10-2018 IPR005624 Haem-degrading Patl_1374 45f4f3bf648e9e81808bf0b204fcf598 116 Gene3D G3DSA:3.30.450.150 1 106 6.1E-25 T 11-10-2018 IPR038084 GlcG-like domain superfamily Patl_1374 45f4f3bf648e9e81808bf0b204fcf598 116 SUPERFAMILY SSF143744 1 105 1.57E-21 T 11-10-2018 IPR038084 GlcG-like domain superfamily Patl_0040 1d24ba7679fbb86fb45e99aff6d6326d 589 Pfam PF05960 Bacterial protein of unknown function (DUF885) 47 578 5.3E-167 T 11-10-2018 IPR010281 Protein of unknown function DUF885 Patl_3817 35be7b07a2cfaa3c1d1b63a36d7cf7f4 497 SUPERFAMILY SSF51905 6 420 4.06E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3817 35be7b07a2cfaa3c1d1b63a36d7cf7f4 497 Pfam PF04820 Tryptophan halogenase 7 458 7.8E-180 T 11-10-2018 IPR006905 Flavin-dependent halogenase Patl_3817 35be7b07a2cfaa3c1d1b63a36d7cf7f4 497 Gene3D G3DSA:3.50.50.60 1 496 2.4E-181 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_3817 35be7b07a2cfaa3c1d1b63a36d7cf7f4 497 PIRSF PIRSF011396 1 497 1.8E-209 T 11-10-2018 IPR033856 Flavin-dependent tryptophan halogenase Patl_0191 ff19c0d6df13a851ec779a790540500e 811 SUPERFAMILY SSF49373 405 481 3.92E-9 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Patl_0191 ff19c0d6df13a851ec779a790540500e 811 SUPERFAMILY SSF49373 171 246 1.86E-11 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Patl_0191 ff19c0d6df13a851ec779a790540500e 811 SMART SM00634 152 247 0.03 T 11-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Patl_0191 ff19c0d6df13a851ec779a790540500e 811 SMART SM00634 55 140 0.011 T 11-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain Patl_0191 ff19c0d6df13a851ec779a790540500e 811 SUPERFAMILY SSF49373 59 139 9.81E-14 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Patl_0191 ff19c0d6df13a851ec779a790540500e 811 Gene3D G3DSA:2.60.40.10 56 142 8.5E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0191 ff19c0d6df13a851ec779a790540500e 811 Gene3D G3DSA:2.60.40.10 161 246 3.3E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0191 ff19c0d6df13a851ec779a790540500e 811 Gene3D G3DSA:2.60.40.10 389 483 3.1E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_0191 ff19c0d6df13a851ec779a790540500e 811 Gene3D G3DSA:2.60.40.10 497 589 3.7E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold Patl_3028 9baace13d30df6550ea7c00ac85d288e 247 SUPERFAMILY SSF75708 32 246 6.54E-63 T 11-10-2018 Patl_3028 9baace13d30df6550ea7c00ac85d288e 247 Gene3D G3DSA:1.10.287.500 61 195 2.6E-44 T 11-10-2018 Patl_3028 9baace13d30df6550ea7c00ac85d288e 247 Pfam PF04344 Chemotaxis phosphatase, CheZ 42 247 6.2E-77 T 11-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 Patl_3028 9baace13d30df6550ea7c00ac85d288e 247 PIRSF PIRSF002884 19 247 4.2E-79 T 11-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 Patl_3362 0209eb35520b8e095bb9de068246cff4 1247 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1200 1243 7.7E-18 T 11-10-2018 IPR020011 Motility protein FimV, C-terminal Patl_3362 0209eb35520b8e095bb9de068246cff4 1247 Gene3D G3DSA:1.20.58.2200 1181 1244 4.2E-15 T 11-10-2018 IPR038440 FimV, C-terminal domain superfamily Patl_3362 0209eb35520b8e095bb9de068246cff4 1247 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 54 125 1.4E-28 T 11-10-2018 IPR020012 Motility protein FimV, N-terminal Patl_3923 0d8f102742baaa979d79c43dfab8003d 238 Gene3D G3DSA:2.40.260.10 102 238 3.6E-31 T 11-10-2018 IPR023365 Sortase domain superfamily Patl_3923 0d8f102742baaa979d79c43dfab8003d 238 TIGRFAM TIGR03784 marine_sortase: sortase, marine proteobacterial type 39 234 1.5E-76 T 11-10-2018 IPR022445 Sortase, proteobacterial type Patl_3923 0d8f102742baaa979d79c43dfab8003d 238 Pfam PF04203 Sortase family 124 237 5.4E-23 T 11-10-2018 IPR005754 Sortase family Patl_3923 0d8f102742baaa979d79c43dfab8003d 238 SUPERFAMILY SSF63817 122 237 1.28E-25 T 11-10-2018 IPR023365 Sortase domain superfamily Patl_3923 0d8f102742baaa979d79c43dfab8003d 238 TIGRFAM TIGR01076 sortase_fam: sortase 126 237 1.2E-21 T 11-10-2018 IPR005754 Sortase family Patl_3625 fd75536a84ce13df3d49f5078229e519 354 Gene3D G3DSA:2.40.30.170 213 331 2.7E-16 T 11-10-2018 Patl_3625 fd75536a84ce13df3d49f5078229e519 354 Gene3D G3DSA:1.10.287.470 92 199 5.3E-12 T 11-10-2018 Patl_3625 fd75536a84ce13df3d49f5078229e519 354 SUPERFAMILY SSF111369 181 291 9.42E-7 T 11-10-2018 Patl_3625 fd75536a84ce13df3d49f5078229e519 354 SUPERFAMILY SSF111369 43 164 6.15E-14 T 11-10-2018 Patl_3625 fd75536a84ce13df3d49f5078229e519 354 Pfam PF13533 Biotin-lipoyl like 43 88 1.6E-14 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain Patl_3625 fd75536a84ce13df3d49f5078229e519 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 186 276 4.1E-8 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Patl_2047 cc23529be327187d5c37254868cabe20 184 SUPERFAMILY SSF55729 1 148 5.15E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_2047 cc23529be327187d5c37254868cabe20 184 PIRSF PIRSF028520 1 163 1.3E-30 T 11-10-2018 IPR016890 Uncharacterised conserved protein UCP028520 Patl_2047 cc23529be327187d5c37254868cabe20 184 Pfam PF00583 Acetyltransferase (GNAT) family 45 142 5.4E-11 T 11-10-2018 IPR000182 GNAT domain Patl_2047 cc23529be327187d5c37254868cabe20 184 Gene3D G3DSA:3.40.630.30 2 149 1.7E-17 T 11-10-2018 Patl_1199 0a389286fd2c89a0109ddefbe03b38ca 870 SUPERFAMILY SSF48208 471 723 4.42E-6 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Patl_0713 d5159f4f178c1377e3083fd2144035fe 131 Pfam PF10761 Protein of unknown function (DUF2590) 28 126 4.6E-40 T 11-10-2018 IPR019697 Bacteriophage HP1, Orf28 Patl_0642 a413e5349b8bd145dea6b40bae0686c5 117 SUPERFAMILY SSF49503 11 107 4.69E-14 T 11-10-2018 IPR008972 Cupredoxin Patl_0642 a413e5349b8bd145dea6b40bae0686c5 117 Gene3D G3DSA:2.60.40.420 17 108 2.2E-18 T 11-10-2018 IPR008972 Cupredoxin Patl_0642 a413e5349b8bd145dea6b40bae0686c5 117 Pfam PF13473 Cupredoxin-like domain 10 107 1.6E-22 T 11-10-2018 IPR028096 EfeO-type cupredoxin-like domain Patl_3101 b582274a75804806ff0ef0ab5980a2c7 278 PRINTS PR00996 Glutamate methyltransferase family signature 233 256 6.2E-39 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Patl_3101 b582274a75804806ff0ef0ab5980a2c7 278 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 6.2E-39 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Patl_3101 b582274a75804806ff0ef0ab5980a2c7 278 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 6.2E-39 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Patl_3101 b582274a75804806ff0ef0ab5980a2c7 278 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 6.2E-39 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Patl_3101 b582274a75804806ff0ef0ab5980a2c7 278 PRINTS PR00996 Glutamate methyltransferase family signature 214 228 6.2E-39 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Patl_3101 b582274a75804806ff0ef0ab5980a2c7 278 PRINTS PR00996 Glutamate methyltransferase family signature 144 160 6.2E-39 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Patl_3101 b582274a75804806ff0ef0ab5980a2c7 278 SUPERFAMILY SSF53335 76 264 6.68E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3101 b582274a75804806ff0ef0ab5980a2c7 278 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 266 4.7E-55 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Patl_3101 b582274a75804806ff0ef0ab5980a2c7 278 SMART SM00138 8 274 2.6E-82 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Patl_3101 b582274a75804806ff0ef0ab5980a2c7 278 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 56 1.1E-9 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Patl_3101 b582274a75804806ff0ef0ab5980a2c7 278 SUPERFAMILY SSF47757 5 75 3.01E-13 T 11-10-2018 Patl_3101 b582274a75804806ff0ef0ab5980a2c7 278 Gene3D G3DSA:1.10.155.10 2 74 4.1E-8 T 11-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Patl_3101 b582274a75804806ff0ef0ab5980a2c7 278 Gene3D G3DSA:3.40.50.150 75 276 5.6E-53 T 11-10-2018 Patl_2873 68c0e40c04b74790d521383ae80f9895 131 Gene3D G3DSA:1.10.760.10 51 110 2.4E-9 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_2873 68c0e40c04b74790d521383ae80f9895 131 SUPERFAMILY SSF46626 52 113 1.45E-8 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_3397 5991e8e5196ab7c4ef6662b2f315648e 174 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 21 151 1.0E-21 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Patl_3397 5991e8e5196ab7c4ef6662b2f315648e 174 SUPERFAMILY SSF52788 19 153 5.36E-40 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Patl_3397 5991e8e5196ab7c4ef6662b2f315648e 174 SMART SM00226 19 154 3.7E-34 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Patl_3397 5991e8e5196ab7c4ef6662b2f315648e 174 Gene3D G3DSA:3.40.50.2300 18 156 1.6E-41 T 11-10-2018 Patl_3166 d5488b63e2403fad886693e109c393c4 210 PIRSF PIRSF004525 2 210 6.7E-33 T 11-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted Patl_3774 a604a5006433aa8777ba704c779f195c 480 Pfam PF12040 Domain of unknown function (DUF3526) 276 442 5.4E-44 T 11-10-2018 IPR021913 Protein of unknown function DUF3526 Patl_3774 a604a5006433aa8777ba704c779f195c 480 Pfam PF12679 ABC-2 family transporter protein 8 269 7.5E-14 T 11-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Patl_2471 7691d46ec3430a8178cddfac9af95ca3 253 Pfam PF13489 Methyltransferase domain 65 210 2.1E-22 T 11-10-2018 Patl_2471 7691d46ec3430a8178cddfac9af95ca3 253 SUPERFAMILY SSF53335 27 247 1.01E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_2471 7691d46ec3430a8178cddfac9af95ca3 253 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 25 244 1.8E-86 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Patl_2471 7691d46ec3430a8178cddfac9af95ca3 253 Gene3D G3DSA:3.40.50.150 25 250 1.1E-73 T 11-10-2018 Patl_2471 7691d46ec3430a8178cddfac9af95ca3 253 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 25 250 36.63 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 Patl_1224 eb530fd17577b94a33307910c9ebf4bc 226 Pfam PF04012 PspA/IM30 family 2 222 7.5E-37 T 11-10-2018 IPR007157 PspA/IM30 Patl_2882 f21985dd0b8b463ce40e0b199bee21c0 371 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 218 227 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 Patl_2882 f21985dd0b8b463ce40e0b199bee21c0 371 Gene3D G3DSA:3.90.1150.10 12 354 8.3E-122 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Patl_2882 f21985dd0b8b463ce40e0b199bee21c0 371 Gene3D G3DSA:3.40.640.10 61 265 8.3E-122 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Patl_2882 f21985dd0b8b463ce40e0b199bee21c0 371 Pfam PF00155 Aminotransferase class I and II 54 358 3.6E-55 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Patl_2882 f21985dd0b8b463ce40e0b199bee21c0 371 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 15 359 5.8E-111 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Patl_2882 f21985dd0b8b463ce40e0b199bee21c0 371 SUPERFAMILY SSF53383 9 361 5.35E-70 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Patl_2882 f21985dd0b8b463ce40e0b199bee21c0 371 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 12 362 53.993 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Patl_0189 9b5b3a25a3a48a0aa891aba6b877c001 276 Pfam PF00795 Carbon-nitrogen hydrolase 7 254 7.3E-48 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Patl_0189 9b5b3a25a3a48a0aa891aba6b877c001 276 SUPERFAMILY SSF56317 4 268 5.1E-70 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Patl_0189 9b5b3a25a3a48a0aa891aba6b877c001 276 Gene3D G3DSA:3.60.110.10 2 276 1.9E-83 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Patl_2842 e7a243d90d875500640d24a66a7449b9 369 SUPERFAMILY SSF82689 255 354 5.62E-20 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Patl_2842 e7a243d90d875500640d24a66a7449b9 369 SUPERFAMILY SSF82861 101 183 3.53E-11 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Patl_2842 e7a243d90d875500640d24a66a7449b9 369 Gene3D G3DSA:3.30.70.100 255 348 5.0E-19 T 11-10-2018 Patl_2842 e7a243d90d875500640d24a66a7449b9 369 Gene3D G3DSA:2.30.30.60 200 249 1.7E-11 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Patl_2842 e7a243d90d875500640d24a66a7449b9 369 SUPERFAMILY SSF50182 184 250 6.54E-15 T 11-10-2018 IPR010920 LSM domain superfamily Patl_2842 e7a243d90d875500640d24a66a7449b9 369 Pfam PF00924 Mechanosensitive ion channel 142 344 3.8E-46 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Patl_0354 69afe8e3d4604322cbad6e40b4938006 282 Gene3D G3DSA:3.40.50.150 86 282 1.9E-77 T 11-10-2018 Patl_0354 69afe8e3d4604322cbad6e40b4938006 282 SUPERFAMILY SSF53335 29 281 3.08E-73 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_0354 69afe8e3d4604322cbad6e40b4938006 282 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 30 282 38.836 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 Patl_0354 69afe8e3d4604322cbad6e40b4938006 282 Pfam PF04445 Putative SAM-dependent methyltransferase 46 280 3.5E-98 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 Patl_3271 b02921e8fbcd3907036283ed6e53dcda 208 Gene3D G3DSA:3.20.19.10 8 188 4.7E-74 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Patl_3271 b02921e8fbcd3907036283ed6e53dcda 208 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 12 196 7.6E-80 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Patl_3271 b02921e8fbcd3907036283ed6e53dcda 208 Pfam PF00694 Aconitase C-terminal domain 15 132 6.4E-36 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Patl_3271 b02921e8fbcd3907036283ed6e53dcda 208 SUPERFAMILY SSF52016 10 200 6.67E-57 T 11-10-2018 Patl_3271 b02921e8fbcd3907036283ed6e53dcda 208 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 9 207 41.354 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Patl_0900 19be3822e1c8b5db74be25b6d958369c 518 PRINTS PR00171 Sugar transporter signature 439 451 3.0E-14 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_0900 19be3822e1c8b5db74be25b6d958369c 518 PRINTS PR00171 Sugar transporter signature 269 279 3.0E-14 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_0900 19be3822e1c8b5db74be25b6d958369c 518 PRINTS PR00171 Sugar transporter signature 416 437 3.0E-14 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_0900 19be3822e1c8b5db74be25b6d958369c 518 PRINTS PR00171 Sugar transporter signature 104 123 3.0E-14 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_0900 19be3822e1c8b5db74be25b6d958369c 518 PRINTS PR00171 Sugar transporter signature 21 31 3.0E-14 T 11-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 Patl_0900 19be3822e1c8b5db74be25b6d958369c 518 ProSitePatterns PS00216 Sugar transport proteins signature 1. 313 329 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Patl_0900 19be3822e1c8b5db74be25b6d958369c 518 Pfam PF00083 Sugar (and other) transporter 14 340 3.1E-71 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Patl_0900 19be3822e1c8b5db74be25b6d958369c 518 Pfam PF00083 Sugar (and other) transporter 407 514 5.3E-25 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Patl_0900 19be3822e1c8b5db74be25b6d958369c 518 SUPERFAMILY SSF103473 9 513 6.15E-67 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_3337 ea1a5879f7b925aa13009f465cd611e8 345 SUPERFAMILY SSF53474 76 281 2.49E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3337 ea1a5879f7b925aa13009f465cd611e8 345 Pfam PF12146 Serine aminopeptidase, S33 79 210 1.5E-13 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 Patl_3337 ea1a5879f7b925aa13009f465cd611e8 345 Gene3D G3DSA:3.40.50.1820 68 291 1.3E-24 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2889 f39555a5f2b6f591f75e5ccf60882efa 183 SUPERFAMILY SSF81342 4 177 1.49E-35 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Patl_2889 f39555a5f2b6f591f75e5ccf60882efa 183 Pfam PF01292 Prokaryotic cytochrome b561 8 177 1.5E-27 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Patl_1502 95766ee41928ec9297e103ae0e3ff4cb 203 SUPERFAMILY SSF49384 45 170 6.28E-9 T 11-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Patl_2578 2a93fe48e4b416cdc4ae7435f18df0cd 381 SUPERFAMILY SSF51905 2 374 2.72E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2578 2a93fe48e4b416cdc4ae7435f18df0cd 381 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 275 290 6.3E-21 T 11-10-2018 Patl_2578 2a93fe48e4b416cdc4ae7435f18df0cd 381 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 6.3E-21 T 11-10-2018 Patl_2578 2a93fe48e4b416cdc4ae7435f18df0cd 381 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 306 6.3E-21 T 11-10-2018 Patl_2578 2a93fe48e4b416cdc4ae7435f18df0cd 381 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 6.3E-21 T 11-10-2018 Patl_2578 2a93fe48e4b416cdc4ae7435f18df0cd 381 Gene3D G3DSA:3.50.50.60 251 381 9.0E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2578 2a93fe48e4b416cdc4ae7435f18df0cd 381 Gene3D G3DSA:3.50.50.60 1 250 6.8E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_2578 2a93fe48e4b416cdc4ae7435f18df0cd 381 Pfam PF01494 FAD binding domain 4 307 1.3E-30 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 Patl_2578 2a93fe48e4b416cdc4ae7435f18df0cd 381 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 379 1.2E-109 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 Patl_1832 d63d1085c2ea0deef9db829879d4c723 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 5.1E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1832 d63d1085c2ea0deef9db829879d4c723 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 5.1E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1832 d63d1085c2ea0deef9db829879d4c723 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 5.1E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1832 d63d1085c2ea0deef9db829879d4c723 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 248 1.8E-54 T 11-10-2018 Patl_1832 d63d1085c2ea0deef9db829879d4c723 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1832 d63d1085c2ea0deef9db829879d4c723 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1832 d63d1085c2ea0deef9db829879d4c723 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1832 d63d1085c2ea0deef9db829879d4c723 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1832 d63d1085c2ea0deef9db829879d4c723 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1832 d63d1085c2ea0deef9db829879d4c723 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.9E-37 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Patl_1832 d63d1085c2ea0deef9db829879d4c723 250 SUPERFAMILY SSF51735 8 249 1.73E-70 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1832 d63d1085c2ea0deef9db829879d4c723 250 Gene3D G3DSA:3.40.50.720 1 250 1.2E-69 T 11-10-2018 Patl_0259 35f62e991ba4a88910c3f96f1109dce0 305 SUPERFAMILY SSF50182 104 175 3.92E-11 T 11-10-2018 IPR010920 LSM domain superfamily Patl_0259 35f62e991ba4a88910c3f96f1109dce0 305 Gene3D G3DSA:2.30.30.60 119 175 3.0E-7 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Patl_0259 35f62e991ba4a88910c3f96f1109dce0 305 Pfam PF00924 Mechanosensitive ion channel 62 265 1.2E-17 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Patl_1689 01fc866693fb75789d8cf09efc6ed8e1 261 Gene3D G3DSA:2.70.70.10 123 260 3.7E-34 T 11-10-2018 IPR011055 Duplicated hybrid motif Patl_1689 01fc866693fb75789d8cf09efc6ed8e1 261 Pfam PF01551 Peptidase family M23 148 246 3.6E-19 T 11-10-2018 IPR016047 Peptidase M23 Patl_1689 01fc866693fb75789d8cf09efc6ed8e1 261 SUPERFAMILY SSF51261 106 246 3.71E-25 T 11-10-2018 IPR011055 Duplicated hybrid motif Patl_3901 c7a696a26f1300aa5346889fe42c373c 797 Pfam PF00593 TonB dependent receptor 293 761 9.4E-34 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_3901 c7a696a26f1300aa5346889fe42c373c 797 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 149 2.8E-14 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_3901 c7a696a26f1300aa5346889fe42c373c 797 SUPERFAMILY SSF56935 26 797 1.28E-97 T 11-10-2018 Patl_3901 c7a696a26f1300aa5346889fe42c373c 797 Gene3D G3DSA:2.40.170.20 34 780 6.6E-115 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_4049 ffbd829f272bb337e4ba7f73555eb87e 350 Pfam PF01757 Acyltransferase family 6 319 1.6E-15 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Patl_0160 ce77b00c8fbc465c42ad3a3b5263c941 383 Gene3D G3DSA:2.130.10.10 15 377 7.7E-128 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_0160 ce77b00c8fbc465c42ad3a3b5263c941 383 SUPERFAMILY SSF50969 11 372 8.89E-93 T 11-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Patl_0160 ce77b00c8fbc465c42ad3a3b5263c941 383 Pfam PF06433 Methylamine dehydrogenase heavy chain (MADH) 43 363 1.6E-42 T 11-10-2018 IPR009451 Amine dehydrogenase heavy chain GO:0030058|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 Patl_0762 486b9afb2c1bfdd8a1233c470d61caee 156 Pfam PF14358 Domain of unknown function (DUF4405) 79 139 1.8E-10 T 11-10-2018 IPR025517 Domain of unknown function DUF4405 Patl_3321 0900dda9d908b1d7d68a59da41400220 170 SUPERFAMILY SSF55021 4 66 1.04E-7 T 11-10-2018 Patl_3321 0900dda9d908b1d7d68a59da41400220 170 Gene3D G3DSA:3.30.70.260 1 75 1.1E-10 T 11-10-2018 Patl_3321 0900dda9d908b1d7d68a59da41400220 170 Gene3D G3DSA:3.30.70.260 81 167 1.5E-18 T 11-10-2018 Patl_3321 0900dda9d908b1d7d68a59da41400220 170 PIRSF PIRSF028103 1 170 5.2E-34 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 Patl_3321 0900dda9d908b1d7d68a59da41400220 170 Pfam PF13740 ACT domain 4 64 8.5E-7 T 11-10-2018 Patl_3321 0900dda9d908b1d7d68a59da41400220 170 Pfam PF13740 ACT domain 85 115 1.4E-5 T 11-10-2018 Patl_3321 0900dda9d908b1d7d68a59da41400220 170 SUPERFAMILY SSF55021 84 166 7.05E-12 T 11-10-2018 Patl_3657 946db04d776c468fc130a5049f2c46bf 307 Pfam PF00294 pfkB family carbohydrate kinase 1 297 5.3E-51 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB Patl_3657 946db04d776c468fc130a5049f2c46bf 307 Gene3D G3DSA:3.40.1190.20 1 305 7.5E-72 T 11-10-2018 IPR029056 Ribokinase-like Patl_3657 946db04d776c468fc130a5049f2c46bf 307 SUPERFAMILY SSF53613 1 300 7.02E-68 T 11-10-2018 IPR029056 Ribokinase-like Patl_1857 8cc15e226ac05aa1e27d1f77c69d63e7 146 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 12 143 4.5E-57 T 11-10-2018 IPR030991 Cytochrome c-550 PedF Patl_1857 8cc15e226ac05aa1e27d1f77c69d63e7 146 SUPERFAMILY SSF46626 60 144 3.87E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_1857 8cc15e226ac05aa1e27d1f77c69d63e7 146 Gene3D G3DSA:1.10.760.10 53 146 1.6E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_1857 8cc15e226ac05aa1e27d1f77c69d63e7 146 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 64 139 7.8E-13 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_3819 f92ddf8432a7f6002a2553cb7eb9e42a 425 SUPERFAMILY SSF103473 10 403 5.89E-52 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_3819 f92ddf8432a7f6002a2553cb7eb9e42a 425 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Patl_3819 f92ddf8432a7f6002a2553cb7eb9e42a 425 Gene3D G3DSA:1.20.1250.20 12 198 5.6E-35 T 11-10-2018 Patl_3819 f92ddf8432a7f6002a2553cb7eb9e42a 425 Gene3D G3DSA:1.20.1250.20 205 404 8.8E-27 T 11-10-2018 Patl_3819 f92ddf8432a7f6002a2553cb7eb9e42a 425 Pfam PF07690 Major Facilitator Superfamily 19 368 1.1E-40 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_1208 77dc7e87e38b4c4f2b1c2356635a8e6a 260 Gene3D G3DSA:2.40.10.10 20 127 3.8E-16 T 11-10-2018 Patl_1208 77dc7e87e38b4c4f2b1c2356635a8e6a 260 Gene3D G3DSA:2.40.10.10 128 257 6.0E-17 T 11-10-2018 Patl_1208 77dc7e87e38b4c4f2b1c2356635a8e6a 260 SUPERFAMILY SSF50494 29 249 4.64E-30 T 11-10-2018 IPR009003 Peptidase S1, PA clan Patl_1208 77dc7e87e38b4c4f2b1c2356635a8e6a 260 Pfam PF13365 Trypsin-like peptidase domain 58 219 1.1E-25 T 11-10-2018 Patl_3647 6576e7df9a97e132343c0407613d44e4 418 Pfam PF01566 Natural resistance-associated macrophage protein 32 386 4.8E-55 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Patl_0709 e9ae6d9b0293c53992e71020f0ecd969 709 Pfam PF10145 Phage-related minor tail protein 92 289 7.5E-27 T 11-10-2018 IPR010090 Phage tail tape measure protein Patl_0709 e9ae6d9b0293c53992e71020f0ecd969 709 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 54 394 1.0E-16 T 11-10-2018 IPR010090 Phage tail tape measure protein Patl_4237 fef801edb40689f93a535665769f83ba 212 Pfam PF02630 SCO1/SenC 11 184 2.9E-30 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_4237 fef801edb40689f93a535665769f83ba 212 SUPERFAMILY SSF52833 42 194 1.95E-45 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_4237 fef801edb40689f93a535665769f83ba 212 Gene3D G3DSA:3.40.30.10 35 205 4.3E-46 T 11-10-2018 Patl_2863 53ae2b4ac08a3d3e1d2ab004605f7b27 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 422 2.1E-122 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Patl_2863 53ae2b4ac08a3d3e1d2ab004605f7b27 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 416 1.9E-110 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Patl_2863 53ae2b4ac08a3d3e1d2ab004605f7b27 428 PIRSF PIRSF006066 1 428 1.1E-139 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Patl_0552 0b406a3592feca063b7a80d9bd889ec8 146 Pfam PF06295 Protein of unknown function (DUF1043) 8 134 8.1E-14 T 11-10-2018 IPR009386 Protein of unknown function DUF1043 Patl_1131 0642fef940682e465dacf5d32dd2d18d 351 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 337 79.071 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Patl_1131 0642fef940682e465dacf5d32dd2d18d 351 Pfam PF03186 CobD/Cbib protein 15 314 5.6E-84 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Patl_1254 38a146e0af6d4679f1fd8d3ba2f1c109 287 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 243 269 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 Patl_1254 38a146e0af6d4679f1fd8d3ba2f1c109 287 Pfam PF01148 Cytidylyltransferase family 3 282 1.7E-56 T 11-10-2018 Patl_3217 7fbae16e14a241ae444d310787f02e58 483 SUPERFAMILY SSF53448 216 451 3.51E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3217 7fbae16e14a241ae444d310787f02e58 483 Pfam PF00535 Glycosyl transferase family 2 222 356 6.3E-10 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Patl_3217 7fbae16e14a241ae444d310787f02e58 483 Gene3D G3DSA:3.90.550.10 203 452 1.3E-29 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_1122 f3cf2aaed3f5fd7867652fba38690d33 151 SMART SM00347 32 132 1.1E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_1122 f3cf2aaed3f5fd7867652fba38690d33 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 5.4E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_1122 f3cf2aaed3f5fd7867652fba38690d33 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 5.4E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_1122 f3cf2aaed3f5fd7867652fba38690d33 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 5.4E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_1122 f3cf2aaed3f5fd7867652fba38690d33 151 SUPERFAMILY SSF46785 9 146 2.77E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_1122 f3cf2aaed3f5fd7867652fba38690d33 151 Gene3D G3DSA:1.10.10.10 1 146 9.3E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_1122 f3cf2aaed3f5fd7867652fba38690d33 151 Pfam PF12802 MarR family 37 95 1.0E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Patl_3327 e5b0050fdd71ce348071f3c9da83a565 299 Pfam PF00274 Fructose-bisphosphate aldolase class-I 19 220 1.5E-10 T 11-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Patl_3327 e5b0050fdd71ce348071f3c9da83a565 299 SUPERFAMILY SSF51569 8 298 3.98E-95 T 11-10-2018 Patl_3327 e5b0050fdd71ce348071f3c9da83a565 299 Gene3D G3DSA:3.20.20.70 3 299 6.1E-125 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_0646 1736a64c20eed185baa2e344d018f70c 288 SUPERFAMILY SSF103481 186 286 3.66E-10 T 11-10-2018 Patl_0646 1736a64c20eed185baa2e344d018f70c 288 Pfam PF00892 EamA-like transporter family 151 281 4.4E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Patl_0858 89c5dee1ed48c9c24f000611ee8b5520 120 Gene3D G3DSA:2.102.10.10 3 116 2.6E-15 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Patl_0858 89c5dee1ed48c9c24f000611ee8b5520 120 SUPERFAMILY SSF50022 2 110 2.62E-20 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Patl_0858 89c5dee1ed48c9c24f000611ee8b5520 120 Pfam PF00355 Rieske [2Fe-2S] domain 4 92 6.6E-13 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Patl_0372 e61ee992cc59469c034ff1688ee83a22 266 SUPERFAMILY SSF53850 31 248 3.58E-20 T 11-10-2018 Patl_0372 e61ee992cc59469c034ff1688ee83a22 266 Gene3D G3DSA:3.40.190.10 115 217 6.8E-13 T 11-10-2018 Patl_0372 e61ee992cc59469c034ff1688ee83a22 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 246 8.4E-13 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_0372 e61ee992cc59469c034ff1688ee83a22 266 Gene3D G3DSA:3.40.190.10 35 246 6.8E-13 T 11-10-2018 Patl_2353 b99a9bbe4e38e6a490559d59ba72d0f0 321 Pfam PF16154 Domain of unknown function (DUF4862) 4 308 2.0E-116 T 11-10-2018 IPR032344 Protein of unknown function DUF4862 Patl_2785 7f7d92b8baf74ab1f8f3c5ee9f25c5ef 312 Gene3D G3DSA:1.20.1530.20 153 311 9.4E-8 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Patl_2785 7f7d92b8baf74ab1f8f3c5ee9f25c5ef 312 Pfam PF03547 Membrane transport protein 154 301 7.1E-12 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 Patl_2884 8be24d477ad3ab1e4c90f9172cd56bb8 209 Gene3D G3DSA:3.40.50.880 9 209 3.3E-66 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_2884 8be24d477ad3ab1e4c90f9172cd56bb8 209 SUPERFAMILY SSF52317 14 208 2.53E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_2884 8be24d477ad3ab1e4c90f9172cd56bb8 209 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 13 209 33.635 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Patl_2884 8be24d477ad3ab1e4c90f9172cd56bb8 209 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 14 208 5.5E-70 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Patl_2884 8be24d477ad3ab1e4c90f9172cd56bb8 209 PIRSF PIRSF000495 12 209 7.7E-67 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Patl_2884 8be24d477ad3ab1e4c90f9172cd56bb8 209 Pfam PF00117 Glutamine amidotransferase class-I 24 206 1.8E-20 T 11-10-2018 IPR017926 Glutamine amidotransferase Patl_0296 8e9e5e9dc47d6e6c2147f117ebfe6c46 225 Pfam PF10986 Protein of unknown function (DUF2796) 21 221 1.4E-53 T 11-10-2018 IPR021253 Protein of unknown function DUF2796 Patl_1212 69aa744033d66f7e7df24f8cde085e07 378 Pfam PF14907 Uncharacterised nucleotidyltransferase 25 278 2.6E-36 T 11-10-2018 IPR039498 Uncharacterised nucleotidyltransferase Patl_1682 6d389445c386348bd0e2480206dcc557 560 SMART SM00267 390 560 2.8E-43 T 11-10-2018 IPR000160 GGDEF domain Patl_1682 6d389445c386348bd0e2480206dcc557 560 Pfam PF00990 Diguanylate cyclase, GGDEF domain 400 556 4.1E-39 T 11-10-2018 IPR000160 GGDEF domain Patl_1682 6d389445c386348bd0e2480206dcc557 560 Gene3D G3DSA:3.30.70.270 396 560 1.5E-48 T 11-10-2018 Patl_1682 6d389445c386348bd0e2480206dcc557 560 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 397 558 2.6E-44 T 11-10-2018 IPR000160 GGDEF domain Patl_1682 6d389445c386348bd0e2480206dcc557 560 SUPERFAMILY SSF55073 406 558 7.61E-40 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_1682 6d389445c386348bd0e2480206dcc557 560 Pfam PF07695 7TM diverse intracellular signalling 181 383 8.3E-19 T 11-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 Patl_0756 afa2e5122713ad5be9bfbe92912c111e 129 Gene3D G3DSA:1.20.120.550 1 128 1.3E-18 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily Patl_0756 afa2e5122713ad5be9bfbe92912c111e 129 Pfam PF01124 MAPEG family 4 128 1.3E-21 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein Patl_0756 afa2e5122713ad5be9bfbe92912c111e 129 SUPERFAMILY SSF161084 4 126 4.97E-23 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily Patl_3141 8c0bfe8582465bfcfb50661ceeb1ca51 346 Pfam PF14238 Domain of unknown function (DUF4340) 84 249 2.2E-12 T 11-10-2018 IPR025641 Domain of unknown function DUF4340 Patl_2480 a35ab7042e49b8f127e4af5d2f9ef529 154 SUPERFAMILY SSF52833 4 153 6.24E-46 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_2480 a35ab7042e49b8f127e4af5d2f9ef529 154 PIRSF PIRSF000239 1 141 3.0E-17 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_2480 a35ab7042e49b8f127e4af5d2f9ef529 154 Pfam PF00578 AhpC/TSA family 7 134 1.6E-35 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_2480 a35ab7042e49b8f127e4af5d2f9ef529 154 Gene3D G3DSA:3.40.30.10 2 154 7.4E-46 T 11-10-2018 Patl_2059 c82565a74d560f678d1bf5163428c226 211 PIRSF PIRSF006324 4 211 6.2E-45 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Patl_2059 c82565a74d560f678d1bf5163428c226 211 Pfam PF01810 LysE type translocator 20 210 5.1E-31 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Patl_3621 3aecfc07310c60ab9c2b074c4bfc67c3 165 Gene3D G3DSA:3.40.220.10 1 164 4.4E-8 T 11-10-2018 Patl_3621 3aecfc07310c60ab9c2b074c4bfc67c3 165 SUPERFAMILY SSF52949 4 162 1.41E-11 T 11-10-2018 Patl_4264 7636fda57c9be7ec695d4e497bcc1dda 162 Gene3D G3DSA:2.60.40.1880 22 162 5.5E-20 T 11-10-2018 IPR038696 Invasion protein B superfamily Patl_4264 7636fda57c9be7ec695d4e497bcc1dda 162 Pfam PF06776 Invasion associated locus B (IalB) protein 26 155 2.1E-27 T 11-10-2018 IPR010642 Invasion protein B Patl_3677 f1306e4bf71a3731e32e47b450c3b702 315 Gene3D G3DSA:3.40.50.2300 193 315 1.6E-31 T 11-10-2018 Patl_3677 f1306e4bf71a3731e32e47b450c3b702 315 SMART SM00448 195 307 5.6E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3677 f1306e4bf71a3731e32e47b450c3b702 315 Pfam PF00072 Response regulator receiver domain 197 306 1.1E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Patl_3677 f1306e4bf71a3731e32e47b450c3b702 315 Pfam PF13690 Chemotaxis phosphatase CheX 48 150 2.0E-15 T 11-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain Patl_3677 f1306e4bf71a3731e32e47b450c3b702 315 SUPERFAMILY SSF52172 194 312 3.98E-31 T 11-10-2018 IPR011006 CheY-like superfamily Patl_3677 f1306e4bf71a3731e32e47b450c3b702 315 Gene3D G3DSA:3.40.1550.10 9 165 1.2E-17 T 11-10-2018 IPR028976 CheC-like superfamily Patl_3677 f1306e4bf71a3731e32e47b450c3b702 315 SUPERFAMILY SSF103039 10 149 2.22E-11 T 11-10-2018 IPR028976 CheC-like superfamily Patl_4198 22800c981890ce280cf07652770502ca 295 Gene3D G3DSA:1.10.10.10 3 94 1.6E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_4198 22800c981890ce280cf07652770502ca 295 Pfam PF03466 LysR substrate binding domain 90 285 9.7E-17 T 11-10-2018 IPR005119 LysR, substrate-binding Patl_4198 22800c981890ce280cf07652770502ca 295 Gene3D G3DSA:3.40.190.290 95 290 1.0E-12 T 11-10-2018 Patl_4198 22800c981890ce280cf07652770502ca 295 SUPERFAMILY SSF53850 90 284 4.52E-21 T 11-10-2018 Patl_4198 22800c981890ce280cf07652770502ca 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.2E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Patl_4198 22800c981890ce280cf07652770502ca 295 SUPERFAMILY SSF46785 5 90 7.62E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_0213 cf9c09c14fb3e4d4ef610df455f250e9 233 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 12 187 8.4E-26 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT Patl_3365 1132e6b74882e297b56c9b2e135e4e3d 297 SUPERFAMILY SSF53474 15 293 3.31E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3365 1132e6b74882e297b56c9b2e135e4e3d 297 Gene3D G3DSA:3.40.50.1820 4 295 1.2E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3365 1132e6b74882e297b56c9b2e135e4e3d 297 Pfam PF00561 alpha/beta hydrolase fold 40 126 1.0E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_0805 1d60d2431575322b66d78b0cae5ec715 295 SUPERFAMILY SSF49899 53 293 5.85E-50 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Patl_0805 1d60d2431575322b66d78b0cae5ec715 295 Pfam PF00722 Glycosyl hydrolases family 16 102 258 1.3E-17 T 11-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 Patl_0805 1d60d2431575322b66d78b0cae5ec715 295 Gene3D G3DSA:2.60.120.200 45 294 3.6E-51 T 11-10-2018 Patl_0843 305861aad3558f3936643f82ad15363f 284 Gene3D G3DSA:2.60.120.200 36 284 6.3E-44 T 11-10-2018 Patl_0843 305861aad3558f3936643f82ad15363f 284 SUPERFAMILY SSF49899 47 283 1.9E-45 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Patl_0843 305861aad3558f3936643f82ad15363f 284 Pfam PF00722 Glycosyl hydrolases family 16 82 280 1.0E-18 T 11-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 Patl_3349 c29a101a0e5b6e5e14e6e9c5bb333c8e 251 SMART SM00345 13 72 8.9E-24 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_3349 c29a101a0e5b6e5e14e6e9c5bb333c8e 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 2.9E-23 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_3349 c29a101a0e5b6e5e14e6e9c5bb333c8e 251 SMART SM00895 97 225 1.2E-17 T 11-10-2018 IPR011711 GntR, C-terminal Patl_3349 c29a101a0e5b6e5e14e6e9c5bb333c8e 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 5.5E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_3349 c29a101a0e5b6e5e14e6e9c5bb333c8e 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 5.5E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Patl_3349 c29a101a0e5b6e5e14e6e9c5bb333c8e 251 Gene3D G3DSA:1.10.10.10 1 72 8.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_3349 c29a101a0e5b6e5e14e6e9c5bb333c8e 251 SUPERFAMILY SSF48008 93 232 3.92E-20 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_3349 c29a101a0e5b6e5e14e6e9c5bb333c8e 251 SUPERFAMILY SSF46785 3 80 1.06E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Patl_3349 c29a101a0e5b6e5e14e6e9c5bb333c8e 251 Pfam PF07729 FCD domain 97 223 1.2E-19 T 11-10-2018 IPR011711 GntR, C-terminal Patl_3349 c29a101a0e5b6e5e14e6e9c5bb333c8e 251 Gene3D G3DSA:1.20.120.530 95 234 1.3E-24 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Patl_1743 35ff4ad8fd49f4c7134031c30f10fe50 270 Pfam PF03618 Kinase/pyrophosphorylase 5 260 7.5E-76 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 Patl_1743 35ff4ad8fd49f4c7134031c30f10fe50 270 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 1 269 75.718 T 11-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein Patl_1058 a66503cd039117a1055691649c106261 683 Pfam PF03239 Iron permease FTR1 family 390 543 2.0E-20 T 11-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 Patl_1058 a66503cd039117a1055691649c106261 683 SUPERFAMILY SSF46626 182 267 2.58E-11 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_1058 a66503cd039117a1055691649c106261 683 Gene3D G3DSA:1.10.760.10 166 269 3.0E-11 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_1058 a66503cd039117a1055691649c106261 683 Pfam PF00034 Cytochrome c 186 262 4.8E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_1153 6fc0afb786f501dd0842a10962d3c056 198 Gene3D G3DSA:3.40.1740.10 13 198 1.2E-66 T 11-10-2018 Patl_1153 6fc0afb786f501dd0842a10962d3c056 198 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 15 198 37.079 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 Patl_1153 6fc0afb786f501dd0842a10962d3c056 198 SUPERFAMILY SSF143456 16 198 2.22E-64 T 11-10-2018 Patl_1153 6fc0afb786f501dd0842a10962d3c056 198 Pfam PF02622 Uncharacterized ACR, COG1678 26 185 4.8E-51 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 Patl_3254 01a5d986c355e70ed9561a531b495227 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 2.7E-59 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3254 01a5d986c355e70ed9561a531b495227 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 2.7E-59 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3254 01a5d986c355e70ed9561a531b495227 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 2.7E-59 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3254 01a5d986c355e70ed9561a531b495227 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 2.7E-59 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3254 01a5d986c355e70ed9561a531b495227 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 2.7E-59 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3254 01a5d986c355e70ed9561a531b495227 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 2.7E-59 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3254 01a5d986c355e70ed9561a531b495227 248 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 4.6E-77 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Patl_3254 01a5d986c355e70ed9561a531b495227 248 Pfam PF01578 Cytochrome C assembly protein 26 184 1.2E-31 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Patl_1207 18f5882b9960ef8a2f4f084b23a3449b 56 Gene3D G3DSA:3.40.50.720 1 56 4.9E-13 T 11-10-2018 Patl_1207 18f5882b9960ef8a2f4f084b23a3449b 56 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 53 3.8E-8 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Patl_1207 18f5882b9960ef8a2f4f084b23a3449b 56 SUPERFAMILY SSF51735 1 42 1.95E-13 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1282 b157720b74b2a5aacf9723881578ca64 186 Pfam PF13689 Domain of unknown function (DUF4154) 48 183 8.5E-29 T 11-10-2018 IPR025293 YfiR-like Patl_3616 df4cf6774763584a58dd57d638183c50 147 Pfam PF05360 yiaA/B two helix domain 10 62 2.1E-19 T 11-10-2018 IPR008024 YiaAB two helix Patl_3616 df4cf6774763584a58dd57d638183c50 147 Pfam PF05360 yiaA/B two helix domain 75 125 2.9E-20 T 11-10-2018 IPR008024 YiaAB two helix Patl_3481 bfe6d9dd747980e1e86003b0292113e4 181 Pfam PF00929 Exonuclease 9 170 8.4E-37 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Patl_3481 bfe6d9dd747980e1e86003b0292113e4 181 SUPERFAMILY SSF53098 3 179 2.35E-46 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_3481 bfe6d9dd747980e1e86003b0292113e4 181 SMART SM00479 7 180 8.5E-24 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Patl_3481 bfe6d9dd747980e1e86003b0292113e4 181 Gene3D G3DSA:3.30.420.10 2 181 1.1E-71 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Patl_3481 bfe6d9dd747980e1e86003b0292113e4 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 41.79 T 11-10-2018 IPR022894 Oligoribonuclease GO:0000175 Patl_2654 4792dff2bde1204bec0a6c66e2e8d256 280 Pfam PF14337 Domain of unknown function (DUF4393) 82 271 2.9E-54 T 11-10-2018 IPR025506 Protein of unknown function DUF4393 Patl_2654 4792dff2bde1204bec0a6c66e2e8d256 280 Gene3D G3DSA:1.10.10.2280 129 279 7.7E-14 T 11-10-2018 Patl_3318 5dc802265c3ecb4786bff2a8d08282d3 361 SUPERFAMILY SSF53850 26 353 1.54E-62 T 11-10-2018 Patl_3318 5dc802265c3ecb4786bff2a8d08282d3 361 Pfam PF12849 PBP superfamily domain 19 324 1.9E-37 T 11-10-2018 IPR024370 PBP domain Patl_3299 8b5d99e6bedacbcc2ac027b317f94116 433 SUPERFAMILY SSF103473 9 423 3.92E-36 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_3299 8b5d99e6bedacbcc2ac027b317f94116 433 Gene3D G3DSA:1.20.1250.20 3 425 1.3E-38 T 11-10-2018 Patl_3299 8b5d99e6bedacbcc2ac027b317f94116 433 Pfam PF07690 Major Facilitator Superfamily 34 373 5.2E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_0344 9bd83482298b8d25553192ab489a4eb4 159 Pfam PF04945 YHS domain 52 95 5.3E-7 T 11-10-2018 IPR007029 YHS domain Patl_0902 90aac3dab1c90e752b88c8063244b962 159 Pfam PF11008 Protein of unknown function (DUF2846) 13 120 5.7E-23 T 11-10-2018 IPR022548 Domain of unknown function DUF2846 Patl_4023 ca829691fc218f6de4a0e073f5e0a461 277 Pfam PF13509 S1 domain 4 64 1.1E-23 T 11-10-2018 IPR039566 Conserved virulence factor B, S1 domain Patl_4023 ca829691fc218f6de4a0e073f5e0a461 277 Pfam PF13509 S1 domain 76 126 1.5E-6 T 11-10-2018 IPR039566 Conserved virulence factor B, S1 domain Patl_4023 ca829691fc218f6de4a0e073f5e0a461 277 Gene3D G3DSA:1.10.10.10 214 276 5.4E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Patl_4023 ca829691fc218f6de4a0e073f5e0a461 277 PIRSF PIRSF012524 1 277 4.9E-75 T 11-10-2018 IPR014464 Conserved virulence factor B Patl_0011 b04eceba1ddae7936858e3b1f1c0c556 149 Pfam PF10675 Protein of unknown function (DUF2489) 16 144 3.8E-41 T 11-10-2018 IPR019617 Domain of unknown function DUF2489 Patl_3095 5d0dbc2fede213a4a7db70bb54b0ea85 262 Pfam PF00460 Flagella basal body rod protein 5 35 3.7E-11 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Patl_3095 5d0dbc2fede213a4a7db70bb54b0ea85 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 1.5E-42 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Patl_3095 5d0dbc2fede213a4a7db70bb54b0ea85 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 244 1.2E-29 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Patl_3095 5d0dbc2fede213a4a7db70bb54b0ea85 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Patl_3095 5d0dbc2fede213a4a7db70bb54b0ea85 262 SUPERFAMILY SSF117143 93 223 5.36E-36 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Patl_3095 5d0dbc2fede213a4a7db70bb54b0ea85 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 5.2E-108 T 11-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 Patl_3095 5d0dbc2fede213a4a7db70bb54b0ea85 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 1.4E-24 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Patl_1192 9fa12c91b06c24a33e7946f56da3d971 349 SUPERFAMILY SSF52540 61 335 5.31E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1192 9fa12c91b06c24a33e7946f56da3d971 349 Gene3D G3DSA:3.40.50.300 29 335 5.0E-21 T 11-10-2018 Patl_1192 9fa12c91b06c24a33e7946f56da3d971 349 Pfam PF13469 Sulfotransferase family 65 295 2.1E-13 T 11-10-2018 Patl_2453 5bdc02d000529c0a73d2188e97a22557 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 4 118 7.4E-37 T 11-10-2018 IPR017462 Sulphur relay, TusC/DsrF Patl_2453 5bdc02d000529c0a73d2188e97a22557 118 Gene3D G3DSA:3.40.1260.10 1 118 2.5E-39 T 11-10-2018 IPR027396 DsrEFH-like Patl_2453 5bdc02d000529c0a73d2188e97a22557 118 SUPERFAMILY SSF75169 1 118 9.03E-35 T 11-10-2018 IPR027396 DsrEFH-like Patl_2453 5bdc02d000529c0a73d2188e97a22557 118 Pfam PF02635 DsrE/DsrF-like family 2 118 6.3E-25 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Patl_3304 ff6e3f7f039a8a73e68cf4bd8537f5fa 210 Pfam PF13460 NAD(P)H-binding 7 198 3.5E-26 T 11-10-2018 IPR016040 NAD(P)-binding domain Patl_3304 ff6e3f7f039a8a73e68cf4bd8537f5fa 210 SUPERFAMILY SSF51735 1 208 5.48E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_3304 ff6e3f7f039a8a73e68cf4bd8537f5fa 210 Gene3D G3DSA:3.40.50.720 1 209 1.1E-47 T 11-10-2018 Patl_1394 a764244b3d44ffa715e6718687563cc5 640 SMART SM00763 19 376 1.8E-207 T 11-10-2018 IPR013153 PrkA AAA domain Patl_1394 a764244b3d44ffa715e6718687563cc5 640 PIRSF PIRSF000549 1 640 7.8E-285 T 11-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 Patl_1394 a764244b3d44ffa715e6718687563cc5 640 SUPERFAMILY SSF52540 75 364 1.58E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1394 a764244b3d44ffa715e6718687563cc5 640 Pfam PF08298 PrkA AAA domain 20 376 7.1E-173 T 11-10-2018 IPR013153 PrkA AAA domain Patl_1394 a764244b3d44ffa715e6718687563cc5 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 4.0E-72 T 11-10-2018 IPR010650 PrkA C-terminal domain Patl_4106 a0ed7ee3bfa250cb8518acdc0e94794a 396 SUPERFAMILY SSF56935 21 396 1.28E-26 T 11-10-2018 Patl_3040 9b6ad22bd659fafcdbdf8f74407d1d5c 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 8.4E-21 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Patl_3040 9b6ad22bd659fafcdbdf8f74407d1d5c 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 8.4E-21 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Patl_3040 9b6ad22bd659fafcdbdf8f74407d1d5c 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 8.4E-21 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Patl_3040 9b6ad22bd659fafcdbdf8f74407d1d5c 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 8.4E-21 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Patl_3040 9b6ad22bd659fafcdbdf8f74407d1d5c 352 SUPERFAMILY SSF101801 247 322 3.79E-15 T 11-10-2018 IPR036429 SpoA-like superfamily Patl_3040 9b6ad22bd659fafcdbdf8f74407d1d5c 352 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 319 2.1E-115 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Patl_3040 9b6ad22bd659fafcdbdf8f74407d1d5c 352 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 2.0E-17 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) Patl_3040 9b6ad22bd659fafcdbdf8f74407d1d5c 352 SUPERFAMILY SSF103039 4 230 2.62E-18 T 11-10-2018 IPR028976 CheC-like superfamily Patl_3040 9b6ad22bd659fafcdbdf8f74407d1d5c 352 Pfam PF02154 Flagellar motor switch protein FliM 37 229 1.7E-80 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Patl_3040 9b6ad22bd659fafcdbdf8f74407d1d5c 352 Gene3D G3DSA:3.40.1550.10 43 230 8.0E-55 T 11-10-2018 IPR028976 CheC-like superfamily Patl_3040 9b6ad22bd659fafcdbdf8f74407d1d5c 352 PIRSF PIRSF002888 1 328 1.4E-93 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Patl_0515 57f449270f093edcc2879975df0334d8 138 Pfam PF11026 Protein of unknown function (DUF2721) 6 118 2.9E-33 T 11-10-2018 IPR021279 Protein of unknown function DUF2721 Patl_2705 3e4ebec6d245369a31a65222bec2cdbd 305 Gene3D G3DSA:3.40.50.1820 3 304 7.5E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2705 3e4ebec6d245369a31a65222bec2cdbd 305 Pfam PF12697 Alpha/beta hydrolase family 35 297 1.3E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_2705 3e4ebec6d245369a31a65222bec2cdbd 305 SUPERFAMILY SSF53474 17 300 1.71E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0026 56009899a2cff4e6c3d00c4f0085f34a 158 Hamap MF_00598 Protein Smg [smg]. 1 158 32.293 T 11-10-2018 IPR007456 Smg Patl_0026 56009899a2cff4e6c3d00c4f0085f34a 158 Pfam PF04361 Protein of unknown function (DUF494) 1 158 7.3E-61 T 11-10-2018 IPR007456 Smg Patl_2477 e5b80900601ca9e1458a6d4cbb8740cc 368 Gene3D G3DSA:3.30.310.170 242 366 1.0E-31 T 11-10-2018 Patl_2477 e5b80900601ca9e1458a6d4cbb8740cc 368 Pfam PF06804 NlpB/DapX lipoprotein 33 361 1.3E-98 T 11-10-2018 IPR010653 NlpB/DapX lipoprotein Patl_2477 e5b80900601ca9e1458a6d4cbb8740cc 368 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 2 362 39.019 T 11-10-2018 IPR014524 Outer membrane protein assembly factor BamC Patl_1631 22fec72bdfd48b5c34c164ad349faa29 431 Pfam PF03283 Pectinacetylesterase 65 250 1.8E-16 T 11-10-2018 IPR004963 Pectinacetylesterase/NOTUM GO:0016787 Reactome: R-HSA-381426|Reactome: R-HSA-5362798|Reactome: R-HSA-8957275 Patl_0280 8e8ffc7c385289226f6cb0c06f47be37 140 Gene3D G3DSA:1.25.40.10 56 138 1.4E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_4165 4e47a61b4ed2007a2f729c11f62243cb 947 SUPERFAMILY SSF56935 23 945 1.36E-85 T 11-10-2018 Patl_4165 4e47a61b4ed2007a2f729c11f62243cb 947 Gene3D G3DSA:2.170.130.10 18 168 2.9E-34 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_4165 4e47a61b4ed2007a2f729c11f62243cb 947 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 164 3.3E-20 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_4165 4e47a61b4ed2007a2f729c11f62243cb 947 Pfam PF00593 TonB dependent receptor 412 945 3.1E-37 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_2186 5e75d38baac35a92473d774e19ccef75 576 SMART SM00642 63 464 3.2E-28 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_2186 5e75d38baac35a92473d774e19ccef75 576 SUPERFAMILY SSF51445 59 471 1.1E-67 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_2186 5e75d38baac35a92473d774e19ccef75 576 Pfam PF00128 Alpha amylase, catalytic domain 107 430 1.3E-46 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Patl_2186 5e75d38baac35a92473d774e19ccef75 576 Gene3D G3DSA:3.20.20.80 52 466 2.5E-85 T 11-10-2018 Patl_0197 843acf42e0e04dce11a36aecc33fc061 151 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 141 1.1E-14 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain Patl_2410 03963d0dbcc72d140e01d8fb1a1fa28a 123 ProSitePatterns PS00195 Glutaredoxin active site. 47 63 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 Patl_2410 03963d0dbcc72d140e01d8fb1a1fa28a 123 SUPERFAMILY SSF52833 45 122 6.84E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_2410 03963d0dbcc72d140e01d8fb1a1fa28a 123 Gene3D G3DSA:3.40.30.10 22 122 4.3E-14 T 11-10-2018 Patl_2410 03963d0dbcc72d140e01d8fb1a1fa28a 123 Pfam PF13417 Glutathione S-transferase, N-terminal domain 47 122 1.1E-12 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 Patl_0799 d8e8e39afd2e820af68826466281f564 312 Gene3D G3DSA:3.20.20.100 1 295 1.9E-66 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Patl_0799 d8e8e39afd2e820af68826466281f564 312 Pfam PF00248 Aldo/keto reductase family 16 294 5.2E-52 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain Patl_0799 d8e8e39afd2e820af68826466281f564 312 SUPERFAMILY SSF51430 1 299 2.1E-62 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Patl_1735 ad33a16c486f65b433d6629333446202 327 SUPERFAMILY SSF143422 16 193 1.12E-17 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Patl_3106 5ebc64ae2ef5aab1c0d0c48dc2fd7555 155 Pfam PF02169 LPP20 lipoprotein 41 132 4.5E-12 T 11-10-2018 IPR024952 Lipoprotein LPP20-like Patl_3106 5ebc64ae2ef5aab1c0d0c48dc2fd7555 155 PIRSF PIRSF028687 3 155 2.6E-45 T 11-10-2018 IPR007293 Flagellar protein FlgP Patl_2173 a522b09125fbef983dd2bdb2c30113b0 552 Pfam PF03961 Flagellar Assembly Protein A 83 545 6.7E-116 T 11-10-2018 IPR005646 Flagellar assembly protein A Patl_2735 8a60af0251942729676f0cb5b121351a 175 Pfam PF12570 Protein of unknown function (DUF3750) 41 173 4.3E-49 T 11-10-2018 IPR022224 Protein of unknown function DUF3750 Patl_0751 a382ee69a80af284c9ecf459e3a90744 212 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 14 196 4.3E-31 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 Patl_0751 a382ee69a80af284c9ecf459e3a90744 212 Pfam PF04973 Nicotinamide mononucleotide transporter 14 193 1.4E-52 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 Patl_0688 c2c80fc4d330b037c90477fca6addbb4 893 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 226 547 3.3E-86 T 11-10-2018 IPR008766 Replication gene A protein GO:0006260 Patl_1657 1a2c1638369897579e157e1a14bb38b8 584 Pfam PF13584 Oxygen tolerance 19 498 9.0E-115 T 11-10-2018 IPR025738 Aerotolerance-related protein BatD Patl_1736 61d9bf90847e0d2fe4f85700ebbb45ad 429 SUPERFAMILY SSF56672 63 332 6.32E-16 T 11-10-2018 Patl_1736 61d9bf90847e0d2fe4f85700ebbb45ad 429 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 210 330 9.9E-14 T 11-10-2018 IPR000477 Reverse transcriptase domain Patl_2029 6b3b33a9bfd0348c5d037b99da0c7bdd 422 SUPERFAMILY SSF56954 12 407 1.7E-58 T 11-10-2018 Patl_2029 6b3b33a9bfd0348c5d037b99da0c7bdd 422 Gene3D G3DSA:1.20.1600.10 9 416 8.4E-48 T 11-10-2018 Patl_2029 6b3b33a9bfd0348c5d037b99da0c7bdd 422 Pfam PF02321 Outer membrane efflux protein 237 396 8.5E-12 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Patl_2029 6b3b33a9bfd0348c5d037b99da0c7bdd 422 Pfam PF02321 Outer membrane efflux protein 26 199 6.2E-14 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Patl_1279 bc152d0fa3aa4fbbfb87a513f398e701 840 SUPERFAMILY SSF141371 152 256 1.02E-5 T 11-10-2018 Patl_1279 bc152d0fa3aa4fbbfb87a513f398e701 840 Gene3D G3DSA:2.40.10.220 151 243 3.3E-5 T 11-10-2018 Patl_1279 bc152d0fa3aa4fbbfb87a513f398e701 840 Gene3D G3DSA:2.40.10.220 494 608 3.3E-6 T 11-10-2018 Patl_1279 bc152d0fa3aa4fbbfb87a513f398e701 840 Pfam PF07238 PilZ domain 498 581 6.3E-7 T 11-10-2018 IPR009875 PilZ domain GO:0035438 Patl_1279 bc152d0fa3aa4fbbfb87a513f398e701 840 Pfam PF07238 PilZ domain 153 214 4.7E-6 T 11-10-2018 IPR009875 PilZ domain GO:0035438 Patl_1279 bc152d0fa3aa4fbbfb87a513f398e701 840 SUPERFAMILY SSF141371 494 555 7.65E-7 T 11-10-2018 Patl_2761 1703741412240ed13001f44facb05870 188 SUPERFAMILY SSF69118 1 174 1.13E-42 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Patl_2761 1703741412240ed13001f44facb05870 188 Gene3D G3DSA:1.20.1290.10 13 179 3.3E-38 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Patl_2761 1703741412240ed13001f44facb05870 188 Pfam PF02627 Carboxymuconolactone decarboxylase family 41 123 2.4E-11 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Patl_0145 69e62bad8976c2e54c1a9a7903870224 135 Gene3D G3DSA:3.10.129.10 1 132 8.1E-33 T 11-10-2018 Patl_0145 69e62bad8976c2e54c1a9a7903870224 135 SUPERFAMILY SSF54637 1 128 5.34E-33 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_0145 69e62bad8976c2e54c1a9a7903870224 135 Pfam PF13279 Thioesterase-like superfamily 8 123 1.2E-10 T 11-10-2018 Patl_3646 661cf3f49f5e9a2063ced72641ea7d2a 373 Gene3D G3DSA:2.60.120.10 281 359 1.3E-5 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_3646 661cf3f49f5e9a2063ced72641ea7d2a 373 Gene3D G3DSA:2.60.120.10 14 261 9.0E-37 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_3646 661cf3f49f5e9a2063ced72641ea7d2a 373 SUPERFAMILY SSF51182 15 363 1.41E-51 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_2696 259fd8a651f085a22dd7145193ac368b 156 SUPERFAMILY SSF55729 1 150 2.57E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_2696 259fd8a651f085a22dd7145193ac368b 156 Pfam PF00583 Acetyltransferase (GNAT) family 27 129 2.5E-14 T 11-10-2018 IPR000182 GNAT domain Patl_2696 259fd8a651f085a22dd7145193ac368b 156 Gene3D G3DSA:3.40.630.30 1 153 3.8E-39 T 11-10-2018 Patl_2636 f9f31dfecf7aecd279e97d5107bb0114 137 Pfam PF13673 Acetyltransferase (GNAT) domain 38 133 1.9E-10 T 11-10-2018 IPR000182 GNAT domain Patl_2636 f9f31dfecf7aecd279e97d5107bb0114 137 Gene3D G3DSA:3.40.630.30 4 133 4.9E-31 T 11-10-2018 Patl_2636 f9f31dfecf7aecd279e97d5107bb0114 137 SUPERFAMILY SSF55729 14 123 3.49E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_0802 5cf05f3ea2e28b6f3f98401623261707 500 Pfam PF04820 Tryptophan halogenase 7 453 2.2E-39 T 11-10-2018 IPR006905 Flavin-dependent halogenase Patl_0802 5cf05f3ea2e28b6f3f98401623261707 500 Gene3D G3DSA:3.50.50.60 5 489 3.4E-69 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_0802 5cf05f3ea2e28b6f3f98401623261707 500 SUPERFAMILY SSF51905 7 399 4.86E-7 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_4007 972e545d2231f2a042683b551664a965 390 Pfam PF00534 Glycosyl transferases group 1 203 358 6.6E-37 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Patl_4007 972e545d2231f2a042683b551664a965 390 SUPERFAMILY SSF53756 146 381 1.65E-49 T 11-10-2018 Patl_4007 972e545d2231f2a042683b551664a965 390 Gene3D G3DSA:3.40.50.2000 196 366 1.0E-40 T 11-10-2018 Patl_2396 26aa666d68a4278212b1983d821da132 355 Pfam PF00999 Sodium/hydrogen exchanger family 13 352 5.6E-54 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 Patl_2396 26aa666d68a4278212b1983d821da132 355 Gene3D G3DSA:1.20.1530.20 7 354 1.1E-71 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily Patl_3279 1488987f1ee45a547c11364e63fcbb20 304 SUPERFAMILY SSF53850 73 294 3.55E-25 T 11-10-2018 Patl_3279 1488987f1ee45a547c11364e63fcbb20 304 Gene3D G3DSA:3.40.190.10 88 294 1.4E-14 T 11-10-2018 Patl_3279 1488987f1ee45a547c11364e63fcbb20 304 Gene3D G3DSA:3.40.190.10 158 254 1.4E-14 T 11-10-2018 Patl_3279 1488987f1ee45a547c11364e63fcbb20 304 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 106 295 2.3E-12 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_2748 6f66f9da1e3583caa83eb788e34ee4e2 280 Gene3D G3DSA:3.40.50.450 148 277 3.2E-8 T 11-10-2018 Patl_1071 b7367466d88426138eff78daceda2082 380 SUPERFAMILY SSF56935 58 361 9.61E-5 T 11-10-2018 Patl_1071 b7367466d88426138eff78daceda2082 380 Pfam PF10082 Putative beta-barrel porin 2 9 378 3.5E-44 T 11-10-2018 IPR018759 Putative beta-barrel porin 2 Patl_3953 e812ad108f870482cf4523923f5bc6b6 212 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 3.7E-91 T 11-10-2018 IPR021342 Protein of unknown function DUF2959 Patl_1378 c2a02440f34340ae85f75b6d631ecde8 133 Pfam PF04940 Sensors of blue-light using FAD 1 92 1.1E-28 T 11-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 Patl_1378 c2a02440f34340ae85f75b6d631ecde8 133 Gene3D G3DSA:3.30.70.3200 1 132 1.7E-33 T 11-10-2018 Patl_1378 c2a02440f34340ae85f75b6d631ecde8 133 SMART SM01034 1 93 1.0E-39 T 11-10-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 Patl_1378 c2a02440f34340ae85f75b6d631ecde8 133 SUPERFAMILY SSF54975 1 108 1.26E-33 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Patl_0150 7b53e17b630c735b47fcd3b66e180ad8 49 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 2 39 1.9E-22 T 11-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 Patl_0150 7b53e17b630c735b47fcd3b66e180ad8 49 PIRSF PIRSF037205 1 49 3.4E-24 T 11-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 Patl_2457 98677749f52d61d6886caaa5e346e663 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 10 121 3.2E-23 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Patl_2457 98677749f52d61d6886caaa5e346e663 127 TIGRFAM TIGR00494 crcB: protein CrcB 10 124 6.8E-29 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Patl_2457 98677749f52d61d6886caaa5e346e663 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 8 126 19.1 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Patl_3639 36400a1cd521300fce3cafcbe76ac647 375 SUPERFAMILY SSF49899 47 362 1.27E-38 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Patl_3639 36400a1cd521300fce3cafcbe76ac647 375 Pfam PF08787 Alginate lyase 47 362 2.7E-72 T 11-10-2018 IPR014895 Alginate lyase 2 Patl_3639 36400a1cd521300fce3cafcbe76ac647 375 Gene3D G3DSA:2.60.120.1610 58 370 1.0E-91 T 11-10-2018 Patl_0578 4edcc5808d1c39e2521fb8fad535d14e 373 Pfam PF04389 Peptidase family M28 101 349 1.8E-31 T 11-10-2018 IPR007484 Peptidase M28 Patl_0578 4edcc5808d1c39e2521fb8fad535d14e 373 SUPERFAMILY SSF53187 40 351 6.02E-48 T 11-10-2018 Patl_0214 9857322d207c9b29d14bbdbc49c78914 139 Gene3D G3DSA:3.10.180.10 3 136 4.6E-35 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_0214 9857322d207c9b29d14bbdbc49c78914 139 SUPERFAMILY SSF54593 5 132 9.44E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_1112 63b4fc32003f928a602e369c3e35154f 435 SUPERFAMILY SSF52833 248 433 1.58E-27 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_1112 63b4fc32003f928a602e369c3e35154f 435 Gene3D G3DSA:3.40.30.10 39 179 3.5E-5 T 11-10-2018 Patl_1112 63b4fc32003f928a602e369c3e35154f 435 Gene3D G3DSA:3.40.30.10 248 435 6.1E-35 T 11-10-2018 Patl_1112 63b4fc32003f928a602e369c3e35154f 435 Pfam PF01323 DSBA-like thioredoxin domain 248 432 1.6E-21 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Patl_4120 91f275301ca9af851883ac8d5bf4aaa7 237 Gene3D G3DSA:1.10.150.240 28 94 3.3E-55 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Patl_4120 91f275301ca9af851883ac8d5bf4aaa7 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 84 191 5.8E-17 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Patl_4120 91f275301ca9af851883ac8d5bf4aaa7 237 Gene3D G3DSA:3.40.50.1000 16 203 3.3E-55 T 11-10-2018 IPR023214 HAD superfamily Patl_4120 91f275301ca9af851883ac8d5bf4aaa7 237 SUPERFAMILY SSF56784 13 222 2.21E-46 T 11-10-2018 IPR036412 HAD-like superfamily Patl_4120 91f275301ca9af851883ac8d5bf4aaa7 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 192 1.8E-21 T 11-10-2018 Patl_3381 d38912e899354c313de4737f284f0c1a 282 PIRSF PIRSF018249 1 281 3.7E-77 T 11-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 Patl_3381 d38912e899354c313de4737f284f0c1a 282 Pfam PF13847 Methyltransferase domain 93 159 3.0E-7 T 11-10-2018 IPR025714 Methyltransferase domain Patl_3381 d38912e899354c313de4737f284f0c1a 282 Gene3D G3DSA:3.40.50.150 1 281 9.9E-59 T 11-10-2018 Patl_3381 d38912e899354c313de4737f284f0c1a 282 SUPERFAMILY SSF53335 1 254 2.64E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_1146 86599b288b546c067a45709b14534ca8 221 Gene3D G3DSA:3.90.1720.10 3 195 1.7E-19 T 11-10-2018 Patl_1146 86599b288b546c067a45709b14534ca8 221 SUPERFAMILY SSF54001 18 193 4.58E-17 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Patl_3140 f4f5ab137a923db0bcec240f72d43867 186 Pfam PF07209 Protein of unknown function (DUF1415) 10 176 1.4E-61 T 11-10-2018 IPR009858 Protein of unknown function DUF1415 Patl_2202 40decdb078a9bcd8e2843ea8b87805cf 207 Gene3D G3DSA:3.40.50.1820 12 186 2.5E-24 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2202 40decdb078a9bcd8e2843ea8b87805cf 207 SUPERFAMILY SSF53474 7 178 2.98E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_4194 456f99c137ae2dd355a5cd946a0e347e 347 SUPERFAMILY SSF48452 197 329 6.21E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_4194 456f99c137ae2dd355a5cd946a0e347e 347 Gene3D G3DSA:3.90.70.10 55 182 2.8E-5 T 11-10-2018 Patl_4194 456f99c137ae2dd355a5cd946a0e347e 347 Pfam PF13529 Peptidase_C39 like family 44 156 4.0E-8 T 11-10-2018 IPR039564 Peptidase C39-like Patl_4194 456f99c137ae2dd355a5cd946a0e347e 347 Gene3D G3DSA:1.25.40.10 183 339 4.5E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_1180 b5b98f16295853427959aa79e344c3e9 271 SUPERFAMILY SSF52540 8 271 2.28E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1180 b5b98f16295853427959aa79e344c3e9 271 Gene3D G3DSA:3.40.50.300 1 271 7.7E-59 T 11-10-2018 Patl_1180 b5b98f16295853427959aa79e344c3e9 271 Pfam PF00685 Sulfotransferase domain 10 211 3.7E-13 T 11-10-2018 IPR000863 Sulfotransferase domain GO:0008146 Patl_4193 2ea9a21c03827f5bebf16ab486d0fbae 377 Gene3D G3DSA:3.40.710.30 7 377 7.1E-115 T 11-10-2018 Patl_4193 2ea9a21c03827f5bebf16ab486d0fbae 377 Pfam PF00144 Beta-lactamase 27 363 7.9E-64 T 11-10-2018 IPR001466 Beta-lactamase-related Patl_4193 2ea9a21c03827f5bebf16ab486d0fbae 377 SUPERFAMILY SSF56601 11 369 1.02E-64 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Patl_2193 96367b264912bbb419604c62101c4733 233 SUPERFAMILY SSF55166 19 179 9.81E-20 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Patl_2193 96367b264912bbb419604c62101c4733 233 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 22 178 2.9E-35 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 Patl_2193 96367b264912bbb419604c62101c4733 233 Gene3D G3DSA:3.30.1380.10 1 188 1.8E-35 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Patl_2773 f343d81f78bfd3eac6405807abdfdce4 198 Pfam PF00027 Cyclic nucleotide-binding domain 33 120 4.4E-12 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Patl_2773 f343d81f78bfd3eac6405807abdfdce4 198 SUPERFAMILY SSF51206 19 136 1.06E-22 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like Patl_2773 f343d81f78bfd3eac6405807abdfdce4 198 SMART SM00100 14 133 0.0048 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain Patl_2773 f343d81f78bfd3eac6405807abdfdce4 198 Gene3D G3DSA:2.60.120.10 2 161 4.9E-27 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_3804 b97eeaccd7af928ad4646788074420e4 208 Gene3D G3DSA:1.20.120.1630 9 208 3.2E-20 T 11-10-2018 Patl_3804 b97eeaccd7af928ad4646788074420e4 208 Pfam PF04191 Phospholipid methyltransferase 98 194 2.1E-11 T 11-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 Patl_3804 b97eeaccd7af928ad4646788074420e4 208 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 164 208 2.0E-18 T 11-10-2018 Patl_1921 6ecf92609f7f64dd6278d22a86a37cfd 131 Pfam PF12514 Protein of unknown function (DUF3718) 33 100 1.2E-23 T 11-10-2018 IPR022193 Protein of unknown function DUF3718 Patl_2486 9ed075fdf6be2759c6542e9af421e754 142 Pfam PF09842 Predicted membrane protein (DUF2069) 11 113 3.9E-32 T 11-10-2018 IPR018643 Protein of unknown function DUF2069, membrane Patl_1683 2b608db85837480bc3e6f84ed80a66eb 275 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 10 250 1.4E-46 T 11-10-2018 IPR008775 Phytanoyl-CoA dioxygenase Patl_1683 2b608db85837480bc3e6f84ed80a66eb 275 SUPERFAMILY SSF51197 1 271 4.85E-63 T 11-10-2018 Patl_1683 2b608db85837480bc3e6f84ed80a66eb 275 Gene3D G3DSA:2.60.120.620 1 274 2.6E-94 T 11-10-2018 Patl_0697 c42432300f7986d87e35f7c4feaa35e3 344 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 18 333 7.4E-86 T 11-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid Patl_0697 c42432300f7986d87e35f7c4feaa35e3 344 Pfam PF05125 Phage major capsid protein, P2 family 12 334 5.0E-118 T 11-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid Patl_0083 ac7f3eb724b0350d307f118f7906ec84 161 Pfam PF04186 FxsA cytoplasmic membrane protein 1 105 6.3E-36 T 11-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 Patl_2762 ffebfad3a95ecde78b10cd9a8ac3e481 329 Gene3D G3DSA:3.20.20.70 20 312 8.3E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_2762 ffebfad3a95ecde78b10cd9a8ac3e481 329 Pfam PF00682 HMGL-like 25 301 6.7E-47 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Patl_2762 ffebfad3a95ecde78b10cd9a8ac3e481 329 SUPERFAMILY SSF51569 23 307 7.69E-64 T 11-10-2018 Patl_0476 2bf43a2582d2c93f8d55e0fa8a78eb74 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 1.3E-44 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Patl_0476 2bf43a2582d2c93f8d55e0fa8a78eb74 136 SUPERFAMILY SSF54686 3 133 2.22E-52 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Patl_0476 2bf43a2582d2c93f8d55e0fa8a78eb74 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Patl_0476 2bf43a2582d2c93f8d55e0fa8a78eb74 136 Gene3D G3DSA:3.90.1170.10 1 136 7.9E-53 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Patl_0476 2bf43a2582d2c93f8d55e0fa8a78eb74 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 1.4E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0476 2bf43a2582d2c93f8d55e0fa8a78eb74 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 1.4E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0476 2bf43a2582d2c93f8d55e0fa8a78eb74 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 1.4E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0476 2bf43a2582d2c93f8d55e0fa8a78eb74 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 1.4E-38 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0476 2bf43a2582d2c93f8d55e0fa8a78eb74 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 1.7E-55 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_0476 2bf43a2582d2c93f8d55e0fa8a78eb74 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.056 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Patl_3216 3429ca24fd22a1c0c28c8c66f2d4c056 414 Pfam PF13439 Glycosyltransferase Family 4 22 217 5.6E-17 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Patl_3216 3429ca24fd22a1c0c28c8c66f2d4c056 414 Gene3D G3DSA:3.40.50.2000 220 397 2.1E-28 T 11-10-2018 Patl_3216 3429ca24fd22a1c0c28c8c66f2d4c056 414 Pfam PF00534 Glycosyl transferases group 1 234 394 3.1E-23 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Patl_3216 3429ca24fd22a1c0c28c8c66f2d4c056 414 SUPERFAMILY SSF53756 8 414 1.61E-54 T 11-10-2018 Patl_3838 593f68a45c2dce977ee0dd80d8935ca0 292 SUPERFAMILY SSF103481 191 291 3.01E-11 T 11-10-2018 Patl_3838 593f68a45c2dce977ee0dd80d8935ca0 292 SUPERFAMILY SSF103481 38 144 6.28E-5 T 11-10-2018 Patl_3838 593f68a45c2dce977ee0dd80d8935ca0 292 Pfam PF00892 EamA-like transporter family 153 290 7.6E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Patl_2585 137561b3dcc527dc9b12965bc6d4de71 790 Pfam PF00593 TonB dependent receptor 415 788 2.8E-31 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_2585 137561b3dcc527dc9b12965bc6d4de71 790 SUPERFAMILY SSF56935 36 788 1.07E-75 T 11-10-2018 Patl_2585 137561b3dcc527dc9b12965bc6d4de71 790 Gene3D G3DSA:2.170.130.10 51 179 2.2E-12 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_2585 137561b3dcc527dc9b12965bc6d4de71 790 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 165 1.2E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0332 02cbe5fffc50b4560a5c442f695a2c6d 406 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 37 392 4.3E-98 T 11-10-2018 Patl_0332 02cbe5fffc50b4560a5c442f695a2c6d 406 SUPERFAMILY SSF48208 10 404 7.29E-121 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Patl_0332 02cbe5fffc50b4560a5c442f695a2c6d 406 Gene3D G3DSA:1.50.10.10 7 404 3.1E-140 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Patl_0140 7b213cf6204b79530616c3fc5e639703 177 Pfam PF00719 Inorganic pyrophosphatase 18 174 8.7E-55 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Patl_0140 7b213cf6204b79530616c3fc5e639703 177 Gene3D G3DSA:3.90.80.10 1 175 5.7E-71 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Patl_0140 7b213cf6204b79530616c3fc5e639703 177 SUPERFAMILY SSF50324 3 174 5.89E-69 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Patl_0140 7b213cf6204b79530616c3fc5e639703 177 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.89 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Patl_0313 2f21bf54cc3f3d143d6d298930822dbe 496 Pfam PF03929 PepSY-associated TM region 24 366 6.4E-56 T 11-10-2018 IPR005625 PepSY-associated TM protein Patl_2378 28bcd7ad4f054a0ac2618ba1604e7705 192 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 53 67 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Patl_2378 28bcd7ad4f054a0ac2618ba1604e7705 192 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 22 192 6.7E-56 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Patl_2378 28bcd7ad4f054a0ac2618ba1604e7705 192 Gene3D G3DSA:3.30.70.1560 82 181 2.1E-41 T 11-10-2018 Patl_2378 28bcd7ad4f054a0ac2618ba1604e7705 192 SUPERFAMILY SSF55120 17 191 1.02E-42 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_2378 28bcd7ad4f054a0ac2618ba1604e7705 192 Gene3D G3DSA:3.30.70.580 6 81 6.3E-27 T 11-10-2018 Patl_2378 28bcd7ad4f054a0ac2618ba1604e7705 192 Pfam PF00849 RNA pseudouridylate synthase 18 162 1.7E-15 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Patl_4178 16eca350905f619398af95a05567db0b 368 Pfam PF02661 Fic/DOC family 109 208 3.1E-18 T 11-10-2018 IPR003812 Fido domain Patl_4178 16eca350905f619398af95a05567db0b 368 Gene3D G3DSA:1.10.3290.10 66 264 2.9E-30 T 11-10-2018 IPR036597 Fido-like domain superfamily Patl_4178 16eca350905f619398af95a05567db0b 368 SUPERFAMILY SSF140931 99 271 2.62E-28 T 11-10-2018 IPR036597 Fido-like domain superfamily Patl_0108 56abb4a0fe87ed03fb448c64c8adffa7 249 Gene3D G3DSA:1.10.287.460 24 138 4.2E-25 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 Patl_0108 56abb4a0fe87ed03fb448c64c8adffa7 249 SUPERFAMILY SSF54534 36 241 5.53E-62 T 11-10-2018 Patl_0108 56abb4a0fe87ed03fb448c64c8adffa7 249 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 154 239 5.1E-29 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Patl_0108 56abb4a0fe87ed03fb448c64c8adffa7 249 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 30 145 6.6E-28 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 Patl_0108 56abb4a0fe87ed03fb448c64c8adffa7 249 Gene3D G3DSA:3.10.50.40 140 244 2.2E-44 T 11-10-2018 Patl_3002 0d0b5821ab00164dff056b9be2a390c3 153 Pfam PF04024 PspC domain 7 63 7.1E-17 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal Patl_3002 0d0b5821ab00164dff056b9be2a390c3 153 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 6 153 5.8E-42 T 11-10-2018 IPR014320 Phage shock protein, PspC Patl_2542 41958703b3d61fef8ff2654409673042 206 Pfam PF01810 LysE type translocator 17 205 1.0E-32 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Patl_2451 eb3ca6164ee45c6b17dec4008d8510c4 222 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 215 1.3E-46 T 11-10-2018 IPR006214 Bax inhibitor 1-related Patl_1920 ae21b45b4b67974540202c7deaedbe36 346 SMART SM00267 168 340 2.8E-48 T 11-10-2018 IPR000160 GGDEF domain Patl_1920 ae21b45b4b67974540202c7deaedbe36 346 Gene3D G3DSA:3.30.70.270 173 345 2.7E-51 T 11-10-2018 Patl_1920 ae21b45b4b67974540202c7deaedbe36 346 Pfam PF00990 Diguanylate cyclase, GGDEF domain 180 336 2.4E-41 T 11-10-2018 IPR000160 GGDEF domain Patl_1920 ae21b45b4b67974540202c7deaedbe36 346 SUPERFAMILY SSF55073 184 342 1.57E-45 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_1920 ae21b45b4b67974540202c7deaedbe36 346 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 178 339 1.1E-48 T 11-10-2018 IPR000160 GGDEF domain Patl_0294 c7eecf2ad12b2f809f35191526f75be8 465 SUPERFAMILY SSF51004 57 452 1.02E-11 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily Patl_3189 9be33f0dd9b879c8c950a2936e518c4d 76 Gene3D G3DSA:1.10.10.1130 1 76 4.3E-28 T 11-10-2018 Patl_3189 9be33f0dd9b879c8c950a2936e518c4d 76 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 2.2E-29 T 11-10-2018 IPR021250 Protein of unknown function DUF2789 Patl_0126 5b2b6619ddaf591ebd164dec55797953 586 Gene3D G3DSA:3.20.20.80 21 410 1.7E-103 T 11-10-2018 Patl_0126 5b2b6619ddaf591ebd164dec55797953 586 Gene3D G3DSA:2.60.120.260 411 586 4.2E-38 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0126 5b2b6619ddaf591ebd164dec55797953 586 Pfam PF03644 Glycosyl hydrolase family 85 95 428 2.1E-84 T 11-10-2018 IPR005201 Glycoside hydrolase, family 85 GO:0005737|GO:0033925 KEGG: 00511+3.2.1.96|Reactome: R-HSA-532668 Patl_2212 208abc4a873994c8eefb9650eb88610f 186 Gene3D G3DSA:3.40.50.880 3 184 4.6E-41 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_2212 208abc4a873994c8eefb9650eb88610f 186 Pfam PF01965 DJ-1/PfpI family 9 178 5.6E-38 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Patl_2212 208abc4a873994c8eefb9650eb88610f 186 SUPERFAMILY SSF52317 9 181 6.96E-35 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_0758 10b0fe20a03739ad8146ad3387f09d1f 577 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 12 572 4.0E-223 T 11-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 Patl_0758 10b0fe20a03739ad8146ad3387f09d1f 577 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 12 575 0.0 T 11-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 Patl_0758 10b0fe20a03739ad8146ad3387f09d1f 577 PIRSF PIRSF000719 4 577 8.9E-199 T 11-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 Patl_0758 10b0fe20a03739ad8146ad3387f09d1f 577 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 4 576 40.943 T 11-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 Patl_3253 8bc20996e8e6099750b3813536b77f45 78 Pfam PF04995 Heme exporter protein D (CcmD) 13 54 3.4E-17 T 11-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 Patl_3253 8bc20996e8e6099750b3813536b77f45 78 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 55 1.2E-17 T 11-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 Patl_1493 a28c4b9ba5f2635c101957eea0c3cbf0 129 SUPERFAMILY SSF81324 7 119 7.06E-18 T 11-10-2018 Patl_1493 a28c4b9ba5f2635c101957eea0c3cbf0 129 Gene3D G3DSA:1.10.287.70 13 121 9.8E-13 T 11-10-2018 Patl_1493 a28c4b9ba5f2635c101957eea0c3cbf0 129 Pfam PF07885 Ion channel 37 113 1.7E-12 T 11-10-2018 IPR013099 Potassium channel domain Patl_1729 03ea90c8f3ae81304b4f2a66f22e14fa 177 Pfam PF04945 YHS domain 62 93 6.0E-7 T 11-10-2018 IPR007029 YHS domain Patl_1147 32b7a9704e49bf12c3d7aa98ec89f731 104 Pfam PF12514 Protein of unknown function (DUF3718) 36 96 7.8E-22 T 11-10-2018 IPR022193 Protein of unknown function DUF3718 Patl_1433 e7d7a353732100b38820f3dafc07b9f6 411 Pfam PF06738 Putative threonine/serine exporter 15 255 1.1E-62 T 11-10-2018 IPR010619 Putative threonine/serine exporter Patl_1433 e7d7a353732100b38820f3dafc07b9f6 411 Pfam PF12821 Threonine/Serine exporter, ThrE 280 403 8.5E-15 T 11-10-2018 IPR024528 Threonine/Serine exporter, ThrE Patl_4064 d79fce36317158628e1daeb4d3142291 392 SUPERFAMILY SSF63829 188 307 1.31E-5 T 11-10-2018 Patl_2265 178493bfd0b4a0ef235ca833b0226984 119 Pfam PF11042 Protein of unknown function (DUF2750) 10 113 4.4E-31 T 11-10-2018 IPR021284 Protein of unknown function DUF2750 Patl_1126 76fe7096564f8abd3fcf534822588f9f 155 Gene3D G3DSA:3.10.450.50 11 155 4.9E-76 T 11-10-2018 Patl_1126 76fe7096564f8abd3fcf534822588f9f 155 Pfam PF07080 Protein of unknown function (DUF1348) 8 137 5.6E-64 T 11-10-2018 IPR009783 Protein of unknown function DUF1348 Patl_1126 76fe7096564f8abd3fcf534822588f9f 155 SUPERFAMILY SSF54427 2 155 1.37E-78 T 11-10-2018 IPR032710 NTF2-like domain superfamily Patl_0660 81eb774ffd9551ec4fb9aa1450dc2063 241 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 25 212 2.3E-28 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 Patl_0660 81eb774ffd9551ec4fb9aa1450dc2063 241 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 6 219 4.5E-46 T 11-10-2018 IPR010239 Conserved hypothetical protein CHP02001 Patl_1945 aec157d05c0f384ec90ffb8abbec1ae7 420 SUPERFAMILY SSF53098 18 396 1.9E-60 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_1945 aec157d05c0f384ec90ffb8abbec1ae7 420 Pfam PF01609 Transposase DDE domain 109 345 4.9E-19 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Patl_1303 edd524c3f6be551e66e59301813dd8be 1096 Gene3D G3DSA:3.30.70.1070 1000 1080 1.3E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Patl_1303 edd524c3f6be551e66e59301813dd8be 1096 SUPERFAMILY SSF117074 785 829 4.58E-5 T 11-10-2018 Patl_4084 337d2327b181b5e9a188a6cf4dd872ea 307 Pfam PF01226 Formate/nitrite transporter 61 299 1.8E-47 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 Patl_4084 337d2327b181b5e9a188a6cf4dd872ea 307 Gene3D G3DSA:1.20.1080.10 55 306 9.0E-47 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Patl_2386 57566c7bec023d2f9b5f977ea99821e6 360 Pfam PF06580 Histidine kinase 159 238 2.1E-26 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Patl_2386 57566c7bec023d2f9b5f977ea99821e6 360 Gene3D G3DSA:3.30.565.10 214 351 1.0E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_2386 57566c7bec023d2f9b5f977ea99821e6 360 SUPERFAMILY SSF55874 214 350 8.38E-16 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Patl_0271 9974494ab75f67a006032c0c8da03cf0 101 Pfam PF06127 Protein of unknown function (DUF962) 5 99 2.7E-37 T 11-10-2018 IPR009305 Protein of unknown function DUF962 Patl_2726 35539cc744acf32b47f8c8ef93f80b2e 286 SUPERFAMILY SSF103481 36 131 2.35E-5 T 11-10-2018 Patl_2726 35539cc744acf32b47f8c8ef93f80b2e 286 SUPERFAMILY SSF103481 176 275 4.38E-5 T 11-10-2018 Patl_2726 35539cc744acf32b47f8c8ef93f80b2e 286 Pfam PF00892 EamA-like transporter family 2 128 2.9E-6 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Patl_1705 2455f15b802f7ede68a2418c6b47b5ef 402 Pfam PF04403 Paraquat-inducible protein A 76 226 1.0E-35 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like Patl_1705 2455f15b802f7ede68a2418c6b47b5ef 402 Pfam PF04403 Paraquat-inducible protein A 246 401 1.1E-56 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like Patl_2890 ab50eb76a8efc3e268b574bd0f5832e4 189 Gene3D G3DSA:2.40.128.110 21 189 1.3E-47 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Patl_2890 ab50eb76a8efc3e268b574bd0f5832e4 189 SMART SM00867 22 187 1.8E-67 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Patl_2890 ab50eb76a8efc3e268b574bd0f5832e4 189 Pfam PF04264 YceI-like domain 23 184 1.3E-34 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Patl_2890 ab50eb76a8efc3e268b574bd0f5832e4 189 SUPERFAMILY SSF101874 20 189 4.32E-51 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Patl_0394 d04c6514395de4205d722b1d1d953154 292 Pfam PF04784 Protein of unknown function, DUF547 90 205 2.6E-21 T 11-10-2018 IPR006869 Domain of unknown function DUF547 Patl_0041 eb7c532b5476fcc242c8717fa07549f6 107 Pfam PF08850 Domain of unknown function (DUF1820) 7 100 1.1E-40 T 11-10-2018 IPR014949 Protein of unknown function DUF1820 Patl_0041 eb7c532b5476fcc242c8717fa07549f6 107 PIRSF PIRSF028538 1 106 1.0E-41 T 11-10-2018 IPR014949 Protein of unknown function DUF1820 Patl_1469 d86f6027811409b983f58bcf49cc57e9 143 SUPERFAMILY SSF52402 5 143 1.09E-29 T 11-10-2018 Patl_1469 d86f6027811409b983f58bcf49cc57e9 143 Gene3D G3DSA:3.40.50.620 2 143 3.9E-31 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_1469 d86f6027811409b983f58bcf49cc57e9 143 PRINTS PR01438 Universal stress protein signature 103 115 1.7E-9 T 11-10-2018 IPR006015 Universal stress protein A Patl_1469 d86f6027811409b983f58bcf49cc57e9 143 PRINTS PR01438 Universal stress protein signature 121 143 1.7E-9 T 11-10-2018 IPR006015 Universal stress protein A Patl_1469 d86f6027811409b983f58bcf49cc57e9 143 PRINTS PR01438 Universal stress protein signature 3 21 1.7E-9 T 11-10-2018 IPR006015 Universal stress protein A Patl_1469 d86f6027811409b983f58bcf49cc57e9 143 Pfam PF00582 Universal stress protein family 4 143 1.4E-20 T 11-10-2018 IPR006016 UspA Patl_3535 1360e3333ed6a877fcd1ab5a6a65ff33 330 Pfam PF09935 Protein of unknown function (DUF2167) 66 306 1.2E-96 T 11-10-2018 IPR018682 Protein of unknown function DUF2167, membrane Patl_2426 01aa2548e0be746b90a2f8883fc39dd1 309 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 21 260 1.2E-77 T 11-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC Patl_2426 01aa2548e0be746b90a2f8883fc39dd1 309 Pfam PF13478 XdhC Rossmann domain 109 259 1.5E-31 T 11-10-2018 IPR027051 XdhC Rossmann domain Patl_2426 01aa2548e0be746b90a2f8883fc39dd1 309 Pfam PF02625 XdhC and CoxI family 14 80 5.6E-17 T 11-10-2018 IPR003777 XdhC- CoxI Patl_2426 01aa2548e0be746b90a2f8883fc39dd1 309 Gene3D G3DSA:3.40.50.720 108 263 1.8E-33 T 11-10-2018 Patl_1639 c4f22d3137b6906cda2a1712cb184700 261 SUPERFAMILY SSF81901 68 221 2.35E-5 T 11-10-2018 Patl_1639 c4f22d3137b6906cda2a1712cb184700 261 Pfam PF11207 Protein of unknown function (DUF2989) 13 214 1.0E-72 T 11-10-2018 IPR021372 Protein of unknown function DUF2989 Patl_1523 675a9a39f4a8402b98233f005eeb057b 180 Pfam PF00293 NUDIX domain 44 153 1.9E-7 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Patl_1523 675a9a39f4a8402b98233f005eeb057b 180 SUPERFAMILY SSF55811 5 177 3.66E-37 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Patl_1523 675a9a39f4a8402b98233f005eeb057b 180 Gene3D G3DSA:3.90.79.10 2 177 1.1E-42 T 11-10-2018 Patl_2050 f329703327bea518f6c89fb8b87fc235 103 Gene3D G3DSA:2.60.120.10 4 102 7.0E-15 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_2050 f329703327bea518f6c89fb8b87fc235 103 Pfam PF06052 3-hydroxyanthranilic acid dioxygenase 34 100 9.4E-5 T 11-10-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 Patl_2050 f329703327bea518f6c89fb8b87fc235 103 SUPERFAMILY SSF51182 3 101 1.51E-14 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_3286 40b56f4bfe49a77ab5426662b71a6b69 368 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 58 136 5.1E-17 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 Patl_3286 40b56f4bfe49a77ab5426662b71a6b69 368 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 59 136 1.5E-16 T 11-10-2018 IPR006260 TonB/TolA, C-terminal Patl_3286 40b56f4bfe49a77ab5426662b71a6b69 368 Gene3D G3DSA:3.30.1150.10 36 137 4.3E-26 T 11-10-2018 Patl_3286 40b56f4bfe49a77ab5426662b71a6b69 368 SUPERFAMILY SSF74653 53 127 1.83E-23 T 11-10-2018 Patl_1822 00664e5ed7d79458d86ca63f3f19fd3d 756 Gene3D G3DSA:2.40.170.20 185 756 4.3E-46 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_1822 00664e5ed7d79458d86ca63f3f19fd3d 756 SUPERFAMILY SSF56935 42 756 1.76E-73 T 11-10-2018 Patl_1822 00664e5ed7d79458d86ca63f3f19fd3d 756 Gene3D G3DSA:2.170.130.10 42 173 7.4E-10 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_1822 00664e5ed7d79458d86ca63f3f19fd3d 756 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 167 2.6E-9 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0416 c81e2454642278718a843fcc9e82aeb0 226 Gene3D G3DSA:3.40.50.150 56 224 1.2E-20 T 11-10-2018 Patl_0416 c81e2454642278718a843fcc9e82aeb0 226 SUPERFAMILY SSF53335 50 189 2.18E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_0416 c81e2454642278718a843fcc9e82aeb0 226 Pfam PF01564 Spermine/spermidine synthase domain 58 181 3.2E-6 T 11-10-2018 Patl_0910 3fa6dcb438063f403ad4f1ae10504372 665 SUPERFAMILY SSF48208 89 399 8.79E-23 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Patl_0910 3fa6dcb438063f403ad4f1ae10504372 665 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 37 574 1.6E-142 T 11-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 Patl_0494 7a0d5a54b1d3d00428a1b3b5a82cf9e4 364 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 104 283 5.8E-35 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Patl_0494 7a0d5a54b1d3d00428a1b3b5a82cf9e4 364 Gene3D G3DSA:3.30.70.1230 96 301 3.6E-61 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_0494 7a0d5a54b1d3d00428a1b3b5a82cf9e4 364 SUPERFAMILY SSF48452 297 349 3.1E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0494 7a0d5a54b1d3d00428a1b3b5a82cf9e4 364 SUPERFAMILY SSF55073 101 289 6.75E-58 T 11-10-2018 IPR029787 Nucleotide cyclase Patl_0494 7a0d5a54b1d3d00428a1b3b5a82cf9e4 364 SMART SM00044 61 270 2.7E-20 T 11-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 Patl_0059 b653f1b2bfbdcca279a1f34bcdacf4a1 393 SUPERFAMILY SSF56935 28 393 3.85E-17 T 11-10-2018 Patl_3499 8f6bce21c8e1b8be1b3cd68d69ac7772 152 SUPERFAMILY SSF55729 21 136 2.57E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_3499 8f6bce21c8e1b8be1b3cd68d69ac7772 152 Gene3D G3DSA:3.40.630.30 4 140 7.2E-12 T 11-10-2018 Patl_3499 8f6bce21c8e1b8be1b3cd68d69ac7772 152 Pfam PF13673 Acetyltransferase (GNAT) domain 19 108 2.5E-6 T 11-10-2018 IPR000182 GNAT domain Patl_0621 714f6a3b621565b7e7621b3de29d3193 99 SUPERFAMILY SSF158757 1 77 4.71E-37 T 11-10-2018 IPR036810 SMc04008-like superfamily Patl_0621 714f6a3b621565b7e7621b3de29d3193 99 Gene3D G3DSA:1.10.3340.10 1 98 9.9E-47 T 11-10-2018 IPR036810 SMc04008-like superfamily Patl_0621 714f6a3b621565b7e7621b3de29d3193 99 Pfam PF06844 Protein of unknown function (DUF1244) 27 93 4.3E-38 T 11-10-2018 IPR023163 SMc04008-like domain Patl_3844 bc42aea2e55bb06f911ddea4a277d279 266 Pfam PF01925 Sulfite exporter TauE/SafE 12 263 2.0E-45 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Patl_2177 f17e74530d98764a96d9a35a4423e442 252 Pfam PF08241 Methyltransferase domain 51 142 1.7E-13 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Patl_2177 f17e74530d98764a96d9a35a4423e442 252 SUPERFAMILY SSF53335 4 250 6.91E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_2177 f17e74530d98764a96d9a35a4423e442 252 Gene3D G3DSA:3.40.50.150 12 251 1.4E-47 T 11-10-2018 Patl_2177 f17e74530d98764a96d9a35a4423e442 252 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 6 251 37.93 T 11-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 Patl_1050 67d5907835c89e77ec685c8267a6bd31 278 SUPERFAMILY SSF109604 11 265 1.88E-48 T 11-10-2018 Patl_1050 67d5907835c89e77ec685c8267a6bd31 278 Pfam PF08668 HDOD domain 22 211 1.1E-35 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Patl_1050 67d5907835c89e77ec685c8267a6bd31 278 Gene3D G3DSA:1.10.3210.10 1 275 3.6E-58 T 11-10-2018 Patl_1169 f4e243365599e4da37edee327c4cc785 527 SUPERFAMILY SSF57997 172 386 2.75E-8 T 11-10-2018 Patl_1169 f4e243365599e4da37edee327c4cc785 527 Pfam PF02706 Chain length determinant protein 11 96 3.6E-7 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Patl_1169 f4e243365599e4da37edee327c4cc785 527 TIGRFAM TIGR03007 pepcterm_ChnLen: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily 11 515 8.0E-158 T 11-10-2018 IPR014345 PEP-CTERM locus polysaccharide chain length determinant Patl_2053 b2b406046750dad9447646b4c330a2ab 274 Pfam PF01925 Sulfite exporter TauE/SafE 16 268 2.3E-51 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Patl_3418 e470fa42106e79b47f6a5d6fdc9d7d94 735 Pfam PF04453 Organic solvent tolerance protein 284 644 5.0E-95 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 Patl_3418 e470fa42106e79b47f6a5d6fdc9d7d94 735 Pfam PF03968 OstA-like protein 48 175 5.7E-9 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal Patl_3418 e470fa42106e79b47f6a5d6fdc9d7d94 735 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 7 713 20.243 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 Patl_3909 e2c5bf1a71416553cce64f090f4c1ed3 150 Pfam PF05899 Protein of unknown function (DUF861) 86 128 1.4E-7 T 11-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 Patl_3909 e2c5bf1a71416553cce64f090f4c1ed3 150 Gene3D G3DSA:2.60.120.10 19 137 2.7E-16 T 11-10-2018 IPR014710 RmlC-like jelly roll fold Patl_3909 e2c5bf1a71416553cce64f090f4c1ed3 150 SUPERFAMILY SSF51182 46 130 1.68E-10 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily Patl_2980 9eb2a02e5716efa2be5f2a8e813967a3 64 Pfam PF09962 Uncharacterized conserved protein (DUF2196) 2 62 1.1E-30 T 11-10-2018 IPR019240 Protein of unknown function DUF2196 Patl_2980 9eb2a02e5716efa2be5f2a8e813967a3 64 TIGRFAM TIGR03833 TIGR03833: conserved hypothetical protein 2 63 9.7E-33 T 11-10-2018 IPR019240 Protein of unknown function DUF2196 Patl_3585 959e6de805068ef42f18a6ee16c6353b 264 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 13 240 1.6E-64 T 11-10-2018 IPR023875 DNA metabolism protein, putative Patl_3585 959e6de805068ef42f18a6ee16c6353b 264 Pfam PF13566 Domain of unknown function (DUF4130 82 239 2.6E-38 T 11-10-2018 IPR025404 Domain of unknown function DUF4130 Patl_3612 4356954cb161cfac147733bb1a6516d2 141 SUPERFAMILY SSF52821 18 139 2.49E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Patl_3612 4356954cb161cfac147733bb1a6516d2 141 SMART SM00450 40 138 7.0E-19 T 11-10-2018 IPR001763 Rhodanese-like domain Patl_3612 4356954cb161cfac147733bb1a6516d2 141 Gene3D G3DSA:3.40.250.10 24 141 4.7E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily Patl_3612 4356954cb161cfac147733bb1a6516d2 141 Pfam PF00581 Rhodanese-like domain 44 134 2.7E-18 T 11-10-2018 IPR001763 Rhodanese-like domain Patl_3374 eac5bcaa4effc5d3f25dc4e945a9c0e4 309 Gene3D G3DSA:3.10.310.30 237 308 8.4E-6 T 11-10-2018 Patl_3374 eac5bcaa4effc5d3f25dc4e945a9c0e4 309 PIRSF PIRSF028235 1 309 2.5E-154 T 11-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 Patl_3374 eac5bcaa4effc5d3f25dc4e945a9c0e4 309 SUPERFAMILY SSF64182 4 306 3.66E-9 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily Patl_0712 1f01c4a1d4b691ea21b9e87b4503aab2 634 SUPERFAMILY SSF52266 124 347 6.48E-21 T 11-10-2018 Patl_0712 1f01c4a1d4b691ea21b9e87b4503aab2 634 Gene3D G3DSA:3.40.50.1110 150 349 2.3E-10 T 11-10-2018 IPR036514 SGNH hydrolase superfamily Patl_0712 1f01c4a1d4b691ea21b9e87b4503aab2 634 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 175 342 3.2E-6 T 11-10-2018 IPR005181 Sialate O-acetylesterase domain Patl_1956 b37b081786fd3102c862f7831edd8865 131 Pfam PF11948 Protein of unknown function (DUF3465) 17 131 8.1E-58 T 11-10-2018 IPR021856 Protein of unknown function DUF3465 Patl_1221 a7494945212df1b713ae24800e0d386b 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 9.2E-13 T 11-10-2018 IPR007140 Protein of unknown function DUF350 Patl_1221 a7494945212df1b713ae24800e0d386b 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 71 4.4E-14 T 11-10-2018 IPR007140 Protein of unknown function DUF350 Patl_2683 ab63e1ec9d7536c2a3e57760d296d1cb 522 Pfam PF00474 Sodium:solute symporter family 41 441 6.1E-72 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_2683 ab63e1ec9d7536c2a3e57760d296d1cb 522 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 41 441 5.5E-108 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_2683 ab63e1ec9d7536c2a3e57760d296d1cb 522 Gene3D G3DSA:1.20.1730.10 30 522 4.3E-165 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Patl_1875 1477576d853021f6cf84bdeccd1033a8 211 SUPERFAMILY SSF51735 2 203 3.01E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_1875 1477576d853021f6cf84bdeccd1033a8 211 Gene3D G3DSA:3.40.50.720 1 211 2.3E-56 T 11-10-2018 Patl_1875 1477576d853021f6cf84bdeccd1033a8 211 Pfam PF13460 NAD(P)H-binding 8 188 2.6E-46 T 11-10-2018 IPR016040 NAD(P)-binding domain Patl_3038 40098253c9a5398978a84bc92186131c 166 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 56 122 1.9E-19 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Patl_3038 40098253c9a5398978a84bc92186131c 166 Pfam PF04347 Flagellar biosynthesis protein, FliO 69 145 2.3E-17 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Patl_2814 740a535c1b162c387a65c06aa37446f2 61 Gene3D G3DSA:3.10.450.50 27 60 6.2E-8 T 11-10-2018 Patl_2814 740a535c1b162c387a65c06aa37446f2 61 SUPERFAMILY SSF103642 38 59 1.64E-8 T 11-10-2018 Patl_2814 740a535c1b162c387a65c06aa37446f2 61 Pfam PF02810 SEC-C motif 41 59 1.8E-7 T 11-10-2018 IPR004027 SEC-C motif Patl_0934 f926111ae4d9eb8344d255f3d2e4ac32 308 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 22 307 2.8E-74 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Patl_0934 f926111ae4d9eb8344d255f3d2e4ac32 308 Pfam PF16868 NMT1-like family 27 307 9.2E-72 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family Patl_0934 f926111ae4d9eb8344d255f3d2e4ac32 308 SUPERFAMILY SSF53850 23 307 6.32E-59 T 11-10-2018 Patl_0934 f926111ae4d9eb8344d255f3d2e4ac32 308 Gene3D G3DSA:3.40.190.10 27 307 5.7E-80 T 11-10-2018 Patl_0934 f926111ae4d9eb8344d255f3d2e4ac32 308 Gene3D G3DSA:3.40.190.10 109 245 5.7E-80 T 11-10-2018 Patl_0410 87fe4251ac7ee51ae5a32430ad6b1c82 272 Pfam PF03301 Tryptophan 2,3-dioxygenase 25 137 4.8E-22 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 Patl_0410 87fe4251ac7ee51ae5a32430ad6b1c82 272 SUPERFAMILY SSF140959 26 236 7.85E-54 T 11-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 Patl_0410 87fe4251ac7ee51ae5a32430ad6b1c82 272 Gene3D G3DSA:1.20.58.480 24 243 2.1E-46 T 11-10-2018 Patl_1413 93c25c7f1ab875bb8cccfdf0adc68f92 104 SUPERFAMILY SSF47413 44 91 1.21E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_1413 93c25c7f1ab875bb8cccfdf0adc68f92 104 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 25 101 3.5E-9 T 11-10-2018 IPR032758 Antitoxin MqsA/HigA-2 Patl_1413 93c25c7f1ab875bb8cccfdf0adc68f92 104 Gene3D G3DSA:1.10.260.40 5 101 1.8E-18 T 11-10-2018 Patl_2514 6ed75553899e8d252d961120ef1b35b3 453 Pfam PF06271 RDD family 327 416 1.1E-16 T 11-10-2018 IPR010432 RDD Patl_4074 10f1b7a8ab1120866e855853096c34b7 276 Gene3D G3DSA:3.10.310.10 5 272 9.5E-104 T 11-10-2018 Patl_4074 10f1b7a8ab1120866e855853096c34b7 276 Pfam PF01678 Diaminopimelate epimerase 154 268 1.4E-29 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Patl_4074 10f1b7a8ab1120866e855853096c34b7 276 Pfam PF01678 Diaminopimelate epimerase 5 124 1.6E-34 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Patl_4074 10f1b7a8ab1120866e855853096c34b7 276 Gene3D G3DSA:3.10.310.10 117 263 9.5E-104 T 11-10-2018 Patl_4074 10f1b7a8ab1120866e855853096c34b7 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Patl_4074 10f1b7a8ab1120866e855853096c34b7 276 SUPERFAMILY SSF54506 3 276 3.0E-51 T 11-10-2018 Patl_4074 10f1b7a8ab1120866e855853096c34b7 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 275 2.5E-98 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Patl_4074 10f1b7a8ab1120866e855853096c34b7 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 38.397 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Patl_2784 f66a2d8eea1e37f1f66bb420e6ef1c83 200 Pfam PF13875 Domain of unknown function (DUF4202) 7 194 2.6E-67 T 11-10-2018 IPR025255 Protein of unknown function DUF4202 Patl_2239 db88fdf0538fc8089248aba6ba0df16f 233 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Patl_2239 db88fdf0538fc8089248aba6ba0df16f 233 SMART SM00382 27 214 1.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain Patl_2239 db88fdf0538fc8089248aba6ba0df16f 233 Gene3D G3DSA:3.40.50.300 1 232 4.5E-65 T 11-10-2018 Patl_2239 db88fdf0538fc8089248aba6ba0df16f 233 SUPERFAMILY SSF52540 2 222 2.73E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2239 db88fdf0538fc8089248aba6ba0df16f 233 Pfam PF00005 ABC transporter 18 166 1.4E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Patl_1148 21c35d7bb7a169d99e48015030e5b15a 1007 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 990 1007 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site Patl_1148 21c35d7bb7a169d99e48015030e5b15a 1007 SUPERFAMILY SSF56935 116 1007 2.2E-60 T 11-10-2018 Patl_1148 21c35d7bb7a169d99e48015030e5b15a 1007 Pfam PF07715 TonB-dependent Receptor Plug Domain 134 236 1.4E-5 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_1148 21c35d7bb7a169d99e48015030e5b15a 1007 Gene3D G3DSA:2.170.130.10 110 241 6.8E-8 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_0699 8e2a0e2982396d928382a750caae9bf7 151 Pfam PF05926 Phage head completion protein (GPL) 15 150 4.6E-32 T 11-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 Patl_3085 7c3870599fad517e086e6642cb771bab 274 Pfam PF00700 Bacterial flagellin C-terminal helical region 189 273 2.6E-27 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Patl_3085 7c3870599fad517e086e6642cb771bab 274 PRINTS PR00207 Flagellin signature 37 54 1.8E-22 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Patl_3085 7c3870599fad517e086e6642cb771bab 274 PRINTS PR00207 Flagellin signature 111 134 1.8E-22 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Patl_3085 7c3870599fad517e086e6642cb771bab 274 PRINTS PR00207 Flagellin signature 76 95 1.8E-22 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Patl_3085 7c3870599fad517e086e6642cb771bab 274 SUPERFAMILY SSF64518 1 273 4.97E-92 T 11-10-2018 Patl_3085 7c3870599fad517e086e6642cb771bab 274 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 2.8E-39 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Patl_3085 7c3870599fad517e086e6642cb771bab 274 Gene3D G3DSA:1.10.8.410 226 273 5.9E-23 T 11-10-2018 Patl_3085 7c3870599fad517e086e6642cb771bab 274 Gene3D G3DSA:1.20.1330.10 50 225 3.6E-60 T 11-10-2018 Patl_0345 0620b5f8718b5b9fe3290f18fcf9956c 223 SUPERFAMILY SSF53474 4 221 3.96E-51 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0345 0620b5f8718b5b9fe3290f18fcf9956c 223 Gene3D G3DSA:3.40.50.1820 2 222 4.9E-69 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0345 0620b5f8718b5b9fe3290f18fcf9956c 223 Pfam PF02230 Phospholipase/Carboxylesterase 11 219 3.2E-58 T 11-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 Patl_4113 100c81bb03a7d472eb2bfc8f5922d5fe 138 SUPERFAMILY SSF53850 20 133 5.16E-9 T 11-10-2018 Patl_4113 100c81bb03a7d472eb2bfc8f5922d5fe 138 Gene3D G3DSA:3.40.190.10 23 135 4.3E-7 T 11-10-2018 Patl_1348 5486d23ae41ba06cd8269d44e5fc6461 181 SUPERFAMILY SSF102220 102 178 5.36E-6 T 11-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Patl_1229 afd3fe2252fa944173d669224b26503a 112 SMART SM01323 20 104 3.1E-39 T 11-10-2018 IPR003849 Preprotein translocase YajC Patl_1229 afd3fe2252fa944173d669224b26503a 112 Pfam PF02699 Preprotein translocase subunit 24 101 3.3E-26 T 11-10-2018 IPR003849 Preprotein translocase YajC Patl_1229 afd3fe2252fa944173d669224b26503a 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 22 104 2.0E-30 T 11-10-2018 IPR003849 Preprotein translocase YajC Patl_1229 afd3fe2252fa944173d669224b26503a 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 60 78 2.8E-14 T 11-10-2018 IPR003849 Preprotein translocase YajC Patl_1229 afd3fe2252fa944173d669224b26503a 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 22 42 2.8E-14 T 11-10-2018 IPR003849 Preprotein translocase YajC Patl_0950 e6d928a87a7d3974faf69c85508c813a 376 SUPERFAMILY SSF52096 17 345 1.72E-53 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Patl_0950 e6d928a87a7d3974faf69c85508c813a 376 Pfam PF16113 Enoyl-CoA hydratase/isomerase 19 359 6.9E-110 T 11-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 Patl_0950 e6d928a87a7d3974faf69c85508c813a 376 Gene3D G3DSA:3.90.226.10 3 376 1.0E-123 T 11-10-2018 Patl_4241 869642bedccc569ebd37f270367f86e7 246 Pfam PF02104 SURF1 family 18 218 2.1E-21 T 11-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Patl_2676 df0f7d35dfc52366568f974297f9140e 302 TIGRFAM TIGR03323 alt_F1F0_F1_gam: alternate F1F0 ATPase, F1 subunit gamma 11 298 9.2E-141 T 11-10-2018 IPR017709 Alternate ATP synthase, F1 complex, subunit gamma Patl_2676 df0f7d35dfc52366568f974297f9140e 302 Gene3D G3DSA:1.10.287.80 11 294 1.8E-57 T 11-10-2018 Patl_2676 df0f7d35dfc52366568f974297f9140e 302 Gene3D G3DSA:3.40.1380.10 66 213 1.8E-57 T 11-10-2018 Patl_2676 df0f7d35dfc52366568f974297f9140e 302 PRINTS PR00126 ATP synthase gamma subunit signature 245 264 3.3E-19 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2676 df0f7d35dfc52366568f974297f9140e 302 PRINTS PR00126 ATP synthase gamma subunit signature 276 297 3.3E-19 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2676 df0f7d35dfc52366568f974297f9140e 302 PRINTS PR00126 ATP synthase gamma subunit signature 173 190 3.3E-19 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2676 df0f7d35dfc52366568f974297f9140e 302 PRINTS PR00126 ATP synthase gamma subunit signature 82 101 3.3E-19 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2676 df0f7d35dfc52366568f974297f9140e 302 SUPERFAMILY SSF52943 11 298 1.83E-49 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2676 df0f7d35dfc52366568f974297f9140e 302 Pfam PF00231 ATP synthase 10 298 4.4E-57 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_3936 dc6cf08c0bd8b60db7ff0c4a2c15ce15 305 Gene3D G3DSA:3.40.50.620 16 292 1.2E-91 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_3936 dc6cf08c0bd8b60db7ff0c4a2c15ce15 305 SUPERFAMILY SSF52374 16 298 7.51E-77 T 11-10-2018 Patl_3936 dc6cf08c0bd8b60db7ff0c4a2c15ce15 305 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 44 2.2E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Patl_3936 dc6cf08c0bd8b60db7ff0c4a2c15ce15 305 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 31 2.2E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Patl_3936 dc6cf08c0bd8b60db7ff0c4a2c15ce15 305 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 2.2E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Patl_3936 dc6cf08c0bd8b60db7ff0c4a2c15ce15 305 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 2.2E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Patl_3936 dc6cf08c0bd8b60db7ff0c4a2c15ce15 305 PRINTS PR00987 Glutamyl-tRNA synthetase signature 48 61 2.2E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Patl_3936 dc6cf08c0bd8b60db7ff0c4a2c15ce15 305 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 16 280 3.2E-98 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 Patl_3936 dc6cf08c0bd8b60db7ff0c4a2c15ce15 305 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 19 243 3.1E-39 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Patl_3936 dc6cf08c0bd8b60db7ff0c4a2c15ce15 305 Gene3D G3DSA:3.40.50.620 91 227 1.2E-91 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Patl_4133 34723b01cbbd0197feac176e4c8eca35 188 SMART SM00749 37 100 6.8 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Patl_4133 34723b01cbbd0197feac176e4c8eca35 188 SMART SM00749 120 183 1.1E-5 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Patl_4133 34723b01cbbd0197feac176e4c8eca35 188 Pfam PF04972 BON domain 115 181 4.3E-16 T 11-10-2018 IPR007055 BON domain Patl_4133 34723b01cbbd0197feac176e4c8eca35 188 Pfam PF04972 BON domain 33 99 4.7E-17 T 11-10-2018 IPR007055 BON domain Patl_3257 6ddb13c5a3bbf3f088cb365c5bc20df4 868 Pfam PF02120 Flagellar hook-length control protein FliK 774 850 1.5E-11 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Patl_2304 1541d4b99e49ba21d34e9d03ef87e41c 102 PRINTS PR00355 Adrenodoxin signature 39 49 4.9E-6 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Patl_2304 1541d4b99e49ba21d34e9d03ef87e41c 102 PRINTS PR00355 Adrenodoxin signature 81 89 4.9E-6 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Patl_2304 1541d4b99e49ba21d34e9d03ef87e41c 102 PRINTS PR00355 Adrenodoxin signature 58 72 4.9E-6 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 Patl_2304 1541d4b99e49ba21d34e9d03ef87e41c 102 Gene3D G3DSA:3.10.20.30 1 102 2.6E-27 T 11-10-2018 IPR012675 Beta-grasp domain superfamily Patl_2304 1541d4b99e49ba21d34e9d03ef87e41c 102 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 89 5.2E-11 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Patl_2304 1541d4b99e49ba21d34e9d03ef87e41c 102 SUPERFAMILY SSF54292 1 99 6.97E-24 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Patl_3089 01c4f67cb07736a2f135cada750e870f 323 Gene3D G3DSA:2.120.10.10 21 209 2.9E-11 T 11-10-2018 Patl_4083 83ff3a23027d63d55e6b5960c6b8c8b8 190 Pfam PF09335 SNARE associated Golgi protein 52 156 1.3E-13 T 11-10-2018 IPR032816 SNARE associated Golgi protein Patl_0164 eb8c684d8bd99a953bbbd0a912eaa724 346 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 344 2.4E-137 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 Patl_0164 eb8c684d8bd99a953bbbd0a912eaa724 346 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 345 6.6E-134 T 11-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 Patl_0164 eb8c684d8bd99a953bbbd0a912eaa724 346 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 345 3.7E-130 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 Patl_0164 eb8c684d8bd99a953bbbd0a912eaa724 346 SUPERFAMILY SSF55729 1 345 7.75E-130 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_0164 eb8c684d8bd99a953bbbd0a912eaa724 346 Gene3D G3DSA:3.40.630.30 1 273 3.2E-116 T 11-10-2018 Patl_3780 8efd352ae9b2090f8a8c1e696c7f4562 221 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 42 207 3.7E-22 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain Patl_3780 8efd352ae9b2090f8a8c1e696c7f4562 221 SUPERFAMILY SSF52266 8 219 3.66E-49 T 11-10-2018 Patl_3780 8efd352ae9b2090f8a8c1e696c7f4562 221 Gene3D G3DSA:3.40.50.1110 4 221 9.0E-54 T 11-10-2018 IPR036514 SGNH hydrolase superfamily Patl_2150 0ce28e2ed1429fa45da3566faa487b27 70 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 6.2E-20 T 11-10-2018 IPR021249 Protein of unknown function DUF2788 Patl_2483 3300328739c71fded686c02dd4c50de8 156 Pfam PF00578 AhpC/TSA family 31 135 4.4E-13 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Patl_2483 3300328739c71fded686c02dd4c50de8 156 Gene3D G3DSA:3.40.30.10 22 155 5.0E-26 T 11-10-2018 Patl_2483 3300328739c71fded686c02dd4c50de8 156 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Patl_2483 3300328739c71fded686c02dd4c50de8 156 SUPERFAMILY SSF52833 2 151 7.88E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_3185 c091f1c88deadd7ac31f1ef4f7ee40e3 118 Gene3D G3DSA:1.20.1440.40 8 115 1.1E-30 T 11-10-2018 IPR036814 YqcC-like superfamily Patl_3185 c091f1c88deadd7ac31f1ef4f7ee40e3 118 SUPERFAMILY SSF158452 12 115 3.01E-30 T 11-10-2018 IPR036814 YqcC-like superfamily Patl_3185 c091f1c88deadd7ac31f1ef4f7ee40e3 118 Pfam PF04287 tRNA pseudouridine synthase C 13 111 3.5E-30 T 11-10-2018 IPR023376 YqcC-like domain Patl_1101 fb2918b5fd4f8f364975de00bfa29b0b 492 SUPERFAMILY SSF52402 193 289 2.03E-6 T 11-10-2018 Patl_4105 eabd77fb2d995944b96ea4d5ec2d0498 246 Pfam PF01925 Sulfite exporter TauE/SafE 11 235 7.2E-21 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Patl_1499 19fa8c01bdef6f5e00b49a9ce8b6e0f9 285 Gene3D G3DSA:3.40.960.10 19 124 3.7E-8 T 11-10-2018 Patl_2846 7c7514a7e642b783499b9fc8d61b8d12 335 Pfam PF01925 Sulfite exporter TauE/SafE 49 331 3.9E-50 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Patl_4109 c13e5a427a28e3b7cc28bb038e0811c9 139 SUPERFAMILY SSF53850 23 129 2.58E-5 T 11-10-2018 Patl_1896 bd69acae133d911da7eaef6e7c3a4683 249 SUPERFAMILY SSF53335 83 212 3.59E-12 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_1896 bd69acae133d911da7eaef6e7c3a4683 249 Gene3D G3DSA:3.40.50.150 62 194 1.7E-10 T 11-10-2018 Patl_2365 b11131c3084061eed15a8afd382c10e7 153 Pfam PF00075 RNase H 2 140 1.4E-49 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Patl_2365 b11131c3084061eed15a8afd382c10e7 153 Gene3D G3DSA:3.30.420.10 1 147 2.4E-58 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Patl_2365 b11131c3084061eed15a8afd382c10e7 153 SUPERFAMILY SSF53098 1 141 4.93E-58 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_2365 b11131c3084061eed15a8afd382c10e7 153 Hamap MF_00042 Ribonuclease H [rnhA]. 1 149 35.167 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 Patl_3420 5a5e0a9f5fa3eeaaf3c33641de54be25 326 SUPERFAMILY SSF53659 4 324 3.18E-106 T 11-10-2018 Patl_3420 5a5e0a9f5fa3eeaaf3c33641de54be25 326 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 322 6.9E-127 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Patl_3420 5a5e0a9f5fa3eeaaf3c33641de54be25 326 Gene3D G3DSA:3.40.718.10 1 326 1.1E-122 T 11-10-2018 Patl_3420 5a5e0a9f5fa3eeaaf3c33641de54be25 326 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 318 1.3E-106 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 Patl_3420 5a5e0a9f5fa3eeaaf3c33641de54be25 326 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 325 35.23 T 11-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 Patl_2850 1bfbfe76e472f60d2995e7ef4b461e33 167 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 87 146 6.8E-20 T 11-10-2018 IPR018637 Domain of unknown function DUF2059 Patl_1786 9bd244583d46e378e6a53e60ff235503 142 SUPERFAMILY SSF55729 14 136 9.81E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_1786 9bd244583d46e378e6a53e60ff235503 142 Gene3D G3DSA:3.40.630.30 9 142 3.5E-22 T 11-10-2018 Patl_1786 9bd244583d46e378e6a53e60ff235503 142 Pfam PF00583 Acetyltransferase (GNAT) family 29 131 2.6E-12 T 11-10-2018 IPR000182 GNAT domain Patl_3273 f442cf6018b6884283c1e732d0424c7d 154 PIRSF PIRSF003174 1 152 9.2E-51 T 11-10-2018 IPR010292 Uncharacterised protein family CreA Patl_3273 f442cf6018b6884283c1e732d0424c7d 154 Pfam PF05981 CreA protein 22 144 7.2E-44 T 11-10-2018 IPR010292 Uncharacterised protein family CreA Patl_2345 d4065dca840085aba425cd959f9a4cc0 134 Pfam PF00717 Peptidase S24-like 47 91 5.6E-8 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Patl_2345 d4065dca840085aba425cd959f9a4cc0 134 SUPERFAMILY SSF51306 4 125 1.03E-22 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Patl_2345 d4065dca840085aba425cd959f9a4cc0 134 Gene3D G3DSA:2.10.109.10 15 127 1.0E-31 T 11-10-2018 Patl_3655 654ca02246ccfab6476bd57832c10443 93 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 7 91 1.9E-33 T 11-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Patl_2322 d49e14420f61547259bc244b65d35f0e 310 Pfam PF05853 beta-keto acid cleavage enzyme 6 302 1.4E-107 T 11-10-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247 Patl_2322 d49e14420f61547259bc244b65d35f0e 310 Gene3D G3DSA:3.20.20.70 1 310 2.0E-124 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_0111 71175389ee418249e593715778ebb1ad 68 SUPERFAMILY SSF48695 11 48 7.12E-5 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily Patl_0111 71175389ee418249e593715778ebb1ad 68 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 4 62 1.4E-27 T 11-10-2018 IPR012658 Conserved hypothetical protein CHP02443 Patl_0111 71175389ee418249e593715778ebb1ad 68 Pfam PF09526 Probable metal-binding protein (DUF2387) 6 61 8.1E-20 T 11-10-2018 IPR012658 Conserved hypothetical protein CHP02443 Patl_3138 c21bcacea3ecaca123511d9ec2f14d13 210 SUPERFAMILY SSF55729 93 200 1.61E-8 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_3138 c21bcacea3ecaca123511d9ec2f14d13 210 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 6 63 2.0E-26 T 11-10-2018 IPR020137 Uncharacterised protein family HI1736 Patl_3138 c21bcacea3ecaca123511d9ec2f14d13 210 Gene3D G3DSA:3.40.630.30 76 204 4.5E-5 T 11-10-2018 Patl_4276 1198da8fac04712600a1ebbd4b388465 174 Gene3D G3DSA:2.30.270.10 84 149 7.5E-14 T 11-10-2018 IPR023361 DUF1285, beta-roll domain superfamily Patl_4276 1198da8fac04712600a1ebbd4b388465 174 PIRSF PIRSF029557 2 170 1.3E-56 T 11-10-2018 IPR010707 Protein of unknown function DUF1285 Patl_4276 1198da8fac04712600a1ebbd4b388465 174 Gene3D G3DSA:3.10.540.10 2 83 5.6E-35 T 11-10-2018 Patl_4276 1198da8fac04712600a1ebbd4b388465 174 Pfam PF06938 Protein of unknown function (DUF1285) 33 169 3.9E-48 T 11-10-2018 IPR010707 Protein of unknown function DUF1285 Patl_2403 a19984c64d77e9f06c675183f379bd92 393 Pfam PF03929 PepSY-associated TM region 6 369 1.2E-49 T 11-10-2018 IPR005625 PepSY-associated TM protein Patl_2339 988d0c438b3a5b7b68812cfa5a095c70 288 SUPERFAMILY SSF53474 44 286 9.2E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2339 988d0c438b3a5b7b68812cfa5a095c70 288 Pfam PF00756 Putative esterase 53 282 2.4E-27 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 Patl_2339 988d0c438b3a5b7b68812cfa5a095c70 288 Gene3D G3DSA:3.40.50.1820 44 288 3.7E-60 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_4176 9e2700e48e7ddec3ea9fba9b652b2460 357 Gene3D G3DSA:3.40.50.10740 41 194 1.1E-54 T 11-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal Patl_4176 9e2700e48e7ddec3ea9fba9b652b2460 357 SUPERFAMILY SSF52317 41 197 1.42E-49 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like Patl_4176 9e2700e48e7ddec3ea9fba9b652b2460 357 PIRSF PIRSF028757 42 356 9.3E-94 T 11-10-2018 IPR003507 Peptidase family S66 Patl_4176 9e2700e48e7ddec3ea9fba9b652b2460 357 SUPERFAMILY SSF141986 214 347 4.84E-45 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily Patl_4176 9e2700e48e7ddec3ea9fba9b652b2460 357 Pfam PF02016 LD-carboxypeptidase 54 342 1.7E-87 T 11-10-2018 IPR003507 Peptidase family S66 Patl_4176 9e2700e48e7ddec3ea9fba9b652b2460 357 Gene3D G3DSA:3.50.30.60 204 357 3.1E-49 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily Patl_2092 32fa9b9f0a4f516852b650188915372f 117 Gene3D G3DSA:2.60.40.420 23 117 1.9E-25 T 11-10-2018 IPR008972 Cupredoxin Patl_2092 32fa9b9f0a4f516852b650188915372f 117 Pfam PF13473 Cupredoxin-like domain 11 116 3.6E-30 T 11-10-2018 IPR028096 EfeO-type cupredoxin-like domain Patl_2092 32fa9b9f0a4f516852b650188915372f 117 SUPERFAMILY SSF49503 15 115 3.69E-17 T 11-10-2018 IPR008972 Cupredoxin Patl_2640 674c5688bbd84d1748262725d4020bb3 813 Gene3D G3DSA:2.60.120.430 65 247 1.4E-56 T 11-10-2018 Patl_2640 674c5688bbd84d1748262725d4020bb3 813 Gene3D G3DSA:3.20.20.80 249 810 3.0E-190 T 11-10-2018 Patl_2640 674c5688bbd84d1748262725d4020bb3 813 SUPERFAMILY SSF51445 469 799 4.8E-32 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily Patl_0623 8b206c51c0cdceb6d279ceea95430572 122 Pfam PF04219 Protein of unknown function, DUF 14 99 7.0E-30 T 11-10-2018 IPR007335 Protein of unknown function DUF413 Patl_1731 ab707121e7ba54e6a8ed36a02afec720 65 Pfam PF05532 CsbD-like 4 56 4.8E-18 T 11-10-2018 IPR008462 CsbD-like domain Patl_1731 ab707121e7ba54e6a8ed36a02afec720 65 Gene3D G3DSA:1.10.1470.10 1 64 4.2E-31 T 11-10-2018 IPR036629 YjbJ superfamily Patl_1731 ab707121e7ba54e6a8ed36a02afec720 65 PIRSF PIRSF039008 1 65 1.7E-31 T 11-10-2018 IPR026042 Stress response protein YjbJ Patl_1731 ab707121e7ba54e6a8ed36a02afec720 65 SUPERFAMILY SSF69047 1 64 9.55E-25 T 11-10-2018 IPR036629 YjbJ superfamily Patl_0085 13f8ed17de54fd0df25ce676aee4592d 284 Pfam PF12146 Serine aminopeptidase, S33 50 166 1.8E-13 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 Patl_0085 13f8ed17de54fd0df25ce676aee4592d 284 Gene3D G3DSA:3.40.50.1820 25 281 2.8E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0085 13f8ed17de54fd0df25ce676aee4592d 284 SUPERFAMILY SSF53474 53 281 1.85E-28 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3013 3c6ade83b3389d624c2476cfbb06eba7 109 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 33 106 3.7E-16 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 Patl_3013 3c6ade83b3389d624c2476cfbb06eba7 109 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 109 34.676 T 11-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 Patl_3013 3c6ade83b3389d624c2476cfbb06eba7 109 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 29 109 9.7E-16 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 Patl_3801 7c16bcdc5dc6f3fc6c11e86d397f9e3c 529 Pfam PF03929 PepSY-associated TM region 11 379 1.7E-57 T 11-10-2018 IPR005625 PepSY-associated TM protein Patl_3565 f6a411337f94c7e51a31c8b7542b85c3 491 Pfam PF02872 5'-nucleotidase, C-terminal domain 293 449 5.9E-41 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Patl_3565 f6a411337f94c7e51a31c8b7542b85c3 491 Gene3D G3DSA:3.90.780.10 294 491 5.2E-46 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Patl_3565 f6a411337f94c7e51a31c8b7542b85c3 491 PRINTS PR01607 Apyrase family signature 350 373 6.5E-6 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Patl_3565 f6a411337f94c7e51a31c8b7542b85c3 491 PRINTS PR01607 Apyrase family signature 423 442 6.5E-6 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Patl_3565 f6a411337f94c7e51a31c8b7542b85c3 491 SUPERFAMILY SSF56300 20 292 1.9E-31 T 11-10-2018 Patl_3565 f6a411337f94c7e51a31c8b7542b85c3 491 Gene3D G3DSA:3.60.21.10 15 292 4.8E-27 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like Patl_3565 f6a411337f94c7e51a31c8b7542b85c3 491 SUPERFAMILY SSF55816 290 489 1.31E-45 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Patl_3882 419e8a13b48026e3680d491c9e276dde 357 SUPERFAMILY SSF56935 22 357 2.35E-14 T 11-10-2018 Patl_3882 419e8a13b48026e3680d491c9e276dde 357 Pfam PF07396 Phosphate-selective porin O and P 28 357 1.9E-34 T 11-10-2018 IPR010870 Phosphate-selective porin O/P Patl_3882 419e8a13b48026e3680d491c9e276dde 357 Gene3D G3DSA:2.40.160.10 19 357 5.1E-53 T 11-10-2018 IPR023614 Porin domain superfamily Patl_3361 e5c131c9e5b2b2532648fc8f87fc9c03 202 SUPERFAMILY SSF49503 38 124 5.6E-13 T 11-10-2018 IPR008972 Cupredoxin Patl_3361 e5c131c9e5b2b2532648fc8f87fc9c03 202 Gene3D G3DSA:2.60.40.420 32 124 9.8E-9 T 11-10-2018 IPR008972 Cupredoxin Patl_1206 e1b7768eaefa738e37565e5b828af43c 251 Pfam PF02698 DUF218 domain 82 243 1.7E-18 T 11-10-2018 IPR003848 Domain of unknown function DUF218 Patl_3261 89a476176f582ae4e31ee8b1bdafa9bf 123 Pfam PF11528 Protein of unknown function (DUF3224) 3 121 1.1E-31 T 11-10-2018 IPR021607 Protein of unknown function DUF3224 Patl_3261 89a476176f582ae4e31ee8b1bdafa9bf 123 Gene3D G3DSA:2.40.350.10 2 123 1.6E-37 T 11-10-2018 IPR023159 SO1590-like superfamily Patl_3261 89a476176f582ae4e31ee8b1bdafa9bf 123 SUPERFAMILY SSF159238 3 123 3.92E-35 T 11-10-2018 IPR023159 SO1590-like superfamily Patl_0614 7bfce46e3a8b7febda3d72dae57e3f4e 128 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 5.0E-39 T 11-10-2018 IPR021284 Protein of unknown function DUF2750 Patl_0077 9f979656bb64d15cf5cedb9f7a611029 243 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 101 2.4E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_0077 9f979656bb64d15cf5cedb9f7a611029 243 PRINTS PR00111 Alpha/beta hydrolase fold signature 188 202 2.4E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_0077 9f979656bb64d15cf5cedb9f7a611029 243 PRINTS PR00111 Alpha/beta hydrolase fold signature 74 87 2.4E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_0077 9f979656bb64d15cf5cedb9f7a611029 243 Gene3D G3DSA:3.40.50.1820 15 243 1.8E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0077 9f979656bb64d15cf5cedb9f7a611029 243 Pfam PF12146 Serine aminopeptidase, S33 65 230 4.8E-13 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 Patl_0077 9f979656bb64d15cf5cedb9f7a611029 243 SUPERFAMILY SSF53474 17 240 1.76E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3404 642b75f4f0e1e827814fa1c0823a0c64 282 Pfam PF06629 MltA-interacting protein MipA 55 282 5.0E-37 T 11-10-2018 IPR010583 MltA-interacting MipA Patl_2751 7115c32d24029d8c077e9475440cbc65 138 Pfam PF03061 Thioesterase superfamily 50 122 1.6E-11 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Patl_2751 7115c32d24029d8c077e9475440cbc65 138 SUPERFAMILY SSF54637 8 134 1.83E-23 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_2751 7115c32d24029d8c077e9475440cbc65 138 Gene3D G3DSA:3.10.129.10 2 137 3.8E-37 T 11-10-2018 Patl_2347 e52a864230445d012f63923f38d24a97 134 SUPERFAMILY SSF159888 33 122 6.28E-8 T 11-10-2018 Patl_2621 d7de510abf50194f3100cde6571d1f78 293 Pfam PF03690 Uncharacterised protein family (UPF0160) 10 291 3.9E-79 T 11-10-2018 IPR003226 Metal-dependent protein hydrolase Patl_0629 3d925e8daec83e74bc95603f9beefbd2 398 Pfam PF03594 Benzoate membrane transport protein 7 382 8.5E-140 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 Patl_0629 3d925e8daec83e74bc95603f9beefbd2 398 TIGRFAM TIGR00843 benE: benzoate transporter 12 382 2.3E-120 T 11-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 Patl_1460 3e3995c728333b747bbd633d0f45b455 384 SUPERFAMILY SSF109604 119 348 3.37E-47 T 11-10-2018 Patl_1460 3e3995c728333b747bbd633d0f45b455 384 Pfam PF08668 HDOD domain 122 308 4.1E-34 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD Patl_1460 3e3995c728333b747bbd633d0f45b455 384 SMART SM00471 213 345 0.0022 T 11-10-2018 IPR003607 HD/PDEase domain Patl_1460 3e3995c728333b747bbd633d0f45b455 384 Gene3D G3DSA:1.10.3210.10 109 372 1.6E-42 T 11-10-2018 Patl_4270 a7f2e79c2edb50275562616708a7e34e 816 SUPERFAMILY SSF55486 370 596 6.68E-39 T 11-10-2018 Patl_4270 a7f2e79c2edb50275562616708a7e34e 816 Gene3D G3DSA:1.10.390.60 364 594 2.5E-29 T 11-10-2018 Patl_4270 a7f2e79c2edb50275562616708a7e34e 816 Pfam PF01433 Peptidase family M1 domain 369 590 1.2E-14 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Patl_4287 afbf140673fcfd8711c2e8fb6d8499f6 244 Pfam PF07277 SapC 7 232 6.3E-72 T 11-10-2018 IPR010836 SapC Patl_0703 e8325cec0750a4f38f19b204ff3d1b2f 149 Pfam PF10772 Protein of unknown function (DUF2597) 7 140 8.0E-61 T 11-10-2018 IPR019708 Bacteriophage HP1, Orf24 Patl_2071 3f807671243bc536b1c0657c3ebeb2d7 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 7 45 5.4E-13 T 11-10-2018 IPR008621 Cbb3-type cytochrome oxidase component Patl_1379 f65647488966fac088de01441ee3c656 622 Gene3D G3DSA:2.130.10.10 119 334 2.8E-8 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Patl_1379 f65647488966fac088de01441ee3c656 622 SUPERFAMILY SSF75011 175 620 7.98E-12 T 11-10-2018 Patl_3865 0c41f9d692f9edd6657c6e7e45babe85 136 SUPERFAMILY SSF58113 39 108 7.45E-5 T 11-10-2018 Patl_3865 0c41f9d692f9edd6657c6e7e45babe85 136 Gene3D G3DSA:1.20.120.20 18 132 1.1E-6 T 11-10-2018 Patl_4313 be9cfed37426db78e5f8e2b97a480a82 84 Pfam PF01809 Haemolytic domain 10 75 7.5E-29 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Patl_4313 be9cfed37426db78e5f8e2b97a480a82 84 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 3.0E-25 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Patl_4313 be9cfed37426db78e5f8e2b97a480a82 84 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.101 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Patl_4313 be9cfed37426db78e5f8e2b97a480a82 84 SMART SM01234 8 75 1.1E-40 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Patl_4313 be9cfed37426db78e5f8e2b97a480a82 84 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 13 83 1.9E-32 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Patl_0898 d341745cf2a0fb4700c32e779b92f115 353 Pfam PF05035 2-keto-3-deoxy-galactonokinase 13 346 7.0E-101 T 11-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 Patl_0898 d341745cf2a0fb4700c32e779b92f115 353 Gene3D G3DSA:3.30.420.300 3 82 3.6E-24 T 11-10-2018 Patl_0898 d341745cf2a0fb4700c32e779b92f115 353 Gene3D G3DSA:3.30.420.310 83 350 2.8E-70 T 11-10-2018 Patl_2187 02eb12c1db6339921b7c621bbe27ed29 502 SUPERFAMILY SSF103473 11 499 7.98E-38 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_2187 02eb12c1db6339921b7c621bbe27ed29 502 Pfam PF07690 Major Facilitator Superfamily 17 461 1.7E-19 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_2619 45eee25d1534a49f9979597a5b500e21 201 Gene3D G3DSA:3.40.50.720 1 200 2.3E-31 T 11-10-2018 Patl_2619 45eee25d1534a49f9979597a5b500e21 201 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 37 159 2.5E-11 T 11-10-2018 Patl_2619 45eee25d1534a49f9979597a5b500e21 201 SUPERFAMILY SSF51735 2 200 1.69E-23 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily Patl_0216 b29f661530946c2e2859327835e206b4 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 6.1E-22 T 11-10-2018 IPR019201 Protein of unknown function DUF2065 Patl_2713 3a4a1c84e97ca55f94a1eafac6507bdc 386 Gene3D G3DSA:3.30.1540.10 222 311 1.1E-99 T 11-10-2018 Patl_2713 3a4a1c84e97ca55f94a1eafac6507bdc 386 Gene3D G3DSA:3.40.50.10540 3 330 1.1E-99 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily Patl_2713 3a4a1c84e97ca55f94a1eafac6507bdc 386 SUPERFAMILY SSF89796 3 384 1.96E-104 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily Patl_2713 3a4a1c84e97ca55f94a1eafac6507bdc 386 Pfam PF02515 CoA-transferase family III 3 362 3.1E-95 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 Patl_2576 c43c24d9c6f84eb18eb8626cdb4e8b15 189 Pfam PF03358 NADPH-dependent FMN reductase 4 156 1.3E-33 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Patl_2576 c43c24d9c6f84eb18eb8626cdb4e8b15 189 Gene3D G3DSA:3.40.50.360 1 188 8.1E-43 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_2576 c43c24d9c6f84eb18eb8626cdb4e8b15 189 SUPERFAMILY SSF52218 4 183 3.19E-42 T 11-10-2018 IPR029039 Flavoprotein-like superfamily Patl_1160 255c03cd4a91a3bbd8127bdbfc9fee90 188 Pfam PF00156 Phosphoribosyl transferase domain 20 151 3.1E-12 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Patl_1160 255c03cd4a91a3bbd8127bdbfc9fee90 188 Gene3D G3DSA:3.40.50.2020 1 186 8.3E-33 T 11-10-2018 Patl_1160 255c03cd4a91a3bbd8127bdbfc9fee90 188 SUPERFAMILY SSF53271 5 164 1.75E-26 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like Patl_2432 f3fdc8bc78e1001552d737813be08f88 125 SUPERFAMILY SSF54593 2 121 3.1E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2432 f3fdc8bc78e1001552d737813be08f88 125 Gene3D G3DSA:3.10.180.10 1 124 4.0E-32 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_2432 f3fdc8bc78e1001552d737813be08f88 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 119 6.4E-6 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Patl_4066 bee190d02ea12b93966563f663df1b90 153 Pfam PF12680 SnoaL-like domain 43 144 1.3E-8 T 11-10-2018 IPR037401 SnoaL-like domain Patl_4066 bee190d02ea12b93966563f663df1b90 153 SUPERFAMILY SSF54427 35 148 5.32E-18 T 11-10-2018 IPR032710 NTF2-like domain superfamily Patl_4066 bee190d02ea12b93966563f663df1b90 153 Gene3D G3DSA:3.10.450.50 35 152 3.6E-19 T 11-10-2018 Patl_0293 e9039197e202b4a0e13960a2ee04c41c 637 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 1 475 9.5E-190 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Patl_0293 e9039197e202b4a0e13960a2ee04c41c 637 ProSitePatterns PS01303 BCCT family of transporters signature. 294 303 - T 11-10-2018 IPR018093 BCCT transporter, conserved site Patl_0293 e9039197e202b4a0e13960a2ee04c41c 637 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 32 476 3.2E-160 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Patl_2258 0e4de6dad33e308fed8de6155adfa6a1 708 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 154 4.0E-11 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_2258 0e4de6dad33e308fed8de6155adfa6a1 708 Pfam PF00593 TonB dependent receptor 192 706 2.5E-41 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_2258 0e4de6dad33e308fed8de6155adfa6a1 708 SUPERFAMILY SSF56935 28 708 1.22E-89 T 11-10-2018 Patl_2258 0e4de6dad33e308fed8de6155adfa6a1 708 Gene3D G3DSA:2.40.170.20 181 708 2.6E-62 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_2258 0e4de6dad33e308fed8de6155adfa6a1 708 Gene3D G3DSA:2.170.130.10 31 158 3.6E-19 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily Patl_3219 84c3b5b40e1bd5ec3a40a7d013c518fa 329 SUPERFAMILY SSF52540 3 199 1.06E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_3219 84c3b5b40e1bd5ec3a40a7d013c518fa 329 Gene3D G3DSA:3.40.50.300 2 191 6.3E-7 T 11-10-2018 Patl_2742 8cb91b3c38e727e426679a24837ef49e 189 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 51 136 3.5E-6 T 11-10-2018 IPR015032 MTH538 TIR-like domain Patl_2742 8cb91b3c38e727e426679a24837ef49e 189 Gene3D G3DSA:3.40.50.11200 1 189 5.7E-75 T 11-10-2018 Patl_0161 a0c8ec5576651a0bdf8423e6aede85f5 221 SUPERFAMILY SSF46689 12 85 6.67E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Patl_0161 a0c8ec5576651a0bdf8423e6aede85f5 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 1.3E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_0161 a0c8ec5576651a0bdf8423e6aede85f5 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 1.3E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_0161 a0c8ec5576651a0bdf8423e6aede85f5 221 Gene3D G3DSA:1.10.357.10 7 192 1.2E-23 T 11-10-2018 Patl_0161 a0c8ec5576651a0bdf8423e6aede85f5 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 66 2.1E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Patl_3928 410c119230cbde227856ab98a9b8315b 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 2.9E-8 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Patl_3928 410c119230cbde227856ab98a9b8315b 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 2.9E-8 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Patl_3928 410c119230cbde227856ab98a9b8315b 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 2.9E-8 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Patl_3928 410c119230cbde227856ab98a9b8315b 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 2.9E-8 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Patl_3928 410c119230cbde227856ab98a9b8315b 256 Pfam PF01061 ABC-2 type transporter 9 218 1.2E-37 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Patl_3928 410c119230cbde227856ab98a9b8315b 256 PIRSF PIRSF006648 4 253 7.2E-24 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Patl_2554 e312241c8496d64a7eed915447aeaab1 287 Gene3D G3DSA:3.40.50.300 51 280 7.8E-63 T 11-10-2018 Patl_2554 e312241c8496d64a7eed915447aeaab1 287 SUPERFAMILY SSF52540 52 274 1.19E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2554 e312241c8496d64a7eed915447aeaab1 287 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 54 235 2.3E-50 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Patl_2554 e312241c8496d64a7eed915447aeaab1 287 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 50 267 29.625 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 Patl_2554 e312241c8496d64a7eed915447aeaab1 287 Pfam PF13500 AAA domain 52 267 4.8E-32 T 11-10-2018 Patl_1386 a6e73af9526f2203a51edec46baec609 112 SMART SM00530 9 63 2.7E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_1386 a6e73af9526f2203a51edec46baec609 112 Pfam PF01381 Helix-turn-helix 10 61 5.6E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Patl_1386 a6e73af9526f2203a51edec46baec609 112 Gene3D G3DSA:1.10.260.40 4 68 3.1E-12 T 11-10-2018 Patl_1386 a6e73af9526f2203a51edec46baec609 112 SUPERFAMILY SSF47413 7 71 7.24E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Patl_1999 3b880b0a4a26abc928536856bbc4c2d6 455 Pfam PF07044 Protein of unknown function (DUF1329) 84 450 2.3E-155 T 11-10-2018 IPR010752 Protein of unknown function DUF1329 Patl_2990 cd08f1afbd85591e001efbee4bf9d701 254 Pfam PF11932 Protein of unknown function (DUF3450) 11 250 3.0E-91 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 Patl_2990 cd08f1afbd85591e001efbee4bf9d701 254 PIRSF PIRSF028069 5 254 8.6E-89 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 Patl_3354 0857b7075bd1580c55453b5da2c16438 106 Pfam PF06945 Protein of unknown function (DUF1289) 35 81 2.9E-16 T 11-10-2018 IPR010710 Protein of unknown function DUF1289 Patl_1684 6155af011cf1018a0fb3e17f29e28a33 91 Pfam PF13616 PPIC-type PPIASE domain 12 87 2.7E-20 T 11-10-2018 Patl_1684 6155af011cf1018a0fb3e17f29e28a33 91 Gene3D G3DSA:3.10.50.40 1 90 2.9E-34 T 11-10-2018 Patl_1684 6155af011cf1018a0fb3e17f29e28a33 91 SUPERFAMILY SSF54534 5 86 7.85E-27 T 11-10-2018 Patl_0841 a767978ea2d48a5bc6297ea96f4bbe24 100 Gene3D G3DSA:2.60.120.260 3 97 2.1E-8 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily Patl_0010 a2c10c407e2c89ed1549f0ed752371c9 190 Pfam PF03352 Methyladenine glycosylase 8 183 4.1E-79 T 11-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 Patl_0010 a2c10c407e2c89ed1549f0ed752371c9 190 Gene3D G3DSA:1.10.340.30 4 189 1.6E-84 T 11-10-2018 Patl_0010 a2c10c407e2c89ed1549f0ed752371c9 190 SUPERFAMILY SSF48150 4 184 1.1E-77 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Patl_0010 a2c10c407e2c89ed1549f0ed752371c9 190 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 5 184 1.8E-80 T 11-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 Patl_0284 ba92e6b2e0168f2946cbf6765a0b17d5 471 Gene3D G3DSA:1.20.1600.10 14 452 2.5E-39 T 11-10-2018 Patl_0284 ba92e6b2e0168f2946cbf6765a0b17d5 471 Pfam PF02321 Outer membrane efflux protein 278 441 1.5E-11 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Patl_0284 ba92e6b2e0168f2946cbf6765a0b17d5 471 Pfam PF02321 Outer membrane efflux protein 23 243 3.9E-8 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Patl_0284 ba92e6b2e0168f2946cbf6765a0b17d5 471 SUPERFAMILY SSF56954 4 450 1.96E-37 T 11-10-2018 Patl_1190 e272f87aef648039221df4b89fcec5f0 490 Pfam PF13440 Polysaccharide biosynthesis protein 32 320 9.0E-56 T 11-10-2018 Patl_0798 03329dc81c90a445767cb287f339c03b 276 Pfam PF04909 Amidohydrolase 3 276 2.9E-37 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Patl_0798 03329dc81c90a445767cb287f339c03b 276 SUPERFAMILY SSF51556 3 276 5.97E-71 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_0798 03329dc81c90a445767cb287f339c03b 276 Gene3D G3DSA:3.20.20.140 1 276 1.6E-86 T 11-10-2018 Patl_0883 e4f07f52b055c223d6586d18c8d24db1 87 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 14 78 2.0E-33 T 11-10-2018 Patl_0883 e4f07f52b055c223d6586d18c8d24db1 87 Pfam PF14145 YrhK-like protein 21 74 1.5E-17 T 11-10-2018 IPR025424 YrhK domain Patl_3409 d39426a50bc2913fa6693e680e5b9210 399 SUPERFAMILY SSF53649 33 372 4.4E-22 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Patl_0575 48f4d65cbd299c87e0e4763ea9175f52 432 Pfam PF12094 Protein of unknown function (DUF3570) 12 432 8.8E-159 T 11-10-2018 IPR021953 Protein of unknown function DUF3570 Patl_2839 61b2072dbec5ef8e58a74ff351738a6b 91 Pfam PF13670 Peptidase propeptide and YPEB domain 12 86 2.5E-9 T 11-10-2018 IPR025711 PepSY domain Patl_1088 7f89bd504440bb2c0dcba65d7e045391 275 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 86 257 3.4E-29 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Patl_1088 7f89bd504440bb2c0dcba65d7e045391 275 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 90 257 6.7E-49 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Patl_3480 348587bcdb4acc085d57adbbc4b3d877 288 Gene3D G3DSA:1.20.1080.10 1 249 7.8E-68 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Patl_3480 348587bcdb4acc085d57adbbc4b3d877 288 Pfam PF01226 Formate/nitrite transporter 9 257 5.0E-65 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 Patl_1849 e8dd8c93bd260db4cfc34c15a510b8ee 150 SUPERFAMILY SSF53098 18 127 1.74E-11 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily Patl_4056 844eff2f9b86a25f29b1024b7e0db01e 298 SUPERFAMILY SSF69593 24 286 1.83E-29 T 11-10-2018 Patl_4056 844eff2f9b86a25f29b1024b7e0db01e 298 Pfam PF01553 Acyltransferase 79 230 2.7E-11 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Patl_4056 844eff2f9b86a25f29b1024b7e0db01e 298 SMART SM00563 89 231 2.6E-14 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Patl_2099 8610bc56e52336632dd6af08c825113a 101 Gene3D G3DSA:1.10.1660.10 2 101 1.1E-24 T 11-10-2018 Patl_2099 8610bc56e52336632dd6af08c825113a 101 Pfam PF13591 MerR HTH family regulatory protein 9 93 5.8E-26 T 11-10-2018 Patl_2766 fa6b790d7ca167f2e483f00f3bc950a2 312 Pfam PF00561 alpha/beta hydrolase fold 32 187 4.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Patl_2766 fa6b790d7ca167f2e483f00f3bc950a2 312 SUPERFAMILY SSF53474 11 278 5.19E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_2766 fa6b790d7ca167f2e483f00f3bc950a2 312 Gene3D G3DSA:3.40.50.1820 3 290 6.8E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0984 e9539cfe39eef2eef8bc02bdac985720 358 SUPERFAMILY SSF117281 46 357 6.41E-31 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Patl_0984 e9539cfe39eef2eef8bc02bdac985720 358 Gene3D G3DSA:2.120.10.80 53 358 7.0E-25 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 Patl_3258 760ff6f9b9b6ea9e56edf1ac3fe35741 110 SUPERFAMILY SSF160544 13 90 8.63E-19 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Patl_3258 760ff6f9b9b6ea9e56edf1ac3fe35741 110 Gene3D G3DSA:3.40.1690.10 12 95 3.0E-21 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Patl_3258 760ff6f9b9b6ea9e56edf1ac3fe35741 110 Pfam PF01312 FlhB HrpN YscU SpaS Family 14 87 5.9E-16 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Patl_3689 3b28c22783e490b789fa3c4f435c6a5a 430 SUPERFAMILY SSF53474 61 346 1.01E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_3689 3b28c22783e490b789fa3c4f435c6a5a 430 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 41 160 3.6E-11 T 11-10-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 Patl_0868 4923396b6ba0450abc0958125302ab4c 136 Pfam PF07681 DoxX 10 87 3.2E-11 T 11-10-2018 IPR032808 DoxX family Patl_0517 6dae6a360f1085489b7986a560e1d442 298 Pfam PF03186 CobD/Cbib protein 2 271 6.2E-32 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Patl_0335 1ec784171cf417445a092a187a57809c 526 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 32 438 2.6E-66 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_0335 1ec784171cf417445a092a187a57809c 526 Gene3D G3DSA:1.20.1730.10 21 525 5.6E-108 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily Patl_0335 1ec784171cf417445a092a187a57809c 526 Pfam PF00474 Sodium:solute symporter family 32 426 2.3E-42 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Patl_4272 f7c78e128ee94ae13ae1d53176764d06 374 Pfam PF01594 AI-2E family transporter 19 359 1.6E-48 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like Patl_4020 2f12750c725b5cc8685bc553ebc0803c 210 Pfam PF01553 Acyltransferase 43 153 6.7E-13 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Patl_4020 2f12750c725b5cc8685bc553ebc0803c 210 SUPERFAMILY SSF69593 24 193 3.92E-21 T 11-10-2018 Patl_4020 2f12750c725b5cc8685bc553ebc0803c 210 SMART SM00563 48 160 1.2E-19 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Patl_2747 5292fd539c709c697a11d93f232a7168 275 Pfam PF11185 Protein of unknown function (DUF2971) 123 212 6.8E-12 T 11-10-2018 IPR021352 Protein of unknown function DUF2971 Patl_1091 bf3ecfb304a8bfbb6f1e7aaeafd926a5 429 Pfam PF04932 O-Antigen ligase 203 345 5.7E-6 T 11-10-2018 IPR007016 O-antigen ligase-related Patl_4045 e0aea956b2b016969229a0cea79d994b 97 Gene3D G3DSA:1.10.1200.10 2 95 2.4E-17 T 11-10-2018 IPR036736 ACP-like superfamily Patl_4044 968ea16a2524c93e1b43980068395863 219 Pfam PF04012 PspA/IM30 family 2 216 4.6E-41 T 11-10-2018 IPR007157 PspA/IM30 Patl_4044 968ea16a2524c93e1b43980068395863 219 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 1.1E-76 T 11-10-2018 IPR014319 Phage shock protein, PspA Patl_1423 f91a460254006a4040cdcc8aa0ffc54f 393 Pfam PF07690 Major Facilitator Superfamily 16 352 3.8E-36 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Patl_1423 f91a460254006a4040cdcc8aa0ffc54f 393 SUPERFAMILY SSF103473 6 388 3.53E-54 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_1423 f91a460254006a4040cdcc8aa0ffc54f 393 Gene3D G3DSA:1.20.1250.20 6 387 2.6E-48 T 11-10-2018 Patl_2408 276bca6ba241d09024f4274b52a3e1ec 417 Pfam PF12704 MacB-like periplasmic core domain 109 261 1.0E-8 T 11-10-2018 IPR025857 MacB-like periplasmic core domain Patl_2408 276bca6ba241d09024f4274b52a3e1ec 417 Pfam PF02687 FtsX-like permease family 323 393 2.5E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Patl_0156 07fc5cfe46956a0e40549273855e2993 150 SUPERFAMILY SSF46626 17 117 6.94E-8 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_0156 07fc5cfe46956a0e40549273855e2993 150 Gene3D G3DSA:1.10.760.10 20 135 5.0E-5 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Patl_3324 84f2e1484b1012090b3412804bb0ad1d 86 Pfam PF14110 Domain of unknown function (DUF4282) 5 78 1.6E-13 T 11-10-2018 IPR025557 Protein of unknown function DUF4282 Patl_3607 7d5d195d2aead2cae9104b96cf0a5f87 76 Pfam PF06150 ChaB 9 74 2.0E-25 T 11-10-2018 IPR009317 ChaB Patl_3607 7d5d195d2aead2cae9104b96cf0a5f87 76 SUPERFAMILY SSF140376 2 74 9.81E-29 T 11-10-2018 IPR037205 ChaB superfamily Patl_3607 7d5d195d2aead2cae9104b96cf0a5f87 76 Gene3D G3DSA:1.10.1740.70 2 76 1.7E-31 T 11-10-2018 Patl_4143 c2bb470086daea00f7e4b65eea19bf99 377 SUPERFAMILY SSF103473 14 376 1.19E-16 T 11-10-2018 IPR036259 MFS transporter superfamily Patl_4143 c2bb470086daea00f7e4b65eea19bf99 377 Gene3D G3DSA:1.20.1250.20 61 377 4.3E-9 T 11-10-2018 Patl_1195 0b8c566e6e835d67a664e239f6412c81 355 Gene3D G3DSA:3.40.630.30 136 293 1.2E-23 T 11-10-2018 Patl_1195 0b8c566e6e835d67a664e239f6412c81 355 Pfam PF13480 Acetyltransferase (GNAT) domain 148 287 2.3E-15 T 11-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 Patl_1195 0b8c566e6e835d67a664e239f6412c81 355 SUPERFAMILY SSF55729 143 299 4.0E-36 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase Patl_2535 8b76f38bf609ca42304a323ed19ef952 293 Pfam PF01963 TraB family 31 291 6.6E-71 T 11-10-2018 IPR002816 Pheromone shutdown, TraB Patl_0437 e84b5f2bf0e3377b8fd1108cce75ce6e 113 Gene3D G3DSA:1.10.3730.20 5 113 1.4E-34 T 11-10-2018 Patl_0437 e84b5f2bf0e3377b8fd1108cce75ce6e 113 SUPERFAMILY SSF103481 8 109 6.15E-20 T 11-10-2018 Patl_0437 e84b5f2bf0e3377b8fd1108cce75ce6e 113 Pfam PF00893 Small Multidrug Resistance protein 7 97 4.8E-26 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 Patl_3740 c3c466ae596f1b5331544eab46b74e8d 321 Pfam PF13349 Putative adhesin 55 318 4.8E-14 T 11-10-2018 IPR025164 Putative adhesin Patl_3559 6f38e86515bcb694ab324e8bbd153e11 168 Pfam PF06271 RDD family 9 148 3.3E-19 T 11-10-2018 IPR010432 RDD Patl_0426 dd31cd524f99ab41439f0eade033c963 155 Gene3D G3DSA:3.10.129.10 6 148 4.1E-42 T 11-10-2018 Patl_0426 dd31cd524f99ab41439f0eade033c963 155 SUPERFAMILY SSF54637 13 149 2.75E-33 T 11-10-2018 IPR029069 HotDog domain superfamily Patl_0426 dd31cd524f99ab41439f0eade033c963 155 Pfam PF03061 Thioesterase superfamily 33 114 1.6E-9 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Patl_2033 326e968f0f131c724ea5e3ab4c0df4dd 108 SUPERFAMILY SSF109604 7 88 7.14E-23 T 11-10-2018 Patl_2033 326e968f0f131c724ea5e3ab4c0df4dd 108 Gene3D G3DSA:1.10.3210.10 3 98 2.1E-35 T 11-10-2018 Patl_2033 326e968f0f131c724ea5e3ab4c0df4dd 108 Pfam PF13023 HD domain 14 85 4.2E-10 T 11-10-2018 IPR006674 HD domain Patl_0388 ccc09cf4a3006043d77e79bada2de182 235 Pfam PF07386 Protein of unknown function (DUF1499) 96 230 1.4E-28 T 11-10-2018 IPR010865 Protein of unknown function DUF1499 Patl_0806 bdde19f38130cb00c5ffb6ab3cf909cd 222 Gene3D G3DSA:2.60.120.430 55 222 6.1E-16 T 11-10-2018 Patl_2350 98731ccad4cae99e01853b7d9aaf4eb4 368 Pfam PF11199 Protein of unknown function (DUF2891) 36 360 8.0E-139 T 11-10-2018 IPR021365 Protein of unknown function DUF2891 Patl_3855 de5d225b87ae185126e9c80300e895d7 587 TIGRFAM TIGR03545 TIGR03545: TIGR03545 family protein 4 540 1.6E-192 T 11-10-2018 IPR019934 Conserved hypothetical protein CHP03545 Patl_3911 9afa8e17726f3ee18b91701e62d995e1 239 Pfam PF08223 PaaX-like protein C-terminal domain 146 233 4.2E-11 T 11-10-2018 IPR013225 PaaX-like, C-terminal Patl_1089 a2a4ed10b67bbbd19bb4001722a3ad33 363 SUPERFAMILY SSF53756 5 361 1.65E-62 T 11-10-2018 Patl_1089 a2a4ed10b67bbbd19bb4001722a3ad33 363 Gene3D G3DSA:3.40.50.2000 17 174 3.0E-59 T 11-10-2018 Patl_1089 a2a4ed10b67bbbd19bb4001722a3ad33 363 Pfam PF13439 Glycosyltransferase Family 4 17 175 6.6E-14 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Patl_1089 a2a4ed10b67bbbd19bb4001722a3ad33 363 Pfam PF00534 Glycosyl transferases group 1 187 332 4.7E-36 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 Patl_1089 a2a4ed10b67bbbd19bb4001722a3ad33 363 Gene3D G3DSA:3.40.50.2000 175 333 3.0E-59 T 11-10-2018 Patl_3054 9dd11646670bd68a09f19d0be9009608 265 SUPERFAMILY SSF52540 37 197 6.13E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_1489 eb338702cc61d7d0836138f28214d225 373 Gene3D G3DSA:1.10.3470.10 29 370 6.0E-97 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Patl_1489 eb338702cc61d7d0836138f28214d225 373 Pfam PF01032 FecCD transport family 42 365 6.2E-96 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Patl_1489 eb338702cc61d7d0836138f28214d225 373 SUPERFAMILY SSF81345 25 365 1.01E-79 T 11-10-2018 IPR037294 ABC transporter, BtuC-like Patl_4308 30d56ff66f826b630ccc3fe1941f4f47 224 Gene3D G3DSA:1.10.8.1180 110 181 3.7E-12 T 11-10-2018 Patl_3041 2336c53f0fd5cd2867fc1205b770fb94 175 Pfam PF03748 Flagellar basal body-associated protein FliL 74 175 2.3E-19 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Patl_2222 d4ed0bafff2cd9c48d18709263d49677 537 Pfam PF00962 Adenosine/AMP deaminase 202 492 9.3E-40 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 Patl_2222 d4ed0bafff2cd9c48d18709263d49677 537 SUPERFAMILY SSF51556 30 503 9.46E-65 T 11-10-2018 IPR032466 Metal-dependent hydrolase Patl_3468 5b7185f4543d24e0a113e6fef536240c 373 Gene3D G3DSA:3.40.1610.10 2 229 4.7E-53 T 11-10-2018 IPR027479 Protein of unknown function DUF917, N-terminal Patl_3468 5b7185f4543d24e0a113e6fef536240c 373 Pfam PF06032 Protein of unknown function (DUF917) 8 362 5.9E-92 T 11-10-2018 IPR010318 Protein of unknown function DUF917 Patl_3468 5b7185f4543d24e0a113e6fef536240c 373 SUPERFAMILY SSF160991 1 361 2.09E-87 T 11-10-2018 Patl_3195 6ba379bb930f0ddf896f87f0490aeb60 124 Pfam PF11399 Protein of unknown function (DUF3192) 20 119 6.7E-42 T 11-10-2018 IPR021534 Protein of unknown function DUF3192 Patl_2507 f5d261433c5a9fe5daed92db69941497 349 SUPERFAMILY SSF52151 31 327 1.36E-13 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Patl_0609 97175af14b1856f94ba85b6c3437ed07 56 Pfam PF12065 Protein of unknown function (DUF3545) 1 49 9.1E-17 T 11-10-2018 IPR021932 Protein of unknown function DUF3545 Patl_0542 13c6253d3cb66b16bfc52aeb0034617d 173 Pfam PF11157 Protein of unknown function (DUF2937) 5 161 3.5E-59 T 11-10-2018 IPR022584 Protein of unknown function DUF2937 Patl_0542 13c6253d3cb66b16bfc52aeb0034617d 173 PIRSF PIRSF029393 1 173 1.2E-52 T 11-10-2018 IPR016917 Uncharacterised conserved protein UCP029393 Patl_2950 d7f99073c96bca76a224c030674e4a78 397 Pfam PF12698 ABC-2 family transporter protein 17 382 7.4E-32 T 11-10-2018 Patl_4184 658b3e00c1b09bb917ac6d0ac6ed34d0 361 Pfam PF11017 Protein of unknown function (DUF2855) 37 351 1.0E-103 T 11-10-2018 IPR021276 Protein of unknown function DUF2855 Patl_1429 1d82e9070346c484a48108492eb768dc 576 Pfam PF11949 Protein of unknown function (DUF3466) 33 565 4.1E-99 T 11-10-2018 IPR022562 Protein of unknown function DUF3466 Patl_2264 f51158c6e5e76ddb50063d616a152c43 621 SUPERFAMILY SSF48452 500 607 2.15E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Patl_0300 1e3685f0e8d1f248702fb003a2d1e6c7 233 Pfam PF08856 Protein of unknown function (DUF1826) 31 230 8.1E-68 T 11-10-2018 IPR014955 Protein of unknown function DUF1826 Patl_1958 6abfdb827738bedda59b38c430d05156 206 Pfam PF08695 Cytochrome oxidase complex assembly protein 1 95 197 2.9E-12 T 11-10-2018 IPR014807 Cytochrome oxidase assembly protein 1 Patl_2909 68695bd51e4a6dfa41785a9f3786f82f 372 Pfam PF01594 AI-2E family transporter 11 325 1.3E-59 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like Patl_2709 526690e77ebd9424abc54bb85c5f12bd 116 SUPERFAMILY SSF141488 40 114 1.83E-15 T 11-10-2018 IPR036328 C-type lysozyme inhibitor superfamily Patl_2709 526690e77ebd9424abc54bb85c5f12bd 116 Gene3D G3DSA:2.40.128.200 40 116 2.5E-13 T 11-10-2018 IPR036328 C-type lysozyme inhibitor superfamily Patl_2709 526690e77ebd9424abc54bb85c5f12bd 116 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 46 107 3.7E-12 T 11-10-2018 IPR018660 C-type lysozyme inhibitor Patl_2300 193a3c03521cd27ef32b94d387a38fc6 147 Pfam PF07813 LTXXQ motif family protein 35 130 1.9E-9 T 11-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 Patl_2300 193a3c03521cd27ef32b94d387a38fc6 147 PIRSF PIRSF034445 4 142 6.3E-17 T 11-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 Patl_2300 193a3c03521cd27ef32b94d387a38fc6 147 Gene3D G3DSA:1.20.120.1490 35 145 4.4E-16 T 11-10-2018 Patl_3022 0f245af64869415f02f092af11faf675 134 Pfam PF10975 Protein of unknown function (DUF2802) 66 133 5.8E-25 T 11-10-2018 IPR021244 Protein of unknown function DUF2802 Patl_0414 6c19357a57e8f2a3aad9d69a25cde227 783 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 157 2.0E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain Patl_0414 6c19357a57e8f2a3aad9d69a25cde227 783 Gene3D G3DSA:2.40.170.20 43 782 8.6E-125 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily Patl_0414 6c19357a57e8f2a3aad9d69a25cde227 783 Pfam PF00593 TonB dependent receptor 266 778 8.8E-33 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel Patl_0414 6c19357a57e8f2a3aad9d69a25cde227 783 SUPERFAMILY SSF56935 35 781 4.48E-114 T 11-10-2018 Patl_2519 6b6dfd50d00c820f6c1e4bc8c2bc9f95 389 Pfam PF06224 Winged helix DNA-binding domain 37 374 2.1E-82 T 11-10-2018 IPR009351 Protein of unknown function DUF1006 Patl_0434 7125247ad100b6374a0286e30c0532e4 197 Pfam PF05728 Uncharacterised protein family (UPF0227) 10 194 3.9E-54 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA Patl_0434 7125247ad100b6374a0286e30c0532e4 197 Gene3D G3DSA:3.40.50.1820 7 196 1.1E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0434 7125247ad100b6374a0286e30c0532e4 197 SUPERFAMILY SSF53474 6 194 9.1E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold Patl_0386 f582d6d2fec83a42408aa5c2fbc4015e 186 SUPERFAMILY SSF56925 28 159 8.24E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel Patl_0386 f582d6d2fec83a42408aa5c2fbc4015e 186 Pfam PF13505 Outer membrane protein beta-barrel domain 6 159 8.3E-16 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel Patl_0386 f582d6d2fec83a42408aa5c2fbc4015e 186 Gene3D G3DSA:2.40.160.10 18 186 5.1E-9 T 11-10-2018 IPR023614 Porin domain superfamily Patl_4301 ac48624051519a09098594824687463c 270 SUPERFAMILY SSF81336 85 264 5.23E-44 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4301 ac48624051519a09098594824687463c 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 206 215 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4301 ac48624051519a09098594824687463c 270 Pfam PF00119 ATP synthase A chain 36 264 4.0E-57 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4301 ac48624051519a09098594824687463c 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 27 264 7.5E-44 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4301 ac48624051519a09098594824687463c 270 Gene3D G3DSA:1.20.120.220 84 270 4.2E-54 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_4301 ac48624051519a09098594824687463c 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 270 15.801 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Patl_2847 f71d3e91561d274520be8eeb078be00b 165 Pfam PF10003 Integral membrane protein (DUF2244) 15 152 2.6E-34 T 11-10-2018 IPR019253 Protein of unknown function DUF2244, transmembrane Patl_4005 5a852f31f3a5461226ea897440ed666b 206 Pfam PF02397 Bacterial sugar transferase 3 178 1.1E-64 T 11-10-2018 IPR003362 Bacterial sugar transferase Patl_2763 8118ef820eb50d3332ba24f5c0f729ea 399 Pfam PF02515 CoA-transferase family III 14 368 7.2E-112 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 Patl_2763 8118ef820eb50d3332ba24f5c0f729ea 399 SUPERFAMILY SSF89796 11 397 2.22E-115 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily Patl_2763 8118ef820eb50d3332ba24f5c0f729ea 399 Gene3D G3DSA:3.30.1540.10 230 327 7.9E-112 T 11-10-2018 Patl_2763 8118ef820eb50d3332ba24f5c0f729ea 399 Gene3D G3DSA:3.40.50.10540 13 391 7.9E-112 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily Patl_2107 51b587ce7fb57d5cbe864270537ef072 159 Pfam PF04143 Sulphur transport 9 146 6.7E-8 T 11-10-2018 IPR007272 Sulphur transport domain Patl_2791 1107a536a19545c171eefc12bb26dd4c 372 Pfam PF13795 HupE / UreJ protein 184 345 2.4E-46 T 11-10-2018 IPR032809 Putative HupE/UreJ protein Patl_3440 1a3afd6b02185ace1a18854f3d2e2da3 280 Pfam PF10977 Protein of unknown function (DUF2797) 39 273 2.9E-90 T 11-10-2018 IPR021246 Protein of unknown function DUF2797 Patl_2603 7fa681e61375cbbac95251572ba9e662 206 Gene3D G3DSA:1.10.1130.10 26 176 1.2E-5 T 11-10-2018 Patl_2603 7fa681e61375cbbac95251572ba9e662 206 SUPERFAMILY SSF48695 56 108 1.28E-6 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily Patl_3781 eca8a95697b44531e98262d71b15f1b5 201 Pfam PF13453 Transcription factor zinc-finger 104 146 2.0E-12 T 11-10-2018 IPR027392 Transcription factor zinc-finger Patl_3781 eca8a95697b44531e98262d71b15f1b5 201 Pfam PF13453 Transcription factor zinc-finger 38 74 3.4E-8 T 11-10-2018 IPR027392 Transcription factor zinc-finger Patl_0144 66d2c5ff7fc634c46b5128185f153dd4 235 SMART SM00702 6 224 3.2E-4 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 Patl_0144 66d2c5ff7fc634c46b5128185f153dd4 235 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 134 223 8.0E-11 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 Patl_1645 524560b4caddee89d47ff3a6dfdd63b9 932 Pfam PF03993 Domain of Unknown Function (DUF349) 567 639 1.5E-16 T 11-10-2018 IPR007139 Protein of unknown function DUF349 Patl_1645 524560b4caddee89d47ff3a6dfdd63b9 932 Pfam PF03993 Domain of Unknown Function (DUF349) 714 768 1.3E-5 T 11-10-2018 IPR007139 Protein of unknown function DUF349 Patl_1645 524560b4caddee89d47ff3a6dfdd63b9 932 Pfam PF03993 Domain of Unknown Function (DUF349) 646 710 5.1E-8 T 11-10-2018 IPR007139 Protein of unknown function DUF349 Patl_1293 57c247fa7d4097086e5aa1c315789f22 105 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 17 90 7.6E-16 T 11-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 Patl_1293 57c247fa7d4097086e5aa1c315789f22 105 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 10 105 1.7E-32 T 11-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 Patl_2171 4b6de2fee9c60328891cc042bfa8880e 139 SUPERFAMILY SSF54631 1 127 7.07E-30 T 11-10-2018 Patl_2171 4b6de2fee9c60328891cc042bfa8880e 139 SMART SM00116 13 61 0.07 T 11-10-2018 IPR000644 CBS domain Patl_2171 4b6de2fee9c60328891cc042bfa8880e 139 SMART SM00116 80 128 1.5 T 11-10-2018 IPR000644 CBS domain Patl_2171 4b6de2fee9c60328891cc042bfa8880e 139 Gene3D G3DSA:3.10.580.10 1 128 3.9E-27 T 11-10-2018 Patl_2171 4b6de2fee9c60328891cc042bfa8880e 139 Pfam PF00571 CBS domain 6 57 3.5E-8 T 11-10-2018 IPR000644 CBS domain Patl_2171 4b6de2fee9c60328891cc042bfa8880e 139 Pfam PF00571 CBS domain 73 128 1.4E-7 T 11-10-2018 IPR000644 CBS domain Patl_1616 7b8eb6d841b0f9a2ff0a2ec55d9c1267 216 Pfam PF07681 DoxX 35 120 2.0E-22 T 11-10-2018 IPR032808 DoxX family Patl_0612 a697a1adffae7708a39961505966f38e 208 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 7 197 9.9E-49 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Patl_0612 a697a1adffae7708a39961505966f38e 208 Pfam PF01914 MarC family integral membrane protein 7 200 2.8E-53 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Patl_3721 0309cb33339433f4d359825dab6c3b99 134 Pfam PF14467 Domain of unknown function (DUF4426) 18 134 6.8E-45 T 11-10-2018 IPR025218 Domain of unknown function DUF4426 Patl_3721 0309cb33339433f4d359825dab6c3b99 134 Gene3D G3DSA:2.60.40.3340 4 134 8.2E-37 T 11-10-2018 Patl_4111 5ab33c3720073e3bfd628b1f75c8bc28 139 SUPERFAMILY SSF53850 19 135 3.22E-9 T 11-10-2018 Patl_1661 1a8cee55571cbb4e60ee4393b2e25a66 323 Pfam PF01882 Protein of unknown function DUF58 60 144 3.3E-21 T 11-10-2018 IPR002881 Domain of unknown function DUF58 Patl_1908 a14f20bac0bc71a463add443e46a4381 443 Pfam PF16286 Domain of unknown function (DUF4932) 124 434 7.8E-14 T 11-10-2018 IPR032560 Protein of unknown function DUF4932 Patl_0908 a346b3297eb51887e8f4450ddf2aa6b3 107 Pfam PF11196 Protein of unknown function (DUF2834) 4 98 1.9E-32 T 11-10-2018 IPR021362 Protein of unknown function DUF2834 Patl_0425 c1dab7c357ad701cdbb5cf81398dbdc6 386 Gene3D G3DSA:3.40.50.1970 1 185 3.9E-50 T 11-10-2018 Patl_0425 c1dab7c357ad701cdbb5cf81398dbdc6 386 Pfam PF00465 Iron-containing alcohol dehydrogenase 14 377 1.3E-109 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Patl_0425 c1dab7c357ad701cdbb5cf81398dbdc6 386 SUPERFAMILY SSF56796 4 386 6.8E-114 T 11-10-2018 Patl_0425 c1dab7c357ad701cdbb5cf81398dbdc6 386 Gene3D G3DSA:1.20.1090.10 186 386 7.6E-62 T 11-10-2018 Patl_0425 c1dab7c357ad701cdbb5cf81398dbdc6 386 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Patl_1343 8f0faaacb304ecdca4ff2df54462c865 301 SUPERFAMILY SSF101898 65 280 1.96E-7 T 11-10-2018 Patl_1081 0820f8e6ad3d5ab8df05ea4bb968c298 853 SUPERFAMILY SSF51126 265 443 3.77E-13 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor Patl_1081 0820f8e6ad3d5ab8df05ea4bb968c298 853 SUPERFAMILY SSF51126 431 619 1.05E-8 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor Patl_0670 8a687a660962c7e642b609e19ae8b682 193 Pfam PF05137 Fimbrial assembly protein (PilN) 101 176 8.2E-18 T 11-10-2018 IPR007813 Fimbrial assembly PilN Patl_0907 3a33b6af5cb45c40fa5d0f532a31a3d3 327 SUPERFAMILY SSF143422 16 192 2.09E-17 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Patl_1864 74075ebbe9cef47ac3155fb89fddc3aa 346 Gene3D G3DSA:3.40.190.10 110 212 2.4E-11 T 11-10-2018 Patl_1864 74075ebbe9cef47ac3155fb89fddc3aa 346 SUPERFAMILY SSF53850 34 262 2.7E-24 T 11-10-2018 Patl_1864 74075ebbe9cef47ac3155fb89fddc3aa 346 Gene3D G3DSA:3.40.190.10 63 266 2.4E-11 T 11-10-2018 Patl_1864 74075ebbe9cef47ac3155fb89fddc3aa 346 Pfam PF09084 NMT1/THI5 like 66 254 4.9E-6 T 11-10-2018 IPR015168 SsuA/THI5-like Patl_0384 a6005b03eda9f242432806aa2f7c9c82 313 SUPERFAMILY SSF53850 71 273 3.26E-15 T 11-10-2018 Patl_1745 e352e0efd429188b323b7e6d2f1d10ea 82 Pfam PF09656 Putative transmembrane protein (PGPGW) 18 61 6.6E-7 T 11-10-2018 IPR019099 Uncharacterised protein family PGPGW, transmembrane Patl_3385 464335327cf24db8b14fabbe5fd7cc5b 103 Pfam PF08891 YfcL protein 16 98 5.6E-27 T 11-10-2018 IPR014987 Uncharacterised protein family YfcL Patl_3986 6385c9f7ac3cca7ab0015217679a6a1f 139 Pfam PF13430 Domain of unknown function (DUF4112) 13 114 4.0E-34 T 11-10-2018 IPR025187 Protein of unknown function DUF4112 Patl_3487 aab6799e751b0d431ec0b55879c2d73f 426 Pfam PF13679 Methyltransferase domain 134 245 7.2E-15 T 11-10-2018 IPR025714 Methyltransferase domain Patl_3487 aab6799e751b0d431ec0b55879c2d73f 426 SUPERFAMILY SSF53335 137 246 7.33E-6 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Patl_3487 aab6799e751b0d431ec0b55879c2d73f 426 Gene3D G3DSA:3.40.50.150 111 273 2.4E-5 T 11-10-2018 Patl_3290 b0b49636d04f4330bbe128c0f4c01b10 259 Pfam PF11101 Protein of unknown function (DUF2884) 22 251 4.6E-73 T 11-10-2018 IPR021307 Protein of unknown function DUF2884 Patl_1095 c2fce7c7a8f14f78c62243b7c8d62afb 381 Pfam PF01757 Acyltransferase family 4 352 5.5E-22 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Patl_0132 3d0c02dddc9cc3e35f493e95d22b4a8d 141 SUPERFAMILY SSF53850 22 140 4.16E-16 T 11-10-2018 Patl_0132 3d0c02dddc9cc3e35f493e95d22b4a8d 141 Gene3D G3DSA:3.40.190.10 25 141 2.3E-13 T 11-10-2018 Patl_1928 242e45ac95ec4fddaa282fa13e5e3df1 367 Gene3D G3DSA:3.20.20.70 5 363 2.1E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Patl_1928 242e45ac95ec4fddaa282fa13e5e3df1 367 SUPERFAMILY SSF51395 2 351 2.88E-99 T 11-10-2018 Patl_1928 242e45ac95ec4fddaa282fa13e5e3df1 367 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 351 3.6E-65 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Patl_3637 a58de84f55b1dd360409c2cf5a89c377 352 SUPERFAMILY SSF56935 53 313 1.14E-6 T 11-10-2018 Patl_1474 acd74bf0376c7fd103f3ca63a27d08bc 612 Pfam PF05787 Bacterial protein of unknown function (DUF839) 230 603 2.5E-26 T 11-10-2018 IPR008557 Protein of unknown function DUF839 Patl_3512 e918dff68cf020ae89cc675ff3bc32e1 299 Gene3D G3DSA:2.70.70.10 144 298 2.0E-45 T 11-10-2018 IPR011055 Duplicated hybrid motif Patl_3512 e918dff68cf020ae89cc675ff3bc32e1 299 Pfam PF01551 Peptidase family M23 197 292 2.1E-30 T 11-10-2018 IPR016047 Peptidase M23 Patl_3512 e918dff68cf020ae89cc675ff3bc32e1 299 SUPERFAMILY SSF51261 167 295 8.37E-52 T 11-10-2018 IPR011055 Duplicated hybrid motif Patl_1273 96bb46beaf7d6f208e64d9ac306f73b6 157 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 1.3E-23 T 11-10-2018 IPR009921 Domain of unknown function DUF1456 Patl_1273 96bb46beaf7d6f208e64d9ac306f73b6 157 Pfam PF07308 Protein of unknown function (DUF1456) 85 152 9.8E-25 T 11-10-2018 IPR009921 Domain of unknown function DUF1456 Patl_3249 204f68ceebde661197cf82997661f963 149 Pfam PF03918 Cytochrome C biogenesis protein 10 143 4.5E-49 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family Patl_3249 204f68ceebde661197cf82997661f963 149 Gene3D G3DSA:1.10.8.640 22 107 1.3E-34 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily Patl_1924 bacd9cad89d530b0f85e55da5de17bd7 248 Gene3D G3DSA:3.40.190.10 107 200 1.2E-20 T 11-10-2018 Patl_1924 bacd9cad89d530b0f85e55da5de17bd7 248 SUPERFAMILY SSF53850 31 240 1.33E-29 T 11-10-2018 Patl_1924 bacd9cad89d530b0f85e55da5de17bd7 248 Gene3D G3DSA:3.40.190.10 32 238 1.2E-20 T 11-10-2018 Patl_1924 bacd9cad89d530b0f85e55da5de17bd7 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 239 2.6E-19 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Patl_0432 5ab56ee3bdc4d1a8885430afa05da179 151 Pfam PF06853 Protein of unknown function (DUF1249) 30 143 2.2E-40 T 11-10-2018 IPR009659 Protein of unknown function DUF1249 Patl_3319 f9750c37ac628c4010b5d2fdfed0cea6 422 Pfam PF01384 Phosphate transporter family 26 409 3.4E-113 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 Patl_2775 bc7f05bca72cc96346dfa5544221b818 409 Pfam PF12704 MacB-like periplasmic core domain 21 247 2.3E-40 T 11-10-2018 IPR025857 MacB-like periplasmic core domain Patl_2775 bc7f05bca72cc96346dfa5544221b818 409 Pfam PF02687 FtsX-like permease family 314 401 5.6E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Patl_3715 ee35ff055d84781b2afc9c241eba165e 103 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 76 95 - T 11-10-2018 IPR001876 Zinc finger, RanBP2-type Patl_3715 ee35ff055d84781b2afc9c241eba165e 103 Pfam PF09413 Putative prokaryotic signal transducing protein 1 69 4.7E-17 T 11-10-2018 IPR018551 Domain of unknown function DUF2007 Patl_3575 ca3930035f0b1679abd8b99cf0ecadd4 207 Pfam PF01323 DSBA-like thioredoxin domain 42 184 1.1E-17 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Patl_3575 ca3930035f0b1679abd8b99cf0ecadd4 207 Gene3D G3DSA:3.40.30.10 20 205 1.9E-44 T 11-10-2018 Patl_3575 ca3930035f0b1679abd8b99cf0ecadd4 207 SUPERFAMILY SSF52833 25 200 8.27E-39 T 11-10-2018 IPR036249 Thioredoxin-like superfamily Patl_3575 ca3930035f0b1679abd8b99cf0ecadd4 207 PIRSF PIRSF001488 1 207 2.8E-51 T 11-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL Patl_3486 530b2277c9090c46947f8ed471cf3040 136 Pfam PF03203 MerC mercury resistance protein 11 119 1.8E-29 T 11-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 Patl_0159 85b7069a44a37a61630b1861fa56565e 173 Pfam PF07291 Methylamine utilisation protein MauE 9 161 1.9E-18 T 11-10-2018 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 Patl_3053 54ae98a121248d1e0913c0ba6d896934 1179 Pfam PF01973 Protein of unknown function DUF115 557 711 5.0E-31 T 11-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like Patl_0012 b10f5a599440a07c35126cb50ddd7f5b 175 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 169 14.738 T 11-10-2018 IPR007336 Der GTPase activator GO:0005096 Patl_0012 b10f5a599440a07c35126cb50ddd7f5b 175 Pfam PF04220 Der GTPase activator (YihI) 21 166 5.3E-41 T 11-10-2018 IPR007336 Der GTPase activator GO:0005096 Patl_3142 93aaa4bc80930bb4b58cc3376b98ba7c 626 Pfam PF09822 ABC-type uncharacterized transport system 33 300 2.6E-69 T 11-10-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 Patl_3675 6e6a479693c260a8dbca96ff3857cde0 239 Pfam PF09335 SNARE associated Golgi protein 73 187 6.4E-23 T 11-10-2018 IPR032816 SNARE associated Golgi protein Patl_0975 ced17cbb084301a8acb43ea05fab578d 135 Pfam PF03692 Putative zinc- or iron-chelating domain 3 103 4.3E-6 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Patl_0914 5f6a20e8c42e745fd2f1788fd367b72b 172 Gene3D G3DSA:3.30.240.20 88 160 1.1E-19 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Patl_0914 5f6a20e8c42e745fd2f1788fd367b72b 172 Pfam PF04239 Protein of unknown function (DUF421) 97 159 8.3E-12 T 11-10-2018 IPR007353 Protein of unknown function DUF421 Patl_3378 25f17a79c16b663224f0ef7e6b4debf2 349 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 341 6.7E-102 T 11-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 Patl_1473 d2043bd247cd69e17e6694f354530bae 568 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 44 - T 11-10-2018 IPR010916 TonB box, conserved site Patl_2481 6376b700fa522201ffe8499ed4b28f6b 356 Pfam PF01594 AI-2E family transporter 20 345 2.1E-70 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like Patl_0459 5281046f6dd88dce9d08bf876807af84 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 6.0E-22 T 11-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM Patl_3720 56b506c3023a9b6ffc7f1dfe8fcd174f 180 Pfam PF02325 YGGT family 9 78 1.2E-18 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 Patl_3720 56b506c3023a9b6ffc7f1dfe8fcd174f 180 Pfam PF02325 YGGT family 106 173 9.6E-20 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 Patl_1858 a57da8019f359def44c1525b9cb6dfb2 405 TIGRFAM TIGR03863 PQQ_ABC_bind: ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system 59 405 1.8E-150 T 11-10-2018 IPR022478 ABC transporter, substrate-binding protein, PQQ-dependent alcohol dehydrogenase system Patl_1858 a57da8019f359def44c1525b9cb6dfb2 405 Gene3D G3DSA:3.40.50.2300 169 289 5.1E-11 T 11-10-2018 Patl_1858 a57da8019f359def44c1525b9cb6dfb2 405 Gene3D G3DSA:3.40.50.2300 73 342 5.1E-11 T 11-10-2018 Patl_1858 a57da8019f359def44c1525b9cb6dfb2 405 Pfam PF13458 Periplasmic binding protein 71 226 2.0E-8 T 11-10-2018 IPR028081 Leucine-binding protein domain Patl_1858 a57da8019f359def44c1525b9cb6dfb2 405 SUPERFAMILY SSF53822 68 372 4.71E-24 T 11-10-2018 IPR028082 Periplasmic binding protein-like I Patl_0557 d4e52fcbdf90a21b1eeea79223c121b5 110 SUPERFAMILY SSF52091 22 108 5.49E-13 T 11-10-2018 IPR036513 STAS domain superfamily Patl_0557 d4e52fcbdf90a21b1eeea79223c121b5 110 Pfam PF13466 STAS domain 23 104 2.2E-12 T 11-10-2018 IPR002645 STAS domain Patl_0557 d4e52fcbdf90a21b1eeea79223c121b5 110 Gene3D G3DSA:3.30.750.24 20 110 1.0E-13 T 11-10-2018 IPR036513 STAS domain superfamily Patl_2837 a8524ee76440a44777305abc78fe1c10 320 TIGRFAM TIGR04215 choice_anch_A: choice-of-anchor A domain 30 281 4.7E-51 T 11-10-2018 IPR026588 Choice-of-anchor A domain Patl_4149 08e202bff9d4afff8756f2ff346fc5e1 190 Pfam PF04366 Las17-binding protein actin regulator 102 190 1.1E-5 T 11-10-2018 IPR007461 Ysc84 actin-binding domain Patl_4200 2e4add5b3d1e4722c7b7ea6c6210c121 143 Pfam PF11351 Holin of 3TMs, for gene-transfer release 9 105 1.6E-8 T 11-10-2018 IPR021497 Holin of 3TMs, for gene-transfer release Patl_0918 b7cdcc013fef9c834e80ce3d3a0ef1ba 193 Pfam PF09347 Domain of unknown function (DUF1989) 4 168 1.8E-46 T 11-10-2018 IPR018959 Protein of unknown function DUF1989 Patl_1384 9e617becd9cd10b006b32369a8b9ae71 213 Pfam PF02371 Transposase IS116/IS110/IS902 family 90 172 1.2E-20 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Patl_2685 024486c63fbd4e2f3af540bcba77ee3d 199 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 44 182 3.3E-33 T 11-10-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 Patl_2369 b14a1a9a53e6b91a6fbb2aefd200d8f1 148 Pfam PF04217 Protein of unknown function, DUF412 5 145 2.7E-57 T 11-10-2018 IPR007334 Uncharacterised protein family UPF0208 Patl_4150 71d24fccde53b6b6621124da02a2a899 296 PRINTS PR01805 VacJ lipoprotein signature 76 89 8.9E-20 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Patl_4150 71d24fccde53b6b6621124da02a2a899 296 PRINTS PR01805 VacJ lipoprotein signature 181 198 8.9E-20 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Patl_4150 71d24fccde53b6b6621124da02a2a899 296 PRINTS PR01805 VacJ lipoprotein signature 93 109 8.9E-20 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Patl_4150 71d24fccde53b6b6621124da02a2a899 296 PRINTS PR01805 VacJ lipoprotein signature 144 161 8.9E-20 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Patl_4150 71d24fccde53b6b6621124da02a2a899 296 Pfam PF04333 MlaA lipoprotein 75 265 1.2E-58 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 Patl_0711 7b4a7b6b5a918f1467e36496d8f9adcd 260 Gene3D G3DSA:2.60.120.560 17 169 1.4E-12 T 11-10-2018 Patl_1138 f67bc88ebcca0239554bc7635348114e 269 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 269 43.513 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Patl_1138 f67bc88ebcca0239554bc7635348114e 269 Pfam PF02654 Cobalamin-5-phosphate synthase 15 250 5.2E-50 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Patl_1138 f67bc88ebcca0239554bc7635348114e 269 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 14 250 4.3E-36 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Patl_3056 dbb6f38b4359c357b1410adcdfab3ef6 236 Pfam PF08889 WbqC-like protein family 7 220 1.8E-71 T 11-10-2018 IPR014985 WbqC-like protein family Patl_2771 644a02194c384f99290c847e57ed88e0 141 Pfam PF04657 Putative inner membrane exporter, YdcZ 1 137 5.3E-25 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ Patl_3143 f9316b41799aef12f637d0f1d09f466e 244 Pfam PF12698 ABC-2 family transporter protein 56 236 1.3E-10 T 11-10-2018 Patl_3988 bef8a82496e4a2c3ecd480e8eb7ded99 532 Pfam PF03806 AbgT putative transporter family 22 530 5.1E-214 T 11-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 Patl_1119 9f3cc1ba7ce14d956579fc0855346194 452 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 96 336 2.9E-20 T 11-10-2018 IPR010839 Acyclic terpene utilisation Patl_1760 8c96cf78b5ad644439186673b4ff16e3 130 Pfam PF11042 Protein of unknown function (DUF2750) 22 121 1.7E-31 T 11-10-2018 IPR021284 Protein of unknown function DUF2750 Patl_1287 8fbedb23db7dbb9d002593d4100cb53e 427 Pfam PF01566 Natural resistance-associated macrophage protein 29 300 2.3E-11 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Patl_4001 fb83df245602c492f80216db7072ceda 192 Pfam PF02563 Polysaccharide biosynthesis/export protein 41 115 4.3E-18 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 Patl_4001 fb83df245602c492f80216db7072ceda 192 Gene3D G3DSA:3.30.1950.10 48 119 2.1E-17 T 11-10-2018 Patl_4001 fb83df245602c492f80216db7072ceda 192 Gene3D G3DSA:3.10.560.10 39 176 2.1E-17 T 11-10-2018 Patl_1445 b31927a3b4169761cae8451967f9527f 435 Pfam PF02667 Short chain fatty acid transporter 1 435 1.1E-146 T 11-10-2018 IPR006160 Short chain fatty acid transporter AtoE Patl_4185 12867d5e7307073e030b31adb5d111ea 472 SUPERFAMILY SSF51905 8 265 1.38E-15 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_4185 12867d5e7307073e030b31adb5d111ea 472 Gene3D G3DSA:3.50.50.60 1 145 4.0E-9 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Patl_1143 e4c44e228a0b7ffa62faa7a0d9089497 377 Pfam PF03929 PepSY-associated TM region 2 331 1.6E-49 T 11-10-2018 IPR005625 PepSY-associated TM protein Patl_0945 df17bd2f90973d8a31d9274de5c5248e 264 Pfam PF01925 Sulfite exporter TauE/SafE 6 257 2.2E-38 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Patl_0879 0483d78221b3b69932b64b85e525fdb8 874 SUPERFAMILY SSF51126 337 725 3.77E-12 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor Patl_2641 da70bded527faf666fd17ab23e550eaa 398 SUPERFAMILY SSF63829 58 393 2.13E-39 T 11-10-2018 Patl_2641 da70bded527faf666fd17ab23e550eaa 398 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 84 389 3.9E-35 T 11-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region Patl_1094 734f2b5f4575b347cda63e5e77ef7b19 274 Pfam PF04230 Polysaccharide pyruvyl transferase 72 216 1.5E-6 T 11-10-2018 IPR007345 Polysaccharide pyruvyl transferase Patl_0524 92146278b96821b58b4daa51f21a34a3 92 Pfam PF13937 Domain of unknown function (DUF4212) 13 90 1.0E-34 T 11-10-2018 IPR019886 Sodium symporter small subunit, predicted Patl_0524 92146278b96821b58b4daa51f21a34a3 92 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 15 91 4.4E-36 T 11-10-2018 IPR019886 Sodium symporter small subunit, predicted Patl_2327 ddc69487d2b1b58bf97f5ed95ac13fab 135 Pfam PF07681 DoxX 9 89 3.4E-16 T 11-10-2018 IPR032808 DoxX family Patl_1997 1669f4337d65b12a188254925a1f1fd5 73 Pfam PF11197 Protein of unknown function (DUF2835) 4 71 2.0E-25 T 11-10-2018 IPR021363 Protein of unknown function DUF2835 Patl_2026 9f48f2ecf504e75cd5563ca1da1cbdbb 119 Pfam PF12487 Protein of unknown function (DUF3703) 5 113 2.7E-37 T 11-10-2018 IPR022172 Protein of unknown function DUF3703 Patl_0261 a8cb608bdce41ff9c163684bf45deb61 1259 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 914 1248 2.9E-57 T 11-10-2018 IPR007452 Translocation and assembly module TamB Patl_2989 a9ff69f52e75d41bbf82ae1c83463c9e 450 Pfam PF01618 MotA/TolQ/ExbB proton channel family 317 433 4.5E-27 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Patl_2989 a9ff69f52e75d41bbf82ae1c83463c9e 450 PIRSF PIRSF037714 1 450 4.3E-179 T 11-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein Patl_0118 7471b04871d2666fbe1604e961062e6b 395 Gene3D G3DSA:1.50.10.10 1 393 7.4E-135 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Patl_0118 7471b04871d2666fbe1604e961062e6b 395 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 30 381 1.3E-96 T 11-10-2018 Patl_0118 7471b04871d2666fbe1604e961062e6b 395 SUPERFAMILY SSF48208 2 391 2.06E-115 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Patl_1884 18e2be150ff1b89b1f9e2de37b9a54ae 457 Pfam PF03553 Na+/H+ antiporter family 172 452 9.3E-45 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Patl_4086 a366f7ccc981002612c9b0607ffa16ea 146 Gene3D G3DSA:1.20.120.520 1 141 2.4E-9 T 11-10-2018 Patl_4086 a366f7ccc981002612c9b0607ffa16ea 146 Pfam PF01814 Hemerythrin HHE cation binding domain 3 120 1.7E-13 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 Patl_3068 6359aee23f7e1b948e56c4b0624286eb 433 Pfam PF05159 Capsule polysaccharide biosynthesis protein 257 363 5.1E-7 T 11-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 Patl_3589 7119519ccdce9888a0f34adc12ecfdb7 728 SUPERFAMILY SSF52540 4 516 1.77E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_0771 64fc7e2a525033c1bced4e832452b9fe 174 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 35 163 1.0E-23 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Patl_2649 08241a6e251c1dec9448a11c68695860 218 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 12 205 7.7E-12 T 11-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 Patl_0576 c18dd7a53a2ac303fd275c778450899c 79 Pfam PF14086 Domain of unknown function (DUF4266) 30 79 3.3E-21 T 11-10-2018 IPR025362 Domain of unknown function DUF4266 Patl_3806 aac22cbf0ef1585fb9214d0b75fdee50 176 Pfam PF11220 Protein of unknown function (DUF3015) 56 167 1.1E-12 T 11-10-2018 IPR021383 Protein of unknown function DUF3015 Patl_1724 5c6ae873689c2e4aa23f71163995cea6 475 Pfam PF10972 Peptidoglycan-binding protein, CsiV 21 466 1.8E-84 T 11-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV Patl_3186 fe9bc4dd518528b767eaafb4f3c93eb0 341 Pfam PF12069 Protein of unknown function (DUF3549) 2 336 2.1E-120 T 11-10-2018 IPR021936 Protein of unknown function DUF3549 Patl_3550 15bcc0ce106a46234781ea413b98a605 1074 Pfam PF05359 Domain of Unknown Function (DUF748) 663 808 2.9E-33 T 11-10-2018 IPR008023 Protein of unknown function DUF748 Patl_3550 15bcc0ce106a46234781ea413b98a605 1074 Pfam PF05359 Domain of Unknown Function (DUF748) 426 584 1.6E-18 T 11-10-2018 IPR008023 Protein of unknown function DUF748 Patl_3550 15bcc0ce106a46234781ea413b98a605 1074 Pfam PF05359 Domain of Unknown Function (DUF748) 162 314 1.1E-16 T 11-10-2018 IPR008023 Protein of unknown function DUF748 Patl_3767 5343547a3446964e36157c5b99f782bb 169 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 66 151 1.1E-11 T 11-10-2018 IPR026392 Exosortase/Archaeosortase domain Patl_0179 187bbd559d37d1d083f817f88056f4f9 189 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 34 7.0E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site Patl_2387 135b0723e97aadd46260804214f2cb53 153 Pfam PF06127 Protein of unknown function (DUF962) 3 148 2.3E-20 T 11-10-2018 IPR009305 Protein of unknown function DUF962 Patl_2908 a27e6b133df7532865f773b459eb8982 340 Gene3D G3DSA:3.40.50.300 8 194 4.1E-42 T 11-10-2018 Patl_2908 a27e6b133df7532865f773b459eb8982 340 SUPERFAMILY SSF52540 11 182 5.77E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Patl_2908 a27e6b133df7532865f773b459eb8982 340 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 179 2.6E-37 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Patl_0241 2e5d20ad098e0c8afe5c486bdde59872 247 Pfam PF01203 Type II secretion system (T2SS), protein N 37 245 1.1E-53 T 11-10-2018 IPR022792 Type II secretion system, protein N Patl_1655 56cfea07dde9f9c6ef56ea277818f899 235 Pfam PF11859 Protein of unknown function (DUF3379) 1 229 1.6E-90 T 11-10-2018 IPR021806 Protein of unknown function DUF3379 Patl_0323 66785b74fe363dd83122f56544b8aeda 503 SUPERFAMILY SSF69318 180 446 1.01E-20 T 11-10-2018 Patl_2875 5dd34ded2175fa9c5a79b1763d3edb0e 331 Pfam PF03601 Conserved hypothetical protein 698 14 312 3.2E-67 T 11-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 Patl_3463 7ab8edab8fa288dd21bd548d2959fc3e 200 Pfam PF04367 Protein of unknown function (DUF502) 53 155 1.9E-23 T 11-10-2018 IPR007462 Protein of unknown function DUF502 Patl_1077 9fde9a180be9717ddb2a2568b6e0e4a2 433 Pfam PF04932 O-Antigen ligase 206 348 1.3E-20 T 11-10-2018 IPR007016 O-antigen ligase-related Patl_3941 25b7d42585dbbdb54fe5f4757c3b1ada 196 Pfam PF01914 MarC family integral membrane protein 4 191 5.6E-55 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Patl_0931 1f1cdb0393af6df5fb26e5ad6f4992a5 499 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 50 111 2.2E-12 T 11-10-2018 Patl_0931 1f1cdb0393af6df5fb26e5ad6f4992a5 499 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 157 217 9.8E-9 T 11-10-2018 Patl_0931 1f1cdb0393af6df5fb26e5ad6f4992a5 499 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 263 323 9.4E-15 T 11-10-2018 Patl_0931 1f1cdb0393af6df5fb26e5ad6f4992a5 499 SUPERFAMILY SSF69318 121 395 1.83E-36 T 11-10-2018 Patl_4274 dc694e9156735a7c743c91f05aa6fa5d 412 Pfam PF04116 Fatty acid hydroxylase superfamily 80 211 9.2E-28 T 11-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 Patl_2917 ebaa0f616b7f74b173b2b06c2e12d598 335 Pfam PF01435 Peptidase family M48 157 334 5.6E-22 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Patl_1220 401989697d84d9e88af800b4e8dcbba2 204 Pfam PF06693 Protein of unknown function (DUF1190) 41 193 3.1E-50 T 11-10-2018 IPR009576 Biofilm formation YgiB Patl_4253 fff87162debe84a3f5e9ec8fb504cd63 408 Pfam PF03929 PepSY-associated TM region 27 393 3.1E-52 T 11-10-2018 IPR005625 PepSY-associated TM protein Patl_2278 2affcc7c4178f0f03d039edee8d4ae40 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 127 1.9E-13 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 Patl_3348 6ac00789bb12126eb45d79def1d90552 270 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 268 1.3E-31 T 11-10-2018 IPR031347 Protein AmpE Patl_1726 715b5fce7c766ae9c89a2f66f431c5f1 198 ProDom PD017907 3-DEHYDROQUINATE UPF0245 SYNTHASE LYASE PREDICTED SYNTHASE-LIKE ALTERNATIVE T19N8 MM1272 MK1408 75 187 0.001 T 11-10-2018 IPR002812 3-dehydroquinate synthase GO:0003856|GO:0009073|GO:0016491|GO:0055114 KEGG: 00400+1.4.1.24|MetaCyc: PWY-6160 Patl_2136 dd48cf73b9cfe47e4b2e0a898f77b8ef 863 Pfam PF11739 Dicarboxylate transport 662 853 5.7E-51 T 11-10-2018 IPR021730 Dicarboxylate transport Patl_0065 1a0162952c109572456d703e5c512a7f 137 Pfam PF03748 Flagellar basal body-associated protein FliL 33 135 2.1E-15 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Patl_1979 ace8eee3df907106a8b7f2830f3adec7 431 Pfam PF02447 GntP family permease 4 140 6.5E-11 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 Patl_2545 e997faac979bad45b059cef8e5b78b21 238 Pfam PF07277 SapC 8 231 4.8E-72 T 11-10-2018 IPR010836 SapC Patl_3946 b77028638fdb6bea36c039774cc07d78 326 PIRSF PIRSF003097 21 322 1.8E-71 T 11-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Patl_3602 bea2bb154815be78537754d9a5a05272 205 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 116 191 2.4E-16 T 11-10-2018 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal Patl_3387 c08652fbf64c7931fa67066abf72d576 210 Pfam PF04315 Elongation factor P hydroxylase 34 194 6.9E-76 T 11-10-2018 IPR007411 Elongation factor P hydroxylase Patl_0813 dbad7b69d6fef70a8fe40d7d424bfde6 101 Gene3D G3DSA:2.40.160.10 1 101 1.1E-5 T 11-10-2018 IPR023614 Porin domain superfamily Patl_0813 dbad7b69d6fef70a8fe40d7d424bfde6 101 SUPERFAMILY SSF56935 7 101 2.04E-8 T 11-10-2018 Patl_1526 3496fb3e5f6e11e11589135a5b1a478d 343 Pfam PF14240 YHYH protein 202 292 5.4E-10 T 11-10-2018 IPR025924 YHYH domain Patl_2318 a6a4163f5e3e38bd4c199c61727e0bcd 441 Pfam PF13557 Putative MetA-pathway of phenol degradation 250 431 2.2E-5 T 11-10-2018 IPR025737 MetA-pathway of phenol degradation, putative Patl_1954 71cc0affee77489605fa7bfb90b8c27b 112 Pfam PF04320 Protein with unknown function (DUF469) 9 110 1.9E-30 T 11-10-2018 IPR007416 Protein of unknown function DUF469 Patl_0789 f9b4f11cd24c3a0f988ba8ea552e8454 280 Pfam PF07589 PEP-CTERM motif 256 277 3.7E-4 T 11-10-2018 IPR013424 PEP-CTERM protein-sorting domain Patl_0399 179a447248efb8ec57c6a299ccdac596 733 SUPERFAMILY SSF52490 88 328 9.03E-6 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Patl_4058 fe9e9a56c3a52c5de10627e905a367ef 259 Pfam PF11101 Protein of unknown function (DUF2884) 23 252 2.0E-73 T 11-10-2018 IPR021307 Protein of unknown function DUF2884 Patl_1225 3dcbe0369badf559eb1b022a42cfc1e2 129 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 3 128 9.2E-39 T 11-10-2018 IPR019231 Protein of unknown function DUF2170 Patl_3407 b59a4968a51d401dca01c3fa2c5d8809 128 Pfam PF10067 Predicted membrane protein (DUF2306) 8 107 6.0E-15 T 11-10-2018 IPR018750 Protein of unknown function DUF2306, membrane Patl_2757 8608ca89bd333390635f7a197a0cc329 623 Pfam PF17517 IgGFc binding protein 135 422 5.4E-63 T 11-10-2018 IPR035234 IgGFc-binding protein, N-terminal Patl_2757 8608ca89bd333390635f7a197a0cc329 623 ProSitePatterns PS00018 EF-hand calcium-binding domain. 596 608 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site Patl_3221 ba95ed9d8e29f938aa8aee8251085c3f 293 SUPERFAMILY SSF53448 2 204 1.58E-10 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_3221 ba95ed9d8e29f938aa8aee8251085c3f 293 Gene3D G3DSA:3.90.550.10 1 225 7.8E-15 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Patl_2994 4a3e35c5b347bb18af00b1d2dc2aedc8 88 Pfam PF10719 Late competence development protein ComFB 8 84 2.3E-22 T 11-10-2018 IPR019657 Late competence development protein ComFB Patl_2816 fedaae61508d18f49d00b78b313f6aa7 124 Pfam PF14375 Cysteine-rich CWC 73 107 9.2E-8 T 11-10-2018 IPR032720 Cysteine-rich CWC Patl_2355 099fb29dce35597c9c5780f49f504799 194 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 14 194 4.3E-60 T 11-10-2018 IPR018636 Protein of unknown function DUF2058 Patl_1346 f14d9fd325a846cb7dde8ac396939a67 215 Pfam PF04973 Nicotinamide mononucleotide transporter 26 202 7.3E-46 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 Patl_1346 f14d9fd325a846cb7dde8ac396939a67 215 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 25 203 4.4E-16 T 11-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 Patl_0734 b866644da53ac971b39c2f8662c24a2c 207 Gene3D G3DSA:3.30.40.60 30 130 4.4E-7 T 11-10-2018 Patl_0133 b847df8c5907a751cf479fbb6833d5da 375 SUPERFAMILY SSF56935 20 375 2.72E-26 T 11-10-2018 Patl_2753 e2303c8fd70149a2b68ad2f7a8fe736d 298 SUPERFAMILY SSF54593 158 296 9.66E-6 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Patl_3570 e7a968e9c712ff1ca5be53a62ee844e8 126 Pfam PF11456 Protein of unknown function (DUF3019) 25 125 1.1E-22 T 11-10-2018 IPR021559 Protein of unknown function DUF3019 Patl_1167 2100a1696c2c5e728117466693fe4728 536 SUPERFAMILY SSF56935 415 525 8.11E-5 T 11-10-2018 Patl_1167 2100a1696c2c5e728117466693fe4728 536 Pfam PF10082 Putative beta-barrel porin 2 451 535 4.7E-6 T 11-10-2018 IPR018759 Putative beta-barrel porin 2 Patl_2069 bc2ce3ca4e85b33490263e7de9031bb7 169 Pfam PF05751 FixH 17 157 1.2E-42 T 11-10-2018 IPR008620 Nitrogen fixation protein FixH Patl_1983 9a0b7b6864074cccddd991c9cbf2fabb 144 Pfam PF09980 Predicted membrane protein (DUF2214) 4 141 3.4E-39 T 11-10-2018 IPR018706 Protein of unknown function DUF2214, membrane Patl_2409 f397ffa3d29cf1825d98b4ed9364faeb 183 Pfam PF01169 Uncharacterized protein family UPF0016 6 80 8.9E-20 T 11-10-2018 IPR001727 Gdt1 family Patl_2409 f397ffa3d29cf1825d98b4ed9364faeb 183 Pfam PF01169 Uncharacterized protein family UPF0016 105 178 7.1E-22 T 11-10-2018 IPR001727 Gdt1 family Patl_1496 36185a6c3b979eaf8ed8daaf5027d44a 241 Pfam PF02517 CAAX protease self-immunity 137 218 1.9E-18 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Patl_2607 18a5f864ed8472d882adbf549ce5758c 484 SUPERFAMILY SSF63825 222 389 5.23E-7 T 11-10-2018 Patl_2607 18a5f864ed8472d882adbf549ce5758c 484 Pfam PF05787 Bacterial protein of unknown function (DUF839) 151 470 2.0E-41 T 11-10-2018 IPR008557 Protein of unknown function DUF839 Patl_2607 18a5f864ed8472d882adbf549ce5758c 484 Pfam PF05787 Bacterial protein of unknown function (DUF839) 62 148 2.6E-4 T 11-10-2018 IPR008557 Protein of unknown function DUF839 Patl_0401 8822124efba5882599da9066de4c2b13 131 Pfam PF08985 DP-EP family 6 130 3.8E-38 T 11-10-2018 IPR015078 DP-EP family Patl_2272 b6b0614d217d484a605688f13532e8ea 208 Pfam PF03458 UPF0126 domain 94 166 1.3E-16 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 Patl_2272 b6b0614d217d484a605688f13532e8ea 208 Pfam PF03458 UPF0126 domain 8 80 1.0E-18 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 Patl_0749 a025c71620e2454f3679ce209d9908b4 83 Pfam PF09834 Predicted membrane protein (DUF2061) 1 51 4.8E-22 T 11-10-2018 IPR018638 Domain of unknown function DUF2061, membrane Patl_1700 009fcfd2c9f699fcd289b9a7b65ecdde 72 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 17 71 4.0E-25 T 11-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor Patl_1700 009fcfd2c9f699fcd289b9a7b65ecdde 72 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 6 70 9.5E-31 T 11-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor Patl_0450 7972fa5cdfc3852f2e9f69ae294a31ef 56 Pfam PF01679 Proteolipid membrane potential modulator 7 52 8.0E-18 T 11-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 Patl_3359 a7c1a0f3b3b01af465ab46b44ef5f48e 410 SUPERFAMILY SSF56935 232 408 1.13E-6 T 11-10-2018 Patl_3413 b289dc5f0600dcc9b4ee7be0bfa678eb 380 Pfam PF03929 PepSY-associated TM region 11 368 1.7E-47 T 11-10-2018 IPR005625 PepSY-associated TM protein Patl_2398 a394657dd0a5357e853e2f55e7fa2082 203 Pfam PF07007 Lysozyme inhibitor LprI 46 105 3.4E-4 T 11-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal Patl_1100 c7563c168f9116126df7f914fa2c32ee 274 Pfam PF04230 Polysaccharide pyruvyl transferase 100 216 1.9E-6 T 11-10-2018 IPR007345 Polysaccharide pyruvyl transferase Patl_4242 a9669c467463d84c13e774ce90b5eb7f 69 Pfam PF11137 Protein of unknown function (DUF2909) 3 62 4.2E-19 T 11-10-2018 IPR021313 Protein of unknown function DUF2909 Patl_0662 a3679677838047d523d28e4a2b83f4cc 65 Pfam PF11174 Protein of unknown function (DUF2970) 8 63 2.5E-22 T 11-10-2018 IPR021344 Protein of unknown function DUF2970 Patl_2062 7a93d3d8485cb6b14e899e07533291ad 223 Pfam PF11205 Protein of unknown function (DUF2987) 31 175 6.8E-49 T 11-10-2018 IPR021370 Protein of unknown function DUF2987 Patl_3632 cd13eda4d96614d19ea2d2eb97b80656 131 Pfam PF12514 Protein of unknown function (DUF3718) 33 100 2.0E-22 T 11-10-2018 IPR022193 Protein of unknown function DUF3718 Patl_2293 3d82bd342228a0ba4b4d744b2c85cadf 176 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 160 2.8E-27 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Patl_2245 f61db92b80e36eafd3f56d59c4a759f8 1233 Pfam PF12128 Protein of unknown function (DUF3584) 8 1191 0.0 T 11-10-2018 IPR021979 Protein of unknown function DUF3584 Patl_1777 457acec9d287c613dcf1d28bad78f2f5 112 Pfam PF11872 Protein of unknown function (DUF3392) 6 109 3.6E-37 T 11-10-2018 IPR021813 Protein of unknown function DUF3392 Patl_0702 599f053687be3cb616155e6dc9eed09b 368 Pfam PF10758 Protein of unknown function (DUF2586) 4 364 1.4E-157 T 11-10-2018 IPR019694 Bacteriophage HP1, Orf23 Patl_3643 bbdb445795ba5f58654a5bb076d5931d 412 Pfam PF01566 Natural resistance-associated macrophage protein 27 384 1.0E-73 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Patl_2241 de0491acc449cb02f7047207f21a932d 408 Pfam PF02687 FtsX-like permease family 314 390 6.5E-11 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Patl_3357 366810fbc6cd98f1ef29a44fdc53ff0d 268 Pfam PF04338 Protein of unknown function, DUF481 50 267 2.7E-54 T 11-10-2018 IPR007433 Protein of unknown function DUF481 Patl_2242 0bd387059ca91ed99cdcc8b8459bffab 302 SUPERFAMILY SSF56726 144 294 6.54E-6 T 11-10-2018 IPR036078 Spo11/DNA topoisomerase VI subunit A superfamily GO:0000737|GO:0003677|GO:0005694 Reactome: R-HSA-912446 Patl_3309 3f230a3327096bfa1a16aacc91d192b8 307 Gene3D G3DSA:3.40.50.300 31 287 5.2E-5 T 11-10-2018