locus-tag class description D172_000015 PF00132 Bacterial transferase hexapeptide (six repeats) D172_000020 PF07369 Protein of unknown function (DUF1488) D172_000030 PF01152 Bacterial-like globin D172_000035 PF01218 Coproporphyrinogen III oxidase D172_000045 PF01396 Topoisomerase DNA binding C4 zinc finger D172_000055 PF02481 DNA recombination-mediator protein A D172_000055 PF17782 DprA winged helix domain D172_000075 PF01029 NusB family D172_000075 PF01189 16S rRNA methyltransferase RsmB/F D172_000080 PF02080 TrkA-C domain D172_000080 PF02254 TrkA-N domain D172_000105 PF02386 Cation transport protein D172_000110 PF01205 Uncharacterized protein family UPF0029 D172_000110 PF09186 Domain of unknown function (DUF1949) D172_000120 PF01464 Transglycosylase SLT domain D172_000120 PF14718 Soluble lytic murein transglycosylase L domain D172_000125 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D172_000125 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D172_000125 PF00378 Enoyl-CoA hydratase/isomerase D172_000160 PF01751 Toprim domain D172_000160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_000160 PF00204 DNA gyrase B D172_000160 PF00986 DNA gyrase B subunit, carboxyl terminus D172_000160 PF18053 DNA gyrase B subunit insert domain D172_000170 PF00712 DNA polymerase III beta subunit, N-terminal domain D172_000170 PF02768 DNA polymerase III beta subunit, C-terminal domain D172_000170 PF02767 DNA polymerase III beta subunit, central domain D172_000175 PF08299 Bacterial dnaA protein helix-turn-helix D172_000175 PF00308 Bacterial dnaA protein D172_000175 PF11638 DnaA N-terminal domain D172_000205 PF00258 Flavodoxin D172_000220 PF13614 AAA domain D172_000225 PF17762 HTH domain found in ParB protein D172_000225 PF02195 ParB-like nuclease domain D172_000230 PF03899 ATP synthase I chain D172_000275 PF18500 CadC C-terminal domain 1 D172_000275 PF00486 Transcriptional regulatory protein, C terminal D172_000340 PF01464 Transglycosylase SLT domain D172_000355 PF00989 PAS fold D172_000355 PF00512 His Kinase A (phospho-acceptor) domain D172_000355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_000360 PF02954 Bacterial regulatory protein, Fis family D172_000360 PF00072 Response regulator receiver domain D172_000360 PF00158 Sigma-54 interaction domain D172_000365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D172_000365 PF00529 HlyD membrane-fusion protein of T1SS D172_000370 PF00005 ABC transporter D172_000375 PF02687 FtsX-like permease family D172_000375 PF12704 MacB-like periplasmic core domain D172_000405 PF12464 Maltose acetyltransferase D172_000405 PF14602 Hexapeptide repeat of succinyl-transferase D172_000410 PF00455 DeoR C terminal sensor domain D172_000410 PF08220 DeoR-like helix-turn-helix domain D172_000415 PF01380 SIS domain D172_000425 PF00271 Helicase conserved C-terminal domain D172_000425 PF00270 DEAD/DEAH box helicase D172_000435 PF07715 TonB-dependent Receptor Plug Domain D172_000435 PF00593 TonB dependent receptor D172_000450 PF00313 'Cold-shock' DNA-binding domain D172_000455 PF00313 'Cold-shock' DNA-binding domain D172_000465 PF00245 Alkaline phosphatase D172_000470 PF00245 Alkaline phosphatase D172_000485 PF00999 Sodium/hydrogen exchanger family D172_000485 PF02254 TrkA-N domain D172_000490 PF02013 Cellulose or protein binding domain D172_000490 PF00553 Cellulose binding domain D172_000490 PF02927 Cellulase N-terminal ig-like domain D172_000490 PF00759 Glycosyl hydrolase family 9 D172_000490 PF00801 PKD domain D172_000500 PF00593 TonB dependent receptor D172_000500 PF07715 TonB-dependent Receptor Plug Domain D172_000520 PF04304 Protein of unknown function (DUF454) D172_000535 PF01263 Aldose 1-epimerase D172_000545 PF03703 Bacterial PH domain D172_000565 PF02567 Phenazine biosynthesis-like protein D172_000580 PF00873 AcrB/AcrD/AcrF family D172_000595 PF13860 FlgD Ig-like domain D172_000595 PF05922 Peptidase inhibitor I9 D172_000595 PF02225 PA domain D172_000595 PF00082 Subtilase family D172_000600 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D172_000600 PF00326 Prolyl oligopeptidase family D172_000605 PF00072 Response regulator receiver domain D172_000605 PF09308 LuxQ, periplasmic D172_000605 PF00512 His Kinase A (phospho-acceptor) domain D172_000605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_000610 PF00486 Transcriptional regulatory protein, C terminal D172_000610 PF00072 Response regulator receiver domain D172_000630 PF09335 SNARE associated Golgi protein D172_000635 PF02152 Dihydroneopterin aldolase D172_000660 PF00072 Response regulator receiver domain D172_000660 PF01627 Hpt domain D172_000660 PF00512 His Kinase A (phospho-acceptor) domain D172_000660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_000660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D172_000660 PF00672 HAMP domain D172_000665 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding D172_000665 PF18381 YcaO cyclodehydratase C-terminal domain D172_000675 PF16123 Hydroxyacylglutathione hydrolase C-terminus D172_000675 PF00753 Metallo-beta-lactamase superfamily D172_000680 PF00583 Acetyltransferase (GNAT) family D172_000680 PF00795 Carbon-nitrogen hydrolase D172_000685 PF00893 Small Multidrug Resistance protein D172_000705 PF03965 Penicillinase repressor D172_000710 PF01479 S4 domain D172_000710 PF00849 RNA pseudouridylate synthase D172_000735 PF13419 Haloacid dehalogenase-like hydrolase D172_000740 PF00589 Phage integrase family D172_000740 PF02899 Phage integrase, N-terminal SAM-like domain D172_000755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D172_000755 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D172_000770 PF02230 Phospholipase/Carboxylesterase D172_000780 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D172_000780 PF03900 Porphobilinogen deaminase, C-terminal domain D172_000785 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase D172_000795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_000795 PF00512 His Kinase A (phospho-acceptor) domain D172_000795 PF09308 LuxQ, periplasmic D172_000795 PF00072 Response regulator receiver domain D172_000805 PF00392 Bacterial regulatory proteins, gntR family D172_000805 PF07085 DRTGG domain D172_000805 PF00571 CBS domain D172_000805 PF03061 Thioesterase superfamily D172_000810 PF00175 Oxidoreductase NAD-binding domain D172_000820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_000820 PF00672 HAMP domain D172_000830 PF05661 Protein of unknown function (DUF808) D172_000840 PF04389 Peptidase family M28 D172_000840 PF04151 Bacterial pre-peptidase C-terminal domain D172_000845 PF00593 TonB dependent receptor D172_000845 PF07715 TonB-dependent Receptor Plug Domain D172_000850 PF00271 Helicase conserved C-terminal domain D172_000850 PF03880 DbpA RNA binding domain D172_000850 PF00270 DEAD/DEAH box helicase D172_000860 PF00672 HAMP domain D172_000860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_000860 PF00512 His Kinase A (phospho-acceptor) domain D172_000860 PF01627 Hpt domain D172_000860 PF00072 Response regulator receiver domain D172_000860 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D172_000865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D172_000865 PF07498 Rho termination factor, N-terminal domain D172_000865 PF07497 Rho termination factor, RNA-binding domain D172_000870 PF00085 Thioredoxin D172_000875 PF00270 DEAD/DEAH box helicase D172_000875 PF00271 Helicase conserved C-terminal domain D172_000905 PF17176 tRNA-binding domain D172_000905 PF05127 Helicase D172_000905 PF13718 GNAT acetyltransferase 2 D172_000905 PF08351 Domain of unknown function (DUF1726) D172_000910 PF13361 UvrD-like helicase C-terminal domain D172_000910 PF00580 UvrD/REP helicase N-terminal domain D172_000920 PF06062 Uncharacterised protein family (UPF0231) D172_000925 PF00692 dUTPase D172_000940 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) D172_000945 PF13419 Haloacid dehalogenase-like hydrolase D172_000950 PF00293 NUDIX domain D172_000955 PF00459 Inositol monophosphatase family D172_000975 PF03458 UPF0126 domain D172_000980 PF13335 Magnesium chelatase, subunit ChlI C-terminal D172_000980 PF01078 Magnesium chelatase, subunit ChlI D172_000985 PF00486 Transcriptional regulatory protein, C terminal D172_000985 PF00072 Response regulator receiver domain D172_000995 PF00571 CBS domain D172_000995 PF01595 Cyclin M transmembrane N-terminal domain D172_001000 PF00563 EAL domain D172_001000 PF00990 Diguanylate cyclase, GGDEF domain D172_001000 PF03707 Bacterial signalling protein N terminal repeat D172_001010 PF01584 CheW-like domain D172_001010 PF00072 Response regulator receiver domain D172_001060 PF00203 Ribosomal protein S19 D172_001095 PF04231 Endonuclease I D172_001100 PF00258 Flavodoxin D172_001100 PF00667 FAD binding domain D172_001100 PF00175 Oxidoreductase NAD-binding domain D172_001110 PF01507 Phosphoadenosine phosphosulfate reductase family D172_001120 PF00694 Aconitase C-terminal domain D172_001120 PF00330 Aconitase family (aconitate hydratase) D172_001145 PF00158 Sigma-54 interaction domain D172_001145 PF02954 Bacterial regulatory protein, Fis family D172_001145 PF00072 Response regulator receiver domain D172_001150 PF00989 PAS fold D172_001150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_001150 PF00512 His Kinase A (phospho-acceptor) domain D172_001160 PF03951 Glutamine synthetase, beta-Grasp domain D172_001160 PF00120 Glutamine synthetase, catalytic domain D172_001180 PF06452 Carbohydrate family 9 binding domain-like D172_001180 PF02018 Carbohydrate binding domain D172_001180 PF00331 Glycosyl hydrolase family 10 D172_001210 PF09500 Putative thioesterase (yiiD_Cterm) D172_001210 PF00583 Acetyltransferase (GNAT) family D172_001215 PF02253 Phospholipase A1 D172_001225 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D172_001225 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D172_001235 PF00701 Dihydrodipicolinate synthetase family D172_001250 PF00691 OmpA family D172_001265 PF00929 Exonuclease D172_001270 PF00330 Aconitase family (aconitate hydratase) D172_001270 PF11791 Aconitate B N-terminal domain D172_001270 PF06434 Aconitate hydratase 2 N-terminus D172_001280 PF00266 Aminotransferase class-V D172_001315 PF01263 Aldose 1-epimerase D172_001335 PF00474 Sodium:solute symporter family D172_001340 PF16874 Glycosyl hydrolase family 36 C-terminal domain D172_001340 PF16875 Glycosyl hydrolase family 36 N-terminal domain D172_001345 PF00392 Bacterial regulatory proteins, gntR family D172_001345 PF07729 FCD domain D172_001355 PF05035 2-keto-3-deoxy-galactonokinase D172_001360 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D172_001360 PF01266 FAD dependent oxidoreductase D172_001365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D172_001365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D172_001375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D172_001375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D172_001380 PF08544 GHMP kinases C terminal D172_001380 PF10509 Galactokinase galactose-binding signature D172_001380 PF00288 GHMP kinases N terminal domain D172_001385 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D172_001385 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D172_001390 PF16363 GDP-mannose 4,6 dehydratase D172_001395 PF00106 short chain dehydrogenase D172_001405 PF00117 Glutamine amidotransferase class-I D172_001415 PF00202 Aminotransferase class-III D172_001420 PF04958 Arginine N-succinyltransferase beta subunit D172_001435 PF02566 OsmC-like protein D172_001450 PF03222 Tryptophan/tyrosine permease family D172_001455 PF00873 AcrB/AcrD/AcrF family D172_001460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D172_001465 PF04227 Indigoidine synthase A like protein D172_001470 PF13193 AMP-binding enzyme C-terminal domain D172_001470 PF00668 Condensation domain D172_001470 PF00550 Phosphopantetheine attachment site D172_001470 PF00501 AMP-binding enzyme D172_001475 PF01047 MarR family D172_001480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D172_001485 PF00892 EamA-like transporter family D172_001495 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D172_001505 PF00561 alpha/beta hydrolase fold D172_001505 PF08386 TAP-like protein D172_001515 PF00665 Integrase core domain D172_001515 PF13333 Integrase core domain D172_001515 PF13276 HTH-like domain D172_001520 PF01527 Transposase D172_001535 PF00459 Inositol monophosphatase family D172_001545 PF03600 Citrate transporter D172_001545 PF02080 TrkA-C domain D172_001550 PF00009 Elongation factor Tu GTP binding domain D172_001565 PF01791 DeoC/LacD family aldolase D172_001590 PF00584 SecE/Sec61-gamma subunits of protein translocation complex D172_001595 PF02357 Transcription termination factor nusG D172_001595 PF00467 KOW motif D172_001650 PF03853 YjeF-related protein N-terminus D172_001650 PF01256 Carbohydrate kinase D172_001655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D172_001680 PF04186 FxsA cytoplasmic membrane protein D172_001685 PF03091 CutA1 divalent ion tolerance protein D172_001690 PF02683 Cytochrome C biogenesis protein transmembrane region D172_001690 PF11412 Disulphide bond corrector protein DsbC D172_001700 PF00364 Biotin-requiring enzyme D172_001705 PF02785 Biotin carboxylase C-terminal domain D172_001705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D172_001705 PF00289 Biotin carboxylase, N-terminal domain D172_001710 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D172_001715 PF01520 N-acetylmuramoyl-L-alanine amidase D172_001735 PF16360 GTP-binding GTPase Middle Region D172_001735 PF13167 GTP-binding GTPase N-terminal D172_001735 PF01926 50S ribosome-binding GTPase D172_001740 PF01145 SPFH domain / Band 7 family D172_001740 PF12221 Bacterial membrane protein N terminal D172_001745 PF01145 SPFH domain / Band 7 family D172_001755 PF08238 Sel1 repeat D172_001775 PF00563 EAL domain D172_001775 PF00990 Diguanylate cyclase, GGDEF domain D172_001775 PF03707 Bacterial signalling protein N terminal repeat D172_001780 PF00072 Response regulator receiver domain D172_001780 PF00512 His Kinase A (phospho-acceptor) domain D172_001780 PF00672 HAMP domain D172_001780 PF01627 Hpt domain D172_001780 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D172_001780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_001815 PF00034 Cytochrome c D172_001820 PF00596 Class II Aldolase and Adducin N-terminal domain D172_001825 PF13378 Enolase C-terminal domain-like D172_001825 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D172_001835 PF00069 Protein kinase domain D172_001855 PF04909 Amidohydrolase D172_001865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D172_001870 PF01476 LysM domain D172_001870 PF01464 Transglycosylase SLT domain D172_001885 PF06005 Cell division protein ZapB D172_001890 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D172_001895 PF08274 PhnA Zinc-Ribbon D172_001895 PF03831 PhnA domain D172_001900 PF00563 EAL domain D172_001900 PF08668 HDOD domain D172_001925 PF00873 AcrB/AcrD/AcrF family D172_001935 PF02541 Ppx/GppA phosphatase family D172_001940 PF02503 Polyphosphate kinase middle domain D172_001940 PF13089 Polyphosphate kinase N-terminal domain D172_001940 PF13090 Polyphosphate kinase C-terminal domain 2 D172_001940 PF17941 Polyphosphate kinase C-terminal domain 1 D172_001950 PF00528 Binding-protein-dependent transport system inner membrane component D172_001955 PF00528 Binding-protein-dependent transport system inner membrane component D172_001965 PF01895 PhoU domain D172_001970 PF01865 Protein of unknown function DUF47 D172_001975 PF01384 Phosphate transporter family D172_001980 PF03466 LysR substrate binding domain D172_001980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_001990 PF00990 Diguanylate cyclase, GGDEF domain D172_001990 PF08448 PAS fold D172_001990 PF00563 EAL domain D172_002005 PF02699 Preprotein translocase subunit D172_002010 PF07549 SecD/SecF GG Motif D172_002010 PF13721 SecD export protein N-terminal TM region D172_002010 PF02355 Protein export membrane protein D172_002015 PF02355 Protein export membrane protein D172_002015 PF07549 SecD/SecF GG Motif D172_002020 PF03707 Bacterial signalling protein N terminal repeat D172_002020 PF00990 Diguanylate cyclase, GGDEF domain D172_002020 PF00563 EAL domain D172_002030 PF00459 Inositol monophosphatase family D172_002045 PF04972 BON domain D172_002080 PF00196 Bacterial regulatory proteins, luxR family D172_002080 PF00563 EAL domain D172_002100 PF01810 LysE type translocator D172_002115 PF00850 Histone deacetylase domain D172_002130 PF00563 EAL domain D172_002130 PF00990 Diguanylate cyclase, GGDEF domain D172_002130 PF08448 PAS fold D172_002130 PF08447 PAS fold D172_002135 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D172_002135 PF02844 Phosphoribosylglycinamide synthetase, N domain D172_002135 PF02843 Phosphoribosylglycinamide synthetase, C domain D172_002150 PF02954 Bacterial regulatory protein, Fis family D172_002155 PF01207 Dihydrouridine synthase (Dus) D172_002165 PF03979 Sigma-70 factor, region 1.1 D172_002165 PF04546 Sigma-70, non-essential region D172_002165 PF04542 Sigma-70 region 2 D172_002165 PF04545 Sigma-70, region 4 D172_002165 PF04539 Sigma-70 region 3 D172_002165 PF00140 Sigma-70 factor, region 1.2 D172_002170 PF10410 DnaB-helicase binding domain of primase D172_002170 PF08278 DNA primase DnaG DnaB-binding D172_002170 PF08275 DNA primase catalytic core, N-terminal domain D172_002170 PF01807 CHC2 zinc finger D172_002190 PF02881 SRP54-type protein, helical bundle domain D172_002190 PF00448 SRP54-type protein, GTPase domain D172_002195 PF00005 ABC transporter D172_002200 PF18075 FtsX extracellular domain D172_002205 PF04545 Sigma-70, region 4 D172_002205 PF04542 Sigma-70 region 2 D172_002205 PF00140 Sigma-70 factor, region 1.2 D172_002215 PF13180 PDZ domain D172_002215 PF03572 Peptidase family S41 D172_002220 PF01551 Peptidase family M23 D172_002230 PF00581 Rhodanese-like domain D172_002235 PF00462 Glutaredoxin D172_002250 PF00672 HAMP domain D172_002250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_002265 PF00588 SpoU rRNA Methylase family D172_002270 PF16916 Dimerisation domain of Zinc Transporter D172_002270 PF01545 Cation efflux family D172_002275 PF12146 Serine aminopeptidase, S33 D172_002280 PF16527 Two-component sensor protein CpxA, periplasmic domain D172_002280 PF00672 HAMP domain D172_002280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_002280 PF00512 His Kinase A (phospho-acceptor) domain D172_002285 PF00486 Transcriptional regulatory protein, C terminal D172_002285 PF00072 Response regulator receiver domain D172_002300 PF00437 Type II/IV secretion system protein D172_002300 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D172_002310 PF06750 Bacterial Peptidase A24 N-terminal domain D172_002310 PF01478 Type IV leader peptidase family D172_002315 PF00482 Type II secretion system (T2SS), protein F D172_002325 PF07963 Prokaryotic N-terminal methylation motif D172_002325 PF00114 Pilin (bacterial filament) D172_002330 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D172_002330 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D172_002335 PF01510 N-acetylmuramoyl-L-alanine amidase D172_002340 PF03186 CobD/Cbib protein D172_002345 PF00392 Bacterial regulatory proteins, gntR family D172_002345 PF07729 FCD domain D172_002350 PF17831 Pyruvate dehydrogenase E1 component middle domain D172_002350 PF00456 Transketolase, thiamine diphosphate binding domain D172_002355 PF00364 Biotin-requiring enzyme D172_002355 PF02817 e3 binding domain D172_002355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D172_002360 PF07992 Pyridine nucleotide-disulphide oxidoreductase D172_002360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D172_002375 PF13416 Bacterial extracellular solute-binding protein D172_002385 PF08402 TOBE domain D172_002385 PF00005 ABC transporter D172_002395 PF01316 Arginine repressor, DNA binding domain D172_002395 PF02863 Arginine repressor, C-terminal domain D172_002405 PF00348 Polyprenyl synthetase D172_002425 PF00186 Dihydrofolate reductase D172_002435 PF07676 WD40-like Beta Propeller Repeat D172_002435 PF00326 Prolyl oligopeptidase family D172_002440 PF00440 Bacterial regulatory proteins, tetR family D172_002445 PF02441 Flavoprotein D172_002445 PF04127 DNA / pantothenate metabolism flavoprotein D172_002455 PF00830 Ribosomal L28 family D172_002465 PF00082 Subtilase family D172_002465 PF04151 Bacterial pre-peptidase C-terminal domain D172_002475 PF02311 AraC-like ligand binding domain D172_002475 PF12833 Helix-turn-helix domain D172_002480 PF00892 EamA-like transporter family D172_002495 PF00294 pfkB family carbohydrate kinase D172_002505 PF07715 TonB-dependent Receptor Plug Domain D172_002505 PF00593 TonB dependent receptor D172_002510 PF00474 Sodium:solute symporter family D172_002515 PF13660 Domain of unknown function (DUF4147) D172_002515 PF05161 MOFRL family D172_002525 PF01368 DHH family D172_002525 PF02833 DHHA2 domain D172_002535 PF06827 Zinc finger found in FPG and IleRS D172_002535 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D172_002535 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D172_002540 PF00672 HAMP domain D172_002540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_002545 PF00149 Calcineurin-like phosphoesterase D172_002550 PF04379 ApaG domain D172_002575 PF01636 Phosphotransferase enzyme family D172_002580 PF00483 Nucleotidyl transferase D172_002585 PF05099 Tellurite resistance protein TerB D172_002585 PF00226 DnaJ domain D172_002595 PF00849 RNA pseudouridylate synthase D172_002600 PF18339 RapA N-terminal Tudor like domain 1 D172_002600 PF18337 RapA N-terminal Tudor like domain D172_002600 PF00176 SNF2 family N-terminal domain D172_002600 PF12137 RNA polymerase recycling family C-terminal D172_002600 PF00271 Helicase conserved C-terminal domain D172_002605 PF13638 PIN domain D172_002605 PF02562 PhoH-like protein D172_002610 PF00672 HAMP domain D172_002610 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D172_002610 PF00072 Response regulator receiver domain D172_002610 PF01627 Hpt domain D172_002610 PF00512 His Kinase A (phospho-acceptor) domain D172_002610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_002615 PF00072 Response regulator receiver domain D172_002625 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D172_002625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D172_002635 PF06945 Protein of unknown function (DUF1289) D172_002650 PF00990 Diguanylate cyclase, GGDEF domain D172_002650 PF03707 Bacterial signalling protein N terminal repeat D172_002650 PF00563 EAL domain D172_002655 PF00520 Ion transport protein D172_002655 PF00027 Cyclic nucleotide-binding domain D172_002660 PF13380 CoA binding domain D172_002660 PF00583 Acetyltransferase (GNAT) family D172_002660 PF13607 Succinyl-CoA ligase like flavodoxin domain D172_002680 PF06969 HemN C-terminal domain D172_002680 PF04055 Radical SAM superfamily D172_002685 PF01725 Ham1 family D172_002695 PF02325 YGGT family D172_002700 PF03807 NADP oxidoreductase coenzyme F420-dependent D172_002700 PF14748 Pyrroline-5-carboxylate reductase dimerisation D172_002705 PF01168 Alanine racemase, N-terminal domain D172_002710 PF00437 Type II/IV secretion system protein D172_002715 PF00437 Type II/IV secretion system protein D172_002730 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D172_002730 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D172_002735 PF04452 RNA methyltransferase D172_002750 PF08335 GlnD PII-uridylyltransferase D172_002750 PF03710 Glutamate-ammonia ligase adenylyltransferase D172_002760 PF03279 Bacterial lipid A biosynthesis acyltransferase D172_002765 PF02321 Outer membrane efflux protein D172_002770 PF00293 NUDIX domain D172_002775 PF06853 Protein of unknown function (DUF1249) D172_002780 PF00149 Calcineurin-like phosphoesterase D172_002785 PF05728 Uncharacterised protein family (UPF0227) D172_002790 PF00204 DNA gyrase B D172_002790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_002790 PF00986 DNA gyrase B subunit, carboxyl terminus D172_002790 PF01751 Toprim domain D172_002795 PF07995 Glucose / Sorbosone dehydrogenase D172_002800 PF03989 DNA gyrase C-terminal domain, beta-propeller D172_002800 PF00521 DNA gyrase/topoisomerase IV, subunit A D172_002805 PF01553 Acyltransferase D172_002820 PF01544 CorA-like Mg2+ transporter protein D172_002825 PF18030 RimK PreATP-grasp domain D172_002825 PF08443 RimK-like ATP-grasp domain D172_002855 PF09382 RQC domain D172_002855 PF16124 RecQ zinc-binding D172_002855 PF00570 HRDC domain D172_002855 PF00271 Helicase conserved C-terminal domain D172_002855 PF00270 DEAD/DEAH box helicase D172_002860 PF03061 Thioesterase superfamily D172_002865 PF00892 EamA-like transporter family D172_002870 PF00990 Diguanylate cyclase, GGDEF domain D172_002870 PF00072 Response regulator receiver domain D172_002875 PF04219 Protein of unknown function, DUF D172_002880 PF03466 LysR substrate binding domain D172_002880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_002885 PF00267 Gram-negative porin D172_002890 PF00005 ABC transporter D172_002895 PF01032 FecCD transport family D172_002905 PF12557 Cob(I)alamin adenosyltransferase N terminal D172_002905 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP D172_002910 PF01497 Periplasmic binding protein D172_002925 PF00923 Transaldolase/Fructose-6-phosphate aldolase D172_002935 PF00924 Mechanosensitive ion channel D172_002950 PF00271 Helicase conserved C-terminal domain D172_002950 PF00270 DEAD/DEAH box helicase D172_002960 PF02806 Alpha amylase, C-terminal all-beta domain D172_002960 PF00128 Alpha amylase, catalytic domain D172_002970 PF00258 Flavodoxin D172_002975 PF02899 Phage integrase, N-terminal SAM-like domain D172_002975 PF00589 Phage integrase family D172_002980 PF10411 Disulfide bond isomerase protein N-terminus D172_002980 PF13098 Thioredoxin-like domain D172_002985 PF17768 RecJ OB domain D172_002985 PF02272 DHHA1 domain D172_002985 PF01368 DHH family D172_002995 PF00152 tRNA synthetases class II (D, K and N) D172_002995 PF01336 OB-fold nucleic acid binding domain D172_003030 PF07075 Protein of unknown function (DUF1343) D172_003035 PF00144 Beta-lactamase D172_003040 PF03553 Na+/H+ antiporter family D172_003080 PF01451 Low molecular weight phosphotyrosine protein phosphatase D172_003100 PF04055 Radical SAM superfamily D172_003115 PF07715 TonB-dependent Receptor Plug Domain D172_003135 PF01266 FAD dependent oxidoreductase D172_003150 PF02581 Thiamine monophosphate synthase D172_003155 PF00899 ThiF family D172_003165 PF03193 RsgA GTPase D172_003190 PF01894 Uncharacterised protein family UPF0047 D172_003200 PF01475 Ferric uptake regulator family D172_003205 PF01914 MarC family integral membrane protein D172_003240 PF01527 Transposase D172_003245 PF00665 Integrase core domain D172_003255 PF17837 4'-phosphopantetheinyl transferase N-terminal domain D172_003255 PF01648 4'-phosphopantetheinyl transferase superfamily D172_003260 PF13276 HTH-like domain D172_003260 PF00665 Integrase core domain D172_003260 PF13333 Integrase core domain D172_003275 PF00975 Thioesterase domain D172_003275 PF00550 Phosphopantetheine attachment site D172_003275 PF00668 Condensation domain D172_003275 PF13193 AMP-binding enzyme C-terminal domain D172_003275 PF00501 AMP-binding enzyme D172_003280 PF00501 AMP-binding enzyme D172_003280 PF13193 AMP-binding enzyme C-terminal domain D172_003280 PF00668 Condensation domain D172_003280 PF00550 Phosphopantetheine attachment site D172_003280 PF00975 Thioesterase domain D172_003290 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D172_003290 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D172_003300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D172_003305 PF00005 ABC transporter D172_003310 PF02687 FtsX-like permease family D172_003310 PF12704 MacB-like periplasmic core domain D172_003315 PF01527 Transposase D172_003320 PF13276 HTH-like domain D172_003320 PF13333 Integrase core domain D172_003320 PF00665 Integrase core domain D172_003330 PF01207 Dihydrouridine synthase (Dus) D172_003335 PF04012 PspA/IM30 family D172_003375 PF00990 Diguanylate cyclase, GGDEF domain D172_003375 PF03707 Bacterial signalling protein N terminal repeat D172_003375 PF00563 EAL domain D172_003380 PF04055 Radical SAM superfamily D172_003380 PF11842 Domain of unknown function (DUF3362) D172_003380 PF08497 Radical SAM N-terminal D172_003385 PF00578 AhpC/TSA family D172_003390 PF03448 MgtE intracellular N domain D172_003390 PF01769 Divalent cation transporter D172_003390 PF00571 CBS domain D172_003395 PF00381 PTS HPr component phosphorylation site D172_003405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 D172_003410 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D172_003415 PF00309 Sigma-54 factor, Activator interacting domain (AID) D172_003415 PF04963 Sigma-54 factor, core binding domain D172_003415 PF04552 Sigma-54, DNA binding domain D172_003420 PF00005 ABC transporter D172_003420 PF12399 Branched-chain amino acid ATP-binding cassette transporter D172_003440 PF00571 CBS domain D172_003440 PF01380 SIS domain D172_003445 PF01699 Sodium/calcium exchanger protein D172_003450 PF00005 ABC transporter D172_003455 PF02405 Permease MlaE D172_003460 PF02470 MlaD protein D172_003465 PF05494 MlaC protein D172_003470 PF13466 STAS domain D172_003475 PF01722 BolA-like protein D172_003485 PF13180 PDZ domain D172_003490 PF00595 PDZ domain D172_003490 PF13180 PDZ domain D172_003500 PF03969 AFG1-like ATPase D172_003510 PF00380 Ribosomal protein S9/S16 D172_003515 PF00355 Rieske [2Fe-2S] domain D172_003515 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D172_003520 PF00033 Cytochrome b/b6/petB D172_003520 PF00032 Cytochrome b(C-terminal)/b6/petD D172_003525 PF02167 Cytochrome C1 family D172_003530 PF02798 Glutathione S-transferase, N-terminal domain D172_003530 PF00043 Glutathione S-transferase, C-terminal domain D172_003535 PF04386 Stringent starvation protein B D172_003540 PF04972 BON domain D172_003545 PF13580 SIS domain D172_003555 PF04348 LppC putative lipoprotein D172_003560 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D172_003575 PF00580 UvrD/REP helicase N-terminal domain D172_003575 PF13361 UvrD-like helicase C-terminal domain D172_003595 PF04277 Oxaloacetate decarboxylase, gamma chain D172_003600 PF00364 Biotin-requiring enzyme D172_003600 PF00682 HMGL-like D172_003600 PF02436 Conserved carboxylase domain D172_003605 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit D172_003610 PF00248 Aldo/keto reductase family D172_003645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_003645 PF00512 His Kinase A (phospho-acceptor) domain D172_003645 PF18415 Histidine kinase receptor ArcB trans-membrane domain D172_003645 PF01627 Hpt domain D172_003645 PF00989 PAS fold D172_003645 PF00072 Response regulator receiver domain D172_003650 PF00072 Response regulator receiver domain D172_003650 PF00486 Transcriptional regulatory protein, C terminal D172_003655 PF00512 His Kinase A (phospho-acceptor) domain D172_003655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_003655 PF00497 Bacterial extracellular solute-binding proteins, family 3 D172_003680 PF01627 Hpt domain D172_003680 PF00072 Response regulator receiver domain D172_003680 PF00512 His Kinase A (phospho-acceptor) domain D172_003680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_003680 PF00672 HAMP domain D172_003680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D172_003715 PF02321 Outer membrane efflux protein D172_003720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D172_003725 PF00873 AcrB/AcrD/AcrF family D172_003730 PF03695 Uncharacterised protein family (UPF0149) D172_003735 PF05195 Aminopeptidase P, N-terminal domain D172_003735 PF00557 Metallopeptidase family M24 D172_003740 PF01494 FAD binding domain D172_003745 PF01494 FAD binding domain D172_003750 PF00378 Enoyl-CoA hydratase/isomerase D172_003755 PF17876 Cold shock domain D172_003755 PF08461 Ribonuclease R winged-helix domain D172_003755 PF08206 Ribonuclease B OB domain D172_003755 PF00773 RNB domain D172_003755 PF00575 S1 RNA binding domain D172_003760 PF00588 SpoU rRNA Methylase family D172_003760 PF08032 RNA 2'-O ribose methyltransferase substrate binding D172_003765 PF07715 TonB-dependent Receptor Plug Domain D172_003770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_003770 PF03466 LysR substrate binding domain D172_003860 PF04336 Acyl carrier protein phosphodiesterase D172_003870 PF01844 HNH endonuclease D172_003875 PF00072 Response regulator receiver domain D172_003875 PF09308 LuxQ, periplasmic D172_003875 PF00512 His Kinase A (phospho-acceptor) domain D172_003875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_003880 PF05643 Putative bacterial lipoprotein (DUF799) D172_003890 PF03783 Curli production assembly/transport component CsgG D172_003900 PF02798 Glutathione S-transferase, N-terminal domain D172_003900 PF00043 Glutathione S-transferase, C-terminal domain D172_003915 PF00436 Single-strand binding protein family D172_003930 PF08281 Sigma-70, region 4 D172_003930 PF04542 Sigma-70 region 2 D172_003945 PF03796 DnaB-like helicase C terminal domain D172_003945 PF00772 DnaB-like helicase N terminal domain D172_003970 PF01636 Phosphotransferase enzyme family D172_003985 PF01966 HD domain D172_003985 PF11871 Domain of unknown function (DUF3391) D172_003995 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D172_004005 PF04364 DNA polymerase III chi subunit, HolC D172_004010 PF02789 Cytosol aminopeptidase family, N-terminal domain D172_004010 PF00883 Cytosol aminopeptidase family, catalytic domain D172_004015 PF03739 Lipopolysaccharide export system permease LptF/LptG D172_004020 PF03739 Lipopolysaccharide export system permease LptF/LptG D172_004045 PF01546 Peptidase family M20/M25/M40 D172_004045 PF07687 Peptidase dimerisation domain D172_004060 PF07690 Major Facilitator Superfamily D172_004065 PF02311 AraC-like ligand binding domain D172_004065 PF12833 Helix-turn-helix domain D172_004070 PF00593 TonB dependent receptor D172_004070 PF07715 TonB-dependent Receptor Plug Domain D172_004110 PF00171 Aldehyde dehydrogenase family D172_004115 PF03060 Nitronate monooxygenase D172_004120 PF00300 Histidine phosphatase superfamily (branch 1) D172_004120 PF00293 NUDIX domain D172_004125 PF00158 Sigma-54 interaction domain D172_004125 PF00072 Response regulator receiver domain D172_004125 PF02954 Bacterial regulatory protein, Fis family D172_004135 PF01590 GAF domain D172_004135 PF00512 His Kinase A (phospho-acceptor) domain D172_004135 PF08446 PAS fold D172_004135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_004135 PF00360 Phytochrome region D172_004140 PF00072 Response regulator receiver domain D172_004145 PF00072 Response regulator receiver domain D172_004145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_004145 PF09308 LuxQ, periplasmic D172_004145 PF00512 His Kinase A (phospho-acceptor) domain D172_004150 PF01557 Fumarylacetoacetate (FAA) hydrolase family D172_004155 PF00248 Aldo/keto reductase family D172_004170 PF00883 Cytosol aminopeptidase family, catalytic domain D172_004170 PF02789 Cytosol aminopeptidase family, N-terminal domain D172_004175 PF17200 Single Cache domain 2 D172_004175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_004175 PF00672 HAMP domain D172_004180 PF00326 Prolyl oligopeptidase family D172_004180 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region D172_004210 PF07969 Amidohydrolase family D172_004235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_004235 PF00512 His Kinase A (phospho-acceptor) domain D172_004245 PF00072 Response regulator receiver domain D172_004245 PF00158 Sigma-54 interaction domain D172_004255 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain D172_004255 PF01464 Transglycosylase SLT domain D172_004270 PF12627 Probable RNA and SrmB- binding site of polymerase A D172_004270 PF01743 Poly A polymerase head domain D172_004270 PF01966 HD domain D172_004275 PF13755 Sensor N-terminal transmembrane domain D172_004275 PF13756 Stimulus-sensing domain D172_004275 PF00512 His Kinase A (phospho-acceptor) domain D172_004275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_004275 PF00672 HAMP domain D172_004280 PF00072 Response regulator receiver domain D172_004280 PF00486 Transcriptional regulatory protein, C terminal D172_004295 PF00892 EamA-like transporter family D172_004335 PF02371 Transposase IS116/IS110/IS902 family D172_004335 PF01548 Transposase D172_004350 PF00144 Beta-lactamase D172_004355 PF00665 Integrase core domain D172_004360 PF01527 Transposase D172_004370 PF03781 Sulfatase-modifying factor enzyme 1 D172_004375 PF00486 Transcriptional regulatory protein, C terminal D172_004375 PF00072 Response regulator receiver domain D172_004385 PF00144 Beta-lactamase D172_004395 PF00270 DEAD/DEAH box helicase D172_004395 PF00271 Helicase conserved C-terminal domain D172_004400 PF00990 Diguanylate cyclase, GGDEF domain D172_004400 PF13185 GAF domain D172_004410 PF05193 Peptidase M16 inactive domain D172_004410 PF00675 Insulinase (Peptidase family M16) D172_004415 PF06426 Serine acetyltransferase, N-terminal D172_004415 PF00132 Bacterial transferase hexapeptide (six repeats) D172_004430 PF00571 CBS domain D172_004430 PF00478 IMP dehydrogenase / GMP reductase domain D172_004455 PF00072 Response regulator receiver domain D172_004455 PF09308 LuxQ, periplasmic D172_004455 PF00512 His Kinase A (phospho-acceptor) domain D172_004455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_004475 PF01026 TatD related DNase D172_004485 PF18429 Domain of unknown function (DUF5609) D172_004495 PF18073 Rubredoxin metal binding domain D172_004505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D172_004505 PF01842 ACT domain D172_004505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D172_004510 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D172_004515 PF01812 5-formyltetrahydrofolate cyclo-ligase family D172_004530 PF00456 Transketolase, thiamine diphosphate binding domain D172_004530 PF02780 Transketolase, C-terminal domain D172_004530 PF02779 Transketolase, pyrimidine binding domain D172_004555 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D172_004565 PF00583 Acetyltransferase (GNAT) family D172_004585 PF00158 Sigma-54 interaction domain D172_004585 PF18024 Helix-turn-helix domain D172_004635 PF09335 SNARE associated Golgi protein D172_004640 PF01476 LysM domain D172_004640 PF01551 Peptidase family M23 D172_004645 PF00140 Sigma-70 factor, region 1.2 D172_004645 PF04542 Sigma-70 region 2 D172_004645 PF04539 Sigma-70 region 3 D172_004645 PF04545 Sigma-70, region 4 D172_004655 PF02464 Competence-damaged protein D172_004660 PF00154 recA bacterial DNA recombination protein D172_004665 PF07715 TonB-dependent Receptor Plug Domain D172_004665 PF07660 Secretin and TonB N terminus short domain D172_004665 PF00593 TonB dependent receptor D172_004680 PF00072 Response regulator receiver domain D172_004680 PF00196 Bacterial regulatory proteins, luxR family D172_004685 PF00551 Formyl transferase D172_004685 PF01842 ACT domain D172_004720 PF13439 Glycosyltransferase Family 4 D172_004720 PF00534 Glycosyl transferases group 1 D172_004750 PF00672 HAMP domain D172_004750 PF17200 Single Cache domain 2 D172_004750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_004765 PF01769 Divalent cation transporter D172_004765 PF03448 MgtE intracellular N domain D172_004765 PF00571 CBS domain D172_004780 PF01928 CYTH domain D172_004795 PF01627 Hpt domain D172_004795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_004795 PF00497 Bacterial extracellular solute-binding proteins, family 3 D172_004795 PF00072 Response regulator receiver domain D172_004795 PF00512 His Kinase A (phospho-acceptor) domain D172_004805 PF17158 Membrane-associated sensor, integral membrane domain D172_004805 PF00990 Diguanylate cyclase, GGDEF domain D172_004810 PF00543 Nitrogen regulatory protein P-II D172_004815 PF00909 Ammonium Transporter Family D172_004820 PF00912 Transglycosylase D172_004820 PF00905 Penicillin binding protein transpeptidase domain D172_004820 PF14814 Bifunctional transglycosylase second domain D172_004825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_004825 PF00672 HAMP domain D172_004825 PF12729 Four helix bundle sensory module for signal transduction D172_004835 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D172_004835 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D172_004845 PF00654 Voltage gated chloride channel D172_004850 PF02868 Thermolysin metallopeptidase, alpha-helical domain D172_004850 PF04151 Bacterial pre-peptidase C-terminal domain D172_004850 PF01447 Thermolysin metallopeptidase, catalytic domain D172_004850 PF07504 Fungalysin/Thermolysin Propeptide Motif D172_004850 PF03413 Peptidase propeptide and YPEB domain D172_004870 PF07690 Major Facilitator Superfamily D172_004875 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D172_004895 PF01722 BolA-like protein D172_004910 PF03116 NQR2, RnfD, RnfE family D172_004915 PF04205 FMN-binding domain D172_004930 PF00175 Oxidoreductase NAD-binding domain D172_004930 PF00111 2Fe-2S iron-sulfur cluster binding domain D172_004930 PF00970 Oxidoreductase FAD-binding domain D172_004935 PF02424 ApbE family D172_004940 PF04400 (Na+)-NQR maturation NqrM D172_004950 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D172_004950 PF06481 COX Aromatic Rich Motif D172_004955 PF00115 Cytochrome C and Quinol oxidase polypeptide I D172_004960 PF00510 Cytochrome c oxidase subunit III D172_004965 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D172_004990 PF00155 Aminotransferase class I and II D172_005000 PF02333 Phytase D172_005005 PF00990 Diguanylate cyclase, GGDEF domain D172_005005 PF00072 Response regulator receiver domain D172_005020 PF00850 Histone deacetylase domain D172_005025 PF07238 PilZ domain D172_005030 PF00005 ABC transporter D172_005030 PF12848 ABC transporter D172_005040 PF02574 Homocysteine S-methyltransferase D172_005040 PF00809 Pterin binding enzyme D172_005040 PF02965 Vitamin B12 dependent methionine synthase, activation domain D172_005040 PF02607 B12 binding domain D172_005040 PF02310 B12 binding domain D172_005045 PF02310 B12 binding domain D172_005045 PF02607 B12 binding domain D172_005045 PF02574 Homocysteine S-methyltransferase D172_005045 PF02965 Vitamin B12 dependent methionine synthase, activation domain D172_005045 PF00809 Pterin binding enzyme D172_005065 PF01799 [2Fe-2S] binding domain D172_005065 PF00111 2Fe-2S iron-sulfur cluster binding domain D172_005070 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D172_005075 PF05532 CsbD-like D172_005080 PF04408 Helicase associated domain (HA2) D172_005080 PF08482 ATP-dependent helicase C-terminal D172_005080 PF00271 Helicase conserved C-terminal domain D172_005080 PF00270 DEAD/DEAH box helicase D172_005105 PF00512 His Kinase A (phospho-acceptor) domain D172_005105 PF08448 PAS fold D172_005105 PF00072 Response regulator receiver domain D172_005105 PF13188 PAS domain D172_005105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_005130 PF00107 Zinc-binding dehydrogenase D172_005130 PF08240 Alcohol dehydrogenase GroES-like domain D172_005135 PF07690 Major Facilitator Superfamily D172_005140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_005140 PF08447 PAS fold D172_005140 PF13426 PAS domain D172_005175 PF00875 DNA photolyase D172_005175 PF03441 FAD binding domain of DNA photolyase D172_005180 PF01613 Flavin reductase like domain D172_005195 PF00512 His Kinase A (phospho-acceptor) domain D172_005195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_005195 PF00672 HAMP domain D172_005200 PF00486 Transcriptional regulatory protein, C terminal D172_005200 PF00072 Response regulator receiver domain D172_005225 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D172_005225 PF00072 Response regulator receiver domain D172_005225 PF01627 Hpt domain D172_005225 PF00512 His Kinase A (phospho-acceptor) domain D172_005225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_005225 PF00672 HAMP domain D172_005235 PF02798 Glutathione S-transferase, N-terminal domain D172_005250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_005250 PF03466 LysR substrate binding domain D172_005265 PF00892 EamA-like transporter family D172_005270 PF01432 Peptidase family M3 D172_005275 PF12795 Mechanosensitive ion channel porin domain D172_005275 PF12794 Mechanosensitive ion channel inner membrane domain 1 D172_005275 PF00924 Mechanosensitive ion channel D172_005280 PF07715 TonB-dependent Receptor Plug Domain D172_005280 PF00593 TonB dependent receptor D172_005290 PF13419 Haloacid dehalogenase-like hydrolase D172_005300 PF00012 Hsp70 protein D172_005315 PF07690 Major Facilitator Superfamily D172_005330 PF01551 Peptidase family M23 D172_005335 PF01557 Fumarylacetoacetate (FAA) hydrolase family D172_005340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D172_005350 PF00854 POT family D172_005355 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) D172_005355 PF13176 Tetratricopeptide repeat D172_005360 PF01270 Glycosyl hydrolases family 8 D172_005365 PF03170 Bacterial cellulose synthase subunit D172_005370 PF00535 Glycosyl transferase family 2 D172_005370 PF03552 Cellulose synthase D172_005370 PF07238 PilZ domain D172_005385 PF10995 Cellulose biosynthesis GIL D172_005390 PF11658 Cellulose biosynthesis protein BcsG D172_005395 PF00158 Sigma-54 interaction domain D172_005395 PF18024 Helix-turn-helix domain D172_005410 PF03922 OmpW family D172_005415 PF01546 Peptidase family M20/M25/M40 D172_005415 PF07687 Peptidase dimerisation domain D172_005425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D172_005440 PF00072 Response regulator receiver domain D172_005450 PF03023 Lipid II flippase MurJ D172_005455 PF01687 Riboflavin kinase D172_005455 PF06574 FAD synthetase D172_005470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D172_005480 PF06580 Histidine kinase D172_005480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_005485 PF04397 LytTr DNA-binding domain D172_005485 PF00072 Response regulator receiver domain D172_005510 PF07963 Prokaryotic N-terminal methylation motif D172_005510 PF00114 Pilin (bacterial filament) D172_005520 PF07963 Prokaryotic N-terminal methylation motif D172_005520 PF00114 Pilin (bacterial filament) D172_005525 PF00543 Nitrogen regulatory protein P-II D172_005530 PF13525 Outer membrane lipoprotein D172_005535 PF00849 RNA pseudouridylate synthase D172_005535 PF01479 S4 domain D172_005545 PF07724 AAA domain (Cdc48 subfamily) D172_005545 PF02861 Clp amino terminal domain, pathogenicity island component D172_005545 PF10431 C-terminal, D2-small domain, of ClpB protein D172_005545 PF00004 ATPase family associated with various cellular activities (AAA) D172_005545 PF17871 AAA lid domain D172_005550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_005550 PF08447 PAS fold D172_005565 PF01595 Cyclin M transmembrane N-terminal domain D172_005565 PF03471 Transporter associated domain D172_005565 PF00571 CBS domain D172_005570 PF01578 Cytochrome C assembly protein D172_005575 PF02978 Signal peptide binding domain D172_005575 PF00448 SRP54-type protein, GTPase domain D172_005575 PF02881 SRP54-type protein, helical bundle domain D172_005600 PF02153 Prephenate dehydrogenase D172_005600 PF01817 Chorismate mutase type II D172_005605 PF00800 Prephenate dehydratase D172_005605 PF01817 Chorismate mutase type II D172_005610 PF00990 Diguanylate cyclase, GGDEF domain D172_005610 PF03707 Bacterial signalling protein N terminal repeat D172_005610 PF00563 EAL domain D172_005615 PF01253 Translation initiation factor SUI1 D172_005625 PF00486 Transcriptional regulatory protein, C terminal D172_005625 PF00072 Response regulator receiver domain D172_005635 PF00155 Aminotransferase class I and II D172_005640 PF03222 Tryptophan/tyrosine permease family D172_005650 PF18393 MotY N-terminal domain D172_005650 PF00691 OmpA family D172_005655 PF00929 Exonuclease D172_005705 PF13460 NAD(P)H-binding D172_005715 PF02801 Beta-ketoacyl synthase, C-terminal domain D172_005715 PF00109 Beta-ketoacyl synthase, N-terminal domain D172_005725 PF04237 YjbR D172_005750 PF05373 L-proline 3-hydroxylase, C-terminal D172_005750 PF05118 Aspartyl/Asparaginyl beta-hydroxylase D172_005780 PF00082 Subtilase family D172_005780 PF04151 Bacterial pre-peptidase C-terminal domain D172_005780 PF05922 Peptidase inhibitor I9 D172_005805 PF00990 Diguanylate cyclase, GGDEF domain D172_005805 PF00563 EAL domain D172_005805 PF03707 Bacterial signalling protein N terminal repeat D172_005810 PF00675 Insulinase (Peptidase family M16) D172_005810 PF05193 Peptidase M16 inactive domain D172_005815 PF00300 Histidine phosphatase superfamily (branch 1) D172_005820 PF01042 Endoribonuclease L-PSP D172_005835 PF01713 Smr domain D172_005840 PF05175 Methyltransferase small domain D172_005875 PF04315 Elongation factor P hydroxylase D172_005885 PF08891 YfcL protein D172_005890 PF03806 AbgT putative transporter family D172_005900 PF00271 Helicase conserved C-terminal domain D172_005900 PF03880 DbpA RNA binding domain D172_005900 PF00270 DEAD/DEAH box helicase D172_005900 PF12343 Cold shock protein DEAD box A D172_005905 PF00462 Glutaredoxin D172_005910 PF00486 Transcriptional regulatory protein, C terminal D172_005910 PF00072 Response regulator receiver domain D172_005925 PF00083 Sugar (and other) transporter D172_005940 PF01527 Transposase D172_005945 PF13683 Integrase core domain D172_005945 PF13276 HTH-like domain D172_005970 PF11490 DNA polymerase III polC-type N-terminus II D172_005970 PF07733 Bacterial DNA polymerase III alpha NTPase domain D172_005970 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D172_005970 PF14579 Helix-hairpin-helix motif D172_005970 PF02811 PHP domain D172_005970 PF01336 OB-fold nucleic acid binding domain D172_005970 PF00929 Exonuclease D172_005985 PF00850 Histone deacetylase domain D172_005995 PF01925 Sulfite exporter TauE/SafE D172_006000 PF06733 DEAD_2 D172_006000 PF13307 Helicase C-terminal domain D172_006005 PF00136 DNA polymerase family B D172_006005 PF03104 DNA polymerase family B, exonuclease domain D172_006010 PF07715 TonB-dependent Receptor Plug Domain D172_006010 PF00593 TonB dependent receptor D172_006030 PF04851 Type III restriction enzyme, res subunit D172_006030 PF00271 Helicase conserved C-terminal domain D172_006040 PF17243 POTRA domain TamA domain 1 D172_006040 PF07244 Surface antigen variable number repeat D172_006040 PF01103 Surface antigen D172_006045 PF04357 TamB, inner membrane protein subunit of TAM complex D172_006065 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) D172_006095 PF04287 tRNA pseudouridine synthase C D172_006100 PF00849 RNA pseudouridylate synthase D172_006105 PF00258 Flavodoxin D172_006110 PF01464 Transglycosylase SLT domain D172_006110 PF01476 LysM domain D172_006120 PF08241 Methyltransferase domain D172_006130 PF00929 Exonuclease D172_006175 PF00486 Transcriptional regulatory protein, C terminal D172_006175 PF00072 Response regulator receiver domain D172_006180 PF16750 Sensor domain of 2-component histidine kinase D172_006180 PF00672 HAMP domain D172_006180 PF00512 His Kinase A (phospho-acceptor) domain D172_006180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_006195 PF09317 Domain of unknown function (DUF1974) D172_006195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D172_006195 PF02770 Acyl-CoA dehydrogenase, middle domain D172_006195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D172_006200 PF13230 Glutamine amidotransferases class-II D172_006210 PF00551 Formyl transferase D172_006245 PF01863 Protein of unknown function DUF45 D172_006250 PF01904 Protein of unknown function DUF72 D172_006290 PF00270 DEAD/DEAH box helicase D172_006290 PF00271 Helicase conserved C-terminal domain D172_006310 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain D172_006310 PF00293 NUDIX domain D172_006310 PF09297 NADH pyrophosphatase zinc ribbon domain D172_006315 PF01053 Cys/Met metabolism PLP-dependent enzyme D172_006325 PF00005 ABC transporter D172_006330 PF08000 Bacterial PH domain D172_006340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D172_006340 PF02770 Acyl-CoA dehydrogenase, middle domain D172_006340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D172_006340 PF09317 Domain of unknown function (DUF1974) D172_006350 PF00291 Pyridoxal-phosphate dependent enzyme D172_006355 PF00375 Sodium:dicarboxylate symporter family D172_006360 PF00072 Response regulator receiver domain D172_006360 PF00196 Bacterial regulatory proteins, luxR family D172_006370 PF01066 CDP-alcohol phosphatidyltransferase D172_006415 PF01235 Sodium:alanine symporter family D172_006440 PF00308 Bacterial dnaA protein D172_006445 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D172_006445 PF01409 tRNA synthetases class II core domain (F) D172_006465 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D172_006465 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D172_006470 PF18027 Cytosolic carboxypeptidase N-terminal domain D172_006470 PF00246 Zinc carboxypeptidase D172_006475 PF01235 Sodium:alanine symporter family D172_006485 PF07023 Protein of unknown function (DUF1315) D172_006500 PF03109 ABC1 family D172_006505 PF02954 Bacterial regulatory protein, Fis family D172_006505 PF00158 Sigma-54 interaction domain D172_006505 PF01590 GAF domain D172_006510 PF13746 4Fe-4S dicluster domain D172_006510 PF12801 4Fe-4S binding domain D172_006510 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase D172_006525 PF13361 UvrD-like helicase C-terminal domain D172_006525 PF12462 DNA helicase IV / RNA helicase N terminal D172_006525 PF00580 UvrD/REP helicase N-terminal domain D172_006530 PF03707 Bacterial signalling protein N terminal repeat D172_006530 PF00990 Diguanylate cyclase, GGDEF domain D172_006530 PF00563 EAL domain D172_006535 PF03575 Peptidase family S51 D172_006545 PF02743 Cache domain D172_006545 PF00672 HAMP domain D172_006545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_006565 PF13276 HTH-like domain D172_006565 PF13683 Integrase core domain D172_006570 PF01527 Transposase D172_006600 PF00665 Integrase core domain D172_006600 PF13333 Integrase core domain D172_006600 PF13276 HTH-like domain D172_006605 PF01527 Transposase D172_006620 PF13472 GDSL-like Lipase/Acylhydrolase family D172_006625 PF00005 ABC transporter D172_006650 PF01618 MotA/TolQ/ExbB proton channel family D172_006655 PF02472 Biopolymer transport protein ExbD/TolR D172_006670 PF00691 OmpA family D172_006675 PF16331 TolA binding protein trimerisation D172_006675 PF13525 Outer membrane lipoprotein D172_006730 PF09308 LuxQ, periplasmic D172_006730 PF00512 His Kinase A (phospho-acceptor) domain D172_006730 PF00072 Response regulator receiver domain D172_006730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_006740 PF00544 Pectate lyase D172_006750 PF12697 Alpha/beta hydrolase family D172_006755 PF00701 Dihydrodipicolinate synthetase family D172_006775 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D172_006795 PF17946 RecC C-terminal domain D172_006800 PF12705 PD-(D/E)XK nuclease superfamily D172_006800 PF00580 UvrD/REP helicase N-terminal domain D172_006800 PF13361 UvrD-like helicase C-terminal domain D172_006805 PF13538 UvrD-like helicase C-terminal domain D172_006810 PF13426 PAS domain D172_006810 PF08447 PAS fold D172_006810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_006830 PF00582 Universal stress protein family D172_006835 PF13545 Crp-like helix-turn-helix domain D172_006835 PF00027 Cyclic nucleotide-binding domain D172_006850 PF00403 Heavy-metal-associated domain D172_006860 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D172_006860 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP D172_006875 PF00115 Cytochrome C and Quinol oxidase polypeptide I D172_006885 PF07715 TonB-dependent Receptor Plug Domain D172_006885 PF00593 TonB dependent receptor D172_006905 PF00270 DEAD/DEAH box helicase D172_006905 PF02559 CarD-like/TRCF domain D172_006905 PF00271 Helicase conserved C-terminal domain D172_006905 PF17757 UvrB interaction domain D172_006905 PF03461 TRCF domain D172_006910 PF00795 Carbon-nitrogen hydrolase D172_006915 PF04371 Porphyromonas-type peptidyl-arginine deiminase D172_006935 PF03466 LysR substrate binding domain D172_006935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_006955 PF00593 TonB dependent receptor D172_006955 PF07715 TonB-dependent Receptor Plug Domain D172_006960 PF02472 Biopolymer transport protein ExbD/TolR D172_006970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_006970 PF03466 LysR substrate binding domain D172_006985 PF00884 Sulfatase D172_006985 PF11893 Domain of unknown function (DUF3413) D172_006995 PF04245 37-kD nucleoid-associated bacterial protein D172_007000 PF12111 Polyribonucleotide phosphorylase C terminal D172_007000 PF10150 Ribonuclease E/G family D172_007000 PF00575 S1 RNA binding domain D172_007005 PF01479 S4 domain D172_007005 PF00849 RNA pseudouridylate synthase D172_007010 PF13419 Haloacid dehalogenase-like hydrolase D172_007020 PF02620 Large ribosomal RNA subunit accumulation protein YceD D172_007035 PF00698 Acyl transferase domain D172_007045 PF00550 Phosphopantetheine attachment site D172_007050 PF00109 Beta-ketoacyl synthase, N-terminal domain D172_007050 PF02801 Beta-ketoacyl synthase, C-terminal domain D172_007055 PF01063 Amino-transferase class IV D172_007060 PF02618 YceG-like family D172_007070 PF09115 DNA polymerase III, delta subunit, C terminal D172_007080 PF01026 TatD related DNase D172_007095 PF07729 FCD domain D172_007095 PF00392 Bacterial regulatory proteins, gntR family D172_007105 PF00285 Citrate synthase, C-terminal domain D172_007110 PF00330 Aconitase family (aconitate hydratase) D172_007110 PF00694 Aconitase C-terminal domain D172_007115 PF04303 PrpF protein D172_007135 PF03453 MoeA N-terminal region (domain I and II) D172_007135 PF00994 Probable molybdopterin binding domain D172_007135 PF03454 MoeA C-terminal region (domain IV) D172_007145 PF00528 Binding-protein-dependent transport system inner membrane component D172_007150 PF03459 TOBE domain D172_007150 PF00005 ABC transporter D172_007155 PF00899 ThiF family D172_007160 PF07690 Major Facilitator Superfamily D172_007165 PF00069 Protein kinase domain D172_007165 PF03793 PASTA domain D172_007175 PF07992 Pyridine nucleotide-disulphide oxidoreductase D172_007175 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D172_007175 PF04324 BFD-like [2Fe-2S] binding domain D172_007175 PF18267 Rubredoxin NAD+ reductase C-terminal domain D172_007175 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D172_007180 PF01568 Molydopterin dinucleotide binding domain D172_007180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain D172_007180 PF04324 BFD-like [2Fe-2S] binding domain D172_007180 PF00384 Molybdopterin oxidoreductase D172_007185 PF04055 Radical SAM superfamily D172_007185 PF06463 Molybdenum Cofactor Synthesis C D172_007190 PF12804 MobA-like NTP transferase domain D172_007195 PF00994 Probable molybdopterin binding domain D172_007200 PF01967 MoaC family D172_007205 PF02597 ThiS family D172_007210 PF02391 MoaE protein D172_007215 PF03475 3-alpha domain D172_007215 PF03473 MOSC domain D172_007220 PF00512 His Kinase A (phospho-acceptor) domain D172_007220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_007225 PF00072 Response regulator receiver domain D172_007225 PF00196 Bacterial regulatory proteins, luxR family D172_007230 PF00563 EAL domain D172_007230 PF03707 Bacterial signalling protein N terminal repeat D172_007230 PF00990 Diguanylate cyclase, GGDEF domain D172_007235 PF00672 HAMP domain D172_007235 PF00512 His Kinase A (phospho-acceptor) domain D172_007235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_007245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D172_007245 PF14824 Sirohaem biosynthesis protein central D172_007245 PF10414 Sirohaem synthase dimerisation region D172_007250 PF13806 Rieske-like [2Fe-2S] domain D172_007255 PF07992 Pyridine nucleotide-disulphide oxidoreductase D172_007255 PF04324 BFD-like [2Fe-2S] binding domain D172_007255 PF13806 Rieske-like [2Fe-2S] domain D172_007255 PF18267 Rubredoxin NAD+ reductase C-terminal domain D172_007255 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D172_007255 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D172_007260 PF00970 Oxidoreductase FAD-binding domain D172_007260 PF00042 Globin D172_007260 PF00175 Oxidoreductase NAD-binding domain D172_007275 PF02798 Glutathione S-transferase, N-terminal domain D172_007280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_007280 PF03466 LysR substrate binding domain D172_007285 PF00582 Universal stress protein family D172_007290 PF01740 STAS domain D172_007290 PF00916 Sulfate permease family D172_007310 PF00535 Glycosyl transferase family 2 D172_007315 PF13439 Glycosyltransferase Family 4 D172_007315 PF00534 Glycosyl transferases group 1 D172_007345 PF13439 Glycosyltransferase Family 4 D172_007345 PF00534 Glycosyl transferases group 1 D172_007350 PF02397 Bacterial sugar transferase D172_007365 PF10531 SLBB domain D172_007365 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D172_007365 PF02563 Polysaccharide biosynthesis/export protein D172_007375 PF12431 Transcriptional regulator D172_007375 PF00072 Response regulator receiver domain D172_007380 PF00158 Sigma-54 interaction domain D172_007380 PF00072 Response regulator receiver domain D172_007380 PF02954 Bacterial regulatory protein, Fis family D172_007385 PF13439 Glycosyltransferase Family 4 D172_007385 PF00534 Glycosyl transferases group 1 D172_007395 PF01933 Uncharacterised protein family UPF0052 D172_007400 PF00114 Pilin (bacterial filament) D172_007400 PF07963 Prokaryotic N-terminal methylation motif D172_007405 PF07963 Prokaryotic N-terminal methylation motif D172_007405 PF14245 Type IV pilin PilA D172_007435 PF04616 Glycosyl hydrolases family 43 D172_007445 PF07715 TonB-dependent Receptor Plug Domain D172_007445 PF00593 TonB dependent receptor D172_007460 PF04820 Tryptophan halogenase D172_007475 PF01270 Glycosyl hydrolases family 8 D172_007485 PF00331 Glycosyl hydrolase family 10 D172_007490 PF00331 Glycosyl hydrolase family 10 D172_007490 PF02013 Cellulose or protein binding domain D172_007490 PF00553 Cellulose binding domain D172_007495 PF00753 Metallo-beta-lactamase superfamily D172_007505 PF03466 LysR substrate binding domain D172_007505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_007520 PF00331 Glycosyl hydrolase family 10 D172_007525 PF01263 Aldose 1-epimerase D172_007535 PF02779 Transketolase, pyrimidine binding domain D172_007535 PF02780 Transketolase, C-terminal domain D172_007535 PF00456 Transketolase, thiamine diphosphate binding domain D172_007540 PF00923 Transaldolase/Fructose-6-phosphate aldolase D172_007550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D172_007550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D172_007555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D172_007560 PF04616 Glycosyl hydrolases family 43 D172_007560 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain D172_007565 PF00356 Bacterial regulatory proteins, lacI family D172_007570 PF00083 Sugar (and other) transporter D172_007575 PF01270 Glycosyl hydrolases family 8 D172_007590 PF01551 Peptidase family M23 D172_007610 PF13411 MerR HTH family regulatory protein D172_007620 PF03466 LysR substrate binding domain D172_007620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_007660 PF00884 Sulfatase D172_007660 PF16347 Domain of unknown function (DUF4976) D172_007665 PF00884 Sulfatase D172_007700 PF00593 TonB dependent receptor D172_007700 PF07715 TonB-dependent Receptor Plug Domain D172_007710 PF00884 Sulfatase D172_007715 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D172_007715 PF13378 Enolase C-terminal domain-like D172_007720 PF08450 SMP-30/Gluconolactonase/LRE-like region D172_007725 PF00083 Sugar (and other) transporter D172_007740 PF00171 Aldehyde dehydrogenase family D172_007745 PF13378 Enolase C-terminal domain-like D172_007745 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D172_007750 PF05035 2-keto-3-deoxy-galactonokinase D172_007755 PF01081 KDPG and KHG aldolase D172_007760 PF00392 Bacterial regulatory proteins, gntR family D172_007760 PF00155 Aminotransferase class I and II D172_007765 PF00392 Bacterial regulatory proteins, gntR family D172_007765 PF00155 Aminotransferase class I and II D172_007775 PF12833 Helix-turn-helix domain D172_007780 PF00722 Glycosyl hydrolases family 16 D172_007780 PF02368 Bacterial Ig-like domain (group 2) D172_007810 PF01554 MatE D172_007815 PF00677 Lumazine binding domain D172_007845 PF01979 Amidohydrolase family D172_007855 PF03971 Monomeric isocitrate dehydrogenase D172_007860 PF00313 'Cold-shock' DNA-binding domain D172_007865 PF02617 ATP-dependent Clp protease adaptor protein ClpS D172_007870 PF02861 Clp amino terminal domain, pathogenicity island component D172_007870 PF07724 AAA domain (Cdc48 subfamily) D172_007870 PF00004 ATPase family associated with various cellular activities (AAA) D172_007870 PF10431 C-terminal, D2-small domain, of ClpB protein D172_007870 PF17871 AAA lid domain D172_007880 PF04377 Arginine-tRNA-protein transferase, C terminus D172_007880 PF04376 Arginine-tRNA-protein transferase, N terminus D172_007890 PF07992 Pyridine nucleotide-disulphide oxidoreductase D172_007895 PF13091 PLD-like domain D172_007900 PF05222 Alanine dehydrogenase/PNT, N-terminal domain D172_007900 PF01262 Alanine dehydrogenase/PNT, C-terminal domain D172_007905 PF01037 Lrp/AsnC ligand binding domain D172_007910 PF09397 Ftsk gamma domain D172_007910 PF01580 FtsK/SpoIIIE family D172_007910 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D172_007910 PF17854 FtsK alpha domain D172_007920 PF00004 ATPase family associated with various cellular activities (AAA) D172_007920 PF16193 AAA C-terminal domain D172_007920 PF12002 MgsA AAA+ ATPase C terminal D172_007940 PF13936 Helix-turn-helix domain D172_007975 PF07995 Glucose / Sorbosone dehydrogenase D172_007985 PF00155 Aminotransferase class I and II D172_007995 PF12392 Collagenase D172_007995 PF01136 Peptidase family U32 D172_008000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_008000 PF16527 Two-component sensor protein CpxA, periplasmic domain D172_008000 PF00672 HAMP domain D172_008000 PF00512 His Kinase A (phospho-acceptor) domain D172_008005 PF00486 Transcriptional regulatory protein, C terminal D172_008005 PF00072 Response regulator receiver domain D172_008020 PF03734 L,D-transpeptidase catalytic domain D172_008025 PF13533 Biotin-lipoyl like D172_008030 PF00005 ABC transporter D172_008050 PF00722 Glycosyl hydrolases family 16 D172_008055 PF00664 ABC transporter transmembrane region D172_008055 PF00005 ABC transporter D172_008095 PF08007 Cupin superfamily protein D172_008100 PF08328 Adenylosuccinate lyase C-terminal D172_008100 PF00206 Lyase D172_008115 PF00563 EAL domain D172_008115 PF01590 GAF domain D172_008115 PF00990 Diguanylate cyclase, GGDEF domain D172_008115 PF00360 Phytochrome region D172_008120 PF00293 NUDIX domain D172_008125 PF00849 RNA pseudouridylate synthase D172_008130 PF04358 DsrC like protein D172_008140 PF02635 DsrE/DsrF-like family D172_008145 PF02635 DsrE/DsrF-like family D172_008150 PF01027 Inhibitor of apoptosis-promoting Bax1 D172_008185 PF13185 GAF domain D172_008195 PF04352 ProQ/FINO family D172_008195 PF17516 ProQ C-terminal domain D172_008200 PF11818 C-terminal domain of tail specific protease (DUF3340) D172_008200 PF00595 PDZ domain D172_008200 PF03572 Peptidase family S41 D172_008200 PF17804 Tail specific protease N-terminal domain D172_008210 PF11940 Domain of unknown function (DUF3458) Ig-like fold D172_008210 PF17432 Domain of unknown function (DUF3458_C) ARM repeats D172_008210 PF01433 Peptidase family M1 domain D172_008225 PF07044 Protein of unknown function (DUF1329) D172_008230 PF14870 Photosynthesis system II assembly factor YCF48 D172_008240 PF05088 Bacterial NAD-glutamate dehydrogenase D172_008280 PF13567 Domain of unknown function (DUF4131) D172_008280 PF03772 Competence protein D172_008280 PF00753 Metallo-beta-lactamase superfamily D172_008305 PF00849 RNA pseudouridylate synthase D172_008310 PF00899 ThiF family D172_008315 PF02657 Fe-S metabolism associated domain D172_008320 PF00266 Aminotransferase class-V D172_008325 PF00285 Citrate synthase, C-terminal domain D172_008330 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D172_008335 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D172_008340 PF02910 Fumarate reductase flavoprotein C-term D172_008340 PF00890 FAD binding domain D172_008345 PF13085 2Fe-2S iron-sulfur cluster binding domain D172_008350 PF00676 Dehydrogenase E1 component D172_008350 PF16078 2-oxoglutarate dehydrogenase N-terminus D172_008350 PF16870 2-oxoglutarate dehydrogenase C-terminal D172_008350 PF02779 Transketolase, pyrimidine binding domain D172_008355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D172_008355 PF02817 e3 binding domain D172_008355 PF00364 Biotin-requiring enzyme D172_008365 PF02629 CoA binding domain D172_008365 PF00549 CoA-ligase D172_008380 PF01475 Ferric uptake regulator family D172_008385 PF00258 Flavodoxin D172_008390 PF01402 Ribbon-helix-helix protein, copG family D172_008400 PF12697 Alpha/beta hydrolase family D172_008410 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D172_008410 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D172_008410 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D172_008410 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D172_008420 PF00676 Dehydrogenase E1 component D172_008420 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal D172_008425 PF02779 Transketolase, pyrimidine binding domain D172_008425 PF02780 Transketolase, C-terminal domain D172_008430 PF00364 Biotin-requiring enzyme D172_008430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D172_008430 PF02817 e3 binding domain D172_008455 PF00005 ABC transporter D172_008460 PF12679 ABC-2 family transporter protein D172_008465 PF00672 HAMP domain D172_008465 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D172_008465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_008465 PF00512 His Kinase A (phospho-acceptor) domain D172_008465 PF01627 Hpt domain D172_008465 PF00072 Response regulator receiver domain D172_008480 PF18389 TrmO C-terminal domain D172_008480 PF01980 tRNA-methyltransferase O D172_008500 PF01012 Electron transfer flavoprotein domain D172_008505 PF01012 Electron transfer flavoprotein domain D172_008505 PF00766 Electron transfer flavoprotein FAD-binding domain D172_008520 PF00132 Bacterial transferase hexapeptide (six repeats) D172_008525 PF00005 ABC transporter D172_008525 PF08402 TOBE domain D172_008530 PF00528 Binding-protein-dependent transport system inner membrane component D172_008545 PF00202 Aminotransferase class-III D172_008555 PF00155 Aminotransferase class I and II D172_008560 PF08241 Methyltransferase domain D172_008575 PF01435 Peptidase family M48 D172_008580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D172_008590 PF01527 Transposase D172_008595 PF13276 HTH-like domain D172_008595 PF00665 Integrase core domain D172_008595 PF13333 Integrase core domain D172_008640 PF00005 ABC transporter D172_008655 PF00593 TonB dependent receptor D172_008655 PF07715 TonB-dependent Receptor Plug Domain D172_008665 PF01625 Peptide methionine sulfoxide reductase D172_008700 PF12848 ABC transporter D172_008700 PF00005 ABC transporter D172_008705 PF00731 AIR carboxylase D172_008710 PF02222 ATP-grasp domain D172_008710 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D172_008735 PF03949 Malic enzyme, NAD binding domain D172_008735 PF00390 Malic enzyme, N-terminal domain D172_008745 PF10011 Predicted membrane protein (DUF2254) D172_008765 PF18415 Histidine kinase receptor ArcB trans-membrane domain D172_008765 PF01627 Hpt domain D172_008765 PF00989 PAS fold D172_008765 PF00072 Response regulator receiver domain D172_008765 PF00512 His Kinase A (phospho-acceptor) domain D172_008765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_008770 PF00561 alpha/beta hydrolase fold D172_008780 PF00005 ABC transporter D172_008780 PF08402 TOBE domain D172_008785 PF00528 Binding-protein-dependent transport system inner membrane component D172_008790 PF00528 Binding-protein-dependent transport system inner membrane component D172_008805 PF00072 Response regulator receiver domain D172_008810 PF17863 AAA lid domain D172_008810 PF07726 ATPase family associated with various cellular activities (AAA) D172_008820 PF13559 Domain of unknown function (DUF4129) D172_008820 PF01841 Transglutaminase-like superfamily D172_008820 PF11992 Domain of unknown function (DUF3488) D172_008825 PF13726 Na+-H+ antiporter family D172_008825 PF03553 Na+/H+ antiporter family D172_008830 PF03061 Thioesterase superfamily D172_008835 PF08460 Bacterial SH3 domain D172_008835 PF01551 Peptidase family M23 D172_008850 PF04957 Ribosome modulation factor D172_008855 PF16925 Tetracyclin repressor-like, C-terminal domain D172_008855 PF00440 Bacterial regulatory proteins, tetR family D172_008860 PF08240 Alcohol dehydrogenase GroES-like domain D172_008860 PF00107 Zinc-binding dehydrogenase D172_008865 PF09905 DNA-binding protein VF530 D172_008920 PF01717 Cobalamin-independent synthase, Catalytic domain D172_008920 PF08267 Cobalamin-independent synthase, N-terminal domain D172_008965 PF02371 Transposase IS116/IS110/IS902 family D172_008965 PF01548 Transposase D172_008995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D172_008995 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D172_009000 PF00378 Enoyl-CoA hydratase/isomerase D172_009005 PF00378 Enoyl-CoA hydratase/isomerase D172_009015 PF00171 Aldehyde dehydrogenase family D172_009020 PF02803 Thiolase, C-terminal domain D172_009020 PF00108 Thiolase, N-terminal domain D172_009025 PF00376 MerR family regulatory protein D172_009025 PF09278 MerR, DNA binding D172_009030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D172_009030 PF02770 Acyl-CoA dehydrogenase, middle domain D172_009030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D172_009035 PF01039 Carboxyl transferase domain D172_009045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D172_009045 PF00289 Biotin carboxylase, N-terminal domain D172_009045 PF02785 Biotin carboxylase C-terminal domain D172_009045 PF00364 Biotin-requiring enzyme D172_009050 PF00682 HMGL-like D172_009055 PF01144 Coenzyme A transferase D172_009060 PF01144 Coenzyme A transferase D172_009065 PF03466 LysR substrate binding domain D172_009065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_009070 PF01641 SelR domain D172_009070 PF01625 Peptide methionine sulfoxide reductase D172_009075 PF02682 Carboxyltransferase domain, subdomain C and D D172_009080 PF02626 Carboxyltransferase domain, subdomain A and B D172_009095 PF01470 Pyroglutamyl peptidase D172_009100 PF00733 Asparagine synthase D172_009100 PF13537 Glutamine amidotransferase domain D172_009115 PF12867 DinB superfamily D172_009115 PF03781 Sulfatase-modifying factor enzyme 1 D172_009120 PF02028 BCCT, betaine/carnitine/choline family transporter D172_009125 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D172_009125 PF14579 Helix-hairpin-helix motif D172_009125 PF02811 PHP domain D172_009125 PF00929 Exonuclease D172_009125 PF07733 Bacterial DNA polymerase III alpha NTPase domain D172_009130 PF01380 SIS domain D172_009130 PF00571 CBS domain D172_009140 PF00271 Helicase conserved C-terminal domain D172_009140 PF00270 DEAD/DEAH box helicase D172_009145 PF13509 S1 domain D172_009145 PF17783 CvfB-like winged helix domain D172_009160 PF18073 Rubredoxin metal binding domain D172_009175 PF00575 S1 RNA binding domain D172_009180 PF02224 Cytidylate kinase D172_009195 PF00521 DNA gyrase/topoisomerase IV, subunit A D172_009195 PF03989 DNA gyrase C-terminal domain, beta-propeller D172_009205 PF13419 Haloacid dehalogenase-like hydrolase D172_009210 PF02867 Ribonucleotide reductase, barrel domain D172_009210 PF00317 Ribonucleotide reductase, all-alpha domain D172_009210 PF03477 ATP cone domain D172_009215 PF00268 Ribonucleotide reductase, small chain D172_009220 PF00171 Aldehyde dehydrogenase family D172_009230 PF00107 Zinc-binding dehydrogenase D172_009230 PF08240 Alcohol dehydrogenase GroES-like domain D172_009240 PF00884 Sulfatase D172_009245 PF16385 Domain of unknown function D172_009245 PF00884 Sulfatase D172_009250 PF12833 Helix-turn-helix domain D172_009255 PF02449 Beta-galactosidase D172_009255 PF17992 Agarase CBM like domain D172_009265 PF08281 Sigma-70, region 4 D172_009265 PF04542 Sigma-70 region 2 D172_009270 PF10282 Lactonase, 7-bladed beta-propeller D172_009280 PF07992 Pyridine nucleotide-disulphide oxidoreductase D172_009280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D172_009290 PF00474 Sodium:solute symporter family D172_009305 PF16363 GDP-mannose 4,6 dehydratase D172_009315 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain D172_009315 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain D172_009325 PF00294 pfkB family carbohydrate kinase D172_009330 PF00083 Sugar (and other) transporter D172_009335 PF17992 Agarase CBM like domain D172_009335 PF02449 Beta-galactosidase D172_009340 PF07729 FCD domain D172_009340 PF00392 Bacterial regulatory proteins, gntR family D172_009350 PF16347 Domain of unknown function (DUF4976) D172_009350 PF00884 Sulfatase D172_009360 PF13333 Integrase core domain D172_009360 PF13276 HTH-like domain D172_009360 PF00665 Integrase core domain D172_009365 PF01527 Transposase D172_009370 PF06940 Domain of unknown function (DUF1287) D172_009400 PF05721 Phytanoyl-CoA dioxygenase (PhyH) D172_009435 PF18206 Porphyranase catalytic subdomain 1 D172_009445 PF08240 Alcohol dehydrogenase GroES-like domain D172_009445 PF00107 Zinc-binding dehydrogenase D172_009450 PF10114 Sensory domain found in PocR D172_009450 PF12833 Helix-turn-helix domain D172_009455 PF14759 Reductase C-terminal D172_009455 PF07992 Pyridine nucleotide-disulphide oxidoreductase D172_009465 PF00067 Cytochrome P450 D172_009470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain D172_009470 PF13378 Enolase C-terminal domain-like D172_009475 PF08450 SMP-30/Gluconolactonase/LRE-like region D172_009480 PF02449 Beta-galactosidase D172_009480 PF17992 Agarase CBM like domain D172_009485 PF00593 TonB dependent receptor D172_009485 PF07715 TonB-dependent Receptor Plug Domain D172_009490 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D172_009490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D172_009510 PF00881 Nitroreductase family D172_009520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D172_009520 PF07992 Pyridine nucleotide-disulphide oxidoreductase D172_009525 PF01343 Peptidase family S49 D172_009530 PF17763 Glutaminase/Asparaginase C-terminal domain D172_009530 PF00710 Asparaginase, N-terminal D172_009535 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain D172_009535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D172_009540 PF02887 Pyruvate kinase, alpha/beta domain D172_009540 PF00224 Pyruvate kinase, barrel domain D172_009545 PF04397 LytTr DNA-binding domain D172_009545 PF00072 Response regulator receiver domain D172_009550 PF06580 Histidine kinase D172_009550 PF00672 HAMP domain D172_009550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_009550 PF02743 Cache domain D172_009555 PF00916 Sulfate permease family D172_009555 PF01740 STAS domain D172_009560 PF13404 AsnC-type helix-turn-helix domain D172_009560 PF01037 Lrp/AsnC ligand binding domain D172_009585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D172_009585 PF03129 Anticodon binding domain D172_009585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D172_009585 PF02824 TGS domain D172_009595 PF13193 AMP-binding enzyme C-terminal domain D172_009595 PF00501 AMP-binding enzyme D172_009600 PF16360 GTP-binding GTPase Middle Region D172_009600 PF01926 50S ribosome-binding GTPase D172_009600 PF13167 GTP-binding GTPase N-terminal D172_009605 PF07308 Protein of unknown function (DUF1456) D172_009610 PF02687 FtsX-like permease family D172_009610 PF12704 MacB-like periplasmic core domain D172_009620 PF12704 MacB-like periplasmic core domain D172_009620 PF02687 FtsX-like permease family D172_009625 PF03466 LysR substrate binding domain D172_009625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_009630 PF00107 Zinc-binding dehydrogenase D172_009630 PF08240 Alcohol dehydrogenase GroES-like domain D172_009635 PF00756 Putative esterase D172_009650 PF02308 MgtC family D172_009665 PF00109 Beta-ketoacyl synthase, N-terminal domain D172_009665 PF02801 Beta-ketoacyl synthase, C-terminal domain D172_009670 PF12833 Helix-turn-helix domain D172_009675 PF02308 MgtC family D172_009685 PF08443 RimK-like ATP-grasp domain D172_009685 PF18030 RimK PreATP-grasp domain D172_009690 PF03831 PhnA domain D172_009690 PF08274 PhnA Zinc-Ribbon D172_009700 PF12833 Helix-turn-helix domain D172_009725 PF02355 Protein export membrane protein D172_009725 PF07549 SecD/SecF GG Motif D172_009730 PF02355 Protein export membrane protein D172_009730 PF13721 SecD export protein N-terminal TM region D172_009730 PF07549 SecD/SecF GG Motif D172_009740 PF00005 ABC transporter D172_009740 PF00664 ABC transporter transmembrane region D172_009745 PF01431 Peptidase family M13 D172_009745 PF05649 Peptidase family M13 D172_009765 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D172_009765 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D172_009770 PF01081 KDPG and KHG aldolase D172_009775 PF00920 Dehydratase family D172_009780 PF00356 Bacterial regulatory proteins, lacI family D172_009785 PF02685 Glucokinase D172_009790 PF00356 Bacterial regulatory proteins, lacI family D172_009800 PF04397 LytTr DNA-binding domain D172_009800 PF00072 Response regulator receiver domain D172_009810 PF00933 Glycosyl hydrolase family 3 N terminal domain D172_009810 PF01915 Glycosyl hydrolase family 3 C-terminal domain D172_009810 PF14310 Fibronectin type III-like domain D172_009820 PF07715 TonB-dependent Receptor Plug Domain D172_009820 PF00593 TonB dependent receptor D172_009825 PF09137 Glucodextranase, domain N D172_009825 PF00723 Glycosyl hydrolases family 15 D172_009835 PF00128 Alpha amylase, catalytic domain D172_009835 PF16657 Maltogenic Amylase, C-terminal domain D172_009835 PF02903 Alpha amylase, N-terminal ig-like domain D172_009840 PF09087 Cyclomaltodextrinase, N-terminal D172_009840 PF10438 Cyclo-malto-dextrinase C-terminal domain D172_009840 PF00128 Alpha amylase, catalytic domain D172_009845 PF04820 Tryptophan halogenase D172_009855 PF00128 Alpha amylase, catalytic domain D172_009860 PF03350 Uncharacterized protein family, UPF0114 D172_009870 PF01396 Topoisomerase DNA binding C4 zinc finger D172_009870 PF01751 Toprim domain D172_009870 PF01131 DNA topoisomerase D172_009870 PF08272 Topoisomerase I zinc-ribbon-like D172_009880 PF00375 Sodium:dicarboxylate symporter family D172_009885 PF08496 Peptidase family S49 N-terminal D172_009885 PF01343 Peptidase family S49 D172_009890 PF12262 Bacterial virulence factor lipase N-terminal D172_009895 PF00106 short chain dehydrogenase D172_009900 PF00849 RNA pseudouridylate synthase D172_009900 PF01479 S4 domain D172_009905 PF04079 Segregation and condensation complex subunit ScpB D172_009930 PF13847 Methyltransferase domain D172_009935 PF04217 Protein of unknown function, DUF412 D172_009940 PF00871 Acetokinase family D172_009945 PF01515 Phosphate acetyl/butaryl transferase D172_009945 PF07085 DRTGG domain D172_009960 PF03960 ArsC family D172_009970 PF02557 D-alanyl-D-alanine carboxypeptidase D172_009975 PF00892 EamA-like transporter family D172_009985 PF05114 Protein of unknown function (DUF692) D172_010005 PF13036 Peptidoglycan-synthase activator LpoB D172_010010 PF05433 Glycine zipper 2TM domain D172_010015 PF00155 Aminotransferase class I and II D172_010040 PF10609 NUBPL iron-transfer P-loop NTPase D172_010050 PF01081 KDPG and KHG aldolase D172_010055 PF10502 Signal peptidase, peptidase S26 D172_010075 PF03466 LysR substrate binding domain D172_010075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_010095 PF00180 Isocitrate/isopropylmalate dehydrogenase D172_010115 PF04264 YceI-like domain D172_010120 PF01292 Prokaryotic cytochrome b561 D172_010125 PF02616 Segregation and condensation protein ScpA D172_010130 PF01300 Telomere recombination D172_010135 PF02811 PHP domain D172_010140 PF00425 chorismate binding enzyme D172_010140 PF04715 Anthranilate synthase component I, N terminal region D172_010145 PF00117 Glutamine amidotransferase class-I D172_010155 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D172_010155 PF00218 Indole-3-glycerol phosphate synthase D172_010160 PF00291 Pyridoxal-phosphate dependent enzyme D172_010165 PF00290 Tryptophan synthase alpha chain D172_010170 PF01965 DJ-1/PfpI family D172_010175 PF00216 Bacterial DNA-binding protein D172_010180 PF04279 Intracellular septation protein A D172_010190 PF00209 Sodium:neurotransmitter symporter family D172_010195 PF03795 YCII-related domain D172_010205 PF00072 Response regulator receiver domain D172_010205 PF00486 Transcriptional regulatory protein, C terminal D172_010210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_010210 PF08918 PhoQ Sensor D172_010225 PF01594 AI-2E family transporter D172_010230 PF08338 Domain of unknown function (DUF1731) D172_010230 PF01370 NAD dependent epimerase/dehydratase family D172_010235 PF00933 Glycosyl hydrolase family 3 N terminal domain D172_010235 PF01915 Glycosyl hydrolase family 3 C-terminal domain D172_010235 PF14310 Fibronectin type III-like domain D172_010240 PF07690 Major Facilitator Superfamily D172_010245 PF00232 Glycosyl hydrolase family 1 D172_010255 PF00356 Bacterial regulatory proteins, lacI family D172_010270 PF13286 Phosphohydrolase-associated domain D172_010270 PF01966 HD domain D172_010275 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D172_010275 PF00326 Prolyl oligopeptidase family D172_010285 PF07715 TonB-dependent Receptor Plug Domain D172_010285 PF00593 TonB dependent receptor D172_010290 PF01063 Amino-transferase class IV D172_010295 PF00487 Fatty acid desaturase D172_010300 PF00970 Oxidoreductase FAD-binding domain D172_010300 PF00175 Oxidoreductase NAD-binding domain D172_010300 PF00111 2Fe-2S iron-sulfur cluster binding domain D172_010305 PF07995 Glucose / Sorbosone dehydrogenase D172_010325 PF07883 Cupin domain D172_010340 PF09997 Predicted membrane protein (DUF2238) D172_010345 PF00106 short chain dehydrogenase D172_010380 PF04820 Tryptophan halogenase D172_010385 PF14310 Fibronectin type III-like domain D172_010385 PF00933 Glycosyl hydrolase family 3 N terminal domain D172_010385 PF01915 Glycosyl hydrolase family 3 C-terminal domain D172_010390 PF00232 Glycosyl hydrolase family 1 D172_010400 PF00356 Bacterial regulatory proteins, lacI family D172_010405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_010405 PF03466 LysR substrate binding domain D172_010440 PF05114 Protein of unknown function (DUF692) D172_010460 PF00999 Sodium/hydrogen exchanger family D172_010470 PF12697 Alpha/beta hydrolase family D172_010620 PF00392 Bacterial regulatory proteins, gntR family D172_010620 PF07729 FCD domain D172_010640 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system D172_010650 PF05840 Bacteriophage replication gene A protein (GPA) D172_010680 PF00717 Peptidase S24-like D172_010710 PF13356 Arm DNA-binding domain D172_010710 PF14659 Phage integrase, N-terminal SAM-like domain D172_010710 PF00589 Phage integrase family D172_010715 PF00929 Exonuclease D172_010715 PF08411 Exonuclease C-terminal D172_010720 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D172_010720 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D172_010725 PF00255 Glutathione peroxidase D172_010730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D172_010730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D172_010735 PF00209 Sodium:neurotransmitter symporter family D172_010745 PF01842 ACT domain D172_010745 PF00696 Amino acid kinase family D172_010750 PF03600 Citrate transporter D172_010775 PF01625 Peptide methionine sulfoxide reductase D172_010775 PF01641 SelR domain D172_010785 PF03692 Putative zinc- or iron-chelating domain D172_010795 PF00873 AcrB/AcrD/AcrF family D172_010800 PF01738 Dienelactone hydrolase family D172_010815 PF03466 LysR substrate binding domain D172_010815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_010820 PF08240 Alcohol dehydrogenase GroES-like domain D172_010820 PF00107 Zinc-binding dehydrogenase D172_010845 PF00881 Nitroreductase family D172_010860 PF01272 Transcription elongation factor, GreA/GreB, C-term D172_010860 PF03449 Transcription elongation factor, N-terminal D172_010865 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D172_010865 PF02142 MGS-like domain D172_010865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D172_010870 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D172_010870 PF00117 Glutamine amidotransferase class-I D172_010890 PF12697 Alpha/beta hydrolase family D172_010900 PF07690 Major Facilitator Superfamily D172_010910 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding D172_010910 PF01628 HrcA protein C terminal domain D172_010925 PF02463 RecF/RecN/SMC N terminal domain D172_010930 PF00990 Diguanylate cyclase, GGDEF domain D172_010935 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D172_010935 PF07992 Pyridine nucleotide-disulphide oxidoreductase D172_010940 PF01645 Conserved region in glutamate synthase D172_010940 PF01493 GXGXG motif D172_010940 PF00310 Glutamine amidotransferases class-II D172_010940 PF04898 Glutamate synthase central domain D172_010950 PF00005 ABC transporter D172_010955 PF12704 MacB-like periplasmic core domain D172_010955 PF00005 ABC transporter D172_010955 PF02687 FtsX-like permease family D172_010960 PF00005 ABC transporter D172_010960 PF02687 FtsX-like permease family D172_010960 PF12704 MacB-like periplasmic core domain D172_010965 PF00072 Response regulator receiver domain D172_010965 PF00158 Sigma-54 interaction domain D172_010970 PF00672 HAMP domain D172_010970 PF00512 His Kinase A (phospho-acceptor) domain D172_010970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_010975 PF00462 Glutaredoxin D172_010985 PF08298 PrkA AAA domain D172_010985 PF06798 PrkA serine protein kinase C-terminal domain D172_010990 PF04285 Protein of unknown function (DUF444) D172_010995 PF04293 SpoVR like protein D172_011000 PF00582 Universal stress protein family D172_011005 PF00990 Diguanylate cyclase, GGDEF domain D172_011010 PF01339 CheB methylesterase D172_011010 PF00072 Response regulator receiver domain D172_011015 PF08534 Redoxin D172_011030 PF00849 RNA pseudouridylate synthase D172_011035 PF01553 Acyltransferase D172_011035 PF00501 AMP-binding enzyme D172_011050 PF12170 DNA polymerase III tau subunit V interacting with alpha D172_011050 PF12169 DNA polymerase III subunits gamma and tau domain III D172_011050 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding D172_011060 PF09836 Putative DNA-binding domain D172_011065 PF05114 Protein of unknown function (DUF692) D172_011075 PF01207 Dihydrouridine synthase (Dus) D172_011095 PF03544 Gram-negative bacterial TonB protein C-terminal D172_011100 PF02472 Biopolymer transport protein ExbD/TolR D172_011105 PF01618 MotA/TolQ/ExbB proton channel family D172_011110 PF01618 MotA/TolQ/ExbB proton channel family D172_011120 PF00313 'Cold-shock' DNA-binding domain D172_011125 PF01979 Amidohydrolase family D172_011130 PF01590 GAF domain D172_011130 PF00990 Diguanylate cyclase, GGDEF domain D172_011130 PF00360 Phytochrome region D172_011130 PF00563 EAL domain D172_011135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_011135 PF03466 LysR substrate binding domain D172_011140 PF02698 DUF218 domain D172_011145 PF01784 NIF3 (NGG1p interacting factor 3) D172_011165 PF01979 Amidohydrolase family D172_011170 PF06167 Glucose-regulated metallo-peptidase M90 D172_011175 PF00302 Chloramphenicol acetyltransferase D172_011180 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase D172_011180 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain D172_011190 PF04715 Anthranilate synthase component I, N terminal region D172_011190 PF00425 chorismate binding enzyme D172_011195 PF00293 NUDIX domain D172_011200 PF03313 Serine dehydratase alpha chain D172_011200 PF03315 Serine dehydratase beta chain D172_011205 PF00860 Permease family D172_011220 PF02810 SEC-C motif D172_011255 PF01966 HD domain D172_011270 PF00072 Response regulator receiver domain D172_011270 PF00990 Diguanylate cyclase, GGDEF domain D172_011275 PF04408 Helicase associated domain (HA2) D172_011275 PF11898 Domain of unknown function (DUF3418) D172_011275 PF00271 Helicase conserved C-terminal domain D172_011275 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D172_011275 PF00270 DEAD/DEAH box helicase D172_011280 PF01112 Asparaginase D172_011290 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D172_011295 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D172_011295 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D172_011305 PF00266 Aminotransferase class-V D172_011310 PF01594 AI-2E family transporter D172_011325 PF01435 Peptidase family M48 D172_011330 PF03960 ArsC family D172_011335 PF03358 NADPH-dependent FMN reductase D172_011350 PF05494 MlaC protein D172_011355 PF09411 Lipid A 3-O-deacylase (PagL) D172_011365 PF06804 NlpB/DapX lipoprotein D172_011370 PF01842 ACT domain D172_011375 PF00578 AhpC/TSA family D172_011405 PF00665 Integrase core domain D172_011405 PF13333 Integrase core domain D172_011405 PF13276 HTH-like domain D172_011410 PF01527 Transposase D172_011420 PF13649 Methyltransferase domain D172_011425 PF04055 Radical SAM superfamily D172_011455 PF10672 S-adenosylmethionine-dependent methyltransferase D172_011455 PF17785 PUA-like domain D172_011465 PF01554 MatE D172_011495 PF17157 Gammaproteobacterial periplasmic sensor domain D172_011495 PF00990 Diguanylate cyclase, GGDEF domain D172_011495 PF00563 EAL domain D172_011505 PF04060 Putative Fe-S cluster D172_011510 PF12838 4Fe-4S dicluster domain D172_011510 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D172_011510 PF10531 SLBB domain D172_011510 PF13375 RnfC Barrel sandwich hybrid domain D172_011515 PF03116 NQR2, RnfD, RnfE family D172_011520 PF04205 FMN-binding domain D172_011525 PF02508 Rnf-Nqr subunit, membrane protein D172_011530 PF00730 HhH-GPD superfamily base excision DNA repair protein D172_011530 PF10576 Iron-sulfur binding domain of endonuclease III D172_011530 PF00633 Helix-hairpin-helix motif D172_011550 PF01527 Transposase D172_011555 PF13276 HTH-like domain D172_011555 PF13333 Integrase core domain D172_011555 PF00665 Integrase core domain D172_011560 PF13175 AAA ATPase domain D172_011585 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH D172_011590 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain D172_011590 PF01276 Orn/Lys/Arg decarboxylase, major domain D172_011605 PF00392 Bacterial regulatory proteins, gntR family D172_011605 PF07729 FCD domain D172_011610 PF13683 Integrase core domain D172_011610 PF13276 HTH-like domain D172_011615 PF01527 Transposase D172_011635 PF01116 Fructose-bisphosphate aldolase class-II D172_011640 PF01081 KDPG and KHG aldolase D172_011645 PF00294 pfkB family carbohydrate kinase D172_011650 PF07690 Major Facilitator Superfamily D172_011655 PF07883 Cupin domain D172_011660 PF05426 Alginate lyase D172_011660 PF07940 Heparinase II/III-like protein D172_011665 PF14592 Chondroitinase B D172_011670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase D172_011670 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase D172_011675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D172_011680 PF01258 Prokaryotic dksA/traR C4-type zinc finger D172_011685 PF00675 Insulinase (Peptidase family M16) D172_011685 PF05193 Peptidase M16 inactive domain D172_011770 PF13333 Integrase core domain D172_011770 PF00665 Integrase core domain D172_011770 PF13276 HTH-like domain D172_011775 PF00072 Response regulator receiver domain D172_011775 PF00486 Transcriptional regulatory protein, C terminal D172_011780 PF01641 SelR domain D172_011800 PF04354 ZipA, C-terminal FtsZ-binding domain D172_011805 PF06470 SMC proteins Flexible Hinge Domain D172_011805 PF02463 RecF/RecN/SMC N terminal domain D172_011810 PF00588 SpoU rRNA Methylase family D172_011810 PF08032 RNA 2'-O ribose methyltransferase substrate binding D172_011815 PF04632 Fusaric acid resistance protein family D172_011820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D172_011820 PF00529 HlyD membrane-fusion protein of T1SS D172_011830 PF05987 Bacterial protein of unknown function (DUF898) D172_011845 PF00491 Arginase family D172_011850 PF17810 Arginine decarboxylase helical bundle domain D172_011850 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D172_011850 PF17944 Arginine decarboxylase C-terminal helical extension D172_011855 PF02694 Uncharacterised BCR, YnfA/UPF0060 family D172_011885 PF04241 Protein of unknown function (DUF423) D172_011895 PF03466 LysR substrate binding domain D172_011895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_011905 PF05684 Protein of unknown function (DUF819) D172_011920 PF11849 Domain of unknown function (DUF3369) D172_011925 PF13847 Methyltransferase domain D172_011925 PF17827 PrmC N-terminal domain D172_011950 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D172_011950 PF14572 Phosphoribosyl synthetase-associated domain D172_011965 PF01926 50S ribosome-binding GTPase D172_011965 PF06071 Protein of unknown function (DUF933) D172_012025 PF00990 Diguanylate cyclase, GGDEF domain D172_012025 PF00563 EAL domain D172_012025 PF03707 Bacterial signalling protein N terminal repeat D172_012030 PF01494 FAD binding domain D172_012040 PF02562 PhoH-like protein D172_012050 PF03471 Transporter associated domain D172_012050 PF00571 CBS domain D172_012055 PF00795 Carbon-nitrogen hydrolase D172_012080 PF05016 ParE toxin of type II toxin-antitoxin system, parDE D172_012100 PF01554 MatE D172_012110 PF01810 LysE type translocator D172_012125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D172_012125 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D172_012130 PF13654 AAA domain D172_012130 PF05362 Lon protease (S16) C-terminal proteolytic domain D172_012135 PF07295 Zinc-ribbon containing domain D172_012145 PF04390 Lipopolysaccharide-assembly D172_012155 PF01467 Cytidylyltransferase-like D172_012170 PF03717 Penicillin-binding Protein dimerisation domain D172_012170 PF00905 Penicillin binding protein transpeptidase domain D172_012175 PF01098 Cell cycle protein D172_012180 PF05036 Sporulation related domain D172_012180 PF03330 Lytic transglycolase D172_012185 PF07943 Penicillin-binding protein 5, C-terminal domain D172_012185 PF00768 D-alanyl-D-alanine carboxypeptidase D172_012210 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) D172_012215 PF04151 Bacterial pre-peptidase C-terminal domain D172_012215 PF04389 Peptidase family M28 D172_012225 PF01527 Transposase D172_012230 PF13333 Integrase core domain D172_012230 PF13276 HTH-like domain D172_012230 PF00665 Integrase core domain D172_012270 PF00293 NUDIX domain D172_012340 PF00403 Heavy-metal-associated domain D172_012345 PF13411 MerR HTH family regulatory protein D172_012360 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) D172_012370 PF00361 Proton-conducting membrane transporter D172_012375 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D172_012380 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D172_012380 PF13244 Domain of unknown function (DUF4040) D172_012380 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter D172_012380 PF00361 Proton-conducting membrane transporter D172_012390 PF07719 Tetratricopeptide repeat D172_012390 PF13181 Tetratricopeptide repeat D172_012420 PF13184 NusA-like KH domain D172_012420 PF08529 NusA N-terminal domain D172_012420 PF00575 S1 RNA binding domain D172_012440 PF04244 Deoxyribodipyrimidine photo-lyase-related protein D172_012460 PF00011 Hsp20/alpha crystallin family D172_012465 PF00578 AhpC/TSA family D172_012465 PF10417 C-terminal domain of 1-Cys peroxiredoxin D172_012470 PF13276 HTH-like domain D172_012470 PF13333 Integrase core domain D172_012470 PF00665 Integrase core domain D172_012495 PF01527 Transposase D172_012500 PF00665 Integrase core domain D172_012510 PF13683 Integrase core domain D172_012510 PF13276 HTH-like domain D172_012515 PF01527 Transposase D172_012545 PF02254 TrkA-N domain D172_012545 PF02080 TrkA-C domain D172_012545 PF00999 Sodium/hydrogen exchanger family D172_012550 PF03707 Bacterial signalling protein N terminal repeat D172_012550 PF00990 Diguanylate cyclase, GGDEF domain D172_012550 PF00563 EAL domain D172_012560 PF01171 PP-loop family D172_012560 PF09179 TilS substrate binding domain D172_012560 PF11734 TilS substrate C-terminal domain D172_012570 PF01336 OB-fold nucleic acid binding domain D172_012570 PF02811 PHP domain D172_012570 PF07733 Bacterial DNA polymerase III alpha NTPase domain D172_012570 PF14579 Helix-hairpin-helix motif D172_012570 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D172_012585 PF01654 Cytochrome bd terminal oxidase subunit I D172_012590 PF02322 Cytochrome bd terminal oxidase subunit II D172_012595 PF08173 Membrane bound YbgT-like protein D172_012605 PF00005 ABC transporter D172_012605 PF00664 ABC transporter transmembrane region D172_012610 PF00544 Pectate lyase D172_012615 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D172_012615 PF00132 Bacterial transferase hexapeptide (six repeats) D172_012630 PF03938 Outer membrane protein (OmpH-like) D172_012635 PF01103 Surface antigen D172_012635 PF07244 Surface antigen variable number repeat D172_012640 PF02163 Peptidase family M50 D172_012640 PF17820 PDZ domain D172_012645 PF13288 DXP reductoisomerase C-terminal domain D172_012645 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D172_012645 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D172_012655 PF01255 Putative undecaprenyl diphosphate synthase D172_012660 PF01765 Ribosome recycling factor D172_012680 PF00557 Metallopeptidase family M24 D172_012710 PF00351 Biopterin-dependent aromatic amino acid hydroxylase D172_012715 PF01053 Cys/Met metabolism PLP-dependent enzyme D172_012720 PF05128 Domain of unknown function (DUF697) D172_012725 PF04317 YcjX-like family, DUF463 D172_012730 PF04024 PspC domain D172_012735 PF06667 Phage shock protein B D172_012740 PF04012 PspA/IM30 family D172_012745 PF00158 Sigma-54 interaction domain D172_012745 PF02954 Bacterial regulatory protein, Fis family D172_012750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle D172_012755 PF00528 Binding-protein-dependent transport system inner membrane component D172_012760 PF12911 N-terminal TM domain of oligopeptide transport permease C D172_012760 PF00528 Binding-protein-dependent transport system inner membrane component D172_012765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region D172_012765 PF00005 ABC transporter D172_012770 PF00005 ABC transporter D172_012775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D172_012780 PF13145 PPIC-type PPIASE domain D172_012785 PF00216 Bacterial DNA-binding protein D172_012790 PF05362 Lon protease (S16) C-terminal proteolytic domain D172_012790 PF00004 ATPase family associated with various cellular activities (AAA) D172_012790 PF02190 ATP-dependent protease La (LON) substrate-binding domain D172_012795 PF06689 ClpX C4-type zinc finger D172_012795 PF10431 C-terminal, D2-small domain, of ClpB protein D172_012795 PF07724 AAA domain (Cdc48 subfamily) D172_012845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D172_012850 PF12850 Calcineurin-like phosphoesterase superfamily domain D172_012860 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) D172_012870 PF00156 Phosphoribosyl transferase domain D172_012875 PF02674 Colicin V production protein D172_012885 PF02875 Mur ligase family, glutamate ligase domain D172_012885 PF08245 Mur ligase middle domain D172_012905 PF02774 Semialdehyde dehydrogenase, dimerisation domain D172_012905 PF01118 Semialdehyde dehydrogenase, NAD binding domain D172_012915 PF00378 Enoyl-CoA hydratase/isomerase D172_012915 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D172_012915 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D172_012925 PF07726 ATPase family associated with various cellular activities (AAA) D172_012925 PF17863 AAA lid domain D172_012930 PF01882 Protein of unknown function DUF58 D172_012940 PF07584 Aerotolerance regulator N-terminal D172_012940 PF13519 von Willebrand factor type A domain D172_012945 PF13519 von Willebrand factor type A domain D172_012945 PF07584 Aerotolerance regulator N-terminal D172_012955 PF08281 Sigma-70, region 4 D172_012955 PF04542 Sigma-70 region 2 D172_012975 PF13302 Acetyltransferase (GNAT) domain D172_012975 PF13673 Acetyltransferase (GNAT) domain D172_012975 PF03352 Methyladenine glycosylase D172_012975 PF00117 Glutamine amidotransferase class-I D172_012975 PF00958 GMP synthase C terminal domain D172_012985 PF00593 TonB dependent receptor D172_012985 PF07715 TonB-dependent Receptor Plug Domain D172_013010 PF02743 Cache domain D172_013010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_013010 PF00672 HAMP domain D172_013020 PF03840 Preprotein translocase SecG subunit D172_013035 PF00809 Pterin binding enzyme D172_013040 PF01434 Peptidase family M41 D172_013040 PF06480 FtsH Extracellular D172_013040 PF17862 AAA+ lid domain D172_013040 PF00004 ATPase family associated with various cellular activities (AAA) D172_013050 PF01985 CRS1 / YhbY (CRM) domain D172_013060 PF00144 Beta-lactamase D172_013080 PF00486 Transcriptional regulatory protein, C terminal D172_013080 PF00072 Response regulator receiver domain D172_013085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_013085 PF00672 HAMP domain D172_013085 PF16527 Two-component sensor protein CpxA, periplasmic domain D172_013085 PF00512 His Kinase A (phospho-acceptor) domain D172_013090 PF00209 Sodium:neurotransmitter symporter family D172_013095 PF13673 Acetyltransferase (GNAT) domain D172_013100 PF07070 SpoOM protein D172_013105 PF00999 Sodium/hydrogen exchanger family D172_013115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_013115 PF00672 HAMP domain D172_013115 PF00512 His Kinase A (phospho-acceptor) domain D172_013120 PF00486 Transcriptional regulatory protein, C terminal D172_013120 PF00072 Response regulator receiver domain D172_013135 PF00990 Diguanylate cyclase, GGDEF domain D172_013140 PF03466 LysR substrate binding domain D172_013140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_013150 PF02743 Cache domain D172_013150 PF00672 HAMP domain D172_013150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_013155 PF01541 GIY-YIG catalytic domain D172_013160 PF04355 SmpA / OmlA family D172_013170 PF03364 Polyketide cyclase / dehydrase and lipid transport D172_013180 PF00593 TonB dependent receptor D172_013180 PF07715 TonB-dependent Receptor Plug Domain D172_013185 PF00578 AhpC/TSA family D172_013185 PF10417 C-terminal domain of 1-Cys peroxiredoxin D172_013195 PF07840 FadR C-terminal domain D172_013195 PF00392 Bacterial regulatory proteins, gntR family D172_013200 PF06450 Bacterial Na+/H+ antiporter B (NhaB) D172_013220 PF07130 YebG protein D172_013225 PF00474 Sodium:solute symporter family D172_013230 PF00563 EAL domain D172_013230 PF08668 HDOD domain D172_013235 PF04333 MlaA lipoprotein D172_013240 PF03918 Cytochrome C biogenesis protein D172_013245 PF03918 Cytochrome C biogenesis protein D172_013250 PF08534 Redoxin D172_013255 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D172_013255 PF01578 Cytochrome C assembly protein D172_013265 PF04995 Heme exporter protein D (CcmD) D172_013270 PF01578 Cytochrome C assembly protein D172_013275 PF03379 CcmB protein D172_013280 PF00005 ABC transporter D172_013300 PF01584 CheW-like domain D172_013310 PF13614 AAA domain D172_013315 PF00691 OmpA family D172_013315 PF13677 Membrane MotB of proton-channel complex MotA/MotB D172_013320 PF01618 MotA/TolQ/ExbB proton channel family D172_013330 PF07194 P2 response regulator binding domain D172_013330 PF01627 Hpt domain D172_013330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_013330 PF02895 Signal transducing histidine kinase, homodimeric domain D172_013330 PF01584 CheW-like domain D172_013335 PF04344 Chemotaxis phosphatase, CheZ D172_013340 PF00072 Response regulator receiver domain D172_013345 PF04542 Sigma-70 region 2 D172_013345 PF04539 Sigma-70 region 3 D172_013345 PF04545 Sigma-70, region 4 D172_013350 PF10609 NUBPL iron-transfer P-loop NTPase D172_013355 PF00448 SRP54-type protein, GTPase domain D172_013360 PF00771 FHIPEP family D172_013365 PF01312 FlhB HrpN YscU SpaS Family D172_013370 PF01311 Bacterial export proteins, family 1 D172_013375 PF01313 Bacterial export proteins, family 3 D172_013380 PF00813 FliP family D172_013385 PF04347 Flagellar biosynthesis protein, FliO D172_013390 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D172_013395 PF02154 Flagellar motor switch protein FliM D172_013395 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term D172_013400 PF03748 Flagellar basal body-associated protein FliL D172_013405 PF02120 Flagellar hook-length control protein FliK D172_013415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D172_013415 PF18269 T3SS EscN ATPase C-terminal domain D172_013425 PF14841 FliG middle domain D172_013425 PF14842 FliG N-terminal domain D172_013425 PF01706 FliG C-terminal domain D172_013430 PF08345 Flagellar M-ring protein C-terminal D172_013430 PF01514 Secretory protein of YscJ/FliF family D172_013435 PF02049 Flagellar hook-basal body complex protein FliE D172_013440 PF02954 Bacterial regulatory protein, Fis family D172_013440 PF00158 Sigma-54 interaction domain D172_013440 PF00072 Response regulator receiver domain D172_013445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_013445 PF00512 His Kinase A (phospho-acceptor) domain D172_013445 PF00989 PAS fold D172_013450 PF13302 Acetyltransferase (GNAT) domain D172_013450 PF13673 Acetyltransferase (GNAT) domain D172_013450 PF03352 Methyladenine glycosylase D172_013450 PF00117 Glutamine amidotransferase class-I D172_013450 PF00958 GMP synthase C terminal domain D172_013455 PF02954 Bacterial regulatory protein, Fis family D172_013455 PF00072 Response regulator receiver domain D172_013455 PF00158 Sigma-54 interaction domain D172_013470 PF02465 Flagellar hook-associated protein 2 N-terminus D172_013470 PF07195 Flagellar hook-associated protein 2 C-terminus D172_013475 PF03646 FlaG protein D172_013480 PF00700 Bacterial flagellin C-terminal helical region D172_013480 PF07196 Flagellin hook IN motif D172_013480 PF00669 Bacterial flagellin N-terminal helical region D172_013485 PF07196 Flagellin hook IN motif D172_013485 PF00700 Bacterial flagellin C-terminal helical region D172_013485 PF00669 Bacterial flagellin N-terminal helical region D172_013490 PF00700 Bacterial flagellin C-terminal helical region D172_013490 PF00669 Bacterial flagellin N-terminal helical region D172_013490 PF07196 Flagellin hook IN motif D172_013500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D172_013500 PF00460 Flagella basal body rod protein D172_013505 PF10135 Rod binding protein D172_013505 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase D172_013520 PF00460 Flagella basal body rod protein D172_013520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D172_013525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D172_013525 PF00460 Flagella basal body rod protein D172_013530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D172_013530 PF00460 Flagella basal body rod protein D172_013530 PF07559 Flagellar basal body protein FlaE D172_013540 PF00460 Flagella basal body rod protein D172_013540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal D172_013545 PF00460 Flagella basal body rod protein D172_013550 PF01739 CheR methyltransferase, SAM binding domain D172_013550 PF03705 CheR methyltransferase, all-alpha domain D172_013555 PF01584 CheW-like domain D172_013555 PF00072 Response regulator receiver domain D172_013585 PF03466 LysR substrate binding domain D172_013585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_013590 PF00462 Glutaredoxin D172_013590 PF08534 Redoxin D172_013595 PF07992 Pyridine nucleotide-disulphide oxidoreductase D172_013595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D172_013620 PF01555 DNA methylase D172_013655 PF00483 Nucleotidyl transferase D172_013670 PF01925 Sulfite exporter TauE/SafE D172_013675 PF02896 PEP-utilising enzyme, TIM barrel domain D172_013675 PF00391 PEP-utilising enzyme, mobile domain D172_013675 PF05524 PEP-utilising enzyme, N-terminal D172_013675 PF01590 GAF domain D172_013685 PF02976 DNA mismatch repair enzyme MutH D172_013700 PF03819 MazG nucleotide pyrophosphohydrolase domain D172_013705 PF04607 Region found in RelA / SpoT proteins D172_013705 PF02824 TGS domain D172_013705 PF13291 ACT domain D172_013715 PF00072 Response regulator receiver domain D172_013715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D172_013715 PF00672 HAMP domain D172_013715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_013715 PF00512 His Kinase A (phospho-acceptor) domain D172_013715 PF01627 Hpt domain D172_013730 PF01926 50S ribosome-binding GTPase D172_013730 PF07650 KH domain D172_013740 PF10502 Signal peptidase, peptidase S26 D172_013755 PF17188 MucB/RseB C-terminal domain D172_013755 PF03888 MucB/RseB N-terminal domain D172_013765 PF04542 Sigma-70 region 2 D172_013765 PF08281 Sigma-70, region 4 D172_013770 PF02910 Fumarate reductase flavoprotein C-term D172_013770 PF00890 FAD binding domain D172_013780 PF03937 Flavinator of succinate dehydrogenase D172_013785 PF01571 Aminomethyltransferase folate-binding domain D172_013790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D172_013805 PF04269 Protein of unknown function, DUF440 D172_013810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain D172_013810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain D172_013810 PF00378 Enoyl-CoA hydratase/isomerase D172_013820 PF04172 LrgB-like family D172_013825 PF00924 Mechanosensitive ion channel D172_013825 PF05552 Conserved TM helix D172_013830 PF01037 Lrp/AsnC ligand binding domain D172_013835 PF18327 Proline utilization A proline dehydrogenase N-terminal domain D172_013835 PF00171 Aldehyde dehydrogenase family D172_013835 PF01619 Proline dehydrogenase D172_013835 PF14850 DNA-binding domain of Proline dehydrogenase D172_013840 PF11871 Domain of unknown function (DUF3391) D172_013840 PF01966 HD domain D172_013850 PF01471 Putative peptidoglycan binding domain D172_013850 PF13401 AAA domain D172_013875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D172_013880 PF00873 AcrB/AcrD/AcrF family D172_013885 PF01625 Peptide methionine sulfoxide reductase D172_013890 PF00593 TonB dependent receptor D172_013890 PF07715 TonB-dependent Receptor Plug Domain D172_013905 PF02558 Ketopantoate reductase PanE/ApbA D172_013905 PF08546 Ketopantoate reductase PanE/ApbA C terminal D172_013910 PF02568 Thiamine biosynthesis protein (ThiI) D172_013910 PF02926 THUMP domain D172_013915 PF08360 QacR-like protein, C-terminal region D172_013915 PF00440 Bacterial regulatory proteins, tetR family D172_013955 PF00583 Acetyltransferase (GNAT) family D172_013955 PF14698 Argininosuccinate lyase C-terminal D172_013955 PF00206 Lyase D172_013965 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D172_013965 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D172_013970 PF00696 Amino acid kinase family D172_013975 PF01118 Semialdehyde dehydrogenase, NAD binding domain D172_013975 PF02774 Semialdehyde dehydrogenase, dimerisation domain D172_013980 PF07687 Peptidase dimerisation domain D172_013980 PF01546 Peptidase family M20/M25/M40 D172_013985 PF00282 Pyridoxal-dependent decarboxylase conserved domain D172_013990 PF00563 EAL domain D172_013990 PF08495 FIST N domain D172_013990 PF00990 Diguanylate cyclase, GGDEF domain D172_013990 PF10442 FIST C domain D172_013995 PF02390 Putative methyltransferase D172_014000 PF01061 ABC-2 type transporter D172_014005 PF00005 ABC transporter D172_014010 PF02441 Flavoprotein D172_014015 PF02875 Mur ligase family, glutamate ligase domain D172_014015 PF08245 Mur ligase middle domain D172_014015 PF01225 Mur ligase family, catalytic domain D172_014025 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D172_014060 PF03466 LysR substrate binding domain D172_014060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_014080 PF03413 Peptidase propeptide and YPEB domain D172_014080 PF01447 Thermolysin metallopeptidase, catalytic domain D172_014080 PF02868 Thermolysin metallopeptidase, alpha-helical domain D172_014080 PF04151 Bacterial pre-peptidase C-terminal domain D172_014080 PF07504 Fungalysin/Thermolysin Propeptide Motif D172_014110 PF04151 Bacterial pre-peptidase C-terminal domain D172_014110 PF07504 Fungalysin/Thermolysin Propeptide Motif D172_014110 PF01447 Thermolysin metallopeptidase, catalytic domain D172_014110 PF03413 Peptidase propeptide and YPEB domain D172_014110 PF02868 Thermolysin metallopeptidase, alpha-helical domain D172_014115 PF01527 Transposase D172_014120 PF13333 Integrase core domain D172_014120 PF13276 HTH-like domain D172_014120 PF00665 Integrase core domain D172_014130 PF03748 Flagellar basal body-associated protein FliL D172_014135 PF01694 Rhomboid family D172_014135 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease D172_014150 PF00155 Aminotransferase class I and II D172_014160 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D172_014170 PF00534 Glycosyl transferases group 1 D172_014190 PF13580 SIS domain D172_014195 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D172_014205 PF07027 Protein of unknown function (DUF1318) D172_014210 PF13617 YnbE-like lipoprotein D172_014230 PF14437 MafB19-like deaminase D172_014235 PF00294 pfkB family carbohydrate kinase D172_014270 PF00085 Thioredoxin D172_014275 PF07687 Peptidase dimerisation domain D172_014275 PF01546 Peptidase family M20/M25/M40 D172_014280 PF01751 Toprim domain D172_014280 PF01131 DNA topoisomerase D172_014290 PF13677 Membrane MotB of proton-channel complex MotA/MotB D172_014290 PF00691 OmpA family D172_014295 PF01618 MotA/TolQ/ExbB proton channel family D172_014305 PF00348 Polyprenyl synthetase D172_014315 PF00990 Diguanylate cyclase, GGDEF domain D172_014320 PF04608 Phosphatidylglycerophosphatase A D172_014325 PF02769 AIR synthase related protein, C-terminal domain D172_014325 PF00586 AIR synthase related protein, N-terminal domain D172_014340 PF00925 GTP cyclohydrolase II D172_014340 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D172_014345 PF00677 Lumazine binding domain D172_014350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D172_014350 PF01872 RibD C-terminal domain D172_014365 PF00291 Pyridoxal-phosphate dependent enzyme D172_014365 PF14821 Threonine synthase N terminus D172_014370 PF00288 GHMP kinases N terminal domain D172_014370 PF08544 GHMP kinases C terminal D172_014375 PF13840 ACT domain D172_014375 PF03447 Homoserine dehydrogenase, NAD binding domain D172_014375 PF00742 Homoserine dehydrogenase D172_014375 PF00696 Amino acid kinase family D172_014375 PF01842 ACT domain D172_014380 PF00072 Response regulator receiver domain D172_014385 PF00497 Bacterial extracellular solute-binding proteins, family 3 D172_014385 PF00512 His Kinase A (phospho-acceptor) domain D172_014385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_014410 PF01258 Prokaryotic dksA/traR C4-type zinc finger D172_014415 PF00749 tRNA synthetases class I (E and Q), catalytic domain D172_014420 PF01743 Poly A polymerase head domain D172_014420 PF12627 Probable RNA and SrmB- binding site of polymerase A D172_014420 PF12626 Polymerase A arginine-rich C-terminus D172_014425 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D172_014445 PF12849 PBP superfamily domain D172_014450 PF11808 Phosphate regulon sensor protein PhoR D172_014450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_014450 PF00512 His Kinase A (phospho-acceptor) domain D172_014450 PF00989 PAS fold D172_014455 PF00486 Transcriptional regulatory protein, C terminal D172_014455 PF00072 Response regulator receiver domain D172_014460 PF01116 Fructose-bisphosphate aldolase class-II D172_014475 PF00563 EAL domain D172_014475 PF00990 Diguanylate cyclase, GGDEF domain D172_014495 PF00474 Sodium:solute symporter family D172_014505 PF00512 His Kinase A (phospho-acceptor) domain D172_014505 PF00072 Response regulator receiver domain D172_014505 PF01627 Hpt domain D172_014505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_014505 PF00672 HAMP domain D172_014530 PF00990 Diguanylate cyclase, GGDEF domain D172_014550 PF02424 ApbE family D172_014555 PF00593 TonB dependent receptor D172_014555 PF07715 TonB-dependent Receptor Plug Domain D172_014565 PF00873 AcrB/AcrD/AcrF family D172_014570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D172_014570 PF00529 HlyD membrane-fusion protein of T1SS D172_014585 PF12833 Helix-turn-helix domain D172_014590 PF00703 Glycosyl hydrolases family 2 D172_014590 PF02836 Glycosyl hydrolases family 2, TIM barrel domain D172_014590 PF16353 Domain of unknown function(DUF4981) D172_014590 PF02837 Glycosyl hydrolases family 2, sugar binding domain D172_014590 PF02929 Beta galactosidase small chain D172_014595 PF07681 DoxX D172_014600 PF00465 Iron-containing alcohol dehydrogenase D172_014605 PF06719 AraC-type transcriptional regulator N-terminus D172_014605 PF12833 Helix-turn-helix domain D172_014625 PF04116 Fatty acid hydroxylase superfamily D172_014635 PF12833 Helix-turn-helix domain D172_014635 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D172_014655 PF00293 NUDIX domain D172_014660 PF00501 AMP-binding enzyme D172_014660 PF16177 Acetyl-coenzyme A synthetase N-terminus D172_014660 PF13193 AMP-binding enzyme C-terminal domain D172_014680 PF01527 Transposase D172_014685 PF00665 Integrase core domain D172_014685 PF13276 HTH-like domain D172_014685 PF13333 Integrase core domain D172_014695 PF12679 ABC-2 family transporter protein D172_014700 PF00005 ABC transporter D172_014710 PF07702 UTRA domain D172_014710 PF00392 Bacterial regulatory proteins, gntR family D172_014715 PF00005 ABC transporter D172_014740 PF07715 TonB-dependent Receptor Plug Domain D172_014745 PF03150 Di-haem cytochrome c peroxidase D172_014750 PF03466 LysR substrate binding domain D172_014750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_014755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D172_014765 PF04828 Glutathione-dependent formaldehyde-activating enzyme D172_014770 PF00199 Catalase D172_014770 PF06628 Catalase-related immune-responsive D172_014770 PF18011 C-terminal domain found in long catalases D172_014775 PF05552 Conserved TM helix D172_014775 PF00924 Mechanosensitive ion channel D172_014785 PF05257 CHAP domain D172_014785 PF03738 Glutathionylspermidine synthase preATP-grasp D172_014795 PF00210 Ferritin-like domain D172_014815 PF00196 Bacterial regulatory proteins, luxR family D172_014815 PF00072 Response regulator receiver domain D172_014820 PF07730 Histidine kinase D172_014830 PF03009 Glycerophosphoryl diester phosphodiesterase family D172_014835 PF00672 HAMP domain D172_014835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_014835 PF12729 Four helix bundle sensory module for signal transduction D172_014840 PF08331 Domain of unknown function (DUF1730) D172_014845 PF00072 Response regulator receiver domain D172_014850 PF13188 PAS domain D172_014850 PF00989 PAS fold D172_014850 PF13426 PAS domain D172_014850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_014850 PF00512 His Kinase A (phospho-acceptor) domain D172_014855 PF00583 Acetyltransferase (GNAT) family D172_014860 PF00255 Glutathione peroxidase D172_014880 PF01433 Peptidase family M1 domain D172_014880 PF11838 ERAP1-like C-terminal domain D172_014895 PF00485 Phosphoribulokinase / Uridine kinase family D172_014900 PF01931 Protein of unknown function DUF84 D172_014905 PF13419 Haloacid dehalogenase-like hydrolase D172_014915 PF12327 FtsZ family, C-terminal domain D172_014915 PF00091 Tubulin/FtsZ family, GTPase domain D172_014920 PF02491 SHS2 domain inserted in FTSA D172_014925 PF03799 Cell division protein FtsQ D172_014925 PF08478 POTRA domain, FtsQ-type D172_014960 PF01225 Mur ligase family, catalytic domain D172_014960 PF02875 Mur ligase family, glutamate ligase domain D172_014960 PF08245 Mur ligase middle domain D172_014965 PF01225 Mur ligase family, catalytic domain D172_014965 PF02875 Mur ligase family, glutamate ligase domain D172_014965 PF08245 Mur ligase middle domain D172_014970 PF03717 Penicillin-binding Protein dimerisation domain D172_014970 PF00905 Penicillin binding protein transpeptidase domain D172_014975 PF04999 Cell division protein FtsL D172_015005 PF13409 Glutathione S-transferase, N-terminal domain D172_015010 PF05726 Pirin C-terminal cupin domain D172_015010 PF02678 Pirin D172_015020 PF03631 Virulence factor BrkB D172_015040 PF00696 Amino acid kinase family D172_015040 PF01842 ACT domain D172_015040 PF13840 ACT domain D172_015050 PF02631 RecX family D172_015060 PF00925 GTP cyclohydrolase II D172_015075 PF01370 NAD dependent epimerase/dehydratase family D172_015080 PF18331 PKHD-type hydroxylase C-terminal domain D172_015080 PF13640 2OG-Fe(II) oxygenase superfamily D172_015085 PF00593 TonB dependent receptor D172_015085 PF07715 TonB-dependent Receptor Plug Domain D172_015095 PF01618 MotA/TolQ/ExbB proton channel family D172_015100 PF01618 MotA/TolQ/ExbB proton channel family D172_015105 PF02472 Biopolymer transport protein ExbD/TolR D172_015120 PF03969 AFG1-like ATPase D172_015125 PF00849 RNA pseudouridylate synthase D172_015125 PF01479 S4 domain D172_015155 PF00581 Rhodanese-like domain D172_015160 PF01467 Cytidylyltransferase-like D172_015165 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase D172_015180 PF03707 Bacterial signalling protein N terminal repeat D172_015180 PF00563 EAL domain D172_015180 PF00990 Diguanylate cyclase, GGDEF domain D172_015190 PF01259 SAICAR synthetase D172_015195 PF00005 ABC transporter D172_015215 PF01467 Cytidylyltransferase-like D172_015220 PF00462 Glutaredoxin D172_015220 PF08534 Redoxin D172_015235 PF00483 Nucleotidyl transferase D172_015240 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D172_015240 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D172_015240 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D172_015245 PF02719 Polysaccharide biosynthesis protein D172_015250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D172_015260 PF02397 Bacterial sugar transferase D172_015270 PF01757 Acyltransferase family D172_015300 PF08666 SAF domain D172_015300 PF03102 NeuB family D172_015315 PF00248 Aldo/keto reductase family D172_015320 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family D172_015325 PF02719 Polysaccharide biosynthesis protein D172_015330 PF13614 AAA domain D172_015330 PF02706 Chain length determinant protein D172_015330 PF13807 G-rich domain on putative tyrosine kinase D172_015335 PF01451 Low molecular weight phosphotyrosine protein phosphatase D172_015340 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D172_015340 PF02563 Polysaccharide biosynthesis/export protein D172_015340 PF10531 SLBB domain D172_015345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D172_015345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D172_015345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D172_015345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D172_015350 PF01050 Mannose-6-phosphate isomerase D172_015350 PF00483 Nucleotidyl transferase D172_015355 PF00534 Glycosyl transferases group 1 D172_015360 PF00534 Glycosyl transferases group 1 D172_015360 PF13439 Glycosyltransferase Family 4 D172_015375 PF00132 Bacterial transferase hexapeptide (six repeats) D172_015380 PF00132 Bacterial transferase hexapeptide (six repeats) D172_015395 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D172_015400 PF00483 Nucleotidyl transferase D172_015405 PF16363 GDP-mannose 4,6 dehydratase D172_015410 PF02397 Bacterial sugar transferase D172_015420 PF02563 Polysaccharide biosynthesis/export protein D172_015420 PF10531 SLBB domain D172_015420 PF18412 Outer-membrane lipoprotein Wza C-terminal domain D172_015425 PF04338 Protein of unknown function, DUF481 D172_015430 PF05552 Conserved TM helix D172_015430 PF00924 Mechanosensitive ion channel D172_015455 PF12706 Beta-lactamase superfamily domain D172_015460 PF00211 Adenylate and Guanylate cyclase catalytic domain D172_015465 PF01966 HD domain D172_015475 PF00171 Aldehyde dehydrogenase family D172_015480 PF00111 2Fe-2S iron-sulfur cluster binding domain D172_015490 PF07743 HSCB C-terminal oligomerisation domain D172_015495 PF01521 Iron-sulphur cluster biosynthesis D172_015500 PF01592 NifU-like N terminal domain D172_015510 PF02082 Transcriptional regulator D172_015515 PF00588 SpoU rRNA Methylase family D172_015520 PF00356 Bacterial regulatory proteins, lacI family D172_015525 PF01306 LacY proton/sugar symporter D172_015530 PF08244 Glycosyl hydrolases family 32 C terminal D172_015530 PF00251 Glycosyl hydrolases family 32 N-terminal domain D172_015535 PF00083 Sugar (and other) transporter D172_015545 PF07715 TonB-dependent Receptor Plug Domain D172_015545 PF00593 TonB dependent receptor D172_015555 PF00072 Response regulator receiver domain D172_015555 PF00486 Transcriptional regulatory protein, C terminal D172_015560 PF01432 Peptidase family M3 D172_015570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D172_015570 PF07992 Pyridine nucleotide-disulphide oxidoreductase D172_015690 PF01434 Peptidase family M41 D172_015690 PF17862 AAA+ lid domain D172_015690 PF00004 ATPase family associated with various cellular activities (AAA) D172_015715 PF01523 Putative modulator of DNA gyrase D172_015720 PF00795 Carbon-nitrogen hydrolase D172_015725 PF13502 AsmA-like C-terminal region D172_015725 PF13116 Protein of unknown function D172_015730 PF00575 S1 RNA binding domain D172_015730 PF10150 Ribonuclease E/G family D172_015740 PF04093 rod shape-determining protein MreD D172_015745 PF04085 rod shape-determining protein MreC D172_015760 PF00291 Pyridoxal-phosphate dependent enzyme D172_015770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_015770 PF00072 Response regulator receiver domain D172_015770 PF09308 LuxQ, periplasmic D172_015770 PF00512 His Kinase A (phospho-acceptor) domain D172_015775 PF00436 Single-strand binding protein family D172_015780 PF07690 Major Facilitator Superfamily D172_015785 PF17755 UvrA DNA-binding domain D172_015785 PF17760 UvrA interaction domain D172_015785 PF00005 ABC transporter D172_015790 PF00072 Response regulator receiver domain D172_015790 PF00486 Transcriptional regulatory protein, C terminal D172_015805 PF00579 tRNA synthetases class I (W and Y) D172_015810 PF13419 Haloacid dehalogenase-like hydrolase D172_015815 PF00834 Ribulose-phosphate 3 epimerase family D172_015825 PF02086 D12 class N6 adenine-specific DNA methyltransferase D172_015830 PF05036 Sporulation related domain D172_015845 PF03958 Bacterial type II/III secretion system short domain D172_015845 PF00263 Bacterial type II and III secretion system protein D172_015845 PF07660 Secretin and TonB N terminus short domain D172_015845 PF11741 AMIN domain D172_015870 PF17092 Penicillin-binding protein OB-like domain D172_015870 PF00912 Transglycosylase D172_015870 PF00905 Penicillin binding protein transpeptidase domain D172_015875 PF00742 Homoserine dehydrogenase D172_015875 PF00696 Amino acid kinase family D172_015875 PF03447 Homoserine dehydrogenase, NAD binding domain D172_015880 PF01053 Cys/Met metabolism PLP-dependent enzyme D172_015890 PF03949 Malic enzyme, NAD binding domain D172_015890 PF00390 Malic enzyme, N-terminal domain D172_015900 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D172_015900 PF00270 DEAD/DEAH box helicase D172_015900 PF00271 Helicase conserved C-terminal domain D172_015900 PF17764 3′ DNA-binding domain (3′BD) D172_015900 PF18074 Primosomal protein N C-terminal domain D172_015925 PF12729 Four helix bundle sensory module for signal transduction D172_015925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_015925 PF00672 HAMP domain D172_015935 PF01569 PAP2 superfamily D172_015950 PF03707 Bacterial signalling protein N terminal repeat D172_015950 PF00990 Diguanylate cyclase, GGDEF domain D172_015950 PF00563 EAL domain D172_015960 PF00392 Bacterial regulatory proteins, gntR family D172_015960 PF07702 UTRA domain D172_015970 PF00221 Aromatic amino acid lyase D172_015975 PF01370 NAD dependent epimerase/dehydratase family D172_015985 PF00293 NUDIX domain D172_015990 PF01636 Phosphotransferase enzyme family D172_015995 PF05649 Peptidase family M13 D172_015995 PF01431 Peptidase family M13 D172_016005 PF01523 Putative modulator of DNA gyrase D172_016010 PF04751 Protein of unknown function (DUF615) D172_016015 PF06969 HemN C-terminal domain D172_016015 PF04055 Radical SAM superfamily D172_016020 PF10675 Protein of unknown function (DUF2489) D172_016030 PF00034 Cytochrome c D172_016050 PF01367 5'-3' exonuclease, C-terminal SAM fold D172_016050 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D172_016050 PF00476 DNA polymerase family A D172_016050 PF01612 3'-5' exonuclease D172_016060 PF13442 Cytochrome C oxidase, cbb3-type, subunit III D172_016065 PF00563 EAL domain D172_016065 PF00990 Diguanylate cyclase, GGDEF domain D172_016065 PF03707 Bacterial signalling protein N terminal repeat D172_016070 PF13361 UvrD-like helicase C-terminal domain D172_016070 PF00580 UvrD/REP helicase N-terminal domain D172_016075 PF04380 Membrane fusogenic activity D172_016080 PF13460 NAD(P)H-binding D172_016085 PF00484 Carbonic anhydrase D172_016100 PF00585 C-terminal regulatory domain of Threonine dehydratase D172_016100 PF00291 Pyridoxal-phosphate dependent enzyme D172_016115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D172_016115 PF00205 Thiamine pyrophosphate enzyme, central domain D172_016115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D172_016120 PF00884 Sulfatase D172_016120 PF08019 Phosphoethanolamine transferase EptA/EptB D172_016125 PF01219 Prokaryotic diacylglycerol kinase D172_016130 PF00884 Sulfatase D172_016135 PF00072 Response regulator receiver domain D172_016135 PF00486 Transcriptional regulatory protein, C terminal D172_016140 PF00672 HAMP domain D172_016140 PF00512 His Kinase A (phospho-acceptor) domain D172_016140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_016165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D172_016165 PF18029 Glyoxalase-like domain D172_016210 PF00444 Ribosomal protein L36 D172_016215 PF00344 SecY translocase D172_016300 PF06291 Bor protein D172_016310 PF00005 ABC transporter D172_016320 PF01022 Bacterial regulatory protein, arsR family D172_016350 PF17967 Pullulanase N2 domain D172_016350 PF18494 Pullulanase Ins domain D172_016350 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D172_016350 PF03714 Bacterial pullanase-associated domain D172_016350 PF11852 Domain of unknown function (DUF3372) D172_016360 PF01810 LysE type translocator D172_016370 PF00005 ABC transporter D172_016370 PF00664 ABC transporter transmembrane region D172_016390 PF00924 Mechanosensitive ion channel D172_016395 PF01553 Acyltransferase D172_016400 PF01553 Acyltransferase D172_016405 PF17944 Arginine decarboxylase C-terminal helical extension D172_016405 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D172_016405 PF17810 Arginine decarboxylase helical bundle domain D172_016410 PF17284 Spermidine synthase tetramerisation domain D172_016415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_016415 PF00672 HAMP domain D172_016415 PF02743 Cache domain D172_016430 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation D172_016430 PF14508 Glycosyl-hydrolase 97 N-terminal D172_016430 PF10566 Glycoside hydrolase 97 D172_016440 PF01494 FAD binding domain D172_016450 PF00512 His Kinase A (phospho-acceptor) domain D172_016450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_016450 PF00672 HAMP domain D172_016455 PF00486 Transcriptional regulatory protein, C terminal D172_016455 PF00072 Response regulator receiver domain D172_016460 PF01272 Transcription elongation factor, GreA/GreB, C-term D172_016460 PF03449 Transcription elongation factor, N-terminal D172_016475 PF17674 HHH domain D172_016475 PF16921 Tex protein YqgF-like domain D172_016475 PF00575 S1 RNA binding domain D172_016475 PF09371 Tex-like protein N-terminal domain D172_016490 PF00561 alpha/beta hydrolase fold D172_016495 PF00156 Phosphoribosyl transferase domain D172_016515 PF01554 MatE D172_016520 PF01522 Polysaccharide deacetylase D172_016530 PF03975 CheD chemotactic sensory transduction D172_016535 PF01739 CheR methyltransferase, SAM binding domain D172_016535 PF03705 CheR methyltransferase, all-alpha domain D172_016540 PF13426 PAS domain D172_016540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_016540 PF08447 PAS fold D172_016540 PF08447 PAS fold D172_016540 PF13426 PAS domain D172_016540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_016545 PF01584 CheW-like domain D172_016550 PF02895 Signal transducing histidine kinase, homodimeric domain D172_016550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_016550 PF01627 Hpt domain D172_016550 PF09078 CheY binding D172_016550 PF01584 CheW-like domain D172_016555 PF00072 Response regulator receiver domain D172_016575 PF02628 Cytochrome oxidase assembly protein D172_016590 PF00510 Cytochrome c oxidase subunit III D172_016595 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 D172_016600 PF00115 Cytochrome C and Quinol oxidase polypeptide I D172_016605 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D172_016605 PF02790 Cytochrome C oxidase subunit II, transmembrane domain D172_016610 PF01726 LexA DNA binding domain D172_016610 PF00717 Peptidase S24-like D172_016620 PF03061 Thioesterase superfamily D172_016635 PF04231 Endonuclease I D172_016640 PF00175 Oxidoreductase NAD-binding domain D172_016640 PF00970 Oxidoreductase FAD-binding domain D172_016640 PF00042 Globin D172_016650 PF00158 Sigma-54 interaction domain D172_016650 PF01590 GAF domain D172_016655 PF03466 LysR substrate binding domain D172_016655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_016660 PF03358 NADPH-dependent FMN reductase D172_016705 PF00682 HMGL-like D172_016705 PF08502 LeuA allosteric (dimerisation) domain D172_016710 PF00440 Bacterial regulatory proteins, tetR family D172_016720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D172_016720 PF07992 Pyridine nucleotide-disulphide oxidoreductase D172_016730 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ D172_016735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D172_016735 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D172_016750 PF09526 Probable metal-binding protein (DUF2387) D172_016755 PF12848 ABC transporter D172_016755 PF00005 ABC transporter D172_016765 PF00561 alpha/beta hydrolase fold D172_016770 PF06794 Uncharacterised protein family (UPF0270) D172_016810 PF08279 HTH domain D172_016810 PF03099 Biotin/lipoate A/B protein ligase family D172_016810 PF02237 Biotin protein ligase C terminal domain D172_016820 PF01433 Peptidase family M1 domain D172_016830 PF01230 HIT domain D172_016840 PF00512 His Kinase A (phospho-acceptor) domain D172_016840 PF01627 Hpt domain D172_016840 PF00072 Response regulator receiver domain D172_016840 PF17149 Periplasmic sensor domain found in signal transduction proteins D172_016840 PF00672 HAMP domain D172_016840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_016860 PF01050 Mannose-6-phosphate isomerase D172_016860 PF00483 Nucleotidyl transferase D172_016865 PF00483 Nucleotidyl transferase D172_016865 PF01050 Mannose-6-phosphate isomerase D172_016870 PF00795 Carbon-nitrogen hydrolase D172_016875 PF00155 Aminotransferase class I and II D172_016890 PF03079 ARD/ARD' family D172_016895 PF01008 Initiation factor 2 subunit family D172_016900 PF01636 Phosphotransferase enzyme family D172_016905 PF01645 Conserved region in glutamate synthase D172_016930 PF03109 ABC1 family D172_016940 PF02416 mttA/Hcf106 family D172_016945 PF00902 Sec-independent protein translocase protein (TatC) D172_016955 PF01026 TatD related DNase D172_016960 PF01590 GAF domain D172_016960 PF00563 EAL domain D172_016960 PF00990 Diguanylate cyclase, GGDEF domain D172_016960 PF00360 Phytochrome region D172_016965 PF00490 Delta-aminolevulinic acid dehydratase D172_016975 PF04349 Periplasmic glucan biosynthesis protein, MdoG D172_016980 PF00535 Glycosyl transferase family 2 D172_017000 PF01527 Transposase D172_017005 PF00665 Integrase core domain D172_017030 PF01926 50S ribosome-binding GTPase D172_017035 PF07152 YaeQ protein D172_017050 PF00210 Ferritin-like domain D172_017055 PF00593 TonB dependent receptor D172_017055 PF07715 TonB-dependent Receptor Plug Domain D172_017070 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D172_017070 PF00326 Prolyl oligopeptidase family D172_017075 PF18416 N-acetylglucosamine binding protein domain 2 D172_017075 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading D172_017085 PF03591 AzlC protein D172_017095 PF00255 Glutathione peroxidase D172_017110 PF00392 Bacterial regulatory proteins, gntR family D172_017110 PF00155 Aminotransferase class I and II D172_017135 PF00266 Aminotransferase class-V D172_017140 PF08933 Domain of unknown function (DUF1864) D172_017145 PF01037 Lrp/AsnC ligand binding domain D172_017150 PF01627 Hpt domain D172_017150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_017150 PF00072 Response regulator receiver domain D172_017150 PF00512 His Kinase A (phospho-acceptor) domain D172_017150 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) D172_017150 PF00672 HAMP domain D172_017180 PF10415 Fumarase C C-terminus D172_017180 PF00206 Lyase D172_017265 PF04191 Phospholipid methyltransferase D172_017270 PF00990 Diguanylate cyclase, GGDEF domain D172_017270 PF03707 Bacterial signalling protein N terminal repeat D172_017270 PF00563 EAL domain D172_017280 PF00593 TonB dependent receptor D172_017280 PF07715 TonB-dependent Receptor Plug Domain D172_017290 PF00990 Diguanylate cyclase, GGDEF domain D172_017290 PF00563 EAL domain D172_017290 PF03707 Bacterial signalling protein N terminal repeat D172_017295 PF03466 LysR substrate binding domain D172_017295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_017300 PF13460 NAD(P)H-binding D172_017310 PF02146 Sir2 family D172_017315 PF00072 Response regulator receiver domain D172_017325 PF00665 Integrase core domain D172_017325 PF13276 HTH-like domain D172_017325 PF13333 Integrase core domain D172_017330 PF01527 Transposase D172_017340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_017340 PF03466 LysR substrate binding domain D172_017345 PF07687 Peptidase dimerisation domain D172_017345 PF01546 Peptidase family M20/M25/M40 D172_017355 PF01527 Transposase D172_017360 PF00665 Integrase core domain D172_017380 PF13683 Integrase core domain D172_017380 PF13276 HTH-like domain D172_017385 PF01527 Transposase D172_017405 PF00665 Integrase core domain D172_017410 PF00665 Integrase core domain D172_017410 PF13936 Helix-turn-helix domain D172_017415 PF01527 Transposase D172_017430 PF00106 short chain dehydrogenase D172_017435 PF05552 Conserved TM helix D172_017435 PF00924 Mechanosensitive ion channel D172_017445 PF07995 Glucose / Sorbosone dehydrogenase D172_017460 PF01047 MarR family D172_017465 PF02566 OsmC-like protein D172_017470 PF01022 Bacterial regulatory protein, arsR family D172_017475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D172_017475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D172_017485 PF00672 HAMP domain D172_017485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_017515 PF03793 PASTA domain D172_017515 PF00069 Protein kinase domain D172_017535 PF00691 OmpA family D172_017535 PF13677 Membrane MotB of proton-channel complex MotA/MotB D172_017595 PF10431 C-terminal, D2-small domain, of ClpB protein D172_017595 PF17871 AAA lid domain D172_017595 PF00004 ATPase family associated with various cellular activities (AAA) D172_017595 PF07724 AAA domain (Cdc48 subfamily) D172_017605 PF04717 Type VI secretion system, phage-baseplate injector D172_017685 PF09278 MerR, DNA binding D172_017685 PF00376 MerR family regulatory protein D172_017705 PF12792 CSS motif domain associated with EAL D172_017705 PF00563 EAL domain D172_017725 PF00356 Bacterial regulatory proteins, lacI family D172_017735 PF01204 Trehalase D172_017740 PF00196 Bacterial regulatory proteins, luxR family D172_017745 PF03783 Curli production assembly/transport component CsgG D172_017765 PF00082 Subtilase family D172_017780 PF01979 Amidohydrolase family D172_017785 PF00576 HIUase/Transthyretin family D172_017800 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D172_017800 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain D172_017805 PF03450 CO dehydrogenase flavoprotein C-terminal domain D172_017805 PF00941 FAD binding domain in molybdopterin dehydrogenase D172_017820 PF03458 UPF0126 domain D172_017830 PF00939 Sodium:sulfate symporter transmembrane region D172_017845 PF01609 Transposase DDE domain D172_017845 PF13808 DDE_Tnp_1-associated D172_017865 PF01548 Transposase D172_017865 PF02371 Transposase IS116/IS110/IS902 family D172_017910 PF06906 Protein of unknown function (DUF1272) D172_017920 PF07687 Peptidase dimerisation domain D172_017920 PF01546 Peptidase family M20/M25/M40 D172_017925 PF00266 Aminotransferase class-V D172_017930 PF01925 Sulfite exporter TauE/SafE D172_017940 PF01425 Amidase D172_017945 PF03737 Aldolase/RraA D172_017950 PF08362 YcdC-like protein, C-terminal region D172_017950 PF00440 Bacterial regulatory proteins, tetR family D172_017955 PF00892 EamA-like transporter family D172_017965 PF06628 Catalase-related immune-responsive D172_017965 PF00199 Catalase D172_017970 PF13419 Haloacid dehalogenase-like hydrolase D172_017985 PF01232 Mannitol dehydrogenase Rossmann domain D172_017985 PF08125 Mannitol dehydrogenase C-terminal domain D172_017990 PF00294 pfkB family carbohydrate kinase D172_017995 PF02554 Carbon starvation protein CstA D172_018020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_018020 PF03466 LysR substrate binding domain D172_018040 PF00294 pfkB family carbohydrate kinase D172_018050 PF07690 Major Facilitator Superfamily D172_018055 PF00128 Alpha amylase, catalytic domain D172_018060 PF00356 Bacterial regulatory proteins, lacI family D172_018065 PF12833 Helix-turn-helix domain D172_018065 PF14525 AraC-binding-like domain D172_018070 PF00171 Aldehyde dehydrogenase family D172_018105 PF01527 Transposase D172_018110 PF13333 Integrase core domain D172_018110 PF00665 Integrase core domain D172_018110 PF13276 HTH-like domain D172_018115 PF01527 Transposase D172_018120 PF00665 Integrase core domain D172_018150 PF00106 short chain dehydrogenase D172_018155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_018155 PF03466 LysR substrate binding domain D172_018170 PF00722 Glycosyl hydrolases family 16 D172_018190 PF01066 CDP-alcohol phosphatidyltransferase D172_018195 PF00005 ABC transporter D172_018205 PF13416 Bacterial extracellular solute-binding protein D172_018215 PF07992 Pyridine nucleotide-disulphide oxidoreductase D172_018215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D172_018250 PF00990 Diguanylate cyclase, GGDEF domain D172_018250 PF00072 Response regulator receiver domain D172_018255 PF00849 RNA pseudouridylate synthase D172_018260 PF00205 Thiamine pyrophosphate enzyme, central domain D172_018260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D172_018260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D172_018280 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family D172_018280 PF00356 Bacterial regulatory proteins, lacI family D172_018290 PF01810 LysE type translocator D172_018305 PF00294 pfkB family carbohydrate kinase D172_018310 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus D172_018310 PF08666 SAF domain D172_018315 PF01232 Mannitol dehydrogenase Rossmann domain D172_018315 PF08125 Mannitol dehydrogenase C-terminal domain D172_018325 PF04962 KduI/IolB family D172_018330 PF03480 Bacterial extracellular solute-binding protein, family 7 D172_018335 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component D172_018340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component D172_018345 PF00356 Bacterial regulatory proteins, lacI family D172_018355 PF04616 Glycosyl hydrolases family 43 D172_018355 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain D172_018360 PF07470 Glycosyl Hydrolase Family 88 D172_018365 PF07470 Glycosyl Hydrolase Family 88 D172_018370 PF02614 Glucuronate isomerase D172_018375 PF01081 KDPG and KHG aldolase D172_018380 PF00295 Glycosyl hydrolases family 28 D172_018390 PF13472 GDSL-like Lipase/Acylhydrolase family D172_018400 PF17755 UvrA DNA-binding domain D172_018410 PF00589 Phage integrase family D172_018410 PF13495 Phage integrase, N-terminal SAM-like domain D172_018415 PF14319 Transposase zinc-binding domain D172_018415 PF04986 Putative transposase D172_018420 PF17755 UvrA DNA-binding domain D172_018465 PF13181 Tetratricopeptide repeat D172_018470 PF00593 TonB dependent receptor D172_018470 PF07715 TonB-dependent Receptor Plug Domain D172_018475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D172_018480 PF07690 Major Facilitator Superfamily D172_018485 PF00892 EamA-like transporter family D172_018490 PF00392 Bacterial regulatory proteins, gntR family D172_018490 PF07729 FCD domain D172_018495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain D172_018495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold D172_018500 PF12833 Helix-turn-helix domain D172_018500 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term D172_018505 PF05199 GMC oxidoreductase D172_018505 PF00732 GMC oxidoreductase D172_018525 PF10417 C-terminal domain of 1-Cys peroxiredoxin D172_018525 PF00578 AhpC/TSA family D172_018530 PF07992 Pyridine nucleotide-disulphide oxidoreductase D172_018530 PF13192 Thioredoxin domain D172_018540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_018540 PF00072 Response regulator receiver domain D172_018540 PF09308 LuxQ, periplasmic D172_018540 PF00512 His Kinase A (phospho-acceptor) domain D172_018565 PF01734 Patatin-like phospholipase D172_018580 PF01145 SPFH domain / Band 7 family D172_018585 PF01545 Cation efflux family D172_018585 PF16916 Dimerisation domain of Zinc Transporter D172_018590 PF03707 Bacterial signalling protein N terminal repeat D172_018590 PF00990 Diguanylate cyclase, GGDEF domain D172_018590 PF00563 EAL domain D172_018600 PF12729 Four helix bundle sensory module for signal transduction D172_018600 PF00672 HAMP domain D172_018600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_018610 PF00593 TonB dependent receptor D172_018610 PF07715 TonB-dependent Receptor Plug Domain D172_018615 PF01169 Uncharacterized protein family UPF0016 D172_018630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_018630 PF03466 LysR substrate binding domain D172_018655 PF04324 BFD-like [2Fe-2S] binding domain D172_018660 PF00210 Ferritin-like domain D172_018665 PF00210 Ferritin-like domain D172_018670 PF00593 TonB dependent receptor D172_018670 PF07715 TonB-dependent Receptor Plug Domain D172_018680 PF16916 Dimerisation domain of Zinc Transporter D172_018680 PF01545 Cation efflux family D172_018690 PF00583 Acetyltransferase (GNAT) family D172_018700 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D172_018700 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D172_018705 PF12833 Helix-turn-helix domain D172_018705 PF02805 Metal binding domain of Ada D172_018705 PF06029 AlkA N-terminal domain D172_018705 PF00730 HhH-GPD superfamily base excision DNA repair protein D172_018710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D172_018710 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D172_018720 PF01212 Beta-eliminating lyase D172_018735 PF13181 Tetratricopeptide repeat D172_018750 PF02789 Cytosol aminopeptidase family, N-terminal domain D172_018750 PF00883 Cytosol aminopeptidase family, catalytic domain D172_018755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D172_018780 PF00072 Response regulator receiver domain D172_018795 PF03466 LysR substrate binding domain D172_018795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_018825 PF01321 Creatinase/Prolidase N-terminal domain D172_018825 PF00557 Metallopeptidase family M24 D172_018855 PF01048 Phosphorylase superfamily D172_018860 PF00491 Arginase family D172_018870 PF01595 Cyclin M transmembrane N-terminal domain D172_018870 PF03471 Transporter associated domain D172_018870 PF00571 CBS domain D172_018875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D172_018875 PF00529 HlyD membrane-fusion protein of T1SS D172_018880 PF00873 AcrB/AcrD/AcrF family D172_018885 PF02321 Outer membrane efflux protein D172_018895 PF02142 MGS-like domain D172_018895 PF00781 Diacylglycerol kinase catalytic domain D172_018900 PF09905 DNA-binding protein VF530 D172_018915 PF14497 Glutathione S-transferase, C-terminal domain D172_018915 PF02798 Glutathione S-transferase, N-terminal domain D172_018920 PF04209 homogentisate 1,2-dioxygenase D172_018925 PF01047 MarR family D172_018935 PF00593 TonB dependent receptor D172_018955 PF00149 Calcineurin-like phosphoesterase D172_018955 PF02872 5'-nucleotidase, C-terminal domain D172_018965 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D172_018975 PF16187 Middle or third domain of peptidase_M16 D172_018975 PF05193 Peptidase M16 inactive domain D172_018975 PF00675 Insulinase (Peptidase family M16) D172_018985 PF00722 Glycosyl hydrolases family 16 D172_018995 PF02470 MlaD protein D172_019000 PF04403 Paraquat-inducible protein A D172_019020 PF04073 Aminoacyl-tRNA editing domain D172_019040 PF00512 His Kinase A (phospho-acceptor) domain D172_019040 PF02743 Cache domain D172_019040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_019045 PF02954 Bacterial regulatory protein, Fis family D172_019045 PF00072 Response regulator receiver domain D172_019045 PF00158 Sigma-54 interaction domain D172_019050 PF00267 Gram-negative porin D172_019055 PF00939 Sodium:sulfate symporter transmembrane region D172_019060 PF00171 Aldehyde dehydrogenase family D172_019075 PF13478 XdhC Rossmann domain D172_019075 PF02625 XdhC and CoxI family D172_019080 PF12804 MobA-like NTP transferase domain D172_019085 PF00111 2Fe-2S iron-sulfur cluster binding domain D172_019085 PF01799 [2Fe-2S] binding domain D172_019090 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase D172_019095 PF06463 Molybdenum Cofactor Synthesis C D172_019095 PF04055 Radical SAM superfamily D172_019100 PF00990 Diguanylate cyclase, GGDEF domain D172_019105 PF03466 LysR substrate binding domain D172_019105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_019110 PF13533 Biotin-lipoyl like D172_019115 PF00873 AcrB/AcrD/AcrF family D172_019120 PF02321 Outer membrane efflux protein D172_019125 PF00107 Zinc-binding dehydrogenase D172_019125 PF08240 Alcohol dehydrogenase GroES-like domain D172_019130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D172_019130 PF02770 Acyl-CoA dehydrogenase, middle domain D172_019130 PF09317 Domain of unknown function (DUF1974) D172_019130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D172_019135 PF00589 Phage integrase family D172_019135 PF13495 Phage integrase, N-terminal SAM-like domain D172_019140 PF00589 Phage integrase family D172_019140 PF13495 Phage integrase, N-terminal SAM-like domain D172_019145 PF04986 Putative transposase D172_019145 PF14319 Transposase zinc-binding domain D172_019165 PF13936 Helix-turn-helix domain D172_019190 PF00860 Permease family D172_019205 PF00128 Alpha amylase, catalytic domain D172_019225 PF01197 Ribosomal protein L31 D172_019240 PF03466 LysR substrate binding domain D172_019240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_019245 PF07690 Major Facilitator Superfamily D172_019250 PF00248 Aldo/keto reductase family D172_019285 PF00701 Dihydrodipicolinate synthetase family D172_019300 PF00550 Phosphopantetheine attachment site D172_019305 PF00550 Phosphopantetheine attachment site D172_019335 PF00221 Aromatic amino acid lyase D172_019355 PF04820 Tryptophan halogenase D172_019365 PF02801 Beta-ketoacyl synthase, C-terminal domain D172_019365 PF00109 Beta-ketoacyl synthase, N-terminal domain D172_019380 PF02801 Beta-ketoacyl synthase, C-terminal domain D172_019380 PF00109 Beta-ketoacyl synthase, N-terminal domain D172_019385 PF00271 Helicase conserved C-terminal domain D172_019385 PF00270 DEAD/DEAH box helicase D172_019395 PF00037 4Fe-4S binding domain D172_019395 PF11953 Domain of unknown function (DUF3470) D172_019405 PF00990 Diguanylate cyclase, GGDEF domain D172_019405 PF00563 EAL domain D172_019405 PF03707 Bacterial signalling protein N terminal repeat D172_019420 PF00732 GMC oxidoreductase D172_019420 PF05199 GMC oxidoreductase D172_019425 PF00171 Aldehyde dehydrogenase family D172_019430 PF00440 Bacterial regulatory proteins, tetR family D172_019430 PF13977 BetI-type transcriptional repressor, C-terminal D172_019465 PF04958 Arginine N-succinyltransferase beta subunit D172_019470 PF00202 Aminotransferase class-III D172_019475 PF01037 Lrp/AsnC ligand binding domain D172_019490 PF02446 4-alpha-glucanotransferase D172_019495 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D172_019495 PF02806 Alpha amylase, C-terminal all-beta domain D172_019495 PF00128 Alpha amylase, catalytic domain D172_019500 PF00128 Alpha amylase, catalytic domain D172_019500 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) D172_019505 PF00343 Carbohydrate phosphorylase D172_019510 PF00483 Nucleotidyl transferase D172_019515 PF08323 Starch synthase catalytic domain D172_019515 PF00534 Glycosyl transferases group 1 D172_019520 PF08668 HDOD domain D172_019520 PF00563 EAL domain D172_019525 PF04235 Protein of unknown function (DUF418) D172_019530 PF00849 RNA pseudouridylate synthase D172_019530 PF01479 S4 domain D172_019535 PF07516 SecA Wing and Scaffold domain D172_019535 PF01043 SecA preprotein cross-linking domain D172_019535 PF07517 SecA DEAD-like domain D172_019535 PF02810 SEC-C motif D172_019540 PF00873 AcrB/AcrD/AcrF family D172_019565 PF03006 Haemolysin-III related D172_019570 PF00593 TonB dependent receptor D172_019570 PF07715 TonB-dependent Receptor Plug Domain D172_019580 PF14600 Cellulose-binding domain D172_019580 PF00150 Cellulase (glycosyl hydrolase family 5) D172_019585 PF09423 PhoD-like phosphatase D172_019585 PF16655 PhoD-like phosphatase, N-terminal domain D172_019600 PF04545 Sigma-70, region 4 D172_019600 PF04542 Sigma-70 region 2 D172_019615 PF00875 DNA photolyase D172_019615 PF03441 FAD binding domain of DNA photolyase D172_019630 PF01593 Flavin containing amine oxidoreductase D172_019660 PF00216 Bacterial DNA-binding protein D172_019665 PF10369 Small subunit of acetolactate synthase D172_019670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D172_019670 PF00205 Thiamine pyrophosphate enzyme, central domain D172_019670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D172_019675 PF05547 Immune inhibitor A peptidase M6 D172_019675 PF00801 PKD domain D172_019680 PF00180 Isocitrate/isopropylmalate dehydrogenase D172_019680 PF18324 Hypothetical protein TT1725 D172_019700 PF03641 Possible lysine decarboxylase D172_019700 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D172_019700 PF11892 Domain of unknown function (DUF3412) D172_019705 PF00990 Diguanylate cyclase, GGDEF domain D172_019715 PF10459 Peptidase S46 D172_019730 PF10459 Peptidase S46 D172_019735 PF01043 SecA preprotein cross-linking domain D172_019735 PF07517 SecA DEAD-like domain D172_019735 PF07516 SecA Wing and Scaffold domain D172_019735 PF02810 SEC-C motif D172_019740 PF01053 Cys/Met metabolism PLP-dependent enzyme D172_019755 PF01502 Phosphoribosyl-AMP cyclohydrolase D172_019755 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D172_019770 PF00117 Glutamine amidotransferase class-I D172_019775 PF00475 Imidazoleglycerol-phosphate dehydratase D172_019775 PF08645 Polynucleotide kinase 3 phosphatase D172_019780 PF00155 Aminotransferase class I and II D172_019790 PF08029 HisG, C-terminal domain D172_019790 PF01634 ATP phosphoribosyltransferase D172_019800 PF03239 Iron permease FTR1 family D172_019805 PF00999 Sodium/hydrogen exchanger family D172_019810 PF02868 Thermolysin metallopeptidase, alpha-helical domain D172_019810 PF07504 Fungalysin/Thermolysin Propeptide Motif D172_019810 PF03413 Peptidase propeptide and YPEB domain D172_019810 PF01447 Thermolysin metallopeptidase, catalytic domain D172_019810 PF04151 Bacterial pre-peptidase C-terminal domain D172_019815 PF04151 Bacterial pre-peptidase C-terminal domain D172_019815 PF04389 Peptidase family M28 D172_019820 PF13307 Helicase C-terminal domain D172_019820 PF04851 Type III restriction enzyme, res subunit D172_019825 PF00814 Glycoprotease family D172_019835 PF00245 Alkaline phosphatase D172_019845 PF12146 Serine aminopeptidase, S33 D172_019850 PF00501 AMP-binding enzyme D172_019850 PF13193 AMP-binding enzyme C-terminal domain D172_019855 PF00570 HRDC domain D172_019855 PF01612 3'-5' exonuclease D172_019865 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D172_019880 PF13406 Transglycosylase SLT domain D172_019890 PF00107 Zinc-binding dehydrogenase D172_019890 PF08240 Alcohol dehydrogenase GroES-like domain D172_019895 PF00593 TonB dependent receptor D172_019895 PF07715 TonB-dependent Receptor Plug Domain D172_019910 PF03692 Putative zinc- or iron-chelating domain D172_019925 PF07690 Major Facilitator Superfamily D172_019930 PF00072 Response regulator receiver domain D172_019930 PF00990 Diguanylate cyclase, GGDEF domain D172_019945 PF01618 MotA/TolQ/ExbB proton channel family D172_019950 PF01618 MotA/TolQ/ExbB proton channel family D172_019955 PF02472 Biopolymer transport protein ExbD/TolR D172_019960 PF03544 Gram-negative bacterial TonB protein C-terminal D172_019985 PF01118 Semialdehyde dehydrogenase, NAD binding domain D172_019985 PF02774 Semialdehyde dehydrogenase, dimerisation domain D172_020010 PF09962 Uncharacterized conserved protein (DUF2196) D172_020025 PF00817 impB/mucB/samB family D172_020025 PF11799 impB/mucB/samB family C-terminal domain D172_020025 PF13438 Domain of unknown function (DUF4113) D172_020030 PF00717 Peptidase S24-like D172_020045 PF00296 Luciferase-like monooxygenase D172_020050 PF01734 Patatin-like phospholipase D172_020060 PF02423 Ornithine cyclodeaminase/mu-crystallin family D172_020070 PF01235 Sodium:alanine symporter family D172_020105 PF05707 Zonular occludens toxin (Zot) D172_020165 PF00999 Sodium/hydrogen exchanger family D172_020165 PF03471 Transporter associated domain D172_020165 PF02080 TrkA-C domain D172_020170 PF13183 4Fe-4S dicluster domain D172_020170 PF01565 FAD binding domain D172_020170 PF02913 FAD linked oxidases, C-terminal domain D172_020180 PF02896 PEP-utilising enzyme, TIM barrel domain D172_020180 PF00391 PEP-utilising enzyme, mobile domain D172_020180 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D172_020190 PF01474 Class-II DAHP synthetase family D172_020205 PF13614 AAA domain D172_020215 PF00176 SNF2 family N-terminal domain D172_020215 PF04434 SWIM zinc finger D172_020215 PF00271 Helicase conserved C-terminal domain D172_020220 PF02646 RmuC family D172_020235 PF13411 MerR HTH family regulatory protein D172_020240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family D172_020240 PF07992 Pyridine nucleotide-disulphide oxidoreductase D172_020245 PF01965 DJ-1/PfpI family D172_020250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_020250 PF03466 LysR substrate binding domain D172_020255 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase D172_020260 PF13419 Haloacid dehalogenase-like hydrolase D172_020290 PF00535 Glycosyl transferase family 2 D172_020300 PF00535 Glycosyl transferase family 2 D172_020305 PF03466 LysR substrate binding domain D172_020305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_020335 PF01047 MarR family D172_020340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D172_020340 PF00529 HlyD membrane-fusion protein of T1SS D172_020350 PF00472 RF-1 domain D172_020365 PF17210 SdrD B-like domain D172_020365 PF17961 Bacterial Ig domain D172_020365 PF10425 C-terminus of bacterial fibrinogen-binding adhesin D172_020365 PF00746 LPXTG cell wall anchor motif D172_020365 PF04650 YSIRK type signal peptide D172_020380 PF00106 short chain dehydrogenase D172_020395 PF00106 short chain dehydrogenase D172_020400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain D172_020400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain D172_020400 PF02770 Acyl-CoA dehydrogenase, middle domain D172_020405 PF03466 LysR substrate binding domain D172_020405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_020410 PF01758 Sodium Bile acid symporter family D172_020415 PF03167 Uracil DNA glycosylase superfamily D172_020440 PF08212 Lipocalin-like domain D172_020465 PF03466 LysR substrate binding domain D172_020465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_020495 PF00149 Calcineurin-like phosphoesterase D172_020495 PF12320 Type 5 capsule protein repressor C-terminal domain D172_020520 PF13419 Haloacid dehalogenase-like hydrolase D172_020530 PF01274 Malate synthase D172_020535 PF00463 Isocitrate lyase family D172_020545 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) D172_020550 PF00425 chorismate binding enzyme D172_020555 PF00550 Phosphopantetheine attachment site D172_020555 PF00668 Condensation domain D172_020555 PF13193 AMP-binding enzyme C-terminal domain D172_020555 PF00501 AMP-binding enzyme D172_020560 PF03621 MbtH-like protein D172_020565 PF00550 Phosphopantetheine attachment site D172_020565 PF00501 AMP-binding enzyme D172_020565 PF00975 Thioesterase domain D172_020565 PF13193 AMP-binding enzyme C-terminal domain D172_020565 PF00668 Condensation domain D172_020570 PF00501 AMP-binding enzyme D172_020570 PF00668 Condensation domain D172_020570 PF00550 Phosphopantetheine attachment site D172_020575 PF00501 AMP-binding enzyme D172_020575 PF13193 AMP-binding enzyme C-terminal domain D172_020580 PF01546 Peptidase family M20/M25/M40 D172_020580 PF07687 Peptidase dimerisation domain D172_020585 PF01497 Periplasmic binding protein D172_020590 PF01032 FecCD transport family D172_020605 PF07715 TonB-dependent Receptor Plug Domain D172_020605 PF00593 TonB dependent receptor D172_020615 PF03746 LamB/YcsF family D172_020620 PF00933 Glycosyl hydrolase family 3 N terminal domain D172_020625 PF00990 Diguanylate cyclase, GGDEF domain D172_020625 PF17158 Membrane-associated sensor, integral membrane domain D172_020645 PF00501 AMP-binding enzyme D172_020665 PF00486 Transcriptional regulatory protein, C terminal D172_020665 PF00072 Response regulator receiver domain D172_020670 PF08521 Two-component sensor kinase N-terminal D172_020670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D172_020670 PF00512 His Kinase A (phospho-acceptor) domain D172_020690 PF00313 'Cold-shock' DNA-binding domain D172_020700 PF07670 Nucleoside recognition D172_020700 PF01773 Na+ dependent nucleoside transporter N-terminus D172_020700 PF07662 Na+ dependent nucleoside transporter C-terminus D172_020705 PF00485 Phosphoribulokinase / Uridine kinase family D172_020720 PF01527 Transposase D172_020725 PF13276 HTH-like domain D172_020725 PF00665 Integrase core domain D172_020725 PF13333 Integrase core domain D172_020730 PF01527 Transposase D172_020735 PF13276 HTH-like domain D172_020735 PF13683 Integrase core domain D172_020740 PF00175 Oxidoreductase NAD-binding domain D172_020740 PF00970 Oxidoreductase FAD-binding domain D172_020760 PF00141 Peroxidase D172_020770 PF00005 ABC transporter D172_020770 PF12848 ABC transporter D172_020795 PF00145 C-5 cytosine-specific DNA methylase D172_020840 PF13286 Phosphohydrolase-associated domain D172_020840 PF01966 HD domain D172_020860 PF03594 Benzoate membrane transport protein D172_020870 PF00158 Sigma-54 interaction domain D172_020870 PF00072 Response regulator receiver domain D172_020870 PF02954 Bacterial regulatory protein, Fis family D172_020875 PF07715 TonB-dependent Receptor Plug Domain D172_020875 PF00593 TonB dependent receptor D172_020890 PF07992 Pyridine nucleotide-disulphide oxidoreductase D172_020895 PF00570 HRDC domain D172_020895 PF16124 RecQ zinc-binding D172_020895 PF09382 RQC domain D172_020895 PF00271 Helicase conserved C-terminal domain D172_020895 PF00270 DEAD/DEAH box helicase D172_020910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D172_020910 PF00672 HAMP domain D172_020910 PF17200 Single Cache domain 2 D172_020920 PF16884 N-terminal domain of oxidoreductase D172_020920 PF00107 Zinc-binding dehydrogenase D172_020925 PF13302 Acetyltransferase (GNAT) domain D172_020930 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) D172_020945 PF03466 LysR substrate binding domain D172_020945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_020975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D172_020975 PF03466 LysR substrate binding domain D172_020980 PF03601 Conserved hypothetical protein 698 D172_020985 PF03441 FAD binding domain of DNA photolyase D172_020985 PF00875 DNA photolyase D172_021010 PF13360 PQQ-like domain D172_021015 PF09976 Tetratricopeptide repeat-like domain D172_021030 PF13464 Domain of unknown function (DUF4115) D172_021065 PF00593 TonB dependent receptor D172_021065 PF07715 TonB-dependent Receptor Plug Domain D172_021095 PF00037 4Fe-4S binding domain D172_021100 PF00149 Calcineurin-like phosphoesterase