D172_003465 d33bf78bdd09119159c1a721e4dc6141 226 Gene3D G3DSA:3.10.450.50 36 184 1.9E-41 T 14-10-2018 D172_003465 d33bf78bdd09119159c1a721e4dc6141 226 PIRSF PIRSF004649 1 223 1.3E-67 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC D172_003465 d33bf78bdd09119159c1a721e4dc6141 226 Pfam PF05494 MlaC protein 36 211 4.8E-52 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC D172_003465 d33bf78bdd09119159c1a721e4dc6141 226 Gene3D G3DSA:1.10.10.640 73 209 1.9E-41 T 14-10-2018 D172_002190 b347582e7985873bd8b76a5433c95b94 606 SUPERFAMILY SSF52540 394 600 1.03E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_002190 b347582e7985873bd8b76a5433c95b94 606 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 573 586 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D172_002190 b347582e7985873bd8b76a5433c95b94 606 Pfam PF00448 SRP54-type protein, GTPase domain 399 599 1.2E-75 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D172_002190 b347582e7985873bd8b76a5433c95b94 606 Gene3D G3DSA:1.20.120.140 301 598 6.5E-115 T 14-10-2018 D172_002190 b347582e7985873bd8b76a5433c95b94 606 Pfam PF02881 SRP54-type protein, helical bundle domain 316 380 1.9E-13 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D172_002190 b347582e7985873bd8b76a5433c95b94 606 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 327 600 62.569 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 D172_002190 b347582e7985873bd8b76a5433c95b94 606 SMART SM00382 398 589 3.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_002190 b347582e7985873bd8b76a5433c95b94 606 SUPERFAMILY SSF47364 299 377 1.83E-22 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 D172_002190 b347582e7985873bd8b76a5433c95b94 606 SMART SM00962 399 600 2.7E-119 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D172_002190 b347582e7985873bd8b76a5433c95b94 606 Gene3D G3DSA:3.40.50.300 388 588 6.5E-115 T 14-10-2018 D172_002190 b347582e7985873bd8b76a5433c95b94 606 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 327 599 2.2E-110 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 D172_002190 b347582e7985873bd8b76a5433c95b94 606 SMART SM00963 304 384 1.4E-25 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D172_009330 b17cd34fd98a149e3fceea29c4f7b306 531 SUPERFAMILY SSF103473 4 516 3.4E-62 T 14-10-2018 IPR036259 MFS transporter superfamily D172_009330 b17cd34fd98a149e3fceea29c4f7b306 531 ProSitePatterns PS00216 Sugar transport proteins signature 1. 318 334 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D172_009330 b17cd34fd98a149e3fceea29c4f7b306 531 PRINTS PR00171 Sugar transporter signature 19 29 5.1E-14 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_009330 b17cd34fd98a149e3fceea29c4f7b306 531 PRINTS PR00171 Sugar transporter signature 420 441 5.1E-14 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_009330 b17cd34fd98a149e3fceea29c4f7b306 531 PRINTS PR00171 Sugar transporter signature 274 284 5.1E-14 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_009330 b17cd34fd98a149e3fceea29c4f7b306 531 PRINTS PR00171 Sugar transporter signature 443 455 5.1E-14 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_009330 b17cd34fd98a149e3fceea29c4f7b306 531 Pfam PF00083 Sugar (and other) transporter 12 348 2.5E-73 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 D172_009330 b17cd34fd98a149e3fceea29c4f7b306 531 Pfam PF00083 Sugar (and other) transporter 415 517 6.4E-21 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 D172_001010 9c73b900fa41274e57a50fd5a12b5d29 315 SMART SM00448 183 304 4.4E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_001010 9c73b900fa41274e57a50fd5a12b5d29 315 Pfam PF00072 Response regulator receiver domain 185 304 5.1E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_001010 9c73b900fa41274e57a50fd5a12b5d29 315 Pfam PF01584 CheW-like domain 21 159 5.2E-33 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D172_001010 9c73b900fa41274e57a50fd5a12b5d29 315 SUPERFAMILY SSF52172 180 309 8.82E-23 T 14-10-2018 IPR011006 CheY-like superfamily D172_001010 9c73b900fa41274e57a50fd5a12b5d29 315 Gene3D G3DSA:2.40.50.180 39 157 1.9E-26 T 14-10-2018 D172_001010 9c73b900fa41274e57a50fd5a12b5d29 315 SUPERFAMILY SSF50341 16 161 1.44E-31 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 D172_001010 9c73b900fa41274e57a50fd5a12b5d29 315 Gene3D G3DSA:3.40.50.2300 182 312 3.3E-22 T 14-10-2018 D172_001010 9c73b900fa41274e57a50fd5a12b5d29 315 Gene3D G3DSA:2.30.30.40 25 151 1.9E-26 T 14-10-2018 D172_001010 9c73b900fa41274e57a50fd5a12b5d29 315 PIRSF PIRSF002867 1 311 5.4E-102 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV D172_001010 9c73b900fa41274e57a50fd5a12b5d29 315 SMART SM00260 17 157 1.6E-15 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D172_018230 e6b0413c69a873d0399aadfdcda015ee 141 Pfam PF01814 Hemerythrin HHE cation binding domain 3 120 2.7E-11 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 D172_018230 e6b0413c69a873d0399aadfdcda015ee 141 Gene3D G3DSA:1.20.120.520 1 139 1.0E-6 T 14-10-2018 D172_008995 aa37573668e7cb13af52379baa783a2a 299 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 8 297 2.3E-124 T 14-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 D172_008995 aa37573668e7cb13af52379baa783a2a 299 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 167 3.7E-51 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 D172_008995 aa37573668e7cb13af52379baa783a2a 299 SUPERFAMILY SSF48179 168 298 3.63E-43 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_008995 aa37573668e7cb13af52379baa783a2a 299 PIRSF PIRSF000103 1 299 2.4E-78 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 D172_008995 aa37573668e7cb13af52379baa783a2a 299 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 296 8.3E-36 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 D172_008995 aa37573668e7cb13af52379baa783a2a 299 Gene3D G3DSA:3.40.50.720 2 169 2.3E-55 T 14-10-2018 D172_008995 aa37573668e7cb13af52379baa783a2a 299 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 8 21 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 D172_008995 aa37573668e7cb13af52379baa783a2a 299 SUPERFAMILY SSF51735 4 168 4.97E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_008995 aa37573668e7cb13af52379baa783a2a 299 Gene3D G3DSA:1.10.1040.10 170 299 8.1E-48 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 D172_008255 681a896e8f0058d93ab56cf785777736 705 Gene3D G3DSA:3.40.50.150 487 705 1.1E-70 T 14-10-2018 D172_008255 681a896e8f0058d93ab56cf785777736 705 PIRSF PIRSF037618 1 705 1.5E-279 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 D172_008255 681a896e8f0058d93ab56cf785777736 705 Gene3D G3DSA:3.30.2130.30 5 253 7.5E-112 T 14-10-2018 D172_008255 681a896e8f0058d93ab56cf785777736 705 SUPERFAMILY SSF53335 398 704 4.18E-66 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_008255 681a896e8f0058d93ab56cf785777736 705 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 488 661 2.9E-29 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 D172_008255 681a896e8f0058d93ab56cf785777736 705 SUPERFAMILY SSF53335 148 373 9.75E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_008255 681a896e8f0058d93ab56cf785777736 705 Pfam PF02926 THUMP domain 32 152 4.4E-9 T 14-10-2018 IPR004114 THUMP domain GO:0003723 D172_008255 681a896e8f0058d93ab56cf785777736 705 Pfam PF01170 Putative RNA methylase family UPF0020 162 368 9.1E-46 T 14-10-2018 IPR000241 Putative RNA methylase domain D172_008255 681a896e8f0058d93ab56cf785777736 705 Gene3D G3DSA:3.40.50.150 169 367 7.5E-112 T 14-10-2018 D172_008255 681a896e8f0058d93ab56cf785777736 705 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 3 705 29.149 T 14-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 D172_008255 681a896e8f0058d93ab56cf785777736 705 SMART SM00981 56 154 1.7E-12 T 14-10-2018 IPR004114 THUMP domain GO:0003723 D172_008255 681a896e8f0058d93ab56cf785777736 705 Gene3D G3DSA:3.30.750.80 395 486 7.4E-32 T 14-10-2018 D172_015255 89776e8bbbbdcaf1f89a1878232e4d40 209 Gene3D G3DSA:3.40.50.20 1 91 7.1E-22 T 14-10-2018 D172_015255 89776e8bbbbdcaf1f89a1878232e4d40 209 SUPERFAMILY SSF51161 3 207 1.01E-40 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily D172_015255 89776e8bbbbdcaf1f89a1878232e4d40 209 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 158 191 5.2E-6 T 14-10-2018 IPR001451 Hexapeptide repeat D172_015255 89776e8bbbbdcaf1f89a1878232e4d40 209 Gene3D G3DSA:2.160.10.10 93 207 4.6E-28 T 14-10-2018 D172_015255 89776e8bbbbdcaf1f89a1878232e4d40 209 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 4 206 5.1E-65 T 14-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 Pfam PF00750 tRNA synthetases class I (R) 105 449 5.0E-124 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 SUPERFAMILY SSF52374 111 456 9.38E-84 T 14-10-2018 D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 SMART SM00836 463 580 7.7E-35 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 SUPERFAMILY SSF55190 2 96 8.89E-24 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 123 134 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 87 4.2E-23 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 SMART SM01016 1 87 4.7E-31 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 Gene3D G3DSA:1.10.730.10 457 580 7.1E-32 T 14-10-2018 D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 Hamap MF_00123 Arginine--tRNA ligase [argS]. 6 580 25.856 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 SUPERFAMILY SSF47323 459 580 1.63E-32 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 Gene3D G3DSA:3.40.50.620 108 456 6.6E-103 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 Pfam PF05746 DALR anticodon binding domain 463 580 2.6E-30 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 154 167 1.8E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 1.8E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 115 130 1.8E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 130 146 1.8E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 4 580 9.6E-170 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 D172_004465 0ef47eae78f14f4ddbc8e2d494c0fffd 580 Gene3D G3DSA:3.30.1360.70 1 106 4.7E-34 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 D172_004395 b12fe543309551bcd6b375de6bb3b76a 415 SMART SM00490 260 341 1.9E-31 T 14-10-2018 IPR001650 Helicase, C-terminal D172_004395 b12fe543309551bcd6b375de6bb3b76a 415 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D172_004395 b12fe543309551bcd6b375de6bb3b76a 415 Gene3D G3DSA:3.40.50.300 216 412 2.2E-46 T 14-10-2018 D172_004395 b12fe543309551bcd6b375de6bb3b76a 415 Pfam PF00270 DEAD/DEAH box helicase 28 195 2.1E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D172_004395 b12fe543309551bcd6b375de6bb3b76a 415 Gene3D G3DSA:3.40.50.300 1 212 1.1E-74 T 14-10-2018 D172_004395 b12fe543309551bcd6b375de6bb3b76a 415 SUPERFAMILY SSF52540 79 358 1.57E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_004395 b12fe543309551bcd6b375de6bb3b76a 415 SMART SM00487 23 224 6.8E-59 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_004395 b12fe543309551bcd6b375de6bb3b76a 415 Pfam PF00271 Helicase conserved C-terminal domain 242 341 6.6E-26 T 14-10-2018 IPR001650 Helicase, C-terminal D172_020785 fbcfdc2645de5820299000a8d4e84f46 414 SUPERFAMILY SSF101327 24 138 2.22E-6 T 14-10-2018 IPR036255 YgfB-like superfamily D172_020785 fbcfdc2645de5820299000a8d4e84f46 414 Pfam PF03695 Uncharacterised protein family (UPF0149) 15 152 9.8E-10 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 D172_019800 fc51a57dcb8dffcc60c2a5607c013be1 618 Gene3D G3DSA:1.10.760.10 109 212 6.1E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_019800 fc51a57dcb8dffcc60c2a5607c013be1 618 SUPERFAMILY SSF46626 121 218 3.15E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_019800 fc51a57dcb8dffcc60c2a5607c013be1 618 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 122 202 2.1E-8 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_019800 fc51a57dcb8dffcc60c2a5607c013be1 618 Pfam PF03239 Iron permease FTR1 family 329 481 1.6E-20 T 14-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 SMART SM00387 28 174 4.3E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_002790 393ad2444f20f8917397dfa2f47ce371 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 4 625 0.0 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 Pfam PF00204 DNA gyrase B 219 385 2.6E-41 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 Gene3D G3DSA:3.30.565.10 3 216 5.4E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_002790 393ad2444f20f8917397dfa2f47ce371 629 Pfam PF01751 Toprim domain 414 523 3.6E-13 T 14-10-2018 IPR006171 TOPRIM domain D172_002790 393ad2444f20f8917397dfa2f47ce371 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 559 621 6.2E-25 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 3 629 46.81 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 SUPERFAMILY SSF56719 389 623 7.06E-78 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 Gene3D G3DSA:3.30.230.10 217 390 1.4E-56 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D172_002790 393ad2444f20f8917397dfa2f47ce371 629 Gene3D G3DSA:3.40.50.670 391 624 3.5E-89 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 SUPERFAMILY SSF55874 5 216 2.36E-67 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_002790 393ad2444f20f8917397dfa2f47ce371 629 SMART SM00433 35 625 4.4E-214 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR01098 Topoisomerase IV subunit B signature 175 192 1.5E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR01098 Topoisomerase IV subunit B signature 136 150 1.5E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 1.5E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 1.5E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 1.5E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 1.5E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 1.5E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 1.5E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 1.5E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 1.5E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR01098 Topoisomerase IV subunit B signature 150 165 1.5E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 1.5E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR01098 Topoisomerase IV subunit B signature 27 40 1.5E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR01098 Topoisomerase IV subunit B signature 193 214 1.5E-117 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR00418 DNA topoisomerase II family signature 498 515 9.3E-59 T 14-10-2018 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR00418 DNA topoisomerase II family signature 480 496 9.3E-59 T 14-10-2018 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR00418 DNA topoisomerase II family signature 110 124 9.3E-59 T 14-10-2018 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR00418 DNA topoisomerase II family signature 518 530 9.3E-59 T 14-10-2018 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR00418 DNA topoisomerase II family signature 32 47 9.3E-59 T 14-10-2018 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR00418 DNA topoisomerase II family signature 563 579 9.3E-59 T 14-10-2018 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR00418 DNA topoisomerase II family signature 415 429 9.3E-59 T 14-10-2018 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR00418 DNA topoisomerase II family signature 67 80 9.3E-59 T 14-10-2018 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 PRINTS PR00418 DNA topoisomerase II family signature 267 280 9.3E-59 T 14-10-2018 D172_002790 393ad2444f20f8917397dfa2f47ce371 629 SUPERFAMILY SSF54211 219 383 1.63E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_002790 393ad2444f20f8917397dfa2f47ce371 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 172 2.0E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_003200 943a6c44cb17e5680e383a1b9430435f 145 Gene3D G3DSA:3.30.1490.190 87 145 2.1E-13 T 14-10-2018 D172_003200 943a6c44cb17e5680e383a1b9430435f 145 Gene3D G3DSA:1.10.10.10 1 86 1.7E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_003200 943a6c44cb17e5680e383a1b9430435f 145 Pfam PF01475 Ferric uptake regulator family 17 134 3.0E-13 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 D172_003200 943a6c44cb17e5680e383a1b9430435f 145 SUPERFAMILY SSF46785 10 140 1.79E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_000555 b101e5512489575675c98f0e7a749e38 377 Pfam PF03929 PepSY-associated TM region 6 357 1.7E-52 T 14-10-2018 IPR005625 PepSY-associated TM protein D172_002150 d5dfc68f3a2fc8789a7a7d31378bf9af 96 Gene3D G3DSA:1.10.10.60 1 96 1.6E-30 T 14-10-2018 D172_002150 d5dfc68f3a2fc8789a7a7d31378bf9af 96 PIRSF PIRSF002097 1 96 1.3E-39 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 D172_002150 d5dfc68f3a2fc8789a7a7d31378bf9af 96 Pfam PF02954 Bacterial regulatory protein, Fis family 53 93 4.8E-15 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_002150 d5dfc68f3a2fc8789a7a7d31378bf9af 96 SUPERFAMILY SSF46689 16 96 2.46E-23 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_002150 d5dfc68f3a2fc8789a7a7d31378bf9af 96 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 76 96 1.1E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_002150 d5dfc68f3a2fc8789a7a7d31378bf9af 96 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 59 76 1.1E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_013115 2a7239050fd880f8659e1eaea0da9fa7 423 SUPERFAMILY SSF47384 180 261 1.57E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_013115 2a7239050fd880f8659e1eaea0da9fa7 423 Gene3D G3DSA:3.30.565.10 261 414 6.3E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_013115 2a7239050fd880f8659e1eaea0da9fa7 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 197 260 5.0E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_013115 2a7239050fd880f8659e1eaea0da9fa7 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 304 412 1.8E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_013115 2a7239050fd880f8659e1eaea0da9fa7 423 Gene3D G3DSA:1.10.287.130 151 260 8.7E-17 T 14-10-2018 D172_013115 2a7239050fd880f8659e1eaea0da9fa7 423 SMART SM00387 303 413 1.8E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_013115 2a7239050fd880f8659e1eaea0da9fa7 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 366 3.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013115 2a7239050fd880f8659e1eaea0da9fa7 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 3.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013115 2a7239050fd880f8659e1eaea0da9fa7 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 3.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013115 2a7239050fd880f8659e1eaea0da9fa7 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 352 3.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013115 2a7239050fd880f8659e1eaea0da9fa7 423 SMART SM00388 196 261 2.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_013115 2a7239050fd880f8659e1eaea0da9fa7 423 SUPERFAMILY SSF55874 251 411 1.14E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 SUPERFAMILY SSF50677 204 409 2.62E-52 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 Gene3D G3DSA:1.10.730.20 646 934 4.5E-90 T 14-10-2018 D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 646 1.1E-212 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 933 21.347 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 SUPERFAMILY SSF47323 658 933 3.74E-77 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 2.3E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 533 546 2.3E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 567 576 2.3E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 2.3E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 407 422 2.3E-33 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 847 1.2E-290 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 Gene3D G3DSA:3.90.740.10 195 414 3.3E-237 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 Gene3D G3DSA:3.40.50.620 25 635 3.3E-237 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 Pfam PF08264 Anticodon-binding domain of tRNA 691 845 4.7E-26 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 SUPERFAMILY SSF52374 3 653 2.68E-138 T 14-10-2018 D172_005460 883379ed5091fa69ff8b4c5d0a63d2a6 942 Pfam PF06827 Zinc finger found in FPG and IleRS 904 930 1.6E-7 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 D172_012420 858daf942786059d29f55012f4cb145e 499 SUPERFAMILY SSF47794 434 496 2.04E-15 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 D172_012420 858daf942786059d29f55012f4cb145e 499 SUPERFAMILY SSF54814 284 348 1.5E-15 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 D172_012420 858daf942786059d29f55012f4cb145e 499 SUPERFAMILY SSF54814 206 283 6.34E-28 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 D172_012420 858daf942786059d29f55012f4cb145e 499 Gene3D G3DSA:3.30.300.20 283 351 9.8E-25 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta D172_012420 858daf942786059d29f55012f4cb145e 499 Pfam PF13184 NusA-like KH domain 235 301 4.4E-28 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 D172_012420 858daf942786059d29f55012f4cb145e 499 Gene3D G3DSA:2.40.50.140 140 203 8.3E-18 T 14-10-2018 D172_012420 858daf942786059d29f55012f4cb145e 499 SMART SM00316 138 205 4.8E-9 T 14-10-2018 IPR022967 RNA-binding domain, S1 D172_012420 858daf942786059d29f55012f4cb145e 499 SUPERFAMILY SSF69705 1 130 1.02E-36 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 D172_012420 858daf942786059d29f55012f4cb145e 499 Pfam PF08529 NusA N-terminal domain 4 128 1.3E-32 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 D172_012420 858daf942786059d29f55012f4cb145e 499 SUPERFAMILY SSF50249 136 204 4.89E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_012420 858daf942786059d29f55012f4cb145e 499 Gene3D G3DSA:3.30.300.20 204 282 3.9E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta D172_012420 858daf942786059d29f55012f4cb145e 499 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 446 494 6.3E-15 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication D172_012420 858daf942786059d29f55012f4cb145e 499 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 370 419 3.0E-18 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication D172_012420 858daf942786059d29f55012f4cb145e 499 Gene3D G3DSA:1.10.150.20 436 495 6.5E-23 T 14-10-2018 D172_012420 858daf942786059d29f55012f4cb145e 499 Pfam PF14520 Helix-hairpin-helix domain 437 491 5.1E-7 T 14-10-2018 D172_012420 858daf942786059d29f55012f4cb145e 499 SUPERFAMILY SSF47794 360 421 1.22E-14 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 D172_012420 858daf942786059d29f55012f4cb145e 499 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 3.8E-123 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 D172_012420 858daf942786059d29f55012f4cb145e 499 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 415 28.4 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 D172_012420 858daf942786059d29f55012f4cb145e 499 Gene3D G3DSA:3.30.1480.10 1 134 1.5E-39 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 D172_012420 858daf942786059d29f55012f4cb145e 499 Gene3D G3DSA:1.10.150.20 358 426 8.8E-25 T 14-10-2018 D172_010150 7638ad40ebb7806e11a500cb514ffc04 345 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 13 342 38.275 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 D172_010150 7638ad40ebb7806e11a500cb514ffc04 345 SUPERFAMILY SSF47648 10 76 1.96E-15 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 D172_010150 7638ad40ebb7806e11a500cb514ffc04 345 SUPERFAMILY SSF52418 82 341 1.96E-93 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 D172_010150 7638ad40ebb7806e11a500cb514ffc04 345 Gene3D G3DSA:3.40.1030.10 79 345 1.7E-104 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 D172_010150 7638ad40ebb7806e11a500cb514ffc04 345 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 15 341 2.7E-128 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 D172_010150 7638ad40ebb7806e11a500cb514ffc04 345 Pfam PF00591 Glycosyl transferase family, a/b domain 82 332 3.6E-100 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 D172_010150 7638ad40ebb7806e11a500cb514ffc04 345 Pfam PF02885 Glycosyl transferase family, helical bundle domain 13 74 3.7E-14 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 D172_010150 7638ad40ebb7806e11a500cb514ffc04 345 Gene3D G3DSA:1.20.970.10 1 77 1.0E-19 T 14-10-2018 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 SUPERFAMILY SSF55785 521 645 5.23E-10 T 14-10-2018 IPR035965 PAS domain superfamily D172_002610 80c8636f28fd24ede0f338d63282de82 1264 Pfam PF01627 Hpt domain 1175 1240 1.2E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 Pfam PF00072 Response regulator receiver domain 1033 1144 5.9E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 SMART SM00388 660 725 2.8E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 SUPERFAMILY SSF55785 404 522 5.58E-13 T 14-10-2018 IPR035965 PAS domain superfamily D172_002610 80c8636f28fd24ede0f338d63282de82 1264 Gene3D G3DSA:3.30.450.20 404 525 1.3E-17 T 14-10-2018 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 SMART SM00448 1031 1144 2.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 Pfam PF13426 PAS domain 548 645 4.3E-4 T 14-10-2018 IPR000014 PAS domain D172_002610 80c8636f28fd24ede0f338d63282de82 1264 Gene3D G3DSA:3.30.450.20 526 642 3.0E-8 T 14-10-2018 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 773 887 5.0E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_002610 80c8636f28fd24ede0f338d63282de82 1264 SMART SM00091 417 485 5.1E-4 T 14-10-2018 IPR000014 PAS domain D172_002610 80c8636f28fd24ede0f338d63282de82 1264 SMART SM00091 536 601 2.4 T 14-10-2018 IPR000014 PAS domain D172_002610 80c8636f28fd24ede0f338d63282de82 1264 Pfam PF00512 His Kinase A (phospho-acceptor) domain 660 724 1.1E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 Gene3D G3DSA:1.20.120.160 1156 1254 6.9E-13 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 SUPERFAMILY SSF52172 1031 1147 2.7E-30 T 14-10-2018 IPR011006 CheY-like superfamily D172_002610 80c8636f28fd24ede0f338d63282de82 1264 SUPERFAMILY SSF55874 714 885 2.36E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_002610 80c8636f28fd24ede0f338d63282de82 1264 Gene3D G3DSA:3.30.565.10 726 893 1.8E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_002610 80c8636f28fd24ede0f338d63282de82 1264 Pfam PF08448 PAS fold 423 525 2.1E-11 T 14-10-2018 IPR013656 PAS fold-4 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 SUPERFAMILY SSF47384 646 724 1.04E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 SUPERFAMILY SSF47226 1155 1254 6.54E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 SMART SM00387 772 889 5.9E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_002610 80c8636f28fd24ede0f338d63282de82 1264 Gene3D G3DSA:1.10.287.130 643 723 1.8E-20 T 14-10-2018 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 PRINTS PR00344 Bacterial sensor protein C-terminal signature 832 842 2.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 PRINTS PR00344 Bacterial sensor protein C-terminal signature 849 867 2.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 PRINTS PR00344 Bacterial sensor protein C-terminal signature 814 828 2.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 PRINTS PR00344 Bacterial sensor protein C-terminal signature 873 886 2.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_002610 80c8636f28fd24ede0f338d63282de82 1264 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 532 651 5.1E-7 T 14-10-2018 IPR000014 PAS domain D172_002610 80c8636f28fd24ede0f338d63282de82 1264 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 416 527 1.4E-9 T 14-10-2018 IPR000014 PAS domain D172_002610 80c8636f28fd24ede0f338d63282de82 1264 Gene3D G3DSA:3.40.50.2300 1032 1155 1.6E-31 T 14-10-2018 D172_003965 84581e952b4071e7b1eb2a8ac5a00326 205 Pfam PF04973 Nicotinamide mononucleotide transporter 16 191 5.5E-44 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 D172_003965 84581e952b4071e7b1eb2a8ac5a00326 205 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 30 193 7.4E-16 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 D172_020795 ccac09fce70e0791ad7293ee07320fa0 392 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 387 1.0E-61 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 D172_020795 ccac09fce70e0791ad7293ee07320fa0 392 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 7 386 2.5E-46 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 D172_020795 ccac09fce70e0791ad7293ee07320fa0 392 Gene3D G3DSA:3.40.50.150 1 252 4.8E-58 T 14-10-2018 D172_020795 ccac09fce70e0791ad7293ee07320fa0 392 SUPERFAMILY SSF53335 4 389 1.83E-80 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_020795 ccac09fce70e0791ad7293ee07320fa0 392 Gene3D G3DSA:3.90.120.10 259 379 1.4E-26 T 14-10-2018 D172_020795 ccac09fce70e0791ad7293ee07320fa0 392 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 80 92 - T 14-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 D172_020795 ccac09fce70e0791ad7293ee07320fa0 392 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 368 386 - T 14-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 D172_020795 ccac09fce70e0791ad7293ee07320fa0 392 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 5 21 1.6E-14 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 D172_020795 ccac09fce70e0791ad7293ee07320fa0 392 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 169 182 1.6E-14 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 D172_020795 ccac09fce70e0791ad7293ee07320fa0 392 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 120 134 1.6E-14 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 D172_014450 779898e13eb83a4a5806540d0404e5c0 435 SUPERFAMILY SSF55785 88 196 1.15E-6 T 14-10-2018 IPR035965 PAS domain superfamily D172_014450 779898e13eb83a4a5806540d0404e5c0 435 SMART SM00388 205 272 5.4E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_014450 779898e13eb83a4a5806540d0404e5c0 435 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 425 2.7E-140 T 14-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 D172_014450 779898e13eb83a4a5806540d0404e5c0 435 SUPERFAMILY SSF55874 262 425 3.67E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_014450 779898e13eb83a4a5806540d0404e5c0 435 Gene3D G3DSA:1.10.287.130 202 272 7.0E-23 T 14-10-2018 D172_014450 779898e13eb83a4a5806540d0404e5c0 435 SUPERFAMILY SSF47384 192 270 6.28E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_014450 779898e13eb83a4a5806540d0404e5c0 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 425 3.7E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_014450 779898e13eb83a4a5806540d0404e5c0 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 3.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_014450 779898e13eb83a4a5806540d0404e5c0 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 3.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_014450 779898e13eb83a4a5806540d0404e5c0 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 3.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_014450 779898e13eb83a4a5806540d0404e5c0 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 3.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_014450 779898e13eb83a4a5806540d0404e5c0 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 5.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_014450 779898e13eb83a4a5806540d0404e5c0 435 Pfam PF11808 Domain of unknown function (DUF3329) 8 90 2.5E-28 T 14-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 D172_014450 779898e13eb83a4a5806540d0404e5c0 435 Gene3D G3DSA:3.30.565.10 280 430 5.8E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_014450 779898e13eb83a4a5806540d0404e5c0 435 SMART SM00091 98 166 0.0047 T 14-10-2018 IPR000014 PAS domain D172_014450 779898e13eb83a4a5806540d0404e5c0 435 Gene3D G3DSA:3.30.450.20 86 201 2.5E-7 T 14-10-2018 D172_014450 779898e13eb83a4a5806540d0404e5c0 435 SMART SM00387 317 429 1.4E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_017465 bd50af2c4d361e15cd4c2f0c2474a639 142 Pfam PF02566 OsmC-like protein 44 139 6.9E-18 T 14-10-2018 IPR003718 OsmC/Ohr family D172_017465 bd50af2c4d361e15cd4c2f0c2474a639 142 Gene3D G3DSA:3.30.300.20 49 142 3.0E-33 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta D172_017465 bd50af2c4d361e15cd4c2f0c2474a639 142 SUPERFAMILY SSF82784 8 141 2.75E-43 T 14-10-2018 IPR036102 OsmC/Ohr superfamily D172_017465 bd50af2c4d361e15cd4c2f0c2474a639 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 9 141 3.1E-56 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 D172_017465 bd50af2c4d361e15cd4c2f0c2474a639 142 Gene3D G3DSA:2.20.25.10 1 48 3.8E-22 T 14-10-2018 D172_008475 78be82977de92b028e55f0e39100b29d 574 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 573 41.744 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 D172_008475 78be82977de92b028e55f0e39100b29d 574 Gene3D G3DSA:3.90.960.10 240 391 1.2E-239 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 D172_008475 78be82977de92b028e55f0e39100b29d 574 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 1.3E-245 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 D172_008475 78be82977de92b028e55f0e39100b29d 574 SUPERFAMILY SSF52954 465 573 2.27E-32 T 14-10-2018 D172_008475 78be82977de92b028e55f0e39100b29d 574 Gene3D G3DSA:3.40.50.800 4 556 1.2E-239 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily D172_008475 78be82977de92b028e55f0e39100b29d 574 SUPERFAMILY SSF55826 218 391 1.96E-29 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 D172_008475 78be82977de92b028e55f0e39100b29d 574 SUPERFAMILY SSF55681 10 480 7.04E-103 T 14-10-2018 D172_008475 78be82977de92b028e55f0e39100b29d 574 Gene3D G3DSA:3.30.930.10 11 467 1.2E-239 T 14-10-2018 D172_008475 78be82977de92b028e55f0e39100b29d 574 Pfam PF03129 Anticodon binding domain 478 570 3.3E-22 T 14-10-2018 IPR004154 Anticodon-binding D172_008475 78be82977de92b028e55f0e39100b29d 574 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 7.7E-23 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 D172_008475 78be82977de92b028e55f0e39100b29d 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.0E-18 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 D172_008475 78be82977de92b028e55f0e39100b29d 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.0E-18 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 D172_008475 78be82977de92b028e55f0e39100b29d 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.0E-18 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 D172_008475 78be82977de92b028e55f0e39100b29d 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.0E-18 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 D172_008475 78be82977de92b028e55f0e39100b29d 574 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 461 7.4E-47 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_008475 78be82977de92b028e55f0e39100b29d 574 PIRSF PIRSF001535 1 574 2.2E-264 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 D172_014170 7af9d232cc5af2263b2b6156fdb4e672 361 Gene3D G3DSA:3.40.50.2000 13 353 2.9E-49 T 14-10-2018 D172_014170 7af9d232cc5af2263b2b6156fdb4e672 361 Pfam PF00534 Glycosyl transferases group 1 191 337 1.4E-27 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 D172_014170 7af9d232cc5af2263b2b6156fdb4e672 361 Gene3D G3DSA:3.40.50.2000 179 347 2.9E-49 T 14-10-2018 D172_014170 7af9d232cc5af2263b2b6156fdb4e672 361 Pfam PF13439 Glycosyltransferase Family 4 13 182 1.1E-11 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D172_014170 7af9d232cc5af2263b2b6156fdb4e672 361 SUPERFAMILY SSF53756 2 339 1.12E-49 T 14-10-2018 D172_004680 37c1c4c41938908c06bdd08f6f2719ec 216 SUPERFAMILY SSF52172 4 181 4.47E-21 T 14-10-2018 IPR011006 CheY-like superfamily D172_004680 37c1c4c41938908c06bdd08f6f2719ec 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 3.2E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_004680 37c1c4c41938908c06bdd08f6f2719ec 216 Pfam PF00072 Response regulator receiver domain 5 117 3.5E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004680 37c1c4c41938908c06bdd08f6f2719ec 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_004680 37c1c4c41938908c06bdd08f6f2719ec 216 SMART SM00448 2 116 3.8E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004680 37c1c4c41938908c06bdd08f6f2719ec 216 Gene3D G3DSA:3.40.50.2300 2 130 7.6E-24 T 14-10-2018 D172_004680 37c1c4c41938908c06bdd08f6f2719ec 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 5.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_004680 37c1c4c41938908c06bdd08f6f2719ec 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 5.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_004680 37c1c4c41938908c06bdd08f6f2719ec 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 5.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_004680 37c1c4c41938908c06bdd08f6f2719ec 216 SMART SM00421 148 205 4.8E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_004680 37c1c4c41938908c06bdd08f6f2719ec 216 Gene3D G3DSA:1.10.10.10 148 216 3.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_017435 1991a8660ec94eba4f16668b1bdc091e 285 Gene3D G3DSA:2.30.30.60 122 171 6.3E-18 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily D172_017435 1991a8660ec94eba4f16668b1bdc091e 285 SUPERFAMILY SSF82861 20 105 3.53E-17 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 D172_017435 1991a8660ec94eba4f16668b1bdc091e 285 Gene3D G3DSA:3.30.70.100 172 265 1.8E-22 T 14-10-2018 D172_017435 1991a8660ec94eba4f16668b1bdc091e 285 SUPERFAMILY SSF82689 173 271 3.27E-28 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 D172_017435 1991a8660ec94eba4f16668b1bdc091e 285 SUPERFAMILY SSF50182 106 172 1.21E-16 T 14-10-2018 IPR010920 LSM domain superfamily D172_017435 1991a8660ec94eba4f16668b1bdc091e 285 Pfam PF00924 Mechanosensitive ion channel 65 261 2.6E-51 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 D172_019325 a7f0c21deb2cfda4bd353141c2c8f99b 249 Gene3D G3DSA:3.90.550.10 2 202 6.1E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_019325 a7f0c21deb2cfda4bd353141c2c8f99b 249 SUPERFAMILY SSF53448 1 231 2.3E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_019325 a7f0c21deb2cfda4bd353141c2c8f99b 249 Pfam PF00535 Glycosyl transferase family 2 5 132 1.3E-16 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D172_017965 1a4a0b51a28538ef453bf847a229633b 508 PRINTS PR00067 Catalase signature 309 336 7.8E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_017965 1a4a0b51a28538ef453bf847a229633b 508 PRINTS PR00067 Catalase signature 146 164 7.8E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_017965 1a4a0b51a28538ef453bf847a229633b 508 PRINTS PR00067 Catalase signature 341 367 7.8E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_017965 1a4a0b51a28538ef453bf847a229633b 508 PRINTS PR00067 Catalase signature 43 66 7.8E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_017965 1a4a0b51a28538ef453bf847a229633b 508 PRINTS PR00067 Catalase signature 106 124 7.8E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_017965 1a4a0b51a28538ef453bf847a229633b 508 PRINTS PR00067 Catalase signature 127 144 7.8E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_017965 1a4a0b51a28538ef453bf847a229633b 508 Pfam PF00199 Catalase 30 406 1.6E-167 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_017965 1a4a0b51a28538ef453bf847a229633b 508 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 354 362 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_017965 1a4a0b51a28538ef453bf847a229633b 508 ProSitePatterns PS00438 Catalase proximal active site signature. 66 82 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_017965 1a4a0b51a28538ef453bf847a229633b 508 SMART SM01060 30 411 5.5E-237 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_017965 1a4a0b51a28538ef453bf847a229633b 508 SUPERFAMILY SSF56634 22 498 6.15E-187 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_017965 1a4a0b51a28538ef453bf847a229633b 508 PIRSF PIRSF038928 21 500 3.5E-182 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_017965 1a4a0b51a28538ef453bf847a229633b 508 Gene3D G3DSA:2.40.180.10 26 508 3.2E-202 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 D172_017965 1a4a0b51a28538ef453bf847a229633b 508 Pfam PF06628 Catalase-related immune-responsive 432 494 2.1E-18 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_005620 ebe624442d9e65fee57249441bf4b97c 101 Pfam PF13466 STAS domain 16 95 2.5E-11 T 14-10-2018 IPR002645 STAS domain D172_005620 ebe624442d9e65fee57249441bf4b97c 101 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 100 7.8E-16 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 D172_005620 ebe624442d9e65fee57249441bf4b97c 101 SUPERFAMILY SSF52091 6 100 1.22E-20 T 14-10-2018 IPR036513 STAS domain superfamily D172_005620 ebe624442d9e65fee57249441bf4b97c 101 Gene3D G3DSA:3.30.750.24 2 101 1.0E-19 T 14-10-2018 IPR036513 STAS domain superfamily D172_020340 58b2d9b7cacf02adee370d1b8119cff4 354 Gene3D G3DSA:1.10.287.470 77 199 5.7E-34 T 14-10-2018 D172_020340 58b2d9b7cacf02adee370d1b8119cff4 354 SUPERFAMILY SSF111369 180 249 3.4E-5 T 14-10-2018 D172_020340 58b2d9b7cacf02adee370d1b8119cff4 354 Pfam PF13533 Biotin-lipoyl like 43 88 4.6E-15 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain D172_020340 58b2d9b7cacf02adee370d1b8119cff4 354 SUPERFAMILY SSF111369 43 103 5.89E-10 T 14-10-2018 D172_020340 58b2d9b7cacf02adee370d1b8119cff4 354 Gene3D G3DSA:2.40.50.100 45 233 5.7E-34 T 14-10-2018 D172_020340 58b2d9b7cacf02adee370d1b8119cff4 354 Gene3D G3DSA:2.40.30.170 234 278 5.7E-34 T 14-10-2018 D172_020340 58b2d9b7cacf02adee370d1b8119cff4 354 SUPERFAMILY SSF111369 107 166 2.09E-5 T 14-10-2018 D172_014445 e2156f9e24687e57bcaaf859c9820aba 322 Pfam PF12849 PBP superfamily domain 38 292 6.4E-31 T 14-10-2018 IPR024370 PBP domain D172_014445 e2156f9e24687e57bcaaf859c9820aba 322 Gene3D G3DSA:3.40.190.10 38 309 1.2E-110 T 14-10-2018 D172_014445 e2156f9e24687e57bcaaf859c9820aba 322 Gene3D G3DSA:3.40.190.10 123 265 1.2E-110 T 14-10-2018 D172_014445 e2156f9e24687e57bcaaf859c9820aba 322 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 7 307 8.2E-87 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 D172_014445 e2156f9e24687e57bcaaf859c9820aba 322 SUPERFAMILY SSF53850 40 320 1.44E-72 T 14-10-2018 D172_014550 ba6e7d100d80bb631fc43ffc6fe89757 497 Gene3D G3DSA:3.10.520.20 15 336 2.9E-61 T 14-10-2018 D172_014550 ba6e7d100d80bb631fc43ffc6fe89757 497 Pfam PF10029 Predicted periplasmic protein (DUF2271) 345 467 1.0E-34 T 14-10-2018 IPR014469 Protein of unknown function DUF2271 D172_014550 ba6e7d100d80bb631fc43ffc6fe89757 497 Pfam PF02424 ApbE family 32 312 3.3E-49 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 D172_014550 ba6e7d100d80bb631fc43ffc6fe89757 497 SUPERFAMILY SSF143631 27 327 6.02E-59 T 14-10-2018 IPR003374 ApbE-like superfamily D172_005525 fe4bf27411ffad0918bda5c934d6d9e2 112 PRINTS PR00340 P-II protein signature 83 103 5.6E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D172_005525 fe4bf27411ffad0918bda5c934d6d9e2 112 PRINTS PR00340 P-II protein signature 52 75 5.6E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D172_005525 fe4bf27411ffad0918bda5c934d6d9e2 112 PRINTS PR00340 P-II protein signature 2 17 5.6E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D172_005525 fe4bf27411ffad0918bda5c934d6d9e2 112 PRINTS PR00340 P-II protein signature 23 41 5.6E-45 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D172_005525 fe4bf27411ffad0918bda5c934d6d9e2 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 D172_005525 fe4bf27411ffad0918bda5c934d6d9e2 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 104 1.6E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D172_005525 fe4bf27411ffad0918bda5c934d6d9e2 112 Gene3D G3DSA:3.30.70.120 1 112 2.4E-48 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal D172_005525 fe4bf27411ffad0918bda5c934d6d9e2 112 PIRSF PIRSF039144 1 112 9.2E-57 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D172_005525 fe4bf27411ffad0918bda5c934d6d9e2 112 SUPERFAMILY SSF54913 1 112 6.99E-46 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta D172_005525 fe4bf27411ffad0918bda5c934d6d9e2 112 SMART SM00938 4 105 3.3E-67 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D172_005525 fe4bf27411ffad0918bda5c934d6d9e2 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 D172_000265 abad6f8843f2a99a577e0804a6feb306 461 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 461 5.7E-254 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 D172_000265 abad6f8843f2a99a577e0804a6feb306 461 Gene3D G3DSA:2.40.10.170 2 76 8.5E-26 T 14-10-2018 D172_000265 abad6f8843f2a99a577e0804a6feb306 461 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 74 2.1E-17 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_000265 abad6f8843f2a99a577e0804a6feb306 461 SUPERFAMILY SSF52540 78 348 8.06E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_000265 abad6f8843f2a99a577e0804a6feb306 461 Gene3D G3DSA:3.40.50.300 77 345 1.5E-111 T 14-10-2018 D172_000265 abad6f8843f2a99a577e0804a6feb306 461 SMART SM00382 143 328 0.0023 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_000265 abad6f8843f2a99a577e0804a6feb306 461 SUPERFAMILY SSF50615 1 75 6.28E-23 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_000265 abad6f8843f2a99a577e0804a6feb306 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 343 6.6E-63 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_000265 abad6f8843f2a99a577e0804a6feb306 461 Gene3D G3DSA:1.10.1140.10 346 461 2.0E-58 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_000265 abad6f8843f2a99a577e0804a6feb306 461 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 461 55.915 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 D172_000265 abad6f8843f2a99a577e0804a6feb306 461 SUPERFAMILY SSF47917 346 460 3.14E-53 T 14-10-2018 D172_000265 abad6f8843f2a99a577e0804a6feb306 461 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 334 343 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_009000 4e1e3d9e037c3dd9926502dca3fc50f2 383 Pfam PF16113 Enoyl-CoA hydratase/isomerase 27 364 2.3E-111 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 D172_009000 4e1e3d9e037c3dd9926502dca3fc50f2 383 Gene3D G3DSA:3.90.226.10 12 380 2.9E-122 T 14-10-2018 D172_009000 4e1e3d9e037c3dd9926502dca3fc50f2 383 SUPERFAMILY SSF52096 25 350 4.24E-53 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_001720 f659820d5b0638d5a56d460149be77b7 615 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 307 1.8E-98 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 D172_001720 f659820d5b0638d5a56d460149be77b7 615 Gene3D G3DSA:3.30.230.10 217 326 1.6E-32 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D172_001720 f659820d5b0638d5a56d460149be77b7 615 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 2.2E-13 T 14-10-2018 D172_001720 f659820d5b0638d5a56d460149be77b7 615 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 614 22.499 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 D172_001720 f659820d5b0638d5a56d460149be77b7 615 Gene3D G3DSA:3.30.1370.100 488 570 9.2E-11 T 14-10-2018 D172_001720 f659820d5b0638d5a56d460149be77b7 615 SUPERFAMILY SSF118116 449 612 3.79E-24 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily D172_001720 f659820d5b0638d5a56d460149be77b7 615 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site D172_001720 f659820d5b0638d5a56d460149be77b7 615 SUPERFAMILY SSF55874 1 207 9.3E-56 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_001720 f659820d5b0638d5a56d460149be77b7 615 Pfam PF08676 MutL C terminal dimerisation domain 485 555 2.7E-8 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 D172_001720 f659820d5b0638d5a56d460149be77b7 615 SUPERFAMILY SSF54211 190 324 3.07E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_001720 f659820d5b0638d5a56d460149be77b7 615 Gene3D G3DSA:3.30.565.10 1 216 2.6E-72 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_001720 f659820d5b0638d5a56d460149be77b7 615 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 325 3.4E-31 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 D172_001720 f659820d5b0638d5a56d460149be77b7 615 SMART SM01340 212 327 4.1E-42 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 D172_009395 b16ef5037c5a4e66f5938263e780b688 255 Gene3D G3DSA:3.30.450.40 84 255 9.3E-26 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_009395 b16ef5037c5a4e66f5938263e780b688 255 SUPERFAMILY SSF46785 11 81 2.21E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_009395 b16ef5037c5a4e66f5938263e780b688 255 SUPERFAMILY SSF55781 76 253 2.88E-26 T 14-10-2018 D172_009395 b16ef5037c5a4e66f5938263e780b688 255 Gene3D G3DSA:1.10.10.10 10 83 5.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_009395 b16ef5037c5a4e66f5938263e780b688 255 SMART SM00346 11 101 3.8E-11 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 D172_009395 b16ef5037c5a4e66f5938263e780b688 255 Pfam PF01614 Bacterial transcriptional regulator 131 250 3.2E-13 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal D172_009395 b16ef5037c5a4e66f5938263e780b688 255 Pfam PF09339 IclR helix-turn-helix domain 13 62 1.9E-8 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 D172_005585 fbeba9691f5e8ee000565c99ee02d98f 178 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 10 178 2.3E-53 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 D172_005585 fbeba9691f5e8ee000565c99ee02d98f 178 Gene3D G3DSA:2.40.30.60 1 96 3.5E-30 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 D172_005585 fbeba9691f5e8ee000565c99ee02d98f 178 Pfam PF01782 RimM N-terminal domain 11 92 6.0E-25 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 D172_005585 fbeba9691f5e8ee000565c99ee02d98f 178 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 9 178 23.902 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 D172_005585 fbeba9691f5e8ee000565c99ee02d98f 178 SUPERFAMILY SSF50447 10 96 2.44E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D172_005585 fbeba9691f5e8ee000565c99ee02d98f 178 Pfam PF05239 PRC-barrel domain 100 173 8.1E-11 T 14-10-2018 IPR027275 PRC-barrel domain D172_005585 fbeba9691f5e8ee000565c99ee02d98f 178 Gene3D G3DSA:2.30.30.240 97 178 2.9E-30 T 14-10-2018 D172_005585 fbeba9691f5e8ee000565c99ee02d98f 178 SUPERFAMILY SSF50346 102 178 6.87E-19 T 14-10-2018 IPR011033 PRC-barrel-like superfamily D172_009630 4bf6b97ad185ad63e4e7770551f7ca4b 373 Gene3D G3DSA:3.40.50.720 178 316 6.5E-152 T 14-10-2018 D172_009630 4bf6b97ad185ad63e4e7770551f7ca4b 373 Gene3D G3DSA:3.90.180.10 10 368 6.5E-152 T 14-10-2018 D172_009630 4bf6b97ad185ad63e4e7770551f7ca4b 373 SUPERFAMILY SSF50129 3 191 5.48E-70 T 14-10-2018 IPR011032 GroES-like superfamily D172_009630 4bf6b97ad185ad63e4e7770551f7ca4b 373 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 158 6.4E-26 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D172_009630 4bf6b97ad185ad63e4e7770551f7ca4b 373 SMART SM00829 14 371 2.0E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D172_009630 4bf6b97ad185ad63e4e7770551f7ca4b 373 SUPERFAMILY SSF50129 322 373 3.72E-12 T 14-10-2018 IPR011032 GroES-like superfamily D172_009630 4bf6b97ad185ad63e4e7770551f7ca4b 373 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 65 79 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 D172_009630 4bf6b97ad185ad63e4e7770551f7ca4b 373 Pfam PF00107 Zinc-binding dehydrogenase 201 329 2.2E-25 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D172_009630 4bf6b97ad185ad63e4e7770551f7ca4b 373 SUPERFAMILY SSF51735 164 338 1.39E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_009630 4bf6b97ad185ad63e4e7770551f7ca4b 373 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 6 373 3.2E-224 T 14-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 D172_008360 48c5eca4380223e89e38faf815e3529e 388 Gene3D G3DSA:3.30.1490.20 21 104 2.3E-91 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D172_008360 48c5eca4380223e89e38faf815e3529e 388 SUPERFAMILY SSF52210 240 385 2.88E-54 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D172_008360 48c5eca4380223e89e38faf815e3529e 388 Pfam PF08442 ATP-grasp domain 2 203 8.2E-80 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D172_008360 48c5eca4380223e89e38faf815e3529e 388 SUPERFAMILY SSF56059 1 238 4.12E-81 T 14-10-2018 D172_008360 48c5eca4380223e89e38faf815e3529e 388 PIRSF PIRSF001554 1 388 3.1E-150 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D172_008360 48c5eca4380223e89e38faf815e3529e 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.124 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D172_008360 48c5eca4380223e89e38faf815e3529e 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 5.1E-172 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D172_008360 48c5eca4380223e89e38faf815e3529e 388 Gene3D G3DSA:3.40.50.261 240 388 7.0E-57 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D172_008360 48c5eca4380223e89e38faf815e3529e 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D172_008360 48c5eca4380223e89e38faf815e3529e 388 Pfam PF00549 CoA-ligase 262 382 1.8E-24 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D172_008360 48c5eca4380223e89e38faf815e3529e 388 Gene3D G3DSA:3.30.470.20 1 234 2.3E-91 T 14-10-2018 D172_001900 756709cc1dff7f6d60b8db8561af11a5 421 Pfam PF00563 EAL domain 172 204 4.9E-8 T 14-10-2018 IPR001633 EAL domain D172_001900 756709cc1dff7f6d60b8db8561af11a5 421 Pfam PF08668 HDOD domain 218 333 4.5E-11 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD D172_001900 756709cc1dff7f6d60b8db8561af11a5 421 Gene3D G3DSA:1.10.3210.10 213 377 7.2E-16 T 14-10-2018 D172_001900 756709cc1dff7f6d60b8db8561af11a5 421 SUPERFAMILY SSF109604 195 409 2.17E-32 T 14-10-2018 D172_001900 756709cc1dff7f6d60b8db8561af11a5 421 Gene3D G3DSA:3.20.20.450 2 149 4.1E-7 T 14-10-2018 IPR035919 EAL domain superfamily D172_001900 756709cc1dff7f6d60b8db8561af11a5 421 Gene3D G3DSA:3.20.20.450 164 212 7.4E-10 T 14-10-2018 IPR035919 EAL domain superfamily D172_001900 756709cc1dff7f6d60b8db8561af11a5 421 PIRSF PIRSF003180 12 419 8.6E-112 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing D172_001900 756709cc1dff7f6d60b8db8561af11a5 421 SUPERFAMILY SSF141868 16 205 3.53E-26 T 14-10-2018 IPR035919 EAL domain superfamily D172_001900 756709cc1dff7f6d60b8db8561af11a5 421 SMART SM00052 1 209 7.9E-4 T 14-10-2018 IPR001633 EAL domain D172_012660 f6b31fe9c1e2866c15116bf6a60d94dc 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.915 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 D172_012660 f6b31fe9c1e2866c15116bf6a60d94dc 185 Gene3D G3DSA:3.30.1360.40 31 105 1.1E-66 T 14-10-2018 D172_012660 f6b31fe9c1e2866c15116bf6a60d94dc 185 SUPERFAMILY SSF55194 2 184 1.14E-69 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 D172_012660 f6b31fe9c1e2866c15116bf6a60d94dc 185 Pfam PF01765 Ribosome recycling factor 22 183 9.0E-62 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 D172_012660 f6b31fe9c1e2866c15116bf6a60d94dc 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.1E-73 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 D172_012660 f6b31fe9c1e2866c15116bf6a60d94dc 185 Gene3D G3DSA:1.10.132.20 12 182 1.1E-66 T 14-10-2018 D172_004060 b451a3f43edfa3805cee9350b06d7969 398 SUPERFAMILY SSF103473 6 388 1.01E-40 T 14-10-2018 IPR036259 MFS transporter superfamily D172_004060 b451a3f43edfa3805cee9350b06d7969 398 Gene3D G3DSA:1.20.1250.20 203 389 1.1E-17 T 14-10-2018 D172_004060 b451a3f43edfa3805cee9350b06d7969 398 Gene3D G3DSA:1.20.1250.20 6 198 1.7E-12 T 14-10-2018 D172_004060 b451a3f43edfa3805cee9350b06d7969 398 Pfam PF07690 Major Facilitator Superfamily 26 350 7.7E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_001940 3dd7b4ca388d443bf3506e7dc595df33 695 Gene3D G3DSA:3.30.870.10 324 505 5.3E-71 T 14-10-2018 D172_001940 3dd7b4ca388d443bf3506e7dc595df33 695 PIRSF PIRSF015589 2 694 1.3E-236 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 D172_001940 3dd7b4ca388d443bf3506e7dc595df33 695 Gene3D G3DSA:3.30.1840.10 117 313 1.1E-63 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 D172_001940 3dd7b4ca388d443bf3506e7dc595df33 695 Gene3D G3DSA:1.20.58.310 15 116 2.4E-32 T 14-10-2018 D172_001940 3dd7b4ca388d443bf3506e7dc595df33 695 Pfam PF13089 Polyphosphate kinase N-terminal domain 13 116 2.8E-30 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 D172_001940 3dd7b4ca388d443bf3506e7dc595df33 695 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 13 683 6.1E-243 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 D172_001940 3dd7b4ca388d443bf3506e7dc595df33 695 SUPERFAMILY SSF56024 321 499 2.26E-51 T 14-10-2018 D172_001940 3dd7b4ca388d443bf3506e7dc595df33 695 Pfam PF02503 Polyphosphate kinase middle domain 128 326 1.5E-40 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 D172_001940 3dd7b4ca388d443bf3506e7dc595df33 695 SUPERFAMILY SSF56024 507 688 9.87E-68 T 14-10-2018 D172_001940 3dd7b4ca388d443bf3506e7dc595df33 695 SUPERFAMILY SSF143724 114 319 6.87E-54 T 14-10-2018 D172_001940 3dd7b4ca388d443bf3506e7dc595df33 695 Gene3D G3DSA:3.30.870.10 506 691 2.9E-70 T 14-10-2018 D172_001940 3dd7b4ca388d443bf3506e7dc595df33 695 SUPERFAMILY SSF140356 13 112 1.57E-29 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 D172_001940 3dd7b4ca388d443bf3506e7dc595df33 695 Pfam PF13090 Polyphosphate kinase C-terminal domain 336 682 5.5E-141 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 D172_001940 3dd7b4ca388d443bf3506e7dc595df33 695 Hamap MF_00347 Polyphosphate kinase [ppk]. 10 687 26.662 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 D172_008490 d5bd61ea27ae2d2fffc9d2ca1f247ebe 154 Pfam PF03061 Thioesterase superfamily 20 94 7.5E-20 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 D172_008490 d5bd61ea27ae2d2fffc9d2ca1f247ebe 154 SUPERFAMILY SSF54637 1 146 7.23E-41 T 14-10-2018 IPR029069 HotDog domain superfamily D172_008490 d5bd61ea27ae2d2fffc9d2ca1f247ebe 154 Gene3D G3DSA:3.10.129.10 1 151 3.8E-43 T 14-10-2018 D172_001475 376eef0ba3445dfd073445c1d39bf4b1 167 Pfam PF12802 MarR family 50 111 5.5E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_001475 376eef0ba3445dfd073445c1d39bf4b1 167 SMART SM00347 44 147 1.9E-26 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_001475 376eef0ba3445dfd073445c1d39bf4b1 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 4.8E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_001475 376eef0ba3445dfd073445c1d39bf4b1 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 4.8E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_001475 376eef0ba3445dfd073445c1d39bf4b1 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 137 157 4.8E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_001475 376eef0ba3445dfd073445c1d39bf4b1 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 4.8E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_001475 376eef0ba3445dfd073445c1d39bf4b1 167 Gene3D G3DSA:1.10.10.10 1 162 3.8E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_001475 376eef0ba3445dfd073445c1d39bf4b1 167 SUPERFAMILY SSF46785 10 158 1.54E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_001475 376eef0ba3445dfd073445c1d39bf4b1 167 ProSitePatterns PS01117 MarR-type HTH domain signature. 86 120 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site D172_005645 8a345ccbabaa2235d8179aa183b521db 298 SUPERFAMILY SSF103481 47 138 2.22E-8 T 14-10-2018 D172_005645 8a345ccbabaa2235d8179aa183b521db 298 Pfam PF00892 EamA-like transporter family 8 135 1.7E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_005645 8a345ccbabaa2235d8179aa183b521db 298 Pfam PF00892 EamA-like transporter family 147 279 5.3E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_005645 8a345ccbabaa2235d8179aa183b521db 298 SUPERFAMILY SSF103481 187 286 7.32E-9 T 14-10-2018 D172_007165 6a606d2c1c6ed648557ea6c7b359f318 585 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 400 412 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 D172_007165 6a606d2c1c6ed648557ea6c7b359f318 585 SUPERFAMILY SSF81606 16 249 8.24E-45 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D172_007165 6a606d2c1c6ed648557ea6c7b359f318 585 Pfam PF12330 Haspin like kinase domain 346 425 2.8E-7 T 14-10-2018 D172_007165 6a606d2c1c6ed648557ea6c7b359f318 585 SMART SM00332 8 246 6.0E-24 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D172_007165 6a606d2c1c6ed648557ea6c7b359f318 585 SMART SM00220 281 548 2.6E-12 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 D172_007165 6a606d2c1c6ed648557ea6c7b359f318 585 Gene3D G3DSA:3.60.40.10 3 251 9.2E-44 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D172_007165 6a606d2c1c6ed648557ea6c7b359f318 585 Gene3D G3DSA:3.30.200.20 271 360 6.9E-6 T 14-10-2018 D172_007165 6a606d2c1c6ed648557ea6c7b359f318 585 SUPERFAMILY SSF56112 264 543 4.59E-50 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily D172_007165 6a606d2c1c6ed648557ea6c7b359f318 585 SMART SM00331 30 248 1.0E-8 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D172_007165 6a606d2c1c6ed648557ea6c7b359f318 585 Gene3D G3DSA:1.10.510.10 362 553 6.5E-33 T 14-10-2018 D172_007165 6a606d2c1c6ed648557ea6c7b359f318 585 Pfam PF13672 Protein phosphatase 2C 30 213 1.3E-11 T 14-10-2018 D172_007165 6a606d2c1c6ed648557ea6c7b359f318 585 Pfam PF00069 Protein kinase domain 291 487 1.1E-30 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 D172_004495 c5b018f09952b06fd7d62594e398900a 461 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 456 1.6E-129 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 D172_004495 c5b018f09952b06fd7d62594e398900a 461 SMART SM00382 94 249 5.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_004495 c5b018f09952b06fd7d62594e398900a 461 PRINTS PR01874 DNA repair protein radA signature 179 203 1.8E-61 T 14-10-2018 D172_004495 c5b018f09952b06fd7d62594e398900a 461 PRINTS PR01874 DNA repair protein radA signature 252 278 1.8E-61 T 14-10-2018 D172_004495 c5b018f09952b06fd7d62594e398900a 461 PRINTS PR01874 DNA repair protein radA signature 86 114 1.8E-61 T 14-10-2018 D172_004495 c5b018f09952b06fd7d62594e398900a 461 PRINTS PR01874 DNA repair protein radA signature 326 349 1.8E-61 T 14-10-2018 D172_004495 c5b018f09952b06fd7d62594e398900a 461 PRINTS PR01874 DNA repair protein radA signature 127 144 1.8E-61 T 14-10-2018 D172_004495 c5b018f09952b06fd7d62594e398900a 461 PRINTS PR01874 DNA repair protein radA signature 218 246 1.8E-61 T 14-10-2018 D172_004495 c5b018f09952b06fd7d62594e398900a 461 PRINTS PR01874 DNA repair protein radA signature 11 35 1.8E-61 T 14-10-2018 D172_004495 c5b018f09952b06fd7d62594e398900a 461 Gene3D G3DSA:3.40.50.300 70 286 1.1E-33 T 14-10-2018 D172_004495 c5b018f09952b06fd7d62594e398900a 461 SUPERFAMILY SSF52540 76 295 6.12E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_004495 c5b018f09952b06fd7d62594e398900a 461 SUPERFAMILY SSF54211 259 460 2.96E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_004495 c5b018f09952b06fd7d62594e398900a 461 Pfam PF13481 AAA domain 70 227 5.0E-17 T 14-10-2018 D172_004495 c5b018f09952b06fd7d62594e398900a 461 Pfam PF13541 Subunit ChlI of Mg-chelatase 373 435 5.7E-9 T 14-10-2018 D172_004495 c5b018f09952b06fd7d62594e398900a 461 Gene3D G3DSA:3.30.230.10 349 461 1.5E-14 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D172_019385 76da587c24428f4cb3af2b6d87bdfc1e 434 SMART SM00490 257 338 2.2E-32 T 14-10-2018 IPR001650 Helicase, C-terminal D172_019385 76da587c24428f4cb3af2b6d87bdfc1e 434 SMART SM00487 20 221 7.1E-63 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_019385 76da587c24428f4cb3af2b6d87bdfc1e 434 Gene3D G3DSA:3.40.50.300 1 216 3.7E-78 T 14-10-2018 D172_019385 76da587c24428f4cb3af2b6d87bdfc1e 434 Pfam PF00270 DEAD/DEAH box helicase 25 194 4.5E-54 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D172_019385 76da587c24428f4cb3af2b6d87bdfc1e 434 Gene3D G3DSA:3.40.50.300 217 384 2.1E-49 T 14-10-2018 D172_019385 76da587c24428f4cb3af2b6d87bdfc1e 434 Pfam PF00271 Helicase conserved C-terminal domain 231 338 1.1E-28 T 14-10-2018 IPR001650 Helicase, C-terminal D172_019385 76da587c24428f4cb3af2b6d87bdfc1e 434 SUPERFAMILY SSF52540 23 99 5.31E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_019385 76da587c24428f4cb3af2b6d87bdfc1e 434 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D172_019385 76da587c24428f4cb3af2b6d87bdfc1e 434 SUPERFAMILY SSF52540 74 357 4.16E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_015520 b0d8a0d4ab12e1d86c48fa79e76f811d 331 Gene3D G3DSA:1.10.260.40 1 59 1.1E-20 T 14-10-2018 D172_015520 b0d8a0d4ab12e1d86c48fa79e76f811d 331 Gene3D G3DSA:3.40.50.2300 160 295 1.6E-48 T 14-10-2018 D172_015520 b0d8a0d4ab12e1d86c48fa79e76f811d 331 SUPERFAMILY SSF53822 71 330 9.03E-46 T 14-10-2018 IPR028082 Periplasmic binding protein-like I D172_015520 b0d8a0d4ab12e1d86c48fa79e76f811d 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.4E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_015520 b0d8a0d4ab12e1d86c48fa79e76f811d 331 SMART SM00354 1 70 2.9E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_015520 b0d8a0d4ab12e1d86c48fa79e76f811d 331 Gene3D G3DSA:3.40.50.2300 70 312 1.6E-48 T 14-10-2018 D172_015520 b0d8a0d4ab12e1d86c48fa79e76f811d 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 311 6.6E-28 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain D172_015520 b0d8a0d4ab12e1d86c48fa79e76f811d 331 SUPERFAMILY SSF47413 1 59 8.44E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D172_013970 2ddb8cac10aeab5a95ab24427dc7573a 255 Hamap MF_00082 Acetylglutamate kinase [argB]. 3 248 35.43 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D172_013970 2ddb8cac10aeab5a95ab24427dc7573a 255 Gene3D G3DSA:3.40.1160.10 1 254 7.3E-64 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D172_013970 2ddb8cac10aeab5a95ab24427dc7573a 255 TIGRFAM TIGR00761 argB: acetylglutamate kinase 6 231 3.8E-51 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D172_013970 2ddb8cac10aeab5a95ab24427dc7573a 255 SUPERFAMILY SSF53633 2 255 3.01E-58 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D172_013970 2ddb8cac10aeab5a95ab24427dc7573a 255 PIRSF PIRSF000728 1 255 3.9E-62 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D172_013970 2ddb8cac10aeab5a95ab24427dc7573a 255 Pfam PF00696 Amino acid kinase family 4 231 5.1E-34 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D172_001565 1b9a469fbf1f7a7fcfee14dcd3c9ebcf 250 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 13 223 3.3E-53 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 D172_001565 1b9a469fbf1f7a7fcfee14dcd3c9ebcf 250 Pfam PF01791 DeoC/LacD family aldolase 13 240 1.6E-29 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 D172_001565 1b9a469fbf1f7a7fcfee14dcd3c9ebcf 250 SUPERFAMILY SSF51569 12 244 7.01E-69 T 14-10-2018 D172_001565 1b9a469fbf1f7a7fcfee14dcd3c9ebcf 250 PIRSF PIRSF001357 4 250 3.7E-66 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 D172_001565 1b9a469fbf1f7a7fcfee14dcd3c9ebcf 250 SMART SM01133 10 243 7.0E-62 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 D172_001565 1b9a469fbf1f7a7fcfee14dcd3c9ebcf 250 Gene3D G3DSA:3.20.20.70 1 247 2.6E-82 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_019485 48a9ca879a4bf5ddf32ade7eb35c476d 100 Gene3D G3DSA:2.60.40.10 6 99 9.4E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_019485 48a9ca879a4bf5ddf32ade7eb35c476d 100 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 15 95 1.1E-7 T 14-10-2018 IPR032640 AMP-activated protein kinase, glycogen-binding domain Reactome: R-HSA-1445148|Reactome: R-HSA-1632852|Reactome: R-HSA-2151209|Reactome: R-HSA-380972|Reactome: R-HSA-5628897|Reactome: R-HSA-6804756 D172_019485 48a9ca879a4bf5ddf32ade7eb35c476d 100 SUPERFAMILY SSF81296 15 97 1.71E-15 T 14-10-2018 IPR014756 Immunoglobulin E-set D172_006995 f6ac1611c7dcfb5242d381b828f18425 338 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 8.9E-97 T 14-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 D172_003455 235ab2b66b6bf6565b1b47fcbbbf6ce3 259 Pfam PF02405 Permease MlaE 44 254 2.4E-74 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 D172_003455 235ab2b66b6bf6565b1b47fcbbbf6ce3 259 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 6 257 2.4E-95 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria D172_009570 dc327ed647bc380c5ee6f234fb0a6f03 119 Gene3D G3DSA:1.10.720.90 2 55 4.5E-24 T 14-10-2018 D172_009570 dc327ed647bc380c5ee6f234fb0a6f03 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.7E-51 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_009570 dc327ed647bc380c5ee6f234fb0a6f03 119 SUPERFAMILY SSF74731 3 115 9.55E-50 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_009570 dc327ed647bc380c5ee6f234fb0a6f03 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_009570 dc327ed647bc380c5ee6f234fb0a6f03 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 1.0E-22 T 14-10-2018 D172_009570 dc327ed647bc380c5ee6f234fb0a6f03 119 Pfam PF00453 Ribosomal protein L20 3 109 1.4E-48 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_009570 dc327ed647bc380c5ee6f234fb0a6f03 119 Gene3D G3DSA:1.10.1900.20 56 118 4.5E-29 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_009570 dc327ed647bc380c5ee6f234fb0a6f03 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.5E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_009570 dc327ed647bc380c5ee6f234fb0a6f03 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.5E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_009570 dc327ed647bc380c5ee6f234fb0a6f03 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.5E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_009570 dc327ed647bc380c5ee6f234fb0a6f03 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.621 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_019790 18a69fde4e057cb40d28ba2bb389ec5a 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 1.4E-53 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 D172_019790 18a69fde4e057cb40d28ba2bb389ec5a 299 Gene3D G3DSA:3.40.190.10 7 220 2.0E-66 T 14-10-2018 D172_019790 18a69fde4e057cb40d28ba2bb389ec5a 299 SUPERFAMILY SSF53850 6 223 1.86E-65 T 14-10-2018 D172_019790 18a69fde4e057cb40d28ba2bb389ec5a 299 Gene3D G3DSA:3.40.190.10 102 191 2.0E-66 T 14-10-2018 D172_019790 18a69fde4e057cb40d28ba2bb389ec5a 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 D172_019790 18a69fde4e057cb40d28ba2bb389ec5a 299 Pfam PF08029 HisG, C-terminal domain 223 296 4.0E-23 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 D172_019790 18a69fde4e057cb40d28ba2bb389ec5a 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 199 298 1.8E-28 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 D172_019790 18a69fde4e057cb40d28ba2bb389ec5a 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 33.112 T 14-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 D172_019790 18a69fde4e057cb40d28ba2bb389ec5a 299 SUPERFAMILY SSF54913 226 298 3.67E-21 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta D172_019790 18a69fde4e057cb40d28ba2bb389ec5a 299 Gene3D G3DSA:3.30.70.120 226 299 1.9E-31 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal D172_019790 18a69fde4e057cb40d28ba2bb389ec5a 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 1.3E-45 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 D172_009535 794a2c2dab4f6322e1c6e8ba7b7ddcd5 457 SUPERFAMILY SSF51735 1 169 3.82E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_009535 794a2c2dab4f6322e1c6e8ba7b7ddcd5 457 PIRSF PIRSF000109 1 457 1.9E-116 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D172_009535 794a2c2dab4f6322e1c6e8ba7b7ddcd5 457 Gene3D G3DSA:3.40.50.720 1 182 2.7E-38 T 14-10-2018 D172_009535 794a2c2dab4f6322e1c6e8ba7b7ddcd5 457 Gene3D G3DSA:1.10.1040.10 183 417 6.6E-68 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 D172_009535 794a2c2dab4f6322e1c6e8ba7b7ddcd5 457 SUPERFAMILY SSF48179 178 443 6.33E-80 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_009535 794a2c2dab4f6322e1c6e8ba7b7ddcd5 457 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 120 145 1.9E-52 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D172_009535 794a2c2dab4f6322e1c6e8ba7b7ddcd5 457 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 353 375 1.9E-52 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D172_009535 794a2c2dab4f6322e1c6e8ba7b7ddcd5 457 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.9E-52 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D172_009535 794a2c2dab4f6322e1c6e8ba7b7ddcd5 457 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.9E-52 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D172_009535 794a2c2dab4f6322e1c6e8ba7b7ddcd5 457 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 23 1.9E-52 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D172_009535 794a2c2dab4f6322e1c6e8ba7b7ddcd5 457 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 67 96 1.9E-52 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D172_009535 794a2c2dab4f6322e1c6e8ba7b7ddcd5 457 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 440 1.7E-76 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D172_009535 794a2c2dab4f6322e1c6e8ba7b7ddcd5 457 SMART SM01350 179 443 4.9E-92 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 D172_009535 794a2c2dab4f6322e1c6e8ba7b7ddcd5 457 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 163 4.4E-33 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 D172_002705 e9aa8555ba460147a769ff87a0e28be3 237 Pfam PF01168 Alanine racemase, N-terminal domain 35 236 1.2E-30 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D172_002705 e9aa8555ba460147a769ff87a0e28be3 237 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 10 236 5.4E-88 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 D172_002705 e9aa8555ba460147a769ff87a0e28be3 237 PIRSF PIRSF004848 5 237 9.7E-80 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 D172_002705 e9aa8555ba460147a769ff87a0e28be3 237 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 86 100 - T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 D172_002705 e9aa8555ba460147a769ff87a0e28be3 237 SUPERFAMILY SSF51419 7 234 4.06E-81 T 14-10-2018 IPR029066 PLP-binding barrel D172_002705 e9aa8555ba460147a769ff87a0e28be3 237 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 15 235 33.634 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 D172_002705 e9aa8555ba460147a769ff87a0e28be3 237 Gene3D G3DSA:3.20.20.10 2 237 2.0E-85 T 14-10-2018 IPR029066 PLP-binding barrel D172_014160 54994874f78e57ffbab2aaed051ef281 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 313 2.4E-49 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 D172_014160 54994874f78e57ffbab2aaed051ef281 352 Gene3D G3DSA:3.40.50.2000 160 350 9.9E-41 T 14-10-2018 D172_014160 54994874f78e57ffbab2aaed051ef281 352 SUPERFAMILY SSF53756 9 347 7.85E-80 T 14-10-2018 D172_014160 54994874f78e57ffbab2aaed051ef281 352 Gene3D G3DSA:3.40.50.2000 9 156 6.9E-28 T 14-10-2018 D172_018315 dfc18844692e2886306b0bf15bb08bf6 485 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 204 457 3.2E-52 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 D172_018315 dfc18844692e2886306b0bf15bb08bf6 485 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 1.4E-24 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 D172_018315 dfc18844692e2886306b0bf15bb08bf6 485 SUPERFAMILY SSF51735 2 257 4.72E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_018315 dfc18844692e2886306b0bf15bb08bf6 485 SUPERFAMILY SSF48179 273 483 9.86E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_018315 dfc18844692e2886306b0bf15bb08bf6 485 Gene3D G3DSA:3.40.50.720 2 263 6.1E-52 T 14-10-2018 D172_018315 dfc18844692e2886306b0bf15bb08bf6 485 Gene3D G3DSA:1.10.1040.10 272 482 1.4E-47 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 D172_014605 695519fd60bb8747b48c99c4d78dec16 298 SMART SM00342 210 293 2.5E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_014605 695519fd60bb8747b48c99c4d78dec16 298 SUPERFAMILY SSF46689 193 244 8.51E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_014605 695519fd60bb8747b48c99c4d78dec16 298 SUPERFAMILY SSF46689 246 295 1.03E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_014605 695519fd60bb8747b48c99c4d78dec16 298 Pfam PF06719 AraC-type transcriptional regulator N-terminus 28 181 1.4E-34 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal D172_014605 695519fd60bb8747b48c99c4d78dec16 298 Pfam PF12833 Helix-turn-helix domain 216 294 6.6E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_014605 695519fd60bb8747b48c99c4d78dec16 298 Gene3D G3DSA:1.10.10.60 189 297 1.4E-27 T 14-10-2018 D172_002225 dd2e666b44fd5a9c8595b6e1f351cbca 514 PIRSF PIRSF001492 1 514 1.9E-200 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_002225 dd2e666b44fd5a9c8595b6e1f351cbca 514 Gene3D G3DSA:3.40.1450.10 79 313 6.8E-212 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_002225 dd2e666b44fd5a9c8595b6e1f351cbca 514 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 511 8.6E-223 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_002225 dd2e666b44fd5a9c8595b6e1f351cbca 514 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 300 3.4E-79 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_002225 dd2e666b44fd5a9c8595b6e1f351cbca 514 Pfam PF01676 Metalloenzyme superfamily 6 500 2.1E-80 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 D172_002225 dd2e666b44fd5a9c8595b6e1f351cbca 514 Gene3D G3DSA:3.40.720.10 7 508 6.8E-212 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D172_002225 dd2e666b44fd5a9c8595b6e1f351cbca 514 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 512 49.342 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_002225 dd2e666b44fd5a9c8595b6e1f351cbca 514 SUPERFAMILY SSF64158 79 311 6.28E-83 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_002225 dd2e666b44fd5a9c8595b6e1f351cbca 514 SUPERFAMILY SSF53649 5 510 1.57E-73 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D172_015080 5af0cd6319142a31c9177bc7c754fd7c 226 Gene3D G3DSA:4.10.860.20 180 226 8.1E-20 T 14-10-2018 D172_015080 5af0cd6319142a31c9177bc7c754fd7c 226 SMART SM00702 1 177 2.2E-25 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 D172_015080 5af0cd6319142a31c9177bc7c754fd7c 226 Gene3D G3DSA:2.60.120.620 1 178 3.0E-45 T 14-10-2018 D172_015080 5af0cd6319142a31c9177bc7c754fd7c 226 SUPERFAMILY SSF51197 3 176 5.15E-7 T 14-10-2018 D172_015080 5af0cd6319142a31c9177bc7c754fd7c 226 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 4.5E-15 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 D172_015080 5af0cd6319142a31c9177bc7c754fd7c 226 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 226 46.097 T 14-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 D172_009810 0c5a8c9f417fd5eb2c1f225cdd16a58c 850 SUPERFAMILY SSF52279 423 642 6.93E-46 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 D172_009810 0c5a8c9f417fd5eb2c1f225cdd16a58c 850 Gene3D G3DSA:3.40.50.1700 409 645 1.5E-67 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 D172_009810 0c5a8c9f417fd5eb2c1f225cdd16a58c 850 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 431 642 2.9E-30 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 D172_009810 0c5a8c9f417fd5eb2c1f225cdd16a58c 850 PRINTS PR00133 Glycosyl hydrolase family 3 signature 195 211 8.4E-22 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_009810 0c5a8c9f417fd5eb2c1f225cdd16a58c 850 PRINTS PR00133 Glycosyl hydrolase family 3 signature 125 141 8.4E-22 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_009810 0c5a8c9f417fd5eb2c1f225cdd16a58c 850 PRINTS PR00133 Glycosyl hydrolase family 3 signature 149 168 8.4E-22 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_009810 0c5a8c9f417fd5eb2c1f225cdd16a58c 850 PRINTS PR00133 Glycosyl hydrolase family 3 signature 305 323 8.4E-22 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_009810 0c5a8c9f417fd5eb2c1f225cdd16a58c 850 PRINTS PR00133 Glycosyl hydrolase family 3 signature 235 251 8.4E-22 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_009810 0c5a8c9f417fd5eb2c1f225cdd16a58c 850 Gene3D G3DSA:3.20.20.300 44 407 5.2E-146 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 D172_009810 0c5a8c9f417fd5eb2c1f225cdd16a58c 850 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 60 381 1.1E-83 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_009810 0c5a8c9f417fd5eb2c1f225cdd16a58c 850 Gene3D G3DSA:2.60.120.430 661 850 4.8E-42 T 14-10-2018 D172_009810 0c5a8c9f417fd5eb2c1f225cdd16a58c 850 SUPERFAMILY SSF51445 40 422 8.63E-106 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_015525 ade34ae01d0b8989918476c71d595dfc 407 SUPERFAMILY SSF103473 8 398 3.66E-36 T 14-10-2018 IPR036259 MFS transporter superfamily D172_015525 ade34ae01d0b8989918476c71d595dfc 407 Pfam PF01306 LacY proton/sugar symporter 5 397 4.0E-118 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 D172_015525 ade34ae01d0b8989918476c71d595dfc 407 Gene3D G3DSA:1.20.1250.20 198 397 6.1E-54 T 14-10-2018 D172_015525 ade34ae01d0b8989918476c71d595dfc 407 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 6 395 9.7E-119 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 D172_015525 ade34ae01d0b8989918476c71d595dfc 407 Gene3D G3DSA:1.20.1250.20 3 194 4.6E-31 T 14-10-2018 D172_015525 ade34ae01d0b8989918476c71d595dfc 407 PRINTS PR00174 LacY proton/sugar symporter family signature 208 236 1.2E-69 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 D172_015525 ade34ae01d0b8989918476c71d595dfc 407 PRINTS PR00174 LacY proton/sugar symporter family signature 67 96 1.2E-69 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 D172_015525 ade34ae01d0b8989918476c71d595dfc 407 PRINTS PR00174 LacY proton/sugar symporter family signature 309 328 1.2E-69 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 D172_015525 ade34ae01d0b8989918476c71d595dfc 407 PRINTS PR00174 LacY proton/sugar symporter family signature 278 304 1.2E-69 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 D172_015525 ade34ae01d0b8989918476c71d595dfc 407 PRINTS PR00174 LacY proton/sugar symporter family signature 144 162 1.2E-69 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 D172_015525 ade34ae01d0b8989918476c71d595dfc 407 PRINTS PR00174 LacY proton/sugar symporter family signature 254 275 1.2E-69 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 D172_015525 ade34ae01d0b8989918476c71d595dfc 407 PRINTS PR00174 LacY proton/sugar symporter family signature 102 124 1.2E-69 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 D172_015525 ade34ae01d0b8989918476c71d595dfc 407 PRINTS PR00174 LacY proton/sugar symporter family signature 340 360 1.2E-69 T 14-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 D172_012055 ef2e2b607a7bb6d94845527679124eb8 520 Pfam PF00795 Carbon-nitrogen hydrolase 236 487 1.1E-28 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 D172_012055 ef2e2b607a7bb6d94845527679124eb8 520 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 75 465 1.5E-81 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 D172_012055 ef2e2b607a7bb6d94845527679124eb8 520 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 17 506 21.076 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 D172_012055 ef2e2b607a7bb6d94845527679124eb8 520 SUPERFAMILY SSF56317 228 498 6.93E-39 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D172_012055 ef2e2b607a7bb6d94845527679124eb8 520 Gene3D G3DSA:3.60.110.10 229 498 5.8E-13 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D172_011300 c20534a4351087b991bbda492924d150 548 Gene3D G3DSA:1.10.1390.10 505 546 7.8E-18 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_011300 c20534a4351087b991bbda492924d150 548 SUPERFAMILY SSF53697 3 546 5.84E-202 T 14-10-2018 D172_011300 c20534a4351087b991bbda492924d150 548 Gene3D G3DSA:3.40.50.10490 10 504 9.0E-216 T 14-10-2018 D172_011300 c20534a4351087b991bbda492924d150 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 495 512 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_011300 c20534a4351087b991bbda492924d150 548 Gene3D G3DSA:3.40.50.10490 95 289 9.0E-216 T 14-10-2018 D172_011300 c20534a4351087b991bbda492924d150 548 Pfam PF00342 Phosphoglucose isomerase 49 539 6.3E-214 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_011300 c20534a4351087b991bbda492924d150 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 2.1E-49 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_011300 c20534a4351087b991bbda492924d150 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 2.1E-49 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_011300 c20534a4351087b991bbda492924d150 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 463 481 2.1E-49 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_011300 c20534a4351087b991bbda492924d150 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 2.1E-49 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_011300 c20534a4351087b991bbda492924d150 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 495 2.1E-49 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_011300 c20534a4351087b991bbda492924d150 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 495 508 2.1E-49 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_011300 c20534a4351087b991bbda492924d150 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 522 38.415 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_011300 c20534a4351087b991bbda492924d150 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_002535 813d438ceb46d86a0c6c9ac28eeaac3f 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 113 3.8E-28 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 D172_002535 813d438ceb46d86a0c6c9ac28eeaac3f 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 41.114 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 D172_002535 813d438ceb46d86a0c6c9ac28eeaac3f 269 SUPERFAMILY SSF46946 130 221 1.44E-27 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 D172_002535 813d438ceb46d86a0c6c9ac28eeaac3f 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 6.7E-89 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 D172_002535 813d438ceb46d86a0c6c9ac28eeaac3f 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 6.1E-26 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 D172_002535 813d438ceb46d86a0c6c9ac28eeaac3f 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 1.8E-8 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 D172_002535 813d438ceb46d86a0c6c9ac28eeaac3f 269 Gene3D G3DSA:3.20.190.10 2 128 3.1E-37 T 14-10-2018 IPR035937 MutM-like, N-terminal D172_002535 813d438ceb46d86a0c6c9ac28eeaac3f 269 SUPERFAMILY SSF81624 2 138 2.09E-39 T 14-10-2018 IPR035937 MutM-like, N-terminal D172_002535 813d438ceb46d86a0c6c9ac28eeaac3f 269 SMART SM00898 2 115 6.9E-46 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 D172_002535 813d438ceb46d86a0c6c9ac28eeaac3f 269 SUPERFAMILY SSF57716 217 269 4.85E-16 T 14-10-2018 D172_002535 813d438ceb46d86a0c6c9ac28eeaac3f 269 SMART SM01232 129 221 1.2E-41 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 D172_002535 813d438ceb46d86a0c6c9ac28eeaac3f 269 Gene3D G3DSA:1.10.8.50 131 269 6.3E-45 T 14-10-2018 D172_000125 e1e4138adb64ad0945dfde2176bb9590 719 SUPERFAMILY SSF51735 313 496 7.24E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_000125 e1e4138adb64ad0945dfde2176bb9590 719 SUPERFAMILY SSF48179 496 609 2.3E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_000125 e1e4138adb64ad0945dfde2176bb9590 719 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D172_000125 e1e4138adb64ad0945dfde2176bb9590 719 Gene3D G3DSA:3.40.50.720 314 497 1.8E-62 T 14-10-2018 D172_000125 e1e4138adb64ad0945dfde2176bb9590 719 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 202 4.4E-40 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 D172_000125 e1e4138adb64ad0945dfde2176bb9590 719 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 3.8E-56 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D172_000125 e1e4138adb64ad0945dfde2176bb9590 719 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 3.1E-23 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D172_000125 e1e4138adb64ad0945dfde2176bb9590 719 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 692 1.0E-4 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D172_000125 e1e4138adb64ad0945dfde2176bb9590 719 SUPERFAMILY SSF48179 625 716 8.5E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_000125 e1e4138adb64ad0945dfde2176bb9590 719 Gene3D G3DSA:1.10.1040.50 498 710 1.8E-69 T 14-10-2018 D172_000125 e1e4138adb64ad0945dfde2176bb9590 719 SUPERFAMILY SSF52096 3 303 3.22E-63 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_000125 e1e4138adb64ad0945dfde2176bb9590 719 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 D172_000125 e1e4138adb64ad0945dfde2176bb9590 719 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 14-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D172_000125 e1e4138adb64ad0945dfde2176bb9590 719 Gene3D G3DSA:3.90.226.10 1 312 2.2E-91 T 14-10-2018 D172_003875 b05d0926d2886680426eac14dc6b0795 725 Pfam PF01590 GAF domain 28 154 6.8E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_003875 b05d0926d2886680426eac14dc6b0795 725 Gene3D G3DSA:3.30.565.10 260 423 7.6E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_003875 b05d0926d2886680426eac14dc6b0795 725 SMART SM00065 26 168 3.6E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_003875 b05d0926d2886680426eac14dc6b0795 725 Gene3D G3DSA:1.10.287.130 180 259 7.6E-21 T 14-10-2018 D172_003875 b05d0926d2886680426eac14dc6b0795 725 SUPERFAMILY SSF55781 28 166 8.29E-22 T 14-10-2018 D172_003875 b05d0926d2886680426eac14dc6b0795 725 Pfam PF00072 Response regulator receiver domain 443 553 1.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_003875 b05d0926d2886680426eac14dc6b0795 725 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 306 417 2.1E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_003875 b05d0926d2886680426eac14dc6b0795 725 Gene3D G3DSA:3.30.450.40 570 722 8.1E-6 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_003875 b05d0926d2886680426eac14dc6b0795 725 SMART SM00448 441 554 3.0E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_003875 b05d0926d2886680426eac14dc6b0795 725 SUPERFAMILY SSF52172 437 555 9.82E-37 T 14-10-2018 IPR011006 CheY-like superfamily D172_003875 b05d0926d2886680426eac14dc6b0795 725 SUPERFAMILY SSF47384 180 260 1.37E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_003875 b05d0926d2886680426eac14dc6b0795 725 SMART SM00388 194 259 3.8E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_003875 b05d0926d2886680426eac14dc6b0795 725 SUPERFAMILY SSF55781 581 719 1.55E-7 T 14-10-2018 D172_003875 b05d0926d2886680426eac14dc6b0795 725 SMART SM00387 306 422 1.1E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_003875 b05d0926d2886680426eac14dc6b0795 725 SUPERFAMILY SSF55874 248 415 1.44E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_003875 b05d0926d2886680426eac14dc6b0795 725 Gene3D G3DSA:3.40.50.2300 426 562 1.0E-38 T 14-10-2018 D172_003875 b05d0926d2886680426eac14dc6b0795 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 9.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_003875 b05d0926d2886680426eac14dc6b0795 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 419 9.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_003875 b05d0926d2886680426eac14dc6b0795 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 375 9.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_003875 b05d0926d2886680426eac14dc6b0795 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 400 9.1E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_003875 b05d0926d2886680426eac14dc6b0795 725 Gene3D G3DSA:3.30.450.40 11 175 2.3E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_003875 b05d0926d2886680426eac14dc6b0795 725 Pfam PF00512 His Kinase A (phospho-acceptor) domain 195 259 1.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_011305 943bf6fde60195a4e3dc2a42dca6f6e7 751 Gene3D G3DSA:3.90.1150.10 14 387 4.2E-102 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_011305 943bf6fde60195a4e3dc2a42dca6f6e7 751 Pfam PF00581 Rhodanese-like domain 654 747 1.6E-8 T 14-10-2018 IPR001763 Rhodanese-like domain D172_011305 943bf6fde60195a4e3dc2a42dca6f6e7 751 Gene3D G3DSA:3.60.15.10 413 637 2.5E-28 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_011305 943bf6fde60195a4e3dc2a42dca6f6e7 751 SMART SM00849 426 585 1.3E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_011305 943bf6fde60195a4e3dc2a42dca6f6e7 751 SUPERFAMILY SSF56281 424 587 5.6E-19 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_011305 943bf6fde60195a4e3dc2a42dca6f6e7 751 SUPERFAMILY SSF53383 13 391 8.56E-72 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_011305 943bf6fde60195a4e3dc2a42dca6f6e7 751 Gene3D G3DSA:3.40.250.10 642 749 2.3E-16 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily D172_011305 943bf6fde60195a4e3dc2a42dca6f6e7 751 SUPERFAMILY SSF52821 647 747 5.62E-17 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily D172_011305 943bf6fde60195a4e3dc2a42dca6f6e7 751 Gene3D G3DSA:1.10.260.50 25 299 4.2E-102 T 14-10-2018 D172_011305 943bf6fde60195a4e3dc2a42dca6f6e7 751 Gene3D G3DSA:3.40.640.10 71 252 4.2E-102 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_011305 943bf6fde60195a4e3dc2a42dca6f6e7 751 SMART SM00450 651 750 7.5E-4 T 14-10-2018 IPR001763 Rhodanese-like domain D172_011305 943bf6fde60195a4e3dc2a42dca6f6e7 751 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 210 229 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site D172_011305 943bf6fde60195a4e3dc2a42dca6f6e7 751 Pfam PF00266 Aminotransferase class-V 14 384 1.5E-55 T 14-10-2018 IPR000192 Aminotransferase class V domain D172_018740 5c193ccfcc553c26b8a88dd3a60a0c81 885 SUPERFAMILY SSF56935 46 885 6.0E-102 T 14-10-2018 D172_018740 5c193ccfcc553c26b8a88dd3a60a0c81 885 Pfam PF00593 TonB dependent receptor 403 878 3.1E-36 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_018740 5c193ccfcc553c26b8a88dd3a60a0c81 885 Gene3D G3DSA:2.170.130.10 40 186 4.3E-30 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_018740 5c193ccfcc553c26b8a88dd3a60a0c81 885 Gene3D G3DSA:2.40.170.20 415 885 2.2E-53 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_018740 5c193ccfcc553c26b8a88dd3a60a0c81 885 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 182 4.0E-20 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_019475 170b37c1127b5a1f6734ae5e93da85e0 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 1.4E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_019475 170b37c1127b5a1f6734ae5e93da85e0 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 1.4E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_019475 170b37c1127b5a1f6734ae5e93da85e0 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 1.4E-9 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_019475 170b37c1127b5a1f6734ae5e93da85e0 142 SUPERFAMILY SSF46785 3 56 1.85E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_019475 170b37c1127b5a1f6734ae5e93da85e0 142 Gene3D G3DSA:3.30.70.920 57 142 1.1E-15 T 14-10-2018 D172_019475 170b37c1127b5a1f6734ae5e93da85e0 142 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 49 4.6E-13 T 14-10-2018 D172_019475 170b37c1127b5a1f6734ae5e93da85e0 142 SMART SM00344 6 108 2.3E-16 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 D172_019475 170b37c1127b5a1f6734ae5e93da85e0 142 Gene3D G3DSA:1.10.10.10 4 53 1.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_019475 170b37c1127b5a1f6734ae5e93da85e0 142 SUPERFAMILY SSF54909 63 138 9.65E-14 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel D172_019475 170b37c1127b5a1f6734ae5e93da85e0 142 Pfam PF01037 Lrp/AsnC ligand binding domain 68 138 9.3E-15 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D172_001470 ce9cd1c57e7f26501c44a3cb24619cad 1292 SMART SM00823 Phosphopantetheine attachment site 944 1013 0.0028 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D172_001470 ce9cd1c57e7f26501c44a3cb24619cad 1292 Pfam PF00550 Phosphopantetheine attachment site 945 1009 1.5E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain D172_001470 ce9cd1c57e7f26501c44a3cb24619cad 1292 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 54 456 9.6E-116 T 14-10-2018 IPR010071 Amino acid adenylation domain D172_001470 ce9cd1c57e7f26501c44a3cb24619cad 1292 Gene3D G3DSA:3.30.300.30 853 932 2.5E-8 T 14-10-2018 D172_001470 ce9cd1c57e7f26501c44a3cb24619cad 1292 Gene3D G3DSA:3.30.300.30 427 533 7.2E-11 T 14-10-2018 D172_001470 ce9cd1c57e7f26501c44a3cb24619cad 1292 SUPERFAMILY SSF53474 1008 1278 1.78E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_001470 ce9cd1c57e7f26501c44a3cb24619cad 1292 ProSitePatterns PS00455 Putative AMP-binding domain signature. 172 183 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_001470 ce9cd1c57e7f26501c44a3cb24619cad 1292 Pfam PF00975 Thioesterase domain 1031 1140 6.1E-24 T 14-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 D172_001470 ce9cd1c57e7f26501c44a3cb24619cad 1292 Gene3D G3DSA:1.10.1200.10 933 1018 3.2E-22 T 14-10-2018 IPR036736 ACP-like superfamily D172_001470 ce9cd1c57e7f26501c44a3cb24619cad 1292 Pfam PF00501 AMP-binding enzyme 35 433 7.2E-89 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_001470 ce9cd1c57e7f26501c44a3cb24619cad 1292 Gene3D G3DSA:3.40.50.1820 1020 1282 7.9E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_001470 ce9cd1c57e7f26501c44a3cb24619cad 1292 Gene3D G3DSA:3.40.50.12780 19 426 1.4E-117 T 14-10-2018 D172_001470 ce9cd1c57e7f26501c44a3cb24619cad 1292 SUPERFAMILY SSF56801 24 955 4.45E-128 T 14-10-2018 D172_001470 ce9cd1c57e7f26501c44a3cb24619cad 1292 SUPERFAMILY SSF47336 936 1009 1.09E-18 T 14-10-2018 IPR036736 ACP-like superfamily D172_001470 ce9cd1c57e7f26501c44a3cb24619cad 1292 Gene3D G3DSA:3.40.109.10 542 733 3.0E-13 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 D172_004370 a3f22f8125b3c6bef79a860f595cfee4 554 SUPERFAMILY SSF49265 330 421 4.07E-7 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 D172_004370 a3f22f8125b3c6bef79a860f595cfee4 554 Gene3D G3DSA:3.90.1580.10 17 310 1.5E-60 T 14-10-2018 D172_004370 a3f22f8125b3c6bef79a860f595cfee4 554 Gene3D G3DSA:2.60.120.260 427 554 1.9E-17 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_004370 a3f22f8125b3c6bef79a860f595cfee4 554 Pfam PF03422 Carbohydrate binding module (family 6) 431 552 1.7E-7 T 14-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 D172_004370 a3f22f8125b3c6bef79a860f595cfee4 554 Gene3D G3DSA:2.60.40.10 332 426 8.7E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_004370 a3f22f8125b3c6bef79a860f595cfee4 554 SUPERFAMILY SSF56436 31 299 7.3E-55 T 14-10-2018 IPR016187 C-type lectin fold D172_004370 a3f22f8125b3c6bef79a860f595cfee4 554 Pfam PF03781 Sulfatase-modifying factor enzyme 1 31 296 7.7E-50 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 D172_004370 a3f22f8125b3c6bef79a860f595cfee4 554 SUPERFAMILY SSF49785 423 551 2.66E-20 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_013200 dfdf8a84b528827eb5e06d8532f5136e 526 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 526 337.162 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 D172_013200 dfdf8a84b528827eb5e06d8532f5136e 526 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 513 1.6E-260 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 D172_013200 dfdf8a84b528827eb5e06d8532f5136e 526 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 513 2.3E-251 T 14-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 D172_009600 63a08f14230b9fca7dee72c156f0b5bb 449 PIRSF PIRSF006809 3 449 3.0E-142 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 D172_009600 63a08f14230b9fca7dee72c156f0b5bb 449 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 110 386 1.9E-94 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 D172_009600 63a08f14230b9fca7dee72c156f0b5bb 449 Hamap MF_00900 GTPase HflX [hflX]. 31 419 41.518 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 D172_009600 63a08f14230b9fca7dee72c156f0b5bb 449 Pfam PF13167 GTP-binding GTPase N-terminal 29 147 2.2E-21 T 14-10-2018 IPR025121 GTPase HflX, N-terminal D172_009600 63a08f14230b9fca7dee72c156f0b5bb 449 SUPERFAMILY SSF52540 229 402 9.99E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_009600 63a08f14230b9fca7dee72c156f0b5bb 449 Gene3D G3DSA:3.40.50.11060 23 176 1.6E-34 T 14-10-2018 D172_009600 63a08f14230b9fca7dee72c156f0b5bb 449 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 231 251 1.4E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_009600 63a08f14230b9fca7dee72c156f0b5bb 449 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 298 316 1.4E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_009600 63a08f14230b9fca7dee72c156f0b5bb 449 Gene3D G3DSA:3.40.50.300 230 398 9.3E-35 T 14-10-2018 D172_009600 63a08f14230b9fca7dee72c156f0b5bb 449 Pfam PF01926 50S ribosome-binding GTPase 231 349 4.3E-16 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_009600 63a08f14230b9fca7dee72c156f0b5bb 449 Pfam PF16360 GTP-binding GTPase Middle Region 150 225 7.9E-19 T 14-10-2018 IPR032305 GTP-binding protein, middle domain D172_015215 d26ec4b7d7f01fe091972115d13a6188 137 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 70 7.9E-20 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D172_015215 d26ec4b7d7f01fe091972115d13a6188 137 SUPERFAMILY SSF52374 1 134 1.04E-26 T 14-10-2018 D172_015215 d26ec4b7d7f01fe091972115d13a6188 137 Gene3D G3DSA:3.40.50.620 2 135 7.9E-37 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_015215 d26ec4b7d7f01fe091972115d13a6188 137 Pfam PF01467 Cytidylyltransferase-like 6 131 2.4E-18 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D172_018780 d44a89db2f137b774362b0e87220067c 175 Gene3D G3DSA:3.40.50.2300 2 115 1.1E-27 T 14-10-2018 D172_018780 d44a89db2f137b774362b0e87220067c 175 Gene3D G3DSA:1.10.10.60 127 175 1.0E-21 T 14-10-2018 D172_018780 d44a89db2f137b774362b0e87220067c 175 Pfam PF00072 Response regulator receiver domain 4 113 1.2E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_018780 d44a89db2f137b774362b0e87220067c 175 SMART SM00448 1 112 3.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_018780 d44a89db2f137b774362b0e87220067c 175 SUPERFAMILY SSF46689 120 170 1.25E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_018780 d44a89db2f137b774362b0e87220067c 175 Pfam PF02954 Bacterial regulatory protein, Fis family 132 170 7.1E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_018780 d44a89db2f137b774362b0e87220067c 175 SUPERFAMILY SSF52172 1 115 1.12E-30 T 14-10-2018 IPR011006 CheY-like superfamily D172_018780 d44a89db2f137b774362b0e87220067c 175 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 137 154 5.3E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_018780 d44a89db2f137b774362b0e87220067c 175 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 154 174 5.3E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_000270 e7967cd45e8d614f06c0b07909068075 140 SUPERFAMILY SSF51344 4 87 1.24E-23 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000270 e7967cd45e8d614f06c0b07909068075 140 Gene3D G3DSA:2.60.15.10 4 91 2.0E-29 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000270 e7967cd45e8d614f06c0b07909068075 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 135 5.7E-9 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain D172_000270 e7967cd45e8d614f06c0b07909068075 140 SUPERFAMILY SSF46604 89 138 1.6E-10 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000270 e7967cd45e8d614f06c0b07909068075 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 135 1.9E-42 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000270 e7967cd45e8d614f06c0b07909068075 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 133 20.335 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000270 e7967cd45e8d614f06c0b07909068075 140 Gene3D G3DSA:1.20.5.440 92 135 2.7E-11 T 14-10-2018 D172_000270 e7967cd45e8d614f06c0b07909068075 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 7 85 4.8E-28 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000270 e7967cd45e8d614f06c0b07909068075 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 1.0E-35 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_002165 8223459f21b7a269b8803a181bfe232f 616 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 405 418 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_002165 8223459f21b7a269b8803a181bfe232f 616 Pfam PF04542 Sigma-70 region 2 381 450 1.7E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D172_002165 8223459f21b7a269b8803a181bfe232f 616 Pfam PF04539 Sigma-70 region 3 460 536 4.8E-30 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 D172_002165 8223459f21b7a269b8803a181bfe232f 616 Gene3D G3DSA:1.10.601.10 111 450 1.1E-132 T 14-10-2018 D172_002165 8223459f21b7a269b8803a181bfe232f 616 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 377 613 6.2E-121 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 D172_002165 8223459f21b7a269b8803a181bfe232f 616 SUPERFAMILY SSF88946 113 448 5.1E-97 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D172_002165 8223459f21b7a269b8803a181bfe232f 616 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 574 600 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_002165 8223459f21b7a269b8803a181bfe232f 616 PRINTS PR00046 Major sigma-70 factor signature 429 437 6.5E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_002165 8223459f21b7a269b8803a181bfe232f 616 PRINTS PR00046 Major sigma-70 factor signature 589 600 6.5E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_002165 8223459f21b7a269b8803a181bfe232f 616 PRINTS PR00046 Major sigma-70 factor signature 405 418 6.5E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_002165 8223459f21b7a269b8803a181bfe232f 616 PRINTS PR00046 Major sigma-70 factor signature 553 565 6.5E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_002165 8223459f21b7a269b8803a181bfe232f 616 PRINTS PR00046 Major sigma-70 factor signature 574 589 6.5E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_002165 8223459f21b7a269b8803a181bfe232f 616 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 3.7E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_002165 8223459f21b7a269b8803a181bfe232f 616 SUPERFAMILY SSF88659 454 527 1.8E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_002165 8223459f21b7a269b8803a181bfe232f 616 Gene3D G3DSA:1.10.10.10 531 615 3.1E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_002165 8223459f21b7a269b8803a181bfe232f 616 Pfam PF04546 Sigma-70, non-essential region 137 350 5.1E-63 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_002165 8223459f21b7a269b8803a181bfe232f 616 Gene3D G3DSA:1.10.10.10 454 530 2.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_002165 8223459f21b7a269b8803a181bfe232f 616 SUPERFAMILY SSF88659 511 613 1.01E-25 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_002165 8223459f21b7a269b8803a181bfe232f 616 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 377 602 3.1E-38 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D172_002165 8223459f21b7a269b8803a181bfe232f 616 Gene3D G3DSA:1.10.220.120 1 64 7.8E-28 T 14-10-2018 D172_002165 8223459f21b7a269b8803a181bfe232f 616 Pfam PF03979 Sigma-70 factor, region 1.1 6 80 1.3E-28 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 D172_002165 8223459f21b7a269b8803a181bfe232f 616 Pfam PF04545 Sigma-70, region 4 549 602 1.0E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 D172_002165 8223459f21b7a269b8803a181bfe232f 616 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 614 45.469 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 D172_006650 15e02be5e4aba817af63894e81e037f5 234 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 43.91 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 D172_006650 15e02be5e4aba817af63894e81e037f5 234 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 3.5E-90 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 D172_006650 15e02be5e4aba817af63894e81e037f5 234 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 206 4.2E-43 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel D172_004550 752d7f25e51b8d9530320c5f0df69fb6 104 SUPERFAMILY SSF51182 10 102 4.0E-33 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily D172_004550 752d7f25e51b8d9530320c5f0df69fb6 104 Pfam PF06865 Protein of unknown function (DUF1255) 11 102 1.2E-36 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 D172_004550 752d7f25e51b8d9530320c5f0df69fb6 104 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 10 103 27.731 T 14-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 D172_004550 752d7f25e51b8d9530320c5f0df69fb6 104 Gene3D G3DSA:2.60.120.10 2 102 9.2E-42 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_011190 c32afc869b0a2c63314f3669e0ebe43f 452 Gene3D G3DSA:3.60.120.10 5 452 4.5E-165 T 14-10-2018 IPR005801 ADC synthase GO:0009058 D172_011190 c32afc869b0a2c63314f3669e0ebe43f 452 Pfam PF04715 Anthranilate synthase component I, N terminal region 17 147 3.8E-25 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_011190 c32afc869b0a2c63314f3669e0ebe43f 452 PRINTS PR00095 Anthranilate synthase component I signature 304 317 4.0E-17 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_011190 c32afc869b0a2c63314f3669e0ebe43f 452 PRINTS PR00095 Anthranilate synthase component I signature 399 413 4.0E-17 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_011190 c32afc869b0a2c63314f3669e0ebe43f 452 PRINTS PR00095 Anthranilate synthase component I signature 290 303 4.0E-17 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_011190 c32afc869b0a2c63314f3669e0ebe43f 452 PRINTS PR00095 Anthranilate synthase component I signature 384 398 4.0E-17 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_011190 c32afc869b0a2c63314f3669e0ebe43f 452 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 100 445 8.6E-124 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 D172_011190 c32afc869b0a2c63314f3669e0ebe43f 452 SUPERFAMILY SSF56322 21 451 1.96E-138 T 14-10-2018 IPR005801 ADC synthase GO:0009058 D172_011190 c32afc869b0a2c63314f3669e0ebe43f 452 Pfam PF00425 chorismate binding enzyme 189 442 1.9E-94 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal D172_003610 5b0550b21b3e391f9d4cecd134267a10 323 Gene3D G3DSA:3.20.20.100 3 323 1.5E-90 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily D172_003610 5b0550b21b3e391f9d4cecd134267a10 323 Pfam PF00248 Aldo/keto reductase family 15 311 7.2E-57 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain D172_003610 5b0550b21b3e391f9d4cecd134267a10 323 SUPERFAMILY SSF51430 11 314 2.88E-70 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily D172_018060 93e057ca4cd0bcee89dc4534115ded65 343 Gene3D G3DSA:3.40.50.2300 61 324 3.8E-46 T 14-10-2018 D172_018060 93e057ca4cd0bcee89dc4534115ded65 343 Pfam PF13377 Periplasmic binding protein-like domain 204 326 7.7E-22 T 14-10-2018 D172_018060 93e057ca4cd0bcee89dc4534115ded65 343 Gene3D G3DSA:3.40.50.2300 162 309 3.8E-46 T 14-10-2018 D172_018060 93e057ca4cd0bcee89dc4534115ded65 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 51 1.3E-9 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_018060 93e057ca4cd0bcee89dc4534115ded65 343 SUPERFAMILY SSF53822 67 330 1.4E-38 T 14-10-2018 IPR028082 Periplasmic binding protein-like I D172_018060 93e057ca4cd0bcee89dc4534115ded65 343 Gene3D G3DSA:1.10.260.40 2 60 4.9E-17 T 14-10-2018 D172_018060 93e057ca4cd0bcee89dc4534115ded65 343 SMART SM00354 6 77 3.3E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_018060 93e057ca4cd0bcee89dc4534115ded65 343 SUPERFAMILY SSF47413 6 63 6.75E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D172_013180 3ce29a98b9d3639d1e7549c4aec2f370 863 Gene3D G3DSA:2.170.130.10 32 174 2.1E-37 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_013180 3ce29a98b9d3639d1e7549c4aec2f370 863 SUPERFAMILY SSF56935 37 863 5.19E-110 T 14-10-2018 D172_013180 3ce29a98b9d3639d1e7549c4aec2f370 863 Pfam PF00593 TonB dependent receptor 342 861 8.8E-57 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_013180 3ce29a98b9d3639d1e7549c4aec2f370 863 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 170 5.0E-24 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_013180 3ce29a98b9d3639d1e7549c4aec2f370 863 Gene3D G3DSA:2.40.170.20 303 863 1.3E-67 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_015770 254766c3931412497b7326beb6f0cb08 792 Gene3D G3DSA:3.40.50.12330 653 718 7.6E-22 T 14-10-2018 D172_015770 254766c3931412497b7326beb6f0cb08 792 SMART SM00448 662 777 8.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_015770 254766c3931412497b7326beb6f0cb08 792 Gene3D G3DSA:1.10.287.130 366 463 2.2E-27 T 14-10-2018 D172_015770 254766c3931412497b7326beb6f0cb08 792 SUPERFAMILY SSF47384 386 466 5.49E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_015770 254766c3931412497b7326beb6f0cb08 792 Pfam PF00512 His Kinase A (phospho-acceptor) domain 401 465 3.5E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_015770 254766c3931412497b7326beb6f0cb08 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 569 3.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_015770 254766c3931412497b7326beb6f0cb08 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 627 3.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_015770 254766c3931412497b7326beb6f0cb08 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 583 3.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_015770 254766c3931412497b7326beb6f0cb08 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 590 608 3.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_015770 254766c3931412497b7326beb6f0cb08 792 Pfam PF00072 Response regulator receiver domain 664 777 4.5E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_015770 254766c3931412497b7326beb6f0cb08 792 SMART SM00388 400 465 5.0E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_015770 254766c3931412497b7326beb6f0cb08 792 SMART SM00387 512 630 7.4E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_015770 254766c3931412497b7326beb6f0cb08 792 Gene3D G3DSA:3.30.565.10 464 635 2.1E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_015770 254766c3931412497b7326beb6f0cb08 792 SUPERFAMILY SSF52172 661 782 1.57E-33 T 14-10-2018 IPR011006 CheY-like superfamily D172_015770 254766c3931412497b7326beb6f0cb08 792 Gene3D G3DSA:3.40.50.2300 719 791 1.1E-13 T 14-10-2018 D172_015770 254766c3931412497b7326beb6f0cb08 792 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 512 627 5.6E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_015770 254766c3931412497b7326beb6f0cb08 792 SUPERFAMILY SSF55874 454 628 5.63E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 Gene3D G3DSA:1.20.120.160 811 918 9.8E-28 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 SMART SM00448 671 784 8.1E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 Pfam PF01627 Hpt domain 832 913 1.0E-9 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 Gene3D G3DSA:1.10.287.130 233 352 4.5E-27 T 14-10-2018 D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 512 1.0E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 Gene3D G3DSA:3.40.50.2300 656 800 3.8E-37 T 14-10-2018 D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 Gene3D G3DSA:3.40.50.2300 529 652 3.0E-7 T 14-10-2018 D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 SUPERFAMILY SSF47384 275 354 1.96E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 Pfam PF00072 Response regulator receiver domain 673 784 3.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 SUPERFAMILY SSF55874 343 511 1.31E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 173 3.2E-41 T 14-10-2018 IPR019247 Histidine kinase BarA, N-terminal D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 SMART SM00073 821 914 9.1E-5 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 354 7.4E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 Gene3D G3DSA:3.30.565.10 353 517 5.3E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 SMART SM00387 401 517 1.2E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 495 1.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 456 1.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 514 1.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 470 1.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 SUPERFAMILY SSF52172 670 788 1.08E-33 T 14-10-2018 IPR011006 CheY-like superfamily D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 SMART SM00388 289 354 6.5E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 SUPERFAMILY SSF52172 533 650 5.83E-12 T 14-10-2018 IPR011006 CheY-like superfamily D172_013715 4c29d67c8351fbaa258ca00df0472fcc 928 SUPERFAMILY SSF47226 767 913 1.44E-20 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 695 30.307 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 693 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 Pfam PF00013 KH domain 558 615 1.1E-10 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 SUPERFAMILY SSF50249 610 694 7.88E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 Pfam PF00575 S1 RNA binding domain 621 692 6.6E-22 T 14-10-2018 IPR003029 S1 domain GO:0003676 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 6.5E-22 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 Pfam PF01138 3' exoribonuclease family, domain 1 326 458 3.5E-21 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 SUPERFAMILY SSF55666 452 550 4.07E-27 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 322 4.5E-21 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 SUPERFAMILY SSF54211 3 143 1.37E-51 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 SUPERFAMILY SSF54211 295 490 9.62E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 PIRSF PIRSF005499 1 707 6.2E-299 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 SUPERFAMILY SSF46915 238 322 2.3E-17 T 14-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 Gene3D G3DSA:3.30.230.70 1 228 3.9E-83 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 Gene3D G3DSA:3.30.1370.10 552 623 6.8E-20 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 Gene3D G3DSA:2.40.50.140 624 695 1.3E-30 T 14-10-2018 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 SUPERFAMILY SSF55666 144 234 1.68E-30 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 SUPERFAMILY SSF54791 554 631 5.06E-17 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 Pfam PF03725 3' exoribonuclease family, domain 2 146 208 4.8E-13 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 Pfam PF03725 3' exoribonuclease family, domain 2 462 530 2.5E-4 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 Gene3D G3DSA:3.30.230.70 232 551 1.3E-113 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 SMART SM00322 554 619 1.5E-12 T 14-10-2018 IPR004087 K Homology domain GO:0003676 D172_012395 f55291ae7790dce3e360f6fcf6e85e66 708 SMART SM00316 622 692 4.4E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 D172_002300 dbec7884729d8819bd70b461c3add204 558 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 377 391 - T 14-10-2018 IPR001482 Type II/IV secretion system protein D172_002300 dbec7884729d8819bd70b461c3add204 558 Gene3D G3DSA:3.30.450.90 144 282 7.6E-51 T 14-10-2018 D172_002300 dbec7884729d8819bd70b461c3add204 558 Pfam PF00437 Type II/IV secretion system protein 182 449 2.8E-92 T 14-10-2018 IPR001482 Type II/IV secretion system protein D172_002300 dbec7884729d8819bd70b461c3add204 558 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 25 557 1.6E-244 T 14-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 D172_002300 dbec7884729d8819bd70b461c3add204 558 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 40 140 4.8E-13 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal D172_002300 dbec7884729d8819bd70b461c3add204 558 Gene3D G3DSA:3.40.50.300 284 558 5.5E-106 T 14-10-2018 D172_002300 dbec7884729d8819bd70b461c3add204 558 SUPERFAMILY SSF160246 5 136 3.4E-22 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily D172_002300 dbec7884729d8819bd70b461c3add204 558 Gene3D G3DSA:3.30.300.160 57 137 7.7E-6 T 14-10-2018 D172_002300 dbec7884729d8819bd70b461c3add204 558 SUPERFAMILY SSF52540 167 556 4.86E-98 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006505 ec35d1ca01ceb1987b95ebbb86b16c20 472 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 133 3.7E-18 T 14-10-2018 IPR000014 PAS domain D172_006505 ec35d1ca01ceb1987b95ebbb86b16c20 472 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 253 268 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D172_006505 ec35d1ca01ceb1987b95ebbb86b16c20 472 SMART SM00382 187 331 2.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_006505 ec35d1ca01ceb1987b95ebbb86b16c20 472 SUPERFAMILY SSF52540 167 402 8.95E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006505 ec35d1ca01ceb1987b95ebbb86b16c20 472 Gene3D G3DSA:1.10.10.60 410 471 9.9E-9 T 14-10-2018 D172_006505 ec35d1ca01ceb1987b95ebbb86b16c20 472 Pfam PF00989 PAS fold 9 123 6.2E-13 T 14-10-2018 IPR013767 PAS fold GO:0006355 D172_006505 ec35d1ca01ceb1987b95ebbb86b16c20 472 SMART SM00091 7 73 1.2E-5 T 14-10-2018 IPR000014 PAS domain D172_006505 ec35d1ca01ceb1987b95ebbb86b16c20 472 SUPERFAMILY SSF46689 378 468 4.93E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_006505 ec35d1ca01ceb1987b95ebbb86b16c20 472 Gene3D G3DSA:3.30.450.20 10 143 6.4E-25 T 14-10-2018 D172_006505 ec35d1ca01ceb1987b95ebbb86b16c20 472 Gene3D G3DSA:3.40.50.300 157 338 3.3E-64 T 14-10-2018 D172_006505 ec35d1ca01ceb1987b95ebbb86b16c20 472 Pfam PF00158 Sigma-54 interaction domain 167 334 2.5E-71 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D172_006505 ec35d1ca01ceb1987b95ebbb86b16c20 472 Gene3D G3DSA:1.10.8.60 340 409 2.9E-22 T 14-10-2018 D172_006505 ec35d1ca01ceb1987b95ebbb86b16c20 472 SUPERFAMILY SSF55785 18 135 9.99E-21 T 14-10-2018 IPR035965 PAS domain superfamily D172_006505 ec35d1ca01ceb1987b95ebbb86b16c20 472 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 380 389 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site D172_006870 3cdcb232c44a977cd2e9de7c7ff75e0d 224 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 10 223 2.4E-84 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO D172_006870 3cdcb232c44a977cd2e9de7c7ff75e0d 224 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 10 222 2.2E-84 T 14-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO D172_006870 3cdcb232c44a977cd2e9de7c7ff75e0d 224 SUPERFAMILY SSF46626 20 220 6.14E-28 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_006870 3cdcb232c44a977cd2e9de7c7ff75e0d 224 Gene3D G3DSA:1.10.760.10 47 224 3.4E-62 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_017290 3a7f92d4bda8e217f6c88ff272dc30c1 288 SUPERFAMILY SSF55073 134 283 5.57E-46 T 14-10-2018 IPR029787 Nucleotide cyclase D172_017290 3a7f92d4bda8e217f6c88ff272dc30c1 288 Pfam PF00989 PAS fold 8 97 9.4E-13 T 14-10-2018 IPR013767 PAS fold GO:0006355 D172_017290 3a7f92d4bda8e217f6c88ff272dc30c1 288 Gene3D G3DSA:3.30.450.20 8 126 8.3E-23 T 14-10-2018 D172_017290 3a7f92d4bda8e217f6c88ff272dc30c1 288 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 125 6.9E-24 T 14-10-2018 IPR000014 PAS domain D172_017290 3a7f92d4bda8e217f6c88ff272dc30c1 288 SUPERFAMILY SSF55785 18 125 5.24E-24 T 14-10-2018 IPR035965 PAS domain superfamily D172_017290 3a7f92d4bda8e217f6c88ff272dc30c1 288 SMART SM00267 118 288 3.8E-56 T 14-10-2018 IPR000160 GGDEF domain D172_017290 3a7f92d4bda8e217f6c88ff272dc30c1 288 Gene3D G3DSA:3.30.70.270 127 288 8.8E-53 T 14-10-2018 D172_017290 3a7f92d4bda8e217f6c88ff272dc30c1 288 SMART SM00091 7 73 1.4E-8 T 14-10-2018 IPR000014 PAS domain D172_017290 3a7f92d4bda8e217f6c88ff272dc30c1 288 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 127 283 1.1E-42 T 14-10-2018 IPR000160 GGDEF domain D172_017290 3a7f92d4bda8e217f6c88ff272dc30c1 288 Pfam PF00990 Diguanylate cyclase, GGDEF domain 130 281 1.2E-47 T 14-10-2018 IPR000160 GGDEF domain D172_016470 3a0512d743c7fa5c97f3e5d1471b3895 193 Gene3D G3DSA:3.10.580.10 42 169 8.4E-17 T 14-10-2018 D172_016470 3a0512d743c7fa5c97f3e5d1471b3895 193 Pfam PF00571 CBS domain 45 88 2.1E-5 T 14-10-2018 IPR000644 CBS domain D172_016470 3a0512d743c7fa5c97f3e5d1471b3895 193 Pfam PF00571 CBS domain 132 170 0.0051 T 14-10-2018 IPR000644 CBS domain D172_016470 3a0512d743c7fa5c97f3e5d1471b3895 193 SUPERFAMILY SSF54631 37 169 7.28E-16 T 14-10-2018 D172_019205 b6f88e582f5297f1f8c31e534752deac 592 Gene3D G3DSA:2.60.40.1180 520 589 2.9E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta D172_019205 b6f88e582f5297f1f8c31e534752deac 592 Gene3D G3DSA:3.90.400.10 155 228 4.6E-149 T 14-10-2018 D172_019205 b6f88e582f5297f1f8c31e534752deac 592 SUPERFAMILY SSF51445 56 551 3.17E-90 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_019205 b6f88e582f5297f1f8c31e534752deac 592 Pfam PF00128 Alpha amylase, catalytic domain 100 358 4.3E-20 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D172_019205 b6f88e582f5297f1f8c31e534752deac 592 Gene3D G3DSA:3.20.20.80 63 477 4.6E-149 T 14-10-2018 D172_019205 b6f88e582f5297f1f8c31e534752deac 592 PIRSF PIRSF003059 9 590 4.0E-165 T 14-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related D172_019205 b6f88e582f5297f1f8c31e534752deac 592 SMART SM00642 60 501 1.7E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D172_012040 5bcd8acb4da66643de7ee9b4ffe98c44 352 Gene3D G3DSA:3.40.50.300 116 322 1.2E-74 T 14-10-2018 D172_012040 5bcd8acb4da66643de7ee9b4ffe98c44 352 SUPERFAMILY SSF52540 118 294 7.78E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_012040 5bcd8acb4da66643de7ee9b4ffe98c44 352 Pfam PF02562 PhoH-like protein 119 322 6.1E-95 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 Gene3D G3DSA:3.30.565.10 633 801 1.5E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 Gene3D G3DSA:3.40.50.12330 963 1029 2.4E-19 T 14-10-2018 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 SMART SM00388 569 634 7.7E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 Gene3D G3DSA:1.10.287.130 545 632 7.3E-25 T 14-10-2018 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 Pfam PF13426 PAS domain 455 548 1.1E-19 T 14-10-2018 IPR000014 PAS domain D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 SUPERFAMILY SSF55874 623 793 4.45E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 Pfam PF00072 Response regulator receiver domain 822 930 1.4E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 Pfam PF00072 Response regulator receiver domain 970 1088 1.8E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 Gene3D G3DSA:3.40.50.2300 813 955 5.7E-15 T 14-10-2018 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 Pfam PF00512 His Kinase A (phospho-acceptor) domain 569 634 2.4E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 SMART SM00086 507 549 1.4E-7 T 14-10-2018 IPR001610 PAC motif D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 SMART SM00086 375 417 1.1E-4 T 14-10-2018 IPR001610 PAC motif D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 Gene3D G3DSA:3.30.450.20 425 544 1.3E-36 T 14-10-2018 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 429 553 1.9E-16 T 14-10-2018 IPR000014 PAS domain D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 296 424 5.9E-15 T 14-10-2018 IPR000014 PAS domain D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 SMART SM00387 681 799 5.3E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 SUPERFAMILY SSF52172 812 936 2.13E-14 T 14-10-2018 IPR011006 CheY-like superfamily D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 681 795 1.6E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 SMART SM00448 813 932 0.0032 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 SMART SM00448 968 1089 3.7E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 PRINTS PR00344 Bacterial sensor protein C-terminal signature 740 750 6.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 PRINTS PR00344 Bacterial sensor protein C-terminal signature 722 736 6.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 PRINTS PR00344 Bacterial sensor protein C-terminal signature 757 775 6.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 PRINTS PR00344 Bacterial sensor protein C-terminal signature 781 794 6.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 Gene3D G3DSA:3.30.450.20 295 369 1.1E-15 T 14-10-2018 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 Pfam PF08447 PAS fold 321 410 5.6E-16 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 SUPERFAMILY SSF47384 555 635 6.87E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 SUPERFAMILY SSF52172 967 1094 1.71E-33 T 14-10-2018 IPR011006 CheY-like superfamily D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 SUPERFAMILY SSF55785 439 549 1.12E-22 T 14-10-2018 IPR035965 PAS domain superfamily D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 SMART SM00091 298 369 4.4E-4 T 14-10-2018 IPR000014 PAS domain D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 SMART SM00091 432 501 0.2 T 14-10-2018 IPR000014 PAS domain D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 Gene3D G3DSA:3.40.50.2300 1030 1098 3.1E-18 T 14-10-2018 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 Gene3D G3DSA:2.10.70.100 371 419 9.7E-11 T 14-10-2018 D172_005225 b6de9755b7f33df7a32d13582e43748a 1098 SUPERFAMILY SSF55785 304 419 2.27E-20 T 14-10-2018 IPR035965 PAS domain superfamily D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 Pfam PF10410 DnaB-helicase binding domain of primase 375 424 1.1E-6 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 Pfam PF01807 CHC2 zinc finger 6 101 3.3E-41 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 SUPERFAMILY SSF56731 118 426 1.96E-100 T 14-10-2018 D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 SMART SM00493 262 333 9.1E-19 T 14-10-2018 IPR006171 TOPRIM domain D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 SUPERFAMILY SSF117023 447 578 3.4E-38 T 14-10-2018 D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 SUPERFAMILY SSF57783 5 100 9.52E-37 T 14-10-2018 D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 Hamap MF_00974 DNA primase [dnaG]. 4 579 29.11 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 TIGRFAM TIGR01391 dnaG: DNA primase 5 420 4.5E-145 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 Gene3D G3DSA:1.20.50.20 371 428 1.2E-9 T 14-10-2018 D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 255 2.1E-41 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 PIRSF PIRSF002811 2 575 5.6E-145 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 Pfam PF13155 Toprim-like 266 351 9.1E-13 T 14-10-2018 D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 Gene3D G3DSA:1.10.860.10 435 580 1.5E-37 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 SMART SM00766 450 575 2.9E-34 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 Gene3D G3DSA:3.40.1360.10 244 370 4.0E-42 T 14-10-2018 D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 Gene3D G3DSA:3.90.580.10 1 101 9.7E-38 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 SMART SM00400 36 90 6.7E-38 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 Gene3D G3DSA:3.90.980.10 117 243 1.2E-41 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily D172_002170 09d241fbd6c6f0a3581a140ea9c33842 583 Pfam PF08278 DNA primase DnaG DnaB-binding 451 572 7.4E-27 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 D172_016205 b77976f6df4a7c97ea82702aac690f8d 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.1 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016205 b77976f6df4a7c97ea82702aac690f8d 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016205 b77976f6df4a7c97ea82702aac690f8d 118 Gene3D G3DSA:1.10.8.50 1 71 7.7E-24 T 14-10-2018 D172_016205 b77976f6df4a7c97ea82702aac690f8d 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.0E-50 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_016205 b77976f6df4a7c97ea82702aac690f8d 118 PIRSF PIRSF002134 1 118 1.9E-38 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016205 b77976f6df4a7c97ea82702aac690f8d 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 6.0E-29 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016205 b77976f6df4a7c97ea82702aac690f8d 118 Gene3D G3DSA:4.10.910.10 72 118 1.5E-25 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016205 b77976f6df4a7c97ea82702aac690f8d 118 SUPERFAMILY SSF46946 2 114 3.09E-43 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 D172_002985 beaa29d094cc816b6d6b8f413f166587 573 Pfam PF01368 DHH family 72 210 1.4E-7 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 D172_002985 beaa29d094cc816b6d6b8f413f166587 573 SUPERFAMILY SSF64182 46 457 5.1E-115 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily D172_002985 beaa29d094cc816b6d6b8f413f166587 573 Pfam PF02272 DHHA1 domain 318 449 3.2E-27 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 D172_002985 beaa29d094cc816b6d6b8f413f166587 573 Gene3D G3DSA:3.90.1640.30 46 322 1.8E-84 T 14-10-2018 D172_002985 beaa29d094cc816b6d6b8f413f166587 573 Gene3D G3DSA:3.10.310.30 325 453 1.0E-31 T 14-10-2018 D172_002985 beaa29d094cc816b6d6b8f413f166587 573 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 21 568 1.2E-158 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 Gene3D G3DSA:3.30.70.1430 56 813 3.8E-250 T 14-10-2018 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 Gene3D G3DSA:1.20.1640.10 512 1023 3.8E-250 T 14-10-2018 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 SUPERFAMILY SSF82693 56 147 2.09E-11 T 14-10-2018 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 Gene3D G3DSA:1.20.1640.10 26 511 3.8E-250 T 14-10-2018 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 Gene3D G3DSA:3.30.70.1430 569 668 3.8E-250 T 14-10-2018 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 Pfam PF00873 AcrB/AcrD/AcrF family 19 1026 3.0E-152 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 Gene3D G3DSA:3.30.2090.10 190 280 3.8E-250 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 SUPERFAMILY SSF82714 729 803 1.26E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 Gene3D G3DSA:3.30.70.1440 669 866 3.8E-250 T 14-10-2018 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 SUPERFAMILY SSF82866 309 497 6.93E-35 T 14-10-2018 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 Gene3D G3DSA:3.30.2090.10 718 805 3.8E-250 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 3.6E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 PRINTS PR00702 Acriflavin resistance protein family signature 54 72 3.6E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 3.6E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 PRINTS PR00702 Acriflavin resistance protein family signature 395 419 3.6E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 PRINTS PR00702 Acriflavin resistance protein family signature 26 50 3.6E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 PRINTS PR00702 Acriflavin resistance protein family signature 341 364 3.6E-25 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 SUPERFAMILY SSF82714 195 275 3.4E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 SUPERFAMILY SSF82693 160 335 1.26E-7 T 14-10-2018 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 Gene3D G3DSA:3.30.70.1320 149 337 3.8E-250 T 14-10-2018 D172_000580 48ccff19ed9efb7eaea94156970db67c 1051 SUPERFAMILY SSF82866 803 1027 3.27E-49 T 14-10-2018 D172_017570 81560d62a0536b49902ab319fe92ddb7 508 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 68 500 1.0E-156 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath D172_017570 81560d62a0536b49902ab319fe92ddb7 508 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 64 500 1.6E-133 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath D172_012795 9296beafc9234d57a4e73e5d5fc6197b 427 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 6 418 53.197 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 D172_012795 9296beafc9234d57a4e73e5d5fc6197b 427 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 320 397 5.0E-15 T 14-10-2018 IPR019489 Clp ATPase, C-terminal D172_012795 9296beafc9234d57a4e73e5d5fc6197b 427 Pfam PF06689 ClpX C4-type zinc finger 15 52 5.8E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 D172_012795 9296beafc9234d57a4e73e5d5fc6197b 427 SUPERFAMILY SSF52540 64 406 1.26E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_012795 9296beafc9234d57a4e73e5d5fc6197b 427 SMART SM00994 14 53 1.6E-23 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 D172_012795 9296beafc9234d57a4e73e5d5fc6197b 427 SMART SM01086 320 415 6.0E-33 T 14-10-2018 IPR019489 Clp ATPase, C-terminal D172_012795 9296beafc9234d57a4e73e5d5fc6197b 427 Gene3D G3DSA:3.30.50.30 4 54 9.4E-26 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily D172_012795 9296beafc9234d57a4e73e5d5fc6197b 427 Gene3D G3DSA:1.10.8.60 319 427 7.8E-40 T 14-10-2018 D172_012795 9296beafc9234d57a4e73e5d5fc6197b 427 Pfam PF07724 AAA domain (Cdc48 subfamily) 115 313 2.1E-49 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D172_012795 9296beafc9234d57a4e73e5d5fc6197b 427 SMART SM00382 114 420 1.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_012795 9296beafc9234d57a4e73e5d5fc6197b 427 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 11 415 5.5E-209 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 D172_012795 9296beafc9234d57a4e73e5d5fc6197b 427 SUPERFAMILY SSF57716 15 50 1.1E-11 T 14-10-2018 D172_012795 9296beafc9234d57a4e73e5d5fc6197b 427 Gene3D G3DSA:3.40.50.300 61 318 2.1E-109 T 14-10-2018 D172_000170 798df6ca0f5f9cd39a04539f0114e8a5 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 244 3.0E-32 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 D172_000170 798df6ca0f5f9cd39a04539f0114e8a5 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 3.3E-36 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 D172_000170 798df6ca0f5f9cd39a04539f0114e8a5 367 Gene3D G3DSA:3.10.150.10 1 123 2.8E-41 T 14-10-2018 D172_000170 798df6ca0f5f9cd39a04539f0114e8a5 367 Gene3D G3DSA:3.10.150.10 124 248 7.0E-33 T 14-10-2018 D172_000170 798df6ca0f5f9cd39a04539f0114e8a5 367 Gene3D G3DSA:3.10.150.10 249 367 3.3E-41 T 14-10-2018 D172_000170 798df6ca0f5f9cd39a04539f0114e8a5 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 366 1.3E-40 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 D172_000170 798df6ca0f5f9cd39a04539f0114e8a5 367 SUPERFAMILY SSF55979 125 245 1.52E-24 T 14-10-2018 D172_000170 798df6ca0f5f9cd39a04539f0114e8a5 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 367 3.1E-109 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 D172_000170 798df6ca0f5f9cd39a04539f0114e8a5 367 SUPERFAMILY SSF55979 1 121 5.54E-28 T 14-10-2018 D172_000170 798df6ca0f5f9cd39a04539f0114e8a5 367 SUPERFAMILY SSF55979 246 367 6.28E-40 T 14-10-2018 D172_000170 798df6ca0f5f9cd39a04539f0114e8a5 367 PIRSF PIRSF000804 1 367 3.1E-118 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 D172_000170 798df6ca0f5f9cd39a04539f0114e8a5 367 SMART SM00480 17 363 2.3E-144 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 D172_008565 3cdb24ea6a801646e5d147aeb30bc833 227 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 176 4.6E-48 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 D172_008565 3cdb24ea6a801646e5d147aeb30bc833 227 Gene3D G3DSA:3.40.50.300 1 225 2.0E-59 T 14-10-2018 D172_008565 3cdb24ea6a801646e5d147aeb30bc833 227 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 208 28.441 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 D172_008565 3cdb24ea6a801646e5d147aeb30bc833 227 Pfam PF13500 AAA domain 3 209 8.3E-33 T 14-10-2018 D172_008565 3cdb24ea6a801646e5d147aeb30bc833 227 SUPERFAMILY SSF52540 1 210 4.91E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_008565 3cdb24ea6a801646e5d147aeb30bc833 227 PIRSF PIRSF006755 1 227 7.5E-69 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 D172_009030 2225e557249897fcbb2194b686d5874b 391 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 133 145 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 D172_009030 2225e557249897fcbb2194b686d5874b 391 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 127 1.7E-36 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 D172_009030 2225e557249897fcbb2194b686d5874b 391 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 345 364 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 D172_009030 2225e557249897fcbb2194b686d5874b 391 PIRSF PIRSF016578 15 117 0.056 T 14-10-2018 D172_009030 2225e557249897fcbb2194b686d5874b 391 PIRSF PIRSF016578 135 391 3.8E-10 T 14-10-2018 D172_009030 2225e557249897fcbb2194b686d5874b 391 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 131 226 6.0E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 D172_009030 2225e557249897fcbb2194b686d5874b 391 Gene3D G3DSA:1.10.540.10 4 129 2.7E-47 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 D172_009030 2225e557249897fcbb2194b686d5874b 391 SUPERFAMILY SSF47203 237 388 1.77E-47 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 D172_009030 2225e557249897fcbb2194b686d5874b 391 Gene3D G3DSA:1.20.140.10 243 387 9.4E-49 T 14-10-2018 D172_009030 2225e557249897fcbb2194b686d5874b 391 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 386 4.6E-45 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 D172_009030 2225e557249897fcbb2194b686d5874b 391 SUPERFAMILY SSF56645 9 251 2.49E-85 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 D172_009030 2225e557249897fcbb2194b686d5874b 391 Gene3D G3DSA:2.40.110.10 130 242 1.3E-45 T 14-10-2018 D172_010820 6e50a48af94a6f5b6a40ba249f03b518 341 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 341 5.4E-151 T 14-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 D172_010820 6e50a48af94a6f5b6a40ba249f03b518 341 SMART SM00829 13 338 1.5E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D172_010820 6e50a48af94a6f5b6a40ba249f03b518 341 Pfam PF13602 Zinc-binding dehydrogenase 198 338 1.6E-17 T 14-10-2018 D172_010820 6e50a48af94a6f5b6a40ba249f03b518 341 Gene3D G3DSA:3.90.180.10 22 338 3.0E-97 T 14-10-2018 D172_010820 6e50a48af94a6f5b6a40ba249f03b518 341 SUPERFAMILY SSF50129 11 143 7.23E-30 T 14-10-2018 IPR011032 GroES-like superfamily D172_010820 6e50a48af94a6f5b6a40ba249f03b518 341 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 154 175 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 D172_010820 6e50a48af94a6f5b6a40ba249f03b518 341 SUPERFAMILY SSF51735 117 286 1.34E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_010820 6e50a48af94a6f5b6a40ba249f03b518 341 Gene3D G3DSA:3.40.50.720 128 277 3.0E-97 T 14-10-2018 D172_010820 6e50a48af94a6f5b6a40ba249f03b518 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 89 6.7E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D172_004490 a283c1b3b30e50bdd234ea3c0c7201ea 825 SUPERFAMILY SSF141371 488 546 2.75E-5 T 14-10-2018 D172_004490 a283c1b3b30e50bdd234ea3c0c7201ea 825 Gene3D G3DSA:2.40.10.220 142 251 2.1E-6 T 14-10-2018 D172_004490 a283c1b3b30e50bdd234ea3c0c7201ea 825 Pfam PF07238 PilZ domain 492 570 3.4E-7 T 14-10-2018 IPR009875 PilZ domain GO:0035438 D172_004490 a283c1b3b30e50bdd234ea3c0c7201ea 825 Pfam PF07238 PilZ domain 146 229 7.5E-7 T 14-10-2018 IPR009875 PilZ domain GO:0035438 D172_010155 a56f7c00d412d4eb3638cedde3f42bab 454 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 251 1.9E-90 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 D172_010155 a56f7c00d412d4eb3638cedde3f42bab 454 SUPERFAMILY SSF51366 257 452 2.51E-52 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D172_010155 a56f7c00d412d4eb3638cedde3f42bab 454 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 255 454 30.034 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 D172_010155 a56f7c00d412d4eb3638cedde3f42bab 454 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 D172_010155 a56f7c00d412d4eb3638cedde3f42bab 454 SUPERFAMILY SSF51366 1 251 2.83E-81 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D172_010155 a56f7c00d412d4eb3638cedde3f42bab 454 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 254 34.145 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 D172_010155 a56f7c00d412d4eb3638cedde3f42bab 454 Gene3D G3DSA:3.20.20.70 256 448 4.5E-174 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_010155 a56f7c00d412d4eb3638cedde3f42bab 454 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 257 448 1.6E-50 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 D172_010155 a56f7c00d412d4eb3638cedde3f42bab 454 Gene3D G3DSA:3.20.20.70 8 255 4.5E-174 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_004235 a409bfd16d059b4297f6d8cf127ad176 485 SMART SM00388 256 324 7.1E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_004235 a409bfd16d059b4297f6d8cf127ad176 485 SUPERFAMILY SSF47384 241 321 4.71E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_004235 a409bfd16d059b4297f6d8cf127ad176 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 7.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004235 a409bfd16d059b4297f6d8cf127ad176 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 477 7.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004235 a409bfd16d059b4297f6d8cf127ad176 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 7.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004235 a409bfd16d059b4297f6d8cf127ad176 485 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 7.9E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004235 a409bfd16d059b4297f6d8cf127ad176 485 SUPERFAMILY SSF55874 329 478 1.83E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_004235 a409bfd16d059b4297f6d8cf127ad176 485 Gene3D G3DSA:1.10.287.130 203 319 3.8E-18 T 14-10-2018 D172_004235 a409bfd16d059b4297f6d8cf127ad176 485 Gene3D G3DSA:3.30.565.10 328 482 1.4E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_004235 a409bfd16d059b4297f6d8cf127ad176 485 SMART SM00387 368 480 1.2E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_004235 a409bfd16d059b4297f6d8cf127ad176 485 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 479 5.4E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_004235 a409bfd16d059b4297f6d8cf127ad176 485 Pfam PF00512 His Kinase A (phospho-acceptor) domain 257 319 2.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_008670 586c7cf53c9d9e287ce489f58979da29 64 Pfam PF14255 Cysteine-rich CPXCG 9 58 9.0E-20 T 14-10-2018 IPR025990 Cysteine-rich CPXCG protein D172_008670 586c7cf53c9d9e287ce489f58979da29 64 PIRSF PIRSF037225 1 63 1.4E-19 T 14-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 D172_020335 8ea236745a22b1d907291a7ba14f642e 161 SUPERFAMILY SSF46785 10 150 2.73E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_020335 8ea236745a22b1d907291a7ba14f642e 161 Pfam PF12802 MarR family 37 97 3.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_020335 8ea236745a22b1d907291a7ba14f642e 161 Gene3D G3DSA:1.10.10.10 13 158 1.7E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_020335 8ea236745a22b1d907291a7ba14f642e 161 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 106 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site D172_020335 8ea236745a22b1d907291a7ba14f642e 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 143 8.8E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_020335 8ea236745a22b1d907291a7ba14f642e 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 8.8E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_020335 8ea236745a22b1d907291a7ba14f642e 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 8.8E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_020335 8ea236745a22b1d907291a7ba14f642e 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 8.8E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_020335 8ea236745a22b1d907291a7ba14f642e 161 SMART SM00347 32 133 5.4E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_004135 a39c3f5e5a1cc50a9bc72efb720f68c1 494 Gene3D G3DSA:3.30.565.10 327 487 2.0E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_004135 a39c3f5e5a1cc50a9bc72efb720f68c1 494 SMART SM00387 363 485 1.9E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_004135 a39c3f5e5a1cc50a9bc72efb720f68c1 494 Pfam PF05227 CHASE3 domain 44 169 3.5E-25 T 14-10-2018 IPR007891 CHASE3 D172_004135 a39c3f5e5a1cc50a9bc72efb720f68c1 494 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 484 4.4E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_004135 a39c3f5e5a1cc50a9bc72efb720f68c1 494 Gene3D G3DSA:1.20.1440.210 49 173 8.3E-27 T 14-10-2018 D172_004135 a39c3f5e5a1cc50a9bc72efb720f68c1 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 440 4.6E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004135 a39c3f5e5a1cc50a9bc72efb720f68c1 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 463 4.6E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004135 a39c3f5e5a1cc50a9bc72efb720f68c1 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 482 4.6E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004135 a39c3f5e5a1cc50a9bc72efb720f68c1 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 426 4.6E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004135 a39c3f5e5a1cc50a9bc72efb720f68c1 494 SUPERFAMILY SSF47384 239 320 6.08E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_004135 a39c3f5e5a1cc50a9bc72efb720f68c1 494 Pfam PF00512 His Kinase A (phospho-acceptor) domain 255 321 1.6E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_004135 a39c3f5e5a1cc50a9bc72efb720f68c1 494 Gene3D G3DSA:1.10.287.130 218 320 4.3E-17 T 14-10-2018 D172_004135 a39c3f5e5a1cc50a9bc72efb720f68c1 494 SUPERFAMILY SSF55874 311 483 2.1E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_004135 a39c3f5e5a1cc50a9bc72efb720f68c1 494 SMART SM00388 254 322 2.9E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_019630 dccf83bf93cc97d0873b57cbb32636f1 418 Gene3D G3DSA:3.50.50.60 4 394 3.5E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_019630 dccf83bf93cc97d0873b57cbb32636f1 418 SUPERFAMILY SSF51905 2 413 1.55E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_019630 dccf83bf93cc97d0873b57cbb32636f1 418 Gene3D G3DSA:1.10.405.20 76 201 3.5E-25 T 14-10-2018 D172_019630 dccf83bf93cc97d0873b57cbb32636f1 418 Pfam PF01593 Flavin containing amine oxidoreductase 11 268 2.3E-17 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 D172_019630 dccf83bf93cc97d0873b57cbb32636f1 418 Gene3D G3DSA:3.30.70.1990 285 363 3.5E-25 T 14-10-2018 D172_005520 ae2ef4ec51da5f56ccc4c85686a3bcb3 182 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.3E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_005520 ae2ef4ec51da5f56ccc4c85686a3bcb3 182 Gene3D G3DSA:3.30.700.10 8 177 3.7E-10 T 14-10-2018 D172_005520 ae2ef4ec51da5f56ccc4c85686a3bcb3 182 SUPERFAMILY SSF54523 8 156 1.33E-13 T 14-10-2018 D172_005520 ae2ef4ec51da5f56ccc4c85686a3bcb3 182 Pfam PF12019 Type II transport protein GspH 47 169 1.7E-9 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 D172_005520 ae2ef4ec51da5f56ccc4c85686a3bcb3 182 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 3.0E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_003745 f0bbc215b25ebe31968e072e30231701 388 SUPERFAMILY SSF51905 5 381 3.05E-61 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_003745 f0bbc215b25ebe31968e072e30231701 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 3.9E-21 T 14-10-2018 D172_003745 f0bbc215b25ebe31968e072e30231701 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 3.9E-21 T 14-10-2018 D172_003745 f0bbc215b25ebe31968e072e30231701 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 3.9E-21 T 14-10-2018 D172_003745 f0bbc215b25ebe31968e072e30231701 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 3.9E-21 T 14-10-2018 D172_003745 f0bbc215b25ebe31968e072e30231701 388 Gene3D G3DSA:3.50.50.60 6 335 1.3E-112 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_003745 f0bbc215b25ebe31968e072e30231701 388 Gene3D G3DSA:3.30.9.50 79 269 1.3E-112 T 14-10-2018 D172_003745 f0bbc215b25ebe31968e072e30231701 388 Pfam PF01494 FAD binding domain 4 342 3.8E-34 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 D172_003745 f0bbc215b25ebe31968e072e30231701 388 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 387 8.3E-122 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 D172_005335 cfa3b1b550419706ccb616e9b2e11515 437 SUPERFAMILY SSF63433 14 130 3.53E-31 T 14-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 D172_005335 cfa3b1b550419706ccb616e9b2e11515 437 SUPERFAMILY SSF56529 132 435 1.57E-92 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 D172_005335 cfa3b1b550419706ccb616e9b2e11515 437 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 136 433 2.0E-53 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 D172_005335 cfa3b1b550419706ccb616e9b2e11515 437 Gene3D G3DSA:2.30.30.230 1 127 1.5E-32 T 14-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 D172_005335 cfa3b1b550419706ccb616e9b2e11515 437 Pfam PF09298 Fumarylacetoacetase N-terminal 29 130 2.1E-21 T 14-10-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 D172_005335 cfa3b1b550419706ccb616e9b2e11515 437 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 14 436 7.4E-162 T 14-10-2018 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 D172_005335 cfa3b1b550419706ccb616e9b2e11515 437 Gene3D G3DSA:3.90.850.10 128 437 3.0E-118 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 D172_015915 1fe6607095ab91bd5f459335aaf0bdfb 442 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 99 1.6E-6 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D172_015915 1fe6607095ab91bd5f459335aaf0bdfb 442 Gene3D G3DSA:1.10.8.60 334 439 3.5E-41 T 14-10-2018 D172_015915 1fe6607095ab91bd5f459335aaf0bdfb 442 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 442 5.8E-221 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 D172_015915 1fe6607095ab91bd5f459335aaf0bdfb 442 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 442 43.251 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 D172_015915 1fe6607095ab91bd5f459335aaf0bdfb 442 SMART SM01086 334 428 2.6E-22 T 14-10-2018 IPR019489 Clp ATPase, C-terminal D172_015915 1fe6607095ab91bd5f459335aaf0bdfb 442 SUPERFAMILY SSF52540 4 440 3.85E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_015915 1fe6607095ab91bd5f459335aaf0bdfb 442 Pfam PF07724 AAA domain (Cdc48 subfamily) 183 328 1.0E-41 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D172_015915 1fe6607095ab91bd5f459335aaf0bdfb 442 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 334 404 1.5E-7 T 14-10-2018 IPR019489 Clp ATPase, C-terminal D172_015915 1fe6607095ab91bd5f459335aaf0bdfb 442 SMART SM00382 49 331 4.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_008195 2033f51e9cfc343c0be4e95f506bd209 216 Gene3D G3DSA:1.10.1710.10 1 121 1.1E-21 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily D172_008195 2033f51e9cfc343c0be4e95f506bd209 216 Hamap MF_00749 RNA chaperone ProQ [proQ]. 2 216 28.101 T 14-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 D172_008195 2033f51e9cfc343c0be4e95f506bd209 216 SMART SM00945 5 119 4.8E-55 T 14-10-2018 IPR016103 ProQ/FinO domain D172_008195 2033f51e9cfc343c0be4e95f506bd209 216 SUPERFAMILY SSF48657 5 118 2.35E-32 T 14-10-2018 IPR036442 ProQ/FinO domain superfamily D172_008195 2033f51e9cfc343c0be4e95f506bd209 216 Pfam PF17516 ProQ C-terminal domain 166 214 1.6E-19 T 14-10-2018 IPR035236 RNA chaperone ProQ, C-terminal D172_008195 2033f51e9cfc343c0be4e95f506bd209 216 Pfam PF04352 ProQ/FINO family 8 116 1.8E-38 T 14-10-2018 IPR016103 ProQ/FinO domain D172_020665 8debeeb0fd8dcb19a6b24270920b97d9 219 SMART SM00448 1 112 2.4E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_020665 8debeeb0fd8dcb19a6b24270920b97d9 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 215 1.5E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_020665 8debeeb0fd8dcb19a6b24270920b97d9 219 Gene3D G3DSA:1.10.10.10 123 219 3.3E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_020665 8debeeb0fd8dcb19a6b24270920b97d9 219 Pfam PF00072 Response regulator receiver domain 4 112 6.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_020665 8debeeb0fd8dcb19a6b24270920b97d9 219 Gene3D G3DSA:3.40.50.2300 1 122 4.8E-34 T 14-10-2018 D172_020665 8debeeb0fd8dcb19a6b24270920b97d9 219 SUPERFAMILY SSF52172 1 174 2.56E-37 T 14-10-2018 IPR011006 CheY-like superfamily D172_020665 8debeeb0fd8dcb19a6b24270920b97d9 219 SMART SM00862 145 216 1.5E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 Gene3D G3DSA:3.50.50.60 150 270 1.5E-119 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_002360 6748f8810dc921fa4370c67e2642bacd 474 SUPERFAMILY SSF55424 342 465 1.89E-38 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 PIRSF PIRSF000350 1 467 8.4E-89 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 327 5.2E-66 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 2.0E-69 T 14-10-2018 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 2.0E-69 T 14-10-2018 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 2.0E-69 T 14-10-2018 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.0E-69 T 14-10-2018 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 2.0E-69 T 14-10-2018 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 2.0E-69 T 14-10-2018 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 2.0E-69 T 14-10-2018 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 2.0E-69 T 14-10-2018 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.0E-69 T 14-10-2018 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 454 5.3E-34 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.7E-40 T 14-10-2018 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 2.7E-40 T 14-10-2018 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 2.7E-40 T 14-10-2018 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 2.7E-40 T 14-10-2018 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 2.7E-40 T 14-10-2018 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 457 1.3E-147 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 D172_002360 6748f8810dc921fa4370c67e2642bacd 474 Gene3D G3DSA:3.50.50.60 9 331 1.5E-119 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_002360 6748f8810dc921fa4370c67e2642bacd 474 SUPERFAMILY SSF51905 3 337 1.13E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_002360 6748f8810dc921fa4370c67e2642bacd 474 Gene3D G3DSA:3.30.390.30 345 466 8.1E-42 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D172_014005 20e9074d521b4e91d1c54ed5917cb3e3 309 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_014005 20e9074d521b4e91d1c54ed5917cb3e3 309 SMART SM00382 33 216 6.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_014005 20e9074d521b4e91d1c54ed5917cb3e3 309 Gene3D G3DSA:3.40.50.300 1 240 2.2E-66 T 14-10-2018 D172_014005 20e9074d521b4e91d1c54ed5917cb3e3 309 SUPERFAMILY SSF52540 4 235 4.7E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_014005 20e9074d521b4e91d1c54ed5917cb3e3 309 Pfam PF00005 ABC transporter 25 168 2.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_007760 a268f2b103b621b4e1ff1d52a048bd21 244 SMART SM00345 23 82 6.7E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_007760 a268f2b103b621b4e1ff1d52a048bd21 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 2.2E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_007760 a268f2b103b621b4e1ff1d52a048bd21 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 2.2E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_007760 a268f2b103b621b4e1ff1d52a048bd21 244 Pfam PF07729 FCD domain 111 232 2.8E-22 T 14-10-2018 IPR011711 GntR, C-terminal D172_007760 a268f2b103b621b4e1ff1d52a048bd21 244 SUPERFAMILY SSF48008 107 241 3.14E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_007760 a268f2b103b621b4e1ff1d52a048bd21 244 SUPERFAMILY SSF46785 17 86 1.63E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_007760 a268f2b103b621b4e1ff1d52a048bd21 244 SMART SM00895 111 233 5.9E-21 T 14-10-2018 IPR011711 GntR, C-terminal D172_007760 a268f2b103b621b4e1ff1d52a048bd21 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 82 3.3E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_007760 a268f2b103b621b4e1ff1d52a048bd21 244 Gene3D G3DSA:1.10.10.10 12 87 2.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_007760 a268f2b103b621b4e1ff1d52a048bd21 244 Gene3D G3DSA:1.20.120.530 105 240 4.5E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_018715 e598df4fa4dfefe2a624af2bf6daaff5 197 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.544 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 D172_018715 e598df4fa4dfefe2a624af2bf6daaff5 197 Gene3D G3DSA:3.40.50.300 1 141 3.0E-25 T 14-10-2018 D172_018715 e598df4fa4dfefe2a624af2bf6daaff5 197 Pfam PF00265 Thymidine kinase 2 186 3.9E-58 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 D172_018715 e598df4fa4dfefe2a624af2bf6daaff5 197 PIRSF PIRSF035805 1 196 1.1E-58 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 D172_018715 e598df4fa4dfefe2a624af2bf6daaff5 197 Gene3D G3DSA:3.30.60.20 144 192 2.4E-8 T 14-10-2018 D172_018715 e598df4fa4dfefe2a624af2bf6daaff5 197 SUPERFAMILY SSF52540 1 141 2.92E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_018715 e598df4fa4dfefe2a624af2bf6daaff5 197 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 D172_018715 e598df4fa4dfefe2a624af2bf6daaff5 197 SUPERFAMILY SSF57716 142 189 2.33E-16 T 14-10-2018 D172_009775 9f39173e0d6a9eff4b6b30ffccc0194e 616 SUPERFAMILY SSF143975 2 431 1.28E-138 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D172_009775 9f39173e0d6a9eff4b6b30ffccc0194e 616 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 614 56.627 T 14-10-2018 D172_009775 9f39173e0d6a9eff4b6b30ffccc0194e 616 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 613 8.1E-285 T 14-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 D172_009775 9f39173e0d6a9eff4b6b30ffccc0194e 616 Pfam PF00920 Dehydratase family 66 610 1.8E-158 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D172_009775 9f39173e0d6a9eff4b6b30ffccc0194e 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 518 529 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D172_009775 9f39173e0d6a9eff4b6b30ffccc0194e 616 SUPERFAMILY SSF52016 432 612 1.26E-55 T 14-10-2018 D172_009775 9f39173e0d6a9eff4b6b30ffccc0194e 616 Gene3D G3DSA:3.50.30.80 432 581 8.8E-51 T 14-10-2018 D172_009775 9f39173e0d6a9eff4b6b30ffccc0194e 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D172_005235 ceb8dced8280a955375bd2d960c808ec 280 SUPERFAMILY SSF47616 118 260 1.25E-34 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D172_005235 ceb8dced8280a955375bd2d960c808ec 280 Pfam PF02798 Glutathione S-transferase, N-terminal domain 68 128 3.7E-7 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D172_005235 ceb8dced8280a955375bd2d960c808ec 280 Gene3D G3DSA:1.20.1050.10 134 250 2.4E-111 T 14-10-2018 D172_005235 ceb8dced8280a955375bd2d960c808ec 280 Gene3D G3DSA:3.40.30.10 19 256 2.4E-111 T 14-10-2018 D172_005235 ceb8dced8280a955375bd2d960c808ec 280 Pfam PF13410 Glutathione S-transferase, C-terminal domain 177 243 1.9E-8 T 14-10-2018 D172_005235 ceb8dced8280a955375bd2d960c808ec 280 SUPERFAMILY SSF52833 40 131 8.11E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_013645 8e0617e5f4af5abdb0b5103d36a7188a 225 Pfam PF05036 Sporulation related domain 139 215 2.2E-7 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 D172_013645 8e0617e5f4af5abdb0b5103d36a7188a 225 SUPERFAMILY SSF110997 137 215 5.23E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D172_009660 8e804b9709d2be307827bbbcfb6fc0c6 341 Gene3D G3DSA:3.30.1150.10 40 109 2.5E-7 T 14-10-2018 D172_009660 8e804b9709d2be307827bbbcfb6fc0c6 341 SUPERFAMILY SSF74653 43 108 9.22E-8 T 14-10-2018 D172_009660 8e804b9709d2be307827bbbcfb6fc0c6 341 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 44 107 1.5E-5 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 D172_009850 23d13ea32435e320f82a43ed553b787a 938 Pfam PF00593 TonB dependent receptor 406 937 1.6E-26 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_009850 23d13ea32435e320f82a43ed553b787a 938 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 159 7.8E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_009850 23d13ea32435e320f82a43ed553b787a 938 SUPERFAMILY SSF56935 33 937 2.29E-76 T 14-10-2018 D172_009850 23d13ea32435e320f82a43ed553b787a 938 Gene3D G3DSA:2.170.130.10 46 162 1.9E-14 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_009850 23d13ea32435e320f82a43ed553b787a 938 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 37 937 1.7E-166 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_004230 ec38ead724d486083f1fef32a78c9f9f 77 ProSitePatterns PS00018 EF-hand calcium-binding domain. 60 72 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_004230 ec38ead724d486083f1fef32a78c9f9f 77 Gene3D G3DSA:1.10.238.10 20 77 1.3E-10 T 14-10-2018 D172_004230 ec38ead724d486083f1fef32a78c9f9f 77 Pfam PF13202 EF hand 56 75 9.9E-7 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_004230 ec38ead724d486083f1fef32a78c9f9f 77 Pfam PF13202 EF hand 28 45 0.14 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_004230 ec38ead724d486083f1fef32a78c9f9f 77 SUPERFAMILY SSF47473 22 76 3.78E-10 T 14-10-2018 IPR011992 EF-hand domain pair D172_004125 9da58088694c84da666a8f15eb8b3c4d 446 Pfam PF00158 Sigma-54 interaction domain 135 300 3.4E-62 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D172_004125 9da58088694c84da666a8f15eb8b3c4d 446 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 159 172 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D172_004125 9da58088694c84da666a8f15eb8b3c4d 446 SMART SM00382 155 297 5.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_004125 9da58088694c84da666a8f15eb8b3c4d 446 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 405 422 4.4E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_004125 9da58088694c84da666a8f15eb8b3c4d 446 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 442 4.4E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_004125 9da58088694c84da666a8f15eb8b3c4d 446 SUPERFAMILY SSF52540 135 365 9.47E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_004125 9da58088694c84da666a8f15eb8b3c4d 446 SUPERFAMILY SSF46689 345 440 3.88E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_004125 9da58088694c84da666a8f15eb8b3c4d 446 SUPERFAMILY SSF52172 1 179 5.69E-27 T 14-10-2018 IPR011006 CheY-like superfamily D172_004125 9da58088694c84da666a8f15eb8b3c4d 446 Pfam PF00072 Response regulator receiver domain 4 111 1.0E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004125 9da58088694c84da666a8f15eb8b3c4d 446 Gene3D G3DSA:1.10.10.60 381 441 1.8E-15 T 14-10-2018 D172_004125 9da58088694c84da666a8f15eb8b3c4d 446 SMART SM00448 2 113 6.9E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004125 9da58088694c84da666a8f15eb8b3c4d 446 Gene3D G3DSA:3.40.50.300 121 305 2.4E-58 T 14-10-2018 D172_004125 9da58088694c84da666a8f15eb8b3c4d 446 Pfam PF02954 Bacterial regulatory protein, Fis family 399 439 3.0E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_004125 9da58088694c84da666a8f15eb8b3c4d 446 Gene3D G3DSA:3.40.50.2300 3 118 7.7E-19 T 14-10-2018 D172_004125 9da58088694c84da666a8f15eb8b3c4d 446 Gene3D G3DSA:1.10.8.60 306 380 2.9E-20 T 14-10-2018 D172_009515 e0dc15a81537f362b0c47f5e6e3014e0 228 Pfam PF07681 DoxX 25 122 3.4E-19 T 14-10-2018 IPR032808 DoxX family D172_004815 f7c823322b678bab2c6f163209a0040d 409 SUPERFAMILY SSF111352 11 381 1.7E-103 T 14-10-2018 D172_004815 f7c823322b678bab2c6f163209a0040d 409 Pfam PF00909 Ammonium Transporter Family 17 400 3.9E-96 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 D172_004815 f7c823322b678bab2c6f163209a0040d 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 10 403 5.1E-204 T 14-10-2018 IPR019879 Ammonium transporter, marine subtype D172_004815 f7c823322b678bab2c6f163209a0040d 409 ProSitePatterns PS01219 Ammonium transporters signature. 161 186 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 D172_004815 f7c823322b678bab2c6f163209a0040d 409 Gene3D G3DSA:1.10.3430.10 2 408 1.7E-118 T 14-10-2018 IPR029020 Ammonium/urea transporter D172_012335 287007bf632863d30c890b50f283a7e0 117 Pfam PF13473 Cupredoxin-like domain 11 116 3.5E-29 T 14-10-2018 IPR028096 EfeO-type cupredoxin-like domain D172_012335 287007bf632863d30c890b50f283a7e0 117 Gene3D G3DSA:2.60.40.420 22 117 1.2E-25 T 14-10-2018 IPR008972 Cupredoxin D172_012335 287007bf632863d30c890b50f283a7e0 117 SUPERFAMILY SSF49503 12 114 3.19E-18 T 14-10-2018 IPR008972 Cupredoxin D172_019090 c641b51d895b0da741f2bef105a85f33 763 Gene3D G3DSA:3.30.365.10 333 568 8.9E-47 T 14-10-2018 D172_019090 c641b51d895b0da741f2bef105a85f33 763 SMART SM01008 217 303 1.3E-13 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead D172_019090 c641b51d895b0da741f2bef105a85f33 763 SUPERFAMILY SSF56003 13 245 2.27E-31 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 D172_019090 c641b51d895b0da741f2bef105a85f33 763 SUPERFAMILY SSF56003 296 761 1.86E-102 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 D172_019090 c641b51d895b0da741f2bef105a85f33 763 Gene3D G3DSA:3.30.365.10 49 184 1.7E-22 T 14-10-2018 D172_019090 c641b51d895b0da741f2bef105a85f33 763 Gene3D G3DSA:3.30.365.10 357 448 8.9E-47 T 14-10-2018 D172_019090 c641b51d895b0da741f2bef105a85f33 763 Gene3D G3DSA:3.30.365.10 594 758 3.0E-37 T 14-10-2018 D172_019090 c641b51d895b0da741f2bef105a85f33 763 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 616 707 5.1E-14 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 D172_019090 c641b51d895b0da741f2bef105a85f33 763 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 328 599 1.8E-29 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 D172_019090 c641b51d895b0da741f2bef105a85f33 763 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 4 185 2.5E-14 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 D172_019090 c641b51d895b0da741f2bef105a85f33 763 PIRSF PIRSF036389 4 760 1.2E-206 T 14-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related D172_008885 7e3b3a35bd2282b1b490af689a90cd05 605 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 50 72 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 D172_008885 7e3b3a35bd2282b1b490af689a90cd05 605 Pfam PF00069 Protein kinase domain 44 231 6.9E-13 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 D172_008885 7e3b3a35bd2282b1b490af689a90cd05 605 Gene3D G3DSA:1.10.510.10 38 361 4.7E-17 T 14-10-2018 D172_008885 7e3b3a35bd2282b1b490af689a90cd05 605 SUPERFAMILY SSF56112 43 293 1.37E-24 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily D172_008885 7e3b3a35bd2282b1b490af689a90cd05 605 SMART SM00220 44 308 4.0E-5 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 D172_018010 31019fef28feb44992159b12f6672840 230 Pfam PF12973 ChrR Cupin-like domain 19 109 2.8E-39 T 14-10-2018 IPR025979 ChrR-like cupin domain D172_018010 31019fef28feb44992159b12f6672840 230 Pfam PF12973 ChrR Cupin-like domain 134 214 7.8E-8 T 14-10-2018 IPR025979 ChrR-like cupin domain D172_018010 31019fef28feb44992159b12f6672840 230 SUPERFAMILY SSF51182 4 128 8.43E-37 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily D172_018010 31019fef28feb44992159b12f6672840 230 SUPERFAMILY SSF51182 132 217 5.05E-13 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily D172_018010 31019fef28feb44992159b12f6672840 230 Gene3D G3DSA:2.60.120.10 1 224 1.9E-80 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_009235 c43316e2a74f1026677ddf812825e010 651 SUPERFAMILY SSF69318 441 570 5.36E-12 T 14-10-2018 D172_009235 c43316e2a74f1026677ddf812825e010 651 SUPERFAMILY SSF69318 56 291 9.59E-34 T 14-10-2018 D172_009235 c43316e2a74f1026677ddf812825e010 651 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 112 179 3.8E-10 T 14-10-2018 D172_009235 c43316e2a74f1026677ddf812825e010 651 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 225 289 4.5E-10 T 14-10-2018 D172_009235 c43316e2a74f1026677ddf812825e010 651 Pfam PF07593 ASPIC and UnbV 578 644 4.0E-12 T 14-10-2018 IPR011519 ASPIC/UnbV D172_009020 f7f29495fe661a97b930177c0665e6b6 393 PIRSF PIRSF000429 1 393 3.5E-113 T 14-10-2018 IPR002155 Thiolase GO:0016747 D172_009020 f7f29495fe661a97b930177c0665e6b6 393 Gene3D G3DSA:3.40.47.10 7 276 1.2E-137 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_009020 f7f29495fe661a97b930177c0665e6b6 393 Gene3D G3DSA:3.40.47.10 128 390 1.2E-137 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_009020 f7f29495fe661a97b930177c0665e6b6 393 Pfam PF00108 Thiolase, N-terminal domain 6 263 2.1E-83 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 D172_009020 f7f29495fe661a97b930177c0665e6b6 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 D172_009020 f7f29495fe661a97b930177c0665e6b6 393 SUPERFAMILY SSF53901 271 391 6.63E-40 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_009020 f7f29495fe661a97b930177c0665e6b6 393 SUPERFAMILY SSF53901 6 270 6.26E-75 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_009020 f7f29495fe661a97b930177c0665e6b6 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 391 6.9E-128 T 14-10-2018 IPR002155 Thiolase GO:0016747 D172_009020 f7f29495fe661a97b930177c0665e6b6 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 1.7E-45 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 D172_011295 98f15a19a0b1c29b2161546ea61b6b12 490 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 8 185 5.1E-49 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D172_011295 98f15a19a0b1c29b2161546ea61b6b12 490 SUPERFAMILY SSF55347 175 484 2.88E-107 T 14-10-2018 D172_011295 98f15a19a0b1c29b2161546ea61b6b12 490 Gene3D G3DSA:3.30.360.10 175 475 2.7E-157 T 14-10-2018 D172_011295 98f15a19a0b1c29b2161546ea61b6b12 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 165 193 9.2E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D172_011295 98f15a19a0b1c29b2161546ea61b6b12 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 325 351 9.2E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D172_011295 98f15a19a0b1c29b2161546ea61b6b12 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 235 251 9.2E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D172_011295 98f15a19a0b1c29b2161546ea61b6b12 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 217 234 9.2E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D172_011295 98f15a19a0b1c29b2161546ea61b6b12 490 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 141 154 9.2E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D172_011295 98f15a19a0b1c29b2161546ea61b6b12 490 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 5 484 4.1E-165 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D172_011295 98f15a19a0b1c29b2161546ea61b6b12 490 Gene3D G3DSA:3.40.50.720 7 434 2.7E-157 T 14-10-2018 D172_011295 98f15a19a0b1c29b2161546ea61b6b12 490 SUPERFAMILY SSF51735 2 188 8.07E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_011295 98f15a19a0b1c29b2161546ea61b6b12 490 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 187 483 3.9E-111 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D172_011295 98f15a19a0b1c29b2161546ea61b6b12 490 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 4 485 77.088 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D172_011295 98f15a19a0b1c29b2161546ea61b6b12 490 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 175 181 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D172_011295 98f15a19a0b1c29b2161546ea61b6b12 490 PIRSF PIRSF000110 1 487 7.5E-162 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 D172_006465 6c3f49fa90e8385f829dfbaceed7897e 480 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 131 241 5.9E-21 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_006465 6c3f49fa90e8385f829dfbaceed7897e 480 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 132 465 5.1E-114 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_006465 6c3f49fa90e8385f829dfbaceed7897e 480 Gene3D G3DSA:3.40.50.720 132 466 4.6E-117 T 14-10-2018 D172_006465 6c3f49fa90e8385f829dfbaceed7897e 480 SUPERFAMILY SSF51735 131 307 2.19E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_006465 6c3f49fa90e8385f829dfbaceed7897e 480 SMART SM00846 130 291 4.7E-51 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_006465 6c3f49fa90e8385f829dfbaceed7897e 480 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 289 296 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_006465 6c3f49fa90e8385f829dfbaceed7897e 480 SUPERFAMILY SSF55347 291 454 5.06E-55 T 14-10-2018 D172_006465 6c3f49fa90e8385f829dfbaceed7897e 480 Gene3D G3DSA:3.30.360.10 290 455 4.6E-117 T 14-10-2018 D172_006465 6c3f49fa90e8385f829dfbaceed7897e 480 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 296 453 1.7E-50 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_006465 6c3f49fa90e8385f829dfbaceed7897e 480 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 285 303 1.4E-16 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_006465 6c3f49fa90e8385f829dfbaceed7897e 480 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 312 328 1.4E-16 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_006465 6c3f49fa90e8385f829dfbaceed7897e 480 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 368 385 1.4E-16 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_006465 6c3f49fa90e8385f829dfbaceed7897e 480 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 249 262 1.4E-16 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_012030 ee17e3b9d6c5806a83140812d2ec10bd 393 Gene3D G3DSA:3.30.9.50 86 272 1.6E-93 T 14-10-2018 D172_012030 ee17e3b9d6c5806a83140812d2ec10bd 393 Gene3D G3DSA:3.50.50.60 10 337 1.6E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_012030 ee17e3b9d6c5806a83140812d2ec10bd 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 2.6E-21 T 14-10-2018 D172_012030 ee17e3b9d6c5806a83140812d2ec10bd 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 2.6E-21 T 14-10-2018 D172_012030 ee17e3b9d6c5806a83140812d2ec10bd 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 2.6E-21 T 14-10-2018 D172_012030 ee17e3b9d6c5806a83140812d2ec10bd 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 2.6E-21 T 14-10-2018 D172_012030 ee17e3b9d6c5806a83140812d2ec10bd 393 SUPERFAMILY SSF51905 9 388 2.39E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_012030 ee17e3b9d6c5806a83140812d2ec10bd 393 Pfam PF01494 FAD binding domain 153 339 1.8E-26 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 D172_012030 ee17e3b9d6c5806a83140812d2ec10bd 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 9 388 2.2E-102 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 D172_013825 43a75cb3e67e1b67afe3f8860a886d64 278 Gene3D G3DSA:3.30.70.100 178 266 5.2E-17 T 14-10-2018 D172_013825 43a75cb3e67e1b67afe3f8860a886d64 278 Pfam PF00924 Mechanosensitive ion channel 67 262 2.4E-34 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 D172_013825 43a75cb3e67e1b67afe3f8860a886d64 278 Pfam PF05552 Conserved TM helix 15 60 8.9E-9 T 14-10-2018 IPR008910 Conserved TM helix D172_013825 43a75cb3e67e1b67afe3f8860a886d64 278 SUPERFAMILY SSF50182 110 173 6.54E-13 T 14-10-2018 IPR010920 LSM domain superfamily D172_013825 43a75cb3e67e1b67afe3f8860a886d64 278 SUPERFAMILY SSF82861 24 108 9.55E-17 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 D172_013825 43a75cb3e67e1b67afe3f8860a886d64 278 SUPERFAMILY SSF82689 176 273 5.36E-21 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 D172_013825 43a75cb3e67e1b67afe3f8860a886d64 278 Gene3D G3DSA:2.30.30.60 125 173 4.9E-11 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily D172_005095 87b939e7bd6eae5000b690dc15fd8add 371 SUPERFAMILY SSF109604 138 338 3.45E-32 T 14-10-2018 D172_005095 87b939e7bd6eae5000b690dc15fd8add 371 SUPERFAMILY SSF52172 5 122 4.41E-16 T 14-10-2018 IPR011006 CheY-like superfamily D172_005095 87b939e7bd6eae5000b690dc15fd8add 371 Gene3D G3DSA:3.40.50.2300 1 126 1.1E-15 T 14-10-2018 D172_005095 87b939e7bd6eae5000b690dc15fd8add 371 SMART SM00448 6 119 1.4E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005095 87b939e7bd6eae5000b690dc15fd8add 371 PIRSF PIRSF036883 1 367 1.4E-53 T 14-10-2018 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative D172_005095 87b939e7bd6eae5000b690dc15fd8add 371 Gene3D G3DSA:1.10.3210.10 134 360 1.4E-30 T 14-10-2018 D172_005095 87b939e7bd6eae5000b690dc15fd8add 371 Pfam PF00072 Response regulator receiver domain 8 119 1.0E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005095 87b939e7bd6eae5000b690dc15fd8add 371 Pfam PF08668 HDOD domain 144 286 3.4E-25 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD D172_011510 b18ac24d7d23f81cd372c091f9084c7c 873 SUPERFAMILY SSF46548 335 445 7.5E-20 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D172_011510 b18ac24d7d23f81cd372c091f9084c7c 873 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D172_011510 b18ac24d7d23f81cd372c091f9084c7c 873 Gene3D G3DSA:1.10.1060.10 363 444 1.5E-11 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D172_011510 b18ac24d7d23f81cd372c091f9084c7c 873 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 789 232.636 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 D172_011510 b18ac24d7d23f81cd372c091f9084c7c 873 Pfam PF13237 4Fe-4S dicluster domain 374 427 1.3E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D172_011510 b18ac24d7d23f81cd372c091f9084c7c 873 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 1.0E-182 T 14-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 D172_011510 b18ac24d7d23f81cd372c091f9084c7c 873 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 3.3E-32 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain D172_011510 b18ac24d7d23f81cd372c091f9084c7c 873 Gene3D G3DSA:3.40.50.11540 145 292 1.6E-10 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_011510 b18ac24d7d23f81cd372c091f9084c7c 873 Pfam PF10531 SLBB domain 296 344 9.2E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_011510 b18ac24d7d23f81cd372c091f9084c7c 873 SUPERFAMILY SSF142019 95 303 1.06E-60 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_011510 b18ac24d7d23f81cd372c091f9084c7c 873 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 2.8E-48 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Gene3D G3DSA:1.10.1200.10 1055 1132 5.8E-24 T 14-10-2018 IPR036736 ACP-like superfamily D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Gene3D G3DSA:1.10.1200.10 2114 2194 1.2E-23 T 14-10-2018 IPR036736 ACP-like superfamily D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Gene3D G3DSA:3.40.50.12780 1592 2010 2.9E-122 T 14-10-2018 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Gene3D G3DSA:3.40.50.12780 533 951 4.4E-122 T 14-10-2018 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Pfam PF13193 AMP-binding enzyme C-terminal domain 2024 2098 4.9E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Pfam PF13193 AMP-binding enzyme C-terminal domain 965 1039 4.9E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Pfam PF00550 Phosphopantetheine attachment site 1067 1127 3.3E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Pfam PF00550 Phosphopantetheine attachment site 2126 2188 4.9E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 SMART SM00823 Phosphopantetheine attachment site 2123 2192 0.0032 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 SMART SM00823 Phosphopantetheine attachment site 1064 1133 2.5E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Gene3D G3DSA:3.30.559.10 2236 2597 5.2E-50 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 SUPERFAMILY SSF52777 1147 1317 3.65E-36 T 14-10-2018 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Gene3D G3DSA:3.30.559.10 1146 1510 1.2E-115 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 SUPERFAMILY SSF47336 2115 2189 7.33E-19 T 14-10-2018 IPR036736 ACP-like superfamily D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Gene3D G3DSA:3.30.559.30 1321 1565 1.2E-115 T 14-10-2018 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Pfam PF00501 AMP-binding enzyme 547 957 7.7E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Pfam PF00501 AMP-binding enzyme 1606 2016 6.1E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 SUPERFAMILY SSF52777 1328 1569 2.0E-47 T 14-10-2018 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Gene3D G3DSA:3.30.300.30 2011 2113 2.8E-31 T 14-10-2018 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Gene3D G3DSA:3.30.300.30 952 1054 2.8E-31 T 14-10-2018 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Pfam PF00668 Condensation domain 2230 2648 7.6E-34 T 14-10-2018 IPR001242 Condensation domain D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Pfam PF00668 Condensation domain 1143 1586 2.6E-91 T 14-10-2018 IPR001242 Condensation domain D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Pfam PF00668 Condensation domain 86 527 2.2E-91 T 14-10-2018 IPR001242 Condensation domain D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 SUPERFAMILY SSF52777 269 510 2.22E-47 T 14-10-2018 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 SUPERFAMILY SSF56801 511 1076 2.62E-140 T 14-10-2018 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 SUPERFAMILY SSF56801 1570 2135 2.88E-140 T 14-10-2018 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 568 981 5.5E-124 T 14-10-2018 IPR010071 Amino acid adenylation domain D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1627 2040 5.0E-124 T 14-10-2018 IPR010071 Amino acid adenylation domain D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 SUPERFAMILY SSF52777 2409 2647 2.33E-21 T 14-10-2018 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 SUPERFAMILY SSF52777 2236 2406 3.89E-20 T 14-10-2018 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 698 709 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 SUPERFAMILY SSF47336 1056 1129 1.44E-18 T 14-10-2018 IPR036736 ACP-like superfamily D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Gene3D G3DSA:3.30.559.30 262 506 4.0E-116 T 14-10-2018 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Gene3D G3DSA:3.30.559.30 2408 2646 5.2E-50 T 14-10-2018 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 Gene3D G3DSA:3.30.559.10 88 451 4.0E-116 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 SUPERFAMILY SSF52777 90 258 1.22E-36 T 14-10-2018 D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 PRINTS PR00154 AMP-binding signature 705 713 6.6E-5 T 14-10-2018 IPR020459 AMP-binding D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 PRINTS PR00154 AMP-binding signature 693 704 6.6E-5 T 14-10-2018 IPR020459 AMP-binding D172_003280 d4a4fd3c5be45e9a2597b873c38a30fc 2652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1757 1768 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_020650 29e9c3fec2c26b04fef48e560923c349 229 Gene3D G3DSA:1.20.910.10 4 220 1.7E-58 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 D172_020650 29e9c3fec2c26b04fef48e560923c349 229 Pfam PF14518 Iron-containing redox enzyme 40 207 3.2E-27 T 14-10-2018 D172_020650 29e9c3fec2c26b04fef48e560923c349 229 SUPERFAMILY SSF48613 2 215 1.57E-64 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 D172_002815 794499f83cad851af8dd6af78d81fca8 389 Pfam PF02018 Carbohydrate binding domain 23 122 6.2E-8 T 14-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 D172_002815 794499f83cad851af8dd6af78d81fca8 389 Pfam PF08787 Alginate lyase 187 373 1.0E-23 T 14-10-2018 IPR014895 Alginate lyase 2 D172_002815 794499f83cad851af8dd6af78d81fca8 389 SUPERFAMILY SSF49899 162 389 3.75E-125 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D172_002815 794499f83cad851af8dd6af78d81fca8 389 SUPERFAMILY SSF49785 23 144 8.29E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_002815 794499f83cad851af8dd6af78d81fca8 389 Gene3D G3DSA:2.60.120.200 163 389 1.2E-113 T 14-10-2018 D172_002815 794499f83cad851af8dd6af78d81fca8 389 Gene3D G3DSA:2.60.120.260 24 145 3.9E-17 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_015490 18097fdb55a16a43f58d3f31d08bf2ca 175 SMART SM00271 1 66 1.2E-7 T 14-10-2018 IPR001623 DnaJ domain D172_015490 18097fdb55a16a43f58d3f31d08bf2ca 175 SUPERFAMILY SSF47144 77 174 6.15E-23 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D172_015490 18097fdb55a16a43f58d3f31d08bf2ca 175 Gene3D G3DSA:1.20.1280.20 80 174 1.2E-25 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D172_015490 18097fdb55a16a43f58d3f31d08bf2ca 175 Gene3D G3DSA:1.10.287.110 1 79 1.8E-20 T 14-10-2018 IPR036869 Chaperone J-domain superfamily D172_015490 18097fdb55a16a43f58d3f31d08bf2ca 175 Pfam PF00226 DnaJ domain 4 70 3.1E-7 T 14-10-2018 IPR001623 DnaJ domain D172_015490 18097fdb55a16a43f58d3f31d08bf2ca 175 SUPERFAMILY SSF46565 2 73 2.36E-16 T 14-10-2018 IPR036869 Chaperone J-domain superfamily D172_015490 18097fdb55a16a43f58d3f31d08bf2ca 175 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 172 3.4E-37 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D172_015490 18097fdb55a16a43f58d3f31d08bf2ca 175 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 166 2.9E-17 T 14-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D172_015490 18097fdb55a16a43f58d3f31d08bf2ca 175 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 173 23.526 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D172_002870 2d14451c80bfcd682e1fdf92b69204de 411 SUPERFAMILY SSF55073 259 409 4.55E-38 T 14-10-2018 IPR029787 Nucleotide cyclase D172_002870 2d14451c80bfcd682e1fdf92b69204de 411 Pfam PF00072 Response regulator receiver domain 5 105 1.4E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_002870 2d14451c80bfcd682e1fdf92b69204de 411 Pfam PF00072 Response regulator receiver domain 125 233 2.2E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_002870 2d14451c80bfcd682e1fdf92b69204de 411 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 408 2.5E-36 T 14-10-2018 IPR000160 GGDEF domain D172_002870 2d14451c80bfcd682e1fdf92b69204de 411 Gene3D G3DSA:3.40.50.2300 122 252 3.6E-29 T 14-10-2018 D172_002870 2d14451c80bfcd682e1fdf92b69204de 411 SMART SM00448 123 237 1.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_002870 2d14451c80bfcd682e1fdf92b69204de 411 SMART SM00448 3 114 0.003 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_002870 2d14451c80bfcd682e1fdf92b69204de 411 Gene3D G3DSA:3.30.70.270 253 411 2.5E-45 T 14-10-2018 D172_002870 2d14451c80bfcd682e1fdf92b69204de 411 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 251 409 3.4E-41 T 14-10-2018 IPR000160 GGDEF domain D172_002870 2d14451c80bfcd682e1fdf92b69204de 411 SUPERFAMILY SSF52172 3 101 2.28E-14 T 14-10-2018 IPR011006 CheY-like superfamily D172_002870 2d14451c80bfcd682e1fdf92b69204de 411 SUPERFAMILY SSF52172 122 252 2.56E-30 T 14-10-2018 IPR011006 CheY-like superfamily D172_002870 2d14451c80bfcd682e1fdf92b69204de 411 Gene3D G3DSA:3.40.50.2300 1 121 1.3E-13 T 14-10-2018 D172_002870 2d14451c80bfcd682e1fdf92b69204de 411 SMART SM00267 243 411 2.4E-39 T 14-10-2018 IPR000160 GGDEF domain D172_005390 5c5161838d5860b65fe91644e95b7809 526 Gene3D G3DSA:3.40.720.10 223 463 2.9E-7 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D172_005390 5c5161838d5860b65fe91644e95b7809 526 Pfam PF11658 Cellulose biosynthesis protein BcsG 9 519 4.2E-189 T 14-10-2018 IPR017744 Cellulose biosynthesis protein BcsG D172_005390 5c5161838d5860b65fe91644e95b7809 526 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 7 522 1.9E-199 T 14-10-2018 IPR017744 Cellulose biosynthesis protein BcsG D172_004170 318029946ca1fe9682821da4d345b845 511 Gene3D G3DSA:3.40.630.10 160 509 3.6E-77 T 14-10-2018 D172_004170 318029946ca1fe9682821da4d345b845 511 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 340 347 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D172_004170 318029946ca1fe9682821da4d345b845 511 SUPERFAMILY SSF53187 169 506 1.35E-65 T 14-10-2018 D172_004170 318029946ca1fe9682821da4d345b845 511 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 174 504 4.0E-61 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D172_004170 318029946ca1fe9682821da4d345b845 511 PRINTS PR00481 Cytosol aminopeptidase signature 368 383 5.9E-30 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_004170 318029946ca1fe9682821da4d345b845 511 PRINTS PR00481 Cytosol aminopeptidase signature 314 335 5.9E-30 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_004170 318029946ca1fe9682821da4d345b845 511 PRINTS PR00481 Cytosol aminopeptidase signature 254 271 5.9E-30 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_004170 318029946ca1fe9682821da4d345b845 511 PRINTS PR00481 Cytosol aminopeptidase signature 336 356 5.9E-30 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_004170 318029946ca1fe9682821da4d345b845 511 PRINTS PR00481 Cytosol aminopeptidase signature 276 297 5.9E-30 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_020445 d1bb325779933fb68cb2286fc346e71b 151 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 146 1.2E-49 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 D172_020445 d1bb325779933fb68cb2286fc346e71b 151 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 148 32.5 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 D172_020710 dc7740b9cd02870485fd6dbed73a79e0 410 SUPERFAMILY SSF53649 3 401 5.23E-70 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D172_020710 dc7740b9cd02870485fd6dbed73a79e0 410 TIGRFAM TIGR01696 deoB: phosphopentomutase 4 396 2.0E-144 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 D172_020710 dc7740b9cd02870485fd6dbed73a79e0 410 Hamap MF_00740 Phosphopentomutase [deoB]. 1 398 51.638 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 D172_020710 dc7740b9cd02870485fd6dbed73a79e0 410 SUPERFAMILY SSF143856 111 227 1.44E-49 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 D172_020710 dc7740b9cd02870485fd6dbed73a79e0 410 PIRSF PIRSF001491 1 402 1.9E-156 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 D172_020710 dc7740b9cd02870485fd6dbed73a79e0 410 Pfam PF01676 Metalloenzyme superfamily 3 389 2.2E-33 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 D172_020710 dc7740b9cd02870485fd6dbed73a79e0 410 Gene3D G3DSA:3.40.720.10 5 398 5.9E-151 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D172_020710 dc7740b9cd02870485fd6dbed73a79e0 410 Gene3D G3DSA:3.30.70.1250 109 230 5.9E-151 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 D172_003645 658134494e3f38fd88b5ff2c21705624 772 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 389 502 9.9E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_003645 658134494e3f38fd88b5ff2c21705624 772 Gene3D G3DSA:3.30.450.20 137 265 1.2E-22 T 14-10-2018 D172_003645 658134494e3f38fd88b5ff2c21705624 772 Gene3D G3DSA:1.10.287.130 266 342 3.6E-18 T 14-10-2018 D172_003645 658134494e3f38fd88b5ff2c21705624 772 Gene3D G3DSA:3.30.565.10 343 504 1.6E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_003645 658134494e3f38fd88b5ff2c21705624 772 Gene3D G3DSA:1.20.120.160 656 771 3.0E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_003645 658134494e3f38fd88b5ff2c21705624 772 Pfam PF00072 Response regulator receiver domain 519 630 3.1E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_003645 658134494e3f38fd88b5ff2c21705624 772 PIRSF PIRSF003182 10 772 7.4E-201 T 14-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 D172_003645 658134494e3f38fd88b5ff2c21705624 772 SUPERFAMILY SSF47226 657 770 4.19E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_003645 658134494e3f38fd88b5ff2c21705624 772 SUPERFAMILY SSF47384 264 342 5.69E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_003645 658134494e3f38fd88b5ff2c21705624 772 SUPERFAMILY SSF52172 515 646 1.42E-26 T 14-10-2018 IPR011006 CheY-like superfamily D172_003645 658134494e3f38fd88b5ff2c21705624 772 SMART SM00387 388 503 1.2E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_003645 658134494e3f38fd88b5ff2c21705624 772 SMART SM00448 517 630 1.9E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_003645 658134494e3f38fd88b5ff2c21705624 772 SUPERFAMILY SSF55785 135 261 2.27E-23 T 14-10-2018 IPR035965 PAS domain superfamily D172_003645 658134494e3f38fd88b5ff2c21705624 772 Gene3D G3DSA:3.40.50.2300 508 643 6.9E-28 T 14-10-2018 D172_003645 658134494e3f38fd88b5ff2c21705624 772 SMART SM00091 150 216 1.1E-6 T 14-10-2018 IPR000014 PAS domain D172_003645 658134494e3f38fd88b5ff2c21705624 772 Pfam PF08448 PAS fold 156 265 4.8E-18 T 14-10-2018 IPR013656 PAS fold-4 D172_003645 658134494e3f38fd88b5ff2c21705624 772 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 270 3.7E-18 T 14-10-2018 IPR000014 PAS domain D172_003645 658134494e3f38fd88b5ff2c21705624 772 Pfam PF01627 Hpt domain 684 753 2.0E-9 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D172_003645 658134494e3f38fd88b5ff2c21705624 772 SMART SM00388 276 341 2.2E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_003645 658134494e3f38fd88b5ff2c21705624 772 Pfam PF00512 His Kinase A (phospho-acceptor) domain 277 340 4.3E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_003645 658134494e3f38fd88b5ff2c21705624 772 SUPERFAMILY SSF55874 330 501 4.06E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_003645 658134494e3f38fd88b5ff2c21705624 772 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 442 7.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_003645 658134494e3f38fd88b5ff2c21705624 772 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 456 7.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_003645 658134494e3f38fd88b5ff2c21705624 772 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 481 7.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_003645 658134494e3f38fd88b5ff2c21705624 772 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 500 7.8E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_009770 1d5ea5a7db4feaa9eac22a8520b3fe43 206 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 35 44 - T 14-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D172_009770 1d5ea5a7db4feaa9eac22a8520b3fe43 206 SUPERFAMILY SSF51569 2 204 1.08E-65 T 14-10-2018 D172_009770 1d5ea5a7db4feaa9eac22a8520b3fe43 206 Pfam PF01081 KDPG and KHG aldolase 3 198 1.4E-70 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D172_009770 1d5ea5a7db4feaa9eac22a8520b3fe43 206 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 3 204 1.7E-77 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D172_009770 1d5ea5a7db4feaa9eac22a8520b3fe43 206 Gene3D G3DSA:3.20.20.70 1 206 3.2E-72 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_009770 1d5ea5a7db4feaa9eac22a8520b3fe43 206 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 123 136 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D172_019425 dadafa04a3d285a14437cf385aaf1490 487 SUPERFAMILY SSF53720 3 482 6.41E-165 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D172_019425 dadafa04a3d285a14437cf385aaf1490 487 Gene3D G3DSA:3.40.605.10 1 250 3.3E-92 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D172_019425 dadafa04a3d285a14437cf385aaf1490 487 Gene3D G3DSA:3.40.309.10 251 485 3.8E-80 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D172_019425 dadafa04a3d285a14437cf385aaf1490 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 D172_019425 dadafa04a3d285a14437cf385aaf1490 487 Pfam PF00171 Aldehyde dehydrogenase family 18 476 7.4E-167 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D172_019425 dadafa04a3d285a14437cf385aaf1490 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 D172_016185 0a864d077d43ad0c0431799727e5729e 133 Gene3D G3DSA:3.90.1030.10 1 117 6.8E-47 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_016185 0a864d077d43ad0c0431799727e5729e 133 SUPERFAMILY SSF64263 1 119 1.96E-50 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_016185 0a864d077d43ad0c0431799727e5729e 133 Pfam PF01196 Ribosomal protein L17 20 116 5.4E-33 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_016185 0a864d077d43ad0c0431799727e5729e 133 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 116 6.3E-48 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_016185 0a864d077d43ad0c0431799727e5729e 133 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.236 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_016185 0a864d077d43ad0c0431799727e5729e 133 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_005565 fcab634cba4b37157f6a821846ae25e5 392 Pfam PF00571 CBS domain 246 295 1.5E-4 T 14-10-2018 IPR000644 CBS domain D172_005565 fcab634cba4b37157f6a821846ae25e5 392 Gene3D G3DSA:3.10.580.10 156 309 2.9E-43 T 14-10-2018 D172_005565 fcab634cba4b37157f6a821846ae25e5 392 Pfam PF01595 Domain of unknown function DUF21 1 151 8.3E-40 T 14-10-2018 IPR002550 CNNM, transmembrane domain D172_005565 fcab634cba4b37157f6a821846ae25e5 392 SUPERFAMILY SSF54631 162 298 2.32E-25 T 14-10-2018 D172_005565 fcab634cba4b37157f6a821846ae25e5 392 Gene3D G3DSA:3.30.465.10 310 387 1.1E-26 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 D172_005565 fcab634cba4b37157f6a821846ae25e5 392 Pfam PF03471 Transporter associated domain 313 388 3.0E-17 T 14-10-2018 IPR005170 Transporter-associated domain D172_005565 fcab634cba4b37157f6a821846ae25e5 392 SMART SM01091 311 389 3.3E-23 T 14-10-2018 IPR005170 Transporter-associated domain D172_005565 fcab634cba4b37157f6a821846ae25e5 392 SUPERFAMILY SSF56176 309 389 3.82E-20 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D172_004650 6f95616d0f624380fafaee869407a908 861 SUPERFAMILY SSF52540 574 805 6.64E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_004650 6f95616d0f624380fafaee869407a908 861 Pfam PF05188 MutS domain II 135 261 2.0E-27 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 D172_004650 6f95616d0f624380fafaee869407a908 861 Gene3D G3DSA:1.10.1420.10 394 510 4.1E-101 T 14-10-2018 D172_004650 6f95616d0f624380fafaee869407a908 861 Pfam PF05190 MutS family domain IV 435 524 6.2E-30 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 D172_004650 6f95616d0f624380fafaee869407a908 861 Pfam PF05192 MutS domain III 277 566 1.5E-37 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 D172_004650 6f95616d0f624380fafaee869407a908 861 Pfam PF01624 MutS domain I 15 126 6.6E-43 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 D172_004650 6f95616d0f624380fafaee869407a908 861 SMART SM00533 291 598 6.3E-98 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 D172_004650 6f95616d0f624380fafaee869407a908 861 Pfam PF00488 MutS domain V 617 804 1.3E-85 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 D172_004650 6f95616d0f624380fafaee869407a908 861 SUPERFAMILY SSF53150 121 274 5.89E-40 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 D172_004650 6f95616d0f624380fafaee869407a908 861 SUPERFAMILY SSF48334 275 572 3.01E-88 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily D172_004650 6f95616d0f624380fafaee869407a908 861 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 15 858 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 D172_004650 6f95616d0f624380fafaee869407a908 861 Gene3D G3DSA:1.10.1420.10 274 566 4.1E-101 T 14-10-2018 D172_004650 6f95616d0f624380fafaee869407a908 861 Gene3D G3DSA:3.40.1170.10 7 128 2.9E-51 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 D172_004650 6f95616d0f624380fafaee869407a908 861 SUPERFAMILY SSF55271 8 122 2.62E-42 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 D172_004650 6f95616d0f624380fafaee869407a908 861 SMART SM00534 614 801 4.3E-118 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 D172_004650 6f95616d0f624380fafaee869407a908 861 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 14 853 24.867 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 D172_004650 6f95616d0f624380fafaee869407a908 861 PIRSF PIRSF037677 4 846 1.6E-156 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 D172_004650 6f95616d0f624380fafaee869407a908 861 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 695 711 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 D172_004650 6f95616d0f624380fafaee869407a908 861 Gene3D G3DSA:3.40.50.300 575 860 8.9E-103 T 14-10-2018 D172_004650 6f95616d0f624380fafaee869407a908 861 Gene3D G3DSA:3.30.420.110 134 270 2.2E-34 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 D172_005040 94a96c9b66da41189e795d1a458de411 357 Gene3D G3DSA:3.20.20.330 7 345 1.0E-121 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 D172_005040 94a96c9b66da41189e795d1a458de411 357 Pfam PF02574 Homocysteine S-methyltransferase 23 329 2.5E-76 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 D172_005040 94a96c9b66da41189e795d1a458de411 357 SUPERFAMILY SSF82282 14 357 1.02E-99 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 D172_012850 13d2439d263bffb21535287d5ce35b86 245 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 245 108.342 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 D172_012850 13d2439d263bffb21535287d5ce35b86 245 SUPERFAMILY SSF56300 6 243 7.42E-31 T 14-10-2018 D172_012850 13d2439d263bffb21535287d5ce35b86 245 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 5 233 1.6E-88 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 D172_012850 13d2439d263bffb21535287d5ce35b86 245 Pfam PF00149 Calcineurin-like phosphoesterase 5 203 2.2E-9 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D172_012850 13d2439d263bffb21535287d5ce35b86 245 Gene3D G3DSA:3.60.21.10 4 241 1.3E-17 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like D172_020755 2b842cee535e873afd5784992714fe65 302 SUPERFAMILY SSF48452 187 268 3.8E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_020755 2b842cee535e873afd5784992714fe65 302 SMART SM00028 235 268 4.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_020755 2b842cee535e873afd5784992714fe65 302 SMART SM00028 201 234 0.26 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_020755 2b842cee535e873afd5784992714fe65 302 Gene3D G3DSA:1.25.40.10 23 284 5.9E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_020755 2b842cee535e873afd5784992714fe65 302 Pfam PF14559 Tetratricopeptide repeat 187 241 1.6E-5 T 14-10-2018 D172_013310 bdb515fa96669ad15216577048611729 256 Gene3D G3DSA:3.40.50.300 1 255 9.0E-67 T 14-10-2018 D172_013310 bdb515fa96669ad15216577048611729 256 Pfam PF13614 AAA domain 2 179 3.6E-50 T 14-10-2018 IPR025669 AAA domain D172_013310 bdb515fa96669ad15216577048611729 256 SUPERFAMILY SSF52540 2 254 4.02E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_011005 9d6cfa951ae07e4da21157fbeea803c9 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 151 316 7.3E-54 T 14-10-2018 IPR000160 GGDEF domain D172_011005 9d6cfa951ae07e4da21157fbeea803c9 323 Gene3D G3DSA:3.30.70.270 145 319 4.3E-56 T 14-10-2018 D172_011005 9d6cfa951ae07e4da21157fbeea803c9 323 Gene3D G3DSA:3.30.450.20 7 142 4.1E-34 T 14-10-2018 D172_011005 9d6cfa951ae07e4da21157fbeea803c9 323 SMART SM00267 144 316 1.4E-59 T 14-10-2018 IPR000160 GGDEF domain D172_011005 9d6cfa951ae07e4da21157fbeea803c9 323 SUPERFAMILY SSF55785 12 86 2.66E-8 T 14-10-2018 IPR035965 PAS domain superfamily D172_011005 9d6cfa951ae07e4da21157fbeea803c9 323 SUPERFAMILY SSF55073 160 318 2.43E-49 T 14-10-2018 IPR029787 Nucleotide cyclase D172_011005 9d6cfa951ae07e4da21157fbeea803c9 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 156 312 7.1E-46 T 14-10-2018 IPR000160 GGDEF domain D172_015445 a079bd3b1d4dfcbf485e02b51f0e60c2 383 Pfam PF04773 FecR protein 57 158 3.0E-14 T 14-10-2018 IPR006860 FecR protein D172_003550 352ec8b211a6c63f7f60612fc8f68d34 123 SUPERFAMILY SSF52980 12 118 3.31E-19 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 D172_003550 352ec8b211a6c63f7f60612fc8f68d34 123 Pfam PF02021 Uncharacterised protein family UPF0102 19 108 1.7E-22 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 D172_003550 352ec8b211a6c63f7f60612fc8f68d34 123 Gene3D G3DSA:3.40.1350.10 18 123 1.0E-26 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 D172_003550 352ec8b211a6c63f7f60612fc8f68d34 123 Hamap MF_00048 UPF0102 protein YraN [yraN]. 11 121 20.275 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 D172_003550 352ec8b211a6c63f7f60612fc8f68d34 123 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 11 122 2.5E-21 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 D172_014750 b5e3897952774891cd2f191852a40b4f 294 Gene3D G3DSA:1.10.10.10 1 88 6.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_014750 b5e3897952774891cd2f191852a40b4f 294 Gene3D G3DSA:3.40.190.10 92 290 2.1E-44 T 14-10-2018 D172_014750 b5e3897952774891cd2f191852a40b4f 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 2.6E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_014750 b5e3897952774891cd2f191852a40b4f 294 Pfam PF03466 LysR substrate binding domain 94 292 4.8E-25 T 14-10-2018 IPR005119 LysR, substrate-binding D172_014750 b5e3897952774891cd2f191852a40b4f 294 SUPERFAMILY SSF46785 5 86 6.09E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_014750 b5e3897952774891cd2f191852a40b4f 294 SUPERFAMILY SSF53850 90 293 6.36E-41 T 14-10-2018 D172_014750 b5e3897952774891cd2f191852a40b4f 294 Gene3D G3DSA:3.40.190.10 171 266 2.1E-44 T 14-10-2018 D172_014750 b5e3897952774891cd2f191852a40b4f 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 5.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_014750 b5e3897952774891cd2f191852a40b4f 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 5.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_014750 b5e3897952774891cd2f191852a40b4f 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 5.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 Gene3D G3DSA:3.30.450.20 379 509 3.4E-24 T 14-10-2018 D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 SUPERFAMILY SSF52172 772 886 2.7E-30 T 14-10-2018 IPR011006 CheY-like superfamily D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 Pfam PF00989 PAS fold 383 504 6.2E-11 T 14-10-2018 IPR013767 PAS fold GO:0006355 D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 Pfam PF00072 Response regulator receiver domain 776 884 2.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 SUPERFAMILY SSF47384 515 596 5.1E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 SUPERFAMILY SSF55874 584 752 4.71E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 SMART SM00387 641 753 5.1E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 Gene3D G3DSA:3.30.565.10 594 757 1.4E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 SMART SM01079 81 270 2.1E-39 T 14-10-2018 IPR006189 CHASE domain D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 Pfam PF03924 CHASE domain 84 262 2.2E-36 T 14-10-2018 IPR006189 CHASE domain D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 383 517 8.0E-14 T 14-10-2018 IPR000014 PAS domain D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 SUPERFAMILY SSF55785 393 519 3.22E-14 T 14-10-2018 IPR035965 PAS domain superfamily D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 Pfam PF00512 His Kinase A (phospho-acceptor) domain 530 595 3.2E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 641 752 4.2E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 PRINTS PR00344 Bacterial sensor protein C-terminal signature 713 731 3.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 PRINTS PR00344 Bacterial sensor protein C-terminal signature 737 750 3.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 PRINTS PR00344 Bacterial sensor protein C-terminal signature 696 706 3.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 692 3.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 SMART SM00091 380 445 4.0E-10 T 14-10-2018 IPR000014 PAS domain D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 SMART SM00448 774 884 2.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 Gene3D G3DSA:1.10.287.130 510 593 3.3E-28 T 14-10-2018 D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 SMART SM00388 530 595 4.9E-25 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 Gene3D G3DSA:3.30.450.350 87 291 5.9E-22 T 14-10-2018 D172_006730 c7048b3d947627aaa5c4319c4e8334c4 893 Gene3D G3DSA:3.40.50.2300 763 892 1.4E-33 T 14-10-2018 D172_003310 99d7a782a8fe9534b585b021f9505d6e 419 Pfam PF12704 MacB-like periplasmic core domain 33 256 2.2E-30 T 14-10-2018 IPR025857 MacB-like periplasmic core domain D172_003310 99d7a782a8fe9534b585b021f9505d6e 419 Pfam PF02687 FtsX-like permease family 323 410 6.0E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 D172_004685 f29468aa91b764e11ebc11470e6566eb 276 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 275 41.089 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D172_004685 f29468aa91b764e11ebc11470e6566eb 276 Pfam PF01842 ACT domain 3 65 1.2E-6 T 14-10-2018 IPR002912 ACT domain D172_004685 f29468aa91b764e11ebc11470e6566eb 276 Gene3D G3DSA:3.40.50.170 82 276 9.5E-64 T 14-10-2018 D172_004685 f29468aa91b764e11ebc11470e6566eb 276 PIRSF PIRSF036480 1 276 6.6E-105 T 14-10-2018 D172_004685 f29468aa91b764e11ebc11470e6566eb 276 SUPERFAMILY SSF55021 1 65 1.92E-9 T 14-10-2018 D172_004685 f29468aa91b764e11ebc11470e6566eb 276 Pfam PF00551 Formyl transferase 81 257 3.2E-44 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D172_004685 f29468aa91b764e11ebc11470e6566eb 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 81 103 1.1E-46 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D172_004685 f29468aa91b764e11ebc11470e6566eb 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 37 49 1.1E-46 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D172_004685 f29468aa91b764e11ebc11470e6566eb 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 227 249 1.1E-46 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D172_004685 f29468aa91b764e11ebc11470e6566eb 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 5 31 1.1E-46 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D172_004685 f29468aa91b764e11ebc11470e6566eb 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 103 130 1.1E-46 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D172_004685 f29468aa91b764e11ebc11470e6566eb 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 249 274 1.1E-46 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D172_004685 f29468aa91b764e11ebc11470e6566eb 276 SUPERFAMILY SSF53328 81 276 6.28E-56 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D172_004685 f29468aa91b764e11ebc11470e6566eb 276 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 4 275 3.7E-102 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 D172_004685 f29468aa91b764e11ebc11470e6566eb 276 Gene3D G3DSA:3.30.70.260 1 81 7.3E-15 T 14-10-2018 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 Pfam PF01578 Cytochrome C assembly protein 89 297 1.3E-49 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 5.4E-51 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 5.4E-51 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 631 644 5.4E-51 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 5.4E-51 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 5.4E-51 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 5.4E-51 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 5.4E-51 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.3E-86 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.3E-86 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.3E-86 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.3E-86 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.3E-86 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.3E-86 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.3E-86 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.3E-86 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 641 2.9E-228 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013255 e0006d56c79931d9c9fa80ee19d33c0d 656 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 638 3.8E-114 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal D172_010130 a6abed517dd5d97a78b172c4ad15c3b9 206 Gene3D G3DSA:3.90.870.10 1 206 2.7E-65 T 14-10-2018 D172_010130 a6abed517dd5d97a78b172c4ad15c3b9 206 SUPERFAMILY SSF55821 1 204 2.23E-62 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily D172_010130 a6abed517dd5d97a78b172c4ad15c3b9 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 1.5E-66 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 D172_010130 a6abed517dd5d97a78b172c4ad15c3b9 206 Pfam PF01300 Telomere recombination 23 198 3.5E-43 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 D172_006025 75d8cc5d150dbedae7a95cc95aedef35 100 Pfam PF00816 H-NS histone family 16 92 1.4E-13 T 14-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 D172_006025 75d8cc5d150dbedae7a95cc95aedef35 100 SMART SM00528 59 100 1.5E-8 T 14-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 D172_006025 75d8cc5d150dbedae7a95cc95aedef35 100 Gene3D G3DSA:4.10.430.10 55 100 7.6E-8 T 14-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 D172_006025 75d8cc5d150dbedae7a95cc95aedef35 100 SUPERFAMILY SSF81273 61 98 7.45E-6 T 14-10-2018 D172_008265 faa7d5a1e6b4d2018a32cea318657fa7 637 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_008265 faa7d5a1e6b4d2018a32cea318657fa7 637 SMART SM00382 344 513 1.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_008265 faa7d5a1e6b4d2018a32cea318657fa7 637 SMART SM00382 28 230 4.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_008265 faa7d5a1e6b4d2018a32cea318657fa7 637 Gene3D G3DSA:1.10.287.380 555 637 6.0E-24 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 D172_008265 faa7d5a1e6b4d2018a32cea318657fa7 637 Pfam PF12848 ABC transporter 224 297 1.7E-11 T 14-10-2018 IPR032781 ABC-transporter extension domain D172_008265 faa7d5a1e6b4d2018a32cea318657fa7 637 Pfam PF16326 ABC transporter C-terminal domain 564 633 7.1E-18 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 D172_008265 faa7d5a1e6b4d2018a32cea318657fa7 637 SUPERFAMILY SSF52540 5 232 2.32E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_008265 faa7d5a1e6b4d2018a32cea318657fa7 637 Gene3D G3DSA:3.40.50.300 10 279 3.9E-66 T 14-10-2018 D172_008265 faa7d5a1e6b4d2018a32cea318657fa7 637 Gene3D G3DSA:3.40.50.300 281 552 4.0E-62 T 14-10-2018 D172_008265 faa7d5a1e6b4d2018a32cea318657fa7 637 Pfam PF00005 ABC transporter 20 185 4.2E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_008265 faa7d5a1e6b4d2018a32cea318657fa7 637 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_008265 faa7d5a1e6b4d2018a32cea318657fa7 637 SUPERFAMILY SSF52540 307 516 1.1E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_008265 faa7d5a1e6b4d2018a32cea318657fa7 637 Pfam PF00005 ABC transporter 337 469 3.0E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_015845 a136d6ca0e22cdff0fb98d0983349fa2 697 Gene3D G3DSA:3.30.1370.120 356 451 2.5E-24 T 14-10-2018 IPR038591 NolW-like superfamily D172_015845 a136d6ca0e22cdff0fb98d0983349fa2 697 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 287 694 1.9E-154 T 14-10-2018 IPR013355 Type IV pilus secretin PilQ D172_015845 a136d6ca0e22cdff0fb98d0983349fa2 697 Gene3D G3DSA:3.30.1370.130 295 352 5.8E-8 T 14-10-2018 D172_015845 a136d6ca0e22cdff0fb98d0983349fa2 697 Pfam PF00263 Bacterial type II and III secretion system protein 537 694 1.2E-46 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 D172_015845 a136d6ca0e22cdff0fb98d0983349fa2 697 Gene3D G3DSA:2.60.40.3470 153 273 2.1E-20 T 14-10-2018 D172_015845 a136d6ca0e22cdff0fb98d0983349fa2 697 SMART SM00965 312 360 6.7E-8 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 D172_015845 a136d6ca0e22cdff0fb98d0983349fa2 697 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 641 674 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 D172_015845 a136d6ca0e22cdff0fb98d0983349fa2 697 PRINTS PR00811 Bacterial general secretion pathway protein D signature 660 678 2.7E-19 T 14-10-2018 IPR001775 GspD/PilQ family D172_015845 a136d6ca0e22cdff0fb98d0983349fa2 697 PRINTS PR00811 Bacterial general secretion pathway protein D signature 450 460 2.7E-19 T 14-10-2018 IPR001775 GspD/PilQ family D172_015845 a136d6ca0e22cdff0fb98d0983349fa2 697 PRINTS PR00811 Bacterial general secretion pathway protein D signature 533 557 2.7E-19 T 14-10-2018 IPR001775 GspD/PilQ family D172_015845 a136d6ca0e22cdff0fb98d0983349fa2 697 PRINTS PR00811 Bacterial general secretion pathway protein D signature 683 697 2.7E-19 T 14-10-2018 IPR001775 GspD/PilQ family D172_015845 a136d6ca0e22cdff0fb98d0983349fa2 697 Pfam PF03958 Bacterial type II/III secretion system short domain 387 450 1.7E-11 T 14-10-2018 IPR005644 NolW-like D172_015870 e7fa9551954b8494234947206c792851 833 Pfam PF17092 Penicillin-binding protein OB-like domain 317 428 5.8E-27 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_015870 e7fa9551954b8494234947206c792851 833 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 766 8.0E-170 T 14-10-2018 D172_015870 e7fa9551954b8494234947206c792851 833 SUPERFAMILY SSF56601 211 815 1.4E-114 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D172_015870 e7fa9551954b8494234947206c792851 833 SUPERFAMILY SSF53955 43 255 5.91E-77 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily D172_015870 e7fa9551954b8494234947206c792851 833 Pfam PF00905 Penicillin binding protein transpeptidase domain 431 703 2.1E-25 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 D172_015870 e7fa9551954b8494234947206c792851 833 Gene3D G3DSA:1.10.3810.10 49 243 2.4E-77 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_015870 e7fa9551954b8494234947206c792851 833 Pfam PF00912 Transglycosylase 57 229 7.4E-63 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_015870 e7fa9551954b8494234947206c792851 833 Gene3D G3DSA:2.40.50.140 317 425 1.5E-30 T 14-10-2018 D172_003765 f9faf023345dfe5672139c0167dc778e 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 156 6.4E-21 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_003765 f9faf023345dfe5672139c0167dc778e 718 SUPERFAMILY SSF56935 37 718 8.32E-106 T 14-10-2018 D172_003765 f9faf023345dfe5672139c0167dc778e 718 Gene3D G3DSA:2.170.130.10 44 164 1.2E-22 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_003765 f9faf023345dfe5672139c0167dc778e 718 Pfam PF00593 TonB dependent receptor 266 717 3.9E-41 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_003765 f9faf023345dfe5672139c0167dc778e 718 Gene3D G3DSA:2.40.170.20 184 718 1.6E-84 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_003765 f9faf023345dfe5672139c0167dc778e 718 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 701 718 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site D172_007090 3a2192d590e7006397e7fdc6ecde8a61 483 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 244 260 1.9E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase D172_007090 3a2192d590e7006397e7fdc6ecde8a61 483 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 127 137 1.9E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase D172_007090 3a2192d590e7006397e7fdc6ecde8a61 483 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 298 315 1.9E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase D172_007090 3a2192d590e7006397e7fdc6ecde8a61 483 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 92 106 1.9E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase D172_007090 3a2192d590e7006397e7fdc6ecde8a61 483 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 194 206 1.9E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase D172_007090 3a2192d590e7006397e7fdc6ecde8a61 483 Gene3D G3DSA:3.40.50.150 2 315 6.6E-92 T 14-10-2018 D172_007090 3a2192d590e7006397e7fdc6ecde8a61 483 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 425 474 1.9E-11 T 14-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain D172_007090 3a2192d590e7006397e7fdc6ecde8a61 483 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 106 1.2E-24 T 14-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 D172_007090 3a2192d590e7006397e7fdc6ecde8a61 483 Pfam PF01189 16S rRNA methyltransferase RsmB/F 118 314 1.0E-48 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 D172_007090 3a2192d590e7006397e7fdc6ecde8a61 483 SUPERFAMILY SSF53335 7 315 3.44E-58 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_007090 3a2192d590e7006397e7fdc6ecde8a61 483 Gene3D G3DSA:2.30.130.90 316 482 2.4E-51 T 14-10-2018 D172_007090 3a2192d590e7006397e7fdc6ecde8a61 483 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 315 8.7E-90 T 14-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 D172_007090 3a2192d590e7006397e7fdc6ecde8a61 483 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 480 59.703 T 14-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 D172_000150 badbaed40d901e74e798f340fc5b1b20 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 687 25.826 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_000150 badbaed40d901e74e798f340fc5b1b20 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 550 6.6E-208 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_000150 badbaed40d901e74e798f340fc5b1b20 689 SUPERFAMILY SSF109604 338 489 2.83E-15 T 14-10-2018 D172_000150 badbaed40d901e74e798f340fc5b1b20 689 SMART SM00836 584 687 0.0033 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 D172_000150 badbaed40d901e74e798f340fc5b1b20 689 Pfam PF05746 DALR anticodon binding domain 581 674 1.6E-8 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 D172_000150 badbaed40d901e74e798f340fc5b1b20 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 688 1.8E-284 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_000150 badbaed40d901e74e798f340fc5b1b20 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 6.1E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_000150 badbaed40d901e74e798f340fc5b1b20 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 6.1E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_000150 badbaed40d901e74e798f340fc5b1b20 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 6.1E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_000150 badbaed40d901e74e798f340fc5b1b20 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 6.1E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_000150 badbaed40d901e74e798f340fc5b1b20 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 6.1E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_001150 f1c9bd0d67f20f8a914600a68ba7d679 356 Pfam PF00512 His Kinase A (phospho-acceptor) domain 139 195 5.9E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_001150 f1c9bd0d67f20f8a914600a68ba7d679 356 Gene3D G3DSA:1.10.287.130 121 197 6.8E-13 T 14-10-2018 D172_001150 f1c9bd0d67f20f8a914600a68ba7d679 356 SUPERFAMILY SSF55874 206 353 4.06E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_001150 f1c9bd0d67f20f8a914600a68ba7d679 356 Gene3D G3DSA:3.30.450.20 8 120 6.1E-12 T 14-10-2018 D172_001150 f1c9bd0d67f20f8a914600a68ba7d679 356 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 242 354 2.9E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_001150 f1c9bd0d67f20f8a914600a68ba7d679 356 Gene3D G3DSA:3.30.565.10 200 354 1.1E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_001150 f1c9bd0d67f20f8a914600a68ba7d679 356 SUPERFAMILY SSF47384 130 196 4.51E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_001150 f1c9bd0d67f20f8a914600a68ba7d679 356 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 89 1.7E-5 T 14-10-2018 IPR000014 PAS domain D172_001150 f1c9bd0d67f20f8a914600a68ba7d679 356 SMART SM00388 137 202 2.1E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_001150 f1c9bd0d67f20f8a914600a68ba7d679 356 SUPERFAMILY SSF55785 9 59 7.68E-5 T 14-10-2018 IPR035965 PAS domain superfamily D172_001150 f1c9bd0d67f20f8a914600a68ba7d679 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 335 8.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_001150 f1c9bd0d67f20f8a914600a68ba7d679 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 353 8.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_001150 f1c9bd0d67f20f8a914600a68ba7d679 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 302 8.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_001150 f1c9bd0d67f20f8a914600a68ba7d679 356 SMART SM00387 241 356 9.7E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_001100 e163207112542ce28d51b16e36b3ab2f 604 Pfam PF00667 FAD binding domain 237 429 5.7E-21 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 Gene3D G3DSA:3.40.50.80 450 604 3.0E-57 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D172_001100 e163207112542ce28d51b16e36b3ab2f 604 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 604 8.4E-245 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 SUPERFAMILY SSF52218 63 207 1.9E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_001100 e163207112542ce28d51b16e36b3ab2f 604 Pfam PF00258 Flavodoxin 67 194 1.1E-33 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 275 285 7.7E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 391 398 7.7E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 424 433 7.7E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 461 480 7.7E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 499 510 7.7E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 553 561 7.7E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 486 495 7.7E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 530 546 7.7E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 PRINTS PR00369 Flavodoxin signature 66 79 4.5E-14 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 PRINTS PR00369 Flavodoxin signature 114 125 4.5E-14 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 PRINTS PR00369 Flavodoxin signature 146 156 4.5E-14 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 PRINTS PR00369 Flavodoxin signature 170 189 4.5E-14 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 Gene3D G3DSA:1.20.990.10 285 389 4.5E-66 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 Gene3D G3DSA:3.40.50.360 56 218 1.1E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_001100 e163207112542ce28d51b16e36b3ab2f 604 Gene3D G3DSA:2.40.30.10 237 443 4.5E-66 T 14-10-2018 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 SUPERFAMILY SSF63380 234 451 1.68E-59 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D172_001100 e163207112542ce28d51b16e36b3ab2f 604 Pfam PF00175 Oxidoreductase NAD-binding domain 462 568 1.1E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D172_001100 e163207112542ce28d51b16e36b3ab2f 604 SUPERFAMILY SSF52343 449 604 8.38E-49 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D172_001100 e163207112542ce28d51b16e36b3ab2f 604 PIRSF PIRSF000207 1 604 8.1E-261 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_006110 88723464d93b1f00b9bb23e9ac04578f 526 Gene3D G3DSA:3.10.350.10 411 463 4.1E-16 T 14-10-2018 IPR036779 LysM domain superfamily D172_006110 88723464d93b1f00b9bb23e9ac04578f 526 Gene3D G3DSA:3.10.350.10 342 391 2.6E-14 T 14-10-2018 IPR036779 LysM domain superfamily D172_006110 88723464d93b1f00b9bb23e9ac04578f 526 SMART SM00257 415 459 2.6E-14 T 14-10-2018 IPR018392 LysM domain D172_006110 88723464d93b1f00b9bb23e9ac04578f 526 SMART SM00257 344 387 2.2E-13 T 14-10-2018 IPR018392 LysM domain D172_006110 88723464d93b1f00b9bb23e9ac04578f 526 SMART SM00257 476 520 2.9E-14 T 14-10-2018 IPR018392 LysM domain D172_006110 88723464d93b1f00b9bb23e9ac04578f 526 Pfam PF01464 Transglycosylase SLT domain 120 224 1.4E-22 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 D172_006110 88723464d93b1f00b9bb23e9ac04578f 526 SUPERFAMILY SSF54106 343 387 9.55E-10 T 14-10-2018 D172_006110 88723464d93b1f00b9bb23e9ac04578f 526 SUPERFAMILY SSF54106 474 520 2.35E-11 T 14-10-2018 D172_006110 88723464d93b1f00b9bb23e9ac04578f 526 SUPERFAMILY SSF54106 414 459 1.83E-11 T 14-10-2018 D172_006110 88723464d93b1f00b9bb23e9ac04578f 526 Gene3D G3DSA:3.10.350.10 464 526 5.6E-16 T 14-10-2018 IPR036779 LysM domain superfamily D172_006110 88723464d93b1f00b9bb23e9ac04578f 526 SUPERFAMILY SSF53955 111 263 6.19E-41 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily D172_006110 88723464d93b1f00b9bb23e9ac04578f 526 Pfam PF01476 LysM domain 345 387 1.9E-11 T 14-10-2018 IPR018392 LysM domain D172_006110 88723464d93b1f00b9bb23e9ac04578f 526 Pfam PF01476 LysM domain 477 519 1.1E-13 T 14-10-2018 IPR018392 LysM domain D172_006110 88723464d93b1f00b9bb23e9ac04578f 526 Pfam PF01476 LysM domain 416 458 9.4E-14 T 14-10-2018 IPR018392 LysM domain D172_006110 88723464d93b1f00b9bb23e9ac04578f 526 Gene3D G3DSA:1.10.530.10 108 262 5.9E-29 T 14-10-2018 D172_006110 88723464d93b1f00b9bb23e9ac04578f 526 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 133 161 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 D172_008365 bab93bc88ad7f04b5257431e31ce344c 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 286 1.2E-147 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D172_008365 bab93bc88ad7f04b5257431e31ce344c 290 Pfam PF02629 CoA binding domain 6 99 4.1E-33 T 14-10-2018 IPR003781 CoA-binding GO:0048037 D172_008365 bab93bc88ad7f04b5257431e31ce344c 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site D172_008365 bab93bc88ad7f04b5257431e31ce344c 290 PIRSF PIRSF001553 1 289 5.3E-137 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D172_008365 bab93bc88ad7f04b5257431e31ce344c 290 SMART SM00881 4 100 1.4E-38 T 14-10-2018 IPR003781 CoA-binding GO:0048037 D172_008365 bab93bc88ad7f04b5257431e31ce344c 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site D172_008365 bab93bc88ad7f04b5257431e31ce344c 290 Gene3D G3DSA:3.40.50.261 124 288 7.9E-77 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D172_008365 bab93bc88ad7f04b5257431e31ce344c 290 Gene3D G3DSA:3.40.50.720 1 123 4.7E-53 T 14-10-2018 D172_008365 bab93bc88ad7f04b5257431e31ce344c 290 SUPERFAMILY SSF52210 123 285 4.45E-57 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D172_008365 bab93bc88ad7f04b5257431e31ce344c 290 Pfam PF00549 CoA-ligase 151 271 6.5E-21 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D172_008365 bab93bc88ad7f04b5257431e31ce344c 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.868 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D172_008365 bab93bc88ad7f04b5257431e31ce344c 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 8.6E-42 T 14-10-2018 D172_008365 bab93bc88ad7f04b5257431e31ce344c 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 8.6E-42 T 14-10-2018 D172_008365 bab93bc88ad7f04b5257431e31ce344c 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 8.6E-42 T 14-10-2018 D172_008365 bab93bc88ad7f04b5257431e31ce344c 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 8.6E-42 T 14-10-2018 D172_008365 bab93bc88ad7f04b5257431e31ce344c 290 SUPERFAMILY SSF51735 1 122 3.94E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_003375 fd7541f78c0e9b95f048db0388882f03 730 Pfam PF00990 Diguanylate cyclase, GGDEF domain 314 460 1.8E-17 T 14-10-2018 IPR000160 GGDEF domain D172_003375 fd7541f78c0e9b95f048db0388882f03 730 Gene3D G3DSA:3.20.20.450 479 730 6.7E-90 T 14-10-2018 IPR035919 EAL domain superfamily D172_003375 fd7541f78c0e9b95f048db0388882f03 730 SMART SM00267 303 466 1.4E-7 T 14-10-2018 IPR000160 GGDEF domain D172_003375 fd7541f78c0e9b95f048db0388882f03 730 Pfam PF00563 EAL domain 482 715 2.4E-68 T 14-10-2018 IPR001633 EAL domain D172_003375 fd7541f78c0e9b95f048db0388882f03 730 Pfam PF00072 Response regulator receiver domain 28 145 4.0E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_003375 fd7541f78c0e9b95f048db0388882f03 730 SMART SM00052 476 720 7.1E-97 T 14-10-2018 IPR001633 EAL domain D172_003375 fd7541f78c0e9b95f048db0388882f03 730 Gene3D G3DSA:3.40.50.2300 27 174 1.0E-17 T 14-10-2018 D172_003375 fd7541f78c0e9b95f048db0388882f03 730 SMART SM00448 26 148 0.0021 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_003375 fd7541f78c0e9b95f048db0388882f03 730 SUPERFAMILY SSF55073 319 461 3.37E-18 T 14-10-2018 IPR029787 Nucleotide cyclase D172_003375 fd7541f78c0e9b95f048db0388882f03 730 Gene3D G3DSA:3.30.70.270 308 477 1.4E-25 T 14-10-2018 D172_003375 fd7541f78c0e9b95f048db0388882f03 730 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 312 461 1.3E-11 T 14-10-2018 IPR000160 GGDEF domain D172_003375 fd7541f78c0e9b95f048db0388882f03 730 SUPERFAMILY SSF141868 482 727 1.44E-82 T 14-10-2018 IPR035919 EAL domain superfamily D172_003375 fd7541f78c0e9b95f048db0388882f03 730 SUPERFAMILY SSF52172 27 181 9.96E-16 T 14-10-2018 IPR011006 CheY-like superfamily D172_003375 fd7541f78c0e9b95f048db0388882f03 730 Pfam PF11849 Domain of unknown function (DUF3369) 148 308 1.0E-30 T 14-10-2018 IPR021800 Domain of unknown function DUF3369 D172_009605 9d35483df046a9afd50f3500229e69f9 157 Pfam PF07308 Protein of unknown function (DUF1456) 85 151 1.2E-20 T 14-10-2018 IPR009921 Domain of unknown function DUF1456 D172_009605 9d35483df046a9afd50f3500229e69f9 157 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 6.9E-26 T 14-10-2018 IPR009921 Domain of unknown function DUF1456 D172_013305 7af94534d2a3fc9e9d5e4bf576be13dd 260 Gene3D G3DSA:2.30.30.40 121 243 5.8E-7 T 14-10-2018 D172_013305 7af94534d2a3fc9e9d5e4bf576be13dd 260 Pfam PF01584 CheW-like domain 118 248 7.6E-14 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D172_013305 7af94534d2a3fc9e9d5e4bf576be13dd 260 Gene3D G3DSA:2.40.50.180 135 248 5.8E-7 T 14-10-2018 D172_013305 7af94534d2a3fc9e9d5e4bf576be13dd 260 PIRSF PIRSF020479 4 88 2.7 T 14-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like D172_013305 7af94534d2a3fc9e9d5e4bf576be13dd 260 PIRSF PIRSF020479 24 260 1.5E-73 T 14-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like D172_013305 7af94534d2a3fc9e9d5e4bf576be13dd 260 SUPERFAMILY SSF50341 115 250 4.58E-16 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 D172_013305 7af94534d2a3fc9e9d5e4bf576be13dd 260 SMART SM00260 114 249 2.9E-5 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D172_005060 94c03f1b403768fe9164864deb4cc1ef 210 Gene3D G3DSA:3.40.1400.10 1 209 2.1E-91 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 D172_005060 94c03f1b403768fe9164864deb4cc1ef 210 Pfam PF12408 Ribose-5-phosphate isomerase 165 207 1.7E-19 T 14-10-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal D172_005060 94c03f1b403768fe9164864deb4cc1ef 210 Pfam PF02502 Ribose/Galactose Isomerase 3 139 1.9E-29 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 D172_005060 94c03f1b403768fe9164864deb4cc1ef 210 SUPERFAMILY SSF89623 1 160 2.88E-37 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 Pfam PF00512 His Kinase A (phospho-acceptor) domain 393 456 1.2E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 SMART SM00388 392 457 1.1E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 504 619 3.6E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 SMART SM00387 504 620 1.5E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 SUPERFAMILY SSF55874 446 620 1.44E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 Gene3D G3DSA:3.30.565.10 457 624 1.7E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 Pfam PF01627 Hpt domain 927 967 4.4E-6 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 SUPERFAMILY SSF52172 762 880 1.71E-35 T 14-10-2018 IPR011006 CheY-like superfamily D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 Pfam PF00072 Response regulator receiver domain 767 874 1.8E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 Gene3D G3DSA:1.10.287.130 353 455 1.8E-27 T 14-10-2018 D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 SMART SM00448 764 875 2.9E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 SMART SM01358 40 278 4.3E-4 T 14-10-2018 IPR032255 Helical bimodular sensor domain D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 SUPERFAMILY SSF47226 858 972 9.94E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 559 7.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 598 7.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 573 7.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 617 7.1E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 Gene3D G3DSA:1.20.120.160 886 997 3.8E-14 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 Gene3D G3DSA:3.40.50.2300 759 879 1.6E-37 T 14-10-2018 D172_001780 c2b8b62835cab88f188c42aa8e58d47a 1074 SUPERFAMILY SSF47384 377 458 1.49E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_014315 ff587b669ade6e62c7fc85ee2960fd28 1028 Gene3D G3DSA:2.130.10.10 74 162 2.1E-15 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_014315 ff587b669ade6e62c7fc85ee2960fd28 1028 Gene3D G3DSA:2.130.10.10 20 73 3.7E-14 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_014315 ff587b669ade6e62c7fc85ee2960fd28 1028 SUPERFAMILY SSF63829 19 236 1.11E-5 T 14-10-2018 D172_014315 ff587b669ade6e62c7fc85ee2960fd28 1028 Pfam PF07494 Two component regulator propeller 78 99 0.003 T 14-10-2018 IPR011110 Two component regulator propeller D172_014315 ff587b669ade6e62c7fc85ee2960fd28 1028 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 815 988 2.4E-27 T 14-10-2018 IPR000160 GGDEF domain D172_014315 ff587b669ade6e62c7fc85ee2960fd28 1028 SUPERFAMILY SSF55073 822 989 1.18E-30 T 14-10-2018 IPR029787 Nucleotide cyclase D172_014315 ff587b669ade6e62c7fc85ee2960fd28 1028 Gene3D G3DSA:3.30.70.270 802 991 2.7E-37 T 14-10-2018 D172_014315 ff587b669ade6e62c7fc85ee2960fd28 1028 Gene3D G3DSA:2.130.10.10 415 632 1.1E-16 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_014315 ff587b669ade6e62c7fc85ee2960fd28 1028 SUPERFAMILY SSF63825 161 408 9.68E-10 T 14-10-2018 D172_014315 ff587b669ade6e62c7fc85ee2960fd28 1028 SMART SM00267 806 991 2.5E-29 T 14-10-2018 IPR000160 GGDEF domain D172_014315 ff587b669ade6e62c7fc85ee2960fd28 1028 Gene3D G3DSA:2.60.40.10 640 760 3.9E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_014315 ff587b669ade6e62c7fc85ee2960fd28 1028 Pfam PF07495 Y_Y_Y domain 684 748 2.9E-12 T 14-10-2018 IPR011123 Two component regulator three Y D172_014315 ff587b669ade6e62c7fc85ee2960fd28 1028 SUPERFAMILY SSF50952 314 566 2.22E-6 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 D172_014315 ff587b669ade6e62c7fc85ee2960fd28 1028 Gene3D G3DSA:2.130.10.10 171 414 9.5E-21 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_014315 ff587b669ade6e62c7fc85ee2960fd28 1028 Pfam PF00990 Diguanylate cyclase, GGDEF domain 818 985 2.7E-30 T 14-10-2018 IPR000160 GGDEF domain D172_018595 c5bea8b8fbd61ec6f0afb6455b8b458b 184 Pfam PF00857 Isochorismatase family 12 161 8.1E-29 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 D172_018595 c5bea8b8fbd61ec6f0afb6455b8b458b 184 SUPERFAMILY SSF52499 3 184 6.41E-47 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 D172_018595 c5bea8b8fbd61ec6f0afb6455b8b458b 184 Gene3D G3DSA:3.40.50.850 1 184 3.9E-52 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 D172_003620 f21a44fa3e9b3e680aa13e48f68eb470 399 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 9.2E-79 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_003620 f21a44fa3e9b3e680aa13e48f68eb470 399 Gene3D G3DSA:3.40.50.620 4 216 3.2E-72 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_003620 f21a44fa3e9b3e680aa13e48f68eb470 399 SUPERFAMILY SSF52374 7 315 4.16E-97 T 14-10-2018 D172_003620 f21a44fa3e9b3e680aa13e48f68eb470 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 1.3E-23 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 D172_003620 f21a44fa3e9b3e680aa13e48f68eb470 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 210 222 1.3E-23 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 D172_003620 f21a44fa3e9b3e680aa13e48f68eb470 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 1.3E-23 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 D172_003620 f21a44fa3e9b3e680aa13e48f68eb470 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 177 199 1.3E-23 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 D172_003620 f21a44fa3e9b3e680aa13e48f68eb470 399 SMART SM00363 336 397 0.0016 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_003620 f21a44fa3e9b3e680aa13e48f68eb470 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 8 398 3.5E-121 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 D172_003620 f21a44fa3e9b3e680aa13e48f68eb470 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_003620 f21a44fa3e9b3e680aa13e48f68eb470 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 1 398 48.377 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 D172_003620 f21a44fa3e9b3e680aa13e48f68eb470 399 SUPERFAMILY SSF55174 320 398 2.75E-15 T 14-10-2018 D172_003620 f21a44fa3e9b3e680aa13e48f68eb470 399 Gene3D G3DSA:1.10.240.10 217 325 1.6E-34 T 14-10-2018 D172_003620 f21a44fa3e9b3e680aa13e48f68eb470 399 Gene3D G3DSA:3.10.290.10 326 398 1.2E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D172_011590 7e2d3d5fe58c539fe9f786de114264b9 636 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 565 615 4.7E-10 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 D172_011590 7e2d3d5fe58c539fe9f786de114264b9 636 SUPERFAMILY SSF55904 490 626 9.02E-30 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 D172_011590 7e2d3d5fe58c539fe9f786de114264b9 636 Gene3D G3DSA:3.40.640.10 142 425 2.9E-86 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_011590 7e2d3d5fe58c539fe9f786de114264b9 636 Gene3D G3DSA:3.90.105.10 571 627 1.9E-18 T 14-10-2018 D172_011590 7e2d3d5fe58c539fe9f786de114264b9 636 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 364 378 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 D172_011590 7e2d3d5fe58c539fe9f786de114264b9 636 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 142 520 3.2E-87 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 D172_011590 7e2d3d5fe58c539fe9f786de114264b9 636 SUPERFAMILY SSF53383 142 531 2.48E-78 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_007765 43372fe9b9a55293c6a01686068fecfb 245 SUPERFAMILY SSF46785 17 86 2.61E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_007765 43372fe9b9a55293c6a01686068fecfb 245 Gene3D G3DSA:1.20.120.530 109 244 6.4E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_007765 43372fe9b9a55293c6a01686068fecfb 245 Gene3D G3DSA:1.10.10.10 14 90 7.6E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_007765 43372fe9b9a55293c6a01686068fecfb 245 Pfam PF07729 FCD domain 111 231 5.7E-23 T 14-10-2018 IPR011711 GntR, C-terminal D172_007765 43372fe9b9a55293c6a01686068fecfb 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 82 8.9E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_007765 43372fe9b9a55293c6a01686068fecfb 245 SMART SM00345 23 82 3.3E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_007765 43372fe9b9a55293c6a01686068fecfb 245 SMART SM00895 111 233 9.6E-22 T 14-10-2018 IPR011711 GntR, C-terminal D172_007765 43372fe9b9a55293c6a01686068fecfb 245 SUPERFAMILY SSF48008 109 234 9.42E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_011820 ef4f7a3d62e90a8fa886de60b6e8069d 286 Gene3D G3DSA:2.40.30.170 167 286 5.0E-27 T 14-10-2018 D172_011820 ef4f7a3d62e90a8fa886de60b6e8069d 286 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 234 3.8E-38 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D172_011820 ef4f7a3d62e90a8fa886de60b6e8069d 286 Gene3D G3DSA:2.40.50.100 43 112 8.8E-9 T 14-10-2018 D172_011820 ef4f7a3d62e90a8fa886de60b6e8069d 286 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 231 1.8E-15 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D172_011820 ef4f7a3d62e90a8fa886de60b6e8069d 286 SUPERFAMILY SSF111369 42 203 3.79E-26 T 14-10-2018 D172_006130 d47f5fee8c5444773e24576ab028fe77 237 SUPERFAMILY SSF53098 3 178 8.32E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_006130 d47f5fee8c5444773e24576ab028fe77 237 SMART SM00479 4 177 1.5E-46 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D172_006130 d47f5fee8c5444773e24576ab028fe77 237 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 4 235 2.6E-96 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_006130 d47f5fee8c5444773e24576ab028fe77 237 Gene3D G3DSA:3.30.420.10 1 183 6.1E-58 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_006130 d47f5fee8c5444773e24576ab028fe77 237 Pfam PF00929 Exonuclease 6 168 1.2E-40 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D172_006130 d47f5fee8c5444773e24576ab028fe77 237 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 217 1.3E-71 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_000415 f4b922dc8037fcece9c02bd048c4a000 606 Pfam PF01380 SIS domain 459 588 5.3E-28 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D172_000415 f4b922dc8037fcece9c02bd048c4a000 606 Pfam PF01380 SIS domain 290 417 3.7E-32 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D172_000415 f4b922dc8037fcece9c02bd048c4a000 606 Gene3D G3DSA:3.40.50.10490 249 605 5.0E-150 T 14-10-2018 D172_000415 f4b922dc8037fcece9c02bd048c4a000 606 Gene3D G3DSA:3.60.20.10 2 241 5.7E-77 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_000415 f4b922dc8037fcece9c02bd048c4a000 606 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 606 5.2E-256 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 D172_000415 f4b922dc8037fcece9c02bd048c4a000 606 Pfam PF13522 Glutamine amidotransferase domain 63 181 6.0E-21 T 14-10-2018 D172_000415 f4b922dc8037fcece9c02bd048c4a000 606 SUPERFAMILY SSF53697 246 606 1.76E-112 T 14-10-2018 D172_000415 f4b922dc8037fcece9c02bd048c4a000 606 Gene3D G3DSA:3.40.50.10490 444 591 5.0E-150 T 14-10-2018 D172_000415 f4b922dc8037fcece9c02bd048c4a000 606 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 606 39.904 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 D172_000415 f4b922dc8037fcece9c02bd048c4a000 606 SUPERFAMILY SSF56235 2 234 2.06E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_015025 ae55677b3ad00256e55c6abd17c45682 359 Gene3D G3DSA:3.30.70.100 200 293 3.4E-19 T 14-10-2018 D172_015025 ae55677b3ad00256e55c6abd17c45682 359 SUPERFAMILY SSF82689 201 296 7.06E-20 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 D172_015025 ae55677b3ad00256e55c6abd17c45682 359 SUPERFAMILY SSF50182 133 199 4.25E-15 T 14-10-2018 IPR010920 LSM domain superfamily D172_015025 ae55677b3ad00256e55c6abd17c45682 359 Gene3D G3DSA:2.30.30.60 149 198 1.7E-10 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily D172_015025 ae55677b3ad00256e55c6abd17c45682 359 Pfam PF00924 Mechanosensitive ion channel 91 290 4.6E-40 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 D172_005575 8ae39fcb411a3d4420b4ed8ef70cd476 458 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D172_005575 8ae39fcb411a3d4420b4ed8ef70cd476 458 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 2.6E-76 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D172_005575 8ae39fcb411a3d4420b4ed8ef70cd476 458 Gene3D G3DSA:1.10.260.30 328 451 1.3E-43 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 D172_005575 8ae39fcb411a3d4420b4ed8ef70cd476 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 440 34.23 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 D172_005575 8ae39fcb411a3d4420b4ed8ef70cd476 458 Gene3D G3DSA:3.40.50.300 90 285 2.5E-123 T 14-10-2018 D172_005575 8ae39fcb411a3d4420b4ed8ef70cd476 458 Pfam PF02978 Signal peptide binding domain 329 427 5.7E-33 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 D172_005575 8ae39fcb411a3d4420b4ed8ef70cd476 458 SUPERFAMILY SSF47446 329 431 2.13E-37 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 D172_005575 8ae39fcb411a3d4420b4ed8ef70cd476 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.0E-19 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D172_005575 8ae39fcb411a3d4420b4ed8ef70cd476 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 4.5E-176 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 D172_005575 8ae39fcb411a3d4420b4ed8ef70cd476 458 SMART SM00382 99 247 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_005575 8ae39fcb411a3d4420b4ed8ef70cd476 458 SMART SM00963 1 86 1.5E-33 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D172_005575 8ae39fcb411a3d4420b4ed8ef70cd476 458 SUPERFAMILY SSF52540 42 353 2.87E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_005575 8ae39fcb411a3d4420b4ed8ef70cd476 458 Gene3D G3DSA:1.20.120.140 4 305 2.5E-123 T 14-10-2018 D172_005575 8ae39fcb411a3d4420b4ed8ef70cd476 458 SMART SM00962 100 296 5.0E-119 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D172_009305 4b9cfa414a7ce2dbeeb5f8d9f885c963 342 SUPERFAMILY SSF51735 1 339 6.05E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_009305 4b9cfa414a7ce2dbeeb5f8d9f885c963 342 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 265 2.1E-54 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 D172_009305 4b9cfa414a7ce2dbeeb5f8d9f885c963 342 Gene3D G3DSA:3.90.25.10 195 332 1.7E-134 T 14-10-2018 D172_009305 4b9cfa414a7ce2dbeeb5f8d9f885c963 342 PRINTS PR01713 Nucleotide sugar epimerase signature 232 247 1.3E-5 T 14-10-2018 D172_009305 4b9cfa414a7ce2dbeeb5f8d9f885c963 342 PRINTS PR01713 Nucleotide sugar epimerase signature 259 274 1.3E-5 T 14-10-2018 D172_009305 4b9cfa414a7ce2dbeeb5f8d9f885c963 342 PRINTS PR01713 Nucleotide sugar epimerase signature 298 315 1.3E-5 T 14-10-2018 D172_009305 4b9cfa414a7ce2dbeeb5f8d9f885c963 342 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 338 3.0E-130 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 D172_009305 4b9cfa414a7ce2dbeeb5f8d9f885c963 342 Gene3D G3DSA:3.40.50.720 4 277 1.7E-134 T 14-10-2018 D172_019045 28664b5b7478ae581199e09c42e6273f 454 Pfam PF00158 Sigma-54 interaction domain 148 314 7.6E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D172_019045 28664b5b7478ae581199e09c42e6273f 454 Gene3D G3DSA:1.10.8.60 319 383 5.1E-20 T 14-10-2018 D172_019045 28664b5b7478ae581199e09c42e6273f 454 Gene3D G3DSA:3.40.50.300 139 318 3.7E-57 T 14-10-2018 D172_019045 28664b5b7478ae581199e09c42e6273f 454 Gene3D G3DSA:1.10.10.60 395 449 1.6E-11 T 14-10-2018 D172_019045 28664b5b7478ae581199e09c42e6273f 454 SMART SM00448 8 118 1.9E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_019045 28664b5b7478ae581199e09c42e6273f 454 SUPERFAMILY SSF52172 9 192 9.39E-40 T 14-10-2018 IPR011006 CheY-like superfamily D172_019045 28664b5b7478ae581199e09c42e6273f 454 Gene3D G3DSA:3.40.50.2300 7 138 8.6E-35 T 14-10-2018 D172_019045 28664b5b7478ae581199e09c42e6273f 454 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site D172_019045 28664b5b7478ae581199e09c42e6273f 454 SUPERFAMILY SSF52540 148 378 6.1E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_019045 28664b5b7478ae581199e09c42e6273f 454 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D172_019045 28664b5b7478ae581199e09c42e6273f 454 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 172 185 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D172_019045 28664b5b7478ae581199e09c42e6273f 454 Pfam PF00072 Response regulator receiver domain 10 114 2.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_019045 28664b5b7478ae581199e09c42e6273f 454 SMART SM00382 168 311 8.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_019045 28664b5b7478ae581199e09c42e6273f 454 SUPERFAMILY SSF46689 359 447 1.3E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_019045 28664b5b7478ae581199e09c42e6273f 454 Pfam PF02954 Bacterial regulatory protein, Fis family 409 445 1.8E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_008110 13de912f7db9cd5b28173164edd2c7de 366 Gene3D G3DSA:2.40.30.10 283 366 1.7E-28 T 14-10-2018 D172_008110 13de912f7db9cd5b28173164edd2c7de 366 Gene3D G3DSA:3.40.50.620 1 213 8.7E-95 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_008110 13de912f7db9cd5b28173164edd2c7de 366 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 362 40.117 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 D172_008110 13de912f7db9cd5b28173164edd2c7de 366 Gene3D G3DSA:2.30.30.280 214 282 2.6E-26 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 D172_008110 13de912f7db9cd5b28173164edd2c7de 366 Pfam PF03054 tRNA methyl transferase 8 361 4.0E-142 T 14-10-2018 D172_008110 13de912f7db9cd5b28173164edd2c7de 366 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 8 361 1.7E-151 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 D172_008110 13de912f7db9cd5b28173164edd2c7de 366 SUPERFAMILY SSF52402 6 296 1.01E-54 T 14-10-2018 D172_010300 6d2f206537834b639161a48b23059706 347 Gene3D G3DSA:3.10.20.30 259 347 4.3E-10 T 14-10-2018 IPR012675 Beta-grasp domain superfamily D172_010300 6d2f206537834b639161a48b23059706 347 PRINTS PR00409 Phthalate dioxygenase reductase family signature 225 233 1.8E-7 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 D172_010300 6d2f206537834b639161a48b23059706 347 PRINTS PR00409 Phthalate dioxygenase reductase family signature 126 140 1.8E-7 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 D172_010300 6d2f206537834b639161a48b23059706 347 PRINTS PR00409 Phthalate dioxygenase reductase family signature 148 167 1.8E-7 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 D172_010300 6d2f206537834b639161a48b23059706 347 Gene3D G3DSA:2.40.30.10 34 139 5.3E-12 T 14-10-2018 D172_010300 6d2f206537834b639161a48b23059706 347 Gene3D G3DSA:3.40.50.80 142 257 1.4E-20 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D172_010300 6d2f206537834b639161a48b23059706 347 SUPERFAMILY SSF52343 131 246 1.28E-22 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D172_010300 6d2f206537834b639161a48b23059706 347 Pfam PF00175 Oxidoreductase NAD-binding domain 149 239 7.9E-9 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D172_010300 6d2f206537834b639161a48b23059706 347 SUPERFAMILY SSF63380 29 141 5.22E-16 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D172_010300 6d2f206537834b639161a48b23059706 347 SUPERFAMILY SSF54292 248 346 1.48E-12 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D172_010300 6d2f206537834b639161a48b23059706 347 Pfam PF00970 Oxidoreductase FAD-binding domain 54 139 2.0E-10 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 D172_002405 b161376c66b79e5d06dde106e9f46fae 323 Pfam PF00348 Polyprenyl synthetase 32 271 7.8E-75 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 D172_002405 b161376c66b79e5d06dde106e9f46fae 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site D172_002405 b161376c66b79e5d06dde106e9f46fae 323 SUPERFAMILY SSF48576 5 322 7.2E-98 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily D172_002405 b161376c66b79e5d06dde106e9f46fae 323 Gene3D G3DSA:1.10.600.10 1 323 7.1E-112 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily D172_002405 b161376c66b79e5d06dde106e9f46fae 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site D172_013090 a432999e845ab39268e01c029a8fbbe1 451 Pfam PF00209 Sodium:neurotransmitter symporter family 150 449 7.0E-23 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D172_013090 a432999e845ab39268e01c029a8fbbe1 451 Pfam PF00209 Sodium:neurotransmitter symporter family 5 139 8.5E-21 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D172_013090 a432999e845ab39268e01c029a8fbbe1 451 SUPERFAMILY SSF161070 5 449 4.18E-114 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 D172_013090 a432999e845ab39268e01c029a8fbbe1 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 2.2E-8 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D172_013090 a432999e845ab39268e01c029a8fbbe1 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 2.2E-8 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D172_013090 a432999e845ab39268e01c029a8fbbe1 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 324 344 2.2E-8 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D172_001650 2aceb8eb04dab554a314dc901593071e 491 SUPERFAMILY SSF64153 6 242 5.75E-57 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 D172_001650 2aceb8eb04dab554a314dc901593071e 491 Gene3D G3DSA:3.40.1190.20 227 491 1.3E-85 T 14-10-2018 IPR029056 Ribokinase-like D172_001650 2aceb8eb04dab554a314dc901593071e 491 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 221 488 23.82 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 D172_001650 2aceb8eb04dab554a314dc901593071e 491 PIRSF PIRSF017184 4 491 1.3E-131 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 D172_001650 2aceb8eb04dab554a314dc901593071e 491 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 227 488 7.8E-74 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 D172_001650 2aceb8eb04dab554a314dc901593071e 491 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 8 207 22.08 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 D172_001650 2aceb8eb04dab554a314dc901593071e 491 SUPERFAMILY SSF53613 229 489 2.95E-72 T 14-10-2018 IPR029056 Ribokinase-like D172_001650 2aceb8eb04dab554a314dc901593071e 491 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 19 206 1.3E-42 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 D172_001650 2aceb8eb04dab554a314dc901593071e 491 Pfam PF01256 Carbohydrate kinase 245 482 7.8E-64 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 D172_001650 2aceb8eb04dab554a314dc901593071e 491 Pfam PF03853 YjeF-related protein N-terminus 29 186 8.6E-40 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 D172_001650 2aceb8eb04dab554a314dc901593071e 491 Gene3D G3DSA:3.40.50.10260 3 211 5.4E-57 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 D172_001650 2aceb8eb04dab554a314dc901593071e 491 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 427 437 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site D172_013445 de75b4c0f43e7caecac7628b35db2e79 370 SUPERFAMILY SSF55874 199 363 2.23E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_013445 de75b4c0f43e7caecac7628b35db2e79 370 SUPERFAMILY SSF47384 137 209 1.29E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_013445 de75b4c0f43e7caecac7628b35db2e79 370 Gene3D G3DSA:3.30.565.10 211 368 3.0E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_013445 de75b4c0f43e7caecac7628b35db2e79 370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 359 4.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013445 de75b4c0f43e7caecac7628b35db2e79 370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 321 4.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013445 de75b4c0f43e7caecac7628b35db2e79 370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 293 307 4.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013445 de75b4c0f43e7caecac7628b35db2e79 370 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 340 4.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013445 de75b4c0f43e7caecac7628b35db2e79 370 Gene3D G3DSA:1.10.287.130 129 208 3.8E-10 T 14-10-2018 D172_013445 de75b4c0f43e7caecac7628b35db2e79 370 SUPERFAMILY SSF55785 32 112 4.89E-7 T 14-10-2018 IPR035965 PAS domain superfamily D172_013445 de75b4c0f43e7caecac7628b35db2e79 370 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 254 359 8.3E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_013445 de75b4c0f43e7caecac7628b35db2e79 370 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 209 6.2E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_013445 de75b4c0f43e7caecac7628b35db2e79 370 SMART SM00388 144 210 1.8E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_013445 de75b4c0f43e7caecac7628b35db2e79 370 SMART SM00387 253 362 3.0E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_012105 fd08dc19c5119e0f8d5688bacc943deb 275 Gene3D G3DSA:1.10.10.60 175 225 1.3E-7 T 14-10-2018 D172_012105 fd08dc19c5119e0f8d5688bacc943deb 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 268 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D172_012105 fd08dc19c5119e0f8d5688bacc943deb 275 Pfam PF12833 Helix-turn-helix domain 197 273 5.3E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_012105 fd08dc19c5119e0f8d5688bacc943deb 275 SUPERFAMILY SSF51215 30 158 1.7E-18 T 14-10-2018 IPR037923 Transcription regulator HTH-like D172_012105 fd08dc19c5119e0f8d5688bacc943deb 275 SUPERFAMILY SSF46689 226 273 5.38E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_012105 fd08dc19c5119e0f8d5688bacc943deb 275 SMART SM00342 192 272 1.7E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_012105 fd08dc19c5119e0f8d5688bacc943deb 275 Pfam PF02311 AraC-like ligand binding domain 29 151 1.4E-15 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 D172_012105 fd08dc19c5119e0f8d5688bacc943deb 275 SUPERFAMILY SSF46689 174 224 6.72E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_012105 fd08dc19c5119e0f8d5688bacc943deb 275 Gene3D G3DSA:1.10.10.60 226 275 8.0E-13 T 14-10-2018 D172_012105 fd08dc19c5119e0f8d5688bacc943deb 275 Gene3D G3DSA:2.60.120.10 19 102 6.3E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_012105 fd08dc19c5119e0f8d5688bacc943deb 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 5.6E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D172_012105 fd08dc19c5119e0f8d5688bacc943deb 275 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 5.6E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D172_015855 1f84d2b6d2e8c2fbf909b543135feeeb 201 Pfam PF04350 Pilus assembly protein, PilO 59 197 3.2E-50 T 14-10-2018 IPR007445 Pilus assembly protein, PilO D172_015855 1f84d2b6d2e8c2fbf909b543135feeeb 201 Gene3D G3DSA:3.30.70.60 101 201 2.0E-34 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 D172_015855 1f84d2b6d2e8c2fbf909b543135feeeb 201 PIRSF PIRSF016482 5 200 5.7E-56 T 14-10-2018 IPR007445 Pilus assembly protein, PilO D172_015855 1f84d2b6d2e8c2fbf909b543135feeeb 201 Gene3D G3DSA:1.10.287.540 64 100 2.5E-7 T 14-10-2018 D172_008725 bdbcb4e3d83d1bc6782be04f68cb0ab0 194 SUPERFAMILY SSF144091 11 190 3.53E-25 T 14-10-2018 D172_008725 bdbcb4e3d83d1bc6782be04f68cb0ab0 194 Pfam PF01694 Rhomboid family 41 185 3.4E-10 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 D172_008725 bdbcb4e3d83d1bc6782be04f68cb0ab0 194 Gene3D G3DSA:1.20.1540.10 5 185 1.0E-12 T 14-10-2018 IPR035952 Rhomboid-like superfamily D172_008725 bdbcb4e3d83d1bc6782be04f68cb0ab0 194 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 31 182 2.0E-48 T 14-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 PRINTS PR00344 Bacterial sensor protein C-terminal signature 777 787 4.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 PRINTS PR00344 Bacterial sensor protein C-terminal signature 794 812 4.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 PRINTS PR00344 Bacterial sensor protein C-terminal signature 818 831 4.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 PRINTS PR00344 Bacterial sensor protein C-terminal signature 759 773 4.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 Gene3D G3DSA:1.10.287.130 597 672 1.7E-24 T 14-10-2018 D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 Pfam PF03924 CHASE domain 67 195 1.6E-17 T 14-10-2018 IPR006189 CHASE domain D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 SUPERFAMILY SSF47384 592 673 2.75E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 Gene3D G3DSA:3.40.50.2300 844 967 1.5E-7 T 14-10-2018 D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 720 831 4.8E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 SUPERFAMILY SSF55785 302 407 1.87E-10 T 14-10-2018 IPR035965 PAS domain superfamily D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 Gene3D G3DSA:3.30.450.20 291 405 8.8E-15 T 14-10-2018 D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 SMART SM00065 440 592 3.8E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 Gene3D G3DSA:3.30.450.40 414 596 3.5E-14 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 Gene3D G3DSA:3.40.50.12330 985 1053 6.9E-20 T 14-10-2018 D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 Pfam PF00072 Response regulator receiver domain 996 1111 5.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 SUPERFAMILY SSF52172 991 1118 4.27E-35 T 14-10-2018 IPR011006 CheY-like superfamily D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 SMART SM01079 51 225 1.9E-43 T 14-10-2018 IPR006189 CHASE domain D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 SMART SM00388 607 672 1.5E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 Pfam PF00512 His Kinase A (phospho-acceptor) domain 607 672 9.3E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 Gene3D G3DSA:3.30.565.10 673 835 7.4E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 SUPERFAMILY SSF55781 446 594 3.43E-14 T 14-10-2018 D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 SUPERFAMILY SSF52172 848 965 1.57E-9 T 14-10-2018 IPR011006 CheY-like superfamily D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 Gene3D G3DSA:3.40.50.2300 1054 1120 2.2E-17 T 14-10-2018 D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 SMART SM00387 719 834 1.2E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 SMART SM00448 994 1113 1.3E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_000660 e42fcc51e83998a86d0cbb34be37113c 1120 SUPERFAMILY SSF55874 661 832 8.77E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_013480 93a22d0a7690e70d2632233742bd2279 494 Gene3D G3DSA:1.20.58.1830 5 493 1.0E-148 T 14-10-2018 D172_013480 93a22d0a7690e70d2632233742bd2279 494 Gene3D G3DSA:2.30.220.10 192 281 1.0E-148 T 14-10-2018 D172_013480 93a22d0a7690e70d2632233742bd2279 494 Gene3D G3DSA:2.170.280.10 178 401 1.0E-148 T 14-10-2018 D172_013480 93a22d0a7690e70d2632233742bd2279 494 Pfam PF07196 Flagellin hook IN motif 212 252 1.6E-7 T 14-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 D172_013480 93a22d0a7690e70d2632233742bd2279 494 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.7E-43 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 D172_013480 93a22d0a7690e70d2632233742bd2279 494 Gene3D G3DSA:1.20.1330.10 45 453 1.0E-148 T 14-10-2018 D172_013480 93a22d0a7690e70d2632233742bd2279 494 SUPERFAMILY SSF64518 2 493 1.7E-111 T 14-10-2018 D172_013480 93a22d0a7690e70d2632233742bd2279 494 Pfam PF00700 Bacterial flagellin C-terminal helical region 409 493 1.1E-29 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 D172_013480 93a22d0a7690e70d2632233742bd2279 494 PRINTS PR00207 Flagellin signature 37 54 6.8E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 D172_013480 93a22d0a7690e70d2632233742bd2279 494 PRINTS PR00207 Flagellin signature 76 95 6.8E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 D172_013480 93a22d0a7690e70d2632233742bd2279 494 PRINTS PR00207 Flagellin signature 111 134 6.8E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 D172_013845 370424feca74dd0492ee6df6cf55a430 345 Pfam PF16537 Type II secretion system protein B 281 339 5.1E-23 T 14-10-2018 IPR032389 Type II secretion system protein B D172_009800 006038eefe0b09ba51d00a3ef7f0b597 275 Pfam PF00072 Response regulator receiver domain 6 113 8.0E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_009800 006038eefe0b09ba51d00a3ef7f0b597 275 SUPERFAMILY SSF52172 3 146 5.69E-29 T 14-10-2018 IPR011006 CheY-like superfamily D172_009800 006038eefe0b09ba51d00a3ef7f0b597 275 SMART SM00850 166 263 5.5E-32 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 D172_009800 006038eefe0b09ba51d00a3ef7f0b597 275 Gene3D G3DSA:3.40.50.2300 1 134 6.2E-27 T 14-10-2018 D172_009800 006038eefe0b09ba51d00a3ef7f0b597 275 Gene3D G3DSA:2.40.50.1020 155 267 9.7E-15 T 14-10-2018 D172_009800 006038eefe0b09ba51d00a3ef7f0b597 275 SMART SM00448 3 113 2.5E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_009800 006038eefe0b09ba51d00a3ef7f0b597 275 Pfam PF04397 LytTr DNA-binding domain 169 262 2.7E-24 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 Pfam PF03129 Anticodon binding domain 541 630 5.4E-22 T 14-10-2018 IPR004154 Anticodon-binding D172_009585 a509d0e099cc11c9470c508bc5babfae 636 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.074 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 1.8E-14 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 SUPERFAMILY SSF55186 63 241 7.46E-66 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 Gene3D G3DSA:3.40.50.800 532 636 1.4E-30 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily D172_009585 a509d0e099cc11c9470c508bc5babfae 636 Gene3D G3DSA:3.30.930.10 223 531 1.4E-128 T 14-10-2018 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 SMART SM00863 170 219 7.9E-20 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 Pfam PF02824 TGS domain 4 61 7.3E-10 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 Gene3D G3DSA:3.30.980.10 69 222 6.6E-64 T 14-10-2018 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 SUPERFAMILY SSF81271 3 61 3.14E-14 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 Gene3D G3DSA:3.30.54.20 130 187 6.6E-64 T 14-10-2018 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 1.6E-239 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 SUPERFAMILY SSF55681 243 525 6.77E-97 T 14-10-2018 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 SUPERFAMILY SSF52954 529 635 4.23E-32 T 14-10-2018 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 Gene3D G3DSA:3.10.20.30 3 62 1.8E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily D172_009585 a509d0e099cc11c9470c508bc5babfae 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 9.1E-55 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 9.1E-55 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 9.1E-55 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 9.1E-55 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 9.1E-55 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 D172_009585 a509d0e099cc11c9470c508bc5babfae 636 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 529 1.0E-50 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_011950 acbe8d345af0019749138e8a3940c974 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 D172_011950 acbe8d345af0019749138e8a3940c974 315 Gene3D G3DSA:3.40.50.2020 7 302 1.4E-137 T 14-10-2018 D172_011950 acbe8d345af0019749138e8a3940c974 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.3E-30 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 D172_011950 acbe8d345af0019749138e8a3940c974 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 3.9E-50 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 D172_011950 acbe8d345af0019749138e8a3940c974 315 Gene3D G3DSA:3.40.50.2020 148 290 1.4E-137 T 14-10-2018 D172_011950 acbe8d345af0019749138e8a3940c974 315 SMART SM01400 4 121 3.0E-79 T 14-10-2018 D172_011950 acbe8d345af0019749138e8a3940c974 315 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 50.651 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 D172_011950 acbe8d345af0019749138e8a3940c974 315 SUPERFAMILY SSF53271 69 306 4.3E-68 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like D172_011950 acbe8d345af0019749138e8a3940c974 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 2.2E-127 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 D172_001600 8a5bcdaa10052ecbe60aa42b0e8b1a17 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 6.9E-63 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001600 8a5bcdaa10052ecbe60aa42b0e8b1a17 142 SMART SM00649 9 141 6.0E-82 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 D172_001600 8a5bcdaa10052ecbe60aa42b0e8b1a17 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 2.6E-28 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal D172_001600 8a5bcdaa10052ecbe60aa42b0e8b1a17 142 SUPERFAMILY SSF46906 68 141 6.93E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily D172_001600 8a5bcdaa10052ecbe60aa42b0e8b1a17 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.715 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 D172_001600 8a5bcdaa10052ecbe60aa42b0e8b1a17 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 4.0E-17 T 14-10-2018 D172_001600 8a5bcdaa10052ecbe60aa42b0e8b1a17 142 Gene3D G3DSA:3.30.1550.10 2 72 4.9E-34 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily D172_001600 8a5bcdaa10052ecbe60aa42b0e8b1a17 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.1E-23 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 D172_001600 8a5bcdaa10052ecbe60aa42b0e8b1a17 142 Gene3D G3DSA:1.10.10.250 73 141 1.5E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily D172_001600 8a5bcdaa10052ecbe60aa42b0e8b1a17 142 SUPERFAMILY SSF54747 3 73 2.22E-29 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily D172_014145 76a6bc9ac7a3231388c8e1eff17ca0b9 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 1.6E-32 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D172_014145 76a6bc9ac7a3231388c8e1eff17ca0b9 341 SUPERFAMILY SSF51735 141 305 4.08E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_014145 76a6bc9ac7a3231388c8e1eff17ca0b9 341 SMART SM00829 12 338 1.1E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D172_014145 76a6bc9ac7a3231388c8e1eff17ca0b9 341 Gene3D G3DSA:3.90.180.10 20 328 1.4E-118 T 14-10-2018 D172_014145 76a6bc9ac7a3231388c8e1eff17ca0b9 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 1.0E-27 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D172_014145 76a6bc9ac7a3231388c8e1eff17ca0b9 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.791 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 D172_014145 76a6bc9ac7a3231388c8e1eff17ca0b9 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 1.3E-175 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 D172_014145 76a6bc9ac7a3231388c8e1eff17ca0b9 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 D172_014145 76a6bc9ac7a3231388c8e1eff17ca0b9 341 SUPERFAMILY SSF50129 1 173 4.87E-54 T 14-10-2018 IPR011032 GroES-like superfamily D172_014145 76a6bc9ac7a3231388c8e1eff17ca0b9 341 Gene3D G3DSA:3.40.50.720 153 286 1.4E-118 T 14-10-2018 D172_017800 1a87d9370855be2a61c47e1183f7a684 779 Gene3D G3DSA:3.30.365.10 151 403 6.6E-271 T 14-10-2018 D172_017800 1a87d9370855be2a61c47e1183f7a684 779 Gene3D G3DSA:3.30.365.10 185 279 6.6E-271 T 14-10-2018 D172_017800 1a87d9370855be2a61c47e1183f7a684 779 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 31 135 4.5E-20 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead D172_017800 1a87d9370855be2a61c47e1183f7a684 779 Gene3D G3DSA:3.30.365.10 138 765 6.6E-271 T 14-10-2018 D172_017800 1a87d9370855be2a61c47e1183f7a684 779 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 16 768 0.0 T 14-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 D172_017800 1a87d9370855be2a61c47e1183f7a684 779 SMART SM01008 30 137 7.5E-32 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead D172_017800 1a87d9370855be2a61c47e1183f7a684 779 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 158 699 1.0E-190 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 D172_017800 1a87d9370855be2a61c47e1183f7a684 779 SUPERFAMILY SSF54665 10 137 4.71E-35 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily D172_017800 1a87d9370855be2a61c47e1183f7a684 779 SUPERFAMILY SSF56003 138 768 8.11E-194 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 D172_017800 1a87d9370855be2a61c47e1183f7a684 779 Gene3D G3DSA:3.30.365.10 455 601 6.6E-271 T 14-10-2018 D172_017800 1a87d9370855be2a61c47e1183f7a684 779 Gene3D G3DSA:3.90.1170.50 16 137 6.6E-271 T 14-10-2018 D172_016690 b421f67400ce3b147dbe3c3cb7c8b9cf 199 Pfam PF00694 Aconitase C-terminal domain 6 121 8.2E-31 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 D172_016690 b421f67400ce3b147dbe3c3cb7c8b9cf 199 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 37.564 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 D172_016690 b421f67400ce3b147dbe3c3cb7c8b9cf 199 SUPERFAMILY SSF52016 5 190 6.28E-52 T 14-10-2018 D172_016690 b421f67400ce3b147dbe3c3cb7c8b9cf 199 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 5 182 1.3E-68 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 D172_016690 b421f67400ce3b147dbe3c3cb7c8b9cf 199 Gene3D G3DSA:3.20.19.10 2 173 3.2E-68 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 D172_018980 c8cd5fed3bf5931dd05109dcf63ce578 725 Gene3D G3DSA:2.60.120.260 25 146 1.1E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_018980 c8cd5fed3bf5931dd05109dcf63ce578 725 Pfam PF00754 F5/8 type C domain 173 281 4.2E-19 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain D172_018980 c8cd5fed3bf5931dd05109dcf63ce578 725 Pfam PF00754 F5/8 type C domain 340 447 4.4E-18 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain D172_018980 c8cd5fed3bf5931dd05109dcf63ce578 725 SUPERFAMILY SSF49899 502 725 9.5E-112 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D172_018980 c8cd5fed3bf5931dd05109dcf63ce578 725 SMART SM00231 327 464 0.014 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain D172_018980 c8cd5fed3bf5931dd05109dcf63ce578 725 SMART SM00231 163 301 0.006 T 14-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain D172_018980 c8cd5fed3bf5931dd05109dcf63ce578 725 SUPERFAMILY SSF49785 170 301 1.56E-24 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_018980 c8cd5fed3bf5931dd05109dcf63ce578 725 SUPERFAMILY SSF49785 334 464 1.42E-20 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_018980 c8cd5fed3bf5931dd05109dcf63ce578 725 Gene3D G3DSA:2.60.120.200 501 725 1.9E-105 T 14-10-2018 D172_018980 c8cd5fed3bf5931dd05109dcf63ce578 725 Gene3D G3DSA:2.60.120.260 325 466 1.4E-25 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_018980 c8cd5fed3bf5931dd05109dcf63ce578 725 Gene3D G3DSA:2.60.120.260 166 307 3.2E-28 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_018980 c8cd5fed3bf5931dd05109dcf63ce578 725 Pfam PF08787 Alginate lyase 523 709 2.3E-25 T 14-10-2018 IPR014895 Alginate lyase 2 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 Pfam PF00873 AcrB/AcrD/AcrF family 3 1013 6.3E-166 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 SUPERFAMILY SSF82866 293 491 4.05E-35 T 14-10-2018 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 SUPERFAMILY SSF82693 41 135 4.71E-22 T 14-10-2018 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 Gene3D G3DSA:3.30.70.1430 558 656 1.2E-255 T 14-10-2018 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 SUPERFAMILY SSF82714 711 791 1.83E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 SUPERFAMILY SSF82693 137 325 7.85E-20 T 14-10-2018 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 Gene3D G3DSA:1.20.1640.10 10 506 1.2E-255 T 14-10-2018 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 Gene3D G3DSA:3.30.2090.10 708 798 1.2E-255 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 Gene3D G3DSA:1.20.1640.10 507 1010 1.2E-255 T 14-10-2018 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 Gene3D G3DSA:3.30.70.1320 136 328 1.2E-255 T 14-10-2018 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 Gene3D G3DSA:3.30.70.1430 40 806 1.2E-255 T 14-10-2018 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 Gene3D G3DSA:3.30.2090.10 179 271 1.2E-255 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 Gene3D G3DSA:3.30.70.1440 657 858 1.2E-255 T 14-10-2018 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 5.1E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 5.1E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 5.1E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.1E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 5.1E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.1E-28 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 SUPERFAMILY SSF82866 797 1016 1.83E-47 T 14-10-2018 D172_019540 7bb1d54f5a53daff0e4fe4ed026304b2 1022 SUPERFAMILY SSF82714 184 266 1.22E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_009740 e5e2f11998eb0cda2a8a38969a8e78d1 592 SUPERFAMILY SSF90123 15 336 1.83E-60 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D172_009740 e5e2f11998eb0cda2a8a38969a8e78d1 592 Gene3D G3DSA:3.40.50.300 344 592 1.8E-93 T 14-10-2018 D172_009740 e5e2f11998eb0cda2a8a38969a8e78d1 592 SMART SM00382 379 565 1.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_009740 e5e2f11998eb0cda2a8a38969a8e78d1 592 Pfam PF00005 ABC transporter 370 519 1.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_009740 e5e2f11998eb0cda2a8a38969a8e78d1 592 Gene3D G3DSA:1.20.1560.10 23 343 3.4E-112 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D172_009740 e5e2f11998eb0cda2a8a38969a8e78d1 592 SUPERFAMILY SSF52540 347 589 1.59E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_009740 e5e2f11998eb0cda2a8a38969a8e78d1 592 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_009740 e5e2f11998eb0cda2a8a38969a8e78d1 592 Pfam PF00664 ABC transporter transmembrane region 34 308 1.9E-39 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D172_011895 505797c9ea7a1dc72363bf902d311767 298 SUPERFAMILY SSF46785 3 83 8.06E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_011895 505797c9ea7a1dc72363bf902d311767 298 SUPERFAMILY SSF53850 91 295 2.17E-36 T 14-10-2018 D172_011895 505797c9ea7a1dc72363bf902d311767 298 Gene3D G3DSA:1.10.10.10 7 93 1.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_011895 505797c9ea7a1dc72363bf902d311767 298 Gene3D G3DSA:3.40.190.10 103 288 4.6E-62 T 14-10-2018 D172_011895 505797c9ea7a1dc72363bf902d311767 298 Gene3D G3DSA:3.40.190.10 163 261 4.6E-62 T 14-10-2018 D172_011895 505797c9ea7a1dc72363bf902d311767 298 Pfam PF03466 LysR substrate binding domain 90 289 1.1E-34 T 14-10-2018 IPR005119 LysR, substrate-binding D172_011895 505797c9ea7a1dc72363bf902d311767 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 4.5E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_011895 505797c9ea7a1dc72363bf902d311767 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.0E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_011895 505797c9ea7a1dc72363bf902d311767 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.0E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_011895 505797c9ea7a1dc72363bf902d311767 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.0E-11 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_012680 60c4e19f6895ebfc49f033b6265b555d 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 107 2.9E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D172_012680 60c4e19f6895ebfc49f033b6265b555d 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 2.9E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D172_012680 60c4e19f6895ebfc49f033b6265b555d 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 2.9E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D172_012680 60c4e19f6895ebfc49f033b6265b555d 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 2.9E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D172_012680 60c4e19f6895ebfc49f033b6265b555d 261 Gene3D G3DSA:3.90.230.10 1 259 4.9E-115 T 14-10-2018 D172_012680 60c4e19f6895ebfc49f033b6265b555d 261 Pfam PF00557 Metallopeptidase family M24 12 241 1.6E-54 T 14-10-2018 IPR000994 Peptidase M24 D172_012680 60c4e19f6895ebfc49f033b6265b555d 261 Hamap MF_01974 Methionine aminopeptidase [map]. 3 250 42.624 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 D172_012680 60c4e19f6895ebfc49f033b6265b555d 261 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 249 1.4E-102 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 D172_012680 60c4e19f6895ebfc49f033b6265b555d 261 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 D172_012680 60c4e19f6895ebfc49f033b6265b555d 261 SUPERFAMILY SSF55920 4 255 9.68E-94 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like D172_008715 c1d8fab27a71465e7bae160eaa7693e5 387 Gene3D G3DSA:3.60.10.10 24 387 2.7E-26 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D172_008715 c1d8fab27a71465e7bae160eaa7693e5 387 SUPERFAMILY SSF56219 24 384 4.46E-27 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D172_008715 c1d8fab27a71465e7bae160eaa7693e5 387 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 29 377 1.6E-27 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase D172_001160 8cc657fd9b8a5fc0b7ebf043fa0571df 468 Gene3D G3DSA:3.10.20.70 2 103 1.3E-39 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 D172_001160 8cc657fd9b8a5fc0b7ebf043fa0571df 468 Gene3D G3DSA:3.30.590.10 104 456 2.7E-146 T 14-10-2018 D172_001160 8cc657fd9b8a5fc0b7ebf043fa0571df 468 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 467 2.8E-206 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 D172_001160 8cc657fd9b8a5fc0b7ebf043fa0571df 468 SUPERFAMILY SSF55931 101 467 1.08E-134 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 D172_001160 8cc657fd9b8a5fc0b7ebf043fa0571df 468 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 13 94 4.1E-31 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 D172_001160 8cc657fd9b8a5fc0b7ebf043fa0571df 468 SUPERFAMILY SSF54368 3 98 2.22E-36 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 D172_001160 8cc657fd9b8a5fc0b7ebf043fa0571df 468 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 385 397 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 D172_001160 8cc657fd9b8a5fc0b7ebf043fa0571df 468 ProSitePatterns PS00180 Glutamine synthetase signature 1. 49 67 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 D172_001160 8cc657fd9b8a5fc0b7ebf043fa0571df 468 SMART SM01230 101 378 6.7E-145 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 D172_001160 8cc657fd9b8a5fc0b7ebf043fa0571df 468 Pfam PF00120 Glutamine synthetase, catalytic domain 101 465 3.4E-136 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 D172_001160 8cc657fd9b8a5fc0b7ebf043fa0571df 468 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 258 273 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 D172_009945 b6fa363faa69b2ab999f4a180ebb97f9 717 SUPERFAMILY SSF75138 230 351 7.06E-29 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily D172_009945 b6fa363faa69b2ab999f4a180ebb97f9 717 SUPERFAMILY SSF52540 1 240 2.87E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_009945 b6fa363faa69b2ab999f4a180ebb97f9 717 Pfam PF13500 AAA domain 3 230 1.3E-36 T 14-10-2018 D172_009945 b6fa363faa69b2ab999f4a180ebb97f9 717 Pfam PF01515 Phosphate acetyl/butaryl transferase 392 707 2.4E-123 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 D172_009945 b6fa363faa69b2ab999f4a180ebb97f9 717 Gene3D G3DSA:3.40.1390.20 224 364 8.6E-21 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily D172_009945 b6fa363faa69b2ab999f4a180ebb97f9 717 Gene3D G3DSA:3.40.50.300 3 213 1.0E-14 T 14-10-2018 D172_009945 b6fa363faa69b2ab999f4a180ebb97f9 717 Pfam PF07085 DRTGG domain 234 345 4.2E-31 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 D172_009945 b6fa363faa69b2ab999f4a180ebb97f9 717 Gene3D G3DSA:3.40.50.10950 398 710 1.2E-132 T 14-10-2018 D172_009945 b6fa363faa69b2ab999f4a180ebb97f9 717 PIRSF PIRSF006107 1 715 0.0 T 14-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 D172_009945 b6fa363faa69b2ab999f4a180ebb97f9 717 Gene3D G3DSA:3.40.50.10750 530 683 1.2E-132 T 14-10-2018 D172_009945 b6fa363faa69b2ab999f4a180ebb97f9 717 SUPERFAMILY SSF53659 394 711 6.58E-92 T 14-10-2018 D172_009945 b6fa363faa69b2ab999f4a180ebb97f9 717 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 407 707 3.7E-132 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 222 335 3.1E-9 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 Gene3D G3DSA:3.40.50.300 553 769 2.2E-65 T 14-10-2018 D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 Gene3D G3DSA:1.10.1780.10 1 161 9.1E-41 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 3.4E-32 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 3.4E-32 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 3.4E-32 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 3.4E-32 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 SMART SM00382 217 363 4.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 SMART SM00382 600 771 2.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 24 75 5.6E-4 T 14-10-2018 IPR004176 Clp, N-terminal D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 Gene3D G3DSA:3.40.50.300 166 361 1.7E-61 T 14-10-2018 D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 SUPERFAMILY SSF81923 11 129 8.11E-18 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 Gene3D G3DSA:1.10.8.60 772 867 8.9E-12 T 14-10-2018 D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 Gene3D G3DSA:3.40.50.300 363 547 2.1E-44 T 14-10-2018 D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 SUPERFAMILY SSF52540 178 508 1.78E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 SMART SM01086 772 864 3.7E-12 T 14-10-2018 IPR019489 Clp ATPase, C-terminal D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 854 0.0 T 14-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 772 846 3.0E-12 T 14-10-2018 IPR019489 Clp ATPase, C-terminal D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 313 325 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 SUPERFAMILY SSF52540 549 844 5.19E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_017595 c6bcbebe829772d6421636d3ac0a324a 867 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 767 2.2E-40 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D172_015960 0af7ca0d9573f69ce68ffd7fd18608c4 235 Gene3D G3DSA:1.10.10.10 1 69 1.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_015960 0af7ca0d9573f69ce68ffd7fd18608c4 235 SUPERFAMILY SSF46785 3 72 4.02E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_015960 0af7ca0d9573f69ce68ffd7fd18608c4 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 1.1E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_015960 0af7ca0d9573f69ce68ffd7fd18608c4 235 SMART SM00866 89 226 3.7E-25 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 D172_015960 0af7ca0d9573f69ce68ffd7fd18608c4 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 3.1E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_015960 0af7ca0d9573f69ce68ffd7fd18608c4 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 3.1E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_015960 0af7ca0d9573f69ce68ffd7fd18608c4 235 Pfam PF07702 UTRA domain 90 226 2.5E-26 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 D172_015960 0af7ca0d9573f69ce68ffd7fd18608c4 235 SMART SM00345 9 68 9.6E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_015960 0af7ca0d9573f69ce68ffd7fd18608c4 235 Gene3D G3DSA:3.40.1410.10 88 222 3.4E-26 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily D172_015960 0af7ca0d9573f69ce68ffd7fd18608c4 235 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 232 3.8E-87 T 14-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 D172_015960 0af7ca0d9573f69ce68ffd7fd18608c4 235 SUPERFAMILY SSF64288 56 231 8.32E-35 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily D172_014060 a057515cc16180327bb0ab87884225a0 294 Gene3D G3DSA:1.10.10.10 1 92 1.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_014060 a057515cc16180327bb0ab87884225a0 294 Pfam PF03466 LysR substrate binding domain 102 289 1.9E-14 T 14-10-2018 IPR005119 LysR, substrate-binding D172_014060 a057515cc16180327bb0ab87884225a0 294 Gene3D G3DSA:3.40.190.10 94 273 4.8E-13 T 14-10-2018 D172_014060 a057515cc16180327bb0ab87884225a0 294 SUPERFAMILY SSF46785 3 80 5.73E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_014060 a057515cc16180327bb0ab87884225a0 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.7E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_014060 a057515cc16180327bb0ab87884225a0 294 Gene3D G3DSA:3.40.190.10 159 263 4.8E-13 T 14-10-2018 D172_014060 a057515cc16180327bb0ab87884225a0 294 SUPERFAMILY SSF53850 106 288 6.38E-13 T 14-10-2018 D172_013785 d7bc8faa06e222a22965f502aec722da 303 Gene3D G3DSA:3.30.70.1630 98 148 4.0E-28 T 14-10-2018 D172_013785 d7bc8faa06e222a22965f502aec722da 303 Gene3D G3DSA:3.30.70.1400 11 97 4.0E-28 T 14-10-2018 D172_013785 d7bc8faa06e222a22965f502aec722da 303 SUPERFAMILY SSF103025 5 218 2.04E-45 T 14-10-2018 D172_013785 d7bc8faa06e222a22965f502aec722da 303 Pfam PF01571 Aminomethyltransferase folate-binding domain 14 143 4.8E-6 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain D172_013785 d7bc8faa06e222a22965f502aec722da 303 SUPERFAMILY SSF101790 219 301 3.86E-16 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal D172_013785 d7bc8faa06e222a22965f502aec722da 303 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 164 227 3.0E-26 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site D172_013785 d7bc8faa06e222a22965f502aec722da 303 Gene3D G3DSA:2.40.30.160 172 293 1.1E-34 T 14-10-2018 D172_002860 587b210da174ee032c4d63064957cbcd 147 Gene3D G3DSA:3.10.129.10 1 147 1.8E-49 T 14-10-2018 D172_002860 587b210da174ee032c4d63064957cbcd 147 Pfam PF03061 Thioesterase superfamily 49 134 1.1E-13 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 D172_002860 587b210da174ee032c4d63064957cbcd 147 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 16 145 2.0E-13 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 D172_002860 587b210da174ee032c4d63064957cbcd 147 SUPERFAMILY SSF54637 4 146 8.0E-23 T 14-10-2018 IPR029069 HotDog domain superfamily D172_013990 49460b7a184d7e52ae5665b62f271548 627 SUPERFAMILY SSF55073 226 364 1.65E-11 T 14-10-2018 IPR029787 Nucleotide cyclase D172_013990 49460b7a184d7e52ae5665b62f271548 627 Pfam PF00563 EAL domain 385 613 7.4E-55 T 14-10-2018 IPR001633 EAL domain D172_013990 49460b7a184d7e52ae5665b62f271548 627 SMART SM00052 379 618 2.2E-34 T 14-10-2018 IPR001633 EAL domain D172_013990 49460b7a184d7e52ae5665b62f271548 627 Gene3D G3DSA:3.20.20.450 380 622 2.2E-59 T 14-10-2018 IPR035919 EAL domain superfamily D172_013990 49460b7a184d7e52ae5665b62f271548 627 SUPERFAMILY SSF141868 385 616 7.19E-57 T 14-10-2018 IPR035919 EAL domain superfamily D172_013990 49460b7a184d7e52ae5665b62f271548 627 Gene3D G3DSA:3.30.70.270 216 379 3.9E-11 T 14-10-2018 D172_013990 49460b7a184d7e52ae5665b62f271548 627 SMART SM00267 209 366 5.2E-4 T 14-10-2018 IPR000160 GGDEF domain D172_013990 49460b7a184d7e52ae5665b62f271548 627 Pfam PF00990 Diguanylate cyclase, GGDEF domain 221 359 1.5E-6 T 14-10-2018 IPR000160 GGDEF domain D172_013730 764553640bb42d99483f1ce8c7bb4105 310 SUPERFAMILY SSF52540 21 215 1.46E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_013730 764553640bb42d99483f1ce8c7bb4105 310 TIGRFAM TIGR00436 era: GTP-binding protein Era 19 290 3.8E-107 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_013730 764553640bb42d99483f1ce8c7bb4105 310 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 20 175 7.5E-34 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D172_013730 764553640bb42d99483f1ce8c7bb4105 310 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 89 107 9.3E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_013730 764553640bb42d99483f1ce8c7bb4105 310 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 21 41 9.3E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_013730 764553640bb42d99483f1ce8c7bb4105 310 Gene3D G3DSA:3.30.300.20 196 310 3.2E-43 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta D172_013730 764553640bb42d99483f1ce8c7bb4105 310 SUPERFAMILY SSF54814 192 307 5.23E-43 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 D172_013730 764553640bb42d99483f1ce8c7bb4105 310 Pfam PF07650 KH domain 219 295 1.1E-18 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_013730 764553640bb42d99483f1ce8c7bb4105 310 Hamap MF_00367 GTPase Era [era]. 16 307 34.823 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_013730 764553640bb42d99483f1ce8c7bb4105 310 Gene3D G3DSA:3.40.50.300 15 194 2.7E-48 T 14-10-2018 D172_013730 764553640bb42d99483f1ce8c7bb4105 310 Pfam PF01926 50S ribosome-binding GTPase 21 135 2.0E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_015180 f51f91d12aa168472d8ebd8391082e72 771 SUPERFAMILY SSF141868 527 768 1.16E-74 T 14-10-2018 IPR035919 EAL domain superfamily D172_015180 f51f91d12aa168472d8ebd8391082e72 771 Pfam PF00563 EAL domain 519 754 1.2E-60 T 14-10-2018 IPR001633 EAL domain D172_015180 f51f91d12aa168472d8ebd8391082e72 771 SUPERFAMILY SSF158472 289 337 2.62E-6 T 14-10-2018 D172_015180 f51f91d12aa168472d8ebd8391082e72 771 SMART SM00304 287 340 5.9E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_015180 f51f91d12aa168472d8ebd8391082e72 771 Gene3D G3DSA:3.20.20.450 514 769 3.4E-79 T 14-10-2018 IPR035919 EAL domain superfamily D172_015180 f51f91d12aa168472d8ebd8391082e72 771 SMART SM00267 335 502 6.7E-22 T 14-10-2018 IPR000160 GGDEF domain D172_015180 f51f91d12aa168472d8ebd8391082e72 771 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 344 484 2.0E-20 T 14-10-2018 IPR000160 GGDEF domain D172_015180 f51f91d12aa168472d8ebd8391082e72 771 SMART SM00052 512 759 7.8E-82 T 14-10-2018 IPR001633 EAL domain D172_015180 f51f91d12aa168472d8ebd8391082e72 771 Pfam PF14827 Double sensory domain of two-component sensor kinase 41 200 1.6E-11 T 14-10-2018 IPR029150 Double Cache domain 3 D172_015180 f51f91d12aa168472d8ebd8391082e72 771 Gene3D G3DSA:1.20.1480.50 251 342 1.5E-10 T 14-10-2018 D172_015180 f51f91d12aa168472d8ebd8391082e72 771 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 492 4.7E-26 T 14-10-2018 IPR000160 GGDEF domain D172_015180 f51f91d12aa168472d8ebd8391082e72 771 SUPERFAMILY SSF55073 351 495 1.88E-26 T 14-10-2018 IPR029787 Nucleotide cyclase D172_015180 f51f91d12aa168472d8ebd8391082e72 771 Gene3D G3DSA:3.30.70.270 343 513 5.6E-30 T 14-10-2018 D172_013395 cad861da24f8bdd9e3da2ad9e383b4cf 362 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 319 7.2E-118 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 D172_013395 cad861da24f8bdd9e3da2ad9e383b4cf 362 SUPERFAMILY SSF103039 4 230 1.28E-19 T 14-10-2018 IPR028976 CheC-like superfamily D172_013395 cad861da24f8bdd9e3da2ad9e383b4cf 362 Pfam PF02154 Flagellar motor switch protein FliM 37 229 5.4E-81 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 D172_013395 cad861da24f8bdd9e3da2ad9e383b4cf 362 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 8.3E-17 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) D172_013395 cad861da24f8bdd9e3da2ad9e383b4cf 362 PIRSF PIRSF002888 1 328 1.5E-96 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 D172_013395 cad861da24f8bdd9e3da2ad9e383b4cf 362 Gene3D G3DSA:3.40.1550.10 43 230 6.0E-56 T 14-10-2018 IPR028976 CheC-like superfamily D172_013395 cad861da24f8bdd9e3da2ad9e383b4cf 362 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 3.6E-21 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 D172_013395 cad861da24f8bdd9e3da2ad9e383b4cf 362 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 3.6E-21 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 D172_013395 cad861da24f8bdd9e3da2ad9e383b4cf 362 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 3.6E-21 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 D172_013395 cad861da24f8bdd9e3da2ad9e383b4cf 362 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 3.6E-21 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 D172_013395 cad861da24f8bdd9e3da2ad9e383b4cf 362 SUPERFAMILY SSF101801 247 324 2.75E-14 T 14-10-2018 IPR036429 SpoA-like superfamily D172_007115 50ebf0e1bd999c0beb10b9a00c1217e7 388 Gene3D G3DSA:3.10.310.10 180 370 5.5E-144 T 14-10-2018 D172_007115 50ebf0e1bd999c0beb10b9a00c1217e7 388 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 4 387 3.1E-216 T 14-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 D172_007115 50ebf0e1bd999c0beb10b9a00c1217e7 388 Pfam PF04303 PrpF protein 5 387 4.6E-166 T 14-10-2018 IPR007400 PrpF protein D172_007115 50ebf0e1bd999c0beb10b9a00c1217e7 388 SUPERFAMILY SSF54506 185 387 5.81E-74 T 14-10-2018 D172_007115 50ebf0e1bd999c0beb10b9a00c1217e7 388 SUPERFAMILY SSF54506 3 181 3.06E-67 T 14-10-2018 D172_007115 50ebf0e1bd999c0beb10b9a00c1217e7 388 Gene3D G3DSA:3.10.310.10 10 384 5.5E-144 T 14-10-2018 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 Pfam PF00575 S1 RNA binding domain 191 260 2.3E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 Pfam PF00575 S1 RNA binding domain 104 171 7.3E-10 T 14-10-2018 IPR003029 S1 domain GO:0003676 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 Pfam PF00575 S1 RNA binding domain 275 347 1.2E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 Pfam PF00575 S1 RNA binding domain 18 86 3.0E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 Pfam PF00575 S1 RNA binding domain 449 520 6.9E-17 T 14-10-2018 IPR003029 S1 domain GO:0003676 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 Pfam PF00575 S1 RNA binding domain 361 434 8.3E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 SUPERFAMILY SSF50249 191 277 8.95E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_009175 7980579de06d8e00a1158a628c3fddc6 555 SUPERFAMILY SSF50249 429 538 5.82E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_009175 7980579de06d8e00a1158a628c3fddc6 555 SUPERFAMILY SSF50249 255 364 1.64E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_009175 7980579de06d8e00a1158a628c3fddc6 555 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 3.1E-228 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 SUPERFAMILY SSF50249 363 448 2.09E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_009175 7980579de06d8e00a1158a628c3fddc6 555 Gene3D G3DSA:2.40.50.140 269 357 1.4E-29 T 14-10-2018 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 Gene3D G3DSA:2.40.50.140 358 444 4.5E-24 T 14-10-2018 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 Gene3D G3DSA:2.40.50.140 98 184 9.2E-7 T 14-10-2018 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 SUPERFAMILY SSF50249 1 112 3.35E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_009175 7980579de06d8e00a1158a628c3fddc6 555 PIRSF PIRSF002111 1 386 8.8E-180 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 PIRSF PIRSF002111 383 546 4.4E-40 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 Gene3D G3DSA:2.40.50.140 187 268 1.3E-27 T 14-10-2018 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 SUPERFAMILY SSF50249 103 185 2.11E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_009175 7980579de06d8e00a1158a628c3fddc6 555 SMART SM00316 275 347 1.3E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 SMART SM00316 103 171 1.8E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 SMART SM00316 362 434 2.0E-22 T 14-10-2018 IPR022967 RNA-binding domain, S1 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 SMART SM00316 449 520 3.1E-18 T 14-10-2018 IPR022967 RNA-binding domain, S1 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 SMART SM00316 190 260 7.3E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 SMART SM00316 19 87 6.0E-5 T 14-10-2018 IPR022967 RNA-binding domain, S1 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.8E-95 T 14-10-2018 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.8E-95 T 14-10-2018 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.8E-95 T 14-10-2018 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.8E-95 T 14-10-2018 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.8E-95 T 14-10-2018 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.8E-95 T 14-10-2018 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.8E-95 T 14-10-2018 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.8E-95 T 14-10-2018 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.8E-95 T 14-10-2018 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 Gene3D G3DSA:2.40.50.140 445 528 3.3E-20 T 14-10-2018 D172_009175 7980579de06d8e00a1158a628c3fddc6 555 Gene3D G3DSA:2.40.50.140 6 97 3.5E-17 T 14-10-2018 D172_007235 78ecc4e1a059b034ac8c7ede4fea05c5 503 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 398 501 6.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_007235 78ecc4e1a059b034ac8c7ede4fea05c5 503 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 160 276 2.5E-6 T 14-10-2018 IPR000014 PAS domain D172_007235 78ecc4e1a059b034ac8c7ede4fea05c5 503 SUPERFAMILY SSF55874 377 502 2.36E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_007235 78ecc4e1a059b034ac8c7ede4fea05c5 503 Pfam PF00512 His Kinase A (phospho-acceptor) domain 287 352 2.5E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_007235 78ecc4e1a059b034ac8c7ede4fea05c5 503 SUPERFAMILY SSF55785 165 272 3.81E-9 T 14-10-2018 IPR035965 PAS domain superfamily D172_007235 78ecc4e1a059b034ac8c7ede4fea05c5 503 SMART SM00388 286 354 2.6E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_007235 78ecc4e1a059b034ac8c7ede4fea05c5 503 SMART SM00387 393 503 2.9E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_007235 78ecc4e1a059b034ac8c7ede4fea05c5 503 Gene3D G3DSA:1.10.287.130 284 353 8.8E-12 T 14-10-2018 D172_007235 78ecc4e1a059b034ac8c7ede4fea05c5 503 Gene3D G3DSA:3.30.565.10 362 503 2.9E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_007235 78ecc4e1a059b034ac8c7ede4fea05c5 503 Gene3D G3DSA:3.30.450.20 154 283 3.4E-8 T 14-10-2018 D172_007235 78ecc4e1a059b034ac8c7ede4fea05c5 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 3.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_007235 78ecc4e1a059b034ac8c7ede4fea05c5 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 501 3.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_007235 78ecc4e1a059b034ac8c7ede4fea05c5 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 482 3.7E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_007235 78ecc4e1a059b034ac8c7ede4fea05c5 503 SUPERFAMILY SSF47384 274 352 4.12E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_006670 6a8d80718d1645e4fca6b4ea0fc76696 180 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 78 180 9.0E-43 T 14-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 D172_006670 6a8d80718d1645e4fca6b4ea0fc76696 180 Pfam PF00691 OmpA family 79 174 2.4E-21 T 14-10-2018 IPR006665 OmpA-like domain D172_006670 6a8d80718d1645e4fca6b4ea0fc76696 180 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 180 30.0 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 D172_006670 6a8d80718d1645e4fca6b4ea0fc76696 180 SUPERFAMILY SSF103088 64 179 2.09E-32 T 14-10-2018 IPR036737 OmpA-like domain superfamily D172_006670 6a8d80718d1645e4fca6b4ea0fc76696 180 Gene3D G3DSA:3.30.1330.60 49 180 6.8E-39 T 14-10-2018 IPR036737 OmpA-like domain superfamily D172_006670 6a8d80718d1645e4fca6b4ea0fc76696 180 PRINTS PR01021 OMPA domain signature 80 102 9.5E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D172_006670 6a8d80718d1645e4fca6b4ea0fc76696 180 PRINTS PR01021 OMPA domain signature 110 125 9.5E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D172_006670 6a8d80718d1645e4fca6b4ea0fc76696 180 PRINTS PR01021 OMPA domain signature 125 141 9.5E-15 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D172_008770 a86270bbdb9cfe88d35c6cdfaee5763b 274 Pfam PF00561 alpha/beta hydrolase fold 24 160 6.2E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_008770 a86270bbdb9cfe88d35c6cdfaee5763b 274 PRINTS PR00412 Epoxide hydrolase signature 93 106 8.2E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D172_008770 a86270bbdb9cfe88d35c6cdfaee5763b 274 PRINTS PR00412 Epoxide hydrolase signature 246 268 8.2E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D172_008770 a86270bbdb9cfe88d35c6cdfaee5763b 274 PRINTS PR00412 Epoxide hydrolase signature 29 47 8.2E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D172_008770 a86270bbdb9cfe88d35c6cdfaee5763b 274 PRINTS PR00412 Epoxide hydrolase signature 107 120 8.2E-10 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D172_008770 a86270bbdb9cfe88d35c6cdfaee5763b 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 7.1E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_008770 a86270bbdb9cfe88d35c6cdfaee5763b 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 215 229 7.1E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_008770 a86270bbdb9cfe88d35c6cdfaee5763b 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 7.1E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_008770 a86270bbdb9cfe88d35c6cdfaee5763b 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 7.1E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_008770 a86270bbdb9cfe88d35c6cdfaee5763b 274 SUPERFAMILY SSF53474 4 270 4.26E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_008770 a86270bbdb9cfe88d35c6cdfaee5763b 274 Gene3D G3DSA:3.40.50.1820 1 273 3.5E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_001335 80aa0668cec3e77a2d6c20e379ce387b 492 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 41 426 7.4E-64 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D172_001335 80aa0668cec3e77a2d6c20e379ce387b 492 Pfam PF00474 Sodium:solute symporter family 41 426 8.3E-39 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D172_001335 80aa0668cec3e77a2d6c20e379ce387b 492 Gene3D G3DSA:1.20.1730.10 30 478 6.7E-100 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily D172_010850 1927f4003862356119ca6613195c34aa 217 SUPERFAMILY SSF55821 8 210 1.24E-81 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily D172_010850 1927f4003862356119ca6613195c34aa 217 Gene3D G3DSA:3.90.870.10 1 217 3.8E-88 T 14-10-2018 D172_010850 1927f4003862356119ca6613195c34aa 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 208 1.2E-78 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_010850 1927f4003862356119ca6613195c34aa 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 40.025 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_010850 1927f4003862356119ca6613195c34aa 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 208 7.9E-81 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_019695 2b96e0de67748c4bf115fbec7c577f5f 257 Gene3D G3DSA:1.10.150.20 171 257 2.7E-21 T 14-10-2018 D172_019695 2b96e0de67748c4bf115fbec7c577f5f 257 SUPERFAMILY SSF88723 2 158 1.96E-34 T 14-10-2018 IPR029060 PIN-like domain superfamily D172_019695 2b96e0de67748c4bf115fbec7c577f5f 257 SMART SM00475 2 257 5.4E-42 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 D172_019695 2b96e0de67748c4bf115fbec7c577f5f 257 Gene3D G3DSA:3.40.50.1010 1 169 3.9E-43 T 14-10-2018 D172_019695 2b96e0de67748c4bf115fbec7c577f5f 257 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 167 1.3E-28 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 D172_019695 2b96e0de67748c4bf115fbec7c577f5f 257 SMART SM00279 170 205 2.8E-9 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 D172_019695 2b96e0de67748c4bf115fbec7c577f5f 257 SUPERFAMILY SSF47807 167 256 1.2E-20 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily D172_019695 2b96e0de67748c4bf115fbec7c577f5f 257 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 169 256 8.3E-23 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 D172_012085 30035ea842d063f3007ac6d916efbecd 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 11 59 1.3E-9 T 14-10-2018 D172_012085 30035ea842d063f3007ac6d916efbecd 83 SUPERFAMILY SSF143120 11 67 7.32E-9 T 14-10-2018 IPR036165 YefM-like superfamily D172_012085 30035ea842d063f3007ac6d916efbecd 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 71 9.5E-12 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM D172_002680 8cdca3d5fea49c7fda78aa839e38de47 378 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 6 369 6.6E-128 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 D172_002680 8cdca3d5fea49c7fda78aa839e38de47 378 SUPERFAMILY SSF102114 4 377 8.37E-109 T 14-10-2018 D172_002680 8cdca3d5fea49c7fda78aa839e38de47 378 Pfam PF06969 HemN C-terminal domain 305 366 6.0E-11 T 14-10-2018 IPR010723 HemN, C-terminal D172_002680 8cdca3d5fea49c7fda78aa839e38de47 378 Gene3D G3DSA:3.80.30.20 1 300 1.4E-98 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe D172_002680 8cdca3d5fea49c7fda78aa839e38de47 378 SMART SM00729 5 221 6.9E-49 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D172_002680 8cdca3d5fea49c7fda78aa839e38de47 378 Pfam PF04055 Radical SAM superfamily 10 175 3.2E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D172_006470 f61df64e798ac884b4174222c3d9360e 375 Gene3D G3DSA:2.60.40.3120 1 112 6.6E-44 T 14-10-2018 D172_006470 f61df64e798ac884b4174222c3d9360e 375 SMART SM00631 40 326 2.5E-5 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 D172_006470 f61df64e798ac884b4174222c3d9360e 375 SUPERFAMILY SSF53187 104 373 4.63E-61 T 14-10-2018 D172_006470 f61df64e798ac884b4174222c3d9360e 375 Gene3D G3DSA:3.40.630.10 113 375 1.0E-68 T 14-10-2018 D172_006470 f61df64e798ac884b4174222c3d9360e 375 Pfam PF00246 Zinc carboxypeptidase 128 340 4.1E-24 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 D172_001595 f6853931031ac46ce2fe01e401453e93 187 Pfam PF02357 Transcription termination factor nusG 13 117 2.9E-27 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D172_001595 f6853931031ac46ce2fe01e401453e93 187 ProSitePatterns PS01014 Transcription termination factor nusG signature. 169 178 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site D172_001595 f6853931031ac46ce2fe01e401453e93 187 Gene3D G3DSA:2.30.30.30 128 185 1.1E-24 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 D172_001595 f6853931031ac46ce2fe01e401453e93 187 Pfam PF00467 KOW motif 135 165 2.8E-9 T 14-10-2018 IPR005824 KOW D172_001595 f6853931031ac46ce2fe01e401453e93 187 Gene3D G3DSA:3.30.70.940 6 127 1.1E-45 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D172_001595 f6853931031ac46ce2fe01e401453e93 187 SMART SM00738 11 120 2.4E-45 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D172_001595 f6853931031ac46ce2fe01e401453e93 187 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 14 185 1.9E-66 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 D172_001595 f6853931031ac46ce2fe01e401453e93 187 SUPERFAMILY SSF82679 12 123 4.32E-38 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D172_001595 f6853931031ac46ce2fe01e401453e93 187 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 11 186 23.561 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 D172_001595 f6853931031ac46ce2fe01e401453e93 187 SUPERFAMILY SSF50104 131 184 2.11E-18 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily D172_001595 f6853931031ac46ce2fe01e401453e93 187 SMART SM00739 132 159 1.7E-7 T 14-10-2018 IPR005824 KOW D172_001595 f6853931031ac46ce2fe01e401453e93 187 PRINTS PR00338 Transcription termination factor NUSG signature 162 178 1.8E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 D172_001595 f6853931031ac46ce2fe01e401453e93 187 PRINTS PR00338 Transcription termination factor NUSG signature 144 159 1.8E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 D172_001595 f6853931031ac46ce2fe01e401453e93 187 PRINTS PR00338 Transcription termination factor NUSG signature 66 78 1.8E-20 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 D172_011200 5b4b3d73e5c4ff545fce71c345e21427 458 SUPERFAMILY SSF143548 16 157 7.32E-46 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 D172_011200 5b4b3d73e5c4ff545fce71c345e21427 458 Gene3D G3DSA:3.30.1330.90 10 159 4.0E-52 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 D172_011200 5b4b3d73e5c4ff545fce71c345e21427 458 Pfam PF03313 Serine dehydratase alpha chain 190 452 1.5E-99 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit D172_011200 5b4b3d73e5c4ff545fce71c345e21427 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 455 2.9E-211 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 D172_011200 5b4b3d73e5c4ff545fce71c345e21427 458 Pfam PF03315 Serine dehydratase beta chain 3 155 2.4E-55 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 D172_017780 de53ec782472539933ae6409ca93f3f5 454 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 32 431 1.2E-179 T 14-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 D172_017780 de53ec782472539933ae6409ca93f3f5 454 Gene3D G3DSA:2.30.40.10 14 429 1.0E-181 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D172_017780 de53ec782472539933ae6409ca93f3f5 454 Pfam PF01979 Amidohydrolase family 72 434 2.5E-71 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 D172_017780 de53ec782472539933ae6409ca93f3f5 454 SUPERFAMILY SSF51338 29 91 1.09E-9 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D172_017780 de53ec782472539933ae6409ca93f3f5 454 Gene3D G3DSA:3.20.20.140 76 393 1.0E-181 T 14-10-2018 D172_017780 de53ec782472539933ae6409ca93f3f5 454 SUPERFAMILY SSF51556 75 378 6.41E-95 T 14-10-2018 IPR032466 Metal-dependent hydrolase D172_018295 d840392333e60c8b3e3692ba79d781db 464 SUPERFAMILY SSF51126 32 313 3.64E-48 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor D172_018295 d840392333e60c8b3e3692ba79d781db 464 PRINTS PR00807 Pollen allergen Amb family signature 38 55 8.2E-6 T 14-10-2018 IPR018082 AmbAllergen KEGG: 00040+4.2.2.2 D172_018295 d840392333e60c8b3e3692ba79d781db 464 PRINTS PR00807 Pollen allergen Amb family signature 61 86 8.2E-6 T 14-10-2018 IPR018082 AmbAllergen KEGG: 00040+4.2.2.2 D172_018295 d840392333e60c8b3e3692ba79d781db 464 Gene3D G3DSA:2.160.20.10 24 381 1.3E-70 T 14-10-2018 IPR012334 Pectin lyase fold D172_004915 032c6fce8b373688aabb55c0ebb571df 250 PIRSF PIRSF009437 1 250 3.4E-82 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 D172_004915 032c6fce8b373688aabb55c0ebb571df 250 Pfam PF04205 FMN-binding domain 145 231 2.4E-15 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 D172_004915 032c6fce8b373688aabb55c0ebb571df 250 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 247 34.327 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 D172_004915 032c6fce8b373688aabb55c0ebb571df 250 SMART SM00900 145 235 1.4E-27 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 D172_004915 032c6fce8b373688aabb55c0ebb571df 250 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 6 243 2.7E-68 T 14-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 D172_014280 229b4ccc65d81bb760778e083577d369 646 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 619 6.3E-224 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 D172_014280 229b4ccc65d81bb760778e083577d369 646 SMART SM00493 1 124 2.0E-22 T 14-10-2018 IPR006171 TOPRIM domain D172_014280 229b4ccc65d81bb760778e083577d369 646 Gene3D G3DSA:1.10.460.10 162 594 2.3E-161 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 D172_014280 229b4ccc65d81bb760778e083577d369 646 SMART SM00437 280 557 1.4E-77 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 D172_014280 229b4ccc65d81bb760778e083577d369 646 Pfam PF01751 Toprim domain 3 126 3.1E-13 T 14-10-2018 IPR006171 TOPRIM domain D172_014280 229b4ccc65d81bb760778e083577d369 646 Pfam PF01131 DNA topoisomerase 158 592 1.9E-114 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D172_014280 229b4ccc65d81bb760778e083577d369 646 Gene3D G3DSA:3.40.50.140 1 156 1.0E-59 T 14-10-2018 D172_014280 229b4ccc65d81bb760778e083577d369 646 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 4.1E-24 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D172_014280 229b4ccc65d81bb760778e083577d369 646 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 520 534 4.1E-24 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D172_014280 229b4ccc65d81bb760778e083577d369 646 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 4.1E-24 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D172_014280 229b4ccc65d81bb760778e083577d369 646 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 404 420 4.1E-24 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D172_014280 229b4ccc65d81bb760778e083577d369 646 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 4.1E-24 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D172_014280 229b4ccc65d81bb760778e083577d369 646 SUPERFAMILY SSF56712 1 604 3.4E-178 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain D172_014280 229b4ccc65d81bb760778e083577d369 646 SMART SM00436 128 223 9.0E-26 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 D172_014280 229b4ccc65d81bb760778e083577d369 646 Gene3D G3DSA:2.70.20.10 217 487 2.3E-161 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 D172_014280 229b4ccc65d81bb760778e083577d369 646 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 D172_014280 229b4ccc65d81bb760778e083577d369 646 Gene3D G3DSA:1.10.290.10 289 418 2.3E-161 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 D172_018460 47a685aea3884f88ad798858b161ecc0 143 Gene3D G3DSA:3.40.50.620 2 143 3.4E-32 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_018460 47a685aea3884f88ad798858b161ecc0 143 Pfam PF00582 Universal stress protein family 5 143 3.2E-25 T 14-10-2018 IPR006016 UspA D172_018460 47a685aea3884f88ad798858b161ecc0 143 SUPERFAMILY SSF52402 5 143 2.09E-31 T 14-10-2018 D172_018460 47a685aea3884f88ad798858b161ecc0 143 PRINTS PR01438 Universal stress protein signature 103 115 3.9E-9 T 14-10-2018 IPR006015 Universal stress protein A D172_018460 47a685aea3884f88ad798858b161ecc0 143 PRINTS PR01438 Universal stress protein signature 121 143 3.9E-9 T 14-10-2018 IPR006015 Universal stress protein A D172_018460 47a685aea3884f88ad798858b161ecc0 143 PRINTS PR01438 Universal stress protein signature 3 21 3.9E-9 T 14-10-2018 IPR006015 Universal stress protein A D172_000235 c3edc2cd285cddc89bc208bb9e17c891 285 SUPERFAMILY SSF81336 96 278 1.29E-41 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000235 c3edc2cd285cddc89bc208bb9e17c891 285 ProSitePatterns PS00449 ATP synthase a subunit signature. 221 230 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000235 c3edc2cd285cddc89bc208bb9e17c891 285 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 40 279 7.3E-40 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000235 c3edc2cd285cddc89bc208bb9e17c891 285 Pfam PF00119 ATP synthase A chain 49 278 1.3E-55 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000235 c3edc2cd285cddc89bc208bb9e17c891 285 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 284 15.614 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000235 c3edc2cd285cddc89bc208bb9e17c891 285 Gene3D G3DSA:1.20.120.220 96 285 3.1E-53 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_009610 1d59f41f1ceb70e03d7b424de96a7fd9 414 Pfam PF12704 MacB-like periplasmic core domain 33 232 1.6E-10 T 14-10-2018 IPR025857 MacB-like periplasmic core domain D172_009610 1d59f41f1ceb70e03d7b424de96a7fd9 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 20 412 8.1E-121 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 D172_009610 1d59f41f1ceb70e03d7b424de96a7fd9 414 Pfam PF02687 FtsX-like permease family 303 408 5.3E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 D172_005425 115254477cd7be2f43407e3d141b7a8c 306 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 47 299 1.2E-7 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 D172_005425 115254477cd7be2f43407e3d141b7a8c 306 Gene3D G3DSA:3.40.50.720 92 272 1.5E-94 T 14-10-2018 D172_005425 115254477cd7be2f43407e3d141b7a8c 306 SUPERFAMILY SSF52283 33 122 3.61E-11 T 14-10-2018 D172_005425 115254477cd7be2f43407e3d141b7a8c 306 Gene3D G3DSA:3.40.50.720 17 306 1.5E-94 T 14-10-2018 D172_005425 115254477cd7be2f43407e3d141b7a8c 306 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 271 1.3E-40 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 D172_005425 115254477cd7be2f43407e3d141b7a8c 306 SUPERFAMILY SSF51735 94 272 2.12E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_017730 62d4e4ddb42d16d6b1cf6e6508c66411 412 Gene3D G3DSA:1.20.1250.20 202 404 3.8E-27 T 14-10-2018 D172_017730 62d4e4ddb42d16d6b1cf6e6508c66411 412 SUPERFAMILY SSF103473 4 403 9.42E-40 T 14-10-2018 IPR036259 MFS transporter superfamily D172_017730 62d4e4ddb42d16d6b1cf6e6508c66411 412 Gene3D G3DSA:1.20.1250.20 4 195 4.6E-16 T 14-10-2018 D172_017730 62d4e4ddb42d16d6b1cf6e6508c66411 412 Pfam PF07690 Major Facilitator Superfamily 12 364 4.9E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_011945 93191c156c6673c15a1334bf759ceab6 285 Gene3D G3DSA:3.30.230.10 1 162 1.8E-54 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D172_011945 93191c156c6673c15a1334bf759ceab6 285 Pfam PF00288 GHMP kinases N terminal domain 90 146 4.0E-9 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 D172_011945 93191c156c6673c15a1334bf759ceab6 285 Pfam PF08544 GHMP kinases C terminal 207 258 5.8E-7 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain D172_011945 93191c156c6673c15a1334bf759ceab6 285 SUPERFAMILY SSF55060 163 277 3.02E-32 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily D172_011945 93191c156c6673c15a1334bf759ceab6 285 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 7 279 5.8E-82 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 D172_011945 93191c156c6673c15a1334bf759ceab6 285 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 7 272 31.625 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 D172_011945 93191c156c6673c15a1334bf759ceab6 285 SUPERFAMILY SSF54211 6 159 3.64E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_011945 93191c156c6673c15a1334bf759ceab6 285 Gene3D G3DSA:3.30.70.890 164 280 2.8E-28 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily D172_011945 93191c156c6673c15a1334bf759ceab6 285 PIRSF PIRSF010376 5 280 8.8E-85 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 SUPERFAMILY SSF110942 521 633 7.98E-38 T 14-10-2018 IPR037196 HSP90, C-terminal domain D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 SUPERFAMILY SSF54211 239 494 6.45E-96 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 Gene3D G3DSA:3.30.230.80 238 410 6.7E-69 T 14-10-2018 D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 PIRSF PIRSF002583 2 637 3.5E-220 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 SUPERFAMILY SSF55874 7 214 2.36E-67 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 27 36 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 Gene3D G3DSA:3.30.565.10 1 227 1.5E-76 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 Gene3D G3DSA:1.20.120.790 503 634 1.6E-47 T 14-10-2018 IPR037196 HSP90, C-terminal domain D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 183 1.1E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 PRINTS PR00775 90kDa heat shock protein signature 77 94 6.1E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 PRINTS PR00775 90kDa heat shock protein signature 7 27 6.1E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 PRINTS PR00775 90kDa heat shock protein signature 95 112 6.1E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 PRINTS PR00775 90kDa heat shock protein signature 190 208 6.1E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 PRINTS PR00775 90kDa heat shock protein signature 28 50 6.1E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 PRINTS PR00775 90kDa heat shock protein signature 172 189 6.1E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 PRINTS PR00775 90kDa heat shock protein signature 122 144 6.1E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 Pfam PF00183 Hsp90 protein 224 633 2.6E-129 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 Gene3D G3DSA:3.40.50.11260 411 502 4.6E-33 T 14-10-2018 D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 633 32.892 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 D172_011025 b8ba6f6aa125ebb43fc77a2c2904e1fe 637 SMART SM00387 29 184 2.8E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_006975 8ff21de75a9321cbe2ac63987621518a 572 PIRSF PIRSF000719 1 572 6.9E-209 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 D172_006975 8ff21de75a9321cbe2ac63987621518a 572 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 6 565 9.7E-237 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 D172_006975 8ff21de75a9321cbe2ac63987621518a 572 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 1 568 0.0 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 D172_006975 8ff21de75a9321cbe2ac63987621518a 572 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 569 43.119 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 D172_013805 0c610d47e387c6f3ae48be116f7d41e3 106 Pfam PF04269 Protein of unknown function, DUF440 8 104 5.5E-35 T 14-10-2018 IPR007376 dsDNA mimic, putative D172_013805 0c610d47e387c6f3ae48be116f7d41e3 106 SUPERFAMILY SSF102816 7 104 3.92E-24 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily D172_013805 0c610d47e387c6f3ae48be116f7d41e3 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 7.0E-43 T 14-10-2018 IPR007376 dsDNA mimic, putative D172_013805 0c610d47e387c6f3ae48be116f7d41e3 106 Gene3D G3DSA:3.10.450.140 8 104 9.1E-31 T 14-10-2018 IPR036763 Putative dsDNA mimic superfamily D172_013580 e034c6db410d45674279503f85755b16 397 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 27 113 9.5E-19 T 14-10-2018 IPR032370 Flagellar assembly protein T, N-terminal D172_013580 e034c6db410d45674279503f85755b16 397 Gene3D G3DSA:2.40.10.410 308 396 5.5E-14 T 14-10-2018 IPR038165 FlgT, C-terminal domain superfamily D172_013580 e034c6db410d45674279503f85755b16 397 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 316 391 5.1E-18 T 14-10-2018 IPR032388 Flagellar assembly protein T, C-terminal D172_013580 e034c6db410d45674279503f85755b16 397 Gene3D G3DSA:3.40.50.10610 118 307 2.3E-48 T 14-10-2018 D172_013580 e034c6db410d45674279503f85755b16 397 Pfam PF16539 Flagellar assembly protein T, middle domain 117 273 2.3E-43 T 14-10-2018 IPR032386 Flagellar assembly protein T, middle domain D172_013580 e034c6db410d45674279503f85755b16 397 Gene3D G3DSA:3.30.1660.40 27 117 4.6E-25 T 14-10-2018 IPR038180 FlgT, N-terminal domain superfamily D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 SMART SM00448 876 995 1.4E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 SMART SM00388 496 561 8.3E-25 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 SUPERFAMILY SSF52172 872 999 9.53E-37 T 14-10-2018 IPR011006 CheY-like superfamily D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 Gene3D G3DSA:3.30.450.20 345 460 2.9E-9 T 14-10-2018 D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 Pfam PF00072 Response regulator receiver domain 878 995 5.8E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 Gene3D G3DSA:3.30.565.10 560 730 1.9E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 SUPERFAMILY SSF47384 481 562 6.08E-23 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 SMART SM00387 608 724 5.9E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 SUPERFAMILY SSF103190 26 211 3.22E-37 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 SUPERFAMILY SSF55874 550 721 2.88E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 Gene3D G3DSA:3.40.50.12740 875 1000 6.5E-40 T 14-10-2018 D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 Gene3D G3DSA:3.30.450.20 78 211 4.3E-28 T 14-10-2018 D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 608 722 7.8E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 Pfam PF00512 His Kinase A (phospho-acceptor) domain 496 561 1.4E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 351 465 6.3E-7 T 14-10-2018 IPR000014 PAS domain D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 SUPERFAMILY SSF55785 358 466 2.09E-5 T 14-10-2018 IPR035965 PAS domain superfamily D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 PRINTS PR00344 Bacterial sensor protein C-terminal signature 649 663 3.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 PRINTS PR00344 Bacterial sensor protein C-terminal signature 708 721 3.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 677 3.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 702 3.0E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_008465 0340a6184c60ab8fd85b1e8c4a6c96f4 1000 Gene3D G3DSA:1.10.287.130 461 559 1.3E-28 T 14-10-2018 D172_011370 5af748d1ba342617f49c828b0b3eb6d3 177 Gene3D G3DSA:3.30.70.260 5 88 1.6E-22 T 14-10-2018 D172_011370 5af748d1ba342617f49c828b0b3eb6d3 177 SUPERFAMILY SSF55021 93 176 1.97E-11 T 14-10-2018 D172_011370 5af748d1ba342617f49c828b0b3eb6d3 177 PIRSF PIRSF028103 5 177 1.1E-45 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 D172_011370 5af748d1ba342617f49c828b0b3eb6d3 177 Pfam PF13740 ACT domain 7 82 5.1E-22 T 14-10-2018 D172_011370 5af748d1ba342617f49c828b0b3eb6d3 177 SUPERFAMILY SSF55021 6 84 9.41E-16 T 14-10-2018 D172_011370 5af748d1ba342617f49c828b0b3eb6d3 177 Gene3D G3DSA:3.30.70.260 91 175 6.8E-12 T 14-10-2018 D172_017860 94feffc444c727e4a364dec4e92d07c8 422 Pfam PF01548 Transposase 13 169 2.8E-27 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D172_017860 94feffc444c727e4a364dec4e92d07c8 422 Pfam PF02371 Transposase IS116/IS110/IS902 family 279 363 1.8E-15 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D172_002250 6babb785fb7c72a24887211cd4f6609b 495 SUPERFAMILY SSF58104 186 495 8.24E-72 T 14-10-2018 D172_002250 6babb785fb7c72a24887211cd4f6609b 495 SMART SM00304 164 218 5.4E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_002250 6babb785fb7c72a24887211cd4f6609b 495 Pfam PF00672 HAMP domain 166 209 9.8E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_002250 6babb785fb7c72a24887211cd4f6609b 495 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 299 458 4.8E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_002250 6babb785fb7c72a24887211cd4f6609b 495 SMART SM00283 233 494 4.2E-57 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_002250 6babb785fb7c72a24887211cd4f6609b 495 Gene3D G3DSA:1.10.287.950 164 495 1.1E-66 T 14-10-2018 D172_004015 1ff2792e8a96b7348ce4fee687bdb8f6 370 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 350 6.7E-122 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 D172_004015 1ff2792e8a96b7348ce4fee687bdb8f6 370 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 350 8.1E-73 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 D172_020260 aeb4cca3e924a928869f15c7daaac40b 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 23 192 9.5E-18 T 14-10-2018 D172_020260 aeb4cca3e924a928869f15c7daaac40b 232 Gene3D G3DSA:1.10.150.240 16 90 2.1E-69 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D172_020260 aeb4cca3e924a928869f15c7daaac40b 232 SUPERFAMILY SSF56784 2 217 2.32E-47 T 14-10-2018 IPR036412 HAD-like superfamily D172_020260 aeb4cca3e924a928869f15c7daaac40b 232 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 4 197 4.2E-55 T 14-10-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 D172_020260 aeb4cca3e924a928869f15c7daaac40b 232 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 5 182 1.9E-20 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_020260 aeb4cca3e924a928869f15c7daaac40b 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 181 194 5.3E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_020260 aeb4cca3e924a928869f15c7daaac40b 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 5.3E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_020260 aeb4cca3e924a928869f15c7daaac40b 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 5.3E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_020260 aeb4cca3e924a928869f15c7daaac40b 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 28 41 5.3E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_020260 aeb4cca3e924a928869f15c7daaac40b 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 5.3E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_020260 aeb4cca3e924a928869f15c7daaac40b 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 42 55 5.3E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_020260 aeb4cca3e924a928869f15c7daaac40b 232 Gene3D G3DSA:3.40.50.1000 5 217 2.1E-69 T 14-10-2018 IPR023214 HAD superfamily D172_013735 0631705d6107b00158ba427ffaa88db9 225 SMART SM00535 20 148 4.7E-54 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 D172_013735 0631705d6107b00158ba427ffaa88db9 225 Pfam PF14622 Ribonuclease-III-like 18 139 2.9E-31 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 D172_013735 0631705d6107b00158ba427ffaa88db9 225 Pfam PF00035 Double-stranded RNA binding motif 155 219 8.8E-16 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain D172_013735 0631705d6107b00158ba427ffaa88db9 225 Gene3D G3DSA:3.30.160.20 147 224 5.2E-19 T 14-10-2018 D172_013735 0631705d6107b00158ba427ffaa88db9 225 SMART SM00358 155 222 3.7E-19 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain D172_013735 0631705d6107b00158ba427ffaa88db9 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 D172_013735 0631705d6107b00158ba427ffaa88db9 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 10 219 2.8E-71 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 D172_013735 0631705d6107b00158ba427ffaa88db9 225 SUPERFAMILY SSF54768 109 221 1.06E-26 T 14-10-2018 D172_013735 0631705d6107b00158ba427ffaa88db9 225 Gene3D G3DSA:1.10.1520.10 1 146 6.4E-44 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 D172_013735 0631705d6107b00158ba427ffaa88db9 225 SUPERFAMILY SSF69065 3 157 7.5E-49 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 D172_013735 0631705d6107b00158ba427ffaa88db9 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 218 28.252 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 D172_015165 2d054f043eb1bb527407fe3b229f89fd 354 SUPERFAMILY SSF53756 1 352 1.88E-12 T 14-10-2018 D172_015165 2d054f043eb1bb527407fe3b229f89fd 354 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 130 351 6.6E-13 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 D172_015165 2d054f043eb1bb527407fe3b229f89fd 354 Gene3D G3DSA:3.40.50.12580 151 287 2.4E-11 T 14-10-2018 D172_003190 b8ce41de06d760ff2078906f8637c2d2 142 Pfam PF01894 Uncharacterised protein family UPF0047 20 136 2.4E-36 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 D172_003190 b8ce41de06d760ff2078906f8637c2d2 142 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 6 140 8.6E-43 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 D172_003190 b8ce41de06d760ff2078906f8637c2d2 142 SUPERFAMILY SSF111038 1 140 7.46E-48 T 14-10-2018 IPR035917 YjbQ-like superfamily D172_003190 b8ce41de06d760ff2078906f8637c2d2 142 Gene3D G3DSA:2.60.120.460 1 140 2.5E-40 T 14-10-2018 IPR035917 YjbQ-like superfamily D172_003190 b8ce41de06d760ff2078906f8637c2d2 142 PIRSF PIRSF004681 1 140 1.8E-45 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 D172_014310 29de76d0867204b2b1032fa4f4776436 620 Pfam PF02780 Transketolase, C-terminal domain 495 611 1.8E-24 T 14-10-2018 IPR033248 Transketolase, C-terminal domain D172_014310 29de76d0867204b2b1032fa4f4776436 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 11 282 4.5E-119 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D172_014310 29de76d0867204b2b1032fa4f4776436 620 SMART SM00861 319 482 5.2E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D172_014310 29de76d0867204b2b1032fa4f4776436 620 Pfam PF02779 Transketolase, pyrimidine binding domain 319 479 6.8E-40 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D172_014310 29de76d0867204b2b1032fa4f4776436 620 SUPERFAMILY SSF52518 8 381 2.01E-75 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_014310 29de76d0867204b2b1032fa4f4776436 620 SUPERFAMILY SSF52518 317 504 5.35E-58 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_014310 29de76d0867204b2b1032fa4f4776436 620 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D172_014310 29de76d0867204b2b1032fa4f4776436 620 SUPERFAMILY SSF52922 492 619 2.22E-30 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D172_014310 29de76d0867204b2b1032fa4f4776436 620 Gene3D G3DSA:3.40.50.920 495 620 3.0E-42 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D172_014310 29de76d0867204b2b1032fa4f4776436 620 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D172_014310 29de76d0867204b2b1032fa4f4776436 620 Gene3D G3DSA:3.40.50.970 317 491 2.6E-67 T 14-10-2018 D172_014310 29de76d0867204b2b1032fa4f4776436 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 4.9E-292 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D172_014310 29de76d0867204b2b1032fa4f4776436 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.739 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D172_005910 edb74eaff91870485f1a6e3097d7d722 344 Gene3D G3DSA:3.40.50.2300 216 342 8.3E-24 T 14-10-2018 D172_005910 edb74eaff91870485f1a6e3097d7d722 344 SMART SM00448 224 338 2.5E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005910 edb74eaff91870485f1a6e3097d7d722 344 Pfam PF00072 Response regulator receiver domain 226 338 1.2E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005910 edb74eaff91870485f1a6e3097d7d722 344 SUPERFAMILY SSF52172 222 341 1.2E-25 T 14-10-2018 IPR011006 CheY-like superfamily D172_018320 a1bf065607eb655fc399b9682018c853 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.3E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018320 a1bf065607eb655fc399b9682018c853 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.3E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018320 a1bf065607eb655fc399b9682018c853 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.3E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018320 a1bf065607eb655fc399b9682018c853 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.3E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018320 a1bf065607eb655fc399b9682018c853 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.3E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018320 a1bf065607eb655fc399b9682018c853 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.3E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018320 a1bf065607eb655fc399b9682018c853 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D172_018320 a1bf065607eb655fc399b9682018c853 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 4.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018320 a1bf065607eb655fc399b9682018c853 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018320 a1bf065607eb655fc399b9682018c853 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018320 a1bf065607eb655fc399b9682018c853 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 249 1.9E-56 T 14-10-2018 D172_018320 a1bf065607eb655fc399b9682018c853 252 SUPERFAMILY SSF51735 3 251 4.08E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_018320 a1bf065607eb655fc399b9682018c853 252 Gene3D G3DSA:3.40.50.720 1 251 1.2E-76 T 14-10-2018 D172_017460 b4467ac9db0a6eb316b03e3c7f70f1e1 144 Pfam PF01047 MarR family 36 93 6.2E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_017460 b4467ac9db0a6eb316b03e3c7f70f1e1 144 Gene3D G3DSA:1.10.10.10 2 143 4.2E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_017460 b4467ac9db0a6eb316b03e3c7f70f1e1 144 SUPERFAMILY SSF46785 7 140 2.98E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_017460 b4467ac9db0a6eb316b03e3c7f70f1e1 144 SMART SM00347 29 129 2.2E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_016900 002e8bd4ba59700bd25eb4c576761156 405 SUPERFAMILY SSF56112 2 397 9.04E-81 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily D172_016900 002e8bd4ba59700bd25eb4c576761156 405 Gene3D G3DSA:3.90.1200.10 120 403 1.0E-96 T 14-10-2018 D172_016900 002e8bd4ba59700bd25eb4c576761156 405 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 405 164.656 T 14-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 D172_016900 002e8bd4ba59700bd25eb4c576761156 405 PIRSF PIRSF031134 1 404 2.1E-141 T 14-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 D172_016900 002e8bd4ba59700bd25eb4c576761156 405 Gene3D G3DSA:3.30.200.20 1 118 5.4E-37 T 14-10-2018 D172_016900 002e8bd4ba59700bd25eb4c576761156 405 Pfam PF01636 Phosphotransferase enzyme family 38 267 1.4E-11 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase D172_016900 002e8bd4ba59700bd25eb4c576761156 405 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 38 391 2.0E-128 T 14-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 D172_009455 ec7079e9848ffab09777fb306f67518a 425 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 250 264 7.2E-19 T 14-10-2018 D172_009455 ec7079e9848ffab09777fb306f67518a 425 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 7.2E-19 T 14-10-2018 D172_009455 ec7079e9848ffab09777fb306f67518a 425 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 164 189 7.2E-19 T 14-10-2018 D172_009455 ec7079e9848ffab09777fb306f67518a 425 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 289 296 7.2E-19 T 14-10-2018 D172_009455 ec7079e9848ffab09777fb306f67518a 425 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 274 296 1.2E-21 T 14-10-2018 D172_009455 ec7079e9848ffab09777fb306f67518a 425 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 164 182 1.2E-21 T 14-10-2018 D172_009455 ec7079e9848ffab09777fb306f67518a 425 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 15 34 1.2E-21 T 14-10-2018 D172_009455 ec7079e9848ffab09777fb306f67518a 425 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 1.2E-21 T 14-10-2018 D172_009455 ec7079e9848ffab09777fb306f67518a 425 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 249 265 1.2E-21 T 14-10-2018 D172_009455 ec7079e9848ffab09777fb306f67518a 425 SUPERFAMILY SSF51905 12 328 1.02E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_009455 ec7079e9848ffab09777fb306f67518a 425 SUPERFAMILY SSF55424 331 419 1.19E-21 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D172_009455 ec7079e9848ffab09777fb306f67518a 425 Pfam PF14759 Reductase C-terminal 338 419 1.9E-23 T 14-10-2018 IPR028202 Reductase, C-terminal D172_009455 ec7079e9848ffab09777fb306f67518a 425 Gene3D G3DSA:3.50.50.60 123 256 3.9E-92 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_009455 ec7079e9848ffab09777fb306f67518a 425 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 319 8.4E-63 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D172_009455 ec7079e9848ffab09777fb306f67518a 425 Gene3D G3DSA:3.50.50.60 15 320 3.9E-92 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_009455 ec7079e9848ffab09777fb306f67518a 425 Gene3D G3DSA:3.30.390.30 338 424 5.0E-25 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D172_002750 618c32e6ae57aeef2f6132a452d0d40f 931 Gene3D G3DSA:1.20.120.330 797 929 2.6E-38 T 14-10-2018 D172_002750 618c32e6ae57aeef2f6132a452d0d40f 931 Gene3D G3DSA:1.20.120.330 282 437 1.2E-47 T 14-10-2018 D172_002750 618c32e6ae57aeef2f6132a452d0d40f 931 Gene3D G3DSA:1.10.4050.10 4 106 1.6E-5 T 14-10-2018 D172_002750 618c32e6ae57aeef2f6132a452d0d40f 931 SUPERFAMILY SSF81301 515 797 5.89E-85 T 14-10-2018 D172_002750 618c32e6ae57aeef2f6132a452d0d40f 931 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 538 790 7.4E-88 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 D172_002750 618c32e6ae57aeef2f6132a452d0d40f 931 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 33 268 2.4E-69 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 D172_002750 618c32e6ae57aeef2f6132a452d0d40f 931 Gene3D G3DSA:3.30.460.10 111 281 1.8E-59 T 14-10-2018 D172_002750 618c32e6ae57aeef2f6132a452d0d40f 931 Gene3D G3DSA:1.20.120.1510 456 547 1.8E-22 T 14-10-2018 D172_002750 618c32e6ae57aeef2f6132a452d0d40f 931 SUPERFAMILY SSF81593 284 433 7.77E-35 T 14-10-2018 D172_002750 618c32e6ae57aeef2f6132a452d0d40f 931 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 27 930 17.906 T 14-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 D172_002750 618c32e6ae57aeef2f6132a452d0d40f 931 Gene3D G3DSA:3.30.460.100 548 796 4.5E-87 T 14-10-2018 D172_002750 618c32e6ae57aeef2f6132a452d0d40f 931 SUPERFAMILY SSF81301 21 283 4.58E-70 T 14-10-2018 D172_002750 618c32e6ae57aeef2f6132a452d0d40f 931 SUPERFAMILY SSF81593 800 928 2.82E-26 T 14-10-2018 D172_002750 618c32e6ae57aeef2f6132a452d0d40f 931 Pfam PF08335 GlnD PII-uridylyltransferase 812 901 1.2E-7 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 D172_002750 618c32e6ae57aeef2f6132a452d0d40f 931 Pfam PF08335 GlnD PII-uridylyltransferase 294 432 6.7E-34 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 D172_000045 78f41888507cc6cb82c4aedd3b8f97dd 191 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 55 3.7E-15 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 D172_000045 78f41888507cc6cb82c4aedd3b8f97dd 191 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 70 104 6.0E-15 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 D172_000045 78f41888507cc6cb82c4aedd3b8f97dd 191 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 115 152 3.3E-10 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 D172_000045 78f41888507cc6cb82c4aedd3b8f97dd 191 SUPERFAMILY SSF57783 66 104 4.25E-12 T 14-10-2018 D172_000045 78f41888507cc6cb82c4aedd3b8f97dd 191 Gene3D G3DSA:3.30.65.10 10 59 1.5E-8 T 14-10-2018 D172_000045 78f41888507cc6cb82c4aedd3b8f97dd 191 Gene3D G3DSA:3.30.65.10 60 113 3.6E-8 T 14-10-2018 D172_000045 78f41888507cc6cb82c4aedd3b8f97dd 191 SUPERFAMILY SSF57783 21 62 6.21E-12 T 14-10-2018 D172_003910 18d6417117b78aecb7765f0b5f21fb99 113 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.1E-38 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003910 18d6417117b78aecb7765f0b5f21fb99 113 Pfam PF01250 Ribosomal protein S6 3 91 6.2E-29 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003910 18d6417117b78aecb7765f0b5f21fb99 113 SUPERFAMILY SSF54995 1 101 5.62E-38 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003910 18d6417117b78aecb7765f0b5f21fb99 113 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.102 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 D172_003910 18d6417117b78aecb7765f0b5f21fb99 113 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 D172_003910 18d6417117b78aecb7765f0b5f21fb99 113 Gene3D G3DSA:3.30.70.60 1 92 1.2E-32 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 D172_011525 59de246628ad50aafe4ad797562db40a 232 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.06 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 D172_011525 59de246628ad50aafe4ad797562db40a 232 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 200 9.4E-66 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 D172_011525 59de246628ad50aafe4ad797562db40a 232 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 208 3.3E-85 T 14-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 D172_011525 59de246628ad50aafe4ad797562db40a 232 PIRSF PIRSF006102 1 218 3.4E-78 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 D172_010055 8085fb5f4df5f6be0a1494e64a0fb31b 216 ProSitePatterns PS00760 Signal peptidases I lysine active site. 92 104 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 D172_010055 8085fb5f4df5f6be0a1494e64a0fb31b 216 Pfam PF00717 Peptidase S24-like 33 113 9.7E-17 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D172_010055 8085fb5f4df5f6be0a1494e64a0fb31b 216 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 158 177 7.8E-19 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D172_010055 8085fb5f4df5f6be0a1494e64a0fb31b 216 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 90 102 7.8E-19 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D172_010055 8085fb5f4df5f6be0a1494e64a0fb31b 216 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 27 43 7.8E-19 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D172_010055 8085fb5f4df5f6be0a1494e64a0fb31b 216 Gene3D G3DSA:2.10.109.10 25 197 7.5E-46 T 14-10-2018 D172_010055 8085fb5f4df5f6be0a1494e64a0fb31b 216 Gene3D G3DSA:2.170.230.10 101 157 7.5E-46 T 14-10-2018 D172_010055 8085fb5f4df5f6be0a1494e64a0fb31b 216 SUPERFAMILY SSF51306 25 208 3.92E-51 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily D172_010055 8085fb5f4df5f6be0a1494e64a0fb31b 216 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 13 198 2.4E-47 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D172_002645 f47c16d0a401a10c59783d0a8ec36ccb 133 Pfam PF13673 Acetyltransferase (GNAT) domain 17 108 1.6E-10 T 14-10-2018 IPR000182 GNAT domain D172_002645 f47c16d0a401a10c59783d0a8ec36ccb 133 Gene3D G3DSA:3.40.630.30 4 110 1.6E-11 T 14-10-2018 D172_002645 f47c16d0a401a10c59783d0a8ec36ccb 133 SUPERFAMILY SSF55729 15 112 1.24E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 55.572 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 2.6E-153 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 Pfam PF02540 NAD synthase 216 286 4.6E-7 T 14-10-2018 IPR022310 NAD/GMP synthase D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 1.1E-81 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 SUPERFAMILY SSF54810 405 525 1.57E-49 T 14-10-2018 D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 SUPERFAMILY SSF52317 8 237 3.36E-56 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 Gene3D G3DSA:3.30.300.10 406 525 8.7E-50 T 14-10-2018 D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 Pfam PF00958 GMP synthase C terminal domain 433 524 2.1E-42 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 9.1E-6 T 14-10-2018 D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 9.1E-6 T 14-10-2018 D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 9.1E-6 T 14-10-2018 D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 1.9E-6 T 14-10-2018 D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 1.9E-6 T 14-10-2018 D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 1.9E-6 T 14-10-2018 D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.3E-7 T 14-10-2018 D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.3E-7 T 14-10-2018 D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.3E-7 T 14-10-2018 D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 2.9E-41 T 14-10-2018 IPR017926 Glutamine amidotransferase D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 Gene3D G3DSA:3.40.50.880 9 206 7.3E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 SUPERFAMILY SSF52402 197 420 1.52E-57 T 14-10-2018 D172_004435 e68b54a4e0388d2f24e047df5ea35a5f 525 Gene3D G3DSA:3.40.50.620 209 405 2.5E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_017665 87519daefeb717f24d3e4d1092c3e9cd 194 Gene3D G3DSA:1.25.40.10 40 194 1.1E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_017665 87519daefeb717f24d3e4d1092c3e9cd 194 SUPERFAMILY SSF81901 54 166 1.06E-5 T 14-10-2018 D172_003735 92289599c85040185fdb497a5f1525f7 440 Gene3D G3DSA:3.90.230.10 174 440 2.5E-99 T 14-10-2018 D172_003735 92289599c85040185fdb497a5f1525f7 440 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 349 361 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site D172_003735 92289599c85040185fdb497a5f1525f7 440 PRINTS PR00599 Methionine aminopeptidase-1 signature 254 270 3.8E-5 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D172_003735 92289599c85040185fdb497a5f1525f7 440 PRINTS PR00599 Methionine aminopeptidase-1 signature 372 384 3.8E-5 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 D172_003735 92289599c85040185fdb497a5f1525f7 440 Pfam PF00557 Metallopeptidase family M24 182 413 3.8E-61 T 14-10-2018 IPR000994 Peptidase M24 D172_003735 92289599c85040185fdb497a5f1525f7 440 Gene3D G3DSA:3.40.350.10 4 172 1.9E-57 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal D172_003735 92289599c85040185fdb497a5f1525f7 440 SUPERFAMILY SSF53092 5 175 1.74E-51 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal D172_003735 92289599c85040185fdb497a5f1525f7 440 SMART SM01011 4 137 7.8E-60 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 D172_003735 92289599c85040185fdb497a5f1525f7 440 Pfam PF05195 Aminopeptidase P, N-terminal domain 9 127 6.3E-39 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 D172_003735 92289599c85040185fdb497a5f1525f7 440 SUPERFAMILY SSF55920 176 436 7.85E-86 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like D172_006180 98e40b281f592e371618a5dc91063850 452 Gene3D G3DSA:3.30.450.170 26 145 2.2E-29 T 14-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily D172_006180 98e40b281f592e371618a5dc91063850 452 Pfam PF00672 HAMP domain 173 224 3.2E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_006180 98e40b281f592e371618a5dc91063850 452 SUPERFAMILY SSF55874 285 450 1.57E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_006180 98e40b281f592e371618a5dc91063850 452 SUPERFAMILY SSF47384 212 296 1.04E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_006180 98e40b281f592e371618a5dc91063850 452 Gene3D G3DSA:1.10.287.130 177 297 6.5E-25 T 14-10-2018 D172_006180 98e40b281f592e371618a5dc91063850 452 SMART SM00304 173 228 5.5E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_006180 98e40b281f592e371618a5dc91063850 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 295 3.6E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_006180 98e40b281f592e371618a5dc91063850 452 SUPERFAMILY SSF158472 173 225 2.62E-7 T 14-10-2018 D172_006180 98e40b281f592e371618a5dc91063850 452 Pfam PF16750 Sensor domain of 2-component histidine kinase 38 144 4.7E-28 T 14-10-2018 IPR031930 2-component histidine kinase, sensor domain D172_006180 98e40b281f592e371618a5dc91063850 452 SMART SM00388 229 296 9.6E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_006180 98e40b281f592e371618a5dc91063850 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 450 2.0E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_006180 98e40b281f592e371618a5dc91063850 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 9.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_006180 98e40b281f592e371618a5dc91063850 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 405 9.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_006180 98e40b281f592e371618a5dc91063850 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 9.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_006180 98e40b281f592e371618a5dc91063850 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 9.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_006180 98e40b281f592e371618a5dc91063850 452 SMART SM00387 340 452 5.7E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_006180 98e40b281f592e371618a5dc91063850 452 Gene3D G3DSA:3.30.565.10 305 451 4.6E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_001880 02fde480cbde033105cda04e3a7beba4 101 Pfam PF05164 Cell division protein ZapA 9 92 6.0E-22 T 14-10-2018 IPR007838 Cell division protein ZapA-like D172_001880 02fde480cbde033105cda04e3a7beba4 101 SUPERFAMILY SSF102829 8 93 4.18E-20 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily D172_001880 02fde480cbde033105cda04e3a7beba4 101 Gene3D G3DSA:1.10.20.30 1 50 5.8E-11 T 14-10-2018 D172_014015 5768d14ae616709898c342939504e505 451 SUPERFAMILY SSF53623 96 306 2.49E-48 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D172_014015 5768d14ae616709898c342939504e505 451 Gene3D G3DSA:3.90.190.20 312 446 8.6E-26 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D172_014015 5768d14ae616709898c342939504e505 451 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 445 55.712 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 D172_014015 5768d14ae616709898c342939504e505 451 Pfam PF08245 Mur ligase middle domain 108 289 4.7E-19 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D172_014015 5768d14ae616709898c342939504e505 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 384 4.1E-10 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 D172_014015 5768d14ae616709898c342939504e505 451 SUPERFAMILY SSF51984 1 90 2.09E-24 T 14-10-2018 D172_014015 5768d14ae616709898c342939504e505 451 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 444 1.3E-219 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 D172_014015 5768d14ae616709898c342939504e505 451 SUPERFAMILY SSF53244 309 442 1.19E-34 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D172_014015 5768d14ae616709898c342939504e505 451 Gene3D G3DSA:3.40.1190.10 93 308 5.8E-52 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D172_014015 5768d14ae616709898c342939504e505 451 Pfam PF01225 Mur ligase family, catalytic domain 2 97 4.1E-18 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 D172_014015 5768d14ae616709898c342939504e505 451 Gene3D G3DSA:3.40.50.720 1 90 3.2E-37 T 14-10-2018 D172_012970 a70528c2a3d9915cc33e8ca92a2916bc 557 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 36 546 7.3E-145 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 D172_012970 a70528c2a3d9915cc33e8ca92a2916bc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 370 388 8.0E-70 T 14-10-2018 D172_012970 a70528c2a3d9915cc33e8ca92a2916bc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 55 80 8.0E-70 T 14-10-2018 D172_012970 a70528c2a3d9915cc33e8ca92a2916bc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 145 164 8.0E-70 T 14-10-2018 D172_012970 a70528c2a3d9915cc33e8ca92a2916bc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 394 412 8.0E-70 T 14-10-2018 D172_012970 a70528c2a3d9915cc33e8ca92a2916bc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 435 450 8.0E-70 T 14-10-2018 D172_012970 a70528c2a3d9915cc33e8ca92a2916bc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 242 258 8.0E-70 T 14-10-2018 D172_012970 a70528c2a3d9915cc33e8ca92a2916bc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 127 145 8.0E-70 T 14-10-2018 D172_012970 a70528c2a3d9915cc33e8ca92a2916bc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 272 291 8.0E-70 T 14-10-2018 D172_012970 a70528c2a3d9915cc33e8ca92a2916bc 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 459 476 8.0E-70 T 14-10-2018 D172_012970 a70528c2a3d9915cc33e8ca92a2916bc 557 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 370 394 - T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 D172_012970 a70528c2a3d9915cc33e8ca92a2916bc 557 Gene3D G3DSA:1.10.246.130 258 371 1.6E-30 T 14-10-2018 D172_012970 a70528c2a3d9915cc33e8ca92a2916bc 557 SUPERFAMILY SSF56235 31 547 1.76E-154 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_012970 a70528c2a3d9915cc33e8ca92a2916bc 557 Gene3D G3DSA:3.60.20.40 372 549 1.3E-59 T 14-10-2018 D172_012970 a70528c2a3d9915cc33e8ca92a2916bc 557 Pfam PF01019 Gamma-glutamyltranspeptidase 48 549 1.6E-153 T 14-10-2018 D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 Gene3D G3DSA:2.130.10.10 25 269 3.6E-28 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 SUPERFAMILY SSF63829 508 664 5.56E-10 T 14-10-2018 D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 Gene3D G3DSA:3.30.70.270 1073 1247 5.9E-55 T 14-10-2018 D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 SUPERFAMILY SSF55073 1079 1237 1.1E-42 T 14-10-2018 IPR029787 Nucleotide cyclase D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 Gene3D G3DSA:3.30.450.20 841 943 1.2E-13 T 14-10-2018 D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 Gene3D G3DSA:2.130.10.10 349 657 1.1E-42 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 SUPERFAMILY SSF141868 1250 1491 7.06E-79 T 14-10-2018 IPR035919 EAL domain superfamily D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 SMART SM00052 1245 1489 1.1E-94 T 14-10-2018 IPR001633 EAL domain D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 SUPERFAMILY SSF55785 959 1071 2.62E-5 T 14-10-2018 IPR035965 PAS domain superfamily D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 Pfam PF07494 Two component regulator propeller 348 369 0.0046 T 14-10-2018 IPR011110 Two component regulator propeller D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 SUPERFAMILY SSF55785 863 941 8.95E-11 T 14-10-2018 IPR035965 PAS domain superfamily D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1074 1230 4.4E-42 T 14-10-2018 IPR000160 GGDEF domain D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 Gene3D G3DSA:3.30.450.20 950 1072 9.3E-7 T 14-10-2018 D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 Gene3D G3DSA:2.60.40.10 658 778 1.7E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 Pfam PF00563 EAL domain 1251 1484 1.9E-65 T 14-10-2018 IPR001633 EAL domain D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 SUPERFAMILY SSF50998 50 441 2.43E-10 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1072 1233 5.9E-36 T 14-10-2018 IPR000160 GGDEF domain D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 SMART SM00267 1063 1235 2.3E-53 T 14-10-2018 IPR000160 GGDEF domain D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 SMART SM00086 1024 1063 230.0 T 14-10-2018 IPR001610 PAC motif D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 SMART SM00086 897 940 8.8E-4 T 14-10-2018 IPR001610 PAC motif D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 Pfam PF08447 PAS fold 861 933 1.7E-9 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 Gene3D G3DSA:2.130.10.10 275 348 1.2E-5 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_018590 3cbfff245ab7f07aeef6c7e6be9c1ea8 1503 Gene3D G3DSA:3.20.20.450 1248 1495 1.7E-85 T 14-10-2018 IPR035919 EAL domain superfamily D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 Gene3D G3DSA:3.30.65.10 753 815 2.9E-31 T 14-10-2018 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 Gene3D G3DSA:3.30.65.10 706 752 4.6E-6 T 14-10-2018 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 643 1.3E-244 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 740 54.694 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 SUPERFAMILY SSF56712 3 618 5.36E-199 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 SUPERFAMILY SSF57783 817 872 1.09E-21 T 14-10-2018 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 SUPERFAMILY SSF57783 708 751 2.38E-6 T 14-10-2018 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 717 753 3.5E-10 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 606 631 1.0E-4 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 Pfam PF08272 Topoisomerase I zinc-ribbon-like 832 871 9.1E-20 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 Pfam PF08272 Topoisomerase I zinc-ribbon-like 768 801 1.9E-11 T 14-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 331 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 Gene3D G3DSA:1.10.460.10 174 580 3.8E-161 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 1.7E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 115 128 1.7E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 200 218 1.7E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 499 513 1.7E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 398 414 1.7E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 Gene3D G3DSA:1.10.290.10 288 412 3.8E-161 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 SUPERFAMILY SSF57783 752 815 7.48E-19 T 14-10-2018 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 Gene3D G3DSA:3.40.50.140 1 172 7.5E-66 T 14-10-2018 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 Pfam PF01751 Toprim domain 5 151 2.9E-31 T 14-10-2018 IPR006171 TOPRIM domain D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 Gene3D G3DSA:2.20.25.10 816 874 1.2E-26 T 14-10-2018 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 SMART SM00437 280 536 3.1E-120 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 SMART SM00436 142 230 3.1E-46 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 Pfam PF01131 DNA topoisomerase 166 574 8.1E-127 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 Gene3D G3DSA:2.70.20.10 222 482 3.8E-161 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 D172_009870 9dd736725f96c799ee3e8c73977ddd28 902 SMART SM00493 3 141 1.0E-28 T 14-10-2018 IPR006171 TOPRIM domain D172_001735 b5eef13b1c9b81415c3634db5eb6b5d6 429 Gene3D G3DSA:3.40.50.11060 19 138 1.2E-37 T 14-10-2018 D172_001735 b5eef13b1c9b81415c3634db5eb6b5d6 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.253 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 D172_001735 b5eef13b1c9b81415c3634db5eb6b5d6 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 360 3.9E-154 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 D172_001735 b5eef13b1c9b81415c3634db5eb6b5d6 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 4.1E-28 T 14-10-2018 IPR032305 GTP-binding protein, middle domain D172_001735 b5eef13b1c9b81415c3634db5eb6b5d6 429 PIRSF PIRSF006809 3 418 1.1E-143 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 D172_001735 b5eef13b1c9b81415c3634db5eb6b5d6 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 5.0E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_001735 b5eef13b1c9b81415c3634db5eb6b5d6 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 5.0E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_001735 b5eef13b1c9b81415c3634db5eb6b5d6 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 5.0E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_001735 b5eef13b1c9b81415c3634db5eb6b5d6 429 SUPERFAMILY SSF52540 197 377 1.19E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_001735 b5eef13b1c9b81415c3634db5eb6b5d6 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 8.9E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_001735 b5eef13b1c9b81415c3634db5eb6b5d6 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 2.5E-30 T 14-10-2018 IPR025121 GTPase HflX, N-terminal D172_001735 b5eef13b1c9b81415c3634db5eb6b5d6 429 SUPERFAMILY SSF54980 375 426 3.52E-11 T 14-10-2018 IPR035647 EF-G domain III/V-like D172_001735 b5eef13b1c9b81415c3634db5eb6b5d6 429 Gene3D G3DSA:3.40.50.300 197 369 7.0E-40 T 14-10-2018 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 SUPERFAMILY SSF48113 434 725 1.28E-105 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 Gene3D G3DSA:1.10.520.10 430 725 1.8E-139 T 14-10-2018 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 SUPERFAMILY SSF48113 15 428 4.42E-147 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 Gene3D G3DSA:1.10.520.10 19 429 3.0E-216 T 14-10-2018 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 8 725 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 ProSitePatterns PS00436 Peroxidases active site signature. 87 98 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 23 45 7.3E-54 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 49 62 7.3E-54 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 64 89 7.3E-54 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 7.3E-54 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 264 287 7.3E-54 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 Gene3D G3DSA:1.10.420.10 580 701 1.8E-139 T 14-10-2018 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 Hamap MF_01961 Catalase-peroxidase [katG]. 4 726 39.515 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 PRINTS PR00458 Haem peroxidase superfamily signature 315 330 4.5E-16 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 PRINTS PR00458 Haem peroxidase superfamily signature 165 177 4.5E-16 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 PRINTS PR00458 Haem peroxidase superfamily signature 256 271 4.5E-16 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 PRINTS PR00458 Haem peroxidase superfamily signature 147 164 4.5E-16 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 PRINTS PR00458 Haem peroxidase superfamily signature 87 101 4.5E-16 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 Pfam PF00141 Peroxidase 403 700 5.9E-37 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 Pfam PF00141 Peroxidase 77 395 1.8E-47 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 D172_020760 dfa1d860e09f9ada08578312b1d48bf2 726 Gene3D G3DSA:1.10.420.20 188 396 3.0E-216 T 14-10-2018 D172_007855 4c0a152ad59e120983cbf31fdced216b 740 SUPERFAMILY SSF53659 3 739 0.0 T 14-10-2018 D172_007855 4c0a152ad59e120983cbf31fdced216b 740 PIRSF PIRSF009407 1 740 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 D172_007855 4c0a152ad59e120983cbf31fdced216b 740 Gene3D G3DSA:3.40.718.10 400 647 3.4E-10 T 14-10-2018 D172_007855 4c0a152ad59e120983cbf31fdced216b 740 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 3 739 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 D172_007855 4c0a152ad59e120983cbf31fdced216b 740 Pfam PF03971 Monomeric isocitrate dehydrogenase 4 736 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 D172_012845 8a91dbc1193de885eda5664b71d7ac5e 163 SUPERFAMILY SSF50891 1 162 4.68E-56 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily D172_012845 8a91dbc1193de885eda5664b71d7ac5e 163 Gene3D G3DSA:2.40.100.10 1 163 6.9E-65 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily D172_012845 8a91dbc1193de885eda5664b71d7ac5e 163 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 D172_012845 8a91dbc1193de885eda5664b71d7ac5e 163 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 1.4E-44 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D172_012845 8a91dbc1193de885eda5664b71d7ac5e 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.0E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D172_012845 8a91dbc1193de885eda5664b71d7ac5e 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.0E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D172_012845 8a91dbc1193de885eda5664b71d7ac5e 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.0E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D172_012845 8a91dbc1193de885eda5664b71d7ac5e 163 PIRSF PIRSF001467 1 163 1.0E-26 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 D172_004795 5c526e211053f66063306a19ac7c1e49 742 SUPERFAMILY SSF55874 294 461 8.25E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_004795 5c526e211053f66063306a19ac7c1e49 742 SUPERFAMILY SSF52172 492 608 3.56E-30 T 14-10-2018 IPR011006 CheY-like superfamily D172_004795 5c526e211053f66063306a19ac7c1e49 742 SMART SM00448 491 604 1.4E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004795 5c526e211053f66063306a19ac7c1e49 742 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 1.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004795 5c526e211053f66063306a19ac7c1e49 742 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 1.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004795 5c526e211053f66063306a19ac7c1e49 742 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 1.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004795 5c526e211053f66063306a19ac7c1e49 742 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 1.6E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004795 5c526e211053f66063306a19ac7c1e49 742 Gene3D G3DSA:1.20.1480.50 134 228 8.5E-12 T 14-10-2018 D172_004795 5c526e211053f66063306a19ac7c1e49 742 SMART SM00304 172 224 8.0E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_004795 5c526e211053f66063306a19ac7c1e49 742 SUPERFAMILY SSF47384 224 307 1.06E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_004795 5c526e211053f66063306a19ac7c1e49 742 SMART SM00387 353 465 1.7E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_004795 5c526e211053f66063306a19ac7c1e49 742 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 461 1.2E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_004795 5c526e211053f66063306a19ac7c1e49 742 Gene3D G3DSA:1.10.287.130 229 303 7.0E-22 T 14-10-2018 D172_004795 5c526e211053f66063306a19ac7c1e49 742 Pfam PF00672 HAMP domain 173 218 6.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_004795 5c526e211053f66063306a19ac7c1e49 742 Pfam PF01627 Hpt domain 653 730 1.0E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D172_004795 5c526e211053f66063306a19ac7c1e49 742 Pfam PF00072 Response regulator receiver domain 493 602 6.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004795 5c526e211053f66063306a19ac7c1e49 742 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 305 2.5E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_004795 5c526e211053f66063306a19ac7c1e49 742 SUPERFAMILY SSF47226 587 721 4.71E-19 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_004795 5c526e211053f66063306a19ac7c1e49 742 Gene3D G3DSA:1.20.120.160 619 742 1.1E-16 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_004795 5c526e211053f66063306a19ac7c1e49 742 SUPERFAMILY SSF158472 172 220 4.32E-8 T 14-10-2018 D172_004795 5c526e211053f66063306a19ac7c1e49 742 SMART SM00388 239 305 9.2E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_004795 5c526e211053f66063306a19ac7c1e49 742 Gene3D G3DSA:3.30.565.10 304 463 6.8E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_004795 5c526e211053f66063306a19ac7c1e49 742 Gene3D G3DSA:3.40.50.2300 489 608 8.3E-32 T 14-10-2018 D172_005035 aed45070cb5b6a835e783558a88b5e5e 315 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 40.466 T 14-10-2018 IPR033752 MetA family D172_005035 aed45070cb5b6a835e783558a88b5e5e 315 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 3.0E-142 T 14-10-2018 D172_005035 aed45070cb5b6a835e783558a88b5e5e 315 PIRSF PIRSF000450 1 309 4.6E-133 T 14-10-2018 IPR033752 MetA family D172_005035 aed45070cb5b6a835e783558a88b5e5e 315 Gene3D G3DSA:3.40.50.880 1 301 3.1E-123 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_005035 aed45070cb5b6a835e783558a88b5e5e 315 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 6.1E-125 T 14-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 D172_005035 aed45070cb5b6a835e783558a88b5e5e 315 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.9E-126 T 14-10-2018 IPR033752 MetA family D172_005035 aed45070cb5b6a835e783558a88b5e5e 315 SUPERFAMILY SSF52317 17 297 1.43E-92 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_003305 c1d626253bd6e5509b15f91cd81bbfa3 244 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_003305 c1d626253bd6e5509b15f91cd81bbfa3 244 Pfam PF00005 ABC transporter 25 173 7.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_003305 c1d626253bd6e5509b15f91cd81bbfa3 244 SMART SM00382 34 228 3.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_003305 c1d626253bd6e5509b15f91cd81bbfa3 244 SUPERFAMILY SSF52540 5 227 2.03E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_003305 c1d626253bd6e5509b15f91cd81bbfa3 244 Gene3D G3DSA:3.40.50.300 3 239 4.2E-62 T 14-10-2018 D172_016260 44eaa5a8d8a57a1b172ead2f850eba68 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 104 5.7E-38 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_016260 44eaa5a8d8a57a1b172ead2f850eba68 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 98 19.599 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_016260 44eaa5a8d8a57a1b172ead2f850eba68 104 SMART SM00739 4 31 4.8E-4 T 14-10-2018 IPR005824 KOW D172_016260 44eaa5a8d8a57a1b172ead2f850eba68 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 104 6.5E-23 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_016260 44eaa5a8d8a57a1b172ead2f850eba68 104 Gene3D G3DSA:2.30.30.30 2 104 2.6E-38 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 D172_016260 44eaa5a8d8a57a1b172ead2f850eba68 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_016260 44eaa5a8d8a57a1b172ead2f850eba68 104 SUPERFAMILY SSF50104 4 102 1.32E-33 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily D172_016260 44eaa5a8d8a57a1b172ead2f850eba68 104 Pfam PF00467 KOW motif 8 38 4.1E-6 T 14-10-2018 IPR005824 KOW D172_001375 006c4e2163b5da4bb965cee9abfc2cd6 334 Gene3D G3DSA:3.40.50.720 1 123 5.3E-34 T 14-10-2018 D172_001375 006c4e2163b5da4bb965cee9abfc2cd6 334 SUPERFAMILY SSF51735 3 172 7.48E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_001375 006c4e2163b5da4bb965cee9abfc2cd6 334 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 120 6.7E-24 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 D172_001375 006c4e2163b5da4bb965cee9abfc2cd6 334 SUPERFAMILY SSF55347 127 291 1.59E-35 T 14-10-2018 D172_001375 006c4e2163b5da4bb965cee9abfc2cd6 334 Gene3D G3DSA:3.30.360.10 124 327 5.2E-51 T 14-10-2018 D172_017115 2a104a383896031c5919dfbc9c7b79a9 309 Pfam PF00892 EamA-like transporter family 150 286 1.7E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_017115 2a104a383896031c5919dfbc9c7b79a9 309 Pfam PF00892 EamA-like transporter family 4 135 4.0E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_017115 2a104a383896031c5919dfbc9c7b79a9 309 SUPERFAMILY SSF103481 36 139 3.53E-13 T 14-10-2018 D172_017115 2a104a383896031c5919dfbc9c7b79a9 309 SUPERFAMILY SSF103481 194 289 1.02E-10 T 14-10-2018 D172_003110 02e4658164b8f3810102f8927e3a021a 324 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 324 53.086 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 D172_003110 02e4658164b8f3810102f8927e3a021a 324 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 15 319 3.9E-130 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 D172_003110 02e4658164b8f3810102f8927e3a021a 324 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 319 8.0E-43 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_003110 02e4658164b8f3810102f8927e3a021a 324 Gene3D G3DSA:3.30.930.10 1 324 4.3E-112 T 14-10-2018 D172_003110 02e4658164b8f3810102f8927e3a021a 324 SUPERFAMILY SSF55681 4 319 5.18E-79 T 14-10-2018 D172_003110 02e4658164b8f3810102f8927e3a021a 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 30 40 3.8E-5 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D172_003110 02e4658164b8f3810102f8927e3a021a 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 98 115 3.8E-5 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D172_019740 d653e87a866799675fd9089c93753a1a 423 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 420 1.2E-135 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D172_019740 d653e87a866799675fd9089c93753a1a 423 Gene3D G3DSA:3.40.640.10 1 285 5.4E-96 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_019740 d653e87a866799675fd9089c93753a1a 423 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 8.6E-190 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 D172_019740 d653e87a866799675fd9089c93753a1a 423 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D172_019740 d653e87a866799675fd9089c93753a1a 423 Gene3D G3DSA:3.90.1150.10 289 423 3.5E-48 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_019740 d653e87a866799675fd9089c93753a1a 423 SUPERFAMILY SSF53383 1 421 1.32E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_019740 d653e87a866799675fd9089c93753a1a 423 PIRSF PIRSF001434 1 423 1.3E-122 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 174 1.2E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 Pfam PF03764 Elongation factor G, domain IV 475 593 2.3E-42 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 Gene3D G3DSA:2.40.30.10 291 412 9.8E-43 T 14-10-2018 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 SMART SM00889 476 594 4.2E-59 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 Gene3D G3DSA:3.30.70.870 429 479 9.6E-20 T 14-10-2018 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 688 5.6E-288 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 Gene3D G3DSA:3.40.50.300 1 290 3.0E-99 T 14-10-2018 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 Pfam PF00009 Elongation factor Tu GTP binding domain 6 278 3.3E-61 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 Pfam PF03144 Elongation factor Tu domain 2 320 387 2.4E-15 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 Gene3D G3DSA:3.30.70.240 600 670 1.9E-81 T 14-10-2018 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 Gene3D G3DSA:3.30.230.10 480 683 1.9E-81 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 Pfam PF14492 Elongation Factor G, domain II 400 474 4.2E-28 T 14-10-2018 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 SUPERFAMILY SSF54980 599 687 1.83E-28 T 14-10-2018 IPR035647 EF-G domain III/V-like D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 SUPERFAMILY SSF54211 475 594 1.44E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 Pfam PF00679 Elongation factor G C-terminus 596 682 2.5E-27 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 SUPERFAMILY SSF52540 3 278 6.66E-98 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 PRINTS PR00315 GTP-binding elongation factor signature 75 85 4.7E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 PRINTS PR00315 GTP-binding elongation factor signature 55 63 4.7E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 PRINTS PR00315 GTP-binding elongation factor signature 9 22 4.7E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 PRINTS PR00315 GTP-binding elongation factor signature 127 136 4.7E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 SMART SM00838 596 683 2.4E-46 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 SUPERFAMILY SSF50447 261 398 1.72E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 Hamap MF_00054_B Elongation factor G [fusA]. 3 687 100.377 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D172_016985 2f6dd51384dd8895ac0028dd1716bc94 694 SUPERFAMILY SSF54980 400 477 1.12E-20 T 14-10-2018 IPR035647 EF-G domain III/V-like D172_001000 02e5ed2990463e1d8969e87a0b261f9a 403 Pfam PF00563 EAL domain 147 382 1.3E-56 T 14-10-2018 IPR001633 EAL domain D172_001000 02e5ed2990463e1d8969e87a0b261f9a 403 Gene3D G3DSA:3.40.50.2300 5 137 3.5E-24 T 14-10-2018 D172_001000 02e5ed2990463e1d8969e87a0b261f9a 403 Gene3D G3DSA:3.20.20.450 141 397 8.1E-65 T 14-10-2018 IPR035919 EAL domain superfamily D172_001000 02e5ed2990463e1d8969e87a0b261f9a 403 SMART SM00448 6 126 1.5E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_001000 02e5ed2990463e1d8969e87a0b261f9a 403 SMART SM00052 140 387 2.8E-60 T 14-10-2018 IPR001633 EAL domain D172_001000 02e5ed2990463e1d8969e87a0b261f9a 403 SUPERFAMILY SSF141868 146 397 3.4E-63 T 14-10-2018 IPR035919 EAL domain superfamily D172_001000 02e5ed2990463e1d8969e87a0b261f9a 403 Pfam PF00072 Response regulator receiver domain 8 126 1.2E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_001000 02e5ed2990463e1d8969e87a0b261f9a 403 SUPERFAMILY SSF52172 7 132 4.41E-22 T 14-10-2018 IPR011006 CheY-like superfamily D172_006015 8c0760a44b7708c4d339eae49a433b7c 231 Pfam PF13661 2OG-Fe(II) oxygenase superfamily 137 228 3.1E-25 T 14-10-2018 IPR039558 Prolyl 3,4-dihydroxylase TPA1/OFD1, N-terminal domain D172_006015 8c0760a44b7708c4d339eae49a433b7c 231 SMART SM00702 40 229 9.9E-4 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 D172_006015 8c0760a44b7708c4d339eae49a433b7c 231 Gene3D G3DSA:2.60.120.620 6 231 9.1E-34 T 14-10-2018 D172_007875 17676af884e1288c548127bc073e3dc1 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 3.1E-38 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 D172_007875 17676af884e1288c548127bc073e3dc1 72 Gene3D G3DSA:2.40.50.140 1 72 9.5E-37 T 14-10-2018 D172_007875 17676af884e1288c548127bc073e3dc1 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.374 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 D172_007875 17676af884e1288c548127bc073e3dc1 72 SUPERFAMILY SSF50249 1 70 1.15E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_007875 17676af884e1288c548127bc073e3dc1 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.7E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 D172_007875 17676af884e1288c548127bc073e3dc1 72 SMART SM00316 4 72 1.9E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 D172_004245 e111e8ee4e6cb07f5cfa02f558713d9b 448 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site D172_004245 e111e8ee4e6cb07f5cfa02f558713d9b 448 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D172_004245 e111e8ee4e6cb07f5cfa02f558713d9b 448 SUPERFAMILY SSF52540 139 383 1.85E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_004245 e111e8ee4e6cb07f5cfa02f558713d9b 448 SUPERFAMILY SSF46689 392 443 4.48E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_004245 e111e8ee4e6cb07f5cfa02f558713d9b 448 Pfam PF00072 Response regulator receiver domain 11 119 4.6E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004245 e111e8ee4e6cb07f5cfa02f558713d9b 448 SMART SM00448 9 120 2.5E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004245 e111e8ee4e6cb07f5cfa02f558713d9b 448 Gene3D G3DSA:3.40.50.300 132 311 2.4E-61 T 14-10-2018 D172_004245 e111e8ee4e6cb07f5cfa02f558713d9b 448 Gene3D G3DSA:1.10.10.60 389 446 4.3E-12 T 14-10-2018 D172_004245 e111e8ee4e6cb07f5cfa02f558713d9b 448 Pfam PF00158 Sigma-54 interaction domain 140 306 1.1E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D172_004245 e111e8ee4e6cb07f5cfa02f558713d9b 448 Gene3D G3DSA:3.40.50.2300 2 131 5.3E-36 T 14-10-2018 D172_004245 e111e8ee4e6cb07f5cfa02f558713d9b 448 Gene3D G3DSA:1.10.8.60 312 388 6.3E-24 T 14-10-2018 D172_004245 e111e8ee4e6cb07f5cfa02f558713d9b 448 SMART SM00382 160 303 3.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_004245 e111e8ee4e6cb07f5cfa02f558713d9b 448 SUPERFAMILY SSF52172 8 185 9.25E-43 T 14-10-2018 IPR011006 CheY-like superfamily D172_010935 73e3cb615d32aa716da43d9550c32f89 471 SUPERFAMILY SSF46548 7 157 1.15E-39 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D172_010935 73e3cb615d32aa716da43d9550c32f89 471 SUPERFAMILY SSF51971 145 400 1.29E-68 T 14-10-2018 D172_010935 73e3cb615d32aa716da43d9550c32f89 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 458 5.4E-25 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D172_010935 73e3cb615d32aa716da43d9550c32f89 471 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 471 1.6E-245 T 14-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 D172_010935 73e3cb615d32aa716da43d9550c32f89 471 Gene3D G3DSA:3.50.50.60 147 211 4.7E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_010935 73e3cb615d32aa716da43d9550c32f89 471 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 8.8E-36 T 14-10-2018 D172_010935 73e3cb615d32aa716da43d9550c32f89 471 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 8.8E-36 T 14-10-2018 D172_010935 73e3cb615d32aa716da43d9550c32f89 471 PRINTS PR00419 Adrenodoxin reductase family signature 323 336 8.8E-36 T 14-10-2018 D172_010935 73e3cb615d32aa716da43d9550c32f89 471 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 8.8E-36 T 14-10-2018 D172_010935 73e3cb615d32aa716da43d9550c32f89 471 PRINTS PR00419 Adrenodoxin reductase family signature 289 303 8.8E-36 T 14-10-2018 D172_010935 73e3cb615d32aa716da43d9550c32f89 471 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 134 3.3E-38 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 D172_010935 73e3cb615d32aa716da43d9550c32f89 471 Gene3D G3DSA:1.10.1060.10 10 146 7.7E-35 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D172_010935 73e3cb615d32aa716da43d9550c32f89 471 Gene3D G3DSA:3.50.50.60 245 399 2.6E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_014665 d7fe602ac38d5ffd320738908a12d38d 285 SMART SM00849 40 207 2.1E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_014665 d7fe602ac38d5ffd320738908a12d38d 285 Pfam PF00753 Metallo-beta-lactamase superfamily 42 207 5.8E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_014665 d7fe602ac38d5ffd320738908a12d38d 285 Gene3D G3DSA:3.60.15.10 24 233 8.6E-36 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_014665 d7fe602ac38d5ffd320738908a12d38d 285 SUPERFAMILY SSF56281 14 260 1.54E-37 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_010270 01f888f5dfae1cef1c3a27e9a7d8b398 430 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 21 427 2.2E-114 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 D172_010270 01f888f5dfae1cef1c3a27e9a7d8b398 430 SUPERFAMILY SSF109604 17 429 4.26E-74 T 14-10-2018 D172_010270 01f888f5dfae1cef1c3a27e9a7d8b398 430 SMART SM00471 54 255 7.8E-10 T 14-10-2018 IPR003607 HD/PDEase domain D172_010270 01f888f5dfae1cef1c3a27e9a7d8b398 430 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 426 32.749 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 D172_010270 01f888f5dfae1cef1c3a27e9a7d8b398 430 Pfam PF01966 HD domain 58 142 4.0E-10 T 14-10-2018 IPR006674 HD domain D172_010270 01f888f5dfae1cef1c3a27e9a7d8b398 430 Gene3D G3DSA:1.10.3210.10 2 427 1.3E-102 T 14-10-2018 D172_010270 01f888f5dfae1cef1c3a27e9a7d8b398 430 Pfam PF13286 Phosphohydrolase-associated domain 335 424 2.6E-24 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain D172_002910 6c57f8f1a1f3ae6070cf1e4a4799453d 286 Pfam PF01497 Periplasmic binding protein 31 254 1.2E-31 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain D172_002910 6c57f8f1a1f3ae6070cf1e4a4799453d 286 Gene3D G3DSA:3.40.50.1980 28 145 4.8E-33 T 14-10-2018 D172_002910 6c57f8f1a1f3ae6070cf1e4a4799453d 286 Gene3D G3DSA:3.40.50.1980 148 276 1.1E-29 T 14-10-2018 D172_002910 6c57f8f1a1f3ae6070cf1e4a4799453d 286 SUPERFAMILY SSF53807 23 275 7.46E-60 T 14-10-2018 D172_016640 5bbcbbf39d94b265a834858eba81c964 393 Gene3D G3DSA:2.40.30.10 153 256 1.6E-31 T 14-10-2018 D172_016640 5bbcbbf39d94b265a834858eba81c964 393 Pfam PF00970 Oxidoreductase FAD-binding domain 157 256 1.3E-8 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 D172_016640 5bbcbbf39d94b265a834858eba81c964 393 Pfam PF00175 Oxidoreductase NAD-binding domain 267 369 8.6E-14 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D172_016640 5bbcbbf39d94b265a834858eba81c964 393 SUPERFAMILY SSF63380 150 257 1.09E-22 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D172_016640 5bbcbbf39d94b265a834858eba81c964 393 Gene3D G3DSA:1.10.490.10 1 145 1.5E-54 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 D172_016640 5bbcbbf39d94b265a834858eba81c964 393 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 1.3E-8 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D172_016640 5bbcbbf39d94b265a834858eba81c964 393 PRINTS PR00410 Phenol hydroxylase reductase family signature 266 285 1.3E-8 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D172_016640 5bbcbbf39d94b265a834858eba81c964 393 PRINTS PR00410 Phenol hydroxylase reductase family signature 251 260 1.3E-8 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D172_016640 5bbcbbf39d94b265a834858eba81c964 393 PRINTS PR00410 Phenol hydroxylase reductase family signature 355 363 1.3E-8 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D172_016640 5bbcbbf39d94b265a834858eba81c964 393 SUPERFAMILY SSF52343 257 390 1.44E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D172_016640 5bbcbbf39d94b265a834858eba81c964 393 Gene3D G3DSA:3.40.50.80 257 392 7.5E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D172_016640 5bbcbbf39d94b265a834858eba81c964 393 Pfam PF00042 Globin 7 102 5.1E-10 T 14-10-2018 IPR000971 Globin GO:0020037 D172_016640 5bbcbbf39d94b265a834858eba81c964 393 SUPERFAMILY SSF46458 1 144 1.31E-39 T 14-10-2018 IPR009050 Globin-like superfamily D172_015250 924a672760de0a4970ca32f0f28dbb5c 391 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 381 1.8E-92 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D172_015250 924a672760de0a4970ca32f0f28dbb5c 391 PIRSF PIRSF000390 1 390 7.4E-115 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D172_015250 924a672760de0a4970ca32f0f28dbb5c 391 Gene3D G3DSA:3.40.640.10 3 256 1.8E-81 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_015250 924a672760de0a4970ca32f0f28dbb5c 391 Gene3D G3DSA:3.90.1150.10 257 389 1.6E-17 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_015250 924a672760de0a4970ca32f0f28dbb5c 391 SUPERFAMILY SSF53383 9 386 1.25E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_012365 d7b57bbee7deb9245ce018bbacb9b537 178 Pfam PF01899 Na+/H+ ion antiporter subunit 17 175 1.6E-41 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 D172_012365 d7b57bbee7deb9245ce018bbacb9b537 178 PIRSF PIRSF019239 6 178 2.5E-49 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 D172_013365 8ecb0ad5281158894263837f25198966 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 1.7E-121 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 D172_013365 8ecb0ad5281158894263837f25198966 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.8E-36 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 D172_013365 8ecb0ad5281158894263837f25198966 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.8E-36 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 D172_013365 8ecb0ad5281158894263837f25198966 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.8E-36 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 D172_013365 8ecb0ad5281158894263837f25198966 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.8E-36 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 D172_013365 8ecb0ad5281158894263837f25198966 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.8E-36 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 D172_013365 8ecb0ad5281158894263837f25198966 376 Gene3D G3DSA:3.40.1690.10 217 358 1.1E-56 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal D172_013365 8ecb0ad5281158894263837f25198966 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 352 1.0E-123 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 D172_013365 8ecb0ad5281158894263837f25198966 376 SUPERFAMILY SSF160544 244 351 4.58E-40 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal D172_002145 56bca94e27cc551b5e475a7fc773ac30 528 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 459 1.0E-119 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D172_002145 56bca94e27cc551b5e475a7fc773ac30 528 SMART SM00851 19 132 5.6E-58 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain D172_002145 56bca94e27cc551b5e475a7fc773ac30 528 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 528 9.6E-250 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D172_002145 56bca94e27cc551b5e475a7fc773ac30 528 PIRSF PIRSF000414 1 528 3.2E-227 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D172_002145 56bca94e27cc551b5e475a7fc773ac30 528 SUPERFAMILY SSF53927 220 528 8.82E-130 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 D172_002145 56bca94e27cc551b5e475a7fc773ac30 528 Gene3D G3DSA:3.40.50.1380 1 201 1.1E-84 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily D172_002145 56bca94e27cc551b5e475a7fc773ac30 528 SMART SM00798 137 460 9.0E-217 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D172_002145 56bca94e27cc551b5e475a7fc773ac30 528 Gene3D G3DSA:3.40.140.20 217 371 1.7E-57 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D172_002145 56bca94e27cc551b5e475a7fc773ac30 528 Pfam PF02142 MGS-like domain 19 132 1.3E-28 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain D172_002145 56bca94e27cc551b5e475a7fc773ac30 528 SUPERFAMILY SSF52335 7 197 1.23E-70 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily D172_002145 56bca94e27cc551b5e475a7fc773ac30 528 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 528 45.138 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D172_002145 56bca94e27cc551b5e475a7fc773ac30 528 Gene3D G3DSA:3.40.140.20 391 528 1.1E-59 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D172_010925 afe172684294c79a2e31ba084a84902d 557 PIRSF PIRSF003128 1 557 5.9E-160 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 D172_010925 afe172684294c79a2e31ba084a84902d 557 Gene3D G3DSA:3.40.50.300 275 555 4.0E-55 T 14-10-2018 D172_010925 afe172684294c79a2e31ba084a84902d 557 Gene3D G3DSA:3.40.50.300 2 274 4.6E-42 T 14-10-2018 D172_010925 afe172684294c79a2e31ba084a84902d 557 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 553 2.7E-168 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 D172_010925 afe172684294c79a2e31ba084a84902d 557 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 509 5.3E-22 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal D172_010925 afe172684294c79a2e31ba084a84902d 557 SUPERFAMILY SSF52540 1 509 1.62E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_021070 e766a09f6e57eb8ceda32f8d03fd83dd 353 Pfam PF16670 Phosphoinositide phospholipase C, Ca2+-dependent 20 347 5.7E-99 T 14-10-2018 IPR032075 Phosphoinositide phospholipase C, Ca2+-dependent D172_021070 e766a09f6e57eb8ceda32f8d03fd83dd 353 Gene3D G3DSA:3.20.20.190 57 331 3.2E-35 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 D172_021070 e766a09f6e57eb8ceda32f8d03fd83dd 353 SUPERFAMILY SSF51695 18 333 3.24E-22 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 D172_018825 461c0d2102ec27256f33f2dc676c8162 406 SUPERFAMILY SSF55920 175 396 1.31E-66 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like D172_018825 461c0d2102ec27256f33f2dc676c8162 406 Gene3D G3DSA:3.40.350.10 2 169 5.1E-42 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal D172_018825 461c0d2102ec27256f33f2dc676c8162 406 Gene3D G3DSA:3.90.230.10 170 403 1.2E-70 T 14-10-2018 D172_018825 461c0d2102ec27256f33f2dc676c8162 406 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 331 343 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site D172_018825 461c0d2102ec27256f33f2dc676c8162 406 Pfam PF00557 Metallopeptidase family M24 179 385 9.2E-54 T 14-10-2018 IPR000994 Peptidase M24 D172_018825 461c0d2102ec27256f33f2dc676c8162 406 Pfam PF01321 Creatinase/Prolidase N-terminal domain 36 170 1.8E-15 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 D172_018825 461c0d2102ec27256f33f2dc676c8162 406 SUPERFAMILY SSF53092 16 169 5.06E-23 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal D172_009210 c7f82cc4d62bf85ad65f457be46b8f76 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 3.3E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D172_009210 c7f82cc4d62bf85ad65f457be46b8f76 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 3.3E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D172_009210 c7f82cc4d62bf85ad65f457be46b8f76 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 3.3E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D172_009210 c7f82cc4d62bf85ad65f457be46b8f76 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 3.3E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D172_009210 c7f82cc4d62bf85ad65f457be46b8f76 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 3.3E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D172_009210 c7f82cc4d62bf85ad65f457be46b8f76 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 3.3E-40 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D172_009210 c7f82cc4d62bf85ad65f457be46b8f76 760 Gene3D G3DSA:3.20.70.20 78 741 2.5E-157 T 14-10-2018 D172_009210 c7f82cc4d62bf85ad65f457be46b8f76 760 SUPERFAMILY SSF48168 10 221 1.11E-70 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D172_009210 c7f82cc4d62bf85ad65f457be46b8f76 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 6.2E-12 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D172_009210 c7f82cc4d62bf85ad65f457be46b8f76 760 SUPERFAMILY SSF51998 222 740 2.29E-166 T 14-10-2018 D172_009210 c7f82cc4d62bf85ad65f457be46b8f76 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 5.5E-176 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D172_009210 c7f82cc4d62bf85ad65f457be46b8f76 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 3.7E-121 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D172_009210 c7f82cc4d62bf85ad65f457be46b8f76 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D172_009210 c7f82cc4d62bf85ad65f457be46b8f76 760 Pfam PF03477 ATP cone domain 6 92 2.3E-18 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 D172_006755 b69c71e400ac4bc8ac21c76cb753e32a 317 SMART SM01130 3 316 3.9E-30 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_006755 b69c71e400ac4bc8ac21c76cb753e32a 317 Gene3D G3DSA:3.20.20.70 1 317 1.7E-51 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_006755 b69c71e400ac4bc8ac21c76cb753e32a 317 Pfam PF00701 Dihydrodipicolinate synthetase family 5 241 6.1E-32 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_006755 b69c71e400ac4bc8ac21c76cb753e32a 317 SUPERFAMILY SSF51569 2 315 1.26E-49 T 14-10-2018 D172_006755 b69c71e400ac4bc8ac21c76cb753e32a 317 PIRSF PIRSF001365 1 256 3.2E-39 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_006755 b69c71e400ac4bc8ac21c76cb753e32a 317 PIRSF PIRSF001365 257 317 0.0032 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_012165 c43b808c89e4c9db7fc005785362cde6 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 2.1E-45 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 D172_012165 c43b808c89e4c9db7fc005785362cde6 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.295 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 D172_012165 c43b808c89e4c9db7fc005785362cde6 156 PIRSF PIRSF004505 1 155 2.9E-39 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 D172_012165 c43b808c89e4c9db7fc005785362cde6 156 Gene3D G3DSA:3.40.1280.10 1 156 3.3E-49 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D172_012165 c43b808c89e4c9db7fc005785362cde6 156 SUPERFAMILY SSF75217 2 154 7.85E-47 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases D172_012165 c43b808c89e4c9db7fc005785362cde6 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 1.1E-73 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 D172_014920 6266bf3053ad31ee931942a24a9733cb 410 Gene3D G3DSA:3.30.420.40 197 352 1.6E-117 T 14-10-2018 D172_014920 6266bf3053ad31ee931942a24a9733cb 410 SUPERFAMILY SSF53067 198 377 2.1E-46 T 14-10-2018 D172_014920 6266bf3053ad31ee931942a24a9733cb 410 Gene3D G3DSA:3.30.420.40 13 372 1.6E-117 T 14-10-2018 D172_014920 6266bf3053ad31ee931942a24a9733cb 410 Gene3D G3DSA:3.30.1490.110 87 169 1.6E-117 T 14-10-2018 D172_014920 6266bf3053ad31ee931942a24a9733cb 410 Pfam PF14450 Cell division protein FtsA 207 374 3.7E-24 T 14-10-2018 D172_014920 6266bf3053ad31ee931942a24a9733cb 410 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 410 29.602 T 14-10-2018 IPR020823 Cell division protein FtsA D172_014920 6266bf3053ad31ee931942a24a9733cb 410 PIRSF PIRSF003101 1 410 4.1E-151 T 14-10-2018 IPR020823 Cell division protein FtsA D172_014920 6266bf3053ad31ee931942a24a9733cb 410 SMART SM00842 10 196 2.0E-100 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 D172_014920 6266bf3053ad31ee931942a24a9733cb 410 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 9.4E-31 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 D172_014920 6266bf3053ad31ee931942a24a9733cb 410 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 1.3E-150 T 14-10-2018 IPR020823 Cell division protein FtsA D172_014920 6266bf3053ad31ee931942a24a9733cb 410 SUPERFAMILY SSF53067 9 197 1.88E-55 T 14-10-2018 D172_014920 6266bf3053ad31ee931942a24a9733cb 410 Pfam PF14450 Cell division protein FtsA 11 180 3.0E-9 T 14-10-2018 D172_014920 6266bf3053ad31ee931942a24a9733cb 410 Gene3D G3DSA:3.90.640.10 235 300 1.6E-117 T 14-10-2018 D172_006115 4b137a21e27d4672198c18240b4fc016 257 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 257 1.0E-98 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 D172_006115 4b137a21e27d4672198c18240b4fc016 257 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 257 41.339 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 D172_006115 4b137a21e27d4672198c18240b4fc016 257 SUPERFAMILY SSF56281 4 257 1.4E-63 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_006115 4b137a21e27d4672198c18240b4fc016 257 SMART SM00849 12 167 1.2E-28 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_006115 4b137a21e27d4672198c18240b4fc016 257 PIRSF PIRSF005457 1 257 4.1E-88 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 D172_006115 4b137a21e27d4672198c18240b4fc016 257 Gene3D G3DSA:3.60.15.10 1 257 2.2E-89 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_006115 4b137a21e27d4672198c18240b4fc016 257 Pfam PF00753 Metallo-beta-lactamase superfamily 38 164 1.7E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_006115 4b137a21e27d4672198c18240b4fc016 257 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 168 257 1.3E-22 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 D172_014335 59af4fea8853c8d04b66c180f5e2f659 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.139 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_014335 59af4fea8853c8d04b66c180f5e2f659 154 Gene3D G3DSA:3.40.50.960 1 154 2.2E-60 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_014335 59af4fea8853c8d04b66c180f5e2f659 154 SUPERFAMILY SSF52121 3 154 1.57E-58 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_014335 59af4fea8853c8d04b66c180f5e2f659 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.7E-55 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_014335 59af4fea8853c8d04b66c180f5e2f659 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 1.6E-52 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_010470 5d6e7c6a080203f1078b3fceaee16196 270 Gene3D G3DSA:3.40.50.1820 15 269 1.6E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_010470 5d6e7c6a080203f1078b3fceaee16196 270 Pfam PF00561 alpha/beta hydrolase fold 45 171 3.6E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_010470 5d6e7c6a080203f1078b3fceaee16196 270 SUPERFAMILY SSF53474 25 268 2.68E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_003970 9b9e64ccf44e3d5f19849f44aeb3ad6c 268 Pfam PF01636 Phosphotransferase enzyme family 26 208 9.7E-17 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase D172_003970 9b9e64ccf44e3d5f19849f44aeb3ad6c 268 SUPERFAMILY SSF56112 8 247 3.01E-30 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily D172_003970 9b9e64ccf44e3d5f19849f44aeb3ad6c 268 Gene3D G3DSA:3.90.1200.10 89 259 5.1E-24 T 14-10-2018 D172_010000 f1eaa2d8028e68921fdcf784f761a566 141 Gene3D G3DSA:2.60.40.3230 19 134 1.4E-31 T 14-10-2018 IPR038483 YcfL-like superfamily D172_010000 f1eaa2d8028e68921fdcf784f761a566 141 Pfam PF07233 Protein of unknown function (DUF1425) 40 130 3.9E-26 T 14-10-2018 IPR010824 Protein of unknown function DUF1425 D172_019515 4757410f535a64dd7f861cc5aeedc523 511 Pfam PF08323 Starch synthase catalytic domain 2 255 4.1E-58 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 D172_019515 4757410f535a64dd7f861cc5aeedc523 511 SUPERFAMILY SSF53756 11 505 3.14E-82 T 14-10-2018 D172_019515 4757410f535a64dd7f861cc5aeedc523 511 Pfam PF00534 Glycosyl transferases group 1 317 456 2.4E-12 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 D172_019515 4757410f535a64dd7f861cc5aeedc523 511 Gene3D G3DSA:3.40.50.2000 3 507 9.5E-103 T 14-10-2018 D172_019515 4757410f535a64dd7f861cc5aeedc523 511 Gene3D G3DSA:3.40.50.2000 271 494 9.5E-103 T 14-10-2018 D172_016015 e02bdd80a375b179ea25d20fe2e1d05a 457 Gene3D G3DSA:1.10.10.920 364 457 2.8E-30 T 14-10-2018 D172_016015 e02bdd80a375b179ea25d20fe2e1d05a 457 SMART SM00729 51 268 4.2E-48 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D172_016015 e02bdd80a375b179ea25d20fe2e1d05a 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 457 1.1E-176 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 D172_016015 e02bdd80a375b179ea25d20fe2e1d05a 457 Gene3D G3DSA:3.80.30.20 3 363 2.6E-127 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe D172_016015 e02bdd80a375b179ea25d20fe2e1d05a 457 PIRSF PIRSF000167 5 454 9.4E-161 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 D172_016015 e02bdd80a375b179ea25d20fe2e1d05a 457 SUPERFAMILY SSF102114 7 444 8.37E-129 T 14-10-2018 D172_016015 e02bdd80a375b179ea25d20fe2e1d05a 457 Pfam PF04055 Radical SAM superfamily 56 227 5.0E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D172_016015 e02bdd80a375b179ea25d20fe2e1d05a 457 Pfam PF06969 HemN C-terminal domain 363 429 2.1E-7 T 14-10-2018 IPR010723 HemN, C-terminal D172_017060 b7f600d0633e78f52250bfdf124596fe 250 Gene3D G3DSA:2.40.50.40 138 209 1.4E-10 T 14-10-2018 D172_017060 b7f600d0633e78f52250bfdf124596fe 250 Pfam PF04397 LytTr DNA-binding domain 149 245 8.8E-21 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 D172_017060 b7f600d0633e78f52250bfdf124596fe 250 SMART SM00850 148 247 1.2E-25 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 D172_003935 87cf931a9f77996ea6cf803fbfd875c8 160 SUPERFAMILY SSF48452 108 144 3.8E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_015985 e23b350518bea042fb44370060abd072 132 Pfam PF00293 NUDIX domain 7 125 5.4E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D172_015985 e23b350518bea042fb44370060abd072 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 1.3E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D172_015985 e23b350518bea042fb44370060abd072 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 1.3E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D172_015985 e23b350518bea042fb44370060abd072 132 Gene3D G3DSA:3.90.79.10 1 132 1.4E-35 T 14-10-2018 D172_015985 e23b350518bea042fb44370060abd072 132 SUPERFAMILY SSF55811 3 127 1.49E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D172_015985 e23b350518bea042fb44370060abd072 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D172_015985 e23b350518bea042fb44370060abd072 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 5 127 8.5E-37 T 14-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 D172_007710 6ecf3da46c17024a5c1877ad9f6d0173 473 ProSitePatterns PS00523 Sulfatases signature 1. 75 87 - T 14-10-2018 IPR024607 Sulfatase, conserved site D172_007710 6ecf3da46c17024a5c1877ad9f6d0173 473 Gene3D G3DSA:3.40.720.10 28 383 6.6E-134 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D172_007710 6ecf3da46c17024a5c1877ad9f6d0173 473 Pfam PF00884 Sulfatase 29 352 2.7E-75 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 D172_007710 6ecf3da46c17024a5c1877ad9f6d0173 473 SUPERFAMILY SSF53649 27 441 2.76E-125 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D172_007710 6ecf3da46c17024a5c1877ad9f6d0173 473 Gene3D G3DSA:3.30.1120.10 384 440 6.6E-134 T 14-10-2018 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 8.5E-55 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 Gene3D G3DSA:3.40.50.1010 9 277 2.4E-96 T 14-10-2018 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 265 5.5E-31 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 SUPERFAMILY SSF88723 7 170 3.92E-55 T 14-10-2018 IPR029060 PIN-like domain superfamily D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 SMART SM00474 312 499 1.0E-38 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 SMART SM00475 7 261 8.9E-129 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 SMART SM00279 173 208 1.5E-14 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 Gene3D G3DSA:3.30.420.10 309 524 6.0E-70 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 SUPERFAMILY SSF56672 504 911 2.11E-156 T 14-10-2018 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 SUPERFAMILY SSF47807 171 283 6.13E-35 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 Gene3D G3DSA:1.20.1060.10 525 640 2.4E-41 T 14-10-2018 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 SMART SM00482 668 875 1.4E-113 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 TIGRFAM TIGR00593 pola: DNA polymerase I 9 911 8.2E-290 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 SUPERFAMILY SSF53098 315 499 3.66E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 Gene3D G3DSA:1.10.150.20 174 246 2.4E-96 T 14-10-2018 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 Gene3D G3DSA:3.30.70.370 646 907 1.1E-110 T 14-10-2018 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 PRINTS PR00868 DNA-polymerase family A (pol I) signature 712 725 2.0E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 PRINTS PR00868 DNA-polymerase family A (pol I) signature 736 761 2.0E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 PRINTS PR00868 DNA-polymerase family A (pol I) signature 827 843 2.0E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 PRINTS PR00868 DNA-polymerase family A (pol I) signature 660 675 2.0E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 PRINTS PR00868 DNA-polymerase family A (pol I) signature 637 659 2.0E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 PRINTS PR00868 DNA-polymerase family A (pol I) signature 773 784 2.0E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 PRINTS PR00868 DNA-polymerase family A (pol I) signature 795 806 2.0E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 PRINTS PR00868 DNA-polymerase family A (pol I) signature 858 871 2.0E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 PRINTS PR00868 DNA-polymerase family A (pol I) signature 682 705 2.0E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 Pfam PF01612 3'-5' exonuclease 312 498 2.6E-38 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 Gene3D G3DSA:1.10.150.20 691 834 1.1E-110 T 14-10-2018 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 Pfam PF00476 DNA polymerase family A 533 908 6.3E-153 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_016050 ebe37d271579f2f2352ae215c78f83d6 911 ProSitePatterns PS00447 DNA polymerase family A signature. 736 755 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_020405 6f22e3f7ca746bf1cc48691db578129f 302 Gene3D G3DSA:3.40.190.10 94 295 3.2E-47 T 14-10-2018 D172_020405 6f22e3f7ca746bf1cc48691db578129f 302 SUPERFAMILY SSF46785 9 90 1.77E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_020405 6f22e3f7ca746bf1cc48691db578129f 302 Gene3D G3DSA:3.40.190.10 175 271 3.2E-47 T 14-10-2018 D172_020405 6f22e3f7ca746bf1cc48691db578129f 302 SUPERFAMILY SSF53850 94 297 3.57E-29 T 14-10-2018 D172_020405 6f22e3f7ca746bf1cc48691db578129f 302 Gene3D G3DSA:1.10.10.10 3 91 9.7E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_020405 6f22e3f7ca746bf1cc48691db578129f 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 71 4.0E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020405 6f22e3f7ca746bf1cc48691db578129f 302 Pfam PF03466 LysR substrate binding domain 100 296 8.2E-13 T 14-10-2018 IPR005119 LysR, substrate-binding D172_005545 891ed6913335988520693baa309e0f95 858 SUPERFAMILY SSF81923 4 156 8.83E-39 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D172_005545 891ed6913335988520693baa309e0f95 858 Gene3D G3DSA:3.40.50.300 343 544 7.7E-66 T 14-10-2018 D172_005545 891ed6913335988520693baa309e0f95 858 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 4.4E-57 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D172_005545 891ed6913335988520693baa309e0f95 858 Gene3D G3DSA:1.10.1780.10 1 148 4.6E-29 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D172_005545 891ed6913335988520693baa309e0f95 858 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 D172_005545 891ed6913335988520693baa309e0f95 858 Gene3D G3DSA:1.10.8.60 766 858 7.2E-27 T 14-10-2018 D172_005545 891ed6913335988520693baa309e0f95 858 SUPERFAMILY SSF52540 546 857 5.85E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_005545 891ed6913335988520693baa309e0f95 858 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 1.9E-25 T 14-10-2018 IPR019489 Clp ATPase, C-terminal D172_005545 891ed6913335988520693baa309e0f95 858 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 D172_005545 891ed6913335988520693baa309e0f95 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 7.1E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 D172_005545 891ed6913335988520693baa309e0f95 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 7.1E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 D172_005545 891ed6913335988520693baa309e0f95 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 7.1E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 D172_005545 891ed6913335988520693baa309e0f95 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 7.1E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 D172_005545 891ed6913335988520693baa309e0f95 858 SUPERFAMILY SSF52540 159 545 1.33E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_005545 891ed6913335988520693baa309e0f95 858 Gene3D G3DSA:3.40.50.300 149 342 9.0E-76 T 14-10-2018 D172_005545 891ed6913335988520693baa309e0f95 858 SMART SM00382 198 343 1.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_005545 891ed6913335988520693baa309e0f95 858 SMART SM00382 597 735 3.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_005545 891ed6913335988520693baa309e0f95 858 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 D172_005545 891ed6913335988520693baa309e0f95 858 SMART SM01086 766 855 9.2E-37 T 14-10-2018 IPR019489 Clp ATPase, C-terminal D172_005545 891ed6913335988520693baa309e0f95 858 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 334 1.2E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D172_005545 891ed6913335988520693baa309e0f95 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 6.5E-8 T 14-10-2018 IPR004176 Clp, N-terminal D172_005545 891ed6913335988520693baa309e0f95 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 8.0E-10 T 14-10-2018 IPR004176 Clp, N-terminal D172_005545 891ed6913335988520693baa309e0f95 858 Gene3D G3DSA:3.40.50.300 550 764 1.9E-88 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF52777 2918 3159 4.89E-45 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SMART SM00823 Phosphopantetheine attachment site 4774 4843 2.5E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SMART SM00823 Phosphopantetheine attachment site 1608 1677 0.0016 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SMART SM00823 Phosphopantetheine attachment site 2656 2725 0.27 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SMART SM00823 Phosphopantetheine attachment site 560 629 2.5E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SMART SM00823 Phosphopantetheine attachment site 3713 3782 2.5E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SMART SM00823 Phosphopantetheine attachment site 5833 5902 0.094 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF56801 18 572 5.76E-138 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.30.559.30 3970 4214 2.8E-115 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:1.10.1200.10 5824 5904 1.7E-22 T 14-10-2018 IPR036736 ACP-like superfamily D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:1.10.1200.10 2645 2727 4.1E-17 T 14-10-2018 IPR036736 ACP-like superfamily D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:1.10.1200.10 1599 1676 1.1E-22 T 14-10-2018 IPR036736 ACP-like superfamily D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:1.10.1200.10 3704 3781 1.4E-23 T 14-10-2018 IPR036736 ACP-like superfamily D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:1.10.1200.10 4765 4842 1.4E-23 T 14-10-2018 IPR036736 ACP-like superfamily D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:1.10.1200.10 551 628 1.4E-23 T 14-10-2018 IPR036736 ACP-like superfamily D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 ProSitePatterns PS00455 Putative AMP-binding domain signature. 5467 5478 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.30.559.10 3795 4159 2.8E-115 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF52777 3977 4218 6.0E-47 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.30.559.30 2913 3158 5.3E-113 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF52777 1691 1861 3.34E-36 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.40.50.12780 29 447 8.5E-122 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.40.50.12780 2134 2548 6.8E-106 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.40.50.12780 5302 5720 1.3E-121 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.40.50.12780 4241 4661 5.8E-128 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.40.50.12780 1088 1495 3.8E-119 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.40.50.12780 3182 3600 1.3E-121 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF52777 643 813 6.78E-35 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF52777 1869 2110 1.67E-46 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF52777 2739 2909 8.78E-39 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.30.300.30 2549 2644 5.6E-26 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF47336 552 625 3.66E-18 T 14-10-2018 IPR036736 ACP-like superfamily D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.30.300.30 5721 5823 6.8E-31 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.30.300.30 1496 1598 4.2E-26 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.30.300.30 4662 4764 6.8E-31 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.30.300.30 448 550 6.8E-31 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.30.300.30 3601 3703 6.8E-31 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.30.559.30 5031 5275 1.6E-115 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.30.559.10 1690 2056 7.3E-114 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF47336 5825 5898 1.57E-15 T 14-10-2018 IPR036736 ACP-like superfamily D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF52777 4857 5027 1.45E-35 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4406 4417 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF47336 1600 1673 4.19E-17 T 14-10-2018 IPR036736 ACP-like superfamily D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.30.559.10 4856 5220 1.6E-115 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF52777 824 1065 1.33E-47 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.30.559.30 1865 2112 7.3E-114 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF56801 1066 1621 4.71E-143 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF56801 4219 4786 9.42E-143 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF13193 AMP-binding enzyme C-terminal domain 5734 5808 1.2E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF13193 AMP-binding enzyme C-terminal domain 2562 2631 6.3E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF13193 AMP-binding enzyme C-terminal domain 1509 1583 3.3E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF13193 AMP-binding enzyme C-terminal domain 3614 3688 1.2E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF13193 AMP-binding enzyme C-terminal domain 461 535 1.2E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF13193 AMP-binding enzyme C-terminal domain 4675 4749 1.2E-11 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.30.559.10 2738 3105 5.3E-113 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 ProSitePatterns PS00012 Phosphopantetheine attachment site. 5857 5872 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF47336 4766 4839 3.66E-18 T 14-10-2018 IPR036736 ACP-like superfamily D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2301 2312 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.30.559.10 642 1009 2.2E-114 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF47336 2649 2722 1.57E-12 T 14-10-2018 IPR036736 ACP-like superfamily D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF56801 5280 5845 8.63E-140 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00550 Phosphopantetheine attachment site 4777 4837 8.0E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00550 Phosphopantetheine attachment site 563 623 8.0E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00550 Phosphopantetheine attachment site 5836 5897 4.4E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00550 Phosphopantetheine attachment site 2658 2718 4.2E-6 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00550 Phosphopantetheine attachment site 1610 1671 1.3E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00550 Phosphopantetheine attachment site 3716 3776 8.0E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF56801 3160 3725 6.93E-140 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Gene3D G3DSA:3.30.559.30 817 1064 2.2E-114 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF56801 2105 2669 8.11E-126 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF52777 3796 3966 2.33E-35 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF52777 5038 5279 6.0E-47 T 14-10-2018 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00501 AMP-binding enzyme 4255 4667 4.8E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00501 AMP-binding enzyme 3196 3606 2.2E-85 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00501 AMP-binding enzyme 43 453 1.8E-85 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00501 AMP-binding enzyme 2147 2554 1.6E-78 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00501 AMP-binding enzyme 1102 1501 6.6E-85 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00501 AMP-binding enzyme 5316 5726 2.2E-85 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 SUPERFAMILY SSF47336 3705 3778 3.66E-18 T 14-10-2018 IPR036736 ACP-like superfamily D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00668 Condensation domain 4853 5296 5.4E-91 T 14-10-2018 IPR001242 Condensation domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00668 Condensation domain 1688 2121 3.0E-90 T 14-10-2018 IPR001242 Condensation domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00668 Condensation domain 3792 4235 6.1E-91 T 14-10-2018 IPR001242 Condensation domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00668 Condensation domain 2737 3176 1.6E-88 T 14-10-2018 IPR001242 Condensation domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 Pfam PF00668 Condensation domain 639 1081 2.7E-90 T 14-10-2018 IPR001242 Condensation domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4276 4691 2.7E-127 T 14-10-2018 IPR010071 Amino acid adenylation domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 64 477 1.4E-123 T 14-10-2018 IPR010071 Amino acid adenylation domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 5337 5750 1.6E-123 T 14-10-2018 IPR010071 Amino acid adenylation domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1123 1525 6.6E-121 T 14-10-2018 IPR010071 Amino acid adenylation domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3217 3630 1.6E-123 T 14-10-2018 IPR010071 Amino acid adenylation domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2169 2578 1.4E-104 T 14-10-2018 IPR010071 Amino acid adenylation domain D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1254 1265 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_003275 72454fd9d4bfda32736394778ae1cccd 5913 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3347 3358 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_018670 8c63bbe0fca2e248a30a9b8d0bb1866e 711 SUPERFAMILY SSF56935 33 711 9.16E-93 T 14-10-2018 D172_018670 8c63bbe0fca2e248a30a9b8d0bb1866e 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 150 1.2E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_018670 8c63bbe0fca2e248a30a9b8d0bb1866e 711 Gene3D G3DSA:2.40.170.20 174 711 4.1E-63 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_018670 8c63bbe0fca2e248a30a9b8d0bb1866e 711 Gene3D G3DSA:2.170.130.10 28 155 4.9E-23 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_018670 8c63bbe0fca2e248a30a9b8d0bb1866e 711 Pfam PF00593 TonB dependent receptor 222 710 3.8E-28 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_011455 8c24dd56958a1c9021ecea892504466e 312 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 24 306 8.5E-87 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 D172_011455 8c24dd56958a1c9021ecea892504466e 312 SUPERFAMILY SSF53335 34 274 2.22E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_011455 8c24dd56958a1c9021ecea892504466e 312 Gene3D G3DSA:3.40.50.150 76 309 2.3E-48 T 14-10-2018 D172_008030 0799d2d8605cd59bf42713cd36d4f334 937 Pfam PF00005 ABC transporter 36 183 6.8E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_008030 0799d2d8605cd59bf42713cd36d4f334 937 SUPERFAMILY SSF52540 21 247 4.02E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_008030 0799d2d8605cd59bf42713cd36d4f334 937 SMART SM00382 311 496 4.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_008030 0799d2d8605cd59bf42713cd36d4f334 937 SMART SM00382 45 276 8.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_008030 0799d2d8605cd59bf42713cd36d4f334 937 SUPERFAMILY SSF52540 286 506 1.66E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_008030 0799d2d8605cd59bf42713cd36d4f334 937 Pfam PF00005 ABC transporter 302 446 4.4E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_008030 0799d2d8605cd59bf42713cd36d4f334 937 Gene3D G3DSA:3.40.50.300 2 266 5.7E-62 T 14-10-2018 D172_008030 0799d2d8605cd59bf42713cd36d4f334 937 Pfam PF12698 ABC-2 family transporter protein 590 929 5.0E-40 T 14-10-2018 D172_008030 0799d2d8605cd59bf42713cd36d4f334 937 Gene3D G3DSA:3.40.50.300 275 525 2.4E-61 T 14-10-2018 D172_008030 0799d2d8605cd59bf42713cd36d4f334 937 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_005880 156e7ae87a4a48a22b7f578e279d3a4e 382 Gene3D G3DSA:3.40.50.10330 85 174 1.4E-6 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 D172_005880 156e7ae87a4a48a22b7f578e279d3a4e 382 Gene3D G3DSA:2.60.200.40 175 280 1.4E-6 T 14-10-2018 D172_005880 156e7ae87a4a48a22b7f578e279d3a4e 382 Pfam PF01513 ATP-NAD kinase 4 360 2.9E-45 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 D172_005880 156e7ae87a4a48a22b7f578e279d3a4e 382 PIRSF PIRSF016907 1 371 4.0E-134 T 14-10-2018 IPR011386 Putative ATP-NAD kinase D172_005880 156e7ae87a4a48a22b7f578e279d3a4e 382 SUPERFAMILY SSF111331 5 139 8.07E-8 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily D172_004660 0ee065524ef98b0db057dbe0e66b6800 347 SUPERFAMILY SSF52540 3 267 1.97E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_004660 0ee065524ef98b0db057dbe0e66b6800 347 Hamap MF_00268 Protein RecA [recA]. 5 329 51.798 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D172_004660 0ee065524ef98b0db057dbe0e66b6800 347 Pfam PF00154 recA bacterial DNA recombination protein 7 268 4.5E-146 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D172_004660 0ee065524ef98b0db057dbe0e66b6800 347 SMART SM00382 57 228 5.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_004660 0ee065524ef98b0db057dbe0e66b6800 347 Gene3D G3DSA:3.40.50.300 26 267 2.1E-82 T 14-10-2018 D172_004660 0ee065524ef98b0db057dbe0e66b6800 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 2.2E-174 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D172_004660 0ee065524ef98b0db057dbe0e66b6800 347 ProSitePatterns PS00321 recA signature. 213 221 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 D172_004660 0ee065524ef98b0db057dbe0e66b6800 347 Gene3D G3DSA:3.30.250.10 268 344 5.6E-26 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal D172_004660 0ee065524ef98b0db057dbe0e66b6800 347 SUPERFAMILY SSF54752 268 325 4.71E-21 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal D172_004660 0ee065524ef98b0db057dbe0e66b6800 347 PRINTS PR00142 RecA protein signature 243 272 1.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D172_004660 0ee065524ef98b0db057dbe0e66b6800 347 PRINTS PR00142 RecA protein signature 127 156 1.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D172_004660 0ee065524ef98b0db057dbe0e66b6800 347 PRINTS PR00142 RecA protein signature 165 194 1.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D172_004660 0ee065524ef98b0db057dbe0e66b6800 347 PRINTS PR00142 RecA protein signature 297 314 1.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D172_004660 0ee065524ef98b0db057dbe0e66b6800 347 PRINTS PR00142 RecA protein signature 210 238 1.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D172_004660 0ee065524ef98b0db057dbe0e66b6800 347 PRINTS PR00142 RecA protein signature 93 122 1.9E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 D172_019995 d086d1044be50645399dd687338e6e9b 269 Gene3D G3DSA:1.10.287.70 120 231 5.9E-30 T 14-10-2018 D172_019995 d086d1044be50645399dd687338e6e9b 269 SUPERFAMILY SSF81324 15 231 1.88E-29 T 14-10-2018 D172_019995 d086d1044be50645399dd687338e6e9b 269 Gene3D G3DSA:1.20.120.350 5 119 1.4E-27 T 14-10-2018 IPR027359 Voltage-dependent channel domain superfamily D172_019995 d086d1044be50645399dd687338e6e9b 269 PRINTS PR01433 Polycystic kidney disease type 2 protein (PKD2) signature 14 36 2.0E-7 T 14-10-2018 IPR003915 Polycystic kidney disease type 2 protein GO:0005509|GO:0016020 D172_019995 d086d1044be50645399dd687338e6e9b 269 PRINTS PR01433 Polycystic kidney disease type 2 protein (PKD2) signature 138 159 2.0E-7 T 14-10-2018 IPR003915 Polycystic kidney disease type 2 protein GO:0005509|GO:0016020 D172_019995 d086d1044be50645399dd687338e6e9b 269 PRINTS PR01433 Polycystic kidney disease type 2 protein (PKD2) signature 202 223 2.0E-7 T 14-10-2018 IPR003915 Polycystic kidney disease type 2 protein GO:0005509|GO:0016020 D172_019995 d086d1044be50645399dd687338e6e9b 269 Pfam PF00520 Ion transport protein 16 232 3.0E-40 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 D172_004045 fd32e9cde1b6510cfede942f29adf8bd 430 Pfam PF07687 Peptidase dimerisation domain 220 317 3.0E-13 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain D172_004045 fd32e9cde1b6510cfede942f29adf8bd 430 Gene3D G3DSA:3.40.630.10 35 409 5.3E-137 T 14-10-2018 D172_004045 fd32e9cde1b6510cfede942f29adf8bd 430 PIRSF PIRSF005962 19 429 9.3E-121 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 D172_004045 fd32e9cde1b6510cfede942f29adf8bd 430 SUPERFAMILY SSF55031 219 326 9.68E-29 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain D172_004045 fd32e9cde1b6510cfede942f29adf8bd 430 Gene3D G3DSA:3.30.70.360 216 331 5.3E-137 T 14-10-2018 D172_004045 fd32e9cde1b6510cfede942f29adf8bd 430 Pfam PF01546 Peptidase family M20/M25/M40 93 421 4.3E-35 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 D172_004045 fd32e9cde1b6510cfede942f29adf8bd 430 SUPERFAMILY SSF53187 24 426 8.86E-83 T 14-10-2018 D172_004045 fd32e9cde1b6510cfede942f29adf8bd 430 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 36 413 1.1E-102 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 D172_011280 1b951219130478ec13e0e0a14f0220fd 343 Pfam PF01112 Asparaginase 28 339 2.0E-118 T 14-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 D172_011280 1b951219130478ec13e0e0a14f0220fd 343 Gene3D G3DSA:3.60.20.30 208 343 4.1E-48 T 14-10-2018 D172_011280 1b951219130478ec13e0e0a14f0220fd 343 SUPERFAMILY SSF56235 27 338 2.87E-97 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_010275 a7871705b5a85b80a9f8effac06c4dd9 718 Gene3D G3DSA:3.40.50.1820 50 683 4.4E-257 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_010275 a7871705b5a85b80a9f8effac06c4dd9 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 510 534 8.5E-62 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_010275 a7871705b5a85b80a9f8effac06c4dd9 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 538 557 8.5E-62 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_010275 a7871705b5a85b80a9f8effac06c4dd9 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 624 639 8.5E-62 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_010275 a7871705b5a85b80a9f8effac06c4dd9 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 643 665 8.5E-62 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_010275 a7871705b5a85b80a9f8effac06c4dd9 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 568 588 8.5E-62 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_010275 a7871705b5a85b80a9f8effac06c4dd9 718 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 484 502 8.5E-62 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_010275 a7871705b5a85b80a9f8effac06c4dd9 718 SUPERFAMILY SSF50993 37 448 4.45E-98 T 14-10-2018 D172_010275 a7871705b5a85b80a9f8effac06c4dd9 718 SUPERFAMILY SSF53474 452 697 2.99E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_010275 a7871705b5a85b80a9f8effac06c4dd9 718 Pfam PF00326 Prolyl oligopeptidase family 499 714 6.1E-70 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 D172_010275 a7871705b5a85b80a9f8effac06c4dd9 718 Gene3D G3DSA:2.130.10.120 108 444 4.4E-257 T 14-10-2018 D172_010275 a7871705b5a85b80a9f8effac06c4dd9 718 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 42 442 2.6E-129 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 D172_010275 a7871705b5a85b80a9f8effac06c4dd9 718 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 545 575 - T 14-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 D172_011665 fd22425b2e7865f9c46135e10ed3591d 752 SUPERFAMILY SSF51126 32 462 1.42E-97 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor D172_011665 fd22425b2e7865f9c46135e10ed3591d 752 Pfam PF14592 Chondroitinase B 30 428 3.5E-119 T 14-10-2018 IPR039513 PL-6 family D172_011665 fd22425b2e7865f9c46135e10ed3591d 752 Gene3D G3DSA:2.160.20.10 27 470 5.4E-126 T 14-10-2018 IPR012334 Pectin lyase fold D172_011665 fd22425b2e7865f9c46135e10ed3591d 752 SUPERFAMILY SSF51126 469 750 2.51E-29 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor D172_011665 fd22425b2e7865f9c46135e10ed3591d 752 Gene3D G3DSA:2.160.20.10 471 752 2.2E-12 T 14-10-2018 IPR012334 Pectin lyase fold D172_011665 fd22425b2e7865f9c46135e10ed3591d 752 SMART SM00710 329 349 400.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_011665 fd22425b2e7865f9c46135e10ed3591d 752 SMART SM00710 295 316 5700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_011665 fd22425b2e7865f9c46135e10ed3591d 752 SMART SM00710 626 647 2300.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_011665 fd22425b2e7865f9c46135e10ed3591d 752 SMART SM00710 657 686 1900.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_011665 fd22425b2e7865f9c46135e10ed3591d 752 SMART SM00710 359 391 3900.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_011665 fd22425b2e7865f9c46135e10ed3591d 752 SMART SM00710 243 264 3800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_011665 fd22425b2e7865f9c46135e10ed3591d 752 SMART SM00710 153 175 9700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_011665 fd22425b2e7865f9c46135e10ed3591d 752 SMART SM00710 265 290 560.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_012685 75d3ea8e40c64315497b329abb9446b7 872 Pfam PF01966 HD domain 458 582 4.2E-11 T 14-10-2018 IPR006674 HD domain D172_012685 75d3ea8e40c64315497b329abb9446b7 872 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 35 865 8.2E-275 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 D172_012685 75d3ea8e40c64315497b329abb9446b7 872 PIRSF PIRSF006288 7 872 2.9E-287 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 D172_012685 75d3ea8e40c64315497b329abb9446b7 872 SUPERFAMILY SSF81593 195 311 1.41E-10 T 14-10-2018 D172_012685 75d3ea8e40c64315497b329abb9446b7 872 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 872 282.42 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 D172_012685 75d3ea8e40c64315497b329abb9446b7 872 Gene3D G3DSA:1.10.3210.10 437 579 5.3E-7 T 14-10-2018 D172_012685 75d3ea8e40c64315497b329abb9446b7 872 SUPERFAMILY SSF109604 413 582 1.1E-12 T 14-10-2018 D172_012685 75d3ea8e40c64315497b329abb9446b7 872 Pfam PF01909 Nucleotidyltransferase domain 67 128 4.7E-6 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 D172_012685 75d3ea8e40c64315497b329abb9446b7 872 SMART SM00471 446 593 4.1E-4 T 14-10-2018 IPR003607 HD/PDEase domain D172_012685 75d3ea8e40c64315497b329abb9446b7 872 SUPERFAMILY SSF55021 796 863 2.66E-5 T 14-10-2018 D172_012685 75d3ea8e40c64315497b329abb9446b7 872 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 6.1E-38 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 D172_012685 75d3ea8e40c64315497b329abb9446b7 872 SUPERFAMILY SSF81301 39 171 1.04E-18 T 14-10-2018 D172_001265 a5d16078e14cc2af324d99ddf251ec37 676 Pfam PF00929 Exonuclease 7 171 6.8E-21 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D172_001265 a5d16078e14cc2af324d99ddf251ec37 676 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 7 192 4.7E-32 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_001265 a5d16078e14cc2af324d99ddf251ec37 676 Gene3D G3DSA:3.30.420.10 1 180 2.6E-36 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_001265 a5d16078e14cc2af324d99ddf251ec37 676 SUPERFAMILY SSF53098 3 176 4.4E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_001265 a5d16078e14cc2af324d99ddf251ec37 676 SMART SM00479 5 180 1.7E-23 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D172_005950 60b48ca0a3ab7f4797c81de59d46e303 130 Pfam PF01548 Transposase 1 83 2.5E-15 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D172_013740 bbe37909c8e50368e01bd16b384a88c0 311 Gene3D G3DSA:2.170.230.10 155 243 3.7E-75 T 14-10-2018 D172_013740 bbe37909c8e50368e01bd16b384a88c0 311 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 65 284 1.2E-46 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D172_013740 bbe37909c8e50368e01bd16b384a88c0 311 ProSitePatterns PS00761 Signal peptidases I signature 3. 249 262 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 D172_013740 bbe37909c8e50368e01bd16b384a88c0 311 SUPERFAMILY SSF51306 78 309 2.14E-70 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily D172_013740 bbe37909c8e50368e01bd16b384a88c0 311 Gene3D G3DSA:2.10.109.10 78 284 3.7E-75 T 14-10-2018 D172_013740 bbe37909c8e50368e01bd16b384a88c0 311 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 D172_013740 bbe37909c8e50368e01bd16b384a88c0 311 Pfam PF00717 Peptidase S24-like 86 167 3.6E-21 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D172_013740 bbe37909c8e50368e01bd16b384a88c0 311 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 244 263 2.2E-23 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D172_013740 bbe37909c8e50368e01bd16b384a88c0 311 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 2.2E-23 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D172_013740 bbe37909c8e50368e01bd16b384a88c0 311 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 2.2E-23 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 D172_013740 bbe37909c8e50368e01bd16b384a88c0 311 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 D172_013740 bbe37909c8e50368e01bd16b384a88c0 311 Pfam PF10502 Signal peptidase, peptidase S26 242 281 6.3E-5 T 14-10-2018 IPR019533 Peptidase S26 D172_020895 29ed77f03f16997e9fc07989146044a3 642 Gene3D G3DSA:1.10.10.10 495 641 3.8E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_020895 29ed77f03f16997e9fc07989146044a3 642 SMART SM00487 14 210 9.9E-24 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_020895 29ed77f03f16997e9fc07989146044a3 642 Pfam PF00271 Helicase conserved C-terminal domain 219 323 3.2E-17 T 14-10-2018 IPR001650 Helicase, C-terminal D172_020895 29ed77f03f16997e9fc07989146044a3 642 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 133 142 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site D172_020895 29ed77f03f16997e9fc07989146044a3 642 SUPERFAMILY SSF52540 59 339 2.02E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_020895 29ed77f03f16997e9fc07989146044a3 642 Gene3D G3DSA:3.40.50.300 202 397 4.2E-45 T 14-10-2018 D172_020895 29ed77f03f16997e9fc07989146044a3 642 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 9 346 6.9E-111 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 D172_020895 29ed77f03f16997e9fc07989146044a3 642 Pfam PF00270 DEAD/DEAH box helicase 21 181 2.1E-16 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D172_020895 29ed77f03f16997e9fc07989146044a3 642 Pfam PF16124 RecQ zinc-binding 511 557 5.4E-7 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain D172_020895 29ed77f03f16997e9fc07989146044a3 642 Gene3D G3DSA:3.40.50.300 1 200 1.8E-66 T 14-10-2018 D172_020895 29ed77f03f16997e9fc07989146044a3 642 SMART SM00490 243 324 1.6E-26 T 14-10-2018 IPR001650 Helicase, C-terminal D172_010345 fb6c04958a2e1a53772f8bef8017ea1e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 8.5E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_010345 fb6c04958a2e1a53772f8bef8017ea1e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.5E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_010345 fb6c04958a2e1a53772f8bef8017ea1e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.5E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_010345 fb6c04958a2e1a53772f8bef8017ea1e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 8.5E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_010345 fb6c04958a2e1a53772f8bef8017ea1e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 8.5E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_010345 fb6c04958a2e1a53772f8bef8017ea1e 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D172_010345 fb6c04958a2e1a53772f8bef8017ea1e 263 Pfam PF00106 short chain dehydrogenase 6 195 1.7E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_010345 fb6c04958a2e1a53772f8bef8017ea1e 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_010345 fb6c04958a2e1a53772f8bef8017ea1e 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_010345 fb6c04958a2e1a53772f8bef8017ea1e 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 4.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_010345 fb6c04958a2e1a53772f8bef8017ea1e 263 Gene3D G3DSA:3.40.50.720 1 262 2.3E-64 T 14-10-2018 D172_010345 fb6c04958a2e1a53772f8bef8017ea1e 263 SUPERFAMILY SSF51735 1 250 3.15E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_015410 415a89ac4ede06ed19f475464e1452b6 332 Pfam PF02397 Bacterial sugar transferase 145 327 8.7E-66 T 14-10-2018 IPR003362 Bacterial sugar transferase D172_015410 415a89ac4ede06ed19f475464e1452b6 332 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 107 330 4.6E-91 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase D172_017285 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF13936 Helix-turn-helix domain 3 46 3.6E-11 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain D172_017285 3288bfc80962abb2f0aeb6fb75ada6f4 322 Gene3D G3DSA:3.30.420.10 164 320 2.9E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_017285 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF53098 170 316 3.03E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_017285 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF00665 Integrase core domain 172 275 5.2E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_017285 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF46689 4 113 4.12E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_003810 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF13936 Helix-turn-helix domain 3 46 3.6E-11 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain D172_003810 3288bfc80962abb2f0aeb6fb75ada6f4 322 Gene3D G3DSA:3.30.420.10 164 320 2.9E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_003810 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF53098 170 316 3.03E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_003810 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF00665 Integrase core domain 172 275 5.2E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_003810 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF46689 4 113 4.12E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_014675 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF13936 Helix-turn-helix domain 3 46 3.6E-11 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain D172_014675 3288bfc80962abb2f0aeb6fb75ada6f4 322 Gene3D G3DSA:3.30.420.10 164 320 2.9E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_014675 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF53098 170 316 3.03E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_014675 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF00665 Integrase core domain 172 275 5.2E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_014675 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF46689 4 113 4.12E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_006735 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF13936 Helix-turn-helix domain 3 46 3.6E-11 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain D172_006735 3288bfc80962abb2f0aeb6fb75ada6f4 322 Gene3D G3DSA:3.30.420.10 164 320 2.9E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_006735 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF53098 170 316 3.03E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_006735 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF00665 Integrase core domain 172 275 5.2E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_006735 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF46689 4 113 4.12E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_011970 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF13936 Helix-turn-helix domain 3 46 3.6E-11 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain D172_011970 3288bfc80962abb2f0aeb6fb75ada6f4 322 Gene3D G3DSA:3.30.420.10 164 320 2.9E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_011970 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF53098 170 316 3.03E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_011970 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF00665 Integrase core domain 172 275 5.2E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_011970 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF46689 4 113 4.12E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_013600 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF13936 Helix-turn-helix domain 3 46 3.6E-11 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain D172_013600 3288bfc80962abb2f0aeb6fb75ada6f4 322 Gene3D G3DSA:3.30.420.10 164 320 2.9E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_013600 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF53098 170 316 3.03E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_013600 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF00665 Integrase core domain 172 275 5.2E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_013600 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF46689 4 113 4.12E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_012330 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF13936 Helix-turn-helix domain 3 46 3.6E-11 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain D172_012330 3288bfc80962abb2f0aeb6fb75ada6f4 322 Gene3D G3DSA:3.30.420.10 164 320 2.9E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_012330 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF53098 170 316 3.03E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_012330 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF00665 Integrase core domain 172 275 5.2E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_012330 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF46689 4 113 4.12E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_017710 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF13936 Helix-turn-helix domain 3 46 3.6E-11 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain D172_017710 3288bfc80962abb2f0aeb6fb75ada6f4 322 Gene3D G3DSA:3.30.420.10 164 320 2.9E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_017710 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF53098 170 316 3.03E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_017710 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF00665 Integrase core domain 172 275 5.2E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_017710 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF46689 4 113 4.12E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_013650 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF13936 Helix-turn-helix domain 3 46 3.6E-11 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain D172_013650 3288bfc80962abb2f0aeb6fb75ada6f4 322 Gene3D G3DSA:3.30.420.10 164 320 2.9E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_013650 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF53098 170 316 3.03E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_013650 3288bfc80962abb2f0aeb6fb75ada6f4 322 Pfam PF00665 Integrase core domain 172 275 5.2E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_013650 3288bfc80962abb2f0aeb6fb75ada6f4 322 SUPERFAMILY SSF46689 4 113 4.12E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 457 2.8E-17 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 SUPERFAMILY SSF51905 1 363 3.24E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 SUPERFAMILY SSF55424 347 466 4.98E-25 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 Gene3D G3DSA:3.30.390.30 345 468 1.3E-40 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 1.9E-18 T 14-10-2018 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 276 1.9E-18 T 14-10-2018 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 1.9E-18 T 14-10-2018 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.9E-18 T 14-10-2018 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 Gene3D G3DSA:1.10.287.990 37 106 8.4E-96 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 PIRSF PIRSF000350 1 468 3.0E-62 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 Gene3D G3DSA:3.50.50.60 7 328 8.4E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 Gene3D G3DSA:3.50.50.60 146 267 8.4E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.8E-40 T 14-10-2018 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 1.8E-40 T 14-10-2018 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 1.8E-40 T 14-10-2018 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 1.8E-40 T 14-10-2018 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.8E-40 T 14-10-2018 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 1.8E-40 T 14-10-2018 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 1.8E-40 T 14-10-2018 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 261 275 1.8E-40 T 14-10-2018 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 1.8E-40 T 14-10-2018 D172_013595 f01095a1d1ca2a664772c986d5c6960f 482 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 325 1.6E-41 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D172_008325 503f96c2e38124d67e32be3051e6ad67 428 Gene3D G3DSA:2.20.28.60 1 50 5.4E-26 T 14-10-2018 D172_008325 503f96c2e38124d67e32be3051e6ad67 428 Gene3D G3DSA:1.10.230.10 268 376 5.1E-146 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain D172_008325 503f96c2e38124d67e32be3051e6ad67 428 PIRSF PIRSF001369 38 428 3.1E-171 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type D172_008325 503f96c2e38124d67e32be3051e6ad67 428 Gene3D G3DSA:1.10.580.10 57 411 5.1E-146 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 D172_008325 503f96c2e38124d67e32be3051e6ad67 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 422 3.0E-228 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 D172_008325 503f96c2e38124d67e32be3051e6ad67 428 SUPERFAMILY SSF48256 4 428 3.14E-167 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 D172_008325 503f96c2e38124d67e32be3051e6ad67 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 D172_008325 503f96c2e38124d67e32be3051e6ad67 428 PRINTS PR00143 Citrate synthase signature 165 178 4.0E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 D172_008325 503f96c2e38124d67e32be3051e6ad67 428 PRINTS PR00143 Citrate synthase signature 296 316 4.0E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 D172_008325 503f96c2e38124d67e32be3051e6ad67 428 PRINTS PR00143 Citrate synthase signature 219 234 4.0E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 D172_008325 503f96c2e38124d67e32be3051e6ad67 428 PRINTS PR00143 Citrate synthase signature 379 393 4.0E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 D172_008325 503f96c2e38124d67e32be3051e6ad67 428 PRINTS PR00143 Citrate synthase signature 359 375 4.0E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 D172_008325 503f96c2e38124d67e32be3051e6ad67 428 PRINTS PR00143 Citrate synthase signature 241 269 4.0E-55 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 D172_008325 503f96c2e38124d67e32be3051e6ad67 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 411 1.3E-133 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 D172_021025 3bd4bc3d9d3ca7691e9aa09373f8c486 372 PIRSF PIRSF004640 1 364 4.9E-147 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 D172_021025 3bd4bc3d9d3ca7691e9aa09373f8c486 372 Pfam PF04551 GcpE protein 13 353 1.1E-134 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 D172_021025 3bd4bc3d9d3ca7691e9aa09373f8c486 372 Gene3D G3DSA:3.30.413.10 262 363 3.4E-24 T 14-10-2018 D172_021025 3bd4bc3d9d3ca7691e9aa09373f8c486 372 Gene3D G3DSA:3.20.20.20 1 261 8.5E-107 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_021025 3bd4bc3d9d3ca7691e9aa09373f8c486 372 SUPERFAMILY SSF51717 16 208 2.59E-11 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_021025 3bd4bc3d9d3ca7691e9aa09373f8c486 372 SUPERFAMILY SSF56014 265 362 6.87E-14 T 14-10-2018 D172_021025 3bd4bc3d9d3ca7691e9aa09373f8c486 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 358 35.151 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 D172_021025 3bd4bc3d9d3ca7691e9aa09373f8c486 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 5.3E-128 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 Gene3D G3DSA:2.10.230.10 140 210 4.6E-25 T 14-10-2018 D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 Pfam PF01556 DnaJ C terminal domain 122 334 3.2E-43 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 SMART SM00271 4 62 4.5E-27 T 14-10-2018 IPR001623 DnaJ domain D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 41.966 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 Pfam PF00226 DnaJ domain 5 67 5.7E-26 T 14-10-2018 IPR001623 DnaJ domain D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 PRINTS PR00625 DnaJ domain signature 25 40 7.3E-31 T 14-10-2018 IPR001623 DnaJ domain D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 PRINTS PR00625 DnaJ domain signature 7 25 7.3E-31 T 14-10-2018 IPR001623 DnaJ domain D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 PRINTS PR00625 DnaJ domain signature 62 81 7.3E-31 T 14-10-2018 IPR001623 DnaJ domain D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 PRINTS PR00625 DnaJ domain signature 42 62 7.3E-31 T 14-10-2018 IPR001623 DnaJ domain D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 Gene3D G3DSA:2.60.260.20 256 366 2.3E-27 T 14-10-2018 D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 350 4.6E-139 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 Gene3D G3DSA:1.10.287.110 1 113 1.3E-35 T 14-10-2018 IPR036869 Chaperone J-domain superfamily D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 SUPERFAMILY SSF46565 1 108 1.83E-34 T 14-10-2018 IPR036869 Chaperone J-domain superfamily D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 SUPERFAMILY SSF49493 114 268 1.44E-21 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 SUPERFAMILY SSF57938 135 212 1.02E-22 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 Pfam PF00684 DnaJ central domain 148 208 6.6E-15 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 D172_019015 86f1d4ededdd6e85b4fff09151628ff4 379 SUPERFAMILY SSF49493 260 345 4.06E-20 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 D172_012595 da924f60622f0bbadcb1b42cd53419b8 54 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 27 1.6E-17 T 14-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 D172_012595 da924f60622f0bbadcb1b42cd53419b8 54 Pfam PF08173 Membrane bound YbgT-like protein 1 26 3.9E-16 T 14-10-2018 IPR012994 Membrane bound YbgT-like D172_003505 55c419b800b292099ba0d0a079273447 142 PIRSF PIRSF002181 1 142 1.2E-51 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 D172_003505 55c419b800b292099ba0d0a079273447 142 Pfam PF00572 Ribosomal protein L13 15 138 2.3E-57 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 D172_003505 55c419b800b292099ba0d0a079273447 142 Gene3D G3DSA:3.90.1180.10 1 142 4.9E-64 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 D172_003505 55c419b800b292099ba0d0a079273447 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.72 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 D172_003505 55c419b800b292099ba0d0a079273447 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 8.0E-66 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003505 55c419b800b292099ba0d0a079273447 142 SUPERFAMILY SSF52161 1 140 2.22E-60 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 D172_003505 55c419b800b292099ba0d0a079273447 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 D172_019495 4bd09f4e423d57d60016b62f65623398 742 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 117 736 1.3E-260 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 D172_019495 4bd09f4e423d57d60016b62f65623398 742 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 108 739 41.597 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 D172_019495 4bd09f4e423d57d60016b62f65623398 742 SUPERFAMILY SSF81296 26 121 7.56E-9 T 14-10-2018 IPR014756 Immunoglobulin E-set D172_019495 4bd09f4e423d57d60016b62f65623398 742 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 132 214 2.7E-20 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 D172_019495 4bd09f4e423d57d60016b62f65623398 742 SMART SM00642 258 618 8.1E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D172_019495 4bd09f4e423d57d60016b62f65623398 742 Gene3D G3DSA:2.60.40.10 13 228 1.2E-58 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_019495 4bd09f4e423d57d60016b62f65623398 742 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 636 738 4.9E-18 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 D172_019495 4bd09f4e423d57d60016b62f65623398 742 Gene3D G3DSA:3.20.20.80 241 620 1.9E-159 T 14-10-2018 D172_019495 4bd09f4e423d57d60016b62f65623398 742 SUPERFAMILY SSF81296 127 227 8.92E-29 T 14-10-2018 IPR014756 Immunoglobulin E-set D172_019495 4bd09f4e423d57d60016b62f65623398 742 PIRSF PIRSF000463 16 742 4.9E-275 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 D172_019495 4bd09f4e423d57d60016b62f65623398 742 SUPERFAMILY SSF51445 243 626 5.69E-104 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_019495 4bd09f4e423d57d60016b62f65623398 742 SUPERFAMILY SSF51011 632 739 7.77E-25 T 14-10-2018 D172_019495 4bd09f4e423d57d60016b62f65623398 742 Gene3D G3DSA:2.60.40.1180 631 740 3.4E-27 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta D172_011410 da6e96a46b90852045cf9f1de48d4ee1 97 Gene3D G3DSA:1.10.10.60 8 89 1.6E-12 T 14-10-2018 D172_011410 da6e96a46b90852045cf9f1de48d4ee1 97 SUPERFAMILY SSF46689 3 95 5.55E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_011410 da6e96a46b90852045cf9f1de48d4ee1 97 Pfam PF01527 Transposase 1 75 1.8E-17 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_009365 da6e96a46b90852045cf9f1de48d4ee1 97 Gene3D G3DSA:1.10.10.60 8 89 1.6E-12 T 14-10-2018 D172_009365 da6e96a46b90852045cf9f1de48d4ee1 97 SUPERFAMILY SSF46689 3 95 5.55E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_009365 da6e96a46b90852045cf9f1de48d4ee1 97 Pfam PF01527 Transposase 1 75 1.8E-17 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_001520 da6e96a46b90852045cf9f1de48d4ee1 97 Gene3D G3DSA:1.10.10.60 8 89 1.6E-12 T 14-10-2018 D172_001520 da6e96a46b90852045cf9f1de48d4ee1 97 SUPERFAMILY SSF46689 3 95 5.55E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_001520 da6e96a46b90852045cf9f1de48d4ee1 97 Pfam PF01527 Transposase 1 75 1.8E-17 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_011550 da6e96a46b90852045cf9f1de48d4ee1 97 Gene3D G3DSA:1.10.10.60 8 89 1.6E-12 T 14-10-2018 D172_011550 da6e96a46b90852045cf9f1de48d4ee1 97 SUPERFAMILY SSF46689 3 95 5.55E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_011550 da6e96a46b90852045cf9f1de48d4ee1 97 Pfam PF01527 Transposase 1 75 1.8E-17 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_020720 da6e96a46b90852045cf9f1de48d4ee1 97 Gene3D G3DSA:1.10.10.60 8 89 1.6E-12 T 14-10-2018 D172_020720 da6e96a46b90852045cf9f1de48d4ee1 97 SUPERFAMILY SSF46689 3 95 5.55E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_020720 da6e96a46b90852045cf9f1de48d4ee1 97 Pfam PF01527 Transposase 1 75 1.8E-17 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_006605 da6e96a46b90852045cf9f1de48d4ee1 97 Gene3D G3DSA:1.10.10.60 8 89 1.6E-12 T 14-10-2018 D172_006605 da6e96a46b90852045cf9f1de48d4ee1 97 SUPERFAMILY SSF46689 3 95 5.55E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_006605 da6e96a46b90852045cf9f1de48d4ee1 97 Pfam PF01527 Transposase 1 75 1.8E-17 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_017330 da6e96a46b90852045cf9f1de48d4ee1 97 Gene3D G3DSA:1.10.10.60 8 89 1.6E-12 T 14-10-2018 D172_017330 da6e96a46b90852045cf9f1de48d4ee1 97 SUPERFAMILY SSF46689 3 95 5.55E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_017330 da6e96a46b90852045cf9f1de48d4ee1 97 Pfam PF01527 Transposase 1 75 1.8E-17 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_012225 da6e96a46b90852045cf9f1de48d4ee1 97 Gene3D G3DSA:1.10.10.60 8 89 1.6E-12 T 14-10-2018 D172_012225 da6e96a46b90852045cf9f1de48d4ee1 97 SUPERFAMILY SSF46689 3 95 5.55E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_012225 da6e96a46b90852045cf9f1de48d4ee1 97 Pfam PF01527 Transposase 1 75 1.8E-17 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_018105 da6e96a46b90852045cf9f1de48d4ee1 97 Gene3D G3DSA:1.10.10.60 8 89 1.6E-12 T 14-10-2018 D172_018105 da6e96a46b90852045cf9f1de48d4ee1 97 SUPERFAMILY SSF46689 3 95 5.55E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_018105 da6e96a46b90852045cf9f1de48d4ee1 97 Pfam PF01527 Transposase 1 75 1.8E-17 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_014115 da6e96a46b90852045cf9f1de48d4ee1 97 Gene3D G3DSA:1.10.10.60 8 89 1.6E-12 T 14-10-2018 D172_014115 da6e96a46b90852045cf9f1de48d4ee1 97 SUPERFAMILY SSF46689 3 95 5.55E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_014115 da6e96a46b90852045cf9f1de48d4ee1 97 Pfam PF01527 Transposase 1 75 1.8E-17 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_001670 e2cf80217245d607cb492ee50b588d60 549 Gene3D G3DSA:3.30.260.10 136 411 2.0E-237 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily D172_001670 e2cf80217245d607cb492ee50b588d60 549 SUPERFAMILY SSF52029 185 377 5.58E-83 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily D172_001670 e2cf80217245d607cb492ee50b588d60 549 Gene3D G3DSA:1.10.560.10 8 522 2.0E-237 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily D172_001670 e2cf80217245d607cb492ee50b588d60 549 SUPERFAMILY SSF48592 8 522 3.5E-76 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily D172_001670 e2cf80217245d607cb492ee50b588d60 549 SUPERFAMILY SSF54849 137 204 4.35E-23 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily D172_001670 e2cf80217245d607cb492ee50b588d60 549 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 2.4E-94 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 D172_001670 e2cf80217245d607cb492ee50b588d60 549 ProSitePatterns PS00296 Chaperonins cpn60 signature. 406 417 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D172_001670 e2cf80217245d607cb492ee50b588d60 549 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 8.5E-252 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D172_001670 e2cf80217245d607cb492ee50b588d60 549 Gene3D G3DSA:3.50.7.10 193 373 2.0E-237 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily D172_001670 e2cf80217245d607cb492ee50b588d60 549 Hamap MF_00600 60 kDa chaperonin [groL]. 2 548 41.062 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D172_001670 e2cf80217245d607cb492ee50b588d60 549 PRINTS PR00298 60kDa chaperonin signature 399 420 8.2E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D172_001670 e2cf80217245d607cb492ee50b588d60 549 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D172_001670 e2cf80217245d607cb492ee50b588d60 549 PRINTS PR00298 60kDa chaperonin signature 351 376 8.2E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D172_001670 e2cf80217245d607cb492ee50b588d60 549 PRINTS PR00298 60kDa chaperonin signature 269 292 8.2E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D172_001670 e2cf80217245d607cb492ee50b588d60 549 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 D172_020560 072f594eb5387b1e71b9d55ee157a22d 70 Gene3D G3DSA:3.90.820.10 1 69 2.2E-29 T 14-10-2018 D172_020560 072f594eb5387b1e71b9d55ee157a22d 70 SMART SM00923 4 54 2.9E-21 T 14-10-2018 IPR005153 MbtH-like domain D172_020560 072f594eb5387b1e71b9d55ee157a22d 70 SUPERFAMILY SSF160582 4 67 1.96E-26 T 14-10-2018 IPR038020 MbtH-like domain superfamily D172_020560 072f594eb5387b1e71b9d55ee157a22d 70 Pfam PF03621 MbtH-like protein 3 52 4.6E-23 T 14-10-2018 IPR005153 MbtH-like domain D172_019100 c1d7a93afc3aff15e07b4f2a0c5dbcdc 332 SMART SM00267 167 331 6.6E-39 T 14-10-2018 IPR000160 GGDEF domain D172_019100 c1d7a93afc3aff15e07b4f2a0c5dbcdc 332 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 174 331 1.5E-39 T 14-10-2018 IPR000160 GGDEF domain D172_019100 c1d7a93afc3aff15e07b4f2a0c5dbcdc 332 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 329 2.0E-34 T 14-10-2018 IPR000160 GGDEF domain D172_019100 c1d7a93afc3aff15e07b4f2a0c5dbcdc 332 Gene3D G3DSA:3.30.70.270 166 331 1.4E-44 T 14-10-2018 D172_019100 c1d7a93afc3aff15e07b4f2a0c5dbcdc 332 SUPERFAMILY SSF55073 183 331 2.75E-37 T 14-10-2018 IPR029787 Nucleotide cyclase D172_010660 69d219310495d22ea8cc42f5ede3d0ea 199 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 16 177 9.5E-11 T 14-10-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 D172_002140 2e32400651a66545958385da656a339f 273 Gene3D G3DSA:3.40.50.150 29 230 9.9E-22 T 14-10-2018 D172_002140 2e32400651a66545958385da656a339f 273 SUPERFAMILY SSF53335 44 228 6.72E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_002140 2e32400651a66545958385da656a339f 273 PIRSF PIRSF031679 1 273 2.0E-109 T 14-10-2018 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted D172_012590 9a4c3e3269a0928c0676d66cf5b74fbc 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 3 379 1.2E-151 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 D172_012590 9a4c3e3269a0928c0676d66cf5b74fbc 379 PIRSF PIRSF000267 3 378 1.3E-117 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 D172_012590 9a4c3e3269a0928c0676d66cf5b74fbc 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 8 361 2.6E-98 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 D172_013440 f9f53043cdafc85af0c09384469a3c88 479 Pfam PF02954 Bacterial regulatory protein, Fis family 430 469 3.4E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_013440 f9f53043cdafc85af0c09384469a3c88 479 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 214 229 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D172_013440 f9f53043cdafc85af0c09384469a3c88 479 Pfam PF00158 Sigma-54 interaction domain 132 294 4.1E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D172_013440 f9f53043cdafc85af0c09384469a3c88 479 Gene3D G3DSA:3.40.50.2300 2 118 7.2E-34 T 14-10-2018 D172_013440 f9f53043cdafc85af0c09384469a3c88 479 SMART SM00382 148 292 2.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_013440 f9f53043cdafc85af0c09384469a3c88 479 SUPERFAMILY SSF46689 341 469 2.33E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_013440 f9f53043cdafc85af0c09384469a3c88 479 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 341 350 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site D172_013440 f9f53043cdafc85af0c09384469a3c88 479 Gene3D G3DSA:3.40.50.300 119 299 3.7E-62 T 14-10-2018 D172_013440 f9f53043cdafc85af0c09384469a3c88 479 Gene3D G3DSA:1.10.10.60 414 476 1.0E-10 T 14-10-2018 D172_013440 f9f53043cdafc85af0c09384469a3c88 479 Gene3D G3DSA:1.10.8.60 300 378 1.3E-21 T 14-10-2018 D172_013440 f9f53043cdafc85af0c09384469a3c88 479 SUPERFAMILY SSF52540 136 367 1.48E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_013440 f9f53043cdafc85af0c09384469a3c88 479 SUPERFAMILY SSF52172 5 172 6.12E-41 T 14-10-2018 IPR011006 CheY-like superfamily D172_013440 f9f53043cdafc85af0c09384469a3c88 479 SMART SM00448 3 114 1.4E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_013440 f9f53043cdafc85af0c09384469a3c88 479 Pfam PF00072 Response regulator receiver domain 5 114 4.1E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_009530 bd89ea4d353df9e8ac4efbf960e82245 336 Gene3D G3DSA:3.40.50.1170 1 208 7.0E-83 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 D172_009530 bd89ea4d353df9e8ac4efbf960e82245 336 SMART SM00870 5 323 3.0E-133 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D172_009530 bd89ea4d353df9e8ac4efbf960e82245 336 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 D172_009530 bd89ea4d353df9e8ac4efbf960e82245 336 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 335 2.9E-110 T 14-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 D172_009530 bd89ea4d353df9e8ac4efbf960e82245 336 PIRSF PIRSF500176 2 332 5.0E-103 T 14-10-2018 D172_009530 bd89ea4d353df9e8ac4efbf960e82245 336 Gene3D G3DSA:3.40.50.40 209 335 1.7E-44 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 D172_009530 bd89ea4d353df9e8ac4efbf960e82245 336 Pfam PF00710 Asparaginase, N-terminal 5 189 4.1E-64 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 D172_009530 bd89ea4d353df9e8ac4efbf960e82245 336 PIRSF PIRSF001220 1 334 9.4E-91 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D172_009530 bd89ea4d353df9e8ac4efbf960e82245 336 SUPERFAMILY SSF53774 3 335 1.96E-108 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 D172_009530 bd89ea4d353df9e8ac4efbf960e82245 336 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 3.6E-16 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D172_009530 bd89ea4d353df9e8ac4efbf960e82245 336 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 3.6E-16 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D172_009530 bd89ea4d353df9e8ac4efbf960e82245 336 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 3.6E-16 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 D172_009530 bd89ea4d353df9e8ac4efbf960e82245 336 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 D172_018195 3be666f7bf4b353e0a13d46c88a03b25 212 Pfam PF00005 ABC transporter 22 162 1.8E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_018195 3be666f7bf4b353e0a13d46c88a03b25 212 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_018195 3be666f7bf4b353e0a13d46c88a03b25 212 SMART SM00382 28 211 2.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_018195 3be666f7bf4b353e0a13d46c88a03b25 212 SUPERFAMILY SSF52540 5 209 4.26E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_018195 3be666f7bf4b353e0a13d46c88a03b25 212 Gene3D G3DSA:3.40.50.300 2 211 2.1E-48 T 14-10-2018 D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 Pfam PF04542 Sigma-70 region 2 86 155 3.6E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 Pfam PF00140 Sigma-70 factor, region 1.2 48 77 7.0E-9 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 279 305 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 110 123 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 PRINTS PR00046 Major sigma-70 factor signature 258 270 3.0E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 PRINTS PR00046 Major sigma-70 factor signature 294 305 3.0E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 PRINTS PR00046 Major sigma-70 factor signature 110 123 3.0E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 PRINTS PR00046 Major sigma-70 factor signature 134 142 3.0E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 PRINTS PR00046 Major sigma-70 factor signature 279 294 3.0E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 SUPERFAMILY SSF88659 216 314 2.43E-25 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 Pfam PF04545 Sigma-70, region 4 254 306 2.2E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 Gene3D G3DSA:1.10.10.10 159 234 2.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 6 320 39.331 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 SUPERFAMILY SSF88659 159 233 6.1E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 39 320 1.2E-140 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 SUPERFAMILY SSF88946 27 153 9.42E-44 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 83 308 6.5E-37 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 Gene3D G3DSA:1.10.601.10 4 155 1.5E-46 T 14-10-2018 D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 Gene3D G3DSA:1.10.10.10 236 312 2.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_004645 9f2ea286f089de0c852c2faa8f47b7b0 324 Pfam PF04539 Sigma-70 region 3 166 239 3.5E-22 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 D172_009790 ca96772b6276b0db1acdb5289ce4a314 338 SUPERFAMILY SSF47413 4 62 1.48E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D172_009790 ca96772b6276b0db1acdb5289ce4a314 338 Gene3D G3DSA:3.40.50.2300 169 335 1.4E-57 T 14-10-2018 D172_009790 ca96772b6276b0db1acdb5289ce4a314 338 SMART SM00354 4 77 3.6E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_009790 ca96772b6276b0db1acdb5289ce4a314 338 Gene3D G3DSA:3.40.50.2300 81 330 1.4E-57 T 14-10-2018 D172_009790 ca96772b6276b0db1acdb5289ce4a314 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 49 2.6E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_009790 ca96772b6276b0db1acdb5289ce4a314 338 Pfam PF13377 Periplasmic binding protein-like domain 179 338 1.0E-32 T 14-10-2018 D172_009790 ca96772b6276b0db1acdb5289ce4a314 338 Gene3D G3DSA:1.10.260.40 1 62 2.0E-19 T 14-10-2018 D172_009790 ca96772b6276b0db1acdb5289ce4a314 338 SUPERFAMILY SSF53822 79 337 8.83E-52 T 14-10-2018 IPR028082 Periplasmic binding protein-like I D172_012760 75ef918fa825ed5307048e446b9bfe9d 297 SUPERFAMILY SSF161098 90 277 9.55E-23 T 14-10-2018 IPR035906 MetI-like superfamily D172_012760 75ef918fa825ed5307048e446b9bfe9d 297 Gene3D G3DSA:1.10.3720.10 85 293 5.8E-20 T 14-10-2018 IPR035906 MetI-like superfamily D172_012760 75ef918fa825ed5307048e446b9bfe9d 297 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 1.5E-12 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain D172_012760 75ef918fa825ed5307048e446b9bfe9d 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 294 2.9E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D172_009520 9b0c1e265a18fb9d60ff2b01dd512a47 653 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 600 616 1.9E-12 T 14-10-2018 D172_009520 9b0c1e265a18fb9d60ff2b01dd512a47 653 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 493 511 1.9E-12 T 14-10-2018 D172_009520 9b0c1e265a18fb9d60ff2b01dd512a47 653 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 373 392 1.9E-12 T 14-10-2018 D172_009520 9b0c1e265a18fb9d60ff2b01dd512a47 653 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 602 623 1.1E-5 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_009520 9b0c1e265a18fb9d60ff2b01dd512a47 653 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 372 394 1.1E-5 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_009520 9b0c1e265a18fb9d60ff2b01dd512a47 653 Gene3D G3DSA:3.40.50.720 371 646 1.3E-94 T 14-10-2018 D172_009520 9b0c1e265a18fb9d60ff2b01dd512a47 653 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 371 621 9.7E-23 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D172_009520 9b0c1e265a18fb9d60ff2b01dd512a47 653 Gene3D G3DSA:3.20.20.70 1 363 1.1E-112 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_009520 9b0c1e265a18fb9d60ff2b01dd512a47 653 SUPERFAMILY SSF51395 2 354 6.6E-102 T 14-10-2018 D172_009520 9b0c1e265a18fb9d60ff2b01dd512a47 653 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 321 1.4E-70 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 D172_009520 9b0c1e265a18fb9d60ff2b01dd512a47 653 Gene3D G3DSA:3.50.50.60 465 608 1.3E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_009520 9b0c1e265a18fb9d60ff2b01dd512a47 653 SUPERFAMILY SSF51905 330 619 9.58E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_011495 94f7f86f8757f4ebfe93e8f83966ab46 646 SMART SM00267 222 391 3.2E-10 T 14-10-2018 IPR000160 GGDEF domain D172_011495 94f7f86f8757f4ebfe93e8f83966ab46 646 Gene3D G3DSA:3.20.20.450 405 645 5.0E-47 T 14-10-2018 IPR035919 EAL domain superfamily D172_011495 94f7f86f8757f4ebfe93e8f83966ab46 646 SUPERFAMILY SSF141868 413 643 3.53E-47 T 14-10-2018 IPR035919 EAL domain superfamily D172_011495 94f7f86f8757f4ebfe93e8f83966ab46 646 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 230 389 3.8E-10 T 14-10-2018 IPR000160 GGDEF domain D172_011495 94f7f86f8757f4ebfe93e8f83966ab46 646 SMART SM00052 405 646 6.6E-17 T 14-10-2018 IPR001633 EAL domain D172_011495 94f7f86f8757f4ebfe93e8f83966ab46 646 Pfam PF00563 EAL domain 413 643 1.4E-47 T 14-10-2018 IPR001633 EAL domain D172_011495 94f7f86f8757f4ebfe93e8f83966ab46 646 Pfam PF00990 Diguanylate cyclase, GGDEF domain 233 384 1.7E-18 T 14-10-2018 IPR000160 GGDEF domain D172_011495 94f7f86f8757f4ebfe93e8f83966ab46 646 Gene3D G3DSA:3.30.70.270 218 391 1.1E-24 T 14-10-2018 D172_011495 94f7f86f8757f4ebfe93e8f83966ab46 646 SUPERFAMILY SSF55073 239 390 1.49E-19 T 14-10-2018 IPR029787 Nucleotide cyclase D172_015910 d9bbabc76fa679925c2643da6d149446 172 PIRSF PIRSF039093 1 172 1.8E-86 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 D172_015910 d9bbabc76fa679925c2643da6d149446 172 Pfam PF00227 Proteasome subunit 2 166 7.8E-21 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 D172_015910 d9bbabc76fa679925c2643da6d149446 172 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 1.3E-85 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 D172_015910 d9bbabc76fa679925c2643da6d149446 172 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.51 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 D172_015910 d9bbabc76fa679925c2643da6d149446 172 SUPERFAMILY SSF56235 1 171 5.9E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_015910 d9bbabc76fa679925c2643da6d149446 172 Gene3D G3DSA:3.60.20.10 1 172 6.2E-65 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_001550 5383f9315a2f61f4bb10bf10e8d7065c 474 Gene3D G3DSA:2.40.30.10 245 330 6.7E-26 T 14-10-2018 D172_001550 5383f9315a2f61f4bb10bf10e8d7065c 474 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 21 473 49.627 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 D172_001550 5383f9315a2f61f4bb10bf10e8d7065c 474 PRINTS PR00315 GTP-binding elongation factor signature 128 139 2.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001550 5383f9315a2f61f4bb10bf10e8d7065c 474 PRINTS PR00315 GTP-binding elongation factor signature 31 44 2.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001550 5383f9315a2f61f4bb10bf10e8d7065c 474 PRINTS PR00315 GTP-binding elongation factor signature 92 100 2.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001550 5383f9315a2f61f4bb10bf10e8d7065c 474 PRINTS PR00315 GTP-binding elongation factor signature 165 174 2.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001550 5383f9315a2f61f4bb10bf10e8d7065c 474 PRINTS PR00315 GTP-binding elongation factor signature 112 122 2.8E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001550 5383f9315a2f61f4bb10bf10e8d7065c 474 SUPERFAMILY SSF52540 25 237 1.88E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_001550 5383f9315a2f61f4bb10bf10e8d7065c 474 SUPERFAMILY SSF50465 334 435 1.15E-32 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal D172_001550 5383f9315a2f61f4bb10bf10e8d7065c 474 Gene3D G3DSA:3.40.50.300 9 239 5.1E-68 T 14-10-2018 D172_001550 5383f9315a2f61f4bb10bf10e8d7065c 474 Pfam PF00009 Elongation factor Tu GTP binding domain 29 215 4.5E-44 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001550 5383f9315a2f61f4bb10bf10e8d7065c 474 SUPERFAMILY SSF50447 246 330 1.35E-22 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D172_001550 5383f9315a2f61f4bb10bf10e8d7065c 474 Gene3D G3DSA:2.40.30.10 333 436 5.7E-35 T 14-10-2018 D172_001550 5383f9315a2f61f4bb10bf10e8d7065c 474 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 85 100 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site D172_001550 5383f9315a2f61f4bb10bf10e8d7065c 474 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 35 215 2.2E-13 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D172_001550 5383f9315a2f61f4bb10bf10e8d7065c 474 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 30 435 9.6E-187 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 D172_003780 1bca8c8fd451b2934502e3032a017b46 360 SUPERFAMILY SSF101790 270 357 7.52E-23 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal D172_003780 1bca8c8fd451b2934502e3032a017b46 360 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 355 42.833 T 14-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 D172_003780 1bca8c8fd451b2934502e3032a017b46 360 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 355 2.4E-141 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 D172_003780 1bca8c8fd451b2934502e3032a017b46 360 PIRSF PIRSF006487 1 359 8.3E-83 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 D172_003780 1bca8c8fd451b2934502e3032a017b46 360 Gene3D G3DSA:3.30.1360.120 7 231 2.5E-86 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 D172_003780 1bca8c8fd451b2934502e3032a017b46 360 Gene3D G3DSA:3.30.70.1400 51 138 2.5E-86 T 14-10-2018 D172_003780 1bca8c8fd451b2934502e3032a017b46 360 Gene3D G3DSA:4.10.1250.10 232 276 3.7E-25 T 14-10-2018 D172_003780 1bca8c8fd451b2934502e3032a017b46 360 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 253 1.1E-84 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain D172_003780 1bca8c8fd451b2934502e3032a017b46 360 SUPERFAMILY SSF103025 4 275 7.59E-91 T 14-10-2018 D172_003780 1bca8c8fd451b2934502e3032a017b46 360 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 350 1.2E-18 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 D172_003780 1bca8c8fd451b2934502e3032a017b46 360 Gene3D G3DSA:2.40.30.110 278 360 3.9E-29 T 14-10-2018 D172_010735 8181d85d75aeffb23a8c7b404156deb6 440 SUPERFAMILY SSF161070 5 437 4.45E-110 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 D172_010735 8181d85d75aeffb23a8c7b404156deb6 440 Pfam PF00209 Sodium:neurotransmitter symporter family 5 134 3.7E-21 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D172_010735 8181d85d75aeffb23a8c7b404156deb6 440 Pfam PF00209 Sodium:neurotransmitter symporter family 151 435 7.6E-24 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D172_010735 8181d85d75aeffb23a8c7b404156deb6 440 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 2.6E-8 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D172_010735 8181d85d75aeffb23a8c7b404156deb6 440 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 2.6E-8 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D172_006050 8101f1985c6fd63f1c764cb9511338c7 301 SUPERFAMILY SSF50891 58 245 1.9E-32 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily D172_006050 8101f1985c6fd63f1c764cb9511338c7 301 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 57 234 7.3E-32 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D172_006050 8101f1985c6fd63f1c764cb9511338c7 301 Gene3D G3DSA:2.40.100.10 18 245 6.9E-37 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily D172_002000 900d9f1d50ad7f25f80ed1a29514d941 375 Gene3D G3DSA:3.20.20.105 1 366 1.3E-165 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D172_002000 900d9f1d50ad7f25f80ed1a29514d941 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 362 55.699 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D172_002000 900d9f1d50ad7f25f80ed1a29514d941 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 359 4.7E-90 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D172_002000 900d9f1d50ad7f25f80ed1a29514d941 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 366 2.3E-169 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D172_002000 900d9f1d50ad7f25f80ed1a29514d941 375 SUPERFAMILY SSF51713 1 362 3.27E-161 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D172_002000 900d9f1d50ad7f25f80ed1a29514d941 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 365 2.9E-162 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 D172_004000 2e38d676022b1a7607caa34aa7094010 951 SUPERFAMILY SSF46589 884 948 6.28E-13 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 D172_004000 2e38d676022b1a7607caa34aa7094010 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 628 3.6E-217 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_004000 2e38d676022b1a7607caa34aa7094010 951 PRINTS PR00986 Valyl-tRNA synthetase signature 33 44 3.2E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D172_004000 2e38d676022b1a7607caa34aa7094010 951 PRINTS PR00986 Valyl-tRNA synthetase signature 497 515 3.2E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D172_004000 2e38d676022b1a7607caa34aa7094010 951 PRINTS PR00986 Valyl-tRNA synthetase signature 234 251 3.2E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D172_004000 2e38d676022b1a7607caa34aa7094010 951 PRINTS PR00986 Valyl-tRNA synthetase signature 366 379 3.2E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D172_004000 2e38d676022b1a7607caa34aa7094010 951 PRINTS PR00986 Valyl-tRNA synthetase signature 466 487 3.2E-35 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D172_004000 2e38d676022b1a7607caa34aa7094010 951 SUPERFAMILY SSF47323 639 898 1.87E-74 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_004000 2e38d676022b1a7607caa34aa7094010 951 Gene3D G3DSA:1.10.730.10 573 817 3.9E-72 T 14-10-2018 D172_004000 2e38d676022b1a7607caa34aa7094010 951 Pfam PF08264 Anticodon-binding domain of tRNA 672 825 2.0E-45 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 D172_004000 2e38d676022b1a7607caa34aa7094010 951 SUPERFAMILY SSF50677 189 362 4.19E-56 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D172_004000 2e38d676022b1a7607caa34aa7094010 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 884 947 2.2E-14 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 D172_004000 2e38d676022b1a7607caa34aa7094010 951 Gene3D G3DSA:3.40.50.620 2 200 3.1E-63 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_004000 2e38d676022b1a7607caa34aa7094010 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 15.991 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D172_004000 2e38d676022b1a7607caa34aa7094010 951 SUPERFAMILY SSF52374 1 638 2.69E-135 T 14-10-2018 D172_004000 2e38d676022b1a7607caa34aa7094010 951 Gene3D G3DSA:1.10.287.380 877 948 9.4E-17 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 D172_004000 2e38d676022b1a7607caa34aa7094010 951 Gene3D G3DSA:3.90.740.10 237 337 3.9E-8 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D172_004000 2e38d676022b1a7607caa34aa7094010 951 Gene3D G3DSA:3.40.50.620 338 552 5.0E-72 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_004000 2e38d676022b1a7607caa34aa7094010 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 931 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 D172_004000 2e38d676022b1a7607caa34aa7094010 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_016415 e22d117bd96f18ebc43103bd3da43170 532 SMART SM00304 201 255 1.9E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_016415 e22d117bd96f18ebc43103bd3da43170 532 Pfam PF00672 HAMP domain 204 252 3.1E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_016415 e22d117bd96f18ebc43103bd3da43170 532 SMART SM00283 270 531 1.7E-57 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_016415 e22d117bd96f18ebc43103bd3da43170 532 Gene3D G3DSA:1.10.287.950 200 532 8.4E-68 T 14-10-2018 D172_016415 e22d117bd96f18ebc43103bd3da43170 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 368 395 2.9E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_016415 e22d117bd96f18ebc43103bd3da43170 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 2.9E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_016415 e22d117bd96f18ebc43103bd3da43170 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 445 474 2.9E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_016415 e22d117bd96f18ebc43103bd3da43170 532 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 2.9E-25 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_016415 e22d117bd96f18ebc43103bd3da43170 532 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 497 2.8E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_016415 e22d117bd96f18ebc43103bd3da43170 532 SUPERFAMILY SSF58104 223 532 1.05E-69 T 14-10-2018 D172_010225 c3e400f027277f6a9f9af1596c85ca5f 345 Pfam PF01594 AI-2E family transporter 11 324 5.3E-60 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like D172_004715 19f1ebfd7d484394ac10ba895c8f0b28 454 Pfam PF16933 Putative exopolysaccharide Exporter (EPS-E) 1 451 3.3E-155 T 14-10-2018 IPR031617 Putative exopolysaccharide exporter D172_010930 c4927175bb26387f0dafe79ad90dcdc1 265 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 102 262 2.4E-44 T 14-10-2018 IPR000160 GGDEF domain D172_010930 c4927175bb26387f0dafe79ad90dcdc1 265 Pfam PF00990 Diguanylate cyclase, GGDEF domain 105 261 3.9E-43 T 14-10-2018 IPR000160 GGDEF domain D172_010930 c4927175bb26387f0dafe79ad90dcdc1 265 SUPERFAMILY SSF55073 110 263 2.67E-41 T 14-10-2018 IPR029787 Nucleotide cyclase D172_010930 c4927175bb26387f0dafe79ad90dcdc1 265 SMART SM00267 94 265 2.3E-54 T 14-10-2018 IPR000160 GGDEF domain D172_010930 c4927175bb26387f0dafe79ad90dcdc1 265 Gene3D G3DSA:3.30.70.270 99 265 1.6E-48 T 14-10-2018 D172_001640 51c8c2444144bf682da359c57c2a5026 704 Pfam PF14492 Elongation Factor G, domain II 409 483 1.6E-32 T 14-10-2018 D172_001640 51c8c2444144bf682da359c57c2a5026 704 Pfam PF00679 Elongation factor G C-terminus 609 696 8.2E-29 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like D172_001640 51c8c2444144bf682da359c57c2a5026 704 SMART SM00838 609 697 1.4E-51 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like D172_001640 51c8c2444144bf682da359c57c2a5026 704 SUPERFAMILY SSF54980 612 699 2.16E-27 T 14-10-2018 IPR035647 EF-G domain III/V-like D172_001640 51c8c2444144bf682da359c57c2a5026 704 Gene3D G3DSA:2.40.30.10 299 421 6.5E-49 T 14-10-2018 D172_001640 51c8c2444144bf682da359c57c2a5026 704 SUPERFAMILY SSF54211 484 608 2.07E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_001640 51c8c2444144bf682da359c57c2a5026 704 SUPERFAMILY SSF54980 407 485 5.04E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like D172_001640 51c8c2444144bf682da359c57c2a5026 704 Pfam PF03144 Elongation factor Tu domain 2 329 396 2.4E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D172_001640 51c8c2444144bf682da359c57c2a5026 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 701 110.605 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D172_001640 51c8c2444144bf682da359c57c2a5026 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 8.3E-68 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001640 51c8c2444144bf682da359c57c2a5026 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.8E-36 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D172_001640 51c8c2444144bf682da359c57c2a5026 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 701 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D172_001640 51c8c2444144bf682da359c57c2a5026 704 Gene3D G3DSA:3.30.70.240 613 684 4.0E-85 T 14-10-2018 D172_001640 51c8c2444144bf682da359c57c2a5026 704 SMART SM00889 485 607 1.4E-69 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 D172_001640 51c8c2444144bf682da359c57c2a5026 704 Gene3D G3DSA:3.30.230.10 489 697 4.0E-85 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D172_001640 51c8c2444144bf682da359c57c2a5026 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.7E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001640 51c8c2444144bf682da359c57c2a5026 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.7E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001640 51c8c2444144bf682da359c57c2a5026 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 3.7E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001640 51c8c2444144bf682da359c57c2a5026 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 3.7E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001640 51c8c2444144bf682da359c57c2a5026 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.7E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001640 51c8c2444144bf682da359c57c2a5026 704 SUPERFAMILY SSF50447 255 407 7.29E-35 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D172_001640 51c8c2444144bf682da359c57c2a5026 704 Gene3D G3DSA:3.40.50.300 1 298 9.4E-120 T 14-10-2018 D172_001640 51c8c2444144bf682da359c57c2a5026 704 Pfam PF03764 Elongation factor G, domain IV 484 607 8.4E-43 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 D172_001640 51c8c2444144bf682da359c57c2a5026 704 SUPERFAMILY SSF52540 6 288 1.71E-109 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_001640 51c8c2444144bf682da359c57c2a5026 704 Gene3D G3DSA:3.30.70.870 438 488 7.4E-25 T 14-10-2018 D172_001640 51c8c2444144bf682da359c57c2a5026 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site D172_000710 d5877faab27ab8e9f9eaee40697461fc 230 Gene3D G3DSA:3.10.290.10 2 56 1.3E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D172_000710 d5877faab27ab8e9f9eaee40697461fc 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 D172_000710 d5877faab27ab8e9f9eaee40697461fc 230 SMART SM00363 5 62 5.4E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_000710 d5877faab27ab8e9f9eaee40697461fc 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 219 8.5E-36 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 D172_000710 d5877faab27ab8e9f9eaee40697461fc 230 SUPERFAMILY SSF55120 65 218 1.67E-32 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_000710 d5877faab27ab8e9f9eaee40697461fc 230 SUPERFAMILY SSF55174 4 93 6.56E-11 T 14-10-2018 D172_000710 d5877faab27ab8e9f9eaee40697461fc 230 Pfam PF00849 RNA pseudouridylate synthase 65 190 1.7E-12 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_000710 d5877faab27ab8e9f9eaee40697461fc 230 Pfam PF01479 S4 domain 6 39 4.7E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_000710 d5877faab27ab8e9f9eaee40697461fc 230 Gene3D G3DSA:3.30.70.1560 132 203 3.5E-27 T 14-10-2018 D172_000710 d5877faab27ab8e9f9eaee40697461fc 230 Gene3D G3DSA:3.30.70.580 57 131 3.8E-18 T 14-10-2018 D172_004750 3ed825c7df2ac09d9a8dfc3d2ac4519c 555 Pfam PF17200 Single Cache domain 2 77 189 9.0E-28 T 14-10-2018 IPR033480 Single Cache domain 2 D172_004750 3ed825c7df2ac09d9a8dfc3d2ac4519c 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 321 350 4.8E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_004750 3ed825c7df2ac09d9a8dfc3d2ac4519c 555 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 420 449 4.8E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_004750 3ed825c7df2ac09d9a8dfc3d2ac4519c 555 SMART SM00283 293 554 4.7E-67 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_004750 3ed825c7df2ac09d9a8dfc3d2ac4519c 555 SMART SM01049 45 131 1.4E-22 T 14-10-2018 IPR033480 Single Cache domain 2 D172_004750 3ed825c7df2ac09d9a8dfc3d2ac4519c 555 Gene3D G3DSA:3.30.450.20 29 204 8.7E-38 T 14-10-2018 D172_004750 3ed825c7df2ac09d9a8dfc3d2ac4519c 555 Pfam PF00672 HAMP domain 225 274 1.1E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_004750 3ed825c7df2ac09d9a8dfc3d2ac4519c 555 Gene3D G3DSA:1.10.287.950 223 555 1.5E-72 T 14-10-2018 D172_004750 3ed825c7df2ac09d9a8dfc3d2ac4519c 555 SMART SM00304 224 278 4.1E-15 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_004750 3ed825c7df2ac09d9a8dfc3d2ac4519c 555 SUPERFAMILY SSF58104 246 555 9.68E-76 T 14-10-2018 D172_004750 3ed825c7df2ac09d9a8dfc3d2ac4519c 555 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 365 521 6.0E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_013690 afd2d0098a619e913e451aacc30c434f 432 SMART SM01193 4 134 1.1E-88 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_013690 afd2d0098a619e913e451aacc30c434f 432 ProSitePatterns PS00164 Enolase signature. 340 353 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_013690 afd2d0098a619e913e451aacc30c434f 432 SMART SM01192 143 431 3.8E-211 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_013690 afd2d0098a619e913e451aacc30c434f 432 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 1.3E-135 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_013690 afd2d0098a619e913e451aacc30c434f 432 Hamap MF_00318 Enolase [eno]. 2 417 43.689 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_013690 afd2d0098a619e913e451aacc30c434f 432 PRINTS PR00148 Enolase signature 317 328 8.3E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_013690 afd2d0098a619e913e451aacc30c434f 432 PRINTS PR00148 Enolase signature 369 386 8.3E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_013690 afd2d0098a619e913e451aacc30c434f 432 PRINTS PR00148 Enolase signature 107 123 8.3E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_013690 afd2d0098a619e913e451aacc30c434f 432 PRINTS PR00148 Enolase signature 340 354 8.3E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_013690 afd2d0098a619e913e451aacc30c434f 432 PRINTS PR00148 Enolase signature 37 51 8.3E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_013690 afd2d0098a619e913e451aacc30c434f 432 PRINTS PR00148 Enolase signature 165 178 8.3E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_013690 afd2d0098a619e913e451aacc30c434f 432 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 1.9E-204 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_013690 afd2d0098a619e913e451aacc30c434f 432 PIRSF PIRSF001400 1 431 1.2E-189 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_013690 afd2d0098a619e913e451aacc30c434f 432 SUPERFAMILY SSF51604 144 429 7.34E-125 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily D172_013690 afd2d0098a619e913e451aacc30c434f 432 Pfam PF03952 Enolase, N-terminal domain 4 134 2.6E-57 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 D172_013690 afd2d0098a619e913e451aacc30c434f 432 Gene3D G3DSA:3.30.390.10 1 127 3.6E-54 T 14-10-2018 IPR029017 Enolase-like, N-terminal D172_013690 afd2d0098a619e913e451aacc30c434f 432 SUPERFAMILY SSF54826 3 138 1.97E-55 T 14-10-2018 D172_013690 afd2d0098a619e913e451aacc30c434f 432 Gene3D G3DSA:3.20.20.120 128 432 6.4E-130 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily D172_021020 039d013ced13638079bdb052bc5e0388 426 SUPERFAMILY SSF55681 5 323 2.19E-106 T 14-10-2018 D172_021020 039d013ced13638079bdb052bc5e0388 426 PIRSF PIRSF001549 2 424 4.1E-120 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 D172_021020 039d013ced13638079bdb052bc5e0388 426 Gene3D G3DSA:3.30.930.10 2 324 5.9E-117 T 14-10-2018 D172_021020 039d013ced13638079bdb052bc5e0388 426 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 408 1.1E-153 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 D172_021020 039d013ced13638079bdb052bc5e0388 426 SUPERFAMILY SSF52954 328 424 1.8E-21 T 14-10-2018 D172_021020 039d013ced13638079bdb052bc5e0388 426 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 425 33.111 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 D172_021020 039d013ced13638079bdb052bc5e0388 426 Pfam PF03129 Anticodon binding domain 346 422 1.6E-10 T 14-10-2018 IPR004154 Anticodon-binding D172_021020 039d013ced13638079bdb052bc5e0388 426 Pfam PF13393 Histidyl-tRNA synthetase 10 312 3.5E-46 T 14-10-2018 D172_021020 039d013ced13638079bdb052bc5e0388 426 Gene3D G3DSA:3.40.50.800 327 423 7.2E-23 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily D172_021040 0b847e6315d3a726363f8782966d6a63 376 Gene3D G3DSA:3.20.20.70 68 338 3.4E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_021040 0b847e6315d3a726363f8782966d6a63 376 SUPERFAMILY SSF102114 106 313 1.31E-13 T 14-10-2018 D172_021040 0b847e6315d3a726363f8782966d6a63 376 Gene3D G3DSA:1.10.150.530 1 67 2.7E-26 T 14-10-2018 D172_021040 0b847e6315d3a726363f8782966d6a63 376 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 6 353 72.797 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 D172_021040 0b847e6315d3a726363f8782966d6a63 376 PIRSF PIRSF006004 3 366 1.5E-144 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 D172_021040 0b847e6315d3a726363f8782966d6a63 376 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 2 357 2.1E-156 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 D172_021040 0b847e6315d3a726363f8782966d6a63 376 Pfam PF04055 Radical SAM superfamily 110 278 1.6E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D172_013175 03b19dbda01736b68c6ffb624fc5b4b9 159 SUPERFAMILY SSF74982 8 138 9.94E-48 T 14-10-2018 IPR023620 Small protein B D172_013175 03b19dbda01736b68c6ffb624fc5b4b9 159 Pfam PF01668 SmpB protein 14 157 1.8E-54 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 D172_013175 03b19dbda01736b68c6ffb624fc5b4b9 159 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 3.0E-59 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 D172_013175 03b19dbda01736b68c6ffb624fc5b4b9 159 Hamap MF_00023 SsrA-binding protein [smpB]. 1 159 68.024 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 D172_013175 03b19dbda01736b68c6ffb624fc5b4b9 159 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site D172_013175 03b19dbda01736b68c6ffb624fc5b4b9 159 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 3.5E-50 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 D172_013175 03b19dbda01736b68c6ffb624fc5b4b9 159 Gene3D G3DSA:2.40.280.10 6 135 3.7E-43 T 14-10-2018 IPR023620 Small protein B D172_000405 f4734d0e8861e48fb734c78a2b764800 175 Gene3D G3DSA:2.160.10.10 1 175 2.2E-57 T 14-10-2018 D172_000405 f4734d0e8861e48fb734c78a2b764800 175 SUPERFAMILY SSF51161 38 174 1.21E-45 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily D172_000405 f4734d0e8861e48fb734c78a2b764800 175 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D172_000405 f4734d0e8861e48fb734c78a2b764800 175 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 121 156 2.7E-11 T 14-10-2018 IPR001451 Hexapeptide repeat D172_000405 f4734d0e8861e48fb734c78a2b764800 175 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 62 100 0.0043 T 14-10-2018 IPR001451 Hexapeptide repeat D172_001715 485b599184eaf146050431b1c376592c 447 SMART SM00646 220 379 9.1E-63 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 D172_001715 485b599184eaf146050431b1c376592c 447 SMART SM00257 402 445 1.9E-15 T 14-10-2018 IPR018392 LysM domain D172_001715 485b599184eaf146050431b1c376592c 447 SUPERFAMILY SSF53187 158 382 2.76E-50 T 14-10-2018 D172_001715 485b599184eaf146050431b1c376592c 447 Pfam PF01476 LysM domain 403 445 1.1E-12 T 14-10-2018 IPR018392 LysM domain D172_001715 485b599184eaf146050431b1c376592c 447 SUPERFAMILY SSF54106 402 445 6.02E-10 T 14-10-2018 D172_001715 485b599184eaf146050431b1c376592c 447 Pfam PF11741 AMIN domain 30 130 4.5E-18 T 14-10-2018 IPR021731 AMIN domain D172_001715 485b599184eaf146050431b1c376592c 447 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 160 379 9.2E-47 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 D172_001715 485b599184eaf146050431b1c376592c 447 Gene3D G3DSA:3.40.630.40 145 387 1.2E-71 T 14-10-2018 D172_001715 485b599184eaf146050431b1c376592c 447 Gene3D G3DSA:3.10.350.10 399 447 8.4E-15 T 14-10-2018 IPR036779 LysM domain superfamily D172_001715 485b599184eaf146050431b1c376592c 447 Gene3D G3DSA:2.60.40.3500 18 133 1.3E-27 T 14-10-2018 D172_005475 af15b943e10b44fc7f615f0137d8503e 309 Pfam PF02401 LytB protein 3 282 9.4E-92 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 D172_005475 af15b943e10b44fc7f615f0137d8503e 309 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.487 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 D172_005475 af15b943e10b44fc7f615f0137d8503e 309 Gene3D G3DSA:3.40.1010.20 97 196 1.8E-111 T 14-10-2018 D172_005475 af15b943e10b44fc7f615f0137d8503e 309 Gene3D G3DSA:3.40.50.11270 12 96 1.8E-111 T 14-10-2018 D172_005475 af15b943e10b44fc7f615f0137d8503e 309 Gene3D G3DSA:3.40.1010.20 6 282 1.8E-111 T 14-10-2018 D172_005475 af15b943e10b44fc7f615f0137d8503e 309 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 4.2E-100 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 SMART SM01274 80 260 7.5E-105 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 Pfam PF03949 Malic enzyme, NAD binding domain 270 530 5.2E-99 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 SUPERFAMILY SSF51735 270 561 6.75E-94 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 3 564 68.548 T 14-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 Gene3D G3DSA:3.40.50.720 268 563 6.3E-104 T 14-10-2018 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 PRINTS PR00072 Malic enzyme signature 407 423 5.9E-74 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 PRINTS PR00072 Malic enzyme signature 86 110 5.9E-74 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 PRINTS PR00072 Malic enzyme signature 146 175 5.9E-74 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 PRINTS PR00072 Malic enzyme signature 182 204 5.9E-74 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 PRINTS PR00072 Malic enzyme signature 297 313 5.9E-74 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 PRINTS PR00072 Malic enzyme signature 241 259 5.9E-74 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 PRINTS PR00072 Malic enzyme signature 266 282 5.9E-74 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 SMART SM00919 270 530 4.4E-127 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 Gene3D G3DSA:3.40.50.10380 17 267 4.7E-115 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 Pfam PF00390 Malic enzyme, N-terminal domain 80 260 8.4E-78 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 ProSitePatterns PS00331 Malic enzymes signature. 266 282 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 SUPERFAMILY SSF53223 4 269 4.53E-110 T 14-10-2018 D172_008735 f99cf40bf24f4a76c5185b6f99f55d4f 564 PIRSF PIRSF000106 2 562 7.4E-227 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D172_021045 be8b111680a20a60ce9970f9c2559b39 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.637 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D172_021045 be8b111680a20a60ce9970f9c2559b39 143 SMART SM00562 3 140 1.5E-87 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D172_021045 be8b111680a20a60ce9970f9c2559b39 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 7.2E-40 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D172_021045 be8b111680a20a60ce9970f9c2559b39 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 7.2E-40 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D172_021045 be8b111680a20a60ce9970f9c2559b39 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 7.2E-40 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D172_021045 be8b111680a20a60ce9970f9c2559b39 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 7.2E-40 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D172_021045 be8b111680a20a60ce9970f9c2559b39 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 7.2E-40 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D172_021045 be8b111680a20a60ce9970f9c2559b39 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.9E-56 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D172_021045 be8b111680a20a60ce9970f9c2559b39 143 Gene3D G3DSA:3.30.70.141 1 143 3.3E-58 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D172_021045 be8b111680a20a60ce9970f9c2559b39 143 SUPERFAMILY SSF54919 1 141 4.45E-59 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 D172_021045 be8b111680a20a60ce9970f9c2559b39 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 5.8E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 299 317 5.8E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 5.8E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 381 403 5.8E-30 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 228 241 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 SUPERFAMILY SSF50621 257 414 8.16E-55 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 SUPERFAMILY SSF51419 26 283 1.1E-83 T 14-10-2018 IPR029066 PLP-binding barrel D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 30 371 8.2E-26 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 371 384 8.3E-28 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 8.3E-28 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 8.3E-28 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 8.3E-28 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 271 290 8.3E-28 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 Gene3D G3DSA:3.20.20.10 34 276 8.5E-153 T 14-10-2018 IPR029066 PLP-binding barrel D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 412 2.2E-164 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 Gene3D G3DSA:2.40.37.10 16 410 8.5E-153 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 414 41.837 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_000755 e1ce24974f6b54a1f4c7d90868d46497 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 281 2.8E-76 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 D172_011040 b94564653944737f0a23269b32b0286b 202 Gene3D G3DSA:1.10.8.420 1 52 1.6E-17 T 14-10-2018 D172_011040 b94564653944737f0a23269b32b0286b 202 Pfam PF13662 Toprim domain 82 172 1.3E-23 T 14-10-2018 IPR006171 TOPRIM domain D172_011040 b94564653944737f0a23269b32b0286b 202 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 97.026 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 D172_011040 b94564653944737f0a23269b32b0286b 202 SUPERFAMILY SSF111304 2 199 5.89E-70 T 14-10-2018 IPR023627 Recombination protein RecR D172_011040 b94564653944737f0a23269b32b0286b 202 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 1.1E-73 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 D172_011040 b94564653944737f0a23269b32b0286b 202 Pfam PF02132 RecR protein 41 77 9.5E-12 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger D172_011040 b94564653944737f0a23269b32b0286b 202 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 D172_011040 b94564653944737f0a23269b32b0286b 202 SMART SM00493 81 166 8.0E-16 T 14-10-2018 IPR006171 TOPRIM domain D172_011040 b94564653944737f0a23269b32b0286b 202 Gene3D G3DSA:3.40.1360.10 78 199 1.8E-40 T 14-10-2018 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 326 4.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 312 4.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 351 4.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 370 4.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 Gene3D G3DSA:3.40.50.2300 398 535 5.7E-30 T 14-10-2018 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 Gene3D G3DSA:1.10.287.130 139 212 2.3E-22 T 14-10-2018 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 259 369 6.5E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 Gene3D G3DSA:3.30.565.10 213 371 7.4E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 SMART SM00388 146 211 2.3E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 SUPERFAMILY SSF52172 8 139 4.7E-22 T 14-10-2018 IPR011006 CheY-like superfamily D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 Gene3D G3DSA:3.40.50.2300 538 655 3.5E-20 T 14-10-2018 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 SMART SM00387 258 373 5.0E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 SUPERFAMILY SSF55874 200 369 6.55E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 SUPERFAMILY SSF52172 543 654 6.12E-21 T 14-10-2018 IPR011006 CheY-like superfamily D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 Gene3D G3DSA:3.40.50.2300 5 138 1.1E-20 T 14-10-2018 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 SUPERFAMILY SSF52172 402 521 3.56E-29 T 14-10-2018 IPR011006 CheY-like superfamily D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 SMART SM00448 544 654 1.7E-12 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 SMART SM00448 6 121 2.0E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 SMART SM00448 401 517 4.3E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 SUPERFAMILY SSF47384 139 212 1.26E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 Pfam PF00072 Response regulator receiver domain 9 111 1.4E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 Pfam PF00072 Response regulator receiver domain 547 653 4.1E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 Pfam PF00072 Response regulator receiver domain 403 516 2.9E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004145 21e6e787b810b0282ee2063e0a88ec62 655 Pfam PF00512 His Kinase A (phospho-acceptor) domain 146 209 6.2E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_006930 6cd39e13734bb0d8c16ed0e58efcfe09 216 SUPERFAMILY SSF52833 42 202 7.5E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_006930 6cd39e13734bb0d8c16ed0e58efcfe09 216 Gene3D G3DSA:3.40.30.10 36 211 5.4E-40 T 14-10-2018 D172_006930 6cd39e13734bb0d8c16ed0e58efcfe09 216 Pfam PF00578 AhpC/TSA family 45 191 3.7E-35 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 SUPERFAMILY SSF141868 541 787 5.89E-79 T 14-10-2018 IPR035919 EAL domain superfamily D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 SUPERFAMILY SSF55781 5 170 9.6E-35 T 14-10-2018 D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 SMART SM00052 536 780 4.3E-99 T 14-10-2018 IPR001633 EAL domain D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 Gene3D G3DSA:3.30.70.270 360 539 1.4E-54 T 14-10-2018 D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 Gene3D G3DSA:3.20.20.450 540 787 2.9E-89 T 14-10-2018 IPR035919 EAL domain superfamily D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 SUPERFAMILY SSF55073 368 528 3.84E-43 T 14-10-2018 IPR029787 Nucleotide cyclase D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 Pfam PF13185 GAF domain 207 351 5.4E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 Pfam PF13185 GAF domain 33 168 3.0E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 359 525 1.9E-40 T 14-10-2018 IPR000160 GGDEF domain D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 521 1.3E-43 T 14-10-2018 IPR000160 GGDEF domain D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 SMART SM00065 33 180 7.6E-16 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 SMART SM00065 208 360 5.5E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 SUPERFAMILY SSF55781 171 352 3.05E-20 T 14-10-2018 D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 SMART SM00267 352 526 7.6E-57 T 14-10-2018 IPR000160 GGDEF domain D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 Pfam PF00563 EAL domain 542 775 3.7E-67 T 14-10-2018 IPR001633 EAL domain D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 Gene3D G3DSA:3.30.450.40 8 174 1.4E-31 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_011130 9ece2a741aa7853bbbdb0c874706de89 789 Gene3D G3DSA:3.30.450.40 194 359 7.6E-17 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_016570 15635914792d0096b338c85f15216e51 309 Pfam PF01040 UbiA prenyltransferase family 42 289 1.1E-54 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 D172_016570 15635914792d0096b338c85f15216e51 309 Gene3D G3DSA:1.10.357.140 31 191 1.0E-18 T 14-10-2018 D172_016570 15635914792d0096b338c85f15216e51 309 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 80 102 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site D172_016570 15635914792d0096b338c85f15216e51 309 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 28 305 1.7E-95 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 D172_016570 15635914792d0096b338c85f15216e51 309 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 25 306 18.926 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 D172_020455 675d05fa7bf512931e3395123c863b3d 130 Pfam PF10000 ACT domain 3 70 3.1E-24 T 14-10-2018 IPR018717 Domain of unknown function DUF2241 D172_020455 675d05fa7bf512931e3395123c863b3d 130 Gene3D G3DSA:3.30.2130.10 1 130 1.9E-46 T 14-10-2018 D172_020455 675d05fa7bf512931e3395123c863b3d 130 SUPERFAMILY SSF55021 3 67 9.61E-17 T 14-10-2018 D172_020455 675d05fa7bf512931e3395123c863b3d 130 SUPERFAMILY SSF55021 70 129 2.75E-19 T 14-10-2018 D172_012805 71884c1cb4d64746000ab153dec2bc0f 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.531 T 14-10-2018 IPR005215 Trigger factor GO:0015031 D172_012805 71884c1cb4d64746000ab153dec2bc0f 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 236 1.3E-13 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D172_012805 71884c1cb4d64746000ab153dec2bc0f 434 Gene3D G3DSA:1.10.3120.10 116 416 2.5E-103 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 D172_012805 71884c1cb4d64746000ab153dec2bc0f 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 4.2E-41 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 D172_012805 71884c1cb4d64746000ab153dec2bc0f 434 TIGRFAM TIGR00115 tig: trigger factor 11 412 1.1E-144 T 14-10-2018 IPR005215 Trigger factor GO:0015031 D172_012805 71884c1cb4d64746000ab153dec2bc0f 434 SUPERFAMILY SSF109998 248 429 1.96E-47 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily D172_012805 71884c1cb4d64746000ab153dec2bc0f 434 SUPERFAMILY SSF102735 1 130 3.01E-39 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 D172_012805 71884c1cb4d64746000ab153dec2bc0f 434 SUPERFAMILY SSF54534 90 241 2.16E-37 T 14-10-2018 D172_012805 71884c1cb4d64746000ab153dec2bc0f 434 Gene3D G3DSA:3.10.50.40 150 246 2.5E-103 T 14-10-2018 D172_012805 71884c1cb4d64746000ab153dec2bc0f 434 Gene3D G3DSA:3.30.70.1050 1 115 7.8E-41 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 D172_012805 71884c1cb4d64746000ab153dec2bc0f 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 1.1E-37 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 D172_012805 71884c1cb4d64746000ab153dec2bc0f 434 PIRSF PIRSF003095 1 434 3.4E-129 T 14-10-2018 IPR005215 Trigger factor GO:0015031 D172_017035 f4dc0e59afc175a3fb740322169cfaeb 178 PIRSF PIRSF011484 1 178 1.2E-70 T 14-10-2018 IPR009822 YaeQ D172_017035 f4dc0e59afc175a3fb740322169cfaeb 178 SMART SM01322 1 176 2.6E-113 T 14-10-2018 IPR009822 YaeQ D172_017035 f4dc0e59afc175a3fb740322169cfaeb 178 Gene3D G3DSA:3.10.640.10 1 178 1.7E-75 T 14-10-2018 IPR038590 YaeQ superfamily D172_017035 f4dc0e59afc175a3fb740322169cfaeb 178 Pfam PF07152 YaeQ protein 1 173 1.9E-74 T 14-10-2018 IPR009822 YaeQ D172_017035 f4dc0e59afc175a3fb740322169cfaeb 178 SUPERFAMILY SSF52980 2 177 1.29E-70 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 D172_000830 b12a3f9367261568446c0e759c4ec158 301 Pfam PF05661 Protein of unknown function (DUF808) 5 291 1.5E-111 T 14-10-2018 IPR008526 Inner membrane protein YedI D172_000830 b12a3f9367261568446c0e759c4ec158 301 PIRSF PIRSF016660 1 301 2.4E-116 T 14-10-2018 IPR008526 Inner membrane protein YedI D172_006065 90af5209c12b35d1df6a5055ee1524fb 257 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 6.5E-107 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 D172_006065 90af5209c12b35d1df6a5055ee1524fb 257 PIRSF PIRSF029037 1 257 3.7E-106 T 14-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 D172_003665 102c2e463102be0039fabfb2101485fb 241 SUPERFAMILY SSF53335 17 239 3.13E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_003665 102c2e463102be0039fabfb2101485fb 241 Gene3D G3DSA:3.40.50.150 32 241 1.2E-70 T 14-10-2018 D172_003665 102c2e463102be0039fabfb2101485fb 241 Pfam PF02390 Putative methyltransferase 66 235 7.3E-61 T 14-10-2018 D172_003665 102c2e463102be0039fabfb2101485fb 241 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 26 240 29.666 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 D172_003665 102c2e463102be0039fabfb2101485fb 241 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 55 240 1.5E-66 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 D172_017805 52b3adce1d6250ac95672ad38fcba53a 499 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 380 474 1.6E-20 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal D172_017805 52b3adce1d6250ac95672ad38fcba53a 499 SUPERFAMILY SSF47741 100 185 1.44E-27 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily D172_017805 52b3adce1d6250ac95672ad38fcba53a 499 Pfam PF01799 [2Fe-2S] binding domain 86 164 7.4E-26 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 D172_017805 52b3adce1d6250ac95672ad38fcba53a 499 PIRSF PIRSF036557 1 491 4.5E-156 T 14-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria D172_017805 52b3adce1d6250ac95672ad38fcba53a 499 SUPERFAMILY SSF55447 377 479 4.19E-23 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily D172_017805 52b3adce1d6250ac95672ad38fcba53a 499 SMART SM01092 377 478 1.7E-15 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal D172_017805 52b3adce1d6250ac95672ad38fcba53a 499 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 D172_017805 52b3adce1d6250ac95672ad38fcba53a 499 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 2 475 6.4E-155 T 14-10-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 D172_017805 52b3adce1d6250ac95672ad38fcba53a 499 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 206 369 1.3E-42 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 D172_017805 52b3adce1d6250ac95672ad38fcba53a 499 SUPERFAMILY SSF56176 191 368 3.92E-45 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D172_017805 52b3adce1d6250ac95672ad38fcba53a 499 Gene3D G3DSA:3.30.365.10 1 498 1.4E-124 T 14-10-2018 D172_017805 52b3adce1d6250ac95672ad38fcba53a 499 SUPERFAMILY SSF54292 2 89 2.36E-17 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D172_017805 52b3adce1d6250ac95672ad38fcba53a 499 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 72 4.8E-5 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 D172_014565 6b62dab2f95baa52866d69903197af26 1048 Gene3D G3DSA:3.30.2090.10 724 817 3.9E-281 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_014565 6b62dab2f95baa52866d69903197af26 1048 Gene3D G3DSA:3.30.70.1320 136 335 3.9E-281 T 14-10-2018 D172_014565 6b62dab2f95baa52866d69903197af26 1048 Gene3D G3DSA:3.30.2090.10 188 278 3.9E-281 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_014565 6b62dab2f95baa52866d69903197af26 1048 Pfam PF00873 AcrB/AcrD/AcrF family 5 1036 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_014565 6b62dab2f95baa52866d69903197af26 1048 Gene3D G3DSA:1.20.1640.10 12 515 3.9E-281 T 14-10-2018 D172_014565 6b62dab2f95baa52866d69903197af26 1048 SUPERFAMILY SSF82714 192 274 7.32E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_014565 6b62dab2f95baa52866d69903197af26 1048 Gene3D G3DSA:3.30.70.1440 670 875 3.9E-281 T 14-10-2018 D172_014565 6b62dab2f95baa52866d69903197af26 1048 Gene3D G3DSA:3.30.70.1430 42 825 3.9E-281 T 14-10-2018 D172_014565 6b62dab2f95baa52866d69903197af26 1048 Gene3D G3DSA:1.20.1640.10 516 1032 3.9E-281 T 14-10-2018 D172_014565 6b62dab2f95baa52866d69903197af26 1048 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.1E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_014565 6b62dab2f95baa52866d69903197af26 1048 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.1E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_014565 6b62dab2f95baa52866d69903197af26 1048 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 2.1E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_014565 6b62dab2f95baa52866d69903197af26 1048 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.1E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_014565 6b62dab2f95baa52866d69903197af26 1048 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 2.1E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_014565 6b62dab2f95baa52866d69903197af26 1048 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.1E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_014565 6b62dab2f95baa52866d69903197af26 1048 PRINTS PR00702 Acriflavin resistance protein family signature 455 478 2.1E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_014565 6b62dab2f95baa52866d69903197af26 1048 SUPERFAMILY SSF82866 300 507 2.62E-28 T 14-10-2018 D172_014565 6b62dab2f95baa52866d69903197af26 1048 SUPERFAMILY SSF82714 725 815 3.53E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_014565 6b62dab2f95baa52866d69903197af26 1048 Gene3D G3DSA:3.30.70.1430 568 669 3.9E-281 T 14-10-2018 D172_014565 6b62dab2f95baa52866d69903197af26 1048 SUPERFAMILY SSF82866 814 1041 1.44E-54 T 14-10-2018 D172_014565 6b62dab2f95baa52866d69903197af26 1048 SUPERFAMILY SSF82693 42 127 1.44E-22 T 14-10-2018 D172_014565 6b62dab2f95baa52866d69903197af26 1048 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1044 0.0 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 D172_014565 6b62dab2f95baa52866d69903197af26 1048 SUPERFAMILY SSF82693 569 667 5.23E-9 T 14-10-2018 D172_014565 6b62dab2f95baa52866d69903197af26 1048 SUPERFAMILY SSF82693 155 333 1.92E-16 T 14-10-2018 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 1.8E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 526 548 1.8E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 1.8E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 559 569 1.8E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 1.8E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 487 505 1.8E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 1.8E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 SUPERFAMILY SSF47323 665 861 1.61E-37 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 Pfam PF08264 Anticodon-binding domain of tRNA 702 823 3.3E-20 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 406 1.5E-76 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 SUPERFAMILY SSF52374 4 671 1.52E-144 T 14-10-2018 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 420 575 3.3E-8 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 1.1E-27 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 621 661 1.2E-7 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 Gene3D G3DSA:1.10.730.10 8 793 0.0 T 14-10-2018 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 Gene3D G3DSA:3.90.740.10 227 416 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 Gene3D G3DSA:3.10.330.110 569 631 0.0 T 14-10-2018 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 Gene3D G3DSA:3.40.50.620 33 568 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 Gene3D G3DSA:3.10.20.590 801 861 8.3E-24 T 14-10-2018 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 SUPERFAMILY SSF50677 226 417 9.21E-53 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 861 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D172_012140 2cd3fcba5ddc622fc5de35c5d91f43c9 862 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 861 23.511 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 D172_006955 7c5957c5d93e208fdc456c8a4d4c68dd 1011 Gene3D G3DSA:2.40.170.20 427 1011 5.7E-54 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_006955 7c5957c5d93e208fdc456c8a4d4c68dd 1011 Gene3D G3DSA:3.55.50.30 72 156 1.1E-13 T 14-10-2018 D172_006955 7c5957c5d93e208fdc456c8a4d4c68dd 1011 Pfam PF07715 TonB-dependent Receptor Plug Domain 204 325 6.7E-23 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_006955 7c5957c5d93e208fdc456c8a4d4c68dd 1011 Pfam PF00593 TonB dependent receptor 449 1010 1.0E-33 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_006955 7c5957c5d93e208fdc456c8a4d4c68dd 1011 Gene3D G3DSA:2.170.130.10 184 329 8.8E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_006955 7c5957c5d93e208fdc456c8a4d4c68dd 1011 SUPERFAMILY SSF56935 190 1011 1.79E-101 T 14-10-2018 D172_016070 12cdcbc18bf23dfc490e319dc9265ffc 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 1.2E-72 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 D172_016070 12cdcbc18bf23dfc490e319dc9265ffc 673 Gene3D G3DSA:1.10.486.10 377 545 1.5E-124 T 14-10-2018 D172_016070 12cdcbc18bf23dfc490e319dc9265ffc 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 668 0.0 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 D172_016070 12cdcbc18bf23dfc490e319dc9265ffc 673 SUPERFAMILY SSF52540 1 638 5.8E-161 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_016070 12cdcbc18bf23dfc490e319dc9265ffc 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 669 39.637 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 D172_016070 12cdcbc18bf23dfc490e319dc9265ffc 673 Gene3D G3DSA:3.40.50.300 274 633 1.5E-124 T 14-10-2018 D172_016070 12cdcbc18bf23dfc490e319dc9265ffc 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 8.5E-77 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 D172_016070 12cdcbc18bf23dfc490e319dc9265ffc 673 Gene3D G3DSA:3.40.50.300 4 266 1.0E-94 T 14-10-2018 D172_016070 12cdcbc18bf23dfc490e319dc9265ffc 673 Gene3D G3DSA:1.10.10.160 108 181 1.0E-94 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily D172_015350 e45b3a59820d6a4898db6328a0c515fe 469 Gene3D G3DSA:2.60.120.10 349 458 8.0E-19 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_015350 e45b3a59820d6a4898db6328a0c515fe 469 Gene3D G3DSA:3.90.550.10 1 348 6.2E-122 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_015350 e45b3a59820d6a4898db6328a0c515fe 469 SUPERFAMILY SSF53448 1 279 2.21E-73 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_015350 e45b3a59820d6a4898db6328a0c515fe 469 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 466 3.5E-231 T 14-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 D172_015350 e45b3a59820d6a4898db6328a0c515fe 469 Pfam PF01050 Mannose-6-phosphate isomerase 312 462 2.3E-74 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 D172_015350 e45b3a59820d6a4898db6328a0c515fe 469 SUPERFAMILY SSF51182 182 466 9.54E-91 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily D172_015350 e45b3a59820d6a4898db6328a0c515fe 469 Pfam PF00483 Nucleotidyl transferase 4 284 2.0E-70 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 D172_000360 f054ad97f0fbba6e64753f5625d730ef 469 SUPERFAMILY SSF46689 372 469 6.27E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_000360 f054ad97f0fbba6e64753f5625d730ef 469 SUPERFAMILY SSF52172 6 204 7.12E-31 T 14-10-2018 IPR011006 CheY-like superfamily D172_000360 f054ad97f0fbba6e64753f5625d730ef 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 372 381 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site D172_000360 f054ad97f0fbba6e64753f5625d730ef 469 Pfam PF00072 Response regulator receiver domain 7 126 1.5E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_000360 f054ad97f0fbba6e64753f5625d730ef 469 Gene3D G3DSA:1.10.10.60 424 468 2.4E-12 T 14-10-2018 D172_000360 f054ad97f0fbba6e64753f5625d730ef 469 Gene3D G3DSA:3.40.50.300 152 330 9.5E-62 T 14-10-2018 D172_000360 f054ad97f0fbba6e64753f5625d730ef 469 SMART SM00448 5 126 2.9E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_000360 f054ad97f0fbba6e64753f5625d730ef 469 SUPERFAMILY SSF52540 160 400 2.56E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_000360 f054ad97f0fbba6e64753f5625d730ef 469 SMART SM00382 180 323 1.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_000360 f054ad97f0fbba6e64753f5625d730ef 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 246 261 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D172_000360 f054ad97f0fbba6e64753f5625d730ef 469 Pfam PF02954 Bacterial regulatory protein, Fis family 427 467 2.1E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_000360 f054ad97f0fbba6e64753f5625d730ef 469 Gene3D G3DSA:3.40.50.2300 1 151 4.4E-25 T 14-10-2018 D172_000360 f054ad97f0fbba6e64753f5625d730ef 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 2.8E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_000360 f054ad97f0fbba6e64753f5625d730ef 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 469 2.8E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_000360 f054ad97f0fbba6e64753f5625d730ef 469 Pfam PF00158 Sigma-54 interaction domain 161 326 3.4E-64 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D172_000360 f054ad97f0fbba6e64753f5625d730ef 469 Gene3D G3DSA:1.10.8.60 331 396 5.8E-23 T 14-10-2018 D172_020255 2a5ddbe152a73b19edc54fba9267d63a 258 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 5 256 6.5E-48 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 D172_020255 2a5ddbe152a73b19edc54fba9267d63a 258 Gene3D G3DSA:3.40.830.10 1 258 3.3E-86 T 14-10-2018 D172_020255 2a5ddbe152a73b19edc54fba9267d63a 258 PIRSF PIRSF006157 1 258 2.6E-82 T 14-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 D172_020255 2a5ddbe152a73b19edc54fba9267d63a 258 SUPERFAMILY SSF53213 3 257 5.62E-82 T 14-10-2018 D172_010145 3202273fd7334a3563f6f1791e2740ed 200 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 9 191 6.0E-45 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_010145 3202273fd7334a3563f6f1791e2740ed 200 PRINTS PR00097 Anthranilate synthase component II signature 9 23 3.4E-31 T 14-10-2018 D172_010145 3202273fd7334a3563f6f1791e2740ed 200 PRINTS PR00097 Anthranilate synthase component II signature 58 67 3.4E-31 T 14-10-2018 D172_010145 3202273fd7334a3563f6f1791e2740ed 200 PRINTS PR00097 Anthranilate synthase component II signature 110 118 3.4E-31 T 14-10-2018 D172_010145 3202273fd7334a3563f6f1791e2740ed 200 PRINTS PR00097 Anthranilate synthase component II signature 172 185 3.4E-31 T 14-10-2018 D172_010145 3202273fd7334a3563f6f1791e2740ed 200 PRINTS PR00097 Anthranilate synthase component II signature 85 96 3.4E-31 T 14-10-2018 D172_010145 3202273fd7334a3563f6f1791e2740ed 200 PRINTS PR00097 Anthranilate synthase component II signature 130 142 3.4E-31 T 14-10-2018 D172_010145 3202273fd7334a3563f6f1791e2740ed 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 58 67 1.9E-13 T 14-10-2018 D172_010145 3202273fd7334a3563f6f1791e2740ed 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 85 96 1.9E-13 T 14-10-2018 D172_010145 3202273fd7334a3563f6f1791e2740ed 200 PRINTS PR00096 Glutamine amidotransferase superfamily signature 172 185 1.9E-13 T 14-10-2018 D172_010145 3202273fd7334a3563f6f1791e2740ed 200 SUPERFAMILY SSF52317 8 194 5.35E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_010145 3202273fd7334a3563f6f1791e2740ed 200 Pfam PF00117 Glutamine amidotransferase class-I 12 192 8.9E-40 T 14-10-2018 IPR017926 Glutamine amidotransferase D172_010145 3202273fd7334a3563f6f1791e2740ed 200 Gene3D G3DSA:3.40.50.880 7 196 7.5E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_004160 c32c6c3a3b24d7d011c0c60a3e40e2eb 143 SUPERFAMILY SSF54637 11 139 4.94E-35 T 14-10-2018 IPR029069 HotDog domain superfamily D172_004160 c32c6c3a3b24d7d011c0c60a3e40e2eb 143 Gene3D G3DSA:3.10.129.10 1 138 4.5E-40 T 14-10-2018 D172_004160 c32c6c3a3b24d7d011c0c60a3e40e2eb 143 Pfam PF13279 Thioesterase-like superfamily 16 135 5.1E-25 T 14-10-2018 D172_000675 6450ee4e0373ebc1df464207f4dabd5a 282 Pfam PF00753 Metallo-beta-lactamase superfamily 80 201 2.9E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_000675 6450ee4e0373ebc1df464207f4dabd5a 282 Gene3D G3DSA:3.60.15.10 25 239 2.4E-38 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_000675 6450ee4e0373ebc1df464207f4dabd5a 282 SMART SM00849 42 215 1.5E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_000675 6450ee4e0373ebc1df464207f4dabd5a 282 SUPERFAMILY SSF56281 16 255 2.24E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_000675 6450ee4e0373ebc1df464207f4dabd5a 282 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 83 102 - T 14-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 D172_012920 e66192aeff4ac88e37e63c0965edf8da 436 Pfam PF02803 Thiolase, C-terminal domain 296 434 7.3E-36 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 D172_012920 e66192aeff4ac88e37e63c0965edf8da 436 SUPERFAMILY SSF53901 298 434 7.33E-32 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_012920 e66192aeff4ac88e37e63c0965edf8da 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 8 435 2.1E-247 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 D172_012920 e66192aeff4ac88e37e63c0965edf8da 436 SUPERFAMILY SSF53901 15 294 1.53E-64 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_012920 e66192aeff4ac88e37e63c0965edf8da 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 4.4E-65 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 D172_012920 e66192aeff4ac88e37e63c0965edf8da 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 D172_012920 e66192aeff4ac88e37e63c0965edf8da 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 D172_012920 e66192aeff4ac88e37e63c0965edf8da 436 PIRSF PIRSF000429 9 436 1.2E-122 T 14-10-2018 IPR002155 Thiolase GO:0016747 D172_012920 e66192aeff4ac88e37e63c0965edf8da 436 Gene3D G3DSA:3.40.47.10 7 435 1.6E-115 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_012920 e66192aeff4ac88e37e63c0965edf8da 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 6.5E-131 T 14-10-2018 IPR002155 Thiolase GO:0016747 D172_012920 e66192aeff4ac88e37e63c0965edf8da 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 66.609 T 14-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 D172_012920 e66192aeff4ac88e37e63c0965edf8da 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 D172_020610 de29ed6ad21978dc02a73bb9c47e7b98 228 Gene3D G3DSA:3.90.470.20 106 210 1.8E-7 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D172_020610 de29ed6ad21978dc02a73bb9c47e7b98 228 SUPERFAMILY SSF56214 110 223 2.09E-13 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D172_020610 de29ed6ad21978dc02a73bb9c47e7b98 228 PRINTS PR01399 Enterobactin synthetase component D signature 155 171 2.6E-17 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 D172_020610 de29ed6ad21978dc02a73bb9c47e7b98 228 PRINTS PR01399 Enterobactin synthetase component D signature 48 68 2.6E-17 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 D172_020610 de29ed6ad21978dc02a73bb9c47e7b98 228 PRINTS PR01399 Enterobactin synthetase component D signature 78 96 2.6E-17 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 D172_020610 de29ed6ad21978dc02a73bb9c47e7b98 228 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 112 195 2.7E-11 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D172_018855 88dabd421efd7bb9d286cc3b2db85beb 251 Gene3D G3DSA:3.40.50.1580 1 251 6.2E-74 T 14-10-2018 D172_018855 88dabd421efd7bb9d286cc3b2db85beb 251 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 4 250 4.7E-98 T 14-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 D172_018855 88dabd421efd7bb9d286cc3b2db85beb 251 SUPERFAMILY SSF53167 4 233 1.57E-68 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 D172_018855 88dabd421efd7bb9d286cc3b2db85beb 251 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 D172_018855 88dabd421efd7bb9d286cc3b2db85beb 251 Pfam PF01048 Phosphorylase superfamily 18 246 9.4E-40 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 D172_019835 dfa54ef0e7d738157af19281a1961258 429 Pfam PF00245 Alkaline phosphatase 24 423 1.0E-98 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_019835 dfa54ef0e7d738157af19281a1961258 429 SUPERFAMILY SSF53649 12 426 2.62E-112 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D172_019835 dfa54ef0e7d738157af19281a1961258 429 PRINTS PR00113 Alkaline phosphatase signature 114 134 2.0E-30 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_019835 dfa54ef0e7d738157af19281a1961258 429 PRINTS PR00113 Alkaline phosphatase signature 23 43 2.0E-30 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_019835 dfa54ef0e7d738157af19281a1961258 429 PRINTS PR00113 Alkaline phosphatase signature 229 258 2.0E-30 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_019835 dfa54ef0e7d738157af19281a1961258 429 PRINTS PR00113 Alkaline phosphatase signature 164 174 2.0E-30 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_019835 dfa54ef0e7d738157af19281a1961258 429 PRINTS PR00113 Alkaline phosphatase signature 77 92 2.0E-30 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_019835 dfa54ef0e7d738157af19281a1961258 429 Gene3D G3DSA:1.10.60.40 305 389 3.2E-138 T 14-10-2018 D172_019835 dfa54ef0e7d738157af19281a1961258 429 ProSitePatterns PS00123 Alkaline phosphatase active site. 77 85 - T 14-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_019835 dfa54ef0e7d738157af19281a1961258 429 Gene3D G3DSA:3.40.720.10 27 420 3.2E-138 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D172_019835 dfa54ef0e7d738157af19281a1961258 429 SMART SM00098 24 425 8.2E-96 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 Gene3D G3DSA:3.30.70.1320 135 330 3.8E-269 T 14-10-2018 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 SUPERFAMILY SSF82866 294 498 1.57E-40 T 14-10-2018 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 SUPERFAMILY SSF82693 46 127 1.07E-19 T 14-10-2018 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 Pfam PF00873 AcrB/AcrD/AcrF family 6 1032 2.0E-234 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 SUPERFAMILY SSF82714 716 799 1.57E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_001925 846878f1813549b4f50fcbee76804cd4 1039 Gene3D G3DSA:3.30.2090.10 181 272 3.8E-269 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_001925 846878f1813549b4f50fcbee76804cd4 1039 Gene3D G3DSA:3.30.2090.10 714 802 3.8E-269 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_001925 846878f1813549b4f50fcbee76804cd4 1039 Gene3D G3DSA:3.30.70.1430 560 662 3.8E-269 T 14-10-2018 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 Gene3D G3DSA:3.30.70.1440 663 860 3.8E-269 T 14-10-2018 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 SUPERFAMILY SSF82693 137 328 8.37E-22 T 14-10-2018 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 Gene3D G3DSA:1.20.1640.10 13 508 3.8E-269 T 14-10-2018 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1035 0.0 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 3.1E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 3.1E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 3.1E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 3.1E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 3.1E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.1E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 3.1E-33 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 SUPERFAMILY SSF82866 800 1035 2.09E-44 T 14-10-2018 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 Gene3D G3DSA:3.30.70.1430 42 810 3.8E-269 T 14-10-2018 D172_001925 846878f1813549b4f50fcbee76804cd4 1039 SUPERFAMILY SSF82714 185 269 9.94E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_001925 846878f1813549b4f50fcbee76804cd4 1039 Gene3D G3DSA:1.20.1640.10 509 1030 3.8E-269 T 14-10-2018 D172_008425 37eafd3466d8c4d4d60778a7341087a6 325 SUPERFAMILY SSF52518 1 205 1.28E-69 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_008425 37eafd3466d8c4d4d60778a7341087a6 325 SUPERFAMILY SSF52922 189 324 4.32E-40 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D172_008425 37eafd3466d8c4d4d60778a7341087a6 325 Pfam PF02780 Transketolase, C-terminal domain 195 314 1.4E-36 T 14-10-2018 IPR033248 Transketolase, C-terminal domain D172_008425 37eafd3466d8c4d4d60778a7341087a6 325 Gene3D G3DSA:3.40.50.970 1 193 8.5E-88 T 14-10-2018 D172_008425 37eafd3466d8c4d4d60778a7341087a6 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 179 3.1E-48 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D172_008425 37eafd3466d8c4d4d60778a7341087a6 325 Gene3D G3DSA:3.40.50.920 194 325 1.6E-51 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D172_008425 37eafd3466d8c4d4d60778a7341087a6 325 SMART SM00861 4 180 1.3E-65 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D172_014510 ab8b8b3756852f9745587d75eacd656e 880 Pfam PF10101 Predicted membrane protein (DUF2339) 124 874 1.5E-122 T 14-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane D172_014510 ab8b8b3756852f9745587d75eacd656e 880 PIRSF PIRSF035905 1 880 6.4E-112 T 14-10-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein D172_017785 c26808e2d091eedae6b8b3468a69374b 116 PRINTS PR00189 Transthyretin signature 41 66 5.5E-12 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 D172_017785 c26808e2d091eedae6b8b3468a69374b 116 PRINTS PR00189 Transthyretin signature 94 116 5.5E-12 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 D172_017785 c26808e2d091eedae6b8b3468a69374b 116 PRINTS PR00189 Transthyretin signature 9 29 5.5E-12 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 D172_017785 c26808e2d091eedae6b8b3468a69374b 116 Pfam PF00576 HIUase/Transthyretin family 10 115 3.8E-38 T 14-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 D172_017785 c26808e2d091eedae6b8b3468a69374b 116 SMART SM00095 5 115 1.3E-9 T 14-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 D172_017785 c26808e2d091eedae6b8b3468a69374b 116 SUPERFAMILY SSF49472 2 116 1.57E-41 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 D172_017785 c26808e2d091eedae6b8b3468a69374b 116 ProSitePatterns PS00768 Transthyretin signature 1. 13 28 - T 14-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 D172_017785 c26808e2d091eedae6b8b3468a69374b 116 Gene3D G3DSA:2.60.40.180 1 115 3.9E-42 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 D172_017785 c26808e2d091eedae6b8b3468a69374b 116 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 8 116 2.0E-40 T 14-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 D172_017520 e82e800995937bbd8f114906722cf842 418 SUPERFAMILY SSF49879 26 107 1.68E-20 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 D172_017520 e82e800995937bbd8f114906722cf842 418 Pfam PF00498 FHA domain 28 96 4.2E-15 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 D172_017520 e82e800995937bbd8f114906722cf842 418 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 3 414 1.6E-91 T 14-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein D172_017520 e82e800995937bbd8f114906722cf842 418 Gene3D G3DSA:2.60.200.20 4 108 5.3E-19 T 14-10-2018 D172_017520 e82e800995937bbd8f114906722cf842 418 SMART SM00240 26 77 8.4E-9 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 D172_008245 e3bb51dea4ab4e69ed370e5b3f0d61dd 336 PIRSF PIRSF000164 12 336 3.5E-101 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 D172_008245 e3bb51dea4ab4e69ed370e5b3f0d61dd 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 D172_008245 e3bb51dea4ab4e69ed370e5b3f0d61dd 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 49.67 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 D172_008245 e3bb51dea4ab4e69ed370e5b3f0d61dd 336 Gene3D G3DSA:3.20.20.70 1 335 3.1E-137 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_008245 e3bb51dea4ab4e69ed370e5b3f0d61dd 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 5.9E-92 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 D172_008245 e3bb51dea4ab4e69ed370e5b3f0d61dd 336 SUPERFAMILY SSF51395 1 336 8.79E-103 T 14-10-2018 D172_008245 e3bb51dea4ab4e69ed370e5b3f0d61dd 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 D172_008245 e3bb51dea4ab4e69ed370e5b3f0d61dd 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 335 2.0E-138 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 D172_002295 08625b46a87720aede6d71aa54dc23e4 76 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 61 16.799 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 D172_002295 08625b46a87720aede6d71aa54dc23e4 76 Pfam PF03884 DNA gyrase inhibitor YacG 5 53 3.8E-23 T 14-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 D172_002295 08625b46a87720aede6d71aa54dc23e4 76 SUPERFAMILY SSF57716 2 48 1.25E-17 T 14-10-2018 D172_002295 08625b46a87720aede6d71aa54dc23e4 76 Gene3D G3DSA:3.30.50.10 2 64 1.1E-21 T 14-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 D172_012885 cb0f0c561a02a489f06c32d4e99c6dfe 421 SUPERFAMILY SSF53623 11 282 8.24E-79 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D172_012885 cb0f0c561a02a489f06c32d4e99c6dfe 421 Pfam PF08245 Mur ligase middle domain 53 232 1.5E-10 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D172_012885 cb0f0c561a02a489f06c32d4e99c6dfe 421 Gene3D G3DSA:3.40.1190.10 1 284 1.7E-79 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D172_012885 cb0f0c561a02a489f06c32d4e99c6dfe 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 418 5.7E-94 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 D172_012885 cb0f0c561a02a489f06c32d4e99c6dfe 421 SUPERFAMILY SSF53244 285 420 1.25E-24 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D172_012885 cb0f0c561a02a489f06c32d4e99c6dfe 421 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 143 158 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 D172_012885 cb0f0c561a02a489f06c32d4e99c6dfe 421 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 51 74 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 D172_012885 cb0f0c561a02a489f06c32d4e99c6dfe 421 Gene3D G3DSA:3.90.190.20 286 419 4.8E-26 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D172_012885 cb0f0c561a02a489f06c32d4e99c6dfe 421 PIRSF PIRSF001563 5 421 4.3E-104 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 D172_002550 0b309ffe558d88e147f6118a38222544 129 SUPERFAMILY SSF110069 9 129 1.1E-46 T 14-10-2018 IPR036767 ApaG domain superfamily D172_002550 0b309ffe558d88e147f6118a38222544 129 Gene3D G3DSA:2.60.40.1470 3 129 1.2E-43 T 14-10-2018 IPR036767 ApaG domain superfamily D172_002550 0b309ffe558d88e147f6118a38222544 129 Hamap MF_00791 Protein ApaG [apaG]. 4 129 31.441 T 14-10-2018 IPR023065 Uncharacterised protein family ApaG D172_002550 0b309ffe558d88e147f6118a38222544 129 Pfam PF04379 ApaG domain 23 106 7.6E-32 T 14-10-2018 IPR007474 ApaG domain D172_019915 005945f9ceaafb67ae254acb2c63bb51 170 SUPERFAMILY SSF75217 3 146 1.62E-29 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases D172_019915 005945f9ceaafb67ae254acb2c63bb51 170 Pfam PF00588 SpoU rRNA Methylase family 7 139 2.6E-20 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 D172_019915 005945f9ceaafb67ae254acb2c63bb51 170 Gene3D G3DSA:3.40.1280.10 7 146 1.3E-21 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D172_013570 d7e7fd1e80f235926b88dd46815443c9 143 SUPERFAMILY SSF140566 5 115 4.32E-16 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 D172_013570 d7e7fd1e80f235926b88dd46815443c9 143 Gene3D G3DSA:1.20.58.300 3 81 4.5E-5 T 14-10-2018 D172_013570 d7e7fd1e80f235926b88dd46815443c9 143 Pfam PF05130 FlgN protein 8 130 8.1E-17 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 D172_019650 0bda710fb61e17cfbcaf920d10727535 162 Pfam PF16036 Chalcone isomerase-like 33 161 4.5E-14 T 14-10-2018 IPR016087 Chalcone isomerase GO:0016872 D172_000070 2d1d1c7b108570c6219a0740ca3acc99 317 SUPERFAMILY SSF50486 208 307 5.18E-34 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 D172_000070 2d1d1c7b108570c6219a0740ca3acc99 317 Gene3D G3DSA:3.10.25.10 210 312 7.7E-37 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D172_000070 2d1d1c7b108570c6219a0740ca3acc99 317 Pfam PF02911 Formyl transferase, C-terminal domain 207 302 1.1E-32 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D172_000070 2d1d1c7b108570c6219a0740ca3acc99 317 SUPERFAMILY SSF53328 5 210 2.62E-69 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D172_000070 2d1d1c7b108570c6219a0740ca3acc99 317 Gene3D G3DSA:3.40.50.170 1 209 9.5E-87 T 14-10-2018 D172_000070 2d1d1c7b108570c6219a0740ca3acc99 317 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 305 37.989 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 D172_000070 2d1d1c7b108570c6219a0740ca3acc99 317 Pfam PF00551 Formyl transferase 6 184 3.4E-51 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D172_000070 2d1d1c7b108570c6219a0740ca3acc99 317 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D172_000070 2d1d1c7b108570c6219a0740ca3acc99 317 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 307 1.6E-108 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 D172_012950 b821592404dd809729bd3a1e4e0182c9 552 Pfam PF13584 Oxygen tolerance 13 459 3.1E-103 T 14-10-2018 IPR025738 Aerotolerance-related protein BatD D172_018065 5cb10eeb6180632d6c09d76aea0d5c63 297 SMART SM00342 214 296 5.7E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_018065 5cb10eeb6180632d6c09d76aea0d5c63 297 Pfam PF06719 AraC-type transcriptional regulator N-terminus 29 184 5.6E-30 T 14-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal D172_018065 5cb10eeb6180632d6c09d76aea0d5c63 297 Gene3D G3DSA:1.10.10.60 192 297 1.5E-27 T 14-10-2018 D172_018065 5cb10eeb6180632d6c09d76aea0d5c63 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 251 292 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D172_018065 5cb10eeb6180632d6c09d76aea0d5c63 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 296 2.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D172_018065 5cb10eeb6180632d6c09d76aea0d5c63 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 280 2.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D172_018065 5cb10eeb6180632d6c09d76aea0d5c63 297 Pfam PF12833 Helix-turn-helix domain 220 296 2.1E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_018065 5cb10eeb6180632d6c09d76aea0d5c63 297 SUPERFAMILY SSF46689 250 296 2.64E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_018065 5cb10eeb6180632d6c09d76aea0d5c63 297 SUPERFAMILY SSF46689 200 248 2.72E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 Gene3D G3DSA:3.30.70.1430 40 797 0.0 T 14-10-2018 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 SUPERFAMILY SSF82693 40 134 4.71E-26 T 14-10-2018 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_013880 1ff2f7218eef35fa10c808878a812640 1032 Pfam PF00873 AcrB/AcrD/AcrF family 4 1006 1.0E-291 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 SUPERFAMILY SSF82866 291 489 2.88E-49 T 14-10-2018 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.7E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.7E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.7E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.7E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.7E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.7E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 PRINTS PR00702 Acriflavin resistance protein family signature 607 621 1.7E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.7E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 1.7E-77 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 SUPERFAMILY SSF82714 182 265 4.71E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_013880 1ff2f7218eef35fa10c808878a812640 1032 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 14-10-2018 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 SUPERFAMILY SSF82693 136 324 4.88E-22 T 14-10-2018 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 SUPERFAMILY SSF82714 702 785 1.44E-18 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_013880 1ff2f7218eef35fa10c808878a812640 1032 SUPERFAMILY SSF82866 789 1009 5.36E-46 T 14-10-2018 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 Gene3D G3DSA:3.30.2090.10 701 789 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_013880 1ff2f7218eef35fa10c808878a812640 1032 SUPERFAMILY SSF82693 554 654 5.23E-16 T 14-10-2018 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 Gene3D G3DSA:1.20.1640.10 502 1003 0.0 T 14-10-2018 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 14-10-2018 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 Gene3D G3DSA:3.30.70.1430 556 651 0.0 T 14-10-2018 D172_013880 1ff2f7218eef35fa10c808878a812640 1032 Gene3D G3DSA:3.30.70.1440 652 846 0.0 T 14-10-2018 D172_004280 5e1ef05d7a35460617c50bae7c91fec5 229 SUPERFAMILY SSF46894 135 227 3.4E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_004280 5e1ef05d7a35460617c50bae7c91fec5 229 Gene3D G3DSA:1.10.10.10 139 229 2.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_004280 5e1ef05d7a35460617c50bae7c91fec5 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 225 2.0E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_004280 5e1ef05d7a35460617c50bae7c91fec5 229 Gene3D G3DSA:3.40.50.2300 1 124 1.8E-26 T 14-10-2018 D172_004280 5e1ef05d7a35460617c50bae7c91fec5 229 SUPERFAMILY SSF52172 1 129 1.71E-29 T 14-10-2018 IPR011006 CheY-like superfamily D172_004280 5e1ef05d7a35460617c50bae7c91fec5 229 SMART SM00448 2 115 6.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004280 5e1ef05d7a35460617c50bae7c91fec5 229 Pfam PF00072 Response regulator receiver domain 4 115 9.8E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004280 5e1ef05d7a35460617c50bae7c91fec5 229 SMART SM00862 153 226 2.6E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_004280 5e1ef05d7a35460617c50bae7c91fec5 229 TIGRFAM TIGR03787 marine_sort_RR: proteobacterial dedicated sortase system response regulator 2 228 9.0E-126 T 14-10-2018 IPR022305 Sortase system response regulator D172_017880 704032feb8875089ec651d2fcf2b26cf 318 Pfam PF01548 Transposase 11 151 2.0E-18 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D172_017880 704032feb8875089ec651d2fcf2b26cf 318 Pfam PF02371 Transposase IS116/IS110/IS902 family 194 277 3.8E-22 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D172_013575 a0834699046d3314753f8f70233a6c67 152 Pfam PF02169 LPP20 lipoprotein 54 128 2.7E-8 T 14-10-2018 IPR024952 Lipoprotein LPP20-like D172_013575 a0834699046d3314753f8f70233a6c67 152 PIRSF PIRSF028687 1 152 1.0E-42 T 14-10-2018 IPR007293 Flagellar protein FlgP D172_011175 4790b449c0625d48037072cec7ed31b5 219 Pfam PF00302 Chloramphenicol acetyltransferase 9 210 2.6E-29 T 14-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 D172_011175 4790b449c0625d48037072cec7ed31b5 219 SMART SM01059 8 210 6.2E-74 T 14-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 D172_011175 4790b449c0625d48037072cec7ed31b5 219 SUPERFAMILY SSF52777 9 215 3.37E-42 T 14-10-2018 D172_011175 4790b449c0625d48037072cec7ed31b5 219 Gene3D G3DSA:3.30.559.10 5 212 2.2E-60 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D172_011175 4790b449c0625d48037072cec7ed31b5 219 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 16 210 9.0E-87 T 14-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 D172_016960 6fc570e2c13c1c896161a2aade35bdb3 617 Gene3D G3DSA:3.30.70.270 435 612 1.7E-59 T 14-10-2018 D172_016960 6fc570e2c13c1c896161a2aade35bdb3 617 Pfam PF07696 7TMR-DISM extracellular 2 56 167 3.3E-18 T 14-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 D172_016960 6fc570e2c13c1c896161a2aade35bdb3 617 SUPERFAMILY SSF55073 455 612 3.84E-48 T 14-10-2018 IPR029787 Nucleotide cyclase D172_016960 6fc570e2c13c1c896161a2aade35bdb3 617 Pfam PF00990 Diguanylate cyclase, GGDEF domain 453 609 4.1E-46 T 14-10-2018 IPR000160 GGDEF domain D172_016960 6fc570e2c13c1c896161a2aade35bdb3 617 Gene3D G3DSA:2.60.40.2380 44 174 5.7E-16 T 14-10-2018 D172_016960 6fc570e2c13c1c896161a2aade35bdb3 617 SMART SM00267 439 613 9.4E-60 T 14-10-2018 IPR000160 GGDEF domain D172_016960 6fc570e2c13c1c896161a2aade35bdb3 617 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 446 610 3.1E-50 T 14-10-2018 IPR000160 GGDEF domain D172_016065 b8e81114e32ba958e10386cabecb82ac 856 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 436 599 8.9E-43 T 14-10-2018 IPR000160 GGDEF domain D172_016065 b8e81114e32ba958e10386cabecb82ac 856 SUPERFAMILY SSF55781 18 190 1.46E-18 T 14-10-2018 D172_016065 b8e81114e32ba958e10386cabecb82ac 856 SUPERFAMILY SSF55781 227 407 2.62E-16 T 14-10-2018 D172_016065 b8e81114e32ba958e10386cabecb82ac 856 SMART SM00065 244 396 0.0068 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_016065 b8e81114e32ba958e10386cabecb82ac 856 SMART SM00065 47 198 5.2E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_016065 b8e81114e32ba958e10386cabecb82ac 856 Pfam PF13185 GAF domain 51 189 7.6E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_016065 b8e81114e32ba958e10386cabecb82ac 856 Gene3D G3DSA:3.30.450.40 213 407 4.3E-17 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_016065 b8e81114e32ba958e10386cabecb82ac 856 Pfam PF00990 Diguanylate cyclase, GGDEF domain 438 596 9.9E-53 T 14-10-2018 IPR000160 GGDEF domain D172_016065 b8e81114e32ba958e10386cabecb82ac 856 SMART SM00052 596 838 0.0023 T 14-10-2018 IPR001633 EAL domain D172_016065 b8e81114e32ba958e10386cabecb82ac 856 SMART SM00267 427 600 1.1E-66 T 14-10-2018 IPR000160 GGDEF domain D172_016065 b8e81114e32ba958e10386cabecb82ac 856 SUPERFAMILY SSF55073 443 601 7.46E-49 T 14-10-2018 IPR029787 Nucleotide cyclase D172_016065 b8e81114e32ba958e10386cabecb82ac 856 Gene3D G3DSA:3.20.20.450 626 836 7.1E-9 T 14-10-2018 IPR035919 EAL domain superfamily D172_016065 b8e81114e32ba958e10386cabecb82ac 856 SUPERFAMILY SSF141868 649 815 4.97E-10 T 14-10-2018 IPR035919 EAL domain superfamily D172_016065 b8e81114e32ba958e10386cabecb82ac 856 Gene3D G3DSA:3.30.70.270 432 615 6.6E-60 T 14-10-2018 D172_016065 b8e81114e32ba958e10386cabecb82ac 856 Pfam PF00563 EAL domain 669 815 1.8E-10 T 14-10-2018 IPR001633 EAL domain D172_016065 b8e81114e32ba958e10386cabecb82ac 856 Gene3D G3DSA:3.30.450.40 23 192 8.5E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_016600 c8076550e5ad45ef3b653784ac228b78 530 Gene3D G3DSA:1.20.210.10 11 530 7.1E-216 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016600 c8076550e5ad45ef3b653784ac228b78 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 252 273 1.1E-120 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016600 c8076550e5ad45ef3b653784ac228b78 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 322 343 1.1E-120 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016600 c8076550e5ad45ef3b653784ac228b78 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 172 190 1.1E-120 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016600 c8076550e5ad45ef3b653784ac228b78 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 298 313 1.1E-120 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016600 c8076550e5ad45ef3b653784ac228b78 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 25 50 1.1E-120 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016600 c8076550e5ad45ef3b653784ac228b78 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 99 123 1.1E-120 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016600 c8076550e5ad45ef3b653784ac228b78 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 201 220 1.1E-120 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016600 c8076550e5ad45ef3b653784ac228b78 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 142 154 1.1E-120 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016600 c8076550e5ad45ef3b653784ac228b78 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 404 1.1E-120 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016600 c8076550e5ad45ef3b653784ac228b78 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 72 95 1.1E-120 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016600 c8076550e5ad45ef3b653784ac228b78 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 357 375 1.1E-120 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016600 c8076550e5ad45ef3b653784ac228b78 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 435 456 1.1E-120 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016600 c8076550e5ad45ef3b653784ac228b78 530 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 254 308 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016600 c8076550e5ad45ef3b653784ac228b78 530 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 35 476 2.6E-148 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016600 c8076550e5ad45ef3b653784ac228b78 530 SUPERFAMILY SSF81442 22 529 1.44E-190 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016600 c8076550e5ad45ef3b653784ac228b78 530 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 26 528 8.3E-213 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 D172_002920 a84a0dc22413aeb2c8f94c47c5647c84 62 Pfam PF12065 Protein of unknown function (DUF3545) 1 60 3.1E-20 T 14-10-2018 IPR021932 Protein of unknown function DUF3545 D172_009485 3b6b89c54b6067ebcc2a1daad5e12f9e 793 Gene3D G3DSA:2.170.130.10 108 228 3.3E-30 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_009485 3b6b89c54b6067ebcc2a1daad5e12f9e 793 SUPERFAMILY SSF49464 23 95 1.29E-8 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily D172_009485 3b6b89c54b6067ebcc2a1daad5e12f9e 793 Pfam PF13715 CarboxypepD_reg-like domain 25 104 2.5E-8 T 14-10-2018 D172_009485 3b6b89c54b6067ebcc2a1daad5e12f9e 793 Pfam PF07715 TonB-dependent Receptor Plug Domain 117 218 5.8E-20 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_009485 3b6b89c54b6067ebcc2a1daad5e12f9e 793 SUPERFAMILY SSF56935 100 792 1.24E-99 T 14-10-2018 D172_009485 3b6b89c54b6067ebcc2a1daad5e12f9e 793 Gene3D G3DSA:2.60.40.1120 25 107 2.9E-8 T 14-10-2018 D172_009485 3b6b89c54b6067ebcc2a1daad5e12f9e 793 Gene3D G3DSA:2.40.170.20 230 793 2.5E-62 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_009485 3b6b89c54b6067ebcc2a1daad5e12f9e 793 Pfam PF00593 TonB dependent receptor 361 790 5.9E-41 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_004460 fa3e084e01b0cab2353740612c0e1270 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 165 4.8E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D172_004460 fa3e084e01b0cab2353740612c0e1270 529 SUPERFAMILY SSF54980 393 468 2.45E-16 T 14-10-2018 IPR035647 EF-G domain III/V-like D172_004460 fa3e084e01b0cab2353740612c0e1270 529 SUPERFAMILY SSF52540 9 277 4.83E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_004460 fa3e084e01b0cab2353740612c0e1270 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 513 2.5E-45 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal D172_004460 fa3e084e01b0cab2353740612c0e1270 529 SUPERFAMILY SSF50447 262 393 1.77E-26 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D172_004460 fa3e084e01b0cab2353740612c0e1270 529 Pfam PF00009 Elongation factor Tu GTP binding domain 12 277 2.9E-45 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_004460 fa3e084e01b0cab2353740612c0e1270 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site D172_004460 fa3e084e01b0cab2353740612c0e1270 529 Gene3D G3DSA:3.40.50.300 110 275 1.3E-109 T 14-10-2018 D172_004460 fa3e084e01b0cab2353740612c0e1270 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.149 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 D172_004460 fa3e084e01b0cab2353740612c0e1270 529 Gene3D G3DSA:3.40.50.300 72 379 1.3E-109 T 14-10-2018 D172_004460 fa3e084e01b0cab2353740612c0e1270 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.5E-8 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D172_004460 fa3e084e01b0cab2353740612c0e1270 529 Gene3D G3DSA:3.30.70.3280 390 529 1.7E-49 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily D172_004460 fa3e084e01b0cab2353740612c0e1270 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_004460 fa3e084e01b0cab2353740612c0e1270 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_004460 fa3e084e01b0cab2353740612c0e1270 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_004460 fa3e084e01b0cab2353740612c0e1270 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_004460 fa3e084e01b0cab2353740612c0e1270 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 528 5.1E-293 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 D172_010385 c749223ff407fd68f0e95d6b1f4c55f8 858 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 79 403 5.1E-81 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_010385 c749223ff407fd68f0e95d6b1f4c55f8 858 PRINTS PR00133 Glycosyl hydrolase family 3 signature 169 188 7.3E-20 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_010385 c749223ff407fd68f0e95d6b1f4c55f8 858 PRINTS PR00133 Glycosyl hydrolase family 3 signature 145 161 7.3E-20 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_010385 c749223ff407fd68f0e95d6b1f4c55f8 858 PRINTS PR00133 Glycosyl hydrolase family 3 signature 325 343 7.3E-20 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_010385 c749223ff407fd68f0e95d6b1f4c55f8 858 PRINTS PR00133 Glycosyl hydrolase family 3 signature 215 231 7.3E-20 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_010385 c749223ff407fd68f0e95d6b1f4c55f8 858 PRINTS PR00133 Glycosyl hydrolase family 3 signature 255 271 7.3E-20 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_010385 c749223ff407fd68f0e95d6b1f4c55f8 858 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 444 658 3.9E-32 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 D172_010385 c749223ff407fd68f0e95d6b1f4c55f8 858 Gene3D G3DSA:3.20.20.300 64 427 2.6E-133 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 D172_010385 c749223ff407fd68f0e95d6b1f4c55f8 858 SUPERFAMILY SSF51445 66 443 4.84E-107 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_010385 c749223ff407fd68f0e95d6b1f4c55f8 858 SUPERFAMILY SSF49785 681 847 6.89E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_010385 c749223ff407fd68f0e95d6b1f4c55f8 858 Gene3D G3DSA:2.60.120.430 675 857 1.7E-23 T 14-10-2018 D172_010385 c749223ff407fd68f0e95d6b1f4c55f8 858 Gene3D G3DSA:3.40.50.1700 430 661 7.6E-67 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 D172_010385 c749223ff407fd68f0e95d6b1f4c55f8 858 SUPERFAMILY SSF52279 444 658 2.88E-45 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 D172_009185 5f68dc485ad5ddceeeda537446c67ffc 425 ProSitePatterns PS00104 EPSP synthase signature 1. 89 103 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 D172_009185 5f68dc485ad5ddceeeda537446c67ffc 425 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 2.3E-144 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 D172_009185 5f68dc485ad5ddceeeda537446c67ffc 425 Gene3D G3DSA:3.65.10.10 241 418 1.7E-145 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 D172_009185 5f68dc485ad5ddceeeda537446c67ffc 425 SUPERFAMILY SSF55205 1 423 4.06E-136 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 D172_009185 5f68dc485ad5ddceeeda537446c67ffc 425 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 D172_009185 5f68dc485ad5ddceeeda537446c67ffc 425 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 423 1.7E-142 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 D172_009185 5f68dc485ad5ddceeeda537446c67ffc 425 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 425 33.738 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 D172_009185 5f68dc485ad5ddceeeda537446c67ffc 425 Gene3D G3DSA:3.65.10.10 20 223 1.7E-145 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 D172_009185 5f68dc485ad5ddceeeda537446c67ffc 425 PIRSF PIRSF000505 3 425 2.3E-145 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 D172_017920 5f47d07f59196869b41e93a18e91dd8c 427 PIRSF PIRSF001235 18 427 4.9E-123 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 D172_017920 5f47d07f59196869b41e93a18e91dd8c 427 Gene3D G3DSA:3.30.70.360 227 341 1.1E-128 T 14-10-2018 D172_017920 5f47d07f59196869b41e93a18e91dd8c 427 SUPERFAMILY SSF53187 23 421 6.57E-74 T 14-10-2018 D172_017920 5f47d07f59196869b41e93a18e91dd8c 427 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 36 420 4.6E-110 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 D172_017920 5f47d07f59196869b41e93a18e91dd8c 427 SUPERFAMILY SSF55031 227 342 7.67E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain D172_017920 5f47d07f59196869b41e93a18e91dd8c 427 Pfam PF01546 Peptidase family M20/M25/M40 91 419 1.1E-20 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 D172_017920 5f47d07f59196869b41e93a18e91dd8c 427 Pfam PF07687 Peptidase dimerisation domain 226 323 2.7E-5 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain D172_017920 5f47d07f59196869b41e93a18e91dd8c 427 Gene3D G3DSA:3.40.630.10 37 416 1.1E-128 T 14-10-2018 D172_006030 a2efdcc692b8d0cde5fe37115cb339cc 583 SUPERFAMILY SSF52540 51 358 1.88E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006030 a2efdcc692b8d0cde5fe37115cb339cc 583 Pfam PF04851 Type III restriction enzyme, res subunit 3 155 1.5E-27 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 D172_006030 a2efdcc692b8d0cde5fe37115cb339cc 583 SUPERFAMILY SSF57829 422 465 2.75E-6 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 D172_006030 a2efdcc692b8d0cde5fe37115cb339cc 583 SMART SM00490 263 345 5.1E-12 T 14-10-2018 IPR001650 Helicase, C-terminal D172_006030 a2efdcc692b8d0cde5fe37115cb339cc 583 SMART SM00487 1 192 4.6E-19 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_006030 a2efdcc692b8d0cde5fe37115cb339cc 583 Gene3D G3DSA:3.40.50.300 210 377 2.4E-33 T 14-10-2018 D172_006030 a2efdcc692b8d0cde5fe37115cb339cc 583 Pfam PF00271 Helicase conserved C-terminal domain 241 343 1.0E-15 T 14-10-2018 IPR001650 Helicase, C-terminal D172_006030 a2efdcc692b8d0cde5fe37115cb339cc 583 Gene3D G3DSA:3.40.50.300 1 167 1.6E-31 T 14-10-2018 D172_005795 65b225f45c558f58d55227dfa404b045 190 PIRSF PIRSF005901 1 189 6.6E-60 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP D172_005795 65b225f45c558f58d55227dfa404b045 190 Pfam PF09285 Elongation factor P, C-terminal 132 187 6.1E-19 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 D172_005795 65b225f45c558f58d55227dfa404b045 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 1.3E-17 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like D172_005795 65b225f45c558f58d55227dfa404b045 190 SUPERFAMILY SSF50249 132 188 6.0E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_005795 65b225f45c558f58d55227dfa404b045 190 SMART SM00841 132 187 8.5E-26 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 D172_005795 65b225f45c558f58d55227dfa404b045 190 SMART SM01185 69 124 3.9E-16 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 D172_005795 65b225f45c558f58d55227dfa404b045 190 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site D172_005795 65b225f45c558f58d55227dfa404b045 190 Gene3D G3DSA:2.30.30.30 1 63 8.0E-12 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 D172_005795 65b225f45c558f58d55227dfa404b045 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 7.8E-81 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP D172_005795 65b225f45c558f58d55227dfa404b045 190 Gene3D G3DSA:2.40.50.140 131 188 8.2E-19 T 14-10-2018 D172_005795 65b225f45c558f58d55227dfa404b045 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 1.1E-14 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 D172_005795 65b225f45c558f58d55227dfa404b045 190 Gene3D G3DSA:2.40.50.140 67 130 8.1E-15 T 14-10-2018 D172_005795 65b225f45c558f58d55227dfa404b045 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 40.805 T 14-10-2018 IPR011897 Translation elongation factor P-like, YeiP D172_005795 65b225f45c558f58d55227dfa404b045 190 SUPERFAMILY SSF50249 67 129 7.71E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_005795 65b225f45c558f58d55227dfa404b045 190 SUPERFAMILY SSF50104 1 64 2.35E-11 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily D172_001210 a708402d07d1f377e1a85bb6cb5f7313 297 Gene3D G3DSA:3.10.129.10 150 297 2.6E-47 T 14-10-2018 D172_001210 a708402d07d1f377e1a85bb6cb5f7313 297 Pfam PF00583 Acetyltransferase (GNAT) family 20 122 2.0E-12 T 14-10-2018 IPR000182 GNAT domain D172_001210 a708402d07d1f377e1a85bb6cb5f7313 297 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 296 4.6E-51 T 14-10-2018 IPR012660 Thioesterase, putative D172_001210 a708402d07d1f377e1a85bb6cb5f7313 297 SUPERFAMILY SSF54637 153 296 2.54E-41 T 14-10-2018 IPR029069 HotDog domain superfamily D172_001210 a708402d07d1f377e1a85bb6cb5f7313 297 SUPERFAMILY SSF55729 2 160 3.43E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_001210 a708402d07d1f377e1a85bb6cb5f7313 297 Gene3D G3DSA:3.40.630.30 2 144 2.5E-25 T 14-10-2018 D172_001210 a708402d07d1f377e1a85bb6cb5f7313 297 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 295 1.7E-41 T 14-10-2018 IPR012660 Thioesterase, putative D172_005625 f8687d0c6f76bdf90e629e57ae215abd 548 SUPERFAMILY SSF52172 2 143 1.42E-39 T 14-10-2018 IPR011006 CheY-like superfamily D172_005625 f8687d0c6f76bdf90e629e57ae215abd 548 Pfam PF00072 Response regulator receiver domain 3 114 2.0E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005625 f8687d0c6f76bdf90e629e57ae215abd 548 Pfam PF13581 Histidine kinase-like ATPase domain 422 544 3.6E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_005625 f8687d0c6f76bdf90e629e57ae215abd 548 Gene3D G3DSA:3.30.565.10 412 548 8.2E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_005625 f8687d0c6f76bdf90e629e57ae215abd 548 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 189 374 2.4E-31 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D172_005625 f8687d0c6f76bdf90e629e57ae215abd 548 SUPERFAMILY SSF81606 174 374 9.68E-6 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D172_005625 f8687d0c6f76bdf90e629e57ae215abd 548 SMART SM00448 1 114 1.3E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005625 f8687d0c6f76bdf90e629e57ae215abd 548 Gene3D G3DSA:3.40.50.12740 1 166 8.2E-44 T 14-10-2018 D172_005625 f8687d0c6f76bdf90e629e57ae215abd 548 SMART SM00331 163 376 3.0E-9 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D172_005625 f8687d0c6f76bdf90e629e57ae215abd 548 Gene3D G3DSA:3.60.40.10 167 388 3.8E-33 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D172_013965 7b45f040a9f415608c77987547461ff0 310 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 141 3.4E-40 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 D172_013965 7b45f040a9f415608c77987547461ff0 310 Gene3D G3DSA:3.40.50.1370 3 130 4.2E-98 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D172_013965 7b45f040a9f415608c77987547461ff0 310 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 148 299 3.6E-46 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 D172_013965 7b45f040a9f415608c77987547461ff0 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 263 8.7E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D172_013965 7b45f040a9f415608c77987547461ff0 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 289 8.7E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D172_013965 7b45f040a9f415608c77987547461ff0 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 128 139 8.7E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D172_013965 7b45f040a9f415608c77987547461ff0 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 46 65 8.7E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D172_013965 7b45f040a9f415608c77987547461ff0 310 SUPERFAMILY SSF53671 2 302 4.19E-88 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D172_013965 7b45f040a9f415608c77987547461ff0 310 Gene3D G3DSA:3.40.50.1370 131 297 4.2E-98 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D172_013965 7b45f040a9f415608c77987547461ff0 310 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 301 1.9E-97 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 D172_013965 7b45f040a9f415608c77987547461ff0 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 280 291 1.9E-21 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 D172_013965 7b45f040a9f415608c77987547461ff0 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 77 90 1.9E-21 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 D172_013965 7b45f040a9f415608c77987547461ff0 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 219 229 1.9E-21 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 D172_013965 7b45f040a9f415608c77987547461ff0 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 117 131 1.9E-21 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 D172_013965 7b45f040a9f415608c77987547461ff0 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 44 58 1.9E-21 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 D172_004425 e4fba55cf16299aea0320dd4d81d49b1 444 Pfam PF02601 Exonuclease VII, large subunit 126 440 1.0E-101 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 D172_004425 e4fba55cf16299aea0320dd4d81d49b1 444 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 358 1.1E-135 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 D172_004425 e4fba55cf16299aea0320dd4d81d49b1 444 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 29.654 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 D172_004425 e4fba55cf16299aea0320dd4d81d49b1 444 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 1.3E-28 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 D172_018975 2e46ad4f14e24ead534dceb429d00d2e 960 Gene3D G3DSA:3.30.830.10 275 503 1.7E-64 T 14-10-2018 D172_018975 2e46ad4f14e24ead534dceb429d00d2e 960 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 78 101 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 D172_018975 2e46ad4f14e24ead534dceb429d00d2e 960 SUPERFAMILY SSF63411 36 265 3.46E-51 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D172_018975 2e46ad4f14e24ead534dceb429d00d2e 960 Pfam PF05193 Peptidase M16 inactive domain 683 859 2.1E-5 T 14-10-2018 IPR007863 Peptidase M16, C-terminal D172_018975 2e46ad4f14e24ead534dceb429d00d2e 960 Pfam PF05193 Peptidase M16 inactive domain 222 397 2.9E-18 T 14-10-2018 IPR007863 Peptidase M16, C-terminal D172_018975 2e46ad4f14e24ead534dceb429d00d2e 960 SUPERFAMILY SSF63411 271 510 8.76E-66 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D172_018975 2e46ad4f14e24ead534dceb429d00d2e 960 SUPERFAMILY SSF63411 505 729 1.47E-36 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D172_018975 2e46ad4f14e24ead534dceb429d00d2e 960 Pfam PF16187 Middle or third domain of peptidase_M16 402 678 1.5E-57 T 14-10-2018 IPR032632 Peptidase M16, middle/third domain D172_018975 2e46ad4f14e24ead534dceb429d00d2e 960 Gene3D G3DSA:3.30.830.10 653 919 3.3E-97 T 14-10-2018 D172_018975 2e46ad4f14e24ead534dceb429d00d2e 960 Gene3D G3DSA:3.30.830.10 505 887 3.3E-97 T 14-10-2018 D172_018975 2e46ad4f14e24ead534dceb429d00d2e 960 SUPERFAMILY SSF63411 739 955 2.27E-44 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D172_018975 2e46ad4f14e24ead534dceb429d00d2e 960 Gene3D G3DSA:3.30.830.10 30 272 8.7E-73 T 14-10-2018 D172_018975 2e46ad4f14e24ead534dceb429d00d2e 960 Pfam PF00675 Insulinase (Peptidase family M16) 58 193 2.0E-33 T 14-10-2018 IPR011765 Peptidase M16, N-terminal D172_000880 78a84d15113da914a72812f4d23415bf 497 SUPERFAMILY SSF53067 135 306 8.1E-42 T 14-10-2018 D172_000880 78a84d15113da914a72812f4d23415bf 497 SUPERFAMILY SSF109604 310 496 6.91E-44 T 14-10-2018 D172_000880 78a84d15113da914a72812f4d23415bf 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 5 497 51.076 T 14-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 D172_000880 78a84d15113da914a72812f4d23415bf 497 Gene3D G3DSA:3.30.420.40 12 300 6.1E-78 T 14-10-2018 D172_000880 78a84d15113da914a72812f4d23415bf 497 Pfam PF02541 Ppx/GppA phosphatase family 25 305 1.2E-79 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 D172_000880 78a84d15113da914a72812f4d23415bf 497 PIRSF PIRSF001267 2 497 2.2E-174 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 D172_000880 78a84d15113da914a72812f4d23415bf 497 SUPERFAMILY SSF53067 11 130 5.65E-35 T 14-10-2018 D172_000880 78a84d15113da914a72812f4d23415bf 497 Gene3D G3DSA:3.30.420.150 115 292 6.1E-78 T 14-10-2018 D172_000880 78a84d15113da914a72812f4d23415bf 497 Gene3D G3DSA:1.10.3210.10 307 497 3.8E-52 T 14-10-2018 D172_005605 51e8f416a048a46f7c296a823da87647 386 Gene3D G3DSA:1.20.59.10 1 108 2.4E-29 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D172_005605 51e8f416a048a46f7c296a823da87647 386 Pfam PF00800 Prephenate dehydratase 106 285 1.9E-50 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 D172_005605 51e8f416a048a46f7c296a823da87647 386 Gene3D G3DSA:3.40.190.10 189 272 3.2E-48 T 14-10-2018 D172_005605 51e8f416a048a46f7c296a823da87647 386 SMART SM00830 10 90 2.7E-23 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D172_005605 51e8f416a048a46f7c296a823da87647 386 Pfam PF01817 Chorismate mutase type II 10 88 1.6E-15 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D172_005605 51e8f416a048a46f7c296a823da87647 386 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 6 88 3.7E-23 T 14-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 D172_005605 51e8f416a048a46f7c296a823da87647 386 SUPERFAMILY SSF48600 6 92 2.93E-19 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D172_005605 51e8f416a048a46f7c296a823da87647 386 SUPERFAMILY SSF53850 105 290 9.44E-50 T 14-10-2018 D172_005605 51e8f416a048a46f7c296a823da87647 386 Gene3D G3DSA:3.30.70.260 289 376 6.6E-30 T 14-10-2018 D172_005605 51e8f416a048a46f7c296a823da87647 386 PIRSF PIRSF001500 1 378 5.3E-120 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 D172_005605 51e8f416a048a46f7c296a823da87647 386 Pfam PF01842 ACT domain 297 361 4.9E-7 T 14-10-2018 IPR002912 ACT domain D172_005605 51e8f416a048a46f7c296a823da87647 386 SUPERFAMILY SSF55021 278 375 3.7E-26 T 14-10-2018 D172_005605 51e8f416a048a46f7c296a823da87647 386 Gene3D G3DSA:3.40.190.10 109 281 3.2E-48 T 14-10-2018 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 Pfam PF02142 MGS-like domain 956 1039 6.2E-17 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 SUPERFAMILY SSF52440 1 127 5.9E-51 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 Gene3D G3DSA:3.30.470.20 119 403 2.4E-128 T 14-10-2018 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 SUPERFAMILY SSF48108 397 554 5.36E-52 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.6E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.6E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.6E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.6E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.6E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.6E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.6E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 7.9E-39 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 SUPERFAMILY SSF52440 556 675 2.59E-50 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.1 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 Gene3D G3DSA:3.40.50.20 1 116 3.4E-51 T 14-10-2018 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 Gene3D G3DSA:3.30.470.20 665 935 1.8E-120 T 14-10-2018 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 Gene3D G3DSA:3.40.50.1380 936 1072 6.5E-36 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 Gene3D G3DSA:3.40.50.20 554 662 6.1E-50 T 14-10-2018 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 SMART SM00851 955 1041 1.6E-30 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 SUPERFAMILY SSF56059 673 933 7.42E-101 T 14-10-2018 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.396 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 SUPERFAMILY SSF56059 128 401 2.3E-107 T 14-10-2018 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 SUPERFAMILY SSF52335 937 1068 2.22E-38 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 Gene3D G3DSA:1.10.1030.10 404 553 6.2E-51 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 334 1.9E-71 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 1.1E-35 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1051 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010865 2518d5c8469a4edd36afaa6d071b8998 1072 SMART SM01096 424 547 1.3E-73 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_006850 477d246f2873b18e99645447a8470b03 791 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 246 788 1.2E-154 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 D172_006850 477d246f2873b18e99645447a8470b03 791 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 229 788 1.0E-141 T 14-10-2018 D172_006850 477d246f2873b18e99645447a8470b03 791 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 87 8.9E-23 T 14-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase D172_006850 477d246f2873b18e99645447a8470b03 791 ProSitePatterns PS01229 Hypothetical cof family signature 2. 686 708 - T 14-10-2018 D172_006850 477d246f2873b18e99645447a8470b03 791 Pfam PF00702 haloacid dehalogenase-like hydrolase 502 699 9.7E-31 T 14-10-2018 D172_006850 477d246f2873b18e99645447a8470b03 791 SUPERFAMILY SSF81665 280 500 1.7E-11 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 D172_006850 477d246f2873b18e99645447a8470b03 791 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 280 769 1.3E-71 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 D172_006850 477d246f2873b18e99645447a8470b03 791 Pfam PF00403 Heavy-metal-associated domain 95 155 4.3E-10 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 D172_006850 477d246f2873b18e99645447a8470b03 791 SUPERFAMILY SSF56784 504 786 4.0E-48 T 14-10-2018 IPR036412 HAD-like superfamily D172_006850 477d246f2873b18e99645447a8470b03 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 358 372 3.3E-21 T 14-10-2018 D172_006850 477d246f2873b18e99645447a8470b03 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 506 520 3.3E-21 T 14-10-2018 D172_006850 477d246f2873b18e99645447a8470b03 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 686 705 3.3E-21 T 14-10-2018 D172_006850 477d246f2873b18e99645447a8470b03 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 633 643 3.3E-21 T 14-10-2018 D172_006850 477d246f2873b18e99645447a8470b03 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 709 721 3.3E-21 T 14-10-2018 D172_006850 477d246f2873b18e99645447a8470b03 791 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 273 790 2.8E-119 T 14-10-2018 D172_006850 477d246f2873b18e99645447a8470b03 791 SUPERFAMILY SSF81653 315 407 7.19E-24 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 D172_006850 477d246f2873b18e99645447a8470b03 791 SUPERFAMILY SSF55008 86 161 1.44E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 D172_006850 477d246f2873b18e99645447a8470b03 791 Pfam PF00122 E1-E2 ATPase 308 486 2.0E-46 T 14-10-2018 D172_006850 477d246f2873b18e99645447a8470b03 791 Gene3D G3DSA:3.40.50.1000 486 725 3.9E-69 T 14-10-2018 IPR023214 HAD superfamily D172_006850 477d246f2873b18e99645447a8470b03 791 Gene3D G3DSA:2.70.150.20 302 412 2.6E-30 T 14-10-2018 D172_006850 477d246f2873b18e99645447a8470b03 791 Gene3D G3DSA:3.30.70.100 91 175 4.8E-16 T 14-10-2018 D172_006850 477d246f2873b18e99645447a8470b03 791 Gene3D G3DSA:3.40.1110.10 516 618 3.9E-69 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 D172_006850 477d246f2873b18e99645447a8470b03 791 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 508 514 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 D172_008660 8fb349a5fa9c168893a62bb34d83d564 304 Gene3D G3DSA:2.60.120.620 143 269 1.3E-10 T 14-10-2018 D172_008660 8fb349a5fa9c168893a62bb34d83d564 304 SUPERFAMILY SSF51197 98 273 1.17E-9 T 14-10-2018 D172_008660 8fb349a5fa9c168893a62bb34d83d564 304 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 185 267 5.6E-5 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 D172_018485 74eea70436871456824b47eeb44a0ace 287 Pfam PF00892 EamA-like transporter family 10 131 3.0E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_018485 74eea70436871456824b47eeb44a0ace 287 Pfam PF00892 EamA-like transporter family 146 277 9.2E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_018485 74eea70436871456824b47eeb44a0ace 287 SUPERFAMILY SSF103481 183 281 1.06E-10 T 14-10-2018 D172_018485 74eea70436871456824b47eeb44a0ace 287 SUPERFAMILY SSF103481 44 134 5.36E-8 T 14-10-2018 D172_020910 de417bae90518144da23a064d9dd751f 539 SUPERFAMILY SSF58104 246 539 9.94E-66 T 14-10-2018 D172_020910 de417bae90518144da23a064d9dd751f 539 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 170 5.5E-15 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain D172_020910 de417bae90518144da23a064d9dd751f 539 SMART SM00283 277 538 9.6E-72 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_020910 de417bae90518144da23a064d9dd751f 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 351 505 2.3E-45 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_020910 de417bae90518144da23a064d9dd751f 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 2.6E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_020910 de417bae90518144da23a064d9dd751f 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 2.6E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_020910 de417bae90518144da23a064d9dd751f 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 13 38 2.6E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_020910 de417bae90518144da23a064d9dd751f 539 Gene3D G3DSA:1.10.287.950 218 539 4.4E-63 T 14-10-2018 D172_011500 c4fb19b2738abe15135fc87d9db53c6e 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 3.5E-89 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 D172_011500 c4fb19b2738abe15135fc87d9db53c6e 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 4.7E-61 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 D172_011500 c4fb19b2738abe15135fc87d9db53c6e 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.142 T 14-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 D172_011500 c4fb19b2738abe15135fc87d9db53c6e 193 PIRSF PIRSF006102 1 193 3.7E-63 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 D172_007705 97a76b9495d71735aed46c9bef0646d7 711 SUPERFAMILY SSF48695 21 462 1.66E-56 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily D172_007705 97a76b9495d71735aed46c9bef0646d7 711 Gene3D G3DSA:1.10.1130.10 344 419 1.1E-5 T 14-10-2018 D172_007705 97a76b9495d71735aed46c9bef0646d7 711 Gene3D G3DSA:1.10.1130.10 135 343 4.6E-13 T 14-10-2018 D172_007705 97a76b9495d71735aed46c9bef0646d7 711 SMART SM00028 583 616 70.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_007705 97a76b9495d71735aed46c9bef0646d7 711 SMART SM00028 549 582 150.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_007705 97a76b9495d71735aed46c9bef0646d7 711 SMART SM00028 617 650 0.8 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_007705 97a76b9495d71735aed46c9bef0646d7 711 Pfam PF13181 Tetratricopeptide repeat 585 611 0.042 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_007705 97a76b9495d71735aed46c9bef0646d7 711 Gene3D G3DSA:1.25.40.10 537 709 3.2E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_007705 97a76b9495d71735aed46c9bef0646d7 711 Pfam PF13435 Cytochrome c554 and c-prime 192 253 0.0071 T 14-10-2018 IPR023155 Cytochrome c-552/4 D172_007705 97a76b9495d71735aed46c9bef0646d7 711 Pfam PF13435 Cytochrome c554 and c-prime 26 51 2.5E-4 T 14-10-2018 IPR023155 Cytochrome c-552/4 D172_007705 97a76b9495d71735aed46c9bef0646d7 711 SUPERFAMILY SSF48452 554 706 2.36E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_000310 8822e065a475b17dc065736a74e727bc 280 Pfam PF04397 LytTr DNA-binding domain 186 279 7.5E-20 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 D172_000310 8822e065a475b17dc065736a74e727bc 280 PIRSF PIRSF031767 5 279 4.5E-63 T 14-10-2018 IPR012379 LytTR MHYE transcriptional regulator, putative D172_000310 8822e065a475b17dc065736a74e727bc 280 Gene3D G3DSA:2.40.50.40 174 242 6.5E-10 T 14-10-2018 D172_000310 8822e065a475b17dc065736a74e727bc 280 SMART SM00850 183 280 6.9E-23 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 D172_013810 9f3c2b3b5d95e227493ca08a7525b166 263 SUPERFAMILY SSF52096 2 251 2.57E-58 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_013810 9f3c2b3b5d95e227493ca08a7525b166 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 5 229 3.5E-35 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 D172_013810 9f3c2b3b5d95e227493ca08a7525b166 263 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 D172_013810 9f3c2b3b5d95e227493ca08a7525b166 263 Gene3D G3DSA:3.90.226.10 1 255 1.7E-58 T 14-10-2018 D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 Gene3D G3DSA:3.30.559.10 1136 1335 7.1E-18 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 ProSitePatterns PS00455 Putative AMP-binding domain signature. 679 690 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 SUPERFAMILY SSF52777 1153 1340 7.56E-14 T 14-10-2018 D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1086 1101 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 Gene3D G3DSA:3.30.300.30 941 1048 1.1E-18 T 14-10-2018 D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 549 961 9.5E-99 T 14-10-2018 IPR010071 Amino acid adenylation domain D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 Gene3D G3DSA:3.30.559.10 49 423 1.0E-103 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 Pfam PF00550 Phosphopantetheine attachment site 1064 1125 7.2E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 Pfam PF00501 AMP-binding enzyme 512 947 3.1E-82 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 SUPERFAMILY SSF52777 1796 2039 3.56E-25 T 14-10-2018 D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 SUPERFAMILY SSF52777 236 477 6.23E-48 T 14-10-2018 D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 Pfam PF00668 Condensation domain 1615 1964 5.1E-33 T 14-10-2018 IPR001242 Condensation domain D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 Pfam PF00668 Condensation domain 1186 1348 1.3E-7 T 14-10-2018 IPR001242 Condensation domain D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 Pfam PF00668 Condensation domain 44 493 1.7E-83 T 14-10-2018 IPR001242 Condensation domain D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 SUPERFAMILY SSF52777 49 227 3.56E-36 T 14-10-2018 D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 Gene3D G3DSA:3.30.559.30 233 478 1.0E-103 T 14-10-2018 D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 SUPERFAMILY SSF56801 486 1075 5.63E-110 T 14-10-2018 D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 SUPERFAMILY SSF47336 1055 1126 8.77E-17 T 14-10-2018 IPR036736 ACP-like superfamily D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 Gene3D G3DSA:3.40.50.12780 500 940 2.0E-100 T 14-10-2018 D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 Gene3D G3DSA:1.10.1200.10 1052 1130 1.1E-20 T 14-10-2018 IPR036736 ACP-like superfamily D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 Gene3D G3DSA:3.30.559.30 1790 2036 7.3E-59 T 14-10-2018 D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 SUPERFAMILY SSF52777 1613 1804 4.34E-20 T 14-10-2018 D172_020555 64ccb99afd0f80855ec8792a43334b65 2068 Gene3D G3DSA:3.30.559.10 1617 1987 7.3E-59 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D172_000450 ebcbf467b3e8c3d323f6e31a8f1d9959 69 SUPERFAMILY SSF50249 4 68 3.81E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_000450 ebcbf467b3e8c3d323f6e31a8f1d9959 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 3.9E-29 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_000450 ebcbf467b3e8c3d323f6e31a8f1d9959 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 14-10-2018 IPR019844 Cold-shock conserved site D172_000450 ebcbf467b3e8c3d323f6e31a8f1d9959 69 PRINTS PR00050 Cold shock protein signature 7 22 4.8E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_000450 ebcbf467b3e8c3d323f6e31a8f1d9959 69 PRINTS PR00050 Cold shock protein signature 42 60 4.8E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_000450 ebcbf467b3e8c3d323f6e31a8f1d9959 69 PRINTS PR00050 Cold shock protein signature 27 36 4.8E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_000450 ebcbf467b3e8c3d323f6e31a8f1d9959 69 PIRSF PIRSF002599 1 69 1.7E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 D172_000450 ebcbf467b3e8c3d323f6e31a8f1d9959 69 Gene3D G3DSA:2.40.50.140 4 67 4.4E-28 T 14-10-2018 D172_000450 ebcbf467b3e8c3d323f6e31a8f1d9959 69 SMART SM00357 6 69 5.8E-28 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 D172_019820 b530746ac2e944ac57b5870305bd1333 638 SMART SM00491 478 607 4.3E-44 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 D172_019820 b530746ac2e944ac57b5870305bd1333 638 Gene3D G3DSA:3.40.50.300 22 284 6.6E-45 T 14-10-2018 D172_019820 b530746ac2e944ac57b5870305bd1333 638 Pfam PF13307 Helicase C-terminal domain 461 620 1.5E-38 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 D172_019820 b530746ac2e944ac57b5870305bd1333 638 SUPERFAMILY SSF52540 19 603 4.32E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_019820 b530746ac2e944ac57b5870305bd1333 638 SUPERFAMILY SSF52540 448 604 3.15E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_019820 b530746ac2e944ac57b5870305bd1333 638 Gene3D G3DSA:3.40.50.300 443 637 2.1E-40 T 14-10-2018 D172_012945 dba1232bcbd91ca2789950026f286c98 647 Gene3D G3DSA:3.40.50.410 85 285 1.2E-31 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily D172_012945 dba1232bcbd91ca2789950026f286c98 647 Gene3D G3DSA:1.25.40.10 373 465 4.2E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_012945 dba1232bcbd91ca2789950026f286c98 647 Pfam PF13519 von Willebrand factor type A domain 91 197 1.2E-13 T 14-10-2018 IPR002035 von Willebrand factor, type A D172_012945 dba1232bcbd91ca2789950026f286c98 647 SMART SM00028 398 431 2.3E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_012945 dba1232bcbd91ca2789950026f286c98 647 SUPERFAMILY SSF53300 91 279 1.63E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily D172_012945 dba1232bcbd91ca2789950026f286c98 647 Pfam PF07719 Tetratricopeptide repeat 399 428 1.6E-5 T 14-10-2018 IPR013105 Tetratricopeptide repeat 2 D172_012945 dba1232bcbd91ca2789950026f286c98 647 SUPERFAMILY SSF48452 352 452 8.86E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_010715 d79da7d232aab77b61b2d5a3b52b5106 483 Gene3D G3DSA:3.30.420.10 4 203 1.5E-71 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_010715 d79da7d232aab77b61b2d5a3b52b5106 483 Gene3D G3DSA:1.20.1280.70 362 423 2.6E-24 T 14-10-2018 D172_010715 d79da7d232aab77b61b2d5a3b52b5106 483 Pfam PF00929 Exonuclease 15 195 2.0E-24 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D172_010715 d79da7d232aab77b61b2d5a3b52b5106 483 SUPERFAMILY SSF53098 12 483 3.52E-132 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_010715 d79da7d232aab77b61b2d5a3b52b5106 483 Pfam PF08411 Exonuclease C-terminal 214 481 5.2E-102 T 14-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 D172_010715 d79da7d232aab77b61b2d5a3b52b5106 483 PIRSF PIRSF000977 5 483 2.0E-201 T 14-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 D172_010715 d79da7d232aab77b61b2d5a3b52b5106 483 Gene3D G3DSA:2.30.30.450 216 356 2.2E-52 T 14-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily D172_013895 732cfb24ead1a2a9bdfc375e0d325cd1 160 Gene3D G3DSA:3.30.70.860 95 160 3.2E-31 T 14-10-2018 IPR035571 UPF0234-like, C-terminal D172_013895 732cfb24ead1a2a9bdfc375e0d325cd1 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 7.9E-62 T 14-10-2018 IPR007551 Protein of unknown function DUF520 D172_013895 732cfb24ead1a2a9bdfc375e0d325cd1 160 SUPERFAMILY SSF89963 89 160 6.02E-29 T 14-10-2018 IPR036183 YajQ-like superfamily D172_013895 732cfb24ead1a2a9bdfc375e0d325cd1 160 SUPERFAMILY SSF89963 2 86 5.75E-29 T 14-10-2018 IPR036183 YajQ-like superfamily D172_013895 732cfb24ead1a2a9bdfc375e0d325cd1 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 28.465 T 14-10-2018 IPR007551 Protein of unknown function DUF520 D172_013895 732cfb24ead1a2a9bdfc375e0d325cd1 160 Gene3D G3DSA:3.30.70.990 9 94 5.8E-26 T 14-10-2018 IPR035570 UPF0234, N-terminal D172_004300 26eb2f7a716a9a8668e0d88e7277562f 367 Gene3D G3DSA:2.30.130.10 265 367 1.4E-30 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 D172_004300 26eb2f7a716a9a8668e0d88e7277562f 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D172_004300 26eb2f7a716a9a8668e0d88e7277562f 367 PIRSF PIRSF000729 1 367 1.5E-130 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 D172_004300 26eb2f7a716a9a8668e0d88e7277562f 367 Pfam PF00696 Amino acid kinase family 6 233 3.8E-40 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D172_004300 26eb2f7a716a9a8668e0d88e7277562f 367 Pfam PF01472 PUA domain 276 347 1.2E-19 T 14-10-2018 IPR002478 PUA domain GO:0003723 D172_004300 26eb2f7a716a9a8668e0d88e7277562f 367 Gene3D G3DSA:3.40.1160.10 1 259 2.8E-85 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D172_004300 26eb2f7a716a9a8668e0d88e7277562f 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 6 366 3.4E-136 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D172_004300 26eb2f7a716a9a8668e0d88e7277562f 367 SMART SM00359 276 359 5.5E-13 T 14-10-2018 IPR002478 PUA domain GO:0003723 D172_004300 26eb2f7a716a9a8668e0d88e7277562f 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 262 35.419 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D172_004300 26eb2f7a716a9a8668e0d88e7277562f 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 4.2E-55 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D172_004300 26eb2f7a716a9a8668e0d88e7277562f 367 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 4.2E-55 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D172_004300 26eb2f7a716a9a8668e0d88e7277562f 367 PRINTS PR00474 Glutamate 5-kinase family signature 75 103 4.2E-55 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D172_004300 26eb2f7a716a9a8668e0d88e7277562f 367 PRINTS PR00474 Glutamate 5-kinase family signature 147 174 4.2E-55 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D172_004300 26eb2f7a716a9a8668e0d88e7277562f 367 PRINTS PR00474 Glutamate 5-kinase family signature 115 136 4.2E-55 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D172_004300 26eb2f7a716a9a8668e0d88e7277562f 367 SUPERFAMILY SSF88697 276 366 1.04E-21 T 14-10-2018 IPR015947 PUA-like superfamily D172_004300 26eb2f7a716a9a8668e0d88e7277562f 367 SUPERFAMILY SSF53633 6 255 8.25E-66 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D172_019670 dcb48ec3ba1d5961548013873b9c0362 574 Gene3D G3DSA:3.40.50.970 1 183 1.1E-71 T 14-10-2018 D172_019670 dcb48ec3ba1d5961548013873b9c0362 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 333 1.1E-42 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 D172_019670 dcb48ec3ba1d5961548013873b9c0362 574 Gene3D G3DSA:3.40.50.970 366 563 2.9E-66 T 14-10-2018 D172_019670 dcb48ec3ba1d5961548013873b9c0362 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 7 568 5.0E-254 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 D172_019670 dcb48ec3ba1d5961548013873b9c0362 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 1.2E-49 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 D172_019670 dcb48ec3ba1d5961548013873b9c0362 574 SUPERFAMILY SSF52518 373 569 1.63E-69 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_019670 dcb48ec3ba1d5961548013873b9c0362 574 Gene3D G3DSA:3.40.50.1220 191 362 1.1E-54 T 14-10-2018 D172_019670 dcb48ec3ba1d5961548013873b9c0362 574 SUPERFAMILY SSF52518 2 183 2.73E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_019670 dcb48ec3ba1d5961548013873b9c0362 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 D172_019670 dcb48ec3ba1d5961548013873b9c0362 574 SUPERFAMILY SSF52467 191 364 7.41E-57 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily D172_019670 dcb48ec3ba1d5961548013873b9c0362 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 172 2.2E-59 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 D172_005105 d6fc45ce4f9f41311123ea8e658773ff 324 SMART SM00387 204 316 3.0E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_005105 d6fc45ce4f9f41311123ea8e658773ff 324 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 209 313 7.8E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_005105 d6fc45ce4f9f41311123ea8e658773ff 324 Gene3D G3DSA:3.30.565.10 158 315 5.3E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_005105 d6fc45ce4f9f41311123ea8e658773ff 324 SUPERFAMILY SSF47384 56 165 6.28E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_005105 d6fc45ce4f9f41311123ea8e658773ff 324 Gene3D G3DSA:1.10.287.130 39 157 2.5E-21 T 14-10-2018 D172_005105 d6fc45ce4f9f41311123ea8e658773ff 324 PRINTS PR00344 Bacterial sensor protein C-terminal signature 245 259 1.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_005105 d6fc45ce4f9f41311123ea8e658773ff 324 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 294 1.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_005105 d6fc45ce4f9f41311123ea8e658773ff 324 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 313 1.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_005105 d6fc45ce4f9f41311123ea8e658773ff 324 PRINTS PR00344 Bacterial sensor protein C-terminal signature 263 273 1.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_005105 d6fc45ce4f9f41311123ea8e658773ff 324 Pfam PF00512 His Kinase A (phospho-acceptor) domain 63 162 3.7E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_005105 d6fc45ce4f9f41311123ea8e658773ff 324 SUPERFAMILY SSF55874 166 314 1.7E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_012125 716923ed16f8a90f2229114d45a5b7ea 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 20 59 7.0E-9 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 D172_012125 716923ed16f8a90f2229114d45a5b7ea 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 68 154 4.6E-25 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D172_012125 716923ed16f8a90f2229114d45a5b7ea 157 SUPERFAMILY SSF54534 22 156 2.75E-44 T 14-10-2018 D172_012125 716923ed16f8a90f2229114d45a5b7ea 157 Gene3D G3DSA:3.10.50.40 18 157 6.7E-47 T 14-10-2018 D172_010195 dc5bbe116fb9a546dd858ea92a9fe9e4 100 Pfam PF03795 YCII-related domain 1 95 3.2E-27 T 14-10-2018 IPR005545 YCII-related D172_010195 dc5bbe116fb9a546dd858ea92a9fe9e4 100 SUPERFAMILY SSF54909 1 98 2.95E-30 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel D172_010195 dc5bbe116fb9a546dd858ea92a9fe9e4 100 Gene3D G3DSA:3.30.70.1060 1 98 2.5E-36 T 14-10-2018 D172_019545 5af5af029650e3d2f639651ac201c6d5 360 Gene3D G3DSA:2.40.50.100 58 190 1.7E-80 T 14-10-2018 D172_019545 5af5af029650e3d2f639651ac201c6d5 360 Pfam PF13533 Biotin-lipoyl like 63 100 7.6E-6 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain D172_019545 5af5af029650e3d2f639651ac201c6d5 360 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 354 2.1E-75 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D172_019545 5af5af029650e3d2f639651ac201c6d5 360 Gene3D G3DSA:2.40.420.20 43 351 1.7E-80 T 14-10-2018 D172_019545 5af5af029650e3d2f639651ac201c6d5 360 Pfam PF13437 HlyD family secretion protein 156 256 2.3E-10 T 14-10-2018 D172_019545 5af5af029650e3d2f639651ac201c6d5 360 Gene3D G3DSA:1.10.287.470 92 151 1.7E-80 T 14-10-2018 D172_019545 5af5af029650e3d2f639651ac201c6d5 360 SUPERFAMILY SSF111369 50 260 1.83E-28 T 14-10-2018 D172_019545 5af5af029650e3d2f639651ac201c6d5 360 Gene3D G3DSA:2.40.30.170 44 269 1.7E-80 T 14-10-2018 D172_007010 bd4f8685ade33bdd72746824b489c05d 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 182 1.7E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_007010 bd4f8685ade33bdd72746824b489c05d 219 SUPERFAMILY SSF56784 5 217 4.61E-53 T 14-10-2018 IPR036412 HAD-like superfamily D172_007010 bd4f8685ade33bdd72746824b489c05d 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 188 1.2E-32 T 14-10-2018 D172_007010 bd4f8685ade33bdd72746824b489c05d 219 Gene3D G3DSA:1.10.150.240 24 88 4.9E-49 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D172_007010 bd4f8685ade33bdd72746824b489c05d 219 Gene3D G3DSA:3.40.50.1000 12 209 4.9E-49 T 14-10-2018 IPR023214 HAD superfamily D172_007010 bd4f8685ade33bdd72746824b489c05d 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 54 188 1.0E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_007715 b81819fda923577602806834e7a7384c 387 Pfam PF13378 Enolase C-terminal domain-like 135 362 8.0E-47 T 14-10-2018 IPR029065 Enolase C-terminal domain-like D172_007715 b81819fda923577602806834e7a7384c 387 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 189 220 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 D172_007715 b81819fda923577602806834e7a7384c 387 SUPERFAMILY SSF54826 1 115 4.18E-29 T 14-10-2018 D172_007715 b81819fda923577602806834e7a7384c 387 Gene3D G3DSA:3.30.390.10 16 375 5.0E-119 T 14-10-2018 IPR029017 Enolase-like, N-terminal D172_007715 b81819fda923577602806834e7a7384c 387 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 85 110 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 D172_007715 b81819fda923577602806834e7a7384c 387 SUPERFAMILY SSF51604 98 365 2.88E-63 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily D172_007715 b81819fda923577602806834e7a7384c 387 Gene3D G3DSA:3.20.20.120 105 351 5.0E-119 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily D172_007715 b81819fda923577602806834e7a7384c 387 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 10 110 1.6E-18 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain D172_007715 b81819fda923577602806834e7a7384c 387 SMART SM00922 132 239 2.1E-13 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal D172_013055 24784decb57a032ea6ff6b5ff2a11915 167 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 28 92 2.1E-7 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D172_013055 24784decb57a032ea6ff6b5ff2a11915 167 Gene3D G3DSA:3.40.50.1240 27 159 2.7E-15 T 14-10-2018 IPR029033 Histidine phosphatase superfamily D172_013055 24784decb57a032ea6ff6b5ff2a11915 167 PIRSF PIRSF000709 8 141 1.7E-5 T 14-10-2018 D172_013055 24784decb57a032ea6ff6b5ff2a11915 167 SUPERFAMILY SSF53254 27 136 3.01E-13 T 14-10-2018 IPR029033 Histidine phosphatase superfamily D172_012645 47268743bf0a80dae296b1a2a0a8fa4a 401 SUPERFAMILY SSF55347 129 277 5.56E-63 T 14-10-2018 D172_012645 47268743bf0a80dae296b1a2a0a8fa4a 401 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 149 242 2.2E-37 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D172_012645 47268743bf0a80dae296b1a2a0a8fa4a 401 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 400 3.1E-159 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D172_012645 47268743bf0a80dae296b1a2a0a8fa4a 401 Gene3D G3DSA:1.10.1740.10 315 401 8.8E-27 T 14-10-2018 D172_012645 47268743bf0a80dae296b1a2a0a8fa4a 401 Gene3D G3DSA:3.40.50.720 1 153 8.9E-50 T 14-10-2018 D172_012645 47268743bf0a80dae296b1a2a0a8fa4a 401 SUPERFAMILY SSF51735 5 153 1.92E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_012645 47268743bf0a80dae296b1a2a0a8fa4a 401 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 7 395 44.778 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D172_012645 47268743bf0a80dae296b1a2a0a8fa4a 401 SUPERFAMILY SSF69055 305 398 1.44E-29 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D172_012645 47268743bf0a80dae296b1a2a0a8fa4a 401 Pfam PF13288 DXP reductoisomerase C-terminal domain 274 389 4.9E-39 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D172_012645 47268743bf0a80dae296b1a2a0a8fa4a 401 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 135 3.1E-43 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D172_012645 47268743bf0a80dae296b1a2a0a8fa4a 401 PIRSF PIRSF006205 4 401 4.3E-148 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 D172_013455 b3ad28c32d5b62a9fe15aeba540708f3 478 Gene3D G3DSA:3.40.50.300 119 300 1.4E-66 T 14-10-2018 D172_013455 b3ad28c32d5b62a9fe15aeba540708f3 478 Gene3D G3DSA:1.10.10.60 409 477 1.4E-13 T 14-10-2018 D172_013455 b3ad28c32d5b62a9fe15aeba540708f3 478 Pfam PF02954 Bacterial regulatory protein, Fis family 433 473 8.1E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_013455 b3ad28c32d5b62a9fe15aeba540708f3 478 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 341 350 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site D172_013455 b3ad28c32d5b62a9fe15aeba540708f3 478 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 456 4.8E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_013455 b3ad28c32d5b62a9fe15aeba540708f3 478 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 456 476 4.8E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_013455 b3ad28c32d5b62a9fe15aeba540708f3 478 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 153 166 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D172_013455 b3ad28c32d5b62a9fe15aeba540708f3 478 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D172_013455 b3ad28c32d5b62a9fe15aeba540708f3 478 SMART SM00382 149 293 1.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_013455 b3ad28c32d5b62a9fe15aeba540708f3 478 Gene3D G3DSA:3.40.50.2300 1 118 5.3E-7 T 14-10-2018 D172_013455 b3ad28c32d5b62a9fe15aeba540708f3 478 SUPERFAMILY SSF46689 341 475 1.66E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_013455 b3ad28c32d5b62a9fe15aeba540708f3 478 SUPERFAMILY SSF52540 129 370 1.78E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_013455 b3ad28c32d5b62a9fe15aeba540708f3 478 Pfam PF00158 Sigma-54 interaction domain 129 296 4.3E-74 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D172_013455 b3ad28c32d5b62a9fe15aeba540708f3 478 Gene3D G3DSA:1.10.8.60 301 377 3.1E-23 T 14-10-2018 D172_013455 b3ad28c32d5b62a9fe15aeba540708f3 478 Pfam PF06490 Flagellar regulatory protein FleQ 2 108 1.0E-25 T 14-10-2018 IPR010518 Flagellar regulatory FleQ D172_014980 7fae409ab028a0c176ca23ff79f98d2c 312 PIRSF PIRSF004486 1 312 1.5E-105 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 D172_014980 7fae409ab028a0c176ca23ff79f98d2c 312 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 38.562 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 D172_014980 7fae409ab028a0c176ca23ff79f98d2c 312 Gene3D G3DSA:1.10.150.170 113 215 1.7E-107 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 D172_014980 7fae409ab028a0c176ca23ff79f98d2c 312 Pfam PF01795 MraW methylase family 5 310 2.2E-113 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 D172_014980 7fae409ab028a0c176ca23ff79f98d2c 312 Gene3D G3DSA:3.40.50.150 10 310 1.7E-107 T 14-10-2018 D172_014980 7fae409ab028a0c176ca23ff79f98d2c 312 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 310 5.4E-124 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 D172_014980 7fae409ab028a0c176ca23ff79f98d2c 312 SUPERFAMILY SSF81799 115 214 3.01E-34 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 D172_014980 7fae409ab028a0c176ca23ff79f98d2c 312 SUPERFAMILY SSF53335 7 311 7.86E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_002355 1f02cac3da76bd11951e5ef671358c16 639 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 234 263 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 D172_002355 1f02cac3da76bd11951e5ef671358c16 639 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 200 639 1.2E-199 T 14-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 D172_002355 1f02cac3da76bd11951e5ef671358c16 639 SUPERFAMILY SSF51230 1 93 2.36E-22 T 14-10-2018 IPR011053 Single hybrid motif D172_002355 1f02cac3da76bd11951e5ef671358c16 639 Gene3D G3DSA:3.30.559.10 393 639 5.2E-96 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D172_002355 1f02cac3da76bd11951e5ef671358c16 639 SUPERFAMILY SSF51230 107 194 5.1E-22 T 14-10-2018 IPR011053 Single hybrid motif D172_002355 1f02cac3da76bd11951e5ef671358c16 639 SUPERFAMILY SSF47005 326 371 9.68E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 D172_002355 1f02cac3da76bd11951e5ef671358c16 639 Pfam PF02817 e3 binding domain 333 367 1.3E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 D172_002355 1f02cac3da76bd11951e5ef671358c16 639 Gene3D G3DSA:4.10.320.10 332 376 9.1E-20 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 D172_002355 1f02cac3da76bd11951e5ef671358c16 639 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 D172_002355 1f02cac3da76bd11951e5ef671358c16 639 SUPERFAMILY SSF51230 210 303 1.83E-22 T 14-10-2018 IPR011053 Single hybrid motif D172_002355 1f02cac3da76bd11951e5ef671358c16 639 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 408 638 1.7E-79 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 D172_002355 1f02cac3da76bd11951e5ef671358c16 639 SUPERFAMILY SSF52777 397 638 5.78E-81 T 14-10-2018 D172_002355 1f02cac3da76bd11951e5ef671358c16 639 Gene3D G3DSA:2.40.50.100 1 78 1.2E-21 T 14-10-2018 D172_002355 1f02cac3da76bd11951e5ef671358c16 639 Gene3D G3DSA:2.40.50.100 107 184 7.6E-21 T 14-10-2018 D172_002355 1f02cac3da76bd11951e5ef671358c16 639 Gene3D G3DSA:2.40.50.100 211 288 4.5E-21 T 14-10-2018 D172_002355 1f02cac3da76bd11951e5ef671358c16 639 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 130 159 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 D172_002355 1f02cac3da76bd11951e5ef671358c16 639 Pfam PF00364 Biotin-requiring enzyme 4 72 3.6E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment D172_002355 1f02cac3da76bd11951e5ef671358c16 639 Pfam PF00364 Biotin-requiring enzyme 108 178 7.5E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment D172_002355 1f02cac3da76bd11951e5ef671358c16 639 Pfam PF00364 Biotin-requiring enzyme 212 282 4.6E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment D172_016230 7491588a710dc0eff16a928b7a8d4c2e 168 SUPERFAMILY SSF54211 81 160 1.57E-26 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_016230 7491588a710dc0eff16a928b7a8d4c2e 168 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 12 165 1.2E-68 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 D172_016230 7491588a710dc0eff16a928b7a8d4c2e 168 ProSitePatterns PS00585 Ribosomal protein S5 signature. 30 62 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site D172_016230 7491588a710dc0eff16a928b7a8d4c2e 168 Gene3D G3DSA:3.30.230.10 76 168 3.3E-36 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D172_016230 7491588a710dc0eff16a928b7a8d4c2e 168 SUPERFAMILY SSF54768 10 78 1.88E-23 T 14-10-2018 D172_016230 7491588a710dc0eff16a928b7a8d4c2e 168 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 165 34.73 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 D172_016230 7491588a710dc0eff16a928b7a8d4c2e 168 Pfam PF03719 Ribosomal protein S5, C-terminal domain 89 159 6.9E-30 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 D172_016230 7491588a710dc0eff16a928b7a8d4c2e 168 Pfam PF00333 Ribosomal protein S5, N-terminal domain 13 76 3.2E-28 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 D172_016230 7491588a710dc0eff16a928b7a8d4c2e 168 Gene3D G3DSA:3.30.160.20 2 75 2.9E-32 T 14-10-2018 D172_013040 a87e0777765841e404cc66fa6ae4ecb8 647 SMART SM00382 186 325 9.1E-26 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_013040 a87e0777765841e404cc66fa6ae4ecb8 647 Gene3D G3DSA:1.10.8.60 325 398 1.5E-27 T 14-10-2018 D172_013040 a87e0777765841e404cc66fa6ae4ecb8 647 Gene3D G3DSA:2.40.50.920 24 102 3.5E-16 T 14-10-2018 D172_013040 a87e0777765841e404cc66fa6ae4ecb8 647 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 609 37.107 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 D172_013040 a87e0777765841e404cc66fa6ae4ecb8 647 Pfam PF01434 Peptidase family M41 384 593 8.9E-80 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 D172_013040 a87e0777765841e404cc66fa6ae4ecb8 647 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 4.6E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D172_013040 a87e0777765841e404cc66fa6ae4ecb8 647 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 102 595 9.0E-240 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 D172_013040 a87e0777765841e404cc66fa6ae4ecb8 647 SUPERFAMILY SSF140990 404 604 7.59E-73 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 D172_013040 a87e0777765841e404cc66fa6ae4ecb8 647 Pfam PF06480 FtsH Extracellular 5 99 6.4E-10 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 D172_013040 a87e0777765841e404cc66fa6ae4ecb8 647 Gene3D G3DSA:3.40.50.300 138 324 1.5E-70 T 14-10-2018 D172_013040 a87e0777765841e404cc66fa6ae4ecb8 647 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 D172_013040 a87e0777765841e404cc66fa6ae4ecb8 647 SUPERFAMILY SSF52540 146 393 1.8E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_013040 a87e0777765841e404cc66fa6ae4ecb8 647 Gene3D G3DSA:1.20.58.760 399 605 1.6E-70 T 14-10-2018 D172_010910 18b227394a158b84ae9c91fc0eef4db3 321 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 9 317 14.565 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 D172_010910 18b227394a158b84ae9c91fc0eef4db3 321 Pfam PF01628 HrcA protein C terminal domain 106 301 8.8E-6 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 D172_010910 18b227394a158b84ae9c91fc0eef4db3 321 Gene3D G3DSA:1.10.10.10 1 93 7.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_010910 18b227394a158b84ae9c91fc0eef4db3 321 Gene3D G3DSA:3.30.450.40 107 315 1.6E-5 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_010910 18b227394a158b84ae9c91fc0eef4db3 321 Gene3D G3DSA:3.30.390.60 125 223 1.6E-5 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily D172_010910 18b227394a158b84ae9c91fc0eef4db3 321 SUPERFAMILY SSF46785 9 90 2.69E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_010910 18b227394a158b84ae9c91fc0eef4db3 321 PIRSF PIRSF005485 7 319 1.3E-34 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 D172_010910 18b227394a158b84ae9c91fc0eef4db3 321 SUPERFAMILY SSF55781 99 312 5.89E-10 T 14-10-2018 D172_020955 8fc4fb0e7fc50045b2b0a105d22561f0 118 Pfam PF03992 Antibiotic biosynthesis monooxygenase 6 67 3.6E-5 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain D172_020955 8fc4fb0e7fc50045b2b0a105d22561f0 118 Gene3D G3DSA:3.30.70.100 1 89 3.7E-11 T 14-10-2018 D172_020955 8fc4fb0e7fc50045b2b0a105d22561f0 118 SUPERFAMILY SSF54909 1 82 6.97E-11 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel D172_004510 95c98a436fe27756da59389cc1ff0ae5 217 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 2.5E-59 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 D172_004510 95c98a436fe27756da59389cc1ff0ae5 217 Gene3D G3DSA:3.40.50.1360 7 207 1.3E-76 T 14-10-2018 D172_004510 95c98a436fe27756da59389cc1ff0ae5 217 Gene3D G3DSA:3.30.70.260 125 196 1.3E-76 T 14-10-2018 D172_004510 95c98a436fe27756da59389cc1ff0ae5 217 SUPERFAMILY SSF75445 127 198 6.15E-24 T 14-10-2018 D172_004510 95c98a436fe27756da59389cc1ff0ae5 217 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 5.2E-70 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 D172_004510 95c98a436fe27756da59389cc1ff0ae5 217 SUPERFAMILY SSF100950 1 146 3.81E-48 T 14-10-2018 IPR037171 NagB/RpiA transferase-like D172_004510 95c98a436fe27756da59389cc1ff0ae5 217 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.708 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 D172_005070 3a8b58de1f46011cf68e6dedc5d11d9b 753 PIRSF PIRSF036389 1 753 8.1E-228 T 14-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related D172_005070 3a8b58de1f46011cf68e6dedc5d11d9b 753 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 34 3.4E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal D172_005070 3a8b58de1f46011cf68e6dedc5d11d9b 753 Gene3D G3DSA:3.30.365.10 46 178 1.3E-20 T 14-10-2018 D172_005070 3a8b58de1f46011cf68e6dedc5d11d9b 753 Gene3D G3DSA:3.30.365.10 604 751 6.7E-37 T 14-10-2018 D172_005070 3a8b58de1f46011cf68e6dedc5d11d9b 753 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 321 556 6.1E-30 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 D172_005070 3a8b58de1f46011cf68e6dedc5d11d9b 753 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 47 191 6.6E-15 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 D172_005070 3a8b58de1f46011cf68e6dedc5d11d9b 753 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 618 701 3.7E-15 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 D172_005070 3a8b58de1f46011cf68e6dedc5d11d9b 753 Gene3D G3DSA:3.30.365.10 352 443 1.8E-47 T 14-10-2018 D172_005070 3a8b58de1f46011cf68e6dedc5d11d9b 753 SUPERFAMILY SSF56003 24 244 1.67E-33 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 D172_005070 3a8b58de1f46011cf68e6dedc5d11d9b 753 Gene3D G3DSA:3.90.1170.50 181 292 5.8E-8 T 14-10-2018 D172_005070 3a8b58de1f46011cf68e6dedc5d11d9b 753 Gene3D G3DSA:3.30.365.10 328 548 1.8E-47 T 14-10-2018 D172_005070 3a8b58de1f46011cf68e6dedc5d11d9b 753 SMART SM01008 211 300 7.5E-16 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead D172_005070 3a8b58de1f46011cf68e6dedc5d11d9b 753 SUPERFAMILY SSF56003 324 747 5.1E-109 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 D172_005080 c48c8654d9f77f13d31b71fb259a2d02 808 SMART SM00487 2 182 5.9E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_005080 c48c8654d9f77f13d31b71fb259a2d02 808 SMART SM00490 222 323 1.9E-13 T 14-10-2018 IPR001650 Helicase, C-terminal D172_005080 c48c8654d9f77f13d31b71fb259a2d02 808 Gene3D G3DSA:3.40.50.300 1 175 1.7E-49 T 14-10-2018 D172_005080 c48c8654d9f77f13d31b71fb259a2d02 808 Gene3D G3DSA:3.40.50.300 176 341 9.6E-47 T 14-10-2018 D172_005080 c48c8654d9f77f13d31b71fb259a2d02 808 Pfam PF00271 Helicase conserved C-terminal domain 200 322 8.6E-12 T 14-10-2018 IPR001650 Helicase, C-terminal D172_005080 c48c8654d9f77f13d31b71fb259a2d02 808 SMART SM00847 382 492 2.4E-12 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 D172_005080 c48c8654d9f77f13d31b71fb259a2d02 808 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 2 807 2.6E-271 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 D172_005080 c48c8654d9f77f13d31b71fb259a2d02 808 Pfam PF00270 DEAD/DEAH box helicase 10 159 1.8E-7 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D172_005080 c48c8654d9f77f13d31b71fb259a2d02 808 Pfam PF04408 Helicase associated domain (HA2) 383 453 1.4E-10 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 D172_005080 c48c8654d9f77f13d31b71fb259a2d02 808 Gene3D G3DSA:1.20.120.1080 365 463 6.2E-9 T 14-10-2018 D172_005080 c48c8654d9f77f13d31b71fb259a2d02 808 Pfam PF08482 ATP-dependent helicase C-terminal 663 795 1.6E-49 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal D172_005080 c48c8654d9f77f13d31b71fb259a2d02 808 SUPERFAMILY SSF52540 15 333 7.12E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_005080 c48c8654d9f77f13d31b71fb259a2d02 808 PIRSF PIRSF005496 1 808 3.1E-266 T 14-10-2018 D172_008785 8eecaf08282099ac559e714574741d51 276 Gene3D G3DSA:1.10.3720.10 1 268 2.9E-53 T 14-10-2018 IPR035906 MetI-like superfamily D172_008785 8eecaf08282099ac559e714574741d51 276 SUPERFAMILY SSF161098 4 276 6.0E-63 T 14-10-2018 IPR035906 MetI-like superfamily D172_008785 8eecaf08282099ac559e714574741d51 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 261 2.6E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D172_003835 94efd4c4f201b7663ba6398ad313462a 347 Pfam PF01757 Acyltransferase family 8 333 1.5E-26 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 D172_017725 224c69e3c123436cda550b387c9d7d62 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 14-10-2018 D172_017725 224c69e3c123436cda550b387c9d7d62 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 2.6E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_017725 224c69e3c123436cda550b387c9d7d62 335 Gene3D G3DSA:1.10.260.40 1 63 6.3E-17 T 14-10-2018 D172_017725 224c69e3c123436cda550b387c9d7d62 335 SUPERFAMILY SSF47413 4 64 3.58E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D172_017725 224c69e3c123436cda550b387c9d7d62 335 Gene3D G3DSA:3.40.50.2300 168 331 9.0E-62 T 14-10-2018 D172_017725 224c69e3c123436cda550b387c9d7d62 335 Pfam PF08659 KR domain 162 260 5.3E-5 T 14-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 D172_017725 224c69e3c123436cda550b387c9d7d62 335 SMART SM00354 5 75 6.5E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_017725 224c69e3c123436cda550b387c9d7d62 335 Gene3D G3DSA:3.40.50.2300 82 325 9.0E-62 T 14-10-2018 D172_017725 224c69e3c123436cda550b387c9d7d62 335 SUPERFAMILY SSF53822 62 322 1.28E-53 T 14-10-2018 IPR028082 Periplasmic binding protein-like I D172_017725 224c69e3c123436cda550b387c9d7d62 335 Pfam PF13377 Periplasmic binding protein-like domain 178 333 3.8E-32 T 14-10-2018 D172_006795 22105c92749a8408ff2d9d937a3c976e 1099 Gene3D G3DSA:1.10.486.10 448 656 2.3E-163 T 14-10-2018 D172_006795 22105c92749a8408ff2d9d937a3c976e 1099 PIRSF PIRSF000980 1 1099 6.4E-302 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 D172_006795 22105c92749a8408ff2d9d937a3c976e 1099 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 788 5.4E-263 T 14-10-2018 D172_006795 22105c92749a8408ff2d9d937a3c976e 1099 Gene3D G3DSA:1.10.10.990 853 921 1.4E-7 T 14-10-2018 D172_006795 22105c92749a8408ff2d9d937a3c976e 1099 SUPERFAMILY SSF52980 813 1090 2.79E-62 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 D172_006795 22105c92749a8408ff2d9d937a3c976e 1099 SUPERFAMILY SSF52540 1 336 2.5E-103 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006795 22105c92749a8408ff2d9d937a3c976e 1099 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 3 1053 5.0E-296 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 D172_006795 22105c92749a8408ff2d9d937a3c976e 1099 Gene3D G3DSA:1.10.10.160 79 189 1.4E-105 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily D172_006795 22105c92749a8408ff2d9d937a3c976e 1099 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1094 18.738 T 14-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 D172_006795 22105c92749a8408ff2d9d937a3c976e 1099 Gene3D G3DSA:3.40.50.300 325 800 2.3E-163 T 14-10-2018 D172_006795 22105c92749a8408ff2d9d937a3c976e 1099 SUPERFAMILY SSF52540 354 784 5.84E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006795 22105c92749a8408ff2d9d937a3c976e 1099 Gene3D G3DSA:3.40.50.10930 4 307 1.4E-105 T 14-10-2018 D172_009215 9726278b6119fed1ef9a6fec166340a7 376 SUPERFAMILY SSF47240 3 340 1.25E-112 T 14-10-2018 IPR009078 Ferritin-like superfamily D172_009215 9726278b6119fed1ef9a6fec166340a7 376 Gene3D G3DSA:1.10.620.20 2 340 1.7E-140 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 D172_009215 9726278b6119fed1ef9a6fec166340a7 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 7.4E-49 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 D172_011675 38bf6378a5de175d1f4886d416b6ad86 128 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 D172_011675 38bf6378a5de175d1f4886d416b6ad86 128 SUPERFAMILY SSF54593 1 126 2.82E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_011675 38bf6378a5de175d1f4886d416b6ad86 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 9.3E-24 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D172_011675 38bf6378a5de175d1f4886d416b6ad86 128 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 127 1.2E-63 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 D172_011675 38bf6378a5de175d1f4886d416b6ad86 128 Gene3D G3DSA:3.10.180.10 1 128 3.7E-49 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_011675 38bf6378a5de175d1f4886d416b6ad86 128 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 D172_008925 663788b43550db03946167d43882116b 140 Gene3D G3DSA:2.40.70.10 3 139 1.3E-19 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily D172_008925 663788b43550db03946167d43882116b 140 Pfam PF13650 Aspartyl protease 22 118 1.7E-11 T 14-10-2018 D172_008925 663788b43550db03946167d43882116b 140 SUPERFAMILY SSF50630 12 128 8.94E-11 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily D172_008780 fd6bb407cce1e795ebfea6b140d2b08e 333 SUPERFAMILY SSF50331 236 329 1.14E-20 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal D172_008780 fd6bb407cce1e795ebfea6b140d2b08e 333 Gene3D G3DSA:3.40.50.300 3 221 2.8E-64 T 14-10-2018 D172_008780 fd6bb407cce1e795ebfea6b140d2b08e 333 SMART SM00382 28 217 1.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_008780 fd6bb407cce1e795ebfea6b140d2b08e 333 SUPERFAMILY SSF52540 4 243 3.41E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_008780 fd6bb407cce1e795ebfea6b140d2b08e 333 Pfam PF08402 TOBE domain 255 323 7.7E-11 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 D172_008780 fd6bb407cce1e795ebfea6b140d2b08e 333 Pfam PF00005 ABC transporter 20 161 3.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_008780 fd6bb407cce1e795ebfea6b140d2b08e 333 Gene3D G3DSA:2.40.50.140 258 318 1.2E-5 T 14-10-2018 D172_008780 fd6bb407cce1e795ebfea6b140d2b08e 333 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_008780 fd6bb407cce1e795ebfea6b140d2b08e 333 Gene3D G3DSA:2.40.50.940 222 254 2.6E-12 T 14-10-2018 D172_019105 bab08d0c20211aa73884fe0e0d002ec0 312 Gene3D G3DSA:3.40.190.10 92 290 2.4E-51 T 14-10-2018 D172_019105 bab08d0c20211aa73884fe0e0d002ec0 312 SUPERFAMILY SSF53850 89 296 2.28E-37 T 14-10-2018 D172_019105 bab08d0c20211aa73884fe0e0d002ec0 312 Pfam PF03466 LysR substrate binding domain 89 294 1.9E-35 T 14-10-2018 IPR005119 LysR, substrate-binding D172_019105 bab08d0c20211aa73884fe0e0d002ec0 312 Gene3D G3DSA:3.40.190.10 163 266 2.4E-51 T 14-10-2018 D172_019105 bab08d0c20211aa73884fe0e0d002ec0 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.1E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_019105 bab08d0c20211aa73884fe0e0d002ec0 312 Gene3D G3DSA:1.10.10.10 3 91 8.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_019105 bab08d0c20211aa73884fe0e0d002ec0 312 SUPERFAMILY SSF46785 5 86 9.79E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_009565 f9dbd7e21c056f352ed9f026d88a43aa 606 Gene3D G3DSA:3.40.630.10 41 335 5.3E-38 T 14-10-2018 D172_009565 f9dbd7e21c056f352ed9f026d88a43aa 606 SUPERFAMILY SSF53187 51 318 9.92E-48 T 14-10-2018 D172_009565 f9dbd7e21c056f352ed9f026d88a43aa 606 Pfam PF00246 Zinc carboxypeptidase 58 239 7.8E-24 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 D172_009565 f9dbd7e21c056f352ed9f026d88a43aa 606 SMART SM00631 51 300 1.2E-5 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 D172_016660 b66eb20bde2564ad7707b652faad5ea9 188 Pfam PF03358 NADPH-dependent FMN reductase 4 153 6.9E-39 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 D172_016660 b66eb20bde2564ad7707b652faad5ea9 188 SUPERFAMILY SSF52218 4 182 2.97E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_016660 b66eb20bde2564ad7707b652faad5ea9 188 Gene3D G3DSA:3.40.50.360 1 188 1.7E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_016755 5305f2027245fbe5e2bb9c2386a8e784 640 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_016755 5305f2027245fbe5e2bb9c2386a8e784 640 Gene3D G3DSA:3.40.50.300 7 274 3.2E-57 T 14-10-2018 D172_016755 5305f2027245fbe5e2bb9c2386a8e784 640 SMART SM00382 26 223 4.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_016755 5305f2027245fbe5e2bb9c2386a8e784 640 SMART SM00382 337 493 8.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_016755 5305f2027245fbe5e2bb9c2386a8e784 640 Pfam PF12848 ABC transporter 217 298 1.1E-28 T 14-10-2018 IPR032781 ABC-transporter extension domain D172_016755 5305f2027245fbe5e2bb9c2386a8e784 640 Pfam PF00005 ABC transporter 328 459 2.9E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_016755 5305f2027245fbe5e2bb9c2386a8e784 640 Gene3D G3DSA:3.40.50.300 275 538 5.1E-54 T 14-10-2018 D172_016755 5305f2027245fbe5e2bb9c2386a8e784 640 SUPERFAMILY SSF52540 2 256 5.97E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_016755 5305f2027245fbe5e2bb9c2386a8e784 640 SUPERFAMILY SSF52540 294 515 2.5E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_016755 5305f2027245fbe5e2bb9c2386a8e784 640 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_016755 5305f2027245fbe5e2bb9c2386a8e784 640 Pfam PF00005 ABC transporter 17 178 7.2E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_014840 1c2cc5e2cfce0d730822b8c2f40b4f48 377 SUPERFAMILY SSF54862 171 319 7.53E-17 T 14-10-2018 D172_014840 1c2cc5e2cfce0d730822b8c2f40b4f48 377 Pfam PF13484 4Fe-4S double cluster binding domain 195 258 2.1E-19 T 14-10-2018 D172_014840 1c2cc5e2cfce0d730822b8c2f40b4f48 377 Gene3D G3DSA:3.30.70.20 200 263 1.5E-5 T 14-10-2018 D172_014840 1c2cc5e2cfce0d730822b8c2f40b4f48 377 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 8 317 50.678 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 D172_014840 1c2cc5e2cfce0d730822b8c2f40b4f48 377 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 195 206 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D172_014840 1c2cc5e2cfce0d730822b8c2f40b4f48 377 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 15 351 1.2E-153 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 D172_014840 1c2cc5e2cfce0d730822b8c2f40b4f48 377 Pfam PF08331 Domain of unknown function (DUF1730) 63 141 4.3E-25 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 D172_001075 af425cd0d6b933c915486afbd77702d0 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001075 af425cd0d6b933c915486afbd77702d0 137 Gene3D G3DSA:3.90.1170.10 1 137 1.8E-57 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 D172_001075 af425cd0d6b933c915486afbd77702d0 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.1E-60 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001075 af425cd0d6b933c915486afbd77702d0 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001075 af425cd0d6b933c915486afbd77702d0 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 9.0E-50 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 D172_001075 af425cd0d6b933c915486afbd77702d0 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 3.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001075 af425cd0d6b933c915486afbd77702d0 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 3.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001075 af425cd0d6b933c915486afbd77702d0 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 3.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001075 af425cd0d6b933c915486afbd77702d0 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 3.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001075 af425cd0d6b933c915486afbd77702d0 137 SUPERFAMILY SSF54686 1 134 6.54E-56 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 D172_001075 af425cd0d6b933c915486afbd77702d0 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.783 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_017355 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 SUPERFAMILY SSF46689 5 96 9.5E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_017355 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 Gene3D G3DSA:1.10.10.60 10 91 1.4E-6 T 14-10-2018 D172_017355 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 Pfam PF01527 Transposase 5 77 1.7E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_012495 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 SUPERFAMILY SSF46689 5 96 9.5E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_012495 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 Gene3D G3DSA:1.10.10.60 10 91 1.4E-6 T 14-10-2018 D172_012495 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 Pfam PF01527 Transposase 5 77 1.7E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_004360 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 SUPERFAMILY SSF46689 5 96 9.5E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_004360 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 Gene3D G3DSA:1.10.10.60 10 91 1.4E-6 T 14-10-2018 D172_004360 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 Pfam PF01527 Transposase 5 77 1.7E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_018115 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 SUPERFAMILY SSF46689 5 96 9.5E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_018115 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 Gene3D G3DSA:1.10.10.60 10 91 1.4E-6 T 14-10-2018 D172_018115 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 Pfam PF01527 Transposase 5 77 1.7E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_017000 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 SUPERFAMILY SSF46689 5 96 9.5E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_017000 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 Gene3D G3DSA:1.10.10.60 10 91 1.4E-6 T 14-10-2018 D172_017000 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 Pfam PF01527 Transposase 5 77 1.7E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_003240 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 SUPERFAMILY SSF46689 5 96 9.5E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_003240 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 Gene3D G3DSA:1.10.10.60 10 91 1.4E-6 T 14-10-2018 D172_003240 1f738fd4b1bbffe68f7f9f7d3fcaf12a 103 Pfam PF01527 Transposase 5 77 1.7E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_012425 34eed2863df09c117f0a142b54f0148a 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 4.0E-18 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal D172_012425 34eed2863df09c117f0a142b54f0148a 151 Gene3D G3DSA:3.30.300.70 1 80 9.0E-24 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily D172_012425 34eed2863df09c117f0a142b54f0148a 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 23.189 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 D172_012425 34eed2863df09c117f0a142b54f0148a 151 SUPERFAMILY SSF75420 2 83 6.93E-25 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily D172_012425 34eed2863df09c117f0a142b54f0148a 151 Gene3D G3DSA:2.30.30.180 88 147 1.8E-5 T 14-10-2018 D172_012425 34eed2863df09c117f0a142b54f0148a 151 Pfam PF02576 RimP N-terminal domain 12 83 7.9E-28 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal D172_012425 34eed2863df09c117f0a142b54f0148a 151 SUPERFAMILY SSF74942 84 151 1.7E-15 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily D172_020535 5edd92e34a3a5d3aa3a61a18ba307902 533 SUPERFAMILY SSF51621 15 518 6.28E-118 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D172_020535 5edd92e34a3a5d3aa3a61a18ba307902 533 PIRSF PIRSF001362 424 533 0.012 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 D172_020535 5edd92e34a3a5d3aa3a61a18ba307902 533 PIRSF PIRSF001362 1 274 1.2E-32 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 D172_020535 5edd92e34a3a5d3aa3a61a18ba307902 533 PIRSF PIRSF001362 296 407 2.0E-11 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 D172_020535 5edd92e34a3a5d3aa3a61a18ba307902 533 Pfam PF00463 Isocitrate lyase family 446 533 3.4E-8 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 D172_020535 5edd92e34a3a5d3aa3a61a18ba307902 533 Pfam PF00463 Isocitrate lyase family 95 268 1.3E-22 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 D172_020535 5edd92e34a3a5d3aa3a61a18ba307902 533 Pfam PF00463 Isocitrate lyase family 316 389 5.2E-11 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 D172_007230 b2c4a3f27b40129977d52672ab41f067 571 Gene3D G3DSA:3.40.50.2300 2 137 1.8E-28 T 14-10-2018 D172_007230 b2c4a3f27b40129977d52672ab41f067 571 Gene3D G3DSA:3.30.70.270 138 314 2.7E-56 T 14-10-2018 D172_007230 b2c4a3f27b40129977d52672ab41f067 571 SMART SM00267 129 303 1.1E-54 T 14-10-2018 IPR000160 GGDEF domain D172_007230 b2c4a3f27b40129977d52672ab41f067 571 Pfam PF00072 Response regulator receiver domain 3 114 1.6E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_007230 b2c4a3f27b40129977d52672ab41f067 571 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 139 301 7.5E-42 T 14-10-2018 IPR000160 GGDEF domain D172_007230 b2c4a3f27b40129977d52672ab41f067 571 SUPERFAMILY SSF141868 319 564 7.06E-75 T 14-10-2018 IPR035919 EAL domain superfamily D172_007230 b2c4a3f27b40129977d52672ab41f067 571 SMART SM00448 1 118 4.3E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_007230 b2c4a3f27b40129977d52672ab41f067 571 SUPERFAMILY SSF55073 147 305 5.96E-48 T 14-10-2018 IPR029787 Nucleotide cyclase D172_007230 b2c4a3f27b40129977d52672ab41f067 571 SMART SM00052 313 558 3.0E-78 T 14-10-2018 IPR001633 EAL domain D172_007230 b2c4a3f27b40129977d52672ab41f067 571 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 298 2.2E-45 T 14-10-2018 IPR000160 GGDEF domain D172_007230 b2c4a3f27b40129977d52672ab41f067 571 SUPERFAMILY SSF52172 2 137 3.84E-27 T 14-10-2018 IPR011006 CheY-like superfamily D172_007230 b2c4a3f27b40129977d52672ab41f067 571 Pfam PF00563 EAL domain 319 553 8.2E-65 T 14-10-2018 IPR001633 EAL domain D172_007230 b2c4a3f27b40129977d52672ab41f067 571 Gene3D G3DSA:3.20.20.450 315 570 2.8E-81 T 14-10-2018 IPR035919 EAL domain superfamily D172_005930 7ff212b8c074d354a6f2b4d97f40ba77 262 Pfam PF11185 Protein of unknown function (DUF2971) 115 190 9.8E-10 T 14-10-2018 IPR021352 Protein of unknown function DUF2971 D172_006210 5229244134ec75a27d8c898c92fb3b6a 215 Pfam PF00551 Formyl transferase 5 184 6.6E-65 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D172_006210 5229244134ec75a27d8c898c92fb3b6a 215 SUPERFAMILY SSF53328 5 207 1.96E-66 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D172_006210 5229244134ec75a27d8c898c92fb3b6a 215 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 5 190 32.731 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 D172_006210 5229244134ec75a27d8c898c92fb3b6a 215 Gene3D G3DSA:3.40.50.170 4 214 9.7E-88 T 14-10-2018 D172_006210 5229244134ec75a27d8c898c92fb3b6a 215 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 D172_006210 5229244134ec75a27d8c898c92fb3b6a 215 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 5 194 1.5E-80 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 D172_011530 e6bc04e83b451c75aa8760ab4d59475f 210 Hamap MF_00942 Endonuclease III [nth]. 1 209 36.492 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 D172_011530 e6bc04e83b451c75aa8760ab4d59475f 210 SUPERFAMILY SSF48150 2 208 6.44E-71 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 D172_011530 e6bc04e83b451c75aa8760ab4d59475f 210 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 D172_011530 e6bc04e83b451c75aa8760ab4d59475f 210 SMART SM00525 186 206 2.6E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 D172_011530 e6bc04e83b451c75aa8760ab4d59475f 210 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.2E-85 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 D172_011530 e6bc04e83b451c75aa8760ab4d59475f 210 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 D172_011530 e6bc04e83b451c75aa8760ab4d59475f 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 8.6E-18 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 D172_011530 e6bc04e83b451c75aa8760ab4d59475f 210 Gene3D G3DSA:1.10.1670.10 11 203 1.2E-75 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 D172_011530 e6bc04e83b451c75aa8760ab4d59475f 210 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 2.4E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 D172_011530 e6bc04e83b451c75aa8760ab4d59475f 210 Gene3D G3DSA:1.10.340.30 21 132 1.2E-75 T 14-10-2018 D172_011530 e6bc04e83b451c75aa8760ab4d59475f 210 SMART SM00478 38 185 1.4E-50 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 D172_011530 e6bc04e83b451c75aa8760ab4d59475f 210 PIRSF PIRSF001435 1 210 2.8E-48 T 14-10-2018 D172_011530 e6bc04e83b451c75aa8760ab4d59475f 210 Pfam PF00633 Helix-hairpin-helix motif 100 127 5.9E-8 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 D172_000765 b9e989eebc5d3e37fe132285a0ebec02 107 Pfam PF01491 Frataxin-like domain 1 101 1.2E-24 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D172_000765 b9e989eebc5d3e37fe132285a0ebec02 107 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 3.5E-38 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D172_000765 b9e989eebc5d3e37fe132285a0ebec02 107 Gene3D G3DSA:3.30.920.10 1 105 1.2E-34 T 14-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D172_000765 b9e989eebc5d3e37fe132285a0ebec02 107 SUPERFAMILY SSF55387 1 101 6.1E-34 T 14-10-2018 D172_000765 b9e989eebc5d3e37fe132285a0ebec02 107 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 14-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D172_000765 b9e989eebc5d3e37fe132285a0ebec02 107 SMART SM01219 1 104 6.0E-48 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D172_000765 b9e989eebc5d3e37fe132285a0ebec02 107 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 25.674 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 D172_015660 dcbebf1847bfc834355bf83920aad2e1 864 SUPERFAMILY SSF56399 667 847 1.04E-15 T 14-10-2018 D172_015660 dcbebf1847bfc834355bf83920aad2e1 864 Pfam PF01129 NAD:arginine ADP-ribosyltransferase 700 848 3.1E-8 T 14-10-2018 IPR000768 NAD:arginine ADP-ribosyltransferase, ART GO:0003956|GO:0006471 D172_015660 dcbebf1847bfc834355bf83920aad2e1 864 Gene3D G3DSA:3.90.176.10 674 852 4.2E-27 T 14-10-2018 D172_020920 97131c435835e2099247b0ccc4451837 342 SUPERFAMILY SSF50129 3 143 8.57E-44 T 14-10-2018 IPR011032 GroES-like superfamily D172_020920 97131c435835e2099247b0ccc4451837 342 Gene3D G3DSA:3.40.50.720 127 308 1.6E-130 T 14-10-2018 D172_020920 97131c435835e2099247b0ccc4451837 342 Gene3D G3DSA:3.90.180.10 16 336 1.6E-130 T 14-10-2018 D172_020920 97131c435835e2099247b0ccc4451837 342 Pfam PF00107 Zinc-binding dehydrogenase 158 298 2.7E-22 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D172_020920 97131c435835e2099247b0ccc4451837 342 SUPERFAMILY SSF51735 123 304 6.17E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_020920 97131c435835e2099247b0ccc4451837 342 Pfam PF16884 N-terminal domain of oxidoreductase 6 112 2.6E-44 T 14-10-2018 D172_020920 97131c435835e2099247b0ccc4451837 342 SMART SM00829 19 336 6.6E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D172_013360 feb2addfe7724a8f789a1b106ef1b6ad 703 PIRSF PIRSF005419 5 703 2.2E-244 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 D172_013360 feb2addfe7724a8f789a1b106ef1b6ad 703 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 160 178 1.5E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 D172_013360 feb2addfe7724a8f789a1b106ef1b6ad 703 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 74 93 1.5E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 D172_013360 feb2addfe7724a8f789a1b106ef1b6ad 703 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 190 207 1.5E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 D172_013360 feb2addfe7724a8f789a1b106ef1b6ad 703 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 37 50 1.5E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 D172_013360 feb2addfe7724a8f789a1b106ef1b6ad 703 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 141 157 1.5E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 D172_013360 feb2addfe7724a8f789a1b106ef1b6ad 703 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 241 255 1.5E-55 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 D172_013360 feb2addfe7724a8f789a1b106ef1b6ad 703 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 23 700 7.7E-259 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 D172_013360 feb2addfe7724a8f789a1b106ef1b6ad 703 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 146 169 - T 14-10-2018 IPR025505 FHIPEP conserved site D172_013360 feb2addfe7724a8f789a1b106ef1b6ad 703 Gene3D G3DSA:3.40.30.60 368 510 1.2E-51 T 14-10-2018 D172_013360 feb2addfe7724a8f789a1b106ef1b6ad 703 Gene3D G3DSA:1.10.8.540 511 599 1.5E-25 T 14-10-2018 D172_013360 feb2addfe7724a8f789a1b106ef1b6ad 703 Gene3D G3DSA:1.10.490.80 603 700 3.2E-12 T 14-10-2018 D172_013360 feb2addfe7724a8f789a1b106ef1b6ad 703 Pfam PF00771 FHIPEP family 31 692 1.6E-265 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 D172_014535 abe28bc49edc94d365b8427f4fb8a3e0 194 Pfam PF09335 SNARE associated Golgi protein 53 159 3.5E-16 T 14-10-2018 IPR032816 SNARE associated Golgi protein D172_007690 9ce51b35fbabf7723947e40a86f506e4 346 Gene3D G3DSA:2.60.120.200 32 340 8.6E-51 T 14-10-2018 D172_007690 9ce51b35fbabf7723947e40a86f506e4 346 Pfam PF00722 Glycosyl hydrolases family 16 148 273 2.3E-15 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 D172_007690 9ce51b35fbabf7723947e40a86f506e4 346 SUPERFAMILY SSF49899 44 339 1.27E-43 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D172_019005 0db35b1d1214ea91593baa42b17b4556 271 Gene3D G3DSA:3.10.129.90 11 270 1.2E-74 T 14-10-2018 D172_019005 0db35b1d1214ea91593baa42b17b4556 271 Pfam PF13622 Thioesterase-like superfamily 29 268 8.5E-50 T 14-10-2018 D172_019005 0db35b1d1214ea91593baa42b17b4556 271 SUPERFAMILY SSF54637 25 117 2.1E-23 T 14-10-2018 IPR029069 HotDog domain superfamily D172_019005 0db35b1d1214ea91593baa42b17b4556 271 SUPERFAMILY SSF54637 137 268 8.95E-23 T 14-10-2018 IPR029069 HotDog domain superfamily D172_007260 6b191389ca441300442de42996bf4145 714 SUPERFAMILY SSF50475 219 277 9.16E-5 T 14-10-2018 D172_007260 6b191389ca441300442de42996bf4145 714 Pfam PF00970 Oxidoreductase FAD-binding domain 342 442 3.6E-10 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 D172_007260 6b191389ca441300442de42996bf4145 714 SUPERFAMILY SSF54292 629 706 1.7E-15 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D172_007260 6b191389ca441300442de42996bf4145 714 SUPERFAMILY SSF63380 336 445 2.04E-23 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D172_007260 6b191389ca441300442de42996bf4145 714 Gene3D G3DSA:3.40.50.80 444 606 3.4E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D172_007260 6b191389ca441300442de42996bf4145 714 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 637 703 9.3E-11 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 D172_007260 6b191389ca441300442de42996bf4145 714 Pfam PF00175 Oxidoreductase NAD-binding domain 454 580 1.9E-10 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D172_007260 6b191389ca441300442de42996bf4145 714 SUPERFAMILY SSF52343 433 597 2.75E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D172_007260 6b191389ca441300442de42996bf4145 714 Gene3D G3DSA:3.10.20.30 618 713 4.5E-16 T 14-10-2018 IPR012675 Beta-grasp domain superfamily D172_007260 6b191389ca441300442de42996bf4145 714 Gene3D G3DSA:2.30.110.10 168 288 8.5E-7 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 D172_007260 6b191389ca441300442de42996bf4145 714 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 207 276 1.7E-8 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D172_007260 6b191389ca441300442de42996bf4145 714 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 664 672 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 D172_007260 6b191389ca441300442de42996bf4145 714 Gene3D G3DSA:2.40.30.10 337 443 2.1E-27 T 14-10-2018 D172_007260 6b191389ca441300442de42996bf4145 714 PRINTS PR00409 Phthalate dioxygenase reductase family signature 453 472 3.0E-7 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 D172_007260 6b191389ca441300442de42996bf4145 714 PRINTS PR00409 Phthalate dioxygenase reductase family signature 364 374 3.0E-7 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 D172_018070 f32d77e6a3883e6f1d89a2313f619e31 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 D172_018070 f32d77e6a3883e6f1d89a2313f619e31 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 D172_018070 f32d77e6a3883e6f1d89a2313f619e31 506 Gene3D G3DSA:3.40.309.10 266 464 3.7E-163 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D172_018070 f32d77e6a3883e6f1d89a2313f619e31 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 1.3E-165 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D172_018070 f32d77e6a3883e6f1d89a2313f619e31 506 Gene3D G3DSA:3.40.605.10 23 492 3.7E-163 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D172_018070 f32d77e6a3883e6f1d89a2313f619e31 506 SUPERFAMILY SSF53720 14 498 1.31E-162 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D172_018015 0938f2aee801ae0810ef5d82a0c8fe9d 126 Pfam PF11964 SpoIIAA-like 22 124 2.1E-16 T 14-10-2018 IPR021866 SpoIIAA-like D172_018015 0938f2aee801ae0810ef5d82a0c8fe9d 126 Gene3D G3DSA:3.40.50.10600 2 125 5.9E-46 T 14-10-2018 IPR038396 SpoIIAA-like superfamily D172_018015 0938f2aee801ae0810ef5d82a0c8fe9d 126 SUPERFAMILY SSF52091 1 124 3.26E-37 T 14-10-2018 IPR036513 STAS domain superfamily D172_003155 6f10036c0c4173902017d7545265b97f 254 SUPERFAMILY SSF69572 4 254 8.5E-78 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 D172_003155 6f10036c0c4173902017d7545265b97f 254 Gene3D G3DSA:3.40.50.720 9 254 3.8E-82 T 14-10-2018 D172_003155 6f10036c0c4173902017d7545265b97f 254 Pfam PF00899 ThiF family 17 250 5.9E-60 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 D172_010075 ff658050e90f76ac5fdd343c58fbc43b 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_010075 ff658050e90f76ac5fdd343c58fbc43b 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_010075 ff658050e90f76ac5fdd343c58fbc43b 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_010075 ff658050e90f76ac5fdd343c58fbc43b 315 Gene3D G3DSA:1.10.10.10 1 87 7.3E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_010075 ff658050e90f76ac5fdd343c58fbc43b 315 SUPERFAMILY SSF46785 2 85 8.58E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_010075 ff658050e90f76ac5fdd343c58fbc43b 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.5E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_010075 ff658050e90f76ac5fdd343c58fbc43b 315 Gene3D G3DSA:3.40.190.10 170 280 1.5E-51 T 14-10-2018 D172_010075 ff658050e90f76ac5fdd343c58fbc43b 315 Pfam PF03466 LysR substrate binding domain 98 307 2.5E-12 T 14-10-2018 IPR005119 LysR, substrate-binding D172_010075 ff658050e90f76ac5fdd343c58fbc43b 315 Gene3D G3DSA:3.40.190.10 90 303 1.5E-51 T 14-10-2018 D172_010075 ff658050e90f76ac5fdd343c58fbc43b 315 SUPERFAMILY SSF53850 90 307 5.84E-30 T 14-10-2018 D172_016630 88e3c16a95eb35a6bb999283eda6f9d6 903 SUPERFAMILY SSF56935 42 902 4.27E-85 T 14-10-2018 D172_016630 88e3c16a95eb35a6bb999283eda6f9d6 903 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 46 902 5.8E-203 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_016630 88e3c16a95eb35a6bb999283eda6f9d6 903 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 175 2.7E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_016630 88e3c16a95eb35a6bb999283eda6f9d6 903 Gene3D G3DSA:2.170.130.10 34 180 2.1E-17 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_016630 88e3c16a95eb35a6bb999283eda6f9d6 903 Gene3D G3DSA:2.40.170.20 295 903 4.2E-42 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_016630 88e3c16a95eb35a6bb999283eda6f9d6 903 Pfam PF00593 TonB dependent receptor 427 902 2.6E-35 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_014545 267413d8b842dd143eca454cf4a36694 311 Gene3D G3DSA:1.10.238.10 177 289 1.4E-7 T 14-10-2018 D172_014545 267413d8b842dd143eca454cf4a36694 311 SUPERFAMILY SSF47473 28 134 3.54E-10 T 14-10-2018 IPR011992 EF-hand domain pair D172_014545 267413d8b842dd143eca454cf4a36694 311 ProSitePatterns PS00018 EF-hand calcium-binding domain. 59 71 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_014545 267413d8b842dd143eca454cf4a36694 311 Gene3D G3DSA:1.10.238.10 27 137 3.7E-7 T 14-10-2018 D172_014545 267413d8b842dd143eca454cf4a36694 311 ProSitePatterns PS00018 EF-hand calcium-binding domain. 187 199 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_014545 267413d8b842dd143eca454cf4a36694 311 ProSitePatterns PS00018 EF-hand calcium-binding domain. 254 266 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_014545 267413d8b842dd143eca454cf4a36694 311 SUPERFAMILY SSF47473 180 286 1.59E-10 T 14-10-2018 IPR011992 EF-hand domain pair D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 Gene3D G3DSA:3.30.2090.10 723 811 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 14-10-2018 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 SUPERFAMILY SSF82693 135 330 1.92E-27 T 14-10-2018 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 Gene3D G3DSA:3.30.70.1430 38 819 0.0 T 14-10-2018 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1039 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 SUPERFAMILY SSF82693 567 671 3.77E-30 T 14-10-2018 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 Gene3D G3DSA:3.30.70.1430 569 670 0.0 T 14-10-2018 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 Gene3D G3DSA:1.20.1640.10 8 514 0.0 T 14-10-2018 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 Gene3D G3DSA:1.20.1640.10 515 1024 0.0 T 14-10-2018 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 Gene3D G3DSA:3.30.70.1440 671 867 0.0 T 14-10-2018 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.6E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 1.6E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 1.6E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.6E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.6E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.6E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.6E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.6E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.6E-112 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 SUPERFAMILY SSF82866 833 1028 1.44E-40 T 14-10-2018 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 SUPERFAMILY SSF82693 38 131 2.88E-26 T 14-10-2018 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 SUPERFAMILY SSF82866 296 497 1.26E-47 T 14-10-2018 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 SUPERFAMILY SSF82714 724 810 3.14E-21 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 SUPERFAMILY SSF82693 674 858 5.75E-30 T 14-10-2018 D172_018880 e8148a9de6cc0911b406e2fd7277230a 1044 SUPERFAMILY SSF82714 182 271 1.2E-23 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_019990 abf29f11e62bae7f8d8b1fcfac54ec63 374 Pfam PF05359 Domain of Unknown Function (DUF748) 146 281 5.6E-13 T 14-10-2018 IPR008023 Protein of unknown function DUF748 D172_016130 40ca8a02ee919075d180710e2b17406d 648 PIRSF PIRSF005091 9 642 5.3E-95 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like D172_016130 40ca8a02ee919075d180710e2b17406d 648 SUPERFAMILY SSF53649 289 619 2.09E-63 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D172_016130 40ca8a02ee919075d180710e2b17406d 648 Gene3D G3DSA:3.40.720.10 284 568 9.7E-151 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D172_016130 40ca8a02ee919075d180710e2b17406d 648 Pfam PF00884 Sulfatase 291 561 1.2E-39 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 D172_016130 40ca8a02ee919075d180710e2b17406d 648 Gene3D G3DSA:3.30.1120.80 570 647 9.7E-151 T 14-10-2018 D172_004740 7bcfed460e41aac9ce477ef1868a3493 1094 SUPERFAMILY SSF48452 51 305 1.2E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_004740 7bcfed460e41aac9ce477ef1868a3493 1094 SUPERFAMILY SSF48452 544 689 6.17E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_004740 7bcfed460e41aac9ce477ef1868a3493 1094 Pfam PF13429 Tetratricopeptide repeat 412 678 4.1E-12 T 14-10-2018 D172_004740 7bcfed460e41aac9ce477ef1868a3493 1094 Gene3D G3DSA:1.25.40.10 222 495 1.6E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_003420 2a970b40b7a1ea24365bb9f11f9511ed 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 9.3E-8 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal D172_003420 2a970b40b7a1ea24365bb9f11f9511ed 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 1.3E-121 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 D172_003420 2a970b40b7a1ea24365bb9f11f9511ed 241 Pfam PF00005 ABC transporter 19 166 3.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_003420 2a970b40b7a1ea24365bb9f11f9511ed 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_003420 2a970b40b7a1ea24365bb9f11f9511ed 241 Gene3D G3DSA:3.40.50.300 2 241 1.4E-69 T 14-10-2018 D172_003420 2a970b40b7a1ea24365bb9f11f9511ed 241 SMART SM00382 28 231 1.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_003420 2a970b40b7a1ea24365bb9f11f9511ed 241 SUPERFAMILY SSF52540 4 237 4.98E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_013085 61a57e6056d5d1fcf72b67c0b95c6468 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 426 2.1E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_013085 61a57e6056d5d1fcf72b67c0b95c6468 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 212 272 8.7E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_013085 61a57e6056d5d1fcf72b67c0b95c6468 430 SMART SM00388 208 273 1.3E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_013085 61a57e6056d5d1fcf72b67c0b95c6468 430 Gene3D G3DSA:1.10.287.130 159 275 2.6E-18 T 14-10-2018 D172_013085 61a57e6056d5d1fcf72b67c0b95c6468 430 SUPERFAMILY SSF47384 193 272 1.96E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_013085 61a57e6056d5d1fcf72b67c0b95c6468 430 Gene3D G3DSA:3.30.565.10 279 426 7.2E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_013085 61a57e6056d5d1fcf72b67c0b95c6468 430 SUPERFAMILY SSF55874 264 424 5.76E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_013085 61a57e6056d5d1fcf72b67c0b95c6468 430 SMART SM00387 317 428 2.7E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_013085 61a57e6056d5d1fcf72b67c0b95c6468 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 1.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013085 61a57e6056d5d1fcf72b67c0b95c6468 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 1.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013085 61a57e6056d5d1fcf72b67c0b95c6468 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 1.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013085 61a57e6056d5d1fcf72b67c0b95c6468 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 1.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_016735 ad7b1cf51cedbcf114e19dc76785c53b 250 SUPERFAMILY SSF54534 35 240 2.07E-61 T 14-10-2018 D172_016735 ad7b1cf51cedbcf114e19dc76785c53b 250 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 144 1.5E-31 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 D172_016735 ad7b1cf51cedbcf114e19dc76785c53b 250 Gene3D G3DSA:3.10.50.40 133 239 1.7E-43 T 14-10-2018 D172_016735 ad7b1cf51cedbcf114e19dc76785c53b 250 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 152 238 4.7E-28 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D172_016735 ad7b1cf51cedbcf114e19dc76785c53b 250 Gene3D G3DSA:1.10.287.460 19 132 3.8E-27 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 D172_002245 f48f35dc593223768fd1ae5f90764c37 335 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 163 7.7E-48 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D172_002245 f48f35dc593223768fd1ae5f90764c37 335 SUPERFAMILY SSF48179 183 335 2.55E-57 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_002245 f48f35dc593223768fd1ae5f90764c37 335 PIRSF PIRSF000114 1 335 4.9E-103 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D172_002245 f48f35dc593223768fd1ae5f90764c37 335 SUPERFAMILY SSF51735 8 182 3.22E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_002245 f48f35dc593223768fd1ae5f90764c37 335 Gene3D G3DSA:1.10.1040.10 193 335 5.0E-52 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 D172_002245 f48f35dc593223768fd1ae5f90764c37 335 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 1.0E-52 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D172_002245 f48f35dc593223768fd1ae5f90764c37 335 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 37.851 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D172_002245 f48f35dc593223768fd1ae5f90764c37 335 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D172_002245 f48f35dc593223768fd1ae5f90764c37 335 Gene3D G3DSA:3.40.50.720 1 191 2.3E-56 T 14-10-2018 D172_002245 f48f35dc593223768fd1ae5f90764c37 335 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 2.9E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D172_002245 f48f35dc593223768fd1ae5f90764c37 335 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 2.9E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D172_002245 f48f35dc593223768fd1ae5f90764c37 335 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 2.9E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D172_002245 f48f35dc593223768fd1ae5f90764c37 335 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 2.9E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D172_002245 f48f35dc593223768fd1ae5f90764c37 335 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 2.9E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D172_002245 f48f35dc593223768fd1ae5f90764c37 335 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 2.9E-42 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 D172_008495 3e8db4e20a27d1c18d253eff690dabfe 548 SUPERFAMILY SSF54373 211 306 1.33E-34 T 14-10-2018 D172_008495 3e8db4e20a27d1c18d253eff690dabfe 548 Gene3D G3DSA:3.30.9.90 80 449 1.5E-193 T 14-10-2018 D172_008495 3e8db4e20a27d1c18d253eff690dabfe 548 Gene3D G3DSA:3.30.70.20 450 543 3.3E-36 T 14-10-2018 D172_008495 3e8db4e20a27d1c18d253eff690dabfe 548 SUPERFAMILY SSF51905 3 447 8.46E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_008495 3e8db4e20a27d1c18d253eff690dabfe 548 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 8.5E-7 T 14-10-2018 D172_008495 3e8db4e20a27d1c18d253eff690dabfe 548 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 179 194 8.5E-7 T 14-10-2018 D172_008495 3e8db4e20a27d1c18d253eff690dabfe 548 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 445 545 1.2E-48 T 14-10-2018 D172_008495 3e8db4e20a27d1c18d253eff690dabfe 548 Pfam PF01494 FAD binding domain 9 198 3.6E-7 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 D172_008495 3e8db4e20a27d1c18d253eff690dabfe 548 SUPERFAMILY SSF54862 449 548 1.36E-27 T 14-10-2018 D172_008495 3e8db4e20a27d1c18d253eff690dabfe 548 Gene3D G3DSA:3.50.50.60 8 385 1.5E-193 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_010680 416ddf3867b1420891a61a26380c31c2 80 SUPERFAMILY SSF51306 1 79 4.71E-20 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily D172_010680 416ddf3867b1420891a61a26380c31c2 80 Gene3D G3DSA:2.10.109.10 1 79 4.0E-25 T 14-10-2018 D172_010680 416ddf3867b1420891a61a26380c31c2 80 Pfam PF00717 Peptidase S24-like 1 61 6.4E-17 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D172_020655 f7854d40f443a607c2f5612c34e912e6 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D172_020655 f7854d40f443a607c2f5612c34e912e6 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 181 0.003 T 14-10-2018 D172_020655 f7854d40f443a607c2f5612c34e912e6 256 Pfam PF00106 short chain dehydrogenase 7 187 3.1E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020655 f7854d40f443a607c2f5612c34e912e6 256 Gene3D G3DSA:3.40.50.720 1 255 1.1E-53 T 14-10-2018 D172_020655 f7854d40f443a607c2f5612c34e912e6 256 SUPERFAMILY SSF51735 5 252 5.19E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_020655 f7854d40f443a607c2f5612c34e912e6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 1.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020655 f7854d40f443a607c2f5612c34e912e6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020655 f7854d40f443a607c2f5612c34e912e6 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 1.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020655 f7854d40f443a607c2f5612c34e912e6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 9.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020655 f7854d40f443a607c2f5612c34e912e6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 9.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020655 f7854d40f443a607c2f5612c34e912e6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 9.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020655 f7854d40f443a607c2f5612c34e912e6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 9.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020655 f7854d40f443a607c2f5612c34e912e6 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 9.2E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_003530 094afc1aa1b888a61a2d3d288d1d104b 208 Gene3D G3DSA:3.40.30.10 11 201 2.7E-79 T 14-10-2018 D172_003530 094afc1aa1b888a61a2d3d288d1d104b 208 Gene3D G3DSA:1.20.1050.10 89 192 2.7E-79 T 14-10-2018 D172_003530 094afc1aa1b888a61a2d3d288d1d104b 208 SUPERFAMILY SSF52833 11 111 4.99E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_003530 094afc1aa1b888a61a2d3d288d1d104b 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 193 6.1E-11 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal D172_003530 094afc1aa1b888a61a2d3d288d1d104b 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 14 87 5.1E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D172_003530 094afc1aa1b888a61a2d3d288d1d104b 208 SUPERFAMILY SSF47616 82 206 4.41E-26 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D172_000455 5bb44a28fc4e57fd061de215a89ffc74 69 PIRSF PIRSF002599 1 69 2.1E-22 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 D172_000455 5bb44a28fc4e57fd061de215a89ffc74 69 Gene3D G3DSA:2.40.50.140 4 67 6.4E-28 T 14-10-2018 D172_000455 5bb44a28fc4e57fd061de215a89ffc74 69 PRINTS PR00050 Cold shock protein signature 42 60 8.4E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_000455 5bb44a28fc4e57fd061de215a89ffc74 69 PRINTS PR00050 Cold shock protein signature 7 22 8.4E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_000455 5bb44a28fc4e57fd061de215a89ffc74 69 PRINTS PR00050 Cold shock protein signature 27 36 8.4E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_000455 5bb44a28fc4e57fd061de215a89ffc74 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 9.0E-28 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_000455 5bb44a28fc4e57fd061de215a89ffc74 69 SMART SM00357 6 69 3.4E-27 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 D172_000455 5bb44a28fc4e57fd061de215a89ffc74 69 SUPERFAMILY SSF50249 4 68 6.29E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_000455 5bb44a28fc4e57fd061de215a89ffc74 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 14-10-2018 IPR019844 Cold-shock conserved site D172_017765 76bf782edf771dc1834a951fadf37c11 834 Gene3D G3DSA:2.60.120.260 548 668 1.0E-17 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_017765 76bf782edf771dc1834a951fadf37c11 834 SUPERFAMILY SSF49785 552 665 3.7E-24 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_017765 76bf782edf771dc1834a951fadf37c11 834 SUPERFAMILY SSF52743 119 427 4.19E-75 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D172_017765 76bf782edf771dc1834a951fadf37c11 834 SUPERFAMILY SSF49299 672 752 8.89E-21 T 14-10-2018 IPR035986 PKD domain superfamily D172_017765 76bf782edf771dc1834a951fadf37c11 834 Pfam PF00801 PKD domain 681 741 1.4E-10 T 14-10-2018 IPR000601 PKD domain D172_017765 76bf782edf771dc1834a951fadf37c11 834 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 162 173 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site D172_017765 76bf782edf771dc1834a951fadf37c11 834 PRINTS PR00723 Subtilisin serine protease family (S8) signature 217 230 6.5E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related D172_017765 76bf782edf771dc1834a951fadf37c11 834 PRINTS PR00723 Subtilisin serine protease family (S8) signature 383 399 6.5E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related D172_017765 76bf782edf771dc1834a951fadf37c11 834 PRINTS PR00723 Subtilisin serine protease family (S8) signature 157 176 6.5E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related D172_017765 76bf782edf771dc1834a951fadf37c11 834 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 221 231 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site D172_017765 76bf782edf771dc1834a951fadf37c11 834 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 384 394 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site D172_017765 76bf782edf771dc1834a951fadf37c11 834 Pfam PF00082 Subtilase family 158 419 3.5E-42 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 D172_017765 76bf782edf771dc1834a951fadf37c11 834 Pfam PF01483 Proprotein convertase P-domain 586 663 6.9E-20 T 14-10-2018 IPR002884 P domain GO:0004252|GO:0006508 D172_017765 76bf782edf771dc1834a951fadf37c11 834 Gene3D G3DSA:3.40.50.200 117 449 2.2E-118 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D172_017765 76bf782edf771dc1834a951fadf37c11 834 SMART SM00089 675 753 3.5E-15 T 14-10-2018 IPR022409 PKD/Chitinase domain D172_017765 76bf782edf771dc1834a951fadf37c11 834 Gene3D G3DSA:2.60.40.10 669 753 1.2E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_013495 53b5b01fc59c3e9623e72001d68ece8b 422 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 140 2.6E-17 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 D172_013495 53b5b01fc59c3e9623e72001d68ece8b 422 SUPERFAMILY SSF64518 1 422 8.37E-63 T 14-10-2018 D172_013495 53b5b01fc59c3e9623e72001d68ece8b 422 Gene3D G3DSA:1.20.1330.10 281 398 6.0E-9 T 14-10-2018 D172_013495 53b5b01fc59c3e9623e72001d68ece8b 422 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 422 3.2E-72 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 D172_013495 53b5b01fc59c3e9623e72001d68ece8b 422 Gene3D G3DSA:1.20.1330.10 40 232 1.6E-39 T 14-10-2018 D172_002545 b34ec871f34ba075d7797fb7daa6462e 272 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 267 7.7E-81 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 D172_002545 b34ec871f34ba075d7797fb7daa6462e 272 Pfam PF00149 Calcineurin-like phosphoesterase 5 180 1.4E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D172_002545 b34ec871f34ba075d7797fb7daa6462e 272 Gene3D G3DSA:3.60.21.10 1 269 1.2E-67 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like D172_002545 b34ec871f34ba075d7797fb7daa6462e 272 PIRSF PIRSF000903 1 270 7.0E-91 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 D172_002545 b34ec871f34ba075d7797fb7daa6462e 272 SUPERFAMILY SSF56300 1 255 1.37E-51 T 14-10-2018 D172_009835 02d2d4f207dd11579fe8b5c2ed628156 619 SUPERFAMILY SSF51445 39 515 4.15E-76 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_009835 02d2d4f207dd11579fe8b5c2ed628156 619 SMART SM00642 46 506 3.2E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D172_009835 02d2d4f207dd11579fe8b5c2ed628156 619 Pfam PF00128 Alpha amylase, catalytic domain 81 463 2.5E-21 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D172_009835 02d2d4f207dd11579fe8b5c2ed628156 619 Gene3D G3DSA:3.20.20.80 264 489 4.4E-37 T 14-10-2018 D172_009835 02d2d4f207dd11579fe8b5c2ed628156 619 Gene3D G3DSA:3.20.20.80 5 223 6.4E-24 T 14-10-2018 D172_009835 02d2d4f207dd11579fe8b5c2ed628156 619 SUPERFAMILY SSF51011 529 614 7.2E-8 T 14-10-2018 D172_009835 02d2d4f207dd11579fe8b5c2ed628156 619 Gene3D G3DSA:2.60.40.1180 519 614 1.3E-7 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 32 250 1.4E-54 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 Gene3D G3DSA:1.10.760.10 258 380 3.6E-28 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 278 351 7.0E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 Gene3D G3DSA:2.60.40.420 114 251 1.0E-81 T 14-10-2018 IPR008972 Cupredoxin D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 186 234 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 Gene3D G3DSA:1.10.287.90 42 113 1.0E-81 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 SUPERFAMILY SSF81464 18 112 5.23E-26 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 PRINTS PR01166 Cytochrome c oxidase subunit II signature 205 222 7.6E-38 T 14-10-2018 D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 PRINTS PR01166 Cytochrome c oxidase subunit II signature 223 240 7.6E-38 T 14-10-2018 D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 PRINTS PR01166 Cytochrome c oxidase subunit II signature 92 112 7.6E-38 T 14-10-2018 D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 PRINTS PR01166 Cytochrome c oxidase subunit II signature 161 182 7.6E-38 T 14-10-2018 D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 PRINTS PR01166 Cytochrome c oxidase subunit II signature 114 133 7.6E-38 T 14-10-2018 D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 PRINTS PR01166 Cytochrome c oxidase subunit II signature 185 205 7.6E-38 T 14-10-2018 D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 PRINTS PR01166 Cytochrome c oxidase subunit II signature 80 92 7.6E-38 T 14-10-2018 D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 22 103 7.9E-14 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 118 238 3.7E-36 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 SUPERFAMILY SSF49503 110 309 1.44E-52 T 14-10-2018 IPR008972 Cupredoxin D172_016605 489a0d4115ece28fdf6e74d492d99e58 380 SUPERFAMILY SSF46626 261 366 3.39E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_005305 40e1110d42f64b035e1961b748b0891e 154 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 1.0E-59 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 D172_005305 40e1110d42f64b035e1961b748b0891e 154 SUPERFAMILY SSF52335 4 147 4.21E-53 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily D172_005305 40e1110d42f64b035e1961b748b0891e 154 Gene3D G3DSA:3.40.50.1380 1 152 4.4E-63 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily D172_005305 40e1110d42f64b035e1961b748b0891e 154 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 D172_005305 40e1110d42f64b035e1961b748b0891e 154 Pfam PF02142 MGS-like domain 29 117 5.4E-17 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain D172_005305 40e1110d42f64b035e1961b748b0891e 154 SMART SM00851 25 118 5.1E-21 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain D172_005305 40e1110d42f64b035e1961b748b0891e 154 PIRSF PIRSF006614 8 151 3.4E-61 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 D172_005305 40e1110d42f64b035e1961b748b0891e 154 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.247 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 D172_014910 c2e0cc8d2e39659c5ab9682f657941fa 303 Gene3D G3DSA:3.30.230.20 1 128 1.0E-47 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 D172_014910 c2e0cc8d2e39659c5ab9682f657941fa 303 Gene3D G3DSA:3.30.1700.10 129 300 4.0E-67 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 D172_014910 c2e0cc8d2e39659c5ab9682f657941fa 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 3.1E-105 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 D172_014910 c2e0cc8d2e39659c5ab9682f657941fa 303 SUPERFAMILY SSF54211 3 124 2.12E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_014910 c2e0cc8d2e39659c5ab9682f657941fa 303 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 43.934 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 D172_014910 c2e0cc8d2e39659c5ab9682f657941fa 303 SUPERFAMILY SSF54211 135 277 3.26E-50 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_014910 c2e0cc8d2e39659c5ab9682f657941fa 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 294 1.6E-121 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 D172_003250 5419ed4cd478775fe83529174f916e23 142 Pfam PF13650 Aspartyl protease 22 118 5.9E-12 T 14-10-2018 D172_003250 5419ed4cd478775fe83529174f916e23 142 SUPERFAMILY SSF50630 12 128 3.24E-11 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily D172_003250 5419ed4cd478775fe83529174f916e23 142 Gene3D G3DSA:2.40.70.10 19 141 2.2E-20 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily D172_006740 0f825117257d9823271145c870f01249 2059 SUPERFAMILY SSF51126 1184 1498 5.23E-37 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor D172_006740 0f825117257d9823271145c870f01249 2059 SMART SM00656 1564 1794 4.7E-27 T 14-10-2018 IPR002022 Pectate lyase D172_006740 0f825117257d9823271145c870f01249 2059 Gene3D G3DSA:2.160.20.10 1199 1520 3.7E-44 T 14-10-2018 IPR012334 Pectin lyase fold D172_006740 0f825117257d9823271145c870f01249 2059 Gene3D G3DSA:2.60.120.560 748 940 3.5E-16 T 14-10-2018 D172_006740 0f825117257d9823271145c870f01249 2059 Gene3D G3DSA:2.160.20.10 1548 1870 2.4E-96 T 14-10-2018 IPR012334 Pectin lyase fold D172_006740 0f825117257d9823271145c870f01249 2059 Pfam PF00544 Pectate lyase 1618 1788 1.5E-31 T 14-10-2018 IPR002022 Pectate lyase D172_006740 0f825117257d9823271145c870f01249 2059 SUPERFAMILY SSF51126 1551 1869 9.95E-72 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor D172_006740 0f825117257d9823271145c870f01249 2059 Pfam PF01095 Pectinesterase 1191 1458 7.6E-14 T 14-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 D172_012610 ee654069ff4525737f515df728f5d039 658 SMART SM00656 68 280 4.6E-21 T 14-10-2018 IPR002022 Pectate lyase D172_012610 ee654069ff4525737f515df728f5d039 658 Pfam PF00544 Pectate lyase 70 274 1.5E-33 T 14-10-2018 IPR002022 Pectate lyase D172_012610 ee654069ff4525737f515df728f5d039 658 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 577 642 1.1E-14 T 14-10-2018 IPR000772 Ricin B, lectin domain D172_012610 ee654069ff4525737f515df728f5d039 658 Gene3D G3DSA:2.60.120.260 384 502 2.0E-12 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_012610 ee654069ff4525737f515df728f5d039 658 SUPERFAMILY SSF50370 517 656 4.19E-32 T 14-10-2018 IPR035992 Ricin B-like lectins D172_012610 ee654069ff4525737f515df728f5d039 658 SMART SM00458 517 656 1.1E-4 T 14-10-2018 IPR000772 Ricin B, lectin domain D172_012610 ee654069ff4525737f515df728f5d039 658 Gene3D G3DSA:2.80.10.50 572 656 3.3E-20 T 14-10-2018 D172_012610 ee654069ff4525737f515df728f5d039 658 SUPERFAMILY SSF49785 383 502 1.51E-7 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_012610 ee654069ff4525737f515df728f5d039 658 Gene3D G3DSA:2.80.10.50 511 571 4.3E-8 T 14-10-2018 D172_012610 ee654069ff4525737f515df728f5d039 658 SUPERFAMILY SSF51126 29 351 5.36E-71 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor D172_012610 ee654069ff4525737f515df728f5d039 658 Gene3D G3DSA:2.160.20.10 28 351 1.3E-100 T 14-10-2018 IPR012334 Pectin lyase fold D172_009690 45a1986734967815bd23ff5627576666 112 SUPERFAMILY SSF82057 37 111 3.34E-24 T 14-10-2018 D172_009690 45a1986734967815bd23ff5627576666 112 SUPERFAMILY SSF57783 1 37 8.67E-13 T 14-10-2018 D172_009690 45a1986734967815bd23ff5627576666 112 Gene3D G3DSA:2.30.30.40 41 112 1.1E-27 T 14-10-2018 D172_009690 45a1986734967815bd23ff5627576666 112 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 2.1E-41 T 14-10-2018 IPR004624 PhnA protein D172_009690 45a1986734967815bd23ff5627576666 112 Gene3D G3DSA:2.20.25.10 1 40 1.1E-17 T 14-10-2018 D172_009690 45a1986734967815bd23ff5627576666 112 Pfam PF03831 PhnA domain 43 111 3.9E-26 T 14-10-2018 IPR013988 PhnA protein, C-terminal D172_009690 45a1986734967815bd23ff5627576666 112 Pfam PF08274 PhnA Zinc-Ribbon 2 30 3.6E-12 T 14-10-2018 IPR013987 PhnA protein, N-terminal D172_002235 ad9398f2507711efc73cd5e8467fb4c2 85 PRINTS PR00160 Glutaredoxin signature 47 60 1.5E-16 T 14-10-2018 IPR014025 Glutaredoxin subgroup D172_002235 ad9398f2507711efc73cd5e8467fb4c2 85 PRINTS PR00160 Glutaredoxin signature 61 74 1.5E-16 T 14-10-2018 IPR014025 Glutaredoxin subgroup D172_002235 ad9398f2507711efc73cd5e8467fb4c2 85 PRINTS PR00160 Glutaredoxin signature 4 22 1.5E-16 T 14-10-2018 IPR014025 Glutaredoxin subgroup D172_002235 ad9398f2507711efc73cd5e8467fb4c2 85 Pfam PF00462 Glutaredoxin 4 64 3.1E-21 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 D172_002235 ad9398f2507711efc73cd5e8467fb4c2 85 SUPERFAMILY SSF52833 1 84 9.0E-30 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_002235 ad9398f2507711efc73cd5e8467fb4c2 85 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 D172_002235 ad9398f2507711efc73cd5e8467fb4c2 85 Gene3D G3DSA:3.40.30.10 1 84 3.7E-28 T 14-10-2018 D172_002235 ad9398f2507711efc73cd5e8467fb4c2 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 81 2.0E-33 T 14-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 D172_011135 08a0abb75bf4c4477b1a4c32645b6112 295 Pfam PF03466 LysR substrate binding domain 92 289 1.5E-32 T 14-10-2018 IPR005119 LysR, substrate-binding D172_011135 08a0abb75bf4c4477b1a4c32645b6112 295 Gene3D G3DSA:3.40.190.10 163 267 2.5E-61 T 14-10-2018 D172_011135 08a0abb75bf4c4477b1a4c32645b6112 295 Gene3D G3DSA:1.10.10.10 1 91 1.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_011135 08a0abb75bf4c4477b1a4c32645b6112 295 SUPERFAMILY SSF53850 90 290 9.77E-35 T 14-10-2018 D172_011135 08a0abb75bf4c4477b1a4c32645b6112 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_011135 08a0abb75bf4c4477b1a4c32645b6112 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_011135 08a0abb75bf4c4477b1a4c32645b6112 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.5E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_011135 08a0abb75bf4c4477b1a4c32645b6112 295 SUPERFAMILY SSF46785 1 112 1.43E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_011135 08a0abb75bf4c4477b1a4c32645b6112 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_011135 08a0abb75bf4c4477b1a4c32645b6112 295 Gene3D G3DSA:3.40.190.10 93 288 2.5E-61 T 14-10-2018 D172_019135 e2c85f05e406e0c395c8874ee0577d76 322 TIGRFAM TIGR02249 integrase_gron: integron integrase 7 322 1.6E-138 T 14-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 D172_019135 e2c85f05e406e0c395c8874ee0577d76 322 Gene3D G3DSA:1.10.443.10 97 312 1.3E-68 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D172_019135 e2c85f05e406e0c395c8874ee0577d76 322 Pfam PF00589 Phage integrase family 107 309 4.8E-46 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D172_019135 e2c85f05e406e0c395c8874ee0577d76 322 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 9 89 3.3E-23 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D172_019135 e2c85f05e406e0c395c8874ee0577d76 322 Gene3D G3DSA:1.10.150.130 4 96 5.3E-28 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal D172_019135 e2c85f05e406e0c395c8874ee0577d76 322 SUPERFAMILY SSF56349 103 318 2.44E-47 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D172_000990 8a006dc079391620b1661eb105e38876 831 Gene3D G3DSA:3.40.50.1820 552 828 1.0E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_000990 8a006dc079391620b1661eb105e38876 831 SUPERFAMILY SSF53474 563 818 2.82E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_000990 8a006dc079391620b1661eb105e38876 831 Pfam PF00326 Prolyl oligopeptidase family 614 819 9.8E-46 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 D172_000990 8a006dc079391620b1661eb105e38876 831 SUPERFAMILY SSF82171 192 549 9.29E-16 T 14-10-2018 D172_018305 fc2052a256399baa95791353194b2628 316 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 D172_018305 fc2052a256399baa95791353194b2628 316 SUPERFAMILY SSF53613 4 307 1.29E-63 T 14-10-2018 IPR029056 Ribokinase-like D172_018305 fc2052a256399baa95791353194b2628 316 Gene3D G3DSA:3.40.1190.20 2 306 3.5E-69 T 14-10-2018 IPR029056 Ribokinase-like D172_018305 fc2052a256399baa95791353194b2628 316 Pfam PF00294 pfkB family carbohydrate kinase 4 305 1.7E-56 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB D172_016895 e0791be4ea6e1f9a2846b0d67db24158 341 Gene3D G3DSA:3.40.50.10470 175 340 4.2E-51 T 14-10-2018 D172_016895 e0791be4ea6e1f9a2846b0d67db24158 341 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 5 341 35.337 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 D172_016895 e0791be4ea6e1f9a2846b0d67db24158 341 Pfam PF01008 Initiation factor 2 subunit family 47 328 1.8E-68 T 14-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 D172_016895 e0791be4ea6e1f9a2846b0d67db24158 341 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 8 328 1.2E-120 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 D172_016895 e0791be4ea6e1f9a2846b0d67db24158 341 Gene3D G3DSA:1.20.120.1840 1 174 2.3E-44 T 14-10-2018 D172_016895 e0791be4ea6e1f9a2846b0d67db24158 341 SUPERFAMILY SSF100950 7 332 2.81E-105 T 14-10-2018 IPR037171 NagB/RpiA transferase-like D172_016895 e0791be4ea6e1f9a2846b0d67db24158 341 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 33 327 8.0E-96 T 14-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 D172_020265 e6246314d00e256be74aa899553887c0 346 Gene3D G3DSA:3.30.420.10 161 325 1.4E-16 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_020265 e6246314d00e256be74aa899553887c0 346 SUPERFAMILY SSF46689 18 114 6.99E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_020265 e6246314d00e256be74aa899553887c0 346 Pfam PF00665 Integrase core domain 161 283 5.8E-21 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_020265 e6246314d00e256be74aa899553887c0 346 SUPERFAMILY SSF53098 160 335 4.05E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_020265 e6246314d00e256be74aa899553887c0 346 Pfam PF13551 Winged helix-turn helix 11 74 6.3E-20 T 14-10-2018 D172_011635 7cf974fc94f6c3e6978b65ffdacf32ee 360 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 9 357 6.7E-169 T 14-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 D172_011635 7cf974fc94f6c3e6978b65ffdacf32ee 360 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 D172_011635 7cf974fc94f6c3e6978b65ffdacf32ee 360 SUPERFAMILY SSF51569 5 357 7.69E-123 T 14-10-2018 D172_011635 7cf974fc94f6c3e6978b65ffdacf32ee 360 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 D172_011635 7cf974fc94f6c3e6978b65ffdacf32ee 360 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 2.1E-103 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 D172_011635 7cf974fc94f6c3e6978b65ffdacf32ee 360 Pfam PF01116 Fructose-bisphosphate aldolase class-II 18 357 1.6E-86 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 D172_011635 7cf974fc94f6c3e6978b65ffdacf32ee 360 Gene3D G3DSA:3.20.20.70 4 358 4.6E-139 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_011635 7cf974fc94f6c3e6978b65ffdacf32ee 360 PIRSF PIRSF001359 13 358 9.2E-88 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 D172_017015 80d93e37f4ec9209821ae4dd7fe37770 2371 Pfam PF05593 RHS Repeat 1664 1695 2.2E-5 T 14-10-2018 IPR031325 RHS repeat D172_017015 80d93e37f4ec9209821ae4dd7fe37770 2371 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 184 358 1.4E-11 T 14-10-2018 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 D172_017015 80d93e37f4ec9209821ae4dd7fe37770 2371 SUPERFAMILY SSF69318 93 666 4.62E-24 T 14-10-2018 D172_017015 80d93e37f4ec9209821ae4dd7fe37770 2371 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1663 1699 3.3E-4 T 14-10-2018 IPR006530 YD repeat D172_017015 80d93e37f4ec9209821ae4dd7fe37770 2371 SUPERFAMILY SSF69318 651 916 5.49E-12 T 14-10-2018 D172_017015 80d93e37f4ec9209821ae4dd7fe37770 2371 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 542 603 1.1E-7 T 14-10-2018 D172_017015 80d93e37f4ec9209821ae4dd7fe37770 2371 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 815 870 3.4E-6 T 14-10-2018 D172_017015 80d93e37f4ec9209821ae4dd7fe37770 2371 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1996 2062 3.3E-18 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 D172_017015 80d93e37f4ec9209821ae4dd7fe37770 2371 Gene3D G3DSA:2.180.10.10 1761 2062 5.6E-27 T 14-10-2018 D172_019200 9996ac118e3f308c1cbde4bc290be49a 410 SUPERFAMILY SSF53448 39 407 2.14E-91 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_019200 9996ac118e3f308c1cbde4bc290be49a 410 Gene3D G3DSA:3.90.550.10 102 325 5.0E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_003930 0a9db007cbfb40720d2e00c3bf0e3243 182 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 177 1.9E-28 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D172_003930 0a9db007cbfb40720d2e00c3bf0e3243 182 SUPERFAMILY SSF88946 8 107 2.16E-29 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D172_003930 0a9db007cbfb40720d2e00c3bf0e3243 182 SUPERFAMILY SSF88659 125 180 2.43E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_003930 0a9db007cbfb40720d2e00c3bf0e3243 182 Gene3D G3DSA:1.10.1740.10 8 120 6.0E-31 T 14-10-2018 D172_003930 0a9db007cbfb40720d2e00c3bf0e3243 182 Gene3D G3DSA:1.10.10.10 123 181 6.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_003930 0a9db007cbfb40720d2e00c3bf0e3243 182 Pfam PF08281 Sigma-70, region 4 125 175 3.6E-16 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_003930 0a9db007cbfb40720d2e00c3bf0e3243 182 Pfam PF04542 Sigma-70 region 2 31 97 3.4E-19 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D172_013195 5d12687ba6455eeae51b3c292708ddc4 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 72 1.7E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_013195 5d12687ba6455eeae51b3c292708ddc4 237 Gene3D G3DSA:1.10.10.10 2 80 1.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_013195 5d12687ba6455eeae51b3c292708ddc4 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 2.7E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_013195 5d12687ba6455eeae51b3c292708ddc4 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 2.7E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_013195 5d12687ba6455eeae51b3c292708ddc4 237 SUPERFAMILY SSF48008 80 231 7.59E-55 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_013195 5d12687ba6455eeae51b3c292708ddc4 237 Pfam PF07840 FadR C-terminal domain 73 235 8.9E-70 T 14-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 D172_013195 5d12687ba6455eeae51b3c292708ddc4 237 SMART SM00345 13 72 3.3E-23 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_013195 5d12687ba6455eeae51b3c292708ddc4 237 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 237 148.732 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 D172_013195 5d12687ba6455eeae51b3c292708ddc4 237 SUPERFAMILY SSF46785 11 76 7.21E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_013195 5d12687ba6455eeae51b3c292708ddc4 237 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 3 237 2.6E-120 T 14-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 D172_013195 5d12687ba6455eeae51b3c292708ddc4 237 Gene3D G3DSA:1.20.120.530 81 236 3.4E-40 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_013555 13e271bd8ff1c327583a6002ce4ba729 310 Gene3D G3DSA:2.30.30.40 25 147 5.1E-29 T 14-10-2018 D172_013555 13e271bd8ff1c327583a6002ce4ba729 310 SMART SM00260 17 153 6.9E-20 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D172_013555 13e271bd8ff1c327583a6002ce4ba729 310 PIRSF PIRSF002867 1 310 5.8E-105 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV D172_013555 13e271bd8ff1c327583a6002ce4ba729 310 SUPERFAMILY SSF52172 177 307 5.55E-25 T 14-10-2018 IPR011006 CheY-like superfamily D172_013555 13e271bd8ff1c327583a6002ce4ba729 310 Pfam PF00072 Response regulator receiver domain 182 303 1.5E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_013555 13e271bd8ff1c327583a6002ce4ba729 310 Pfam PF01584 CheW-like domain 21 155 7.2E-35 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D172_013555 13e271bd8ff1c327583a6002ce4ba729 310 Gene3D G3DSA:2.40.50.180 39 153 5.1E-29 T 14-10-2018 D172_013555 13e271bd8ff1c327583a6002ce4ba729 310 SUPERFAMILY SSF50341 16 157 1.19E-35 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 D172_013555 13e271bd8ff1c327583a6002ce4ba729 310 Gene3D G3DSA:3.40.50.2300 173 309 3.2E-25 T 14-10-2018 D172_013555 13e271bd8ff1c327583a6002ce4ba729 310 SMART SM00448 180 303 1.8E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_015140 6b17ac438b428bc364c88b1efbce6a3e 322 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 322 42.353 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_015140 6b17ac438b428bc364c88b1efbce6a3e 322 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 15 183 2.1E-54 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_015140 6b17ac438b428bc364c88b1efbce6a3e 322 SUPERFAMILY SSF56655 4 321 4.23E-104 T 14-10-2018 D172_015140 6b17ac438b428bc364c88b1efbce6a3e 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 138 161 1.1E-59 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_015140 6b17ac438b428bc364c88b1efbce6a3e 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 297 322 1.1E-59 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_015140 6b17ac438b428bc364c88b1efbce6a3e 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 169 192 1.1E-59 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_015140 6b17ac438b428bc364c88b1efbce6a3e 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 22 49 1.1E-59 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_015140 6b17ac438b428bc364c88b1efbce6a3e 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 59 85 1.1E-59 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_015140 6b17ac438b428bc364c88b1efbce6a3e 322 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 195 222 1.1E-59 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_015140 6b17ac438b428bc364c88b1efbce6a3e 322 PIRSF PIRSF000904 7 322 6.2E-112 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_015140 6b17ac438b428bc364c88b1efbce6a3e 322 PIRSF PIRSF500210 5 322 7.0E-113 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_015140 6b17ac438b428bc364c88b1efbce6a3e 322 Gene3D G3DSA:3.40.190.80 186 322 9.9E-51 T 14-10-2018 D172_015140 6b17ac438b428bc364c88b1efbce6a3e 322 Gene3D G3DSA:3.30.540.10 9 185 5.0E-60 T 14-10-2018 D172_006485 c1bd283611ab941e16240aae7831b86f 93 Pfam PF07023 Protein of unknown function (DUF1315) 5 84 2.2E-18 T 14-10-2018 IPR009749 Protein of unknown function DUF1315 D172_005670 7e46e5661f33c21cf816065c41392eed 379 ProSitePatterns PS00847 MCM family signature. 282 290 - T 14-10-2018 IPR018525 Mini-chromosome maintenance, conserved site GO:0003677|GO:0005524|GO:0006260 Reactome: R-HSA-176187|Reactome: R-HSA-176974|Reactome: R-HSA-68867|Reactome: R-HSA-68949|Reactome: R-HSA-68962|Reactome: R-HSA-69052 D172_005670 7e46e5661f33c21cf816065c41392eed 379 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 37 328 1.8E-33 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D172_005670 7e46e5661f33c21cf816065c41392eed 379 SUPERFAMILY SSF52540 18 340 3.1E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_003120 c0a85c2bec399bede4452aef9475f78b 132 Pfam PF13279 Thioesterase-like superfamily 10 121 1.1E-12 T 14-10-2018 D172_003120 c0a85c2bec399bede4452aef9475f78b 132 SUPERFAMILY SSF54637 1 119 6.36E-29 T 14-10-2018 IPR029069 HotDog domain superfamily D172_003120 c0a85c2bec399bede4452aef9475f78b 132 PIRSF PIRSF003230 1 132 5.2E-21 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 D172_003120 c0a85c2bec399bede4452aef9475f78b 132 Gene3D G3DSA:3.10.129.10 1 132 1.9E-29 T 14-10-2018 D172_009075 dab4f33c0e0ebdc53454deebce7f404b 221 Gene3D G3DSA:2.40.100.10 90 219 2.5E-50 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily D172_009075 dab4f33c0e0ebdc53454deebce7f404b 221 SUPERFAMILY SSF50891 93 212 8.34E-40 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily D172_009075 dab4f33c0e0ebdc53454deebce7f404b 221 SMART SM00796 5 202 2.9E-66 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D D172_009075 dab4f33c0e0ebdc53454deebce7f404b 221 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 27 211 1.8E-59 T 14-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 D172_009075 dab4f33c0e0ebdc53454deebce7f404b 221 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 26 201 6.5E-57 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D D172_002730 e332efb347423bc9619a7691a26c1ca4 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 313 9.1E-139 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 D172_002730 e332efb347423bc9619a7691a26c1ca4 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 166.845 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 D172_002730 e332efb347423bc9619a7691a26c1ca4 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 121 3.4E-46 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 D172_002730 e332efb347423bc9619a7691a26c1ca4 316 Gene3D G3DSA:3.30.1490.20 138 202 2.9E-118 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D172_002730 e332efb347423bc9619a7691a26c1ca4 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 2.7E-77 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 D172_002730 e332efb347423bc9619a7691a26c1ca4 316 SUPERFAMILY SSF56059 124 313 2.14E-59 T 14-10-2018 D172_002730 e332efb347423bc9619a7691a26c1ca4 316 SUPERFAMILY SSF52440 3 123 6.91E-44 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily D172_002730 e332efb347423bc9619a7691a26c1ca4 316 Gene3D G3DSA:3.30.470.20 116 296 2.9E-118 T 14-10-2018 D172_002730 e332efb347423bc9619a7691a26c1ca4 316 Gene3D G3DSA:3.40.50.20 9 115 2.9E-118 T 14-10-2018 D172_008990 290bb79ee19ed7e549dfd8eb0bff5db9 256 Gene3D G3DSA:3.40.50.720 1 256 1.0E-69 T 14-10-2018 D172_008990 290bb79ee19ed7e549dfd8eb0bff5db9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 2.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_008990 290bb79ee19ed7e549dfd8eb0bff5db9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_008990 290bb79ee19ed7e549dfd8eb0bff5db9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_008990 290bb79ee19ed7e549dfd8eb0bff5db9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 2.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_008990 290bb79ee19ed7e549dfd8eb0bff5db9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 2.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_008990 290bb79ee19ed7e549dfd8eb0bff5db9 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 2.7E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_008990 290bb79ee19ed7e549dfd8eb0bff5db9 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D172_008990 290bb79ee19ed7e549dfd8eb0bff5db9 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 6.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_008990 290bb79ee19ed7e549dfd8eb0bff5db9 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 6.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_008990 290bb79ee19ed7e549dfd8eb0bff5db9 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 6.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_008990 290bb79ee19ed7e549dfd8eb0bff5db9 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 197 4.8E-4 T 14-10-2018 D172_008990 290bb79ee19ed7e549dfd8eb0bff5db9 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 254 1.7E-50 T 14-10-2018 D172_008990 290bb79ee19ed7e549dfd8eb0bff5db9 256 SUPERFAMILY SSF51735 4 254 1.69E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_019430 e2f9d0fc6f3a00ebdf63c55e72f0574a 191 SUPERFAMILY SSF46689 4 80 1.08E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_019430 e2f9d0fc6f3a00ebdf63c55e72f0574a 191 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 1 184 1.6E-73 T 14-10-2018 IPR017757 Transcriptional repressor BetI D172_019430 e2f9d0fc6f3a00ebdf63c55e72f0574a 191 Gene3D G3DSA:1.10.357.10 2 188 3.1E-38 T 14-10-2018 D172_019430 e2f9d0fc6f3a00ebdf63c55e72f0574a 191 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site D172_019430 e2f9d0fc6f3a00ebdf63c55e72f0574a 191 SUPERFAMILY SSF48498 76 166 3.11E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D172_019430 e2f9d0fc6f3a00ebdf63c55e72f0574a 191 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 78 184 4.4E-28 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal D172_019430 e2f9d0fc6f3a00ebdf63c55e72f0574a 191 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 191 87.46 T 14-10-2018 IPR017757 Transcriptional repressor BetI D172_019430 e2f9d0fc6f3a00ebdf63c55e72f0574a 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 1.5E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_011465 56a758b79322322a41b854bdfa69d848 459 PIRSF PIRSF006603 3 452 1.6E-115 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D172_011465 56a758b79322322a41b854bdfa69d848 459 Pfam PF01554 MatE 252 413 1.6E-20 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D172_011465 56a758b79322322a41b854bdfa69d848 459 Pfam PF01554 MatE 28 188 2.2E-32 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D172_011465 56a758b79322322a41b854bdfa69d848 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 414 8.3E-65 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D172_000850 d3804136bbdcc8015de329b2dfea415c 462 Gene3D G3DSA:3.40.50.300 212 372 1.1E-43 T 14-10-2018 D172_000850 d3804136bbdcc8015de329b2dfea415c 462 Pfam PF00271 Helicase conserved C-terminal domain 238 338 8.8E-25 T 14-10-2018 IPR001650 Helicase, C-terminal D172_000850 d3804136bbdcc8015de329b2dfea415c 462 Pfam PF03880 DbpA RNA binding domain 388 458 8.1E-21 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain D172_000850 d3804136bbdcc8015de329b2dfea415c 462 Pfam PF00270 DEAD/DEAH box helicase 28 193 4.2E-48 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D172_000850 d3804136bbdcc8015de329b2dfea415c 462 SUPERFAMILY SSF52540 145 349 3.33E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_000850 d3804136bbdcc8015de329b2dfea415c 462 Gene3D G3DSA:3.40.50.300 2 209 1.1E-73 T 14-10-2018 D172_000850 d3804136bbdcc8015de329b2dfea415c 462 Gene3D G3DSA:3.30.70.330 387 461 1.9E-20 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily D172_000850 d3804136bbdcc8015de329b2dfea415c 462 SUPERFAMILY SSF52540 4 208 2.18E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_000850 d3804136bbdcc8015de329b2dfea415c 462 SMART SM00490 257 338 1.9E-25 T 14-10-2018 IPR001650 Helicase, C-terminal D172_000850 d3804136bbdcc8015de329b2dfea415c 462 SMART SM00487 23 220 5.7E-59 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_011035 7652d844732490def5159a2da7275f10 633 SMART SM00563 462 578 1.4E-27 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D172_011035 7652d844732490def5159a2da7275f10 633 Pfam PF07690 Major Facilitator Superfamily 20 389 2.8E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_011035 7652d844732490def5159a2da7275f10 633 Pfam PF01553 Acyltransferase 447 574 4.3E-22 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D172_011035 7652d844732490def5159a2da7275f10 633 SUPERFAMILY SSF69593 414 617 8.11E-31 T 14-10-2018 D172_011035 7652d844732490def5159a2da7275f10 633 Gene3D G3DSA:1.20.1250.20 13 427 2.3E-24 T 14-10-2018 D172_011035 7652d844732490def5159a2da7275f10 633 SUPERFAMILY SSF103473 15 431 2.88E-23 T 14-10-2018 IPR036259 MFS transporter superfamily D172_014965 383c7a14190949f265e73e0f10d4e8b8 492 Pfam PF08245 Mur ligase middle domain 106 310 2.8E-49 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D172_014965 383c7a14190949f265e73e0f10d4e8b8 492 SUPERFAMILY SSF53623 97 330 4.32E-73 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D172_014965 383c7a14190949f265e73e0f10d4e8b8 492 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 483 32.893 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 D172_014965 383c7a14190949f265e73e0f10d4e8b8 492 SUPERFAMILY SSF53244 331 485 9.55E-47 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D172_014965 383c7a14190949f265e73e0f10d4e8b8 492 SUPERFAMILY SSF63418 4 95 2.35E-20 T 14-10-2018 IPR035911 MurE/MurF, N-terminal D172_014965 383c7a14190949f265e73e0f10d4e8b8 492 Pfam PF02875 Mur ligase family, glutamate ligase domain 331 416 1.2E-18 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 D172_014965 383c7a14190949f265e73e0f10d4e8b8 492 Pfam PF01225 Mur ligase family, catalytic domain 20 67 2.2E-11 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 D172_014965 383c7a14190949f265e73e0f10d4e8b8 492 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 20 483 9.1E-158 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 D172_014965 383c7a14190949f265e73e0f10d4e8b8 492 Gene3D G3DSA:3.40.1390.10 1 96 3.9E-22 T 14-10-2018 D172_014965 383c7a14190949f265e73e0f10d4e8b8 492 Gene3D G3DSA:3.90.190.20 338 490 8.1E-54 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D172_014965 383c7a14190949f265e73e0f10d4e8b8 492 Gene3D G3DSA:3.40.1190.10 97 334 4.7E-77 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 SUPERFAMILY SSF52172 666 794 2.99E-32 T 14-10-2018 IPR011006 CheY-like superfamily D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 Pfam PF01627 Hpt domain 826 894 1.2E-6 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 389 509 1.9E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 SUPERFAMILY SSF55874 331 509 6.02E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 SMART SM00388 277 342 1.8E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 SMART SM00387 389 510 4.0E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 Gene3D G3DSA:3.30.565.10 341 514 2.5E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 SMART SM00448 665 783 2.0E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 SUPERFAMILY SSF47226 766 903 4.84E-14 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 Gene3D G3DSA:1.20.120.160 817 922 5.7E-12 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 Pfam PF00512 His Kinase A (phospho-acceptor) domain 278 342 5.5E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 SUPERFAMILY SSF47384 262 343 2.94E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 Pfam PF00072 Response regulator receiver domain 667 783 3.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 1.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 1.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 449 1.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 463 1.7E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 Gene3D G3DSA:3.40.50.2300 659 787 7.4E-35 T 14-10-2018 D172_003680 b2880b480a5d8af7d6672db9e1d4c745 924 Gene3D G3DSA:1.10.287.130 240 340 2.3E-25 T 14-10-2018 D172_005655 beaf27e7cb957b36d3373f64c202a6ac 230 Gene3D G3DSA:3.30.420.10 9 213 1.6E-53 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_005655 beaf27e7cb957b36d3373f64c202a6ac 230 SMART SM00479 17 202 3.1E-32 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D172_005655 beaf27e7cb957b36d3373f64c202a6ac 230 SUPERFAMILY SSF53098 10 206 1.23E-57 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_005655 beaf27e7cb957b36d3373f64c202a6ac 230 Hamap MF_00157 Ribonuclease T [rnt]. 1 230 110.756 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 D172_005655 beaf27e7cb957b36d3373f64c202a6ac 230 Pfam PF00929 Exonuclease 19 193 9.7E-38 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D172_005655 beaf27e7cb957b36d3373f64c202a6ac 230 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 207 3.5E-98 T 14-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 D172_018750 f5229584df80b34cef66ecdb870f2f2f 454 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 142 442 4.3E-104 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D172_018750 f5229584df80b34cef66ecdb870f2f2f 454 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 301 308 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D172_018750 f5229584df80b34cef66ecdb870f2f2f 454 PRINTS PR00481 Cytosol aminopeptidase signature 216 233 2.2E-43 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_018750 f5229584df80b34cef66ecdb870f2f2f 454 PRINTS PR00481 Cytosol aminopeptidase signature 275 296 2.2E-43 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_018750 f5229584df80b34cef66ecdb870f2f2f 454 PRINTS PR00481 Cytosol aminopeptidase signature 238 259 2.2E-43 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_018750 f5229584df80b34cef66ecdb870f2f2f 454 PRINTS PR00481 Cytosol aminopeptidase signature 297 317 2.2E-43 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_018750 f5229584df80b34cef66ecdb870f2f2f 454 PRINTS PR00481 Cytosol aminopeptidase signature 325 340 2.2E-43 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_018750 f5229584df80b34cef66ecdb870f2f2f 454 Gene3D G3DSA:3.40.220.10 4 125 1.9E-34 T 14-10-2018 D172_018750 f5229584df80b34cef66ecdb870f2f2f 454 Gene3D G3DSA:3.40.630.10 128 452 1.5E-121 T 14-10-2018 D172_018750 f5229584df80b34cef66ecdb870f2f2f 454 SUPERFAMILY SSF53187 137 451 2.04E-104 T 14-10-2018 D172_001380 32b9042bccaab087bfd5163313373792 382 PIRSF PIRSF000530 1 381 3.2E-109 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 D172_001380 32b9042bccaab087bfd5163313373792 382 Gene3D G3DSA:3.30.230.10 21 199 7.0E-116 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D172_001380 32b9042bccaab087bfd5163313373792 382 Pfam PF08544 GHMP kinases C terminal 278 358 9.9E-11 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain D172_001380 32b9042bccaab087bfd5163313373792 382 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 119 130 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 D172_001380 32b9042bccaab087bfd5163313373792 382 PRINTS PR00959 Mevalonate kinase family signature 160 179 1.6E-34 T 14-10-2018 D172_001380 32b9042bccaab087bfd5163313373792 382 PRINTS PR00959 Mevalonate kinase family signature 24 48 1.6E-34 T 14-10-2018 D172_001380 32b9042bccaab087bfd5163313373792 382 PRINTS PR00959 Mevalonate kinase family signature 326 343 1.6E-34 T 14-10-2018 D172_001380 32b9042bccaab087bfd5163313373792 382 PRINTS PR00959 Mevalonate kinase family signature 117 139 1.6E-34 T 14-10-2018 D172_001380 32b9042bccaab087bfd5163313373792 382 Pfam PF10509 Galactokinase galactose-binding signature 8 54 5.6E-17 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 D172_001380 32b9042bccaab087bfd5163313373792 382 SUPERFAMILY SSF55060 202 379 1.36E-45 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily D172_001380 32b9042bccaab087bfd5163313373792 382 Gene3D G3DSA:3.30.70.890 200 355 7.0E-116 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily D172_001380 32b9042bccaab087bfd5163313373792 382 Pfam PF00288 GHMP kinases N terminal domain 112 179 7.7E-12 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 D172_001380 32b9042bccaab087bfd5163313373792 382 PRINTS PR00473 Galactokinase signature 261 275 8.9E-25 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 D172_001380 32b9042bccaab087bfd5163313373792 382 PRINTS PR00473 Galactokinase signature 26 44 8.9E-25 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 D172_001380 32b9042bccaab087bfd5163313373792 382 PRINTS PR00473 Galactokinase signature 90 101 8.9E-25 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 D172_001380 32b9042bccaab087bfd5163313373792 382 PRINTS PR00473 Galactokinase signature 110 128 8.9E-25 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 D172_001380 32b9042bccaab087bfd5163313373792 382 SUPERFAMILY SSF54211 4 201 2.96E-58 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_001380 32b9042bccaab087bfd5163313373792 382 TIGRFAM TIGR00131 gal_kin: galactokinase 5 377 1.6E-107 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 D172_020285 385903c154ab9f0425d9ff9160f5073e 784 Gene3D G3DSA:3.50.50.60 205 322 2.3E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_020285 385903c154ab9f0425d9ff9160f5073e 784 SUPERFAMILY SSF54862 665 750 2.23E-15 T 14-10-2018 D172_020285 385903c154ab9f0425d9ff9160f5073e 784 Pfam PF12801 4Fe-4S binding domain 536 579 1.4E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D172_020285 385903c154ab9f0425d9ff9160f5073e 784 Pfam PF12801 4Fe-4S binding domain 652 688 6.0E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D172_020285 385903c154ab9f0425d9ff9160f5073e 784 Gene3D G3DSA:3.30.70.20 679 765 6.9E-8 T 14-10-2018 D172_020285 385903c154ab9f0425d9ff9160f5073e 784 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 82 339 1.4E-34 T 14-10-2018 D172_020285 385903c154ab9f0425d9ff9160f5073e 784 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 195 204 1.1E-14 T 14-10-2018 D172_020285 385903c154ab9f0425d9ff9160f5073e 784 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 80 102 1.1E-14 T 14-10-2018 D172_020285 385903c154ab9f0425d9ff9160f5073e 784 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 257 1.1E-14 T 14-10-2018 D172_020285 385903c154ab9f0425d9ff9160f5073e 784 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 316 330 1.1E-14 T 14-10-2018 D172_020285 385903c154ab9f0425d9ff9160f5073e 784 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 728 739 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D172_020285 385903c154ab9f0425d9ff9160f5073e 784 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 81 100 1.2E-11 T 14-10-2018 D172_020285 385903c154ab9f0425d9ff9160f5073e 784 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 331 1.2E-11 T 14-10-2018 D172_020285 385903c154ab9f0425d9ff9160f5073e 784 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 250 1.2E-11 T 14-10-2018 D172_020285 385903c154ab9f0425d9ff9160f5073e 784 Gene3D G3DSA:3.50.50.60 80 339 2.3E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_020285 385903c154ab9f0425d9ff9160f5073e 784 SUPERFAMILY SSF51905 79 544 1.38E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_019810 3aa24348e273605e7ba36878159138e6 730 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 358 502 2.6E-35 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 D172_019810 3aa24348e273605e7ba36878159138e6 730 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 651 713 1.6E-11 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial D172_019810 3aa24348e273605e7ba36878159138e6 730 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 542 608 3.9E-15 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial D172_019810 3aa24348e273605e7ba36878159138e6 730 Gene3D G3DSA:3.10.170.10 207 359 3.8E-68 T 14-10-2018 D172_019810 3aa24348e273605e7ba36878159138e6 730 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 62 111 1.0E-10 T 14-10-2018 IPR011096 FTP domain D172_019810 3aa24348e273605e7ba36878159138e6 730 Pfam PF03413 Peptidase propeptide and YPEB domain 151 198 2.8E-7 T 14-10-2018 IPR025711 PepSY domain D172_019810 3aa24348e273605e7ba36878159138e6 730 Gene3D G3DSA:2.60.120.380 633 728 7.3E-31 T 14-10-2018 D172_019810 3aa24348e273605e7ba36878159138e6 730 Gene3D G3DSA:2.60.120.380 521 622 5.3E-36 T 14-10-2018 D172_019810 3aa24348e273605e7ba36878159138e6 730 Gene3D G3DSA:3.10.450.40 122 206 7.4E-29 T 14-10-2018 D172_019810 3aa24348e273605e7ba36878159138e6 730 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 346 362 1.6E-26 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D172_019810 3aa24348e273605e7ba36878159138e6 730 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 312 332 1.6E-26 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D172_019810 3aa24348e273605e7ba36878159138e6 730 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 367 378 1.6E-26 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D172_019810 3aa24348e273605e7ba36878159138e6 730 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 429 445 1.6E-26 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D172_019810 3aa24348e273605e7ba36878159138e6 730 Gene3D G3DSA:3.10.450.490 25 121 1.3E-42 T 14-10-2018 D172_019810 3aa24348e273605e7ba36878159138e6 730 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 217 355 1.1E-38 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 D172_019810 3aa24348e273605e7ba36878159138e6 730 Gene3D G3DSA:1.10.390.10 360 512 5.6E-52 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily D172_019810 3aa24348e273605e7ba36878159138e6 730 SUPERFAMILY SSF55486 208 503 3.66E-86 T 14-10-2018 D172_007845 85af29b500fdfd5fdd0a54cad3b021a5 460 SUPERFAMILY SSF51338 33 444 5.71E-24 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D172_007845 85af29b500fdfd5fdd0a54cad3b021a5 460 Gene3D G3DSA:2.30.40.10 51 438 1.5E-108 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D172_007845 85af29b500fdfd5fdd0a54cad3b021a5 460 Pfam PF01979 Amidohydrolase family 370 438 5.3E-10 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 D172_007845 85af29b500fdfd5fdd0a54cad3b021a5 460 SUPERFAMILY SSF51556 100 408 5.44E-26 T 14-10-2018 IPR032466 Metal-dependent hydrolase D172_007845 85af29b500fdfd5fdd0a54cad3b021a5 460 Gene3D G3DSA:3.20.20.140 101 404 1.5E-108 T 14-10-2018 D172_012835 5f7d2a999c2eaef503a336e7bdf31697 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D172_012835 5f7d2a999c2eaef503a336e7bdf31697 284 Gene3D G3DSA:3.40.50.720 6 259 1.4E-107 T 14-10-2018 D172_012835 5f7d2a999c2eaef503a336e7bdf31697 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 1.8E-68 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D172_012835 5f7d2a999c2eaef503a336e7bdf31697 284 SUPERFAMILY SSF53223 1 122 2.3E-39 T 14-10-2018 D172_012835 5f7d2a999c2eaef503a336e7bdf31697 284 Gene3D G3DSA:3.40.50.10860 8 276 1.4E-107 T 14-10-2018 D172_012835 5f7d2a999c2eaef503a336e7bdf31697 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 5.1E-39 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D172_012835 5f7d2a999c2eaef503a336e7bdf31697 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.097 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D172_012835 5f7d2a999c2eaef503a336e7bdf31697 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.4E-82 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D172_012835 5f7d2a999c2eaef503a336e7bdf31697 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.4E-82 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D172_012835 5f7d2a999c2eaef503a336e7bdf31697 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.4E-82 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D172_012835 5f7d2a999c2eaef503a336e7bdf31697 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.4E-82 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D172_012835 5f7d2a999c2eaef503a336e7bdf31697 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.4E-82 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D172_012835 5f7d2a999c2eaef503a336e7bdf31697 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.4E-82 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D172_012835 5f7d2a999c2eaef503a336e7bdf31697 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.4E-82 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 D172_012835 5f7d2a999c2eaef503a336e7bdf31697 284 SUPERFAMILY SSF51735 123 282 2.26E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_021050 2e0ebf3c253435b58e6ed9c7b609a2bd 461 Pfam PF16325 Peptidase family U32 C-terminal domain 364 445 7.3E-21 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal D172_021050 2e0ebf3c253435b58e6ed9c7b609a2bd 461 Gene3D G3DSA:2.40.30.10 360 446 8.8E-11 T 14-10-2018 D172_021050 2e0ebf3c253435b58e6ed9c7b609a2bd 461 ProSitePatterns PS01276 Peptidase family U32 signature. 170 188 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 D172_021050 2e0ebf3c253435b58e6ed9c7b609a2bd 461 Pfam PF01136 Peptidase family U32 86 349 2.6E-95 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 D172_017480 a75f4e00332110acc3762f1fbbc6b660 405 Pfam PF07690 Major Facilitator Superfamily 28 267 7.7E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_017480 a75f4e00332110acc3762f1fbbc6b660 405 Gene3D G3DSA:1.20.1250.20 13 206 1.0E-8 T 14-10-2018 D172_017480 a75f4e00332110acc3762f1fbbc6b660 405 Gene3D G3DSA:1.20.1250.20 212 405 7.3E-10 T 14-10-2018 D172_017480 a75f4e00332110acc3762f1fbbc6b660 405 SUPERFAMILY SSF103473 14 404 5.62E-26 T 14-10-2018 IPR036259 MFS transporter superfamily D172_012675 f719072f0e3f86941e54781bca0a2f27 242 Gene3D G3DSA:3.40.50.10490 8 219 5.4E-93 T 14-10-2018 D172_012675 f719072f0e3f86941e54781bca0a2f27 242 SUPERFAMILY SSF52313 6 230 5.62E-97 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily D172_012675 f719072f0e3f86941e54781bca0a2f27 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 1.3E-107 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_012675 f719072f0e3f86941e54781bca0a2f27 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 D172_012675 f719072f0e3f86941e54781bca0a2f27 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.733 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_012675 f719072f0e3f86941e54781bca0a2f27 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.0E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_012675 f719072f0e3f86941e54781bca0a2f27 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.0E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_012675 f719072f0e3f86941e54781bca0a2f27 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.0E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_012675 f719072f0e3f86941e54781bca0a2f27 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.0E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_012675 f719072f0e3f86941e54781bca0a2f27 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.0E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_012675 f719072f0e3f86941e54781bca0a2f27 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.0E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_012675 f719072f0e3f86941e54781bca0a2f27 242 Gene3D G3DSA:1.10.287.610 103 150 5.4E-93 T 14-10-2018 D172_012675 f719072f0e3f86941e54781bca0a2f27 242 Pfam PF00318 Ribosomal protein S2 9 224 1.0E-94 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_012675 f719072f0e3f86941e54781bca0a2f27 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 D172_008205 02a29fa2a7d5ed17988cbec9b2e78076 487 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 12 481 1.3E-139 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 D172_008205 02a29fa2a7d5ed17988cbec9b2e78076 487 Pfam PF03553 Na+/H+ antiporter family 169 476 8.2E-55 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 D172_018340 bf4935bd05c7f6fac05f476939a58646 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 426 1.9E-133 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 D172_018340 bf4935bd05c7f6fac05f476939a58646 433 PIRSF PIRSF006066 3 432 2.2E-154 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 D172_018340 bf4935bd05c7f6fac05f476939a58646 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 420 1.7E-117 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit D172_019680 5602e2f6b73ec6978a0d85d291cf1c47 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 D172_019680 5602e2f6b73ec6978a0d85d291cf1c47 335 SMART SM01329 5 331 1.3E-176 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 D172_019680 5602e2f6b73ec6978a0d85d291cf1c47 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 331 1.7E-106 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 D172_019680 5602e2f6b73ec6978a0d85d291cf1c47 335 SUPERFAMILY SSF53659 3 335 1.62E-123 T 14-10-2018 D172_019680 5602e2f6b73ec6978a0d85d291cf1c47 335 Gene3D G3DSA:3.40.718.10 1 335 1.7E-139 T 14-10-2018 D172_001070 d3025822f8ae1a9dfac80e8f1cb6b1bd 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.966 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 D172_001070 d3025822f8ae1a9dfac80e8f1cb6b1bd 233 SUPERFAMILY SSF54821 108 206 4.97E-40 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001070 d3025822f8ae1a9dfac80e8f1cb6b1bd 233 SUPERFAMILY SSF54814 2 106 1.26E-36 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 D172_001070 d3025822f8ae1a9dfac80e8f1cb6b1bd 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.6E-40 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001070 d3025822f8ae1a9dfac80e8f1cb6b1bd 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001070 d3025822f8ae1a9dfac80e8f1cb6b1bd 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 5.8E-98 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 D172_001070 d3025822f8ae1a9dfac80e8f1cb6b1bd 233 SMART SM00322 60 125 7.2E-8 T 14-10-2018 IPR004087 K Homology domain GO:0003676 D172_001070 d3025822f8ae1a9dfac80e8f1cb6b1bd 233 Gene3D G3DSA:3.30.300.20 17 107 8.9E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta D172_001070 d3025822f8ae1a9dfac80e8f1cb6b1bd 233 Gene3D G3DSA:3.30.1140.32 108 208 2.6E-44 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001070 d3025822f8ae1a9dfac80e8f1cb6b1bd 233 Pfam PF07650 KH domain 38 111 1.1E-19 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_014520 05a0465bf2492d5223402cfc1b4d9e01 928 Gene3D G3DSA:2.60.40.1120 32 108 1.7E-9 T 14-10-2018 D172_014520 05a0465bf2492d5223402cfc1b4d9e01 928 Pfam PF07715 TonB-dependent Receptor Plug Domain 135 238 8.5E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_014520 05a0465bf2492d5223402cfc1b4d9e01 928 SUPERFAMILY SSF49452 29 107 5.89E-11 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 D172_014520 05a0465bf2492d5223402cfc1b4d9e01 928 Gene3D G3DSA:2.170.130.10 118 242 1.6E-14 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_014520 05a0465bf2492d5223402cfc1b4d9e01 928 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 115 925 4.1E-170 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_014520 05a0465bf2492d5223402cfc1b4d9e01 928 Pfam PF13715 CarboxypepD_reg-like domain 33 120 5.0E-14 T 14-10-2018 D172_014520 05a0465bf2492d5223402cfc1b4d9e01 928 Gene3D G3DSA:2.40.170.20 334 926 1.1E-48 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_014520 05a0465bf2492d5223402cfc1b4d9e01 928 Pfam PF00593 TonB dependent receptor 501 926 7.4E-37 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_014520 05a0465bf2492d5223402cfc1b4d9e01 928 SUPERFAMILY SSF56935 110 925 8.7E-91 T 14-10-2018 D172_006640 53820b8f19e018262a952eb782d8eccd 205 SUPERFAMILY SSF47781 66 137 2.71E-20 T 14-10-2018 IPR010994 RuvA domain 2-like D172_006640 53820b8f19e018262a952eb782d8eccd 205 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 205 30.947 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 D172_006640 53820b8f19e018262a952eb782d8eccd 205 Gene3D G3DSA:1.10.150.20 67 142 1.8E-27 T 14-10-2018 D172_006640 53820b8f19e018262a952eb782d8eccd 205 SUPERFAMILY SSF50249 1 63 1.48E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_006640 53820b8f19e018262a952eb782d8eccd 205 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.9E-14 T 14-10-2018 D172_006640 53820b8f19e018262a952eb782d8eccd 205 Pfam PF01330 RuvA N terminal domain 1 62 6.0E-21 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 D172_006640 53820b8f19e018262a952eb782d8eccd 205 Pfam PF07499 RuvA, C-terminal domain 161 204 6.5E-16 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 D172_006640 53820b8f19e018262a952eb782d8eccd 205 Gene3D G3DSA:1.10.8.10 158 205 1.5E-17 T 14-10-2018 D172_006640 53820b8f19e018262a952eb782d8eccd 205 Gene3D G3DSA:2.40.50.140 1 66 1.1E-27 T 14-10-2018 D172_006640 53820b8f19e018262a952eb782d8eccd 205 SMART SM00278 73 92 39.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D172_006640 53820b8f19e018262a952eb782d8eccd 205 SMART SM00278 108 127 0.055 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D172_006640 53820b8f19e018262a952eb782d8eccd 205 SUPERFAMILY SSF46929 159 204 3.92E-11 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily D172_006640 53820b8f19e018262a952eb782d8eccd 205 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 205 2.1E-63 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 D172_000610 5785806e85024c87ffefec2f8c878603 241 SUPERFAMILY SSF46894 137 236 4.18E-31 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_000610 5785806e85024c87ffefec2f8c878603 241 SMART SM00862 160 235 2.5E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_000610 5785806e85024c87ffefec2f8c878603 241 Gene3D G3DSA:3.40.50.2300 5 140 4.8E-35 T 14-10-2018 D172_000610 5785806e85024c87ffefec2f8c878603 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 235 1.8E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_000610 5785806e85024c87ffefec2f8c878603 241 Gene3D G3DSA:1.10.10.10 141 241 7.6E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_000610 5785806e85024c87ffefec2f8c878603 241 SUPERFAMILY SSF52172 3 127 6.97E-37 T 14-10-2018 IPR011006 CheY-like superfamily D172_000610 5785806e85024c87ffefec2f8c878603 241 Pfam PF00072 Response regulator receiver domain 7 115 6.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_000610 5785806e85024c87ffefec2f8c878603 241 SMART SM00448 4 115 4.6E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_019535 f626e2428f687ca19db5d5bdde4f15a3 110 Pfam PF02810 SEC-C motif 93 110 5.0E-9 T 14-10-2018 IPR004027 SEC-C motif D172_019535 f626e2428f687ca19db5d5bdde4f15a3 110 Gene3D G3DSA:3.10.450.50 26 110 1.0E-10 T 14-10-2018 D172_019535 f626e2428f687ca19db5d5bdde4f15a3 110 TIGRFAM TIGR04102 SWIM_PBPRA1643: SWIM/SEC-C metal-binding motif protein, PBPRA1643 family 3 110 1.2E-45 T 14-10-2018 IPR026368 SWIM/SEC-C metal-binding motif protein, PBPRA1643 family D172_019535 f626e2428f687ca19db5d5bdde4f15a3 110 SUPERFAMILY SSF103642 91 110 3.43E-7 T 14-10-2018 D172_008720 999d54278f260f87e089a9647114d4f3 834 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 384 543 6.3E-17 T 14-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 D172_008720 999d54278f260f87e089a9647114d4f3 834 Gene3D G3DSA:2.140.10.30 360 569 2.0E-23 T 14-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily D172_008720 999d54278f260f87e089a9647114d4f3 834 Gene3D G3DSA:2.120.10.30 52 334 9.5E-7 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_008720 999d54278f260f87e089a9647114d4f3 834 Pfam PF00326 Prolyl oligopeptidase family 639 834 2.5E-42 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 D172_008720 999d54278f260f87e089a9647114d4f3 834 Gene3D G3DSA:3.40.50.1820 576 834 2.4E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_008720 999d54278f260f87e089a9647114d4f3 834 SUPERFAMILY SSF82171 57 571 3.66E-36 T 14-10-2018 D172_008720 999d54278f260f87e089a9647114d4f3 834 SUPERFAMILY SSF53474 581 834 4.21E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_017160 081a6cd4743138e451ca6f261d7c7817 379 SUPERFAMILY SSF55729 179 347 5.3E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_017160 081a6cd4743138e451ca6f261d7c7817 379 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 11 377 2.2E-148 T 14-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition D172_016965 a3d3c779f96087ced2e5892b1b4f86e3 336 SUPERFAMILY SSF51569 8 335 6.59E-146 T 14-10-2018 D172_016965 a3d3c779f96087ced2e5892b1b4f86e3 336 SMART SM01004 9 333 3.1E-249 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D172_016965 a3d3c779f96087ced2e5892b1b4f86e3 336 Gene3D G3DSA:3.20.20.70 3 336 5.9E-148 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_016965 a3d3c779f96087ced2e5892b1b4f86e3 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 7.9E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D172_016965 a3d3c779f96087ced2e5892b1b4f86e3 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 7.9E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D172_016965 a3d3c779f96087ced2e5892b1b4f86e3 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 7.9E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D172_016965 a3d3c779f96087ced2e5892b1b4f86e3 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 7.9E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D172_016965 a3d3c779f96087ced2e5892b1b4f86e3 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 7.9E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D172_016965 a3d3c779f96087ced2e5892b1b4f86e3 336 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 7.9E-58 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D172_016965 a3d3c779f96087ced2e5892b1b4f86e3 336 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D172_016965 a3d3c779f96087ced2e5892b1b4f86e3 336 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 331 2.3E-141 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D172_016965 a3d3c779f96087ced2e5892b1b4f86e3 336 PIRSF PIRSF001415 4 336 1.7E-151 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 D172_000240 c6af02ab9722b3e66c7048f919333b7a 77 Pfam PF00137 ATP synthase subunit C 10 73 4.0E-11 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 D172_000240 c6af02ab9722b3e66c7048f919333b7a 77 PRINTS PR00124 ATP synthase C subunit signature 11 30 3.2E-8 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000240 c6af02ab9722b3e66c7048f919333b7a 77 PRINTS PR00124 ATP synthase C subunit signature 32 47 3.2E-8 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000240 c6af02ab9722b3e66c7048f919333b7a 77 PRINTS PR00124 ATP synthase C subunit signature 49 74 3.2E-8 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000240 c6af02ab9722b3e66c7048f919333b7a 77 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000240 c6af02ab9722b3e66c7048f919333b7a 77 SUPERFAMILY SSF81333 2 75 4.18E-19 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily D172_000240 c6af02ab9722b3e66c7048f919333b7a 77 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 75 1.1E-26 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 D172_000240 c6af02ab9722b3e66c7048f919333b7a 77 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 14.272 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000240 c6af02ab9722b3e66c7048f919333b7a 77 Gene3D G3DSA:1.20.20.10 1 77 1.6E-27 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000345 35f1946a669bbdfec34033424c316d9d 525 SMART SM00028 242 275 0.68 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_000345 35f1946a669bbdfec34033424c316d9d 525 SMART SM00028 283 316 44.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_000345 35f1946a669bbdfec34033424c316d9d 525 SMART SM00028 326 359 100.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_000345 35f1946a669bbdfec34033424c316d9d 525 SMART SM00028 369 402 140.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_000345 35f1946a669bbdfec34033424c316d9d 525 SUPERFAMILY SSF48452 233 415 2.37E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_000345 35f1946a669bbdfec34033424c316d9d 525 Gene3D G3DSA:1.25.40.10 222 460 4.0E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_010240 7b1b0c82b1874a9b1abb565ac09c3065 424 Gene3D G3DSA:1.20.1250.20 232 419 3.0E-61 T 14-10-2018 D172_010240 7b1b0c82b1874a9b1abb565ac09c3065 424 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 105 410 3.5E-126 T 14-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 D172_010240 7b1b0c82b1874a9b1abb565ac09c3065 424 Gene3D G3DSA:1.20.1250.20 19 227 2.7E-58 T 14-10-2018 D172_010240 7b1b0c82b1874a9b1abb565ac09c3065 424 Pfam PF07690 Major Facilitator Superfamily 31 369 1.6E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_010240 7b1b0c82b1874a9b1abb565ac09c3065 424 SUPERFAMILY SSF103473 19 412 5.75E-43 T 14-10-2018 IPR036259 MFS transporter superfamily D172_012345 fbbe52e4e297a6d34167905eb89034a6 147 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.1E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_012345 fbbe52e4e297a6d34167905eb89034a6 147 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.1E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_012345 fbbe52e4e297a6d34167905eb89034a6 147 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.1E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_012345 fbbe52e4e297a6d34167905eb89034a6 147 SMART SM00422 1 70 1.3E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_012345 fbbe52e4e297a6d34167905eb89034a6 147 SUPERFAMILY SSF46955 1 113 8.06E-27 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily D172_012345 fbbe52e4e297a6d34167905eb89034a6 147 Gene3D G3DSA:1.10.1660.10 1 124 5.8E-29 T 14-10-2018 D172_012345 fbbe52e4e297a6d34167905eb89034a6 147 Pfam PF13411 MerR HTH family regulatory protein 3 67 5.8E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_001340 b17fa6466932979483b85976fe7303f1 710 SUPERFAMILY SSF51445 297 628 8.43E-102 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_001340 b17fa6466932979483b85976fe7303f1 710 Gene3D G3DSA:2.70.98.60 2 281 3.6E-48 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 D172_001340 b17fa6466932979483b85976fe7303f1 710 Pfam PF02065 Melibiase 261 601 8.9E-127 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 D172_001340 b17fa6466932979483b85976fe7303f1 710 PRINTS PR00743 Glycosyl hydrolase family 36 signature 213 228 1.2E-52 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 D172_001340 b17fa6466932979483b85976fe7303f1 710 PRINTS PR00743 Glycosyl hydrolase family 36 signature 302 316 1.2E-52 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 D172_001340 b17fa6466932979483b85976fe7303f1 710 PRINTS PR00743 Glycosyl hydrolase family 36 signature 439 454 1.2E-52 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 D172_001340 b17fa6466932979483b85976fe7303f1 710 PRINTS PR00743 Glycosyl hydrolase family 36 signature 330 345 1.2E-52 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 D172_001340 b17fa6466932979483b85976fe7303f1 710 PRINTS PR00743 Glycosyl hydrolase family 36 signature 488 504 1.2E-52 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 D172_001340 b17fa6466932979483b85976fe7303f1 710 PRINTS PR00743 Glycosyl hydrolase family 36 signature 513 529 1.2E-52 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 D172_001340 b17fa6466932979483b85976fe7303f1 710 PRINTS PR00743 Glycosyl hydrolase family 36 signature 380 402 1.2E-52 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 D172_001340 b17fa6466932979483b85976fe7303f1 710 PRINTS PR00743 Glycosyl hydrolase family 36 signature 264 284 1.2E-52 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 D172_001340 b17fa6466932979483b85976fe7303f1 710 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 25 255 2.2E-38 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 D172_001340 b17fa6466932979483b85976fe7303f1 710 Gene3D G3DSA:2.60.40.1180 603 709 9.9E-7 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta D172_001340 b17fa6466932979483b85976fe7303f1 710 PIRSF PIRSF005536 2 668 7.3E-203 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 D172_001340 b17fa6466932979483b85976fe7303f1 710 Gene3D G3DSA:3.20.20.70 282 600 3.4E-124 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_001340 b17fa6466932979483b85976fe7303f1 710 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 620 706 3.5E-11 T 14-10-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 D172_002135 8c89a7cc7bcbd07908cc1bfe15b947aa 427 Gene3D G3DSA:3.30.1490.20 121 190 2.1E-28 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D172_002135 8c89a7cc7bcbd07908cc1bfe15b947aa 427 SMART SM01209 103 296 1.1E-138 T 14-10-2018 D172_002135 8c89a7cc7bcbd07908cc1bfe15b947aa 427 SUPERFAMILY SSF52440 1 103 2.59E-35 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily D172_002135 8c89a7cc7bcbd07908cc1bfe15b947aa 427 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 42.907 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D172_002135 8c89a7cc7bcbd07908cc1bfe15b947aa 427 SUPERFAMILY SSF56059 104 314 4.77E-65 T 14-10-2018 D172_002135 8c89a7cc7bcbd07908cc1bfe15b947aa 427 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 2.4E-32 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D172_002135 8c89a7cc7bcbd07908cc1bfe15b947aa 427 SMART SM01210 330 423 2.5E-54 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D172_002135 8c89a7cc7bcbd07908cc1bfe15b947aa 427 Gene3D G3DSA:3.30.470.20 191 329 3.2E-58 T 14-10-2018 D172_002135 8c89a7cc7bcbd07908cc1bfe15b947aa 427 Gene3D G3DSA:3.90.600.10 330 427 6.0E-35 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D172_002135 8c89a7cc7bcbd07908cc1bfe15b947aa 427 SUPERFAMILY SSF51246 329 424 8.63E-33 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 D172_002135 8c89a7cc7bcbd07908cc1bfe15b947aa 427 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 4.4E-31 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D172_002135 8c89a7cc7bcbd07908cc1bfe15b947aa 427 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 8.7E-177 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D172_002135 8c89a7cc7bcbd07908cc1bfe15b947aa 427 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D172_002135 8c89a7cc7bcbd07908cc1bfe15b947aa 427 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 3.8E-82 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D172_002135 8c89a7cc7bcbd07908cc1bfe15b947aa 427 Gene3D G3DSA:3.40.50.20 2 95 4.6E-35 T 14-10-2018 D172_000185 092f324ed49eb58150fbb6a3f99c232f 140 Gene3D G3DSA:3.30.230.10 1 118 3.7E-39 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D172_000185 092f324ed49eb58150fbb6a3f99c232f 140 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 7 113 4.5E-28 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 D172_000185 092f324ed49eb58150fbb6a3f99c232f 140 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.327 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 D172_000185 092f324ed49eb58150fbb6a3f99c232f 140 SUPERFAMILY SSF54211 5 113 6.32E-29 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_000185 092f324ed49eb58150fbb6a3f99c232f 140 Pfam PF00825 Ribonuclease P 6 112 3.1E-31 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 D172_000185 092f324ed49eb58150fbb6a3f99c232f 140 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 105 7.0E-44 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 D172_000185 092f324ed49eb58150fbb6a3f99c232f 140 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 D172_006195 d89d15832013c774f1a43bfc6b07b99d 818 Gene3D G3DSA:2.40.110.10 236 359 1.8E-96 T 14-10-2018 D172_006195 d89d15832013c774f1a43bfc6b07b99d 818 Pfam PF09317 Domain of unknown function (DUF1974) 514 796 9.0E-106 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 D172_006195 d89d15832013c774f1a43bfc6b07b99d 818 Gene3D G3DSA:1.10.540.10 123 235 1.8E-96 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 D172_006195 d89d15832013c774f1a43bfc6b07b99d 818 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 507 7.6E-13 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 D172_006195 d89d15832013c774f1a43bfc6b07b99d 818 Gene3D G3DSA:1.20.140.10 360 507 1.8E-96 T 14-10-2018 D172_006195 d89d15832013c774f1a43bfc6b07b99d 818 SUPERFAMILY SSF47203 360 507 1.3E-22 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 D172_006195 d89d15832013c774f1a43bfc6b07b99d 818 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 1.9E-8 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 D172_006195 d89d15832013c774f1a43bfc6b07b99d 818 SUPERFAMILY SSF56645 125 355 3.27E-43 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 D172_006195 d89d15832013c774f1a43bfc6b07b99d 818 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 140 232 1.9E-16 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 D172_012670 11096cb1a91e1c3c1415cf98c40a3f5e 283 Gene3D G3DSA:1.10.286.20 184 223 1.1E-22 T 14-10-2018 D172_012670 11096cb1a91e1c3c1415cf98c40a3f5e 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 277 75.493 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D172_012670 11096cb1a91e1c3c1415cf98c40a3f5e 283 SUPERFAMILY SSF54713 141 277 1.78E-48 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 D172_012670 11096cb1a91e1c3c1415cf98c40a3f5e 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D172_012670 11096cb1a91e1c3c1415cf98c40a3f5e 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D172_012670 11096cb1a91e1c3c1415cf98c40a3f5e 283 SUPERFAMILY SSF54713 55 136 5.89E-18 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 D172_012670 11096cb1a91e1c3c1415cf98c40a3f5e 283 Pfam PF00889 Elongation factor TS 70 260 3.8E-59 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 D172_012670 11096cb1a91e1c3c1415cf98c40a3f5e 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 277 7.3E-105 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D172_012670 11096cb1a91e1c3c1415cf98c40a3f5e 283 Gene3D G3DSA:1.10.8.10 1 55 1.1E-25 T 14-10-2018 D172_012670 11096cb1a91e1c3c1415cf98c40a3f5e 283 SUPERFAMILY SSF46934 3 53 2.45E-18 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 D172_012670 11096cb1a91e1c3c1415cf98c40a3f5e 283 Gene3D G3DSA:3.30.479.20 56 139 1.4E-25 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 D172_018710 e7f778fe38c698c7b2e556ffe293195c 156 Gene3D G3DSA:3.30.160.70 1 69 3.9E-10 T 14-10-2018 D172_018710 e7f778fe38c698c7b2e556ffe293195c 156 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 74 153 1.5E-36 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 D172_018710 e7f778fe38c698c7b2e556ffe293195c 156 SUPERFAMILY SSF46767 73 155 1.16E-31 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 D172_018710 e7f778fe38c698c7b2e556ffe293195c 156 SUPERFAMILY SSF53155 4 78 2.55E-13 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 D172_018710 e7f778fe38c698c7b2e556ffe293195c 156 Gene3D G3DSA:1.10.10.10 70 155 3.4E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_018710 e7f778fe38c698c7b2e556ffe293195c 156 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 76 154 2.0E-32 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 D172_018710 e7f778fe38c698c7b2e556ffe293195c 156 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 124 130 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 D172_018710 e7f778fe38c698c7b2e556ffe293195c 156 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 154 38.565 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 D172_003390 5631cf6d429779b92700e18a5ddc3890 452 Pfam PF00571 CBS domain 203 257 1.6E-8 T 14-10-2018 IPR000644 CBS domain D172_003390 5631cf6d429779b92700e18a5ddc3890 452 Pfam PF00571 CBS domain 139 195 5.2E-4 T 14-10-2018 IPR000644 CBS domain D172_003390 5631cf6d429779b92700e18a5ddc3890 452 Gene3D G3DSA:3.10.580.10 135 262 5.4E-39 T 14-10-2018 D172_003390 5631cf6d429779b92700e18a5ddc3890 452 Gene3D G3DSA:1.10.357.20 277 452 3.5E-43 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain D172_003390 5631cf6d429779b92700e18a5ddc3890 452 Gene3D G3DSA:1.25.60.10 11 134 2.3E-14 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily D172_003390 5631cf6d429779b92700e18a5ddc3890 452 Pfam PF01769 Divalent cation transporter 328 444 9.8E-21 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 D172_003390 5631cf6d429779b92700e18a5ddc3890 452 SUPERFAMILY SSF54631 139 278 9.98E-30 T 14-10-2018 D172_003390 5631cf6d429779b92700e18a5ddc3890 452 Pfam PF03448 MgtE intracellular N domain 38 136 1.9E-21 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain D172_003390 5631cf6d429779b92700e18a5ddc3890 452 SMART SM00116 210 258 2.3E-6 T 14-10-2018 IPR000644 CBS domain D172_003390 5631cf6d429779b92700e18a5ddc3890 452 SMART SM00116 146 199 31.0 T 14-10-2018 IPR000644 CBS domain D172_003390 5631cf6d429779b92700e18a5ddc3890 452 SUPERFAMILY SSF161093 280 451 1.31E-42 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 D172_003390 5631cf6d429779b92700e18a5ddc3890 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 452 7.1E-85 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 D172_003390 5631cf6d429779b92700e18a5ddc3890 452 SMART SM00924 36 139 1.3E-32 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain D172_003390 5631cf6d429779b92700e18a5ddc3890 452 SUPERFAMILY SSF158791 13 136 2.35E-28 T 14-10-2018 D172_016980 f55d9d6144850e4c18c5aaffcfee1641 653 Pfam PF00535 Glycosyl transferase family 2 112 293 7.5E-11 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D172_016980 f55d9d6144850e4c18c5aaffcfee1641 653 Gene3D G3DSA:3.90.550.10 105 338 1.1E-15 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_016980 f55d9d6144850e4c18c5aaffcfee1641 653 SUPERFAMILY SSF53448 110 398 1.13E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_011090 5966de93d68275834e71db88f2f7c3d7 419 Gene3D G3DSA:1.25.40.10 303 414 9.0E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_011090 5966de93d68275834e71db88f2f7c3d7 419 SUPERFAMILY SSF48452 55 147 2.33E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_011090 5966de93d68275834e71db88f2f7c3d7 419 Gene3D G3DSA:1.25.40.10 201 302 3.9E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_011090 5966de93d68275834e71db88f2f7c3d7 419 Gene3D G3DSA:1.25.40.10 40 114 6.0E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_011090 5966de93d68275834e71db88f2f7c3d7 419 SUPERFAMILY SSF48452 124 392 4.68E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_011090 5966de93d68275834e71db88f2f7c3d7 419 Gene3D G3DSA:1.25.40.10 119 200 2.0E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_011090 5966de93d68275834e71db88f2f7c3d7 419 SMART SM00028 157 190 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_011090 5966de93d68275834e71db88f2f7c3d7 419 SMART SM00028 330 363 21.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_011090 5966de93d68275834e71db88f2f7c3d7 419 SMART SM00028 84 117 53.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_011090 5966de93d68275834e71db88f2f7c3d7 419 SMART SM00028 122 155 400.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_011090 5966de93d68275834e71db88f2f7c3d7 419 SMART SM00028 365 397 89.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_012870 002b822c0f057cfa94053dea5231e698 508 Pfam PF00156 Phosphoribosyl transferase domain 283 392 4.4E-7 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 D172_012870 002b822c0f057cfa94053dea5231e698 508 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 5.7E-156 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 D172_012870 002b822c0f057cfa94053dea5231e698 508 Gene3D G3DSA:3.60.20.10 2 412 1.1E-151 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_012870 002b822c0f057cfa94053dea5231e698 508 Gene3D G3DSA:3.40.50.2020 277 441 1.1E-151 T 14-10-2018 D172_012870 002b822c0f057cfa94053dea5231e698 508 Pfam PF13522 Glutamine amidotransferase domain 63 208 7.8E-16 T 14-10-2018 D172_012870 002b822c0f057cfa94053dea5231e698 508 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 464 44.193 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 D172_012870 002b822c0f057cfa94053dea5231e698 508 PIRSF PIRSF000485 1 481 1.4E-162 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 D172_012870 002b822c0f057cfa94053dea5231e698 508 SUPERFAMILY SSF56235 2 257 3.09E-69 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_012870 002b822c0f057cfa94053dea5231e698 508 SUPERFAMILY SSF53271 250 483 3.02E-68 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like D172_008575 14ecb57ada06008e77aafbd0403a0447 287 Pfam PF01435 Peptidase family M48 78 287 5.1E-40 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 D172_008575 14ecb57ada06008e77aafbd0403a0447 287 Hamap MF_00188 Protease HtpX [htpX]. 1 287 24.291 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 D172_008575 14ecb57ada06008e77aafbd0403a0447 287 Gene3D G3DSA:3.30.2010.10 68 161 2.6E-35 T 14-10-2018 D172_015505 77b9c580322b36b1ed4f5686b525221d 405 SUPERFAMILY SSF53383 5 392 1.04E-111 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_015505 77b9c580322b36b1ed4f5686b525221d 405 Gene3D G3DSA:3.90.1150.10 5 377 9.2E-164 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_015505 77b9c580322b36b1ed4f5686b525221d 405 Pfam PF00266 Aminotransferase class-V 5 369 3.8E-92 T 14-10-2018 IPR000192 Aminotransferase class V domain D172_015505 77b9c580322b36b1ed4f5686b525221d 405 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site D172_015505 77b9c580322b36b1ed4f5686b525221d 405 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 405 1.4E-222 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 D172_015505 77b9c580322b36b1ed4f5686b525221d 405 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 396 53.397 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 D172_015505 77b9c580322b36b1ed4f5686b525221d 405 Gene3D G3DSA:3.40.640.10 16 262 9.2E-164 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_015505 77b9c580322b36b1ed4f5686b525221d 405 PIRSF PIRSF005572 2 385 2.3E-136 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 D172_009725 bcbc0c16b08d287f463379edd1fee5b8 311 Gene3D G3DSA:1.20.1640.10 111 299 5.0E-10 T 14-10-2018 D172_009725 bcbc0c16b08d287f463379edd1fee5b8 311 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 114 279 4.4E-47 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D172_009725 bcbc0c16b08d287f463379edd1fee5b8 311 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 9 293 22.467 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 D172_009725 bcbc0c16b08d287f463379edd1fee5b8 311 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 37 282 4.0E-65 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 D172_009725 bcbc0c16b08d287f463379edd1fee5b8 311 Pfam PF02355 Protein export membrane protein 106 285 9.6E-57 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial D172_009725 bcbc0c16b08d287f463379edd1fee5b8 311 SUPERFAMILY SSF82866 104 289 6.15E-33 T 14-10-2018 D172_009725 bcbc0c16b08d287f463379edd1fee5b8 311 PRINTS PR01755 Bacterial translocase SecF protein signature 196 214 1.3E-27 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D172_009725 bcbc0c16b08d287f463379edd1fee5b8 311 PRINTS PR01755 Bacterial translocase SecF protein signature 36 51 1.3E-27 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D172_009725 bcbc0c16b08d287f463379edd1fee5b8 311 PRINTS PR01755 Bacterial translocase SecF protein signature 148 162 1.3E-27 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D172_009725 bcbc0c16b08d287f463379edd1fee5b8 311 PRINTS PR01755 Bacterial translocase SecF protein signature 230 245 1.3E-27 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D172_009725 bcbc0c16b08d287f463379edd1fee5b8 311 Pfam PF07549 SecD/SecF GG Motif 33 58 5.1E-6 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site D172_020580 6ebd847fefca493978e72cd7e704ba36 404 Pfam PF01546 Peptidase family M20/M25/M40 84 394 3.3E-33 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 D172_020580 6ebd847fefca493978e72cd7e704ba36 404 Gene3D G3DSA:3.40.630.10 27 386 1.3E-105 T 14-10-2018 D172_020580 6ebd847fefca493978e72cd7e704ba36 404 SUPERFAMILY SSF55031 198 304 3.89E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain D172_020580 6ebd847fefca493978e72cd7e704ba36 404 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 81 90 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 D172_020580 6ebd847fefca493978e72cd7e704ba36 404 Gene3D G3DSA:3.30.70.360 198 311 1.3E-105 T 14-10-2018 D172_020580 6ebd847fefca493978e72cd7e704ba36 404 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 117 154 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 D172_020580 6ebd847fefca493978e72cd7e704ba36 404 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 24 397 9.2E-111 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 D172_020580 6ebd847fefca493978e72cd7e704ba36 404 Pfam PF07687 Peptidase dimerisation domain 194 296 1.3E-18 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain D172_020580 6ebd847fefca493978e72cd7e704ba36 404 SUPERFAMILY SSF53187 16 398 7.93E-58 T 14-10-2018 D172_019950 277d14997339f3c811d97fc06873dc52 175 Pfam PF01618 MotA/TolQ/ExbB proton channel family 56 168 5.0E-23 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel D172_018155 75a40b771af6b594bb474fffb00e7140 300 SUPERFAMILY SSF46785 3 85 1.72E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_018155 75a40b771af6b594bb474fffb00e7140 300 Gene3D G3DSA:1.10.10.10 2 89 1.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_018155 75a40b771af6b594bb474fffb00e7140 300 Pfam PF03466 LysR substrate binding domain 89 295 1.1E-32 T 14-10-2018 IPR005119 LysR, substrate-binding D172_018155 75a40b771af6b594bb474fffb00e7140 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.8E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_018155 75a40b771af6b594bb474fffb00e7140 300 Gene3D G3DSA:3.40.190.290 91 294 8.7E-57 T 14-10-2018 D172_018155 75a40b771af6b594bb474fffb00e7140 300 SUPERFAMILY SSF53850 89 296 4.89E-37 T 14-10-2018 D172_004010 f7878ca1b5700867c401d80d7a0ada6f 503 Gene3D G3DSA:3.40.630.10 181 496 1.3E-137 T 14-10-2018 D172_004010 f7878ca1b5700867c401d80d7a0ada6f 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 3.9E-32 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D172_004010 f7878ca1b5700867c401d80d7a0ada6f 503 Gene3D G3DSA:3.40.220.10 1 159 2.2E-57 T 14-10-2018 D172_004010 f7878ca1b5700867c401d80d7a0ada6f 503 PRINTS PR00481 Cytosol aminopeptidase signature 285 306 1.5E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_004010 f7878ca1b5700867c401d80d7a0ada6f 503 PRINTS PR00481 Cytosol aminopeptidase signature 263 280 1.5E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_004010 f7878ca1b5700867c401d80d7a0ada6f 503 PRINTS PR00481 Cytosol aminopeptidase signature 322 343 1.5E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_004010 f7878ca1b5700867c401d80d7a0ada6f 503 PRINTS PR00481 Cytosol aminopeptidase signature 344 364 1.5E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_004010 f7878ca1b5700867c401d80d7a0ada6f 503 PRINTS PR00481 Cytosol aminopeptidase signature 372 387 1.5E-55 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_004010 f7878ca1b5700867c401d80d7a0ada6f 503 SUPERFAMILY SSF53187 180 494 4.39E-124 T 14-10-2018 D172_004010 f7878ca1b5700867c401d80d7a0ada6f 503 SUPERFAMILY SSF52949 1 183 7.06E-49 T 14-10-2018 D172_004010 f7878ca1b5700867c401d80d7a0ada6f 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 487 6.0E-124 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D172_004010 f7878ca1b5700867c401d80d7a0ada6f 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 496 40.257 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 D172_004010 f7878ca1b5700867c401d80d7a0ada6f 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 348 355 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D172_001945 9db73c70f7d5fe88229cceff14e877e7 168 Gene3D G3DSA:3.30.70.260 82 168 2.2E-17 T 14-10-2018 D172_001945 9db73c70f7d5fe88229cceff14e877e7 168 SUPERFAMILY SSF55021 88 163 7.4E-10 T 14-10-2018 D172_001945 9db73c70f7d5fe88229cceff14e877e7 168 Gene3D G3DSA:3.30.70.260 1 77 1.8E-16 T 14-10-2018 D172_001945 9db73c70f7d5fe88229cceff14e877e7 168 Pfam PF13740 ACT domain 3 68 2.1E-13 T 14-10-2018 D172_001945 9db73c70f7d5fe88229cceff14e877e7 168 PIRSF PIRSF028103 1 167 4.0E-38 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 D172_001945 9db73c70f7d5fe88229cceff14e877e7 168 SUPERFAMILY SSF55021 2 68 1.37E-11 T 14-10-2018 D172_010960 2c5dfff0ac7ef604a3ac01e20b3b3035 402 Pfam PF02687 FtsX-like permease family 309 395 7.6E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 D172_008920 01202626dc8d75b3d001042e112d2e8e 344 Gene3D G3DSA:3.20.20.210 1 343 6.4E-134 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 D172_008920 01202626dc8d75b3d001042e112d2e8e 344 PIRSF PIRSF005632 1 344 2.1E-196 T 14-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit D172_008920 01202626dc8d75b3d001042e112d2e8e 344 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 3.3E-35 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 D172_008920 01202626dc8d75b3d001042e112d2e8e 344 SUPERFAMILY SSF51726 7 342 3.4E-69 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 D172_003945 90edacf925161de0e5e731ca7631a0a9 459 Gene3D G3DSA:1.10.860.10 6 170 9.8E-55 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal D172_003945 90edacf925161de0e5e731ca7631a0a9 459 Pfam PF00772 DnaB-like helicase N terminal domain 14 115 2.5E-37 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 D172_003945 90edacf925161de0e5e731ca7631a0a9 459 Gene3D G3DSA:3.40.50.300 171 450 7.5E-107 T 14-10-2018 D172_003945 90edacf925161de0e5e731ca7631a0a9 459 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 14 451 8.1E-178 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 D172_003945 90edacf925161de0e5e731ca7631a0a9 459 SUPERFAMILY SSF48024 12 123 1.31E-38 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 D172_003945 90edacf925161de0e5e731ca7631a0a9 459 Pfam PF03796 DnaB-like helicase C terminal domain 193 449 3.4E-112 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 D172_003945 90edacf925161de0e5e731ca7631a0a9 459 SUPERFAMILY SSF52540 191 442 1.55E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_013540 92f698ae1b2534040ff1afedf16b6bba 143 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site D172_013540 92f698ae1b2534040ff1afedf16b6bba 143 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 95 138 2.7E-12 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D172_013540 92f698ae1b2534040ff1afedf16b6bba 143 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 142 3.1E-50 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 D172_013540 92f698ae1b2534040ff1afedf16b6bba 143 Pfam PF00460 Flagella basal body rod protein 7 33 9.7E-8 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 D172_005685 626a60c91fc538a30ca38d1ea5227462 512 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 3 264 1.1E-72 T 14-10-2018 IPR018712 Domain of unknown function DUF2235 D172_011520 3af176bc5803b232ca949912ee8edb84 213 Pfam PF04205 FMN-binding domain 101 189 2.4E-17 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 D172_011520 3af176bc5803b232ca949912ee8edb84 213 SMART SM00900 101 193 4.9E-28 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 D172_011520 3af176bc5803b232ca949912ee8edb84 213 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 3 195 24.447 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 D172_011520 3af176bc5803b232ca949912ee8edb84 213 PIRSF PIRSF006091 1 207 1.3E-69 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 D172_011520 3af176bc5803b232ca949912ee8edb84 213 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 11 194 2.6E-58 T 14-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 D172_006830 283f98d651e602cd313f3a28afe5cffd 310 Gene3D G3DSA:3.40.50.12370 1 308 2.6E-112 T 14-10-2018 D172_006830 283f98d651e602cd313f3a28afe5cffd 310 Pfam PF00582 Universal stress protein family 4 144 1.8E-18 T 14-10-2018 IPR006016 UspA D172_006830 283f98d651e602cd313f3a28afe5cffd 310 Pfam PF00582 Universal stress protein family 173 297 9.6E-14 T 14-10-2018 IPR006016 UspA D172_006830 283f98d651e602cd313f3a28afe5cffd 310 SUPERFAMILY SSF52402 153 304 5.27E-22 T 14-10-2018 D172_006830 283f98d651e602cd313f3a28afe5cffd 310 SUPERFAMILY SSF52402 4 153 6.28E-28 T 14-10-2018 D172_005240 328051e0694e6364ceb96a2bcd2694e8 193 SUPERFAMILY SSF144091 15 189 5.75E-30 T 14-10-2018 D172_005240 328051e0694e6364ceb96a2bcd2694e8 193 Gene3D G3DSA:1.20.1540.10 9 191 2.2E-14 T 14-10-2018 IPR035952 Rhomboid-like superfamily D172_005240 328051e0694e6364ceb96a2bcd2694e8 193 Pfam PF01694 Rhomboid family 54 187 2.6E-21 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 D172_011165 5938f43cd79ff050233d671c275ec180 1059 SUPERFAMILY SSF82171 137 556 1.26E-50 T 14-10-2018 D172_011165 5938f43cd79ff050233d671c275ec180 1059 Gene3D G3DSA:2.30.40.10 1013 1035 1.5E-20 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D172_011165 5938f43cd79ff050233d671c275ec180 1059 Gene3D G3DSA:2.30.40.10 655 707 1.2E-23 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D172_011165 5938f43cd79ff050233d671c275ec180 1059 SUPERFAMILY SSF51556 707 1002 1.36E-42 T 14-10-2018 IPR032466 Metal-dependent hydrolase D172_011165 5938f43cd79ff050233d671c275ec180 1059 SUPERFAMILY SSF51338 638 1037 8.44E-19 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D172_011165 5938f43cd79ff050233d671c275ec180 1059 Gene3D G3DSA:3.20.20.140 852 1012 1.5E-20 T 14-10-2018 D172_011165 5938f43cd79ff050233d671c275ec180 1059 Gene3D G3DSA:3.20.20.140 708 780 1.2E-23 T 14-10-2018 D172_011165 5938f43cd79ff050233d671c275ec180 1059 Gene3D G3DSA:2.120.10.30 283 562 2.5E-27 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_011165 5938f43cd79ff050233d671c275ec180 1059 Pfam PF01979 Amidohydrolase family 973 1037 9.2E-16 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 D172_011165 5938f43cd79ff050233d671c275ec180 1059 SUPERFAMILY SSF82171 46 150 1.69E-17 T 14-10-2018 D172_011165 5938f43cd79ff050233d671c275ec180 1059 Gene3D G3DSA:2.120.10.30 30 221 4.3E-35 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_011165 5938f43cd79ff050233d671c275ec180 1059 Pfam PF07676 WD40-like Beta Propeller Repeat 189 207 0.007 T 14-10-2018 IPR011659 WD40-like Beta Propeller D172_011165 5938f43cd79ff050233d671c275ec180 1059 Pfam PF07676 WD40-like Beta Propeller Repeat 537 556 0.017 T 14-10-2018 IPR011659 WD40-like Beta Propeller D172_011165 5938f43cd79ff050233d671c275ec180 1059 Pfam PF07676 WD40-like Beta Propeller Repeat 442 463 0.0027 T 14-10-2018 IPR011659 WD40-like Beta Propeller D172_011165 5938f43cd79ff050233d671c275ec180 1059 Pfam PF07676 WD40-like Beta Propeller Repeat 91 117 2.4E-8 T 14-10-2018 IPR011659 WD40-like Beta Propeller D172_019510 fd7dc3ecc0cb1bcb6755b92a9d8b91ff 433 Gene3D G3DSA:2.160.10.10 293 424 2.9E-38 T 14-10-2018 D172_019510 fd7dc3ecc0cb1bcb6755b92a9d8b91ff 433 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 22 41 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 D172_019510 fd7dc3ecc0cb1bcb6755b92a9d8b91ff 433 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 207 217 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 D172_019510 fd7dc3ecc0cb1bcb6755b92a9d8b91ff 433 SUPERFAMILY SSF53448 13 369 1.53E-74 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_019510 fd7dc3ecc0cb1bcb6755b92a9d8b91ff 433 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 17 389 1.9E-148 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 D172_019510 fd7dc3ecc0cb1bcb6755b92a9d8b91ff 433 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 13 416 48.541 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 D172_019510 fd7dc3ecc0cb1bcb6755b92a9d8b91ff 433 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 108 116 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 D172_019510 fd7dc3ecc0cb1bcb6755b92a9d8b91ff 433 Gene3D G3DSA:3.90.550.10 4 292 7.1E-85 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_019510 fd7dc3ecc0cb1bcb6755b92a9d8b91ff 433 SUPERFAMILY SSF51161 302 414 1.05E-17 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily D172_019510 fd7dc3ecc0cb1bcb6755b92a9d8b91ff 433 Pfam PF00483 Nucleotidyl transferase 18 282 2.9E-64 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 D172_018040 bd113ea01b8d11be6f6b8a643485433b 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 29 53 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 D172_018040 bd113ea01b8d11be6f6b8a643485433b 315 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 D172_018040 bd113ea01b8d11be6f6b8a643485433b 315 Pfam PF00294 pfkB family carbohydrate kinase 1 308 1.6E-51 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB D172_018040 bd113ea01b8d11be6f6b8a643485433b 315 SUPERFAMILY SSF53613 1 314 6.55E-69 T 14-10-2018 IPR029056 Ribokinase-like D172_018040 bd113ea01b8d11be6f6b8a643485433b 315 Gene3D G3DSA:3.40.1190.20 2 315 8.1E-83 T 14-10-2018 IPR029056 Ribokinase-like D172_000435 6fa89ccba7a3fb46744e60185a6887c9 799 Gene3D G3DSA:2.170.130.10 112 229 4.5E-30 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_000435 6fa89ccba7a3fb46744e60185a6887c9 799 Pfam PF13620 Carboxypeptidase regulatory-like domain 23 99 4.1E-13 T 14-10-2018 D172_000435 6fa89ccba7a3fb46744e60185a6887c9 799 Pfam PF00593 TonB dependent receptor 357 796 3.7E-38 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_000435 6fa89ccba7a3fb46744e60185a6887c9 799 Pfam PF07715 TonB-dependent Receptor Plug Domain 118 222 6.4E-20 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_000435 6fa89ccba7a3fb46744e60185a6887c9 799 SUPERFAMILY SSF49464 23 103 4.32E-15 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily D172_000435 6fa89ccba7a3fb46744e60185a6887c9 799 Gene3D G3DSA:2.60.40.1120 24 101 6.5E-13 T 14-10-2018 D172_000435 6fa89ccba7a3fb46744e60185a6887c9 799 SUPERFAMILY SSF56935 105 797 1.49E-94 T 14-10-2018 D172_005965 92a660ea11c44f0c6493915fadcf9c03 164 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 111 121 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 D172_005965 92a660ea11c44f0c6493915fadcf9c03 164 Pfam PF00782 Dual specificity phosphatase, catalytic domain 58 148 6.4E-10 T 14-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 D172_005965 92a660ea11c44f0c6493915fadcf9c03 164 SUPERFAMILY SSF52799 15 158 4.76E-26 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like D172_005965 92a660ea11c44f0c6493915fadcf9c03 164 Gene3D G3DSA:3.90.190.10 4 164 2.5E-25 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like D172_014035 9fbb089a2f81131ea661d648158f5de2 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 182 2.0E-48 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 D172_014035 9fbb089a2f81131ea661d648158f5de2 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 191 19.114 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 D172_014035 9fbb089a2f81131ea661d648158f5de2 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 192 7.0E-69 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 D172_014035 9fbb089a2f81131ea661d648158f5de2 203 SMART SM01207 8 183 1.3E-78 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 D172_005815 2873f74386a07814dacc79de76489f56 156 SUPERFAMILY SSF53254 1 153 1.96E-22 T 14-10-2018 IPR029033 Histidine phosphatase superfamily D172_005815 2873f74386a07814dacc79de76489f56 156 SMART SM00855 3 116 8.2E-6 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D172_005815 2873f74386a07814dacc79de76489f56 156 Gene3D G3DSA:3.40.50.1240 3 156 6.1E-33 T 14-10-2018 IPR029033 Histidine phosphatase superfamily D172_005815 2873f74386a07814dacc79de76489f56 156 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 4 148 3.4E-32 T 14-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 D172_005815 2873f74386a07814dacc79de76489f56 156 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 68 6.8E-10 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D172_006625 c5e38a2e3a40058023ce69958597eea4 237 Gene3D G3DSA:3.40.50.300 7 235 7.3E-70 T 14-10-2018 D172_006625 c5e38a2e3a40058023ce69958597eea4 237 Pfam PF00005 ABC transporter 29 176 5.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_006625 c5e38a2e3a40058023ce69958597eea4 237 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_006625 c5e38a2e3a40058023ce69958597eea4 237 SMART SM00382 38 224 2.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_006625 c5e38a2e3a40058023ce69958597eea4 237 SUPERFAMILY SSF52540 9 228 2.23E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_016725 b1da777332cff858d48c646db9b36b9e 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 6.6E-142 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 D172_016725 b1da777332cff858d48c646db9b36b9e 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 5.1E-137 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 D172_016725 b1da777332cff858d48c646db9b36b9e 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 D172_016725 b1da777332cff858d48c646db9b36b9e 354 Gene3D G3DSA:3.20.20.210 1 354 1.6E-160 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 D172_016725 b1da777332cff858d48c646db9b36b9e 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.307 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 D172_016725 b1da777332cff858d48c646db9b36b9e 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 D172_016725 b1da777332cff858d48c646db9b36b9e 354 SUPERFAMILY SSF51726 2 353 5.93E-125 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 D172_013685 9e9770348f3b8c85612526631a7e51ff 223 SMART SM00927 54 152 7.1E-56 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 D172_013685 9e9770348f3b8c85612526631a7e51ff 223 Pfam PF02976 DNA mismatch repair enzyme MutH 54 152 4.9E-30 T 14-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 D172_013685 9e9770348f3b8c85612526631a7e51ff 223 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 223 121.57 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 D172_013685 9e9770348f3b8c85612526631a7e51ff 223 SUPERFAMILY SSF52980 6 221 3.75E-70 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 D172_013685 9e9770348f3b8c85612526631a7e51ff 223 Gene3D G3DSA:3.40.600.10 2 222 4.6E-52 T 14-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 D172_013685 9e9770348f3b8c85612526631a7e51ff 223 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 6 220 1.2E-84 T 14-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 D172_014400 fb03a356e968f9d9cc8124d19398879c 431 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D172_014400 fb03a356e968f9d9cc8124d19398879c 431 SUPERFAMILY SSF53187 106 428 9.42E-94 T 14-10-2018 D172_014400 fb03a356e968f9d9cc8124d19398879c 431 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 1.5E-44 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_014400 fb03a356e968f9d9cc8124d19398879c 431 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 1.5E-44 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_014400 fb03a356e968f9d9cc8124d19398879c 431 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 1.5E-44 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_014400 fb03a356e968f9d9cc8124d19398879c 431 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 1.5E-44 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_014400 fb03a356e968f9d9cc8124d19398879c 431 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 1.5E-44 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 D172_014400 fb03a356e968f9d9cc8124d19398879c 431 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 423 6.8E-97 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 D172_014400 fb03a356e968f9d9cc8124d19398879c 431 PIRSF PIRSF036388 1 431 8.5E-188 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 D172_014400 fb03a356e968f9d9cc8124d19398879c 431 Pfam PF12404 Peptidase 7 81 2.2E-31 T 14-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 D172_014400 fb03a356e968f9d9cc8124d19398879c 431 Gene3D G3DSA:3.40.630.10 89 431 9.8E-102 T 14-10-2018 D172_015355 ffc1957efe6a1c7f629153a69936fdb8 374 Pfam PF13439 Glycosyltransferase Family 4 14 175 2.8E-9 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D172_015355 ffc1957efe6a1c7f629153a69936fdb8 374 Gene3D G3DSA:3.40.50.2000 1 196 2.5E-22 T 14-10-2018 D172_015355 ffc1957efe6a1c7f629153a69936fdb8 374 SUPERFAMILY SSF53756 3 370 9.42E-55 T 14-10-2018 D172_015355 ffc1957efe6a1c7f629153a69936fdb8 374 Pfam PF00534 Glycosyl transferases group 1 197 354 2.3E-26 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 D172_015355 ffc1957efe6a1c7f629153a69936fdb8 374 Gene3D G3DSA:3.40.50.2000 198 359 4.4E-29 T 14-10-2018 D172_012190 9bf5034b7b6d2eeb56c981168c4e6fe2 92 SUPERFAMILY SSF117991 7 92 1.31E-23 T 14-10-2018 IPR027471 YbeD-like domain superfamily D172_012190 9bf5034b7b6d2eeb56c981168c4e6fe2 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 4.7E-19 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 D172_012190 9bf5034b7b6d2eeb56c981168c4e6fe2 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 19.629 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 D172_012190 9bf5034b7b6d2eeb56c981168c4e6fe2 92 Gene3D G3DSA:3.30.70.260 6 92 1.9E-22 T 14-10-2018 D172_002085 dd84d99d46b19355ca78696a09065f29 109 Gene3D G3DSA:3.30.429.10 1 109 5.2E-31 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily D172_002085 dd84d99d46b19355ca78696a09065f29 109 SUPERFAMILY SSF55331 2 108 7.99E-26 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily D172_012630 90b16dae422cbe0b22bfdd3081891d96 172 SUPERFAMILY SSF111384 25 169 5.49E-21 T 14-10-2018 D172_012630 90b16dae422cbe0b22bfdd3081891d96 172 Gene3D G3DSA:3.30.910.20 24 170 5.6E-30 T 14-10-2018 IPR024930 Skp domain superfamily D172_012630 90b16dae422cbe0b22bfdd3081891d96 172 SMART SM00935 14 170 1.2E-30 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 D172_012630 90b16dae422cbe0b22bfdd3081891d96 172 Pfam PF03938 Outer membrane protein (OmpH-like) 13 168 4.9E-22 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 D172_001590 381ee28a1408f5c57a883ddc1af74122 125 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 68 120 1.3E-19 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D172_001590 381ee28a1408f5c57a883ddc1af74122 125 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 67 119 1.3E-15 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 D172_001590 381ee28a1408f5c57a883ddc1af74122 125 Hamap MF_00422 Protein translocase subunit SecE [secE]. 65 119 11.997 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D172_001590 381ee28a1408f5c57a883ddc1af74122 125 Gene3D G3DSA:1.20.5.1030 64 121 3.9E-16 T 14-10-2018 IPR038379 SecE superfamily D172_001590 381ee28a1408f5c57a883ddc1af74122 125 PRINTS PR01650 Bacterial translocase SecE signature 87 107 1.0E-31 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 D172_001590 381ee28a1408f5c57a883ddc1af74122 125 PRINTS PR01650 Bacterial translocase SecE signature 63 83 1.0E-31 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 D172_001590 381ee28a1408f5c57a883ddc1af74122 125 PRINTS PR01650 Bacterial translocase SecE signature 42 63 1.0E-31 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 D172_001590 381ee28a1408f5c57a883ddc1af74122 125 PRINTS PR01650 Bacterial translocase SecE signature 107 123 1.0E-31 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 D172_001270 83f308440ed523f9e0b29ff36f7cb5a6 865 Gene3D G3DSA:3.30.499.10 402 529 2.4E-146 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 D172_001270 83f308440ed523f9e0b29ff36f7cb5a6 865 Gene3D G3DSA:3.40.1060.10 385 681 2.4E-146 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 D172_001270 83f308440ed523f9e0b29ff36f7cb5a6 865 Gene3D G3DSA:3.20.19.10 162 361 2.1E-77 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 D172_001270 83f308440ed523f9e0b29ff36f7cb5a6 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.4E-63 T 14-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D172_001270 83f308440ed523f9e0b29ff36f7cb5a6 865 PIRSF PIRSF036687 1 859 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D172_001270 83f308440ed523f9e0b29ff36f7cb5a6 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 2.4E-96 T 14-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D172_001270 83f308440ed523f9e0b29ff36f7cb5a6 865 Gene3D G3DSA:3.30.499.10 683 865 8.9E-73 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 D172_001270 83f308440ed523f9e0b29ff36f7cb5a6 865 Gene3D G3DSA:1.25.40.310 1 161 1.9E-69 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D172_001270 83f308440ed523f9e0b29ff36f7cb5a6 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.4E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_001270 83f308440ed523f9e0b29ff36f7cb5a6 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 D172_001270 83f308440ed523f9e0b29ff36f7cb5a6 865 SUPERFAMILY SSF74778 2 160 1.01E-65 T 14-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D172_001270 83f308440ed523f9e0b29ff36f7cb5a6 865 SUPERFAMILY SSF52016 162 372 3.92E-70 T 14-10-2018 D172_001270 83f308440ed523f9e0b29ff36f7cb5a6 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 14-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 D172_001270 83f308440ed523f9e0b29ff36f7cb5a6 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 D172_001270 83f308440ed523f9e0b29ff36f7cb5a6 865 SUPERFAMILY SSF53732 379 860 1.02E-147 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 D172_016350 f52ff76f87997e8057be61573514c39c 1434 Gene3D G3DSA:2.60.40.1130 215 330 2.3E-26 T 14-10-2018 D172_016350 f52ff76f87997e8057be61573514c39c 1434 SUPERFAMILY SSF81296 207 331 7.42E-27 T 14-10-2018 IPR014756 Immunoglobulin E-set D172_016350 f52ff76f87997e8057be61573514c39c 1434 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 344 428 2.4E-8 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 D172_016350 f52ff76f87997e8057be61573514c39c 1434 SUPERFAMILY SSF81296 342 446 1.88E-16 T 14-10-2018 IPR014756 Immunoglobulin E-set D172_016350 f52ff76f87997e8057be61573514c39c 1434 Gene3D G3DSA:2.60.40.10 335 442 1.9E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_016350 f52ff76f87997e8057be61573514c39c 1434 SUPERFAMILY SSF51445 441 979 3.3E-119 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_016350 f52ff76f87997e8057be61573514c39c 1434 Pfam PF11852 Domain of unknown function (DUF3372) 921 1086 2.7E-57 T 14-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal D172_016350 f52ff76f87997e8057be61573514c39c 1434 Gene3D G3DSA:2.60.40.10 1222 1320 9.6E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_016350 f52ff76f87997e8057be61573514c39c 1434 Gene3D G3DSA:3.20.20.80 443 1013 3.3E-202 T 14-10-2018 D172_016350 f52ff76f87997e8057be61573514c39c 1434 SUPERFAMILY SSF49452 70 202 5.56E-31 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 D172_016350 f52ff76f87997e8057be61573514c39c 1434 SUPERFAMILY SSF51011 982 1098 2.66E-33 T 14-10-2018 D172_016350 f52ff76f87997e8057be61573514c39c 1434 Pfam PF03714 Bacterial pullanase-associated domain 91 201 3.1E-9 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 D172_016350 f52ff76f87997e8057be61573514c39c 1434 Gene3D G3DSA:2.60.40.1180 1014 1100 1.2E-19 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta D172_016350 f52ff76f87997e8057be61573514c39c 1434 Gene3D G3DSA:2.60.40.1110 72 202 3.9E-25 T 14-10-2018 D172_012775 9dafedf3ba9aa524860d86ff69b1429e 163 SUPERFAMILY SSF54593 34 162 6.6E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_012775 9dafedf3ba9aa524860d86ff69b1429e 163 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 36 158 5.1E-13 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D172_012775 9dafedf3ba9aa524860d86ff69b1429e 163 Gene3D G3DSA:3.10.180.10 34 163 4.7E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_004820 30166483370cd59bf0580c5a3b12ae3e 780 Pfam PF00905 Penicillin binding protein transpeptidase domain 460 695 3.5E-24 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 D172_004820 30166483370cd59bf0580c5a3b12ae3e 780 SUPERFAMILY SSF56601 344 773 4.63E-104 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D172_004820 30166483370cd59bf0580c5a3b12ae3e 780 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 51 769 2.2E-265 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_004820 30166483370cd59bf0580c5a3b12ae3e 780 SUPERFAMILY SSF53955 191 389 6.19E-67 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily D172_004820 30166483370cd59bf0580c5a3b12ae3e 780 Pfam PF14814 Bifunctional transglycosylase second domain 97 179 5.9E-20 T 14-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_004820 30166483370cd59bf0580c5a3b12ae3e 780 Gene3D G3DSA:1.10.3810.10 183 387 2.8E-248 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_004820 30166483370cd59bf0580c5a3b12ae3e 780 Gene3D G3DSA:3.40.710.10 86 741 2.8E-248 T 14-10-2018 D172_004820 30166483370cd59bf0580c5a3b12ae3e 780 PIRSF PIRSF002799 15 780 0.0 T 14-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_004820 30166483370cd59bf0580c5a3b12ae3e 780 Pfam PF00912 Transglycosylase 186 362 2.8E-58 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_004820 30166483370cd59bf0580c5a3b12ae3e 780 Gene3D G3DSA:3.30.2060.10 94 182 2.8E-248 T 14-10-2018 D172_019610 fa33bc94922cde5f24c11982a728111c 317 PIRSF PIRSF037004 1 317 3.8E-121 T 14-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 D172_019610 fa33bc94922cde5f24c11982a728111c 317 Pfam PF08349 Protein of unknown function (DUF1722) 192 308 1.1E-42 T 14-10-2018 IPR013560 Domain of unknown function DUF1722 D172_019610 fa33bc94922cde5f24c11982a728111c 317 Pfam PF04463 Protein of unknown function (DUF523) 8 148 2.4E-34 T 14-10-2018 IPR007553 Domain of unknown function DUF523 D172_016780 6602a5072b5dad24245ae1441cab6870 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 3.1E-231 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D172_016780 6602a5072b5dad24245ae1441cab6870 394 Gene3D G3DSA:2.40.30.10 206 334 6.5E-52 T 14-10-2018 D172_016780 6602a5072b5dad24245ae1441cab6870 394 SUPERFAMILY SSF50465 298 392 8.92E-34 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal D172_016780 6602a5072b5dad24245ae1441cab6870 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.1E-59 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_016780 6602a5072b5dad24245ae1441cab6870 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.781 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D172_016780 6602a5072b5dad24245ae1441cab6870 394 Gene3D G3DSA:2.40.30.10 338 393 1.0E-28 T 14-10-2018 D172_016780 6602a5072b5dad24245ae1441cab6870 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 5.1E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D172_016780 6602a5072b5dad24245ae1441cab6870 394 SUPERFAMILY SSF52540 6 219 3.34E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_016780 6602a5072b5dad24245ae1441cab6870 394 SUPERFAMILY SSF50447 205 301 9.43E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D172_016780 6602a5072b5dad24245ae1441cab6870 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D172_016780 6602a5072b5dad24245ae1441cab6870 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.0E-32 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal D172_016780 6602a5072b5dad24245ae1441cab6870 394 Gene3D G3DSA:3.40.50.300 1 203 2.3E-71 T 14-10-2018 D172_016780 6602a5072b5dad24245ae1441cab6870 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.0E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_016780 6602a5072b5dad24245ae1441cab6870 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 9.0E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_016780 6602a5072b5dad24245ae1441cab6870 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 9.0E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_016780 6602a5072b5dad24245ae1441cab6870 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 9.0E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_016780 6602a5072b5dad24245ae1441cab6870 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 9.0E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_016780 6602a5072b5dad24245ae1441cab6870 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site D172_001645 6602a5072b5dad24245ae1441cab6870 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 3.1E-231 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D172_001645 6602a5072b5dad24245ae1441cab6870 394 Gene3D G3DSA:2.40.30.10 206 334 6.5E-52 T 14-10-2018 D172_001645 6602a5072b5dad24245ae1441cab6870 394 SUPERFAMILY SSF50465 298 392 8.92E-34 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal D172_001645 6602a5072b5dad24245ae1441cab6870 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.1E-59 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001645 6602a5072b5dad24245ae1441cab6870 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.781 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 D172_001645 6602a5072b5dad24245ae1441cab6870 394 Gene3D G3DSA:2.40.30.10 338 393 1.0E-28 T 14-10-2018 D172_001645 6602a5072b5dad24245ae1441cab6870 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 5.1E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D172_001645 6602a5072b5dad24245ae1441cab6870 394 SUPERFAMILY SSF52540 6 219 3.34E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_001645 6602a5072b5dad24245ae1441cab6870 394 SUPERFAMILY SSF50447 205 301 9.43E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D172_001645 6602a5072b5dad24245ae1441cab6870 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D172_001645 6602a5072b5dad24245ae1441cab6870 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.0E-32 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal D172_001645 6602a5072b5dad24245ae1441cab6870 394 Gene3D G3DSA:3.40.50.300 1 203 2.3E-71 T 14-10-2018 D172_001645 6602a5072b5dad24245ae1441cab6870 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.0E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001645 6602a5072b5dad24245ae1441cab6870 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 9.0E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001645 6602a5072b5dad24245ae1441cab6870 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 9.0E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001645 6602a5072b5dad24245ae1441cab6870 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 9.0E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001645 6602a5072b5dad24245ae1441cab6870 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 9.0E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001645 6602a5072b5dad24245ae1441cab6870 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site D172_007250 77880c6fcffe49660823ea2859e1b010 117 SUPERFAMILY SSF50022 1 110 3.39E-33 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 D172_007250 77880c6fcffe49660823ea2859e1b010 117 Pfam PF13806 Rieske-like [2Fe-2S] domain 2 106 2.0E-35 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 D172_007250 77880c6fcffe49660823ea2859e1b010 117 Gene3D G3DSA:2.102.10.10 1 109 4.3E-32 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 D172_007250 77880c6fcffe49660823ea2859e1b010 117 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 2 106 7.1E-32 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 D172_002325 0d913091a6f9e9dd29dc6eb11e7d6b12 139 SUPERFAMILY SSF54523 11 136 3.56E-22 T 14-10-2018 D172_002325 0d913091a6f9e9dd29dc6eb11e7d6b12 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 1.2E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_002325 0d913091a6f9e9dd29dc6eb11e7d6b12 139 Pfam PF00114 Pilin (bacterial filament) 41 136 9.1E-15 T 14-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 D172_002325 0d913091a6f9e9dd29dc6eb11e7d6b12 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 6.0E-11 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_002325 0d913091a6f9e9dd29dc6eb11e7d6b12 139 Gene3D G3DSA:3.30.700.10 11 137 7.4E-26 T 14-10-2018 D172_002325 0d913091a6f9e9dd29dc6eb11e7d6b12 139 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_002325 0d913091a6f9e9dd29dc6eb11e7d6b12 139 PRINTS PR00885 Bacterial general secretion pathway protein H signature 6 20 8.1E-5 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 D172_002325 0d913091a6f9e9dd29dc6eb11e7d6b12 139 PRINTS PR00885 Bacterial general secretion pathway protein H signature 21 35 8.1E-5 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 D172_018345 c71a4f70ff815ebab00f11e58c91b540 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 1.2E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_018345 c71a4f70ff815ebab00f11e58c91b540 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 1.2E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_018345 c71a4f70ff815ebab00f11e58c91b540 338 SUPERFAMILY SSF47413 2 60 4.63E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D172_018345 c71a4f70ff815ebab00f11e58c91b540 338 SMART SM00354 2 72 4.1E-24 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_018345 c71a4f70ff815ebab00f11e58c91b540 338 SUPERFAMILY SSF53822 63 334 2.36E-64 T 14-10-2018 IPR028082 Periplasmic binding protein-like I D172_018345 c71a4f70ff815ebab00f11e58c91b540 338 Gene3D G3DSA:3.40.50.2300 163 292 2.6E-62 T 14-10-2018 D172_018345 c71a4f70ff815ebab00f11e58c91b540 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 D172_018345 c71a4f70ff815ebab00f11e58c91b540 338 Gene3D G3DSA:1.10.260.40 1 56 8.5E-21 T 14-10-2018 D172_018345 c71a4f70ff815ebab00f11e58c91b540 338 Gene3D G3DSA:3.40.50.2300 57 308 2.6E-62 T 14-10-2018 D172_018345 c71a4f70ff815ebab00f11e58c91b540 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 2.9E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_018345 c71a4f70ff815ebab00f11e58c91b540 338 Pfam PF13377 Periplasmic binding protein-like domain 172 333 6.6E-34 T 14-10-2018 D172_012890 25b430330796cde2823d5381408fd8de 291 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 283 2.9E-134 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D172_012890 25b430330796cde2823d5381408fd8de 291 Gene3D G3DSA:3.90.226.10 24 283 2.4E-85 T 14-10-2018 D172_012890 25b430330796cde2823d5381408fd8de 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 128 142 2.4E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D172_012890 25b430330796cde2823d5381408fd8de 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 250 259 2.4E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D172_012890 25b430330796cde2823d5381408fd8de 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 199 216 2.4E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D172_012890 25b430330796cde2823d5381408fd8de 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 162 180 2.4E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D172_012890 25b430330796cde2823d5381408fd8de 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 228 239 2.4E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D172_012890 25b430330796cde2823d5381408fd8de 291 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 280 37.345 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D172_012890 25b430330796cde2823d5381408fd8de 291 SUPERFAMILY SSF52096 24 282 1.93E-88 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_012890 25b430330796cde2823d5381408fd8de 291 Pfam PF01039 Carboxyl transferase domain 94 238 5.5E-16 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 D172_019190 e4d747a472f89a960ec4bf68db337c03 412 Pfam PF00860 Permease family 10 380 7.2E-94 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 D172_019190 e4d747a472f89a960ec4bf68db337c03 412 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 327 347 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 D172_019190 e4d747a472f89a960ec4bf68db337c03 412 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 9 403 1.1E-112 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 D172_003440 c76166076194587f8c8eaf7df7299b36 323 Gene3D G3DSA:3.10.580.10 195 320 4.0E-42 T 14-10-2018 D172_003440 c76166076194587f8c8eaf7df7299b36 323 SMART SM00116 274 322 0.94 T 14-10-2018 IPR000644 CBS domain D172_003440 c76166076194587f8c8eaf7df7299b36 323 SMART SM00116 209 257 0.01 T 14-10-2018 IPR000644 CBS domain D172_003440 c76166076194587f8c8eaf7df7299b36 323 Gene3D G3DSA:3.40.50.10490 4 194 1.2E-65 T 14-10-2018 D172_003440 c76166076194587f8c8eaf7df7299b36 323 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 44 313 3.0E-109 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 D172_003440 c76166076194587f8c8eaf7df7299b36 323 PIRSF PIRSF004692 1 323 2.0E-129 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 D172_003440 c76166076194587f8c8eaf7df7299b36 323 SUPERFAMILY SSF53697 12 320 7.79E-68 T 14-10-2018 D172_003440 c76166076194587f8c8eaf7df7299b36 323 Pfam PF01380 SIS domain 41 171 8.7E-34 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D172_003440 c76166076194587f8c8eaf7df7299b36 323 Pfam PF00571 CBS domain 270 320 8.8E-8 T 14-10-2018 IPR000644 CBS domain D172_003440 c76166076194587f8c8eaf7df7299b36 323 Pfam PF00571 CBS domain 201 256 1.9E-5 T 14-10-2018 IPR000644 CBS domain D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 SUPERFAMILY SSF55424 339 453 1.89E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 PIRSF PIRSF000350 1 447 6.6E-82 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 6.9E-28 T 14-10-2018 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 6.9E-28 T 14-10-2018 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 6.9E-28 T 14-10-2018 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 6.9E-28 T 14-10-2018 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 6.9E-28 T 14-10-2018 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 342 452 1.2E-33 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 453 9.4E-209 T 14-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.3E-66 T 14-10-2018 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 4.3E-66 T 14-10-2018 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 420 4.3E-66 T 14-10-2018 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 4.3E-66 T 14-10-2018 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 427 447 4.3E-66 T 14-10-2018 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 4.3E-66 T 14-10-2018 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 338 359 4.3E-66 T 14-10-2018 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 4.3E-66 T 14-10-2018 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 4.3E-66 T 14-10-2018 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 SUPERFAMILY SSF51905 1 362 1.68E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 Gene3D G3DSA:3.50.50.60 144 261 6.1E-121 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 8.2E-67 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 Gene3D G3DSA:3.50.50.60 5 315 6.1E-121 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 D172_015570 3b99108730f22a6b10b5252c0cd4f263 454 Gene3D G3DSA:3.30.390.30 341 453 8.2E-48 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D172_004155 f09798bbf3d73aff1a2f0824f6da54f1 350 SUPERFAMILY SSF51430 1 349 1.7E-97 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily D172_004155 f09798bbf3d73aff1a2f0824f6da54f1 350 Gene3D G3DSA:3.20.20.100 1 349 2.1E-113 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily D172_004155 f09798bbf3d73aff1a2f0824f6da54f1 350 Pfam PF00248 Aldo/keto reductase family 16 340 9.1E-70 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain D172_016040 2e830b7d87d133ab42d67e8297504d3f 172 Gene3D G3DSA:2.30.270.10 82 149 6.2E-9 T 14-10-2018 IPR023361 DUF1285, beta-roll domain superfamily D172_016040 2e830b7d87d133ab42d67e8297504d3f 172 Pfam PF06938 Protein of unknown function (DUF1285) 31 169 2.5E-40 T 14-10-2018 IPR010707 Protein of unknown function DUF1285 D172_016040 2e830b7d87d133ab42d67e8297504d3f 172 Gene3D G3DSA:3.10.540.10 2 81 2.2E-29 T 14-10-2018 D172_009580 39247df51411a79d62d1020623889b7c 181 SUPERFAMILY SSF55200 92 181 3.66E-34 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 D172_009580 39247df51411a79d62d1020623889b7c 181 Gene3D G3DSA:3.10.20.80 10 84 1.1E-30 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 D172_009580 39247df51411a79d62d1020623889b7c 181 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 16 179 1.4E-70 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 D172_009580 39247df51411a79d62d1020623889b7c 181 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 10 180 29.219 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 D172_009580 39247df51411a79d62d1020623889b7c 181 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 16 85 2.4E-29 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 D172_009580 39247df51411a79d62d1020623889b7c 181 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 92 177 5.4E-37 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 D172_009580 39247df51411a79d62d1020623889b7c 181 Gene3D G3DSA:3.30.110.10 85 181 5.9E-39 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 D172_009580 39247df51411a79d62d1020623889b7c 181 SUPERFAMILY SSF54364 14 87 9.42E-28 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 D172_009580 39247df51411a79d62d1020623889b7c 181 ProSitePatterns PS00938 Initiation factor 3 signature. 67 80 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 D172_011960 2060c805fbfd33b242c3cd01695b32b1 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 34.396 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 D172_011960 2060c805fbfd33b242c3cd01695b32b1 194 Gene3D G3DSA:3.40.50.1470 1 194 1.5E-70 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 D172_011960 2060c805fbfd33b242c3cd01695b32b1 194 Pfam PF01195 Peptidyl-tRNA hydrolase 6 189 1.9E-53 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 D172_011960 2060c805fbfd33b242c3cd01695b32b1 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 D172_011960 2060c805fbfd33b242c3cd01695b32b1 194 SUPERFAMILY SSF53178 5 193 2.09E-67 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 D172_011960 2060c805fbfd33b242c3cd01695b32b1 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 190 6.8E-66 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 D172_011960 2060c805fbfd33b242c3cd01695b32b1 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 D172_018465 efb344721955f08e648055ec99ba12a5 527 Pfam PF13181 Tetratricopeptide repeat 145 175 0.013 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_018465 efb344721955f08e648055ec99ba12a5 527 SUPERFAMILY SSF52540 279 508 1.94E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_018465 efb344721955f08e648055ec99ba12a5 527 Pfam PF13469 Sulfotransferase family 282 473 4.6E-45 T 14-10-2018 D172_018465 efb344721955f08e648055ec99ba12a5 527 Pfam PF13432 Tetratricopeptide repeat 16 68 0.001 T 14-10-2018 D172_018465 efb344721955f08e648055ec99ba12a5 527 SUPERFAMILY SSF48452 6 178 3.72E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_018465 efb344721955f08e648055ec99ba12a5 527 Gene3D G3DSA:1.25.40.10 2 104 2.8E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_018465 efb344721955f08e648055ec99ba12a5 527 SMART SM00028 39 72 1.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_018465 efb344721955f08e648055ec99ba12a5 527 SMART SM00028 144 177 4.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_018465 efb344721955f08e648055ec99ba12a5 527 SMART SM00028 106 139 220.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_018465 efb344721955f08e648055ec99ba12a5 527 Gene3D G3DSA:1.25.40.10 105 269 6.8E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_018465 efb344721955f08e648055ec99ba12a5 527 Gene3D G3DSA:3.40.50.300 270 524 8.9E-59 T 14-10-2018 D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 457 4.7E-215 T 14-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 SMART SM00448 2 113 1.3E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 Gene3D G3DSA:1.10.10.60 381 461 1.4E-18 T 14-10-2018 D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 Pfam PF00072 Response regulator receiver domain 4 113 1.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 SMART SM00382 157 304 6.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 SUPERFAMILY SSF52540 136 380 1.25E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 441 461 2.0E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 424 441 2.0E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 SUPERFAMILY SSF52172 1 182 3.42E-41 T 14-10-2018 IPR011006 CheY-like superfamily D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 Gene3D G3DSA:3.40.50.300 122 308 2.3E-68 T 14-10-2018 D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 Gene3D G3DSA:3.40.50.2300 1 121 8.1E-37 T 14-10-2018 D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 Gene3D G3DSA:1.10.8.60 309 380 3.4E-18 T 14-10-2018 D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 Pfam PF02954 Bacterial regulatory protein, Fis family 419 457 3.7E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 Pfam PF00158 Sigma-54 interaction domain 137 303 3.3E-71 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D172_001145 c916bb014f514a98bc8ecbcad80e47fc 461 SUPERFAMILY SSF46689 377 460 3.58E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_000485 377d867671d71099d5a77c45f8a962f3 629 Pfam PF00999 Sodium/hydrogen exchanger family 5 380 8.8E-68 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 D172_000485 377d867671d71099d5a77c45f8a962f3 629 SUPERFAMILY SSF51735 408 534 3.94E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_000485 377d867671d71099d5a77c45f8a962f3 629 Pfam PF02254 TrkA-N domain 410 521 3.3E-23 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 D172_000485 377d867671d71099d5a77c45f8a962f3 629 Gene3D G3DSA:1.20.1530.20 1 394 2.9E-86 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily D172_000485 377d867671d71099d5a77c45f8a962f3 629 Gene3D G3DSA:3.40.50.720 405 569 9.1E-36 T 14-10-2018 D172_000485 377d867671d71099d5a77c45f8a962f3 629 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 9 291 3.2E-79 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 D172_009575 3771df43d71b59e3e47196166fe5cd65 66 PRINTS PR00064 Ribosomal protein L35 signature 22 36 4.1E-20 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 D172_009575 3771df43d71b59e3e47196166fe5cd65 66 PRINTS PR00064 Ribosomal protein L35 signature 37 55 4.1E-20 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 D172_009575 3771df43d71b59e3e47196166fe5cd65 66 PRINTS PR00064 Ribosomal protein L35 signature 4 21 4.1E-20 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 D172_009575 3771df43d71b59e3e47196166fe5cd65 66 Gene3D G3DSA:2.40.50.530 5 65 9.5E-18 T 14-10-2018 D172_009575 3771df43d71b59e3e47196166fe5cd65 66 SUPERFAMILY SSF143034 3 65 2.09E-21 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_009575 3771df43d71b59e3e47196166fe5cd65 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 6 32 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_009575 3771df43d71b59e3e47196166fe5cd65 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 3 64 9.0E-23 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 D172_009575 3771df43d71b59e3e47196166fe5cd65 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 2 65 15.637 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 D172_009575 3771df43d71b59e3e47196166fe5cd65 66 Pfam PF01632 Ribosomal protein L35 3 63 2.5E-21 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_008410 2c9df2e380cbd5b4db4897bb4ef44ddb 545 SUPERFAMILY SSF55957 434 544 1.39E-19 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_008410 2c9df2e380cbd5b4db4897bb4ef44ddb 545 SUPERFAMILY SSF53738 29 237 7.65E-48 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_008410 2c9df2e380cbd5b4db4897bb4ef44ddb 545 Gene3D G3DSA:3.30.310.50 444 545 2.3E-34 T 14-10-2018 D172_008410 2c9df2e380cbd5b4db4897bb4ef44ddb 545 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 3.5E-264 T 14-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 D172_008410 2c9df2e380cbd5b4db4897bb4ef44ddb 545 Gene3D G3DSA:3.40.120.10 13 220 8.1E-67 T 14-10-2018 D172_008410 2c9df2e380cbd5b4db4897bb4ef44ddb 545 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 492 537 2.7E-8 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_008410 2c9df2e380cbd5b4db4897bb4ef44ddb 545 Gene3D G3DSA:3.40.120.10 321 443 6.6E-35 T 14-10-2018 D172_008410 2c9df2e380cbd5b4db4897bb4ef44ddb 545 SUPERFAMILY SSF53738 212 319 3.18E-8 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_008410 2c9df2e380cbd5b4db4897bb4ef44ddb 545 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 142 151 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_008410 2c9df2e380cbd5b4db4897bb4ef44ddb 545 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 212 319 5.0E-16 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_008410 2c9df2e380cbd5b4db4897bb4ef44ddb 545 SUPERFAMILY SSF53738 307 448 1.49E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_008410 2c9df2e380cbd5b4db4897bb4ef44ddb 545 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 42 181 3.4E-35 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_008410 2c9df2e380cbd5b4db4897bb4ef44ddb 545 Gene3D G3DSA:3.40.120.10 223 320 9.0E-44 T 14-10-2018 D172_008410 2c9df2e380cbd5b4db4897bb4ef44ddb 545 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 322 440 1.2E-28 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_000735 9228e8f70035bcf060983ca81cac2436 235 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 206 8.2E-20 T 14-10-2018 D172_000735 9228e8f70035bcf060983ca81cac2436 235 Gene3D G3DSA:3.40.50.1000 14 227 1.6E-55 T 14-10-2018 IPR023214 HAD superfamily D172_000735 9228e8f70035bcf060983ca81cac2436 235 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 201 1.3E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_000735 9228e8f70035bcf060983ca81cac2436 235 SUPERFAMILY SSF56784 12 234 9.65E-38 T 14-10-2018 IPR036412 HAD-like superfamily D172_000735 9228e8f70035bcf060983ca81cac2436 235 Gene3D G3DSA:1.20.120.1600 25 110 1.6E-55 T 14-10-2018 D172_008000 0527b741f7ef5716277a990cf9384570 534 Gene3D G3DSA:3.30.565.10 385 534 1.3E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_008000 0527b741f7ef5716277a990cf9384570 534 SUPERFAMILY SSF47384 300 380 4.9E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_008000 0527b741f7ef5716277a990cf9384570 534 Pfam PF00512 His Kinase A (phospho-acceptor) domain 318 379 1.5E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_008000 0527b741f7ef5716277a990cf9384570 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 1.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_008000 0527b741f7ef5716277a990cf9384570 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 487 1.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_008000 0527b741f7ef5716277a990cf9384570 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 1.7E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_008000 0527b741f7ef5716277a990cf9384570 534 SMART SM00388 316 381 5.8E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_008000 0527b741f7ef5716277a990cf9384570 534 Gene3D G3DSA:1.10.287.130 267 382 3.3E-21 T 14-10-2018 D172_008000 0527b741f7ef5716277a990cf9384570 534 SUPERFAMILY SSF55874 371 532 1.11E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_008000 0527b741f7ef5716277a990cf9384570 534 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 532 2.5E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_008000 0527b741f7ef5716277a990cf9384570 534 SMART SM00387 424 534 2.1E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_007515 3cf2c4f1d2765fd1fa30291ab585598c 615 Gene3D G3DSA:2.60.40.10 31 125 3.6E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_007515 3cf2c4f1d2765fd1fa30291ab585598c 615 Gene3D G3DSA:3.20.20.80 215 501 5.6E-19 T 14-10-2018 D172_007515 3cf2c4f1d2765fd1fa30291ab585598c 615 Pfam PF16586 Domain of unknown function (DUF5060) 34 116 1.8E-20 T 14-10-2018 IPR032260 Domain of unknown function DUF5060 D172_018475 2ad110aa347236c801cf10b04435b498 364 SUPERFAMILY SSF51395 1 351 1.13E-116 T 14-10-2018 D172_018475 2ad110aa347236c801cf10b04435b498 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 338 2.7E-72 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 D172_018475 2ad110aa347236c801cf10b04435b498 364 Gene3D G3DSA:3.20.20.70 1 355 8.7E-125 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_016425 e046f3c446e3be214db1aa17bfea6efb 208 SUPERFAMILY SSF49503 47 135 3.23E-17 T 14-10-2018 IPR008972 Cupredoxin D172_016425 e046f3c446e3be214db1aa17bfea6efb 208 SUPERFAMILY SSF49464 116 174 1.8E-7 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily D172_016425 e046f3c446e3be214db1aa17bfea6efb 208 Gene3D G3DSA:2.60.40.420 35 135 1.4E-12 T 14-10-2018 IPR008972 Cupredoxin D172_007535 ab2450d61ab9fc1bbb20f6fd848c9e4e 672 Gene3D G3DSA:3.40.50.970 7 329 1.7E-134 T 14-10-2018 D172_007535 ab2450d61ab9fc1bbb20f6fd848c9e4e 672 SMART SM00861 359 530 1.2E-60 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D172_007535 ab2450d61ab9fc1bbb20f6fd848c9e4e 672 Gene3D G3DSA:3.40.50.970 330 542 3.3E-74 T 14-10-2018 D172_007535 ab2450d61ab9fc1bbb20f6fd848c9e4e 672 Gene3D G3DSA:3.40.50.920 543 669 4.8E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D172_007535 ab2450d61ab9fc1bbb20f6fd848c9e4e 672 SUPERFAMILY SSF52922 537 669 6.81E-42 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D172_007535 ab2450d61ab9fc1bbb20f6fd848c9e4e 672 ProSitePatterns PS00802 Transketolase signature 2. 472 488 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D172_007535 ab2450d61ab9fc1bbb20f6fd848c9e4e 672 Pfam PF02780 Transketolase, C-terminal domain 553 660 3.5E-14 T 14-10-2018 IPR033248 Transketolase, C-terminal domain D172_007535 ab2450d61ab9fc1bbb20f6fd848c9e4e 672 Pfam PF02779 Transketolase, pyrimidine binding domain 359 530 2.2E-41 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D172_007535 ab2450d61ab9fc1bbb20f6fd848c9e4e 672 SUPERFAMILY SSF52518 10 324 3.59E-121 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_007535 ab2450d61ab9fc1bbb20f6fd848c9e4e 672 SUPERFAMILY SSF52518 351 531 9.06E-62 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_007535 ab2450d61ab9fc1bbb20f6fd848c9e4e 672 TIGRFAM TIGR00232 tktlase_bact: transketolase 11 668 1.9E-297 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 D172_007535 ab2450d61ab9fc1bbb20f6fd848c9e4e 672 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D172_007535 ab2450d61ab9fc1bbb20f6fd848c9e4e 672 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 10 333 2.1E-162 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D172_003080 555a408a0ccd0b5512f1918d5dfead8f 149 SUPERFAMILY SSF52788 1 149 7.85E-45 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily D172_003080 555a408a0ccd0b5512f1918d5dfead8f 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 1.3E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 D172_003080 555a408a0ccd0b5512f1918d5dfead8f 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 1.3E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 D172_003080 555a408a0ccd0b5512f1918d5dfead8f 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 1.3E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 D172_003080 555a408a0ccd0b5512f1918d5dfead8f 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 1.3E-22 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 D172_003080 555a408a0ccd0b5512f1918d5dfead8f 149 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 145 1.5E-38 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I D172_003080 555a408a0ccd0b5512f1918d5dfead8f 149 Gene3D G3DSA:3.40.50.2300 1 149 1.4E-56 T 14-10-2018 D172_003080 555a408a0ccd0b5512f1918d5dfead8f 149 SMART SM00226 2 148 7.9E-40 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I D172_005770 5f593b1d9d506c7e175531889063071e 176 Pfam PF07484 Phage Tail Collar Domain 7 63 1.2E-22 T 14-10-2018 IPR011083 Phage tail collar domain D172_005770 5f593b1d9d506c7e175531889063071e 176 SUPERFAMILY SSF88874 1 170 3.4E-44 T 14-10-2018 D172_005770 5f593b1d9d506c7e175531889063071e 176 Gene3D G3DSA:4.10.1070.10 60 147 1.6E-16 T 14-10-2018 D172_005770 5f593b1d9d506c7e175531889063071e 176 Gene3D G3DSA:3.90.1340.10 6 59 1.6E-16 T 14-10-2018 IPR037053 Phage tail collar domain superfamily D172_007490 3d8a8f479880d7e7ada57a4010d493c1 741 Gene3D G3DSA:2.60.120.260 51 214 3.3E-38 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_007490 3d8a8f479880d7e7ada57a4010d493c1 741 PRINTS PR00134 Glycosyl hydrolase family 10 signature 414 425 5.5E-14 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007490 3d8a8f479880d7e7ada57a4010d493c1 741 PRINTS PR00134 Glycosyl hydrolase family 10 signature 360 371 5.5E-14 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007490 3d8a8f479880d7e7ada57a4010d493c1 741 PRINTS PR00134 Glycosyl hydrolase family 10 signature 443 455 5.5E-14 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007490 3d8a8f479880d7e7ada57a4010d493c1 741 PRINTS PR00134 Glycosyl hydrolase family 10 signature 311 323 5.5E-14 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007490 3d8a8f479880d7e7ada57a4010d493c1 741 Gene3D G3DSA:2.60.120.260 584 740 6.4E-43 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_007490 3d8a8f479880d7e7ada57a4010d493c1 741 SUPERFAMILY SSF49785 588 737 1.33E-38 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_007490 3d8a8f479880d7e7ada57a4010d493c1 741 SMART SM00633 280 576 4.0E-89 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007490 3d8a8f479880d7e7ada57a4010d493c1 741 Pfam PF00331 Glycosyl hydrolase family 10 237 575 1.0E-94 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007490 3d8a8f479880d7e7ada57a4010d493c1 741 SUPERFAMILY SSF49785 51 209 3.91E-16 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_007490 3d8a8f479880d7e7ada57a4010d493c1 741 SUPERFAMILY SSF51445 235 578 1.06E-94 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_007490 3d8a8f479880d7e7ada57a4010d493c1 741 Pfam PF02018 Carbohydrate binding domain 53 194 2.9E-7 T 14-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 D172_007490 3d8a8f479880d7e7ada57a4010d493c1 741 Pfam PF02018 Carbohydrate binding domain 590 723 4.8E-29 T 14-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 D172_007490 3d8a8f479880d7e7ada57a4010d493c1 741 Gene3D G3DSA:3.20.20.80 236 578 3.9E-106 T 14-10-2018 D172_003105 4a70d5edda7fe57aeb643f1ba2a11875 188 PIRSF PIRSF005901 2 188 1.3E-65 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP D172_003105 4a70d5edda7fe57aeb643f1ba2a11875 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.795 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 D172_003105 4a70d5edda7fe57aeb643f1ba2a11875 188 SMART SM00841 131 186 2.0E-33 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 D172_003105 4a70d5edda7fe57aeb643f1ba2a11875 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 1.8E-24 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like D172_003105 4a70d5edda7fe57aeb643f1ba2a11875 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.9E-22 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 D172_003105 4a70d5edda7fe57aeb643f1ba2a11875 188 Gene3D G3DSA:2.40.50.140 130 188 1.9E-28 T 14-10-2018 D172_003105 4a70d5edda7fe57aeb643f1ba2a11875 188 Gene3D G3DSA:2.40.50.140 66 129 8.9E-29 T 14-10-2018 D172_003105 4a70d5edda7fe57aeb643f1ba2a11875 188 SUPERFAMILY SSF50104 2 63 6.02E-20 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily D172_003105 4a70d5edda7fe57aeb643f1ba2a11875 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 3.7E-26 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 D172_003105 4a70d5edda7fe57aeb643f1ba2a11875 188 Gene3D G3DSA:2.30.30.30 1 64 2.6E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 D172_003105 4a70d5edda7fe57aeb643f1ba2a11875 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site D172_003105 4a70d5edda7fe57aeb643f1ba2a11875 188 SUPERFAMILY SSF50249 69 128 2.53E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_003105 4a70d5edda7fe57aeb643f1ba2a11875 188 SUPERFAMILY SSF50249 130 187 6.68E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_003105 4a70d5edda7fe57aeb643f1ba2a11875 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 2.2E-78 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 D172_003105 4a70d5edda7fe57aeb643f1ba2a11875 188 SMART SM01185 69 123 1.6E-25 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 D172_012275 c0b4a1ca1ae3d9a0e86218f0d4d58cc6 173 Gene3D G3DSA:2.60.120.620 3 173 1.1E-34 T 14-10-2018 D172_012275 c0b4a1ca1ae3d9a0e86218f0d4d58cc6 173 Pfam PF13759 Putative 2OG-Fe(II) oxygenase 74 169 1.1E-21 T 14-10-2018 IPR012668 Conserved hypothetical protein CHP02466 D172_012275 c0b4a1ca1ae3d9a0e86218f0d4d58cc6 173 TIGRFAM TIGR02466 TIGR02466: conserved hypothetical protein 26 171 1.0E-24 T 14-10-2018 IPR012668 Conserved hypothetical protein CHP02466 D172_013145 873e82ec1a7b94d12948ce8829b7968f 490 Gene3D G3DSA:3.40.50.720 1 208 1.7E-79 T 14-10-2018 D172_013145 873e82ec1a7b94d12948ce8829b7968f 490 SUPERFAMILY SSF48179 348 486 1.87E-42 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_013145 873e82ec1a7b94d12948ce8829b7968f 490 Gene3D G3DSA:1.10.1040.10 209 490 5.0E-117 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 D172_013145 873e82ec1a7b94d12948ce8829b7968f 490 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 3.2E-117 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 D172_013145 873e82ec1a7b94d12948ce8829b7968f 490 SUPERFAMILY SSF51735 28 209 1.03E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_013145 873e82ec1a7b94d12948ce8829b7968f 490 SUPERFAMILY SSF48179 210 343 7.31E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_013145 873e82ec1a7b94d12948ce8829b7968f 490 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 487 35.958 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 D172_013145 873e82ec1a7b94d12948ce8829b7968f 490 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 2.3E-56 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 D172_013145 873e82ec1a7b94d12948ce8829b7968f 490 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 4.1E-26 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 D172_013145 873e82ec1a7b94d12948ce8829b7968f 490 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 354 484 6.6E-20 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 D172_018790 5f1c9785239c7b9a6d28dbea7fc43ff7 92 Gene3D G3DSA:3.10.50.40 2 92 1.5E-32 T 14-10-2018 D172_018790 5f1c9785239c7b9a6d28dbea7fc43ff7 92 SUPERFAMILY SSF54534 5 90 4.45E-25 T 14-10-2018 D172_018790 5f1c9785239c7b9a6d28dbea7fc43ff7 92 Pfam PF13616 PPIC-type PPIASE domain 13 89 1.9E-21 T 14-10-2018 D172_008500 c390f76c103e8fb65a7330218f60dc56 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 14-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 D172_008500 c390f76c103e8fb65a7330218f60dc56 249 Pfam PF01012 Electron transfer flavoprotein domain 30 206 4.7E-45 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 D172_008500 c390f76c103e8fb65a7330218f60dc56 249 Gene3D G3DSA:3.40.50.620 1 247 7.4E-86 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_008500 c390f76c103e8fb65a7330218f60dc56 249 PIRSF PIRSF000090 1 249 1.3E-82 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 D172_008500 c390f76c103e8fb65a7330218f60dc56 249 SUPERFAMILY SSF52402 1 242 2.87E-84 T 14-10-2018 D172_008500 c390f76c103e8fb65a7330218f60dc56 249 SMART SM00893 23 211 1.0E-66 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 D172_012205 28eddd967c9328831f9b1fe7f0437460 428 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 64 143 1.6E-22 T 14-10-2018 IPR010221 VCBS repeat D172_012205 28eddd967c9328831f9b1fe7f0437460 428 Gene3D G3DSA:2.60.120.200 192 423 2.2E-9 T 14-10-2018 D172_011275 083ab838f38e9a7814fed84d581f1996 1297 Pfam PF11898 Domain of unknown function (DUF3418) 711 1294 2.9E-208 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal D172_011275 083ab838f38e9a7814fed84d581f1996 1297 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 622 697 4.6E-18 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 D172_011275 083ab838f38e9a7814fed84d581f1996 1297 SUPERFAMILY SSF52540 71 681 3.07E-108 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_011275 083ab838f38e9a7814fed84d581f1996 1297 Pfam PF00270 DEAD/DEAH box helicase 85 230 5.2E-7 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D172_011275 083ab838f38e9a7814fed84d581f1996 1297 SMART SM00487 65 256 1.2E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_011275 083ab838f38e9a7814fed84d581f1996 1297 SMART SM00847 464 559 2.1E-32 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 D172_011275 083ab838f38e9a7814fed84d581f1996 1297 SMART SM00490 304 404 5.6E-16 T 14-10-2018 IPR001650 Helicase, C-terminal D172_011275 083ab838f38e9a7814fed84d581f1996 1297 Pfam PF04408 Helicase associated domain (HA2) 467 555 2.2E-15 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 D172_011275 083ab838f38e9a7814fed84d581f1996 1297 Gene3D G3DSA:1.20.120.1080 448 549 1.6E-16 T 14-10-2018 D172_011275 083ab838f38e9a7814fed84d581f1996 1297 Gene3D G3DSA:3.40.50.300 22 249 3.0E-76 T 14-10-2018 D172_011275 083ab838f38e9a7814fed84d581f1996 1297 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 12 1294 0.0 T 14-10-2018 IPR010222 RNA helicase HrpA GO:0004004 D172_011275 083ab838f38e9a7814fed84d581f1996 1297 Gene3D G3DSA:3.40.50.300 250 421 4.7E-55 T 14-10-2018 D172_011275 083ab838f38e9a7814fed84d581f1996 1297 SMART SM00382 89 384 3.5E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_011275 083ab838f38e9a7814fed84d581f1996 1297 Pfam PF00271 Helicase conserved C-terminal domain 287 403 8.7E-12 T 14-10-2018 IPR001650 Helicase, C-terminal D172_014635 9b2a2a6b8ffca65bc221e7a73e513374 334 SMART SM00342 248 328 1.8E-11 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_014635 9b2a2a6b8ffca65bc221e7a73e513374 334 Gene3D G3DSA:1.10.10.60 224 332 3.0E-15 T 14-10-2018 D172_014635 9b2a2a6b8ffca65bc221e7a73e513374 334 Pfam PF12833 Helix-turn-helix domain 255 329 7.3E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_014635 9b2a2a6b8ffca65bc221e7a73e513374 334 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 44 203 2.2E-29 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal D172_014635 9b2a2a6b8ffca65bc221e7a73e513374 334 SUPERFAMILY SSF46689 290 328 1.25E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_001085 141f832de0ee35853276986977dad32a 85 SUPERFAMILY SSF50249 5 82 4.07E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_001085 141f832de0ee35853276986977dad32a 85 Pfam PF00366 Ribosomal protein S17 10 76 2.9E-30 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001085 141f832de0ee35853276986977dad32a 85 Gene3D G3DSA:2.40.50.140 1 82 2.6E-35 T 14-10-2018 D172_001085 141f832de0ee35853276986977dad32a 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 9.4E-35 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001085 141f832de0ee35853276986977dad32a 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 22.777 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001085 141f832de0ee35853276986977dad32a 85 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 3.9E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001085 141f832de0ee35853276986977dad32a 85 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 3.9E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001085 141f832de0ee35853276986977dad32a 85 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 3.9E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001085 141f832de0ee35853276986977dad32a 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 1.0E-33 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_012955 80cc4ce258a699a58cb6b0c05edf440e 185 Pfam PF04542 Sigma-70 region 2 26 91 7.0E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D172_012955 80cc4ce258a699a58cb6b0c05edf440e 185 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_012955 80cc4ce258a699a58cb6b0c05edf440e 185 SUPERFAMILY SSF88946 18 105 2.86E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D172_012955 80cc4ce258a699a58cb6b0c05edf440e 185 SUPERFAMILY SSF88659 111 173 9.16E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_012955 80cc4ce258a699a58cb6b0c05edf440e 185 Gene3D G3DSA:1.10.1740.10 13 93 9.6E-19 T 14-10-2018 D172_012955 80cc4ce258a699a58cb6b0c05edf440e 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 173 5.1E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D172_012955 80cc4ce258a699a58cb6b0c05edf440e 185 Gene3D G3DSA:1.10.10.10 110 175 1.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_012955 80cc4ce258a699a58cb6b0c05edf440e 185 Pfam PF08281 Sigma-70, region 4 119 169 1.9E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_011775 a93fc3ba5faaadc4bb79dacb759e4550 545 SUPERFAMILY SSF48452 140 380 3.8E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_011775 a93fc3ba5faaadc4bb79dacb759e4550 545 SMART SM00448 9 125 1.3E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_011775 a93fc3ba5faaadc4bb79dacb759e4550 545 Pfam PF00072 Response regulator receiver domain 11 125 5.4E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_011775 a93fc3ba5faaadc4bb79dacb759e4550 545 SUPERFAMILY SSF52172 7 141 9.96E-23 T 14-10-2018 IPR011006 CheY-like superfamily D172_011775 a93fc3ba5faaadc4bb79dacb759e4550 545 SUPERFAMILY SSF48452 345 495 1.31E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_011775 a93fc3ba5faaadc4bb79dacb759e4550 545 Gene3D G3DSA:3.40.50.2300 4 136 1.1E-21 T 14-10-2018 D172_011775 a93fc3ba5faaadc4bb79dacb759e4550 545 Gene3D G3DSA:1.25.40.10 137 296 7.1E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_011775 a93fc3ba5faaadc4bb79dacb759e4550 545 Gene3D G3DSA:1.25.40.10 330 519 1.2E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_011775 a93fc3ba5faaadc4bb79dacb759e4550 545 Pfam PF13181 Tetratricopeptide repeat 173 198 0.16 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_011775 a93fc3ba5faaadc4bb79dacb759e4550 545 Pfam PF13181 Tetratricopeptide repeat 238 266 0.16 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_011775 a93fc3ba5faaadc4bb79dacb759e4550 545 SMART SM00028 234 267 30.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_011775 a93fc3ba5faaadc4bb79dacb759e4550 545 SMART SM00028 167 200 31.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_011775 a93fc3ba5faaadc4bb79dacb759e4550 545 SMART SM00028 449 482 8.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_005505 50e3d020852a5c54068dc20765c8c3b8 1088 Pfam PF05567 Neisseria PilC beta-propeller domain 535 853 1.9E-21 T 14-10-2018 IPR008707 PilC beta-propeller domain D172_005505 50e3d020852a5c54068dc20765c8c3b8 1088 SUPERFAMILY SSF53300 42 238 5.84E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily D172_014470 8fcc7a2783a339bb03e07d9318cd84a8 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 316 8.1E-57 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014470 8fcc7a2783a339bb03e07d9318cd84a8 338 PIRSF PIRSF000149 1 338 1.0E-134 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014470 8fcc7a2783a339bb03e07d9318cd84a8 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 3.2E-32 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014470 8fcc7a2783a339bb03e07d9318cd84a8 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 3.2E-32 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014470 8fcc7a2783a339bb03e07d9318cd84a8 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 3.2E-32 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014470 8fcc7a2783a339bb03e07d9318cd84a8 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 3.2E-32 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014470 8fcc7a2783a339bb03e07d9318cd84a8 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 3.2E-32 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014470 8fcc7a2783a339bb03e07d9318cd84a8 338 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 5 328 6.9E-169 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 D172_014470 8fcc7a2783a339bb03e07d9318cd84a8 338 SUPERFAMILY SSF55347 155 317 4.46E-61 T 14-10-2018 D172_014470 8fcc7a2783a339bb03e07d9318cd84a8 338 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 328 6.5E-113 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014470 8fcc7a2783a339bb03e07d9318cd84a8 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 105 5.6E-34 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014470 8fcc7a2783a339bb03e07d9318cd84a8 338 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 67.039 T 14-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 D172_014470 8fcc7a2783a339bb03e07d9318cd84a8 338 SMART SM00846 3 155 1.3E-82 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014470 8fcc7a2783a339bb03e07d9318cd84a8 338 Gene3D G3DSA:3.30.360.10 154 318 6.6E-134 T 14-10-2018 D172_014470 8fcc7a2783a339bb03e07d9318cd84a8 338 Gene3D G3DSA:3.40.50.720 4 328 6.6E-134 T 14-10-2018 D172_014470 8fcc7a2783a339bb03e07d9318cd84a8 338 SUPERFAMILY SSF51735 1 177 1.6E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_003785 a731e2200dbb5b54570226cc3fd9c43b 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 D172_003785 a731e2200dbb5b54570226cc3fd9c43b 129 Pfam PF01597 Glycine cleavage H-protein 8 128 3.1E-48 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate D172_003785 a731e2200dbb5b54570226cc3fd9c43b 129 Gene3D G3DSA:2.40.50.100 2 129 1.0E-52 T 14-10-2018 D172_003785 a731e2200dbb5b54570226cc3fd9c43b 129 SUPERFAMILY SSF51230 3 128 2.75E-46 T 14-10-2018 IPR011053 Single hybrid motif D172_003785 a731e2200dbb5b54570226cc3fd9c43b 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 1.8E-55 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 D172_003785 a731e2200dbb5b54570226cc3fd9c43b 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 42.054 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 D172_013345 9030cd230c813330e5341ce89545712d 236 Gene3D G3DSA:1.20.140.160 83 233 2.8E-42 T 14-10-2018 D172_013345 9030cd230c813330e5341ce89545712d 236 Gene3D G3DSA:1.10.1740.10 2 81 9.3E-28 T 14-10-2018 D172_013345 9030cd230c813330e5341ce89545712d 236 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 230 1.6E-29 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D172_013345 9030cd230c813330e5341ce89545712d 236 Pfam PF04539 Sigma-70 region 3 94 147 7.4E-9 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 D172_013345 9030cd230c813330e5341ce89545712d 236 SUPERFAMILY SSF88659 86 150 2.62E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_013345 9030cd230c813330e5341ce89545712d 236 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 201 227 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_013345 9030cd230c813330e5341ce89545712d 236 Pfam PF04542 Sigma-70 region 2 13 84 4.8E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D172_013345 9030cd230c813330e5341ce89545712d 236 Pfam PF04545 Sigma-70, region 4 180 228 3.7E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 D172_013345 9030cd230c813330e5341ce89545712d 236 SUPERFAMILY SSF88946 4 84 4.08E-23 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D172_013345 9030cd230c813330e5341ce89545712d 236 PIRSF PIRSF000770 3 236 1.3E-35 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_013345 9030cd230c813330e5341ce89545712d 236 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 1 234 58.088 T 14-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 D172_013345 9030cd230c813330e5341ce89545712d 236 PRINTS PR00046 Major sigma-70 factor signature 39 52 2.0E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_013345 9030cd230c813330e5341ce89545712d 236 PRINTS PR00046 Major sigma-70 factor signature 184 196 2.0E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_013345 9030cd230c813330e5341ce89545712d 236 PRINTS PR00046 Major sigma-70 factor signature 201 216 2.0E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_013345 9030cd230c813330e5341ce89545712d 236 PRINTS PR00046 Major sigma-70 factor signature 216 227 2.0E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_013345 9030cd230c813330e5341ce89545712d 236 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 12 231 9.7E-79 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 D172_013345 9030cd230c813330e5341ce89545712d 236 SUPERFAMILY SSF88659 162 234 9.53E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_011325 0963e04ba4092c73f9ba2c38c82385c8 485 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 2 485 39.173 T 14-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 D172_011325 0963e04ba4092c73f9ba2c38c82385c8 485 Gene3D G3DSA:3.30.2010.10 73 152 3.6E-6 T 14-10-2018 D172_011325 0963e04ba4092c73f9ba2c38c82385c8 485 Pfam PF14559 Tetratricopeptide repeat 285 341 3.4E-7 T 14-10-2018 D172_011325 0963e04ba4092c73f9ba2c38c82385c8 485 Pfam PF14559 Tetratricopeptide repeat 352 417 2.3E-8 T 14-10-2018 D172_011325 0963e04ba4092c73f9ba2c38c82385c8 485 Gene3D G3DSA:1.25.40.10 350 424 3.5E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_011325 0963e04ba4092c73f9ba2c38c82385c8 485 Gene3D G3DSA:1.25.40.10 244 349 1.4E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_011325 0963e04ba4092c73f9ba2c38c82385c8 485 SUPERFAMILY SSF48452 297 456 1.99E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_011325 0963e04ba4092c73f9ba2c38c82385c8 485 Pfam PF01435 Peptidase family M48 73 257 1.4E-29 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 D172_014385 c327f6f21fb04e468f7d43e2b4b02110 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 575 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_014385 c327f6f21fb04e468f7d43e2b4b02110 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 555 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_014385 c327f6f21fb04e468f7d43e2b4b02110 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 520 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_014385 c327f6f21fb04e468f7d43e2b4b02110 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 534 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_014385 c327f6f21fb04e468f7d43e2b4b02110 588 SMART SM00387 466 578 5.3E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_014385 c327f6f21fb04e468f7d43e2b4b02110 588 Gene3D G3DSA:3.30.565.10 426 580 1.8E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_014385 c327f6f21fb04e468f7d43e2b4b02110 588 SUPERFAMILY SSF55874 426 576 2.1E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_014385 c327f6f21fb04e468f7d43e2b4b02110 588 Gene3D G3DSA:1.10.287.130 314 418 2.8E-16 T 14-10-2018 D172_014385 c327f6f21fb04e468f7d43e2b4b02110 588 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 471 576 1.1E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_006610 758fda269e2480355ed62cab5661e2ba 354 Gene3D G3DSA:1.10.340.50 191 297 3.3E-13 T 14-10-2018 D172_006610 758fda269e2480355ed62cab5661e2ba 354 Pfam PF03090 Replicase family 42 176 1.7E-35 T 14-10-2018 IPR004322 Plasmid replicase, bacterial D172_006610 758fda269e2480355ed62cab5661e2ba 354 Pfam PF08708 Primase C terminal 1 (PriCT-1) 192 267 4.2E-8 T 14-10-2018 IPR014820 Primase, C-terminal 1 D172_011805 f54ab133f4f732887078bbb7e2b30384 1133 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1117 1.1E-61 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal D172_011805 f54ab133f4f732887078bbb7e2b30384 1133 Gene3D G3DSA:3.40.50.300 1 250 7.2E-53 T 14-10-2018 D172_011805 f54ab133f4f732887078bbb7e2b30384 1133 Gene3D G3DSA:3.40.50.300 908 1132 1.7E-43 T 14-10-2018 D172_011805 f54ab133f4f732887078bbb7e2b30384 1133 SUPERFAMILY SSF52540 1 376 1.03E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_011805 f54ab133f4f732887078bbb7e2b30384 1133 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1126 20.589 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 D172_011805 f54ab133f4f732887078bbb7e2b30384 1133 PIRSF PIRSF005719 594 1132 5.4E-111 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein D172_011805 f54ab133f4f732887078bbb7e2b30384 1133 PIRSF PIRSF005719 1 533 5.8E-118 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein D172_011805 f54ab133f4f732887078bbb7e2b30384 1133 SUPERFAMILY SSF52540 1 1127 2.43E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_007170 93b0fa2ac70117b8f935c2c742a907e4 397 Pfam PF13372 Alginate export 28 253 2.5E-11 T 14-10-2018 IPR025388 Alginate export domain D172_002795 38fac2d71399f4119074c3bae344795a 364 Gene3D G3DSA:2.120.10.30 21 131 2.8E-5 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_002795 38fac2d71399f4119074c3bae344795a 364 Gene3D G3DSA:2.120.10.30 134 361 9.7E-17 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_002795 38fac2d71399f4119074c3bae344795a 364 SUPERFAMILY SSF50952 21 363 7.59E-30 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 D172_002795 38fac2d71399f4119074c3bae344795a 364 Pfam PF07995 Glucose / Sorbosone dehydrogenase 178 290 9.5E-13 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase D172_019665 ef861166957a0ffb8922c1a869892b1b 165 Gene3D G3DSA:3.30.70.1150 80 158 1.1E-22 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal D172_019665 ef861166957a0ffb8922c1a869892b1b 165 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 2.0E-36 T 14-10-2018 D172_019665 ef861166957a0ffb8922c1a869892b1b 165 Pfam PF13710 ACT domain 12 73 7.0E-17 T 14-10-2018 D172_019665 ef861166957a0ffb8922c1a869892b1b 165 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 1.1E-56 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 D172_019665 ef861166957a0ffb8922c1a869892b1b 165 SUPERFAMILY SSF55021 79 163 1.96E-21 T 14-10-2018 D172_019665 ef861166957a0ffb8922c1a869892b1b 165 Gene3D G3DSA:3.30.70.260 1 78 1.0E-33 T 14-10-2018 D172_019665 ef861166957a0ffb8922c1a869892b1b 165 Pfam PF10369 Small subunit of acetolactate synthase 84 159 4.8E-21 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 D172_019665 ef861166957a0ffb8922c1a869892b1b 165 SUPERFAMILY SSF55021 2 76 1.46E-21 T 14-10-2018 D172_014375 8b3d913a3340191ebff373427fe4313e 805 Gene3D G3DSA:3.40.1160.10 3 286 3.3E-82 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D172_014375 8b3d913a3340191ebff373427fe4313e 805 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_014375 8b3d913a3340191ebff373427fe4313e 805 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 462 596 3.5E-26 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 D172_014375 8b3d913a3340191ebff373427fe4313e 805 SUPERFAMILY SSF55347 604 787 9.15E-47 T 14-10-2018 D172_014375 8b3d913a3340191ebff373427fe4313e 805 Pfam PF13840 ACT domain 303 365 2.0E-8 T 14-10-2018 IPR027795 CASTOR, ACT domain D172_014375 8b3d913a3340191ebff373427fe4313e 805 Pfam PF00742 Homoserine dehydrogenase 604 800 1.5E-43 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 D172_014375 8b3d913a3340191ebff373427fe4313e 805 SUPERFAMILY SSF51735 456 626 5.15E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_014375 8b3d913a3340191ebff373427fe4313e 805 Pfam PF00696 Amino acid kinase family 2 275 5.3E-43 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D172_014375 8b3d913a3340191ebff373427fe4313e 805 Gene3D G3DSA:1.20.120.1320 40 133 3.3E-82 T 14-10-2018 D172_014375 8b3d913a3340191ebff373427fe4313e 805 Gene3D G3DSA:3.30.2130.10 291 453 4.2E-44 T 14-10-2018 D172_014375 8b3d913a3340191ebff373427fe4313e 805 Gene3D G3DSA:3.40.50.720 456 801 2.8E-115 T 14-10-2018 D172_014375 8b3d913a3340191ebff373427fe4313e 805 PIRSF PIRSF000727 1 805 9.6E-305 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_014375 8b3d913a3340191ebff373427fe4313e 805 SUPERFAMILY SSF53633 1 290 3.49E-70 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D172_014375 8b3d913a3340191ebff373427fe4313e 805 SUPERFAMILY SSF55021 376 453 2.85E-19 T 14-10-2018 D172_014375 8b3d913a3340191ebff373427fe4313e 805 SUPERFAMILY SSF55021 295 371 1.31E-20 T 14-10-2018 D172_014375 8b3d913a3340191ebff373427fe4313e 805 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 650 672 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 D172_014375 8b3d913a3340191ebff373427fe4313e 805 Gene3D G3DSA:3.30.360.10 615 785 2.8E-115 T 14-10-2018 D172_014375 8b3d913a3340191ebff373427fe4313e 805 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 450 1.1E-120 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_005375 10833886ecd939a71da084998db6ac47 237 Gene3D G3DSA:3.40.50.300 4 236 4.3E-19 T 14-10-2018 D172_005375 10833886ecd939a71da084998db6ac47 237 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 234 4.8E-67 T 14-10-2018 IPR017746 Cellulose synthase operon protein BcsQ D172_005375 10833886ecd939a71da084998db6ac47 237 SUPERFAMILY SSF52540 3 233 3.99E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_005375 10833886ecd939a71da084998db6ac47 237 Pfam PF06564 Cellulose biosynthesis protein BcsQ 3 231 6.0E-40 T 14-10-2018 IPR017746 Cellulose synthase operon protein BcsQ D172_009115 e10e6a34e30e57165c6f5a3e5c889e44 423 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 14 419 8.9E-160 T 14-10-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 D172_009115 e10e6a34e30e57165c6f5a3e5c889e44 423 Gene3D G3DSA:3.90.1580.10 172 423 2.2E-26 T 14-10-2018 D172_009115 e10e6a34e30e57165c6f5a3e5c889e44 423 SUPERFAMILY SSF56436 183 421 1.37E-59 T 14-10-2018 IPR016187 C-type lectin fold D172_009115 e10e6a34e30e57165c6f5a3e5c889e44 423 Pfam PF03781 Sulfatase-modifying factor enzyme 1 197 341 1.0E-19 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 D172_009115 e10e6a34e30e57165c6f5a3e5c889e44 423 Pfam PF12867 DinB superfamily 20 150 3.2E-12 T 14-10-2018 IPR024775 DinB-like domain D172_017095 134c9a3a8bbfeeb34465dd52484d8e7c 165 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 14-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 D172_017095 134c9a3a8bbfeeb34465dd52484d8e7c 165 PRINTS PR01011 Glutathione peroxidase family signature 122 131 3.7E-21 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D172_017095 134c9a3a8bbfeeb34465dd52484d8e7c 165 PRINTS PR01011 Glutathione peroxidase family signature 57 73 3.7E-21 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D172_017095 134c9a3a8bbfeeb34465dd52484d8e7c 165 PRINTS PR01011 Glutathione peroxidase family signature 22 39 3.7E-21 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D172_017095 134c9a3a8bbfeeb34465dd52484d8e7c 165 PIRSF PIRSF000303 1 162 1.9E-61 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D172_017095 134c9a3a8bbfeeb34465dd52484d8e7c 165 SUPERFAMILY SSF52833 4 158 4.78E-56 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_017095 134c9a3a8bbfeeb34465dd52484d8e7c 165 Pfam PF00255 Glutathione peroxidase 4 111 2.4E-40 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D172_017095 134c9a3a8bbfeeb34465dd52484d8e7c 165 Gene3D G3DSA:3.40.30.10 1 165 7.6E-65 T 14-10-2018 D172_017095 134c9a3a8bbfeeb34465dd52484d8e7c 165 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 D172_010830 21d0bb449a9b4dc5353407bf17410c9e 368 Pfam PF03022 Major royal jelly protein 97 342 1.3E-16 T 14-10-2018 IPR017996 Major royal jelly protein/protein yellow D172_010830 21d0bb449a9b4dc5353407bf17410c9e 368 SUPERFAMILY SSF63829 95 342 8.5E-17 T 14-10-2018 D172_010830 21d0bb449a9b4dc5353407bf17410c9e 368 Gene3D G3DSA:2.120.10.30 27 368 5.2E-98 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_007565 18aaf84cc7945a48cc56798b323f1faf 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 3.8E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_007565 18aaf84cc7945a48cc56798b323f1faf 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 3.8E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_007565 18aaf84cc7945a48cc56798b323f1faf 346 Gene3D G3DSA:3.40.50.2300 67 310 1.6E-67 T 14-10-2018 D172_007565 18aaf84cc7945a48cc56798b323f1faf 346 Gene3D G3DSA:1.10.260.40 5 65 4.4E-24 T 14-10-2018 D172_007565 18aaf84cc7945a48cc56798b323f1faf 346 SUPERFAMILY SSF47413 5 64 2.74E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D172_007565 18aaf84cc7945a48cc56798b323f1faf 346 Pfam PF13377 Periplasmic binding protein-like domain 175 340 1.4E-33 T 14-10-2018 D172_007565 18aaf84cc7945a48cc56798b323f1faf 346 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 14-10-2018 D172_007565 18aaf84cc7945a48cc56798b323f1faf 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 53 2.3E-23 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_007565 18aaf84cc7945a48cc56798b323f1faf 346 Gene3D G3DSA:3.40.50.2300 167 296 1.6E-67 T 14-10-2018 D172_007565 18aaf84cc7945a48cc56798b323f1faf 346 SMART SM00354 6 76 1.2E-30 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_007565 18aaf84cc7945a48cc56798b323f1faf 346 SUPERFAMILY SSF53822 67 341 8.33E-71 T 14-10-2018 IPR028082 Periplasmic binding protein-like I D172_007470 1d1af5daad170524be15d5fe8cb254c3 275 Gene3D G3DSA:3.40.50.880 28 272 8.3E-65 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_007470 1d1af5daad170524be15d5fe8cb254c3 275 SUPERFAMILY SSF52317 42 270 9.61E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_007470 1d1af5daad170524be15d5fe8cb254c3 275 Pfam PF06283 Trehalose utilisation 44 265 8.4E-63 T 14-10-2018 IPR029010 ThuA-like domain D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 Gene3D G3DSA:3.30.565.10 414 569 3.7E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 SUPERFAMILY SSF47384 348 417 1.8E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 SMART SM00387 462 571 2.8E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 464 568 5.0E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 Gene3D G3DSA:3.30.450.20 54 173 1.7E-57 T 14-10-2018 D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 SUPERFAMILY SSF103190 84 180 1.45E-18 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 Pfam PF02743 Cache domain 31 271 1.2E-14 T 14-10-2018 IPR033479 Double Cache domain 1 D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 529 2.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 568 2.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 515 2.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 549 2.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 SMART SM00388 352 420 5.1E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 PIRSF PIRSF036431 2 576 4.0E-131 T 14-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 Gene3D G3DSA:1.10.287.130 330 413 3.1E-19 T 14-10-2018 D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 Gene3D G3DSA:3.30.450.20 42 277 1.7E-57 T 14-10-2018 D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 SUPERFAMILY SSF55874 412 567 3.67E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_019040 f554a7a7d55a920873ed3d03c2d25c88 576 Pfam PF00512 His Kinase A (phospho-acceptor) domain 354 416 6.6E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_006340 003c61c9857685692001d0dabbc5c6b5 758 SUPERFAMILY SSF47203 320 474 7.57E-24 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 D172_006340 003c61c9857685692001d0dabbc5c6b5 758 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 194 287 1.9E-9 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 D172_006340 003c61c9857685692001d0dabbc5c6b5 758 SUPERFAMILY SSF56645 77 312 1.01E-44 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 D172_006340 003c61c9857685692001d0dabbc5c6b5 758 Gene3D G3DSA:1.20.140.10 317 462 1.8E-95 T 14-10-2018 D172_006340 003c61c9857685692001d0dabbc5c6b5 758 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 317 462 2.7E-12 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 D172_006340 003c61c9857685692001d0dabbc5c6b5 758 Gene3D G3DSA:1.10.540.10 81 192 1.8E-95 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 D172_006340 003c61c9857685692001d0dabbc5c6b5 758 Pfam PF09317 Domain of unknown function (DUF1974) 471 753 2.3E-104 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 D172_006340 003c61c9857685692001d0dabbc5c6b5 758 Gene3D G3DSA:2.40.110.10 193 316 1.8E-95 T 14-10-2018 D172_006340 003c61c9857685692001d0dabbc5c6b5 758 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 79 189 2.0E-16 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 D172_005900 f932f5595796aad338df0139aa873c7f 614 Gene3D G3DSA:3.30.70.330 493 562 5.9E-11 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily D172_005900 f932f5595796aad338df0139aa873c7f 614 Gene3D G3DSA:3.40.50.300 5 211 1.5E-75 T 14-10-2018 D172_005900 f932f5595796aad338df0139aa873c7f 614 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D172_005900 f932f5595796aad338df0139aa873c7f 614 SMART SM00490 257 338 1.4E-31 T 14-10-2018 IPR001650 Helicase, C-terminal D172_005900 f932f5595796aad338df0139aa873c7f 614 Pfam PF03880 DbpA RNA binding domain 492 559 6.8E-21 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain D172_005900 f932f5595796aad338df0139aa873c7f 614 SUPERFAMILY SSF52540 146 352 3.82E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_005900 f932f5595796aad338df0139aa873c7f 614 Pfam PF00270 DEAD/DEAH box helicase 30 195 3.4E-49 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D172_005900 f932f5595796aad338df0139aa873c7f 614 Gene3D G3DSA:3.40.50.300 215 430 9.8E-50 T 14-10-2018 D172_005900 f932f5595796aad338df0139aa873c7f 614 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 564 43.15 T 14-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 D172_005900 f932f5595796aad338df0139aa873c7f 614 Pfam PF00271 Helicase conserved C-terminal domain 230 338 9.0E-29 T 14-10-2018 IPR001650 Helicase, C-terminal D172_005900 f932f5595796aad338df0139aa873c7f 614 SMART SM00487 24 222 9.6E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_005900 f932f5595796aad338df0139aa873c7f 614 SUPERFAMILY SSF52540 4 208 7.85E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_003725 6500971da6f24ac985ba8568a8203904 1027 Gene3D G3DSA:3.30.2090.10 712 799 2.5E-283 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_003725 6500971da6f24ac985ba8568a8203904 1027 SUPERFAMILY SSF82714 724 797 3.66E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_003725 6500971da6f24ac985ba8568a8203904 1027 PRINTS PR00702 Acriflavin resistance protein family signature 325 348 1.5E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_003725 6500971da6f24ac985ba8568a8203904 1027 PRINTS PR00702 Acriflavin resistance protein family signature 432 455 1.5E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_003725 6500971da6f24ac985ba8568a8203904 1027 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.5E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_003725 6500971da6f24ac985ba8568a8203904 1027 PRINTS PR00702 Acriflavin resistance protein family signature 379 403 1.5E-17 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_003725 6500971da6f24ac985ba8568a8203904 1027 Gene3D G3DSA:1.20.1640.10 8 500 2.5E-283 T 14-10-2018 D172_003725 6500971da6f24ac985ba8568a8203904 1027 SUPERFAMILY SSF82693 40 127 1.05E-18 T 14-10-2018 D172_003725 6500971da6f24ac985ba8568a8203904 1027 Pfam PF00873 AcrB/AcrD/AcrF family 1 1019 6.5E-178 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_003725 6500971da6f24ac985ba8568a8203904 1027 Gene3D G3DSA:3.30.70.1320 132 321 2.5E-283 T 14-10-2018 D172_003725 6500971da6f24ac985ba8568a8203904 1027 SUPERFAMILY SSF82693 136 319 1.45E-16 T 14-10-2018 D172_003725 6500971da6f24ac985ba8568a8203904 1027 SUPERFAMILY SSF82866 798 1023 1.06E-46 T 14-10-2018 D172_003725 6500971da6f24ac985ba8568a8203904 1027 Gene3D G3DSA:3.30.70.1430 558 664 2.5E-283 T 14-10-2018 D172_003725 6500971da6f24ac985ba8568a8203904 1027 Gene3D G3DSA:1.20.1640.10 501 1016 2.5E-283 T 14-10-2018 D172_003725 6500971da6f24ac985ba8568a8203904 1027 Gene3D G3DSA:3.30.70.1440 665 859 2.5E-283 T 14-10-2018 D172_003725 6500971da6f24ac985ba8568a8203904 1027 Gene3D G3DSA:3.30.70.1430 39 807 2.5E-283 T 14-10-2018 D172_003725 6500971da6f24ac985ba8568a8203904 1027 SUPERFAMILY SSF82866 287 482 2.49E-39 T 14-10-2018 D172_003725 6500971da6f24ac985ba8568a8203904 1027 SUPERFAMILY SSF82714 177 261 2.75E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_003725 6500971da6f24ac985ba8568a8203904 1027 Gene3D G3DSA:3.30.2090.10 173 264 2.5E-283 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_005865 59866c35541445f8b8c00bca6a845672 215 Pfam PF02798 Glutathione S-transferase, N-terminal domain 12 74 1.3E-9 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D172_005865 59866c35541445f8b8c00bca6a845672 215 Gene3D G3DSA:1.20.1050.10 84 191 9.4E-53 T 14-10-2018 D172_005865 59866c35541445f8b8c00bca6a845672 215 SUPERFAMILY SSF47616 83 196 1.12E-10 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D172_005865 59866c35541445f8b8c00bca6a845672 215 SUPERFAMILY SSF52833 4 84 6.77E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_005865 59866c35541445f8b8c00bca6a845672 215 Gene3D G3DSA:3.40.30.10 5 196 9.4E-53 T 14-10-2018 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 SUPERFAMILY SSF81886 620 890 6.67E-85 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 SUPERFAMILY SSF52540 417 618 5.57E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 Gene3D G3DSA:3.40.50.300 22 415 3.4E-174 T 14-10-2018 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 PRINTS PR00906 SecA protein signature 339 361 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 PRINTS PR00906 SecA protein signature 376 393 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 PRINTS PR00906 SecA protein signature 117 127 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 PRINTS PR00906 SecA protein signature 101 115 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 PRINTS PR00906 SecA protein signature 170 190 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 PRINTS PR00906 SecA protein signature 413 426 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 PRINTS PR00906 SecA protein signature 63 87 1.6E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 SMART SM00958 228 358 5.8E-79 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 Gene3D G3DSA:3.90.1440.10 229 368 3.4E-174 T 14-10-2018 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 Pfam PF07516 SecA Wing and Scaffold domain 617 830 1.4E-69 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 Pfam PF02810 SEC-C motif 882 900 4.3E-8 T 14-10-2018 IPR004027 SEC-C motif D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 Gene3D G3DSA:3.40.50.300 417 620 8.5E-87 T 14-10-2018 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 Gene3D G3DSA:1.10.3060.10 621 833 3.4E-78 T 14-10-2018 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 SMART SM00957 6 402 0.0 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.815 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 ProSitePatterns PS01312 SecA family signature. 500 515 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 Pfam PF01043 SecA preprotein cross-linking domain 232 358 9.3E-37 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 SUPERFAMILY SSF52540 4 415 5.77E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 SUPERFAMILY SSF81767 227 368 3.01E-42 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 D172_015980 00a80d48f3e4420d2e85192022b3e0c5 902 Pfam PF07517 SecA DEAD-like domain 7 402 2.4E-131 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 D172_013835 1772648e72bd0a7b31776053fcd98b74 1267 Gene3D G3DSA:3.40.309.10 785 978 5.4E-139 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D172_013835 1772648e72bd0a7b31776053fcd98b74 1267 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 518 1008 3.6E-199 T 14-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 D172_013835 1772648e72bd0a7b31776053fcd98b74 1267 Gene3D G3DSA:3.40.605.10 562 1009 5.4E-139 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D172_013835 1772648e72bd0a7b31776053fcd98b74 1267 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 67 180 7.3E-46 T 14-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 D172_013835 1772648e72bd0a7b31776053fcd98b74 1267 SUPERFAMILY SSF51730 183 526 2.39E-115 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like D172_013835 1772648e72bd0a7b31776053fcd98b74 1267 SUPERFAMILY SSF81935 13 182 4.71E-61 T 14-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 D172_013835 1772648e72bd0a7b31776053fcd98b74 1267 Gene3D G3DSA:3.40.605.10 1010 1221 1.1E-10 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D172_013835 1772648e72bd0a7b31776053fcd98b74 1267 PIRSF PIRSF000197 2 1263 0.0 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 D172_013835 1772648e72bd0a7b31776053fcd98b74 1267 Pfam PF00171 Aldehyde dehydrogenase family 563 1009 1.6E-114 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D172_013835 1772648e72bd0a7b31776053fcd98b74 1267 Pfam PF00171 Aldehyde dehydrogenase family 1018 1199 1.7E-7 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D172_013835 1772648e72bd0a7b31776053fcd98b74 1267 SUPERFAMILY SSF53720 547 1010 1.22E-123 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D172_013835 1772648e72bd0a7b31776053fcd98b74 1267 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 810 821 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 D172_013835 1772648e72bd0a7b31776053fcd98b74 1267 SUPERFAMILY SSF53720 1025 1200 7.46E-13 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D172_013835 1772648e72bd0a7b31776053fcd98b74 1267 Gene3D G3DSA:3.20.20.220 137 518 8.7E-138 T 14-10-2018 D172_013835 1772648e72bd0a7b31776053fcd98b74 1267 Pfam PF01619 Proline dehydrogenase 192 482 1.4E-95 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 D172_020575 856d59b77be55ef5c83af9db6a5c2265 570 Gene3D G3DSA:2.30.38.10 378 453 1.2E-26 T 14-10-2018 D172_020575 856d59b77be55ef5c83af9db6a5c2265 570 SUPERFAMILY SSF56801 18 555 2.49E-113 T 14-10-2018 D172_020575 856d59b77be55ef5c83af9db6a5c2265 570 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 546 1.9E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain D172_020575 856d59b77be55ef5c83af9db6a5c2265 570 Pfam PF00501 AMP-binding enzyme 42 458 2.6E-64 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_020575 856d59b77be55ef5c83af9db6a5c2265 570 Gene3D G3DSA:3.40.50.980 28 182 6.0E-27 T 14-10-2018 D172_020575 856d59b77be55ef5c83af9db6a5c2265 570 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_020575 856d59b77be55ef5c83af9db6a5c2265 570 Gene3D G3DSA:3.30.300.310 455 560 1.6E-22 T 14-10-2018 D172_020575 856d59b77be55ef5c83af9db6a5c2265 570 Gene3D G3DSA:3.40.50.980 206 377 5.1E-46 T 14-10-2018 D172_002565 c93aa92efa81777cf871fa49f1ce7f62 431 Gene3D G3DSA:3.10.50.40 177 387 5.7E-75 T 14-10-2018 D172_002565 c93aa92efa81777cf871fa49f1ce7f62 431 Hamap MF_01183 Chaperone SurA [surA]. 11 429 33.491 T 14-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 D172_002565 c93aa92efa81777cf871fa49f1ce7f62 431 Gene3D G3DSA:1.10.4030.10 23 150 7.1E-31 T 14-10-2018 D172_002565 c93aa92efa81777cf871fa49f1ce7f62 431 SUPERFAMILY SSF54534 174 278 6.34E-23 T 14-10-2018 D172_002565 c93aa92efa81777cf871fa49f1ce7f62 431 Pfam PF00639 PPIC-type PPIASE domain 290 381 2.3E-22 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 D172_002565 c93aa92efa81777cf871fa49f1ce7f62 431 Pfam PF13616 PPIC-type PPIASE domain 162 275 6.3E-19 T 14-10-2018 D172_002565 c93aa92efa81777cf871fa49f1ce7f62 431 Pfam PF09312 SurA N-terminal domain 27 143 2.7E-33 T 14-10-2018 IPR015391 SurA N-terminal D172_002565 c93aa92efa81777cf871fa49f1ce7f62 431 SUPERFAMILY SSF54534 283 385 1.11E-29 T 14-10-2018 D172_002565 c93aa92efa81777cf871fa49f1ce7f62 431 Gene3D G3DSA:3.10.50.40 284 386 5.7E-75 T 14-10-2018 D172_002565 c93aa92efa81777cf871fa49f1ce7f62 431 SUPERFAMILY SSF109998 27 203 3.14E-38 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily D172_010915 2e14472c7d0e93ab8901d89d5c683639 294 Gene3D G3DSA:3.40.50.10330 24 289 7.3E-89 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 D172_010915 2e14472c7d0e93ab8901d89d5c683639 294 SUPERFAMILY SSF111331 7 292 7.98E-87 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily D172_010915 2e14472c7d0e93ab8901d89d5c683639 294 Gene3D G3DSA:2.60.200.30 129 266 7.3E-89 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 D172_010915 2e14472c7d0e93ab8901d89d5c683639 294 Pfam PF01513 ATP-NAD kinase 7 273 2.7E-63 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 D172_010915 2e14472c7d0e93ab8901d89d5c683639 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 32.978 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 D172_008335 1347476369fdfcf3e8deaf3be52019a7 115 SUPERFAMILY SSF81343 7 115 5.01E-25 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_008335 1347476369fdfcf3e8deaf3be52019a7 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 8.5E-32 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 D172_008335 1347476369fdfcf3e8deaf3be52019a7 115 Gene3D G3DSA:1.20.1300.10 1 115 5.8E-27 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_008335 1347476369fdfcf3e8deaf3be52019a7 115 PIRSF PIRSF000169 1 115 2.3E-38 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 D172_007040 9722e9959d393b5279693339a0b8cedb 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007040 9722e9959d393b5279693339a0b8cedb 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007040 9722e9959d393b5279693339a0b8cedb 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.2E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007040 9722e9959d393b5279693339a0b8cedb 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 191 3.1E-5 T 14-10-2018 D172_007040 9722e9959d393b5279693339a0b8cedb 248 SUPERFAMILY SSF51735 8 247 1.66E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_007040 9722e9959d393b5279693339a0b8cedb 248 Gene3D G3DSA:3.40.50.720 1 248 5.9E-88 T 14-10-2018 D172_007040 9722e9959d393b5279693339a0b8cedb 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 12 246 1.5E-99 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D172_007040 9722e9959d393b5279693339a0b8cedb 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D172_007040 9722e9959d393b5279693339a0b8cedb 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 243 5.1E-66 T 14-10-2018 D172_007040 9722e9959d393b5279693339a0b8cedb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.0E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007040 9722e9959d393b5279693339a0b8cedb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 4.0E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007040 9722e9959d393b5279693339a0b8cedb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.0E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007040 9722e9959d393b5279693339a0b8cedb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.0E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007040 9722e9959d393b5279693339a0b8cedb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.0E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007040 9722e9959d393b5279693339a0b8cedb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.0E-52 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_003555 5c97c4341656ba3f300bb61904c511aa 625 Gene3D G3DSA:3.40.50.2300 358 592 1.8E-52 T 14-10-2018 D172_003555 5c97c4341656ba3f300bb61904c511aa 625 Gene3D G3DSA:1.25.40.650 160 255 3.0E-12 T 14-10-2018 D172_003555 5c97c4341656ba3f300bb61904c511aa 625 Pfam PF04348 LppC putative lipoprotein 43 597 3.8E-82 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA D172_003555 5c97c4341656ba3f300bb61904c511aa 625 Gene3D G3DSA:3.40.50.2300 259 591 1.8E-52 T 14-10-2018 D172_003555 5c97c4341656ba3f300bb61904c511aa 625 SUPERFAMILY SSF53822 258 603 1.22E-61 T 14-10-2018 IPR028082 Periplasmic binding protein-like I D172_015160 d67d31d946cd5988ba60c4bdd3fbe468 141 Gene3D G3DSA:3.40.50.620 2 136 1.8E-36 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_015160 d67d31d946cd5988ba60c4bdd3fbe468 141 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 70 2.2E-20 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D172_015160 d67d31d946cd5988ba60c4bdd3fbe468 141 SUPERFAMILY SSF52374 1 134 4.61E-27 T 14-10-2018 D172_015160 d67d31d946cd5988ba60c4bdd3fbe468 141 Pfam PF01467 Cytidylyltransferase-like 6 131 5.6E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D172_017985 5a13178006ea22d0052b93fd773e54fb 507 PRINTS PR00084 Mannitol dehydrogenase signature 233 246 9.9E-19 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 D172_017985 5a13178006ea22d0052b93fd773e54fb 507 PRINTS PR00084 Mannitol dehydrogenase signature 263 278 9.9E-19 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 D172_017985 5a13178006ea22d0052b93fd773e54fb 507 PRINTS PR00084 Mannitol dehydrogenase signature 40 50 9.9E-19 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 D172_017985 5a13178006ea22d0052b93fd773e54fb 507 PRINTS PR00084 Mannitol dehydrogenase signature 194 207 9.9E-19 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 D172_017985 5a13178006ea22d0052b93fd773e54fb 507 SUPERFAMILY SSF51735 15 296 4.33E-100 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_017985 5a13178006ea22d0052b93fd773e54fb 507 Gene3D G3DSA:1.10.1040.10 297 505 1.3E-60 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 D172_017985 5a13178006ea22d0052b93fd773e54fb 507 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 233 245 - T 14-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 D172_017985 5a13178006ea22d0052b93fd773e54fb 507 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 39 203 4.8E-41 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 D172_017985 5a13178006ea22d0052b93fd773e54fb 507 Gene3D G3DSA:3.40.50.720 13 296 9.1E-110 T 14-10-2018 D172_017985 5a13178006ea22d0052b93fd773e54fb 507 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 231 475 2.5E-70 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 D172_017985 5a13178006ea22d0052b93fd773e54fb 507 SUPERFAMILY SSF48179 298 491 4.76E-51 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_018970 504baf8bdb273a5119a89317f596378f 138 Pfam PF01124 MAPEG family 7 133 1.5E-19 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein D172_018970 504baf8bdb273a5119a89317f596378f 138 Gene3D G3DSA:1.20.120.550 3 138 1.4E-19 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily D172_018970 504baf8bdb273a5119a89317f596378f 138 SUPERFAMILY SSF161084 5 129 2.94E-20 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily D172_003580 79ab198b94de1a61ef5d485972b41da4 346 Pfam PF13551 Winged helix-turn helix 11 74 2.4E-20 T 14-10-2018 D172_003580 79ab198b94de1a61ef5d485972b41da4 346 SUPERFAMILY SSF53098 160 335 3.64E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_003580 79ab198b94de1a61ef5d485972b41da4 346 Gene3D G3DSA:3.30.420.10 161 325 1.8E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_003580 79ab198b94de1a61ef5d485972b41da4 346 SUPERFAMILY SSF46689 18 114 3.23E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_003580 79ab198b94de1a61ef5d485972b41da4 346 Pfam PF00665 Integrase core domain 161 283 6.2E-20 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_001015 6d84b82e177b617bf75721152db85ea2 355 Gene3D G3DSA:3.40.50.720 118 242 6.0E-10 T 14-10-2018 D172_001015 6d84b82e177b617bf75721152db85ea2 355 SUPERFAMILY SSF81324 17 130 1.31E-15 T 14-10-2018 D172_001015 6d84b82e177b617bf75721152db85ea2 355 Gene3D G3DSA:1.10.287.70 1 104 1.9E-13 T 14-10-2018 D172_001015 6d84b82e177b617bf75721152db85ea2 355 Pfam PF07885 Ion channel 28 103 4.3E-12 T 14-10-2018 IPR013099 Potassium channel domain D172_010965 385ef2458d424b115cdbd6d590592bb8 441 Pfam PF00158 Sigma-54 interaction domain 154 320 3.4E-64 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D172_010965 385ef2458d424b115cdbd6d590592bb8 441 Gene3D G3DSA:3.40.50.2300 3 125 1.1E-24 T 14-10-2018 D172_010965 385ef2458d424b115cdbd6d590592bb8 441 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D172_010965 385ef2458d424b115cdbd6d590592bb8 441 SMART SM00448 3 119 3.6E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_010965 385ef2458d424b115cdbd6d590592bb8 441 Gene3D G3DSA:1.10.10.60 398 441 9.0E-9 T 14-10-2018 D172_010965 385ef2458d424b115cdbd6d590592bb8 441 SUPERFAMILY SSF52172 3 198 4.55E-31 T 14-10-2018 IPR011006 CheY-like superfamily D172_010965 385ef2458d424b115cdbd6d590592bb8 441 SUPERFAMILY SSF46689 358 440 3.94E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_010965 385ef2458d424b115cdbd6d590592bb8 441 Gene3D G3DSA:1.10.8.60 326 397 2.7E-13 T 14-10-2018 D172_010965 385ef2458d424b115cdbd6d590592bb8 441 Gene3D G3DSA:3.40.50.300 132 325 5.2E-58 T 14-10-2018 D172_010965 385ef2458d424b115cdbd6d590592bb8 441 SMART SM00382 174 317 6.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_010965 385ef2458d424b115cdbd6d590592bb8 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 440 7.1E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_010965 385ef2458d424b115cdbd6d590592bb8 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 403 420 7.1E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_010965 385ef2458d424b115cdbd6d590592bb8 441 Pfam PF00072 Response regulator receiver domain 5 116 1.6E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_010965 385ef2458d424b115cdbd6d590592bb8 441 Pfam PF02954 Bacterial regulatory protein, Fis family 402 436 1.5E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_010965 385ef2458d424b115cdbd6d590592bb8 441 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site D172_010965 385ef2458d424b115cdbd6d590592bb8 441 SUPERFAMILY SSF52540 154 386 4.34E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_009230 cf594e8186b08f5e4cfb5a52a34d4f99 340 SMART SM00829 8 335 2.3E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D172_009230 cf594e8186b08f5e4cfb5a52a34d4f99 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 D172_009230 cf594e8186b08f5e4cfb5a52a34d4f99 340 Gene3D G3DSA:3.90.180.10 21 325 3.7E-92 T 14-10-2018 D172_009230 cf594e8186b08f5e4cfb5a52a34d4f99 340 Pfam PF00107 Zinc-binding dehydrogenase 172 298 2.0E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D172_009230 cf594e8186b08f5e4cfb5a52a34d4f99 340 Gene3D G3DSA:3.40.50.720 150 282 3.7E-92 T 14-10-2018 D172_009230 cf594e8186b08f5e4cfb5a52a34d4f99 340 SUPERFAMILY SSF50129 1 169 2.74E-45 T 14-10-2018 IPR011032 GroES-like superfamily D172_009230 cf594e8186b08f5e4cfb5a52a34d4f99 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 132 1.0E-30 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D172_009230 cf594e8186b08f5e4cfb5a52a34d4f99 340 SUPERFAMILY SSF51735 135 303 2.12E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_018920 7eb59f5f93257ba484ee390dd6f80c6f 433 Gene3D G3DSA:2.60.120.10 269 398 8.4E-64 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_018920 7eb59f5f93257ba484ee390dd6f80c6f 433 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 5 428 1.1E-198 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 D172_018920 7eb59f5f93257ba484ee390dd6f80c6f 433 SUPERFAMILY SSF51182 4 431 1.34E-165 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily D172_018920 7eb59f5f93257ba484ee390dd6f80c6f 433 Pfam PF04209 homogentisate 1,2-dioxygenase 6 428 7.6E-203 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 D172_021100 bbf2f03d6888449610cf8bdeda210f22 234 Pfam PF00149 Calcineurin-like phosphoesterase 24 190 1.5E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D172_021100 bbf2f03d6888449610cf8bdeda210f22 234 Gene3D G3DSA:3.60.21.10 13 227 2.2E-38 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like D172_021100 bbf2f03d6888449610cf8bdeda210f22 234 SUPERFAMILY SSF56300 14 225 2.89E-29 T 14-10-2018 D172_014010 92b9e4224c454d5c2171b0e6a8442c6b 206 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 202 34.887 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like D172_014010 92b9e4224c454d5c2171b0e6a8442c6b 206 SUPERFAMILY SSF52507 6 201 6.93E-58 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 D172_014010 92b9e4224c454d5c2171b0e6a8442c6b 206 Pfam PF02441 Flavoprotein 6 181 3.2E-24 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 D172_014010 92b9e4224c454d5c2171b0e6a8442c6b 206 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 6 200 5.9E-59 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like D172_014010 92b9e4224c454d5c2171b0e6a8442c6b 206 Gene3D G3DSA:3.40.50.1950 1 203 4.9E-78 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 D172_008350 775606ac439808536b45c98f3fa7820b 939 Gene3D G3DSA:3.40.50.12470 557 803 3.1E-170 T 14-10-2018 D172_008350 775606ac439808536b45c98f3fa7820b 939 Pfam PF00676 Dehydrogenase E1 component 220 518 1.3E-50 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 D172_008350 775606ac439808536b45c98f3fa7820b 939 Gene3D G3DSA:3.40.50.11610 724 930 3.1E-170 T 14-10-2018 D172_008350 775606ac439808536b45c98f3fa7820b 939 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 3.3E-16 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 D172_008350 775606ac439808536b45c98f3fa7820b 939 PIRSF PIRSF000157 1 935 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 D172_008350 775606ac439808536b45c98f3fa7820b 939 SUPERFAMILY SSF52518 121 528 1.18E-83 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_008350 775606ac439808536b45c98f3fa7820b 939 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 8.9E-54 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 D172_008350 775606ac439808536b45c98f3fa7820b 939 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 1.1E-63 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D172_008350 775606ac439808536b45c98f3fa7820b 939 SMART SM00861 594 787 1.7E-62 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D172_008350 775606ac439808536b45c98f3fa7820b 939 Gene3D G3DSA:3.40.50.970 168 534 3.9E-147 T 14-10-2018 D172_008350 775606ac439808536b45c98f3fa7820b 939 SUPERFAMILY SSF52518 577 794 3.95E-52 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_008350 775606ac439808536b45c98f3fa7820b 939 Gene3D G3DSA:1.10.287.1150 86 167 2.9E-28 T 14-10-2018 D172_008350 775606ac439808536b45c98f3fa7820b 939 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 D172_018525 72732d94a8775fb928cfd5deb5984a34 189 PIRSF PIRSF000239 1 189 3.7E-53 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D172_018525 72732d94a8775fb928cfd5deb5984a34 189 Gene3D G3DSA:3.40.30.10 1 188 2.3E-62 T 14-10-2018 D172_018525 72732d94a8775fb928cfd5deb5984a34 189 TIGRFAM TIGR03137 AhpC: peroxiredoxin 4 189 4.2E-103 T 14-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 D172_018525 72732d94a8775fb928cfd5deb5984a34 189 SUPERFAMILY SSF52833 5 188 1.91E-55 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_018525 72732d94a8775fb928cfd5deb5984a34 189 Pfam PF00578 AhpC/TSA family 8 134 1.1E-32 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D172_018525 72732d94a8775fb928cfd5deb5984a34 189 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 158 183 2.3E-6 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D172_002520 6d3fcd7c5c8f491b9ba2dbf27ff54a45 385 Gene3D G3DSA:1.10.10.10 25 90 2.9E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_002520 6d3fcd7c5c8f491b9ba2dbf27ff54a45 385 SUPERFAMILY SSF53067 105 381 3.5E-29 T 14-10-2018 D172_002520 6d3fcd7c5c8f491b9ba2dbf27ff54a45 385 SUPERFAMILY SSF46785 26 91 5.07E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_002520 6d3fcd7c5c8f491b9ba2dbf27ff54a45 385 Gene3D G3DSA:3.30.420.40 220 342 4.1E-35 T 14-10-2018 D172_002520 6d3fcd7c5c8f491b9ba2dbf27ff54a45 385 Gene3D G3DSA:3.30.420.40 97 219 4.1E-35 T 14-10-2018 D172_002520 6d3fcd7c5c8f491b9ba2dbf27ff54a45 385 Pfam PF00480 ROK family 104 259 6.5E-20 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 D172_002555 823edd5bca0ea1225a96556f2aef8f7a 268 Gene3D G3DSA:3.40.50.150 1 198 4.0E-66 T 14-10-2018 D172_002555 823edd5bca0ea1225a96556f2aef8f7a 268 Gene3D G3DSA:1.10.8.100 201 267 4.0E-23 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 D172_002555 823edd5bca0ea1225a96556f2aef8f7a 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 D172_002555 823edd5bca0ea1225a96556f2aef8f7a 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 263 1.2E-75 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm D172_002555 823edd5bca0ea1225a96556f2aef8f7a 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 9 262 1.9E-85 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 D172_002555 823edd5bca0ea1225a96556f2aef8f7a 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 54.188 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 D172_002555 823edd5bca0ea1225a96556f2aef8f7a 268 SUPERFAMILY SSF53335 8 265 9.41E-77 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_002555 823edd5bca0ea1225a96556f2aef8f7a 268 SMART SM00650 25 197 3.5E-85 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 D172_015900 15e63db0b1a7317938ec5efe0debe024 728 Pfam PF00270 DEAD/DEAH box helicase 209 365 2.9E-15 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D172_015900 15e63db0b1a7317938ec5efe0debe024 728 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 727 24.211 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 D172_015900 15e63db0b1a7317938ec5efe0debe024 728 Gene3D G3DSA:3.40.50.300 184 379 1.9E-72 T 14-10-2018 D172_015900 15e63db0b1a7317938ec5efe0debe024 728 Gene3D G3DSA:1.10.8.630 3 117 5.5E-35 T 14-10-2018 D172_015900 15e63db0b1a7317938ec5efe0debe024 728 TIGRFAM TIGR00595 priA: primosomal protein N' 220 725 3.8E-178 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 D172_015900 15e63db0b1a7317938ec5efe0debe024 728 SMART SM00487 195 392 1.9E-22 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_015900 15e63db0b1a7317938ec5efe0debe024 728 SUPERFAMILY SSF52540 215 600 6.03E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_015900 15e63db0b1a7317938ec5efe0debe024 728 Pfam PF00271 Helicase conserved C-terminal domain 515 589 1.9E-5 T 14-10-2018 IPR001650 Helicase, C-terminal D172_015900 15e63db0b1a7317938ec5efe0debe024 728 SMART SM00490 492 589 1.2E-8 T 14-10-2018 IPR001650 Helicase, C-terminal D172_015450 2a1d6533bd3b702e073a206feb669311 1864 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 1770 1814 4.9E-6 T 14-10-2018 IPR013431 Delta-60 repeat D172_015450 2a1d6533bd3b702e073a206feb669311 1864 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 1501 1538 0.0013 T 14-10-2018 IPR013431 Delta-60 repeat D172_015450 2a1d6533bd3b702e073a206feb669311 1864 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 1089 1131 5.1E-4 T 14-10-2018 IPR013431 Delta-60 repeat D172_015450 2a1d6533bd3b702e073a206feb669311 1864 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 1607 1653 3.9E-6 T 14-10-2018 IPR013431 Delta-60 repeat D172_015450 2a1d6533bd3b702e073a206feb669311 1864 TIGRFAM TIGR02608 delta_60_rpt: delta-60 repeat domain 1554 1596 7.4E-7 T 14-10-2018 IPR013431 Delta-60 repeat D172_015450 2a1d6533bd3b702e073a206feb669311 1864 SMART SM00112 974 1056 5.7E-6 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 D172_015450 2a1d6533bd3b702e073a206feb669311 1864 SUPERFAMILY SSF49313 958 1050 6.54E-14 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 D172_015450 2a1d6533bd3b702e073a206feb669311 1864 Gene3D G3DSA:2.60.40.60 950 1049 3.9E-15 T 14-10-2018 D172_015450 2a1d6533bd3b702e073a206feb669311 1864 Pfam PF17164 Domain of unknown function (DUF5122) beta-propeller 1554 1588 6.3E-4 T 14-10-2018 IPR013431 Delta-60 repeat D172_015450 2a1d6533bd3b702e073a206feb669311 1864 Gene3D G3DSA:2.60.40.10 178 273 4.2E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_015450 2a1d6533bd3b702e073a206feb669311 1864 Pfam PF00028 Cadherin domain 961 1048 1.1E-9 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 D172_016745 a8315be9a426725a248626394da6e429 71 Hamap MF_00715 Protein SlyX [slyX]. 3 71 15.566 T 14-10-2018 IPR007236 SlyX D172_016745 a8315be9a426725a248626394da6e429 71 Pfam PF04102 SlyX 5 71 6.5E-20 T 14-10-2018 IPR007236 SlyX D172_005030 6c336ba729206cfc805e42d17de629b3 557 Gene3D G3DSA:3.40.50.300 289 557 1.6E-74 T 14-10-2018 D172_005030 6c336ba729206cfc805e42d17de629b3 557 Gene3D G3DSA:3.40.50.300 5 288 2.5E-85 T 14-10-2018 D172_005030 6c336ba729206cfc805e42d17de629b3 557 Pfam PF00005 ABC transporter 25 194 2.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_005030 6c336ba729206cfc805e42d17de629b3 557 Pfam PF00005 ABC transporter 343 476 2.3E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_005030 6c336ba729206cfc805e42d17de629b3 557 Pfam PF12848 ABC transporter 233 308 2.0E-12 T 14-10-2018 IPR032781 ABC-transporter extension domain D172_005030 6c336ba729206cfc805e42d17de629b3 557 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_005030 6c336ba729206cfc805e42d17de629b3 557 SMART SM00382 351 529 1.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_005030 6c336ba729206cfc805e42d17de629b3 557 SMART SM00382 34 239 1.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_005030 6c336ba729206cfc805e42d17de629b3 557 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 6 556 7.2E-290 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 D172_005030 6c336ba729206cfc805e42d17de629b3 557 SUPERFAMILY SSF52540 305 527 3.31E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_005030 6c336ba729206cfc805e42d17de629b3 557 SUPERFAMILY SSF52540 11 246 1.1E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_016820 6d70ab53da6db9e847e6e7b49f3d44a4 613 SUPERFAMILY SSF48371 472 612 1.32E-38 T 14-10-2018 IPR016024 Armadillo-type fold D172_016820 6d70ab53da6db9e847e6e7b49f3d44a4 613 SUPERFAMILY SSF63737 23 221 1.02E-42 T 14-10-2018 D172_016820 6d70ab53da6db9e847e6e7b49f3d44a4 613 Gene3D G3DSA:2.60.40.1730 35 221 3.0E-58 T 14-10-2018 D172_016820 6d70ab53da6db9e847e6e7b49f3d44a4 613 SUPERFAMILY SSF55486 231 466 4.69E-61 T 14-10-2018 D172_016820 6d70ab53da6db9e847e6e7b49f3d44a4 613 Gene3D G3DSA:1.10.1740.60 222 318 1.2E-37 T 14-10-2018 D172_016820 6d70ab53da6db9e847e6e7b49f3d44a4 613 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 502 609 9.5E-24 T 14-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 D172_016820 6d70ab53da6db9e847e6e7b49f3d44a4 613 SMART SM01263 474 612 8.3E-47 T 14-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 D172_016820 6d70ab53da6db9e847e6e7b49f3d44a4 613 Gene3D G3DSA:1.10.390.10 319 473 1.2E-53 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily D172_016820 6d70ab53da6db9e847e6e7b49f3d44a4 613 Pfam PF01433 Peptidase family M1 domain 232 442 3.8E-48 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_016820 6d70ab53da6db9e847e6e7b49f3d44a4 613 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 205 220 6.5E-17 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_016820 6d70ab53da6db9e847e6e7b49f3d44a4 613 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 160 175 6.5E-17 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_016820 6d70ab53da6db9e847e6e7b49f3d44a4 613 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 325 337 6.5E-17 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_016820 6d70ab53da6db9e847e6e7b49f3d44a4 613 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 306 321 6.5E-17 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_016820 6d70ab53da6db9e847e6e7b49f3d44a4 613 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 279 289 6.5E-17 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_016820 6d70ab53da6db9e847e6e7b49f3d44a4 613 Gene3D G3DSA:1.25.40.320 474 613 2.0E-47 T 14-10-2018 IPR038502 Peptidase M1 LTA-4 hydrolase/aminopeptidase, C-terminal domain superfamily D172_005510 460aefeea69ddc27882139f2c1c8993f 139 Gene3D G3DSA:3.30.700.10 8 135 1.2E-22 T 14-10-2018 D172_005510 460aefeea69ddc27882139f2c1c8993f 139 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 29 114 3.2E-19 T 14-10-2018 IPR031982 Type IV minor pilin ComP D172_005510 460aefeea69ddc27882139f2c1c8993f 139 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_005510 460aefeea69ddc27882139f2c1c8993f 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 1.9E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_005510 460aefeea69ddc27882139f2c1c8993f 139 PRINTS PR00813 Bacterial general secretion pathway protein G signature 43 61 6.0E-10 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 D172_005510 460aefeea69ddc27882139f2c1c8993f 139 PRINTS PR00813 Bacterial general secretion pathway protein G signature 7 32 6.0E-10 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 D172_005510 460aefeea69ddc27882139f2c1c8993f 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 1.7E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_005510 460aefeea69ddc27882139f2c1c8993f 139 SUPERFAMILY SSF54523 8 122 4.34E-21 T 14-10-2018 D172_006265 9920dcaeda9f057ad89add41b3ad7926 198 Gene3D G3DSA:2.160.20.80 3 198 1.8E-44 T 14-10-2018 D172_006265 9920dcaeda9f057ad89add41b3ad7926 198 Pfam PF13599 Pentapeptide repeats (9 copies) 98 162 1.5E-11 T 14-10-2018 IPR001646 Pentapeptide repeat D172_006265 9920dcaeda9f057ad89add41b3ad7926 198 Pfam PF13599 Pentapeptide repeats (9 copies) 27 89 1.1E-14 T 14-10-2018 IPR001646 Pentapeptide repeat D172_006265 9920dcaeda9f057ad89add41b3ad7926 198 SUPERFAMILY SSF141571 17 196 1.83E-35 T 14-10-2018 D172_012460 2ca981bc1102899bc48336685eda1cd0 148 Gene3D G3DSA:2.60.40.790 34 140 2.4E-23 T 14-10-2018 IPR008978 HSP20-like chaperone D172_012460 2ca981bc1102899bc48336685eda1cd0 148 Pfam PF00011 Hsp20/alpha crystallin family 44 139 3.3E-19 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain D172_012460 2ca981bc1102899bc48336685eda1cd0 148 SUPERFAMILY SSF49764 7 139 2.89E-20 T 14-10-2018 IPR008978 HSP20-like chaperone D172_010230 21f7c508f336e6517ec17139100a8063 296 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 215 9.5E-20 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 D172_010230 21f7c508f336e6517ec17139100a8063 296 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 292 3.7E-105 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 D172_010230 21f7c508f336e6517ec17139100a8063 296 SUPERFAMILY SSF51735 1 272 4.43E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_010230 21f7c508f336e6517ec17139100a8063 296 Pfam PF08338 Domain of unknown function (DUF1731) 249 295 2.8E-16 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 D172_010230 21f7c508f336e6517ec17139100a8063 296 Gene3D G3DSA:3.40.50.720 2 296 1.3E-73 T 14-10-2018 D172_001890 d58887f228f1f5577df84d5cd5d07bee 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D172_001890 d58887f228f1f5577df84d5cd5d07bee 279 SUPERFAMILY SSF53335 9 272 9.97E-85 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_001890 d58887f228f1f5577df84d5cd5d07bee 279 Gene3D G3DSA:3.40.50.150 1 279 3.0E-101 T 14-10-2018 D172_001890 d58887f228f1f5577df84d5cd5d07bee 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 38.368 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 D172_001890 d58887f228f1f5577df84d5cd5d07bee 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 274 4.0E-79 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 D172_008270 bb7ed2ed5dcfadbe01bf475f45a6b223 580 Pfam PF11949 Protein of unknown function (DUF3466) 2 576 7.3E-136 T 14-10-2018 IPR022562 Protein of unknown function DUF3466 D172_008270 bb7ed2ed5dcfadbe01bf475f45a6b223 580 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 559 576 0.0027 T 14-10-2018 IPR020008 GlyGly-CTERM domain D172_004275 6e61d899f66c57e3563feeba6ddea70b 712 SMART SM00304 499 554 62.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_004275 6e61d899f66c57e3563feeba6ddea70b 712 SMART SM00304 433 488 0.033 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_004275 6e61d899f66c57e3563feeba6ddea70b 712 SMART SM00388 489 554 4.1E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_004275 6e61d899f66c57e3563feeba6ddea70b 712 Pfam PF00512 His Kinase A (phospho-acceptor) domain 491 553 3.5E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_004275 6e61d899f66c57e3563feeba6ddea70b 712 Gene3D G3DSA:1.10.287.130 495 554 5.2E-9 T 14-10-2018 D172_004275 6e61d899f66c57e3563feeba6ddea70b 712 Gene3D G3DSA:3.30.565.10 559 711 7.5E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_004275 6e61d899f66c57e3563feeba6ddea70b 712 Gene3D G3DSA:1.20.1480.50 392 494 2.2E-8 T 14-10-2018 D172_004275 6e61d899f66c57e3563feeba6ddea70b 712 Gene3D G3DSA:2.60.40.1190 79 261 6.2E-14 T 14-10-2018 D172_004275 6e61d899f66c57e3563feeba6ddea70b 712 SUPERFAMILY SSF47384 474 553 1.26E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_004275 6e61d899f66c57e3563feeba6ddea70b 712 SMART SM00387 598 711 8.7E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_004275 6e61d899f66c57e3563feeba6ddea70b 712 SUPERFAMILY SSF49344 78 236 3.18E-12 T 14-10-2018 D172_004275 6e61d899f66c57e3563feeba6ddea70b 712 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 600 709 4.6E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_004275 6e61d899f66c57e3563feeba6ddea70b 712 SUPERFAMILY SSF55874 547 709 9.17E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_004275 6e61d899f66c57e3563feeba6ddea70b 712 TIGRFAM TIGR03785 marine_sort_HK: proteobacterial dedicated sortase system histidine kinase 6 708 0.0 T 14-10-2018 IPR022510 Sortase system, histidine kinase D172_019225 8b12e61fa3b6a7a9111ea76b9170959c 88 Pfam PF01197 Ribosomal protein L31 1 78 1.2E-26 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_019225 8b12e61fa3b6a7a9111ea76b9170959c 88 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.3E-19 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_019225 8b12e61fa3b6a7a9111ea76b9170959c 88 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.8E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_019225 8b12e61fa3b6a7a9111ea76b9170959c 88 PRINTS PR01249 Ribosomal protein L31 signature 59 77 7.8E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_019225 8b12e61fa3b6a7a9111ea76b9170959c 88 PRINTS PR01249 Ribosomal protein L31 signature 44 59 7.8E-17 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_019225 8b12e61fa3b6a7a9111ea76b9170959c 88 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_019225 8b12e61fa3b6a7a9111ea76b9170959c 88 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 26.983 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_019225 8b12e61fa3b6a7a9111ea76b9170959c 88 SUPERFAMILY SSF143800 1 79 6.28E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_019225 8b12e61fa3b6a7a9111ea76b9170959c 88 Gene3D G3DSA:2.30.170.50 1 83 1.5E-24 T 14-10-2018 D172_013430 26db139bfef2b06ab700b8b5f87251cd 571 PRINTS PR01009 Flagellar M-ring protein signature 171 185 3.7E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 D172_013430 26db139bfef2b06ab700b8b5f87251cd 571 PRINTS PR01009 Flagellar M-ring protein signature 364 388 3.7E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 D172_013430 26db139bfef2b06ab700b8b5f87251cd 571 PRINTS PR01009 Flagellar M-ring protein signature 139 157 3.7E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 D172_013430 26db139bfef2b06ab700b8b5f87251cd 571 PRINTS PR01009 Flagellar M-ring protein signature 284 302 3.7E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 D172_013430 26db139bfef2b06ab700b8b5f87251cd 571 PRINTS PR01009 Flagellar M-ring protein signature 214 232 3.7E-22 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 D172_013430 26db139bfef2b06ab700b8b5f87251cd 571 Pfam PF08345 Flagellar M-ring protein C-terminal 271 440 1.3E-42 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal D172_013430 26db139bfef2b06ab700b8b5f87251cd 571 Gene3D G3DSA:3.30.300.30 140 239 1.4E-9 T 14-10-2018 D172_013430 26db139bfef2b06ab700b8b5f87251cd 571 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 40 570 5.0E-72 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 D172_013430 26db139bfef2b06ab700b8b5f87251cd 571 Pfam PF01514 Secretory protein of YscJ/FliF family 51 238 1.5E-53 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF D172_013430 26db139bfef2b06ab700b8b5f87251cd 571 PIRSF PIRSF004862 22 571 1.5E-125 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 D172_014460 69c4d866176655d438c3a66806f5e962 354 PIRSF PIRSF001359 1 329 1.1E-80 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 D172_014460 69c4d866176655d438c3a66806f5e962 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 328 2.5E-91 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 D172_014460 69c4d866176655d438c3a66806f5e962 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 1.8E-192 T 14-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 D172_014460 69c4d866176655d438c3a66806f5e962 354 SUPERFAMILY SSF51569 3 329 3.52E-106 T 14-10-2018 D172_014460 69c4d866176655d438c3a66806f5e962 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 D172_014460 69c4d866176655d438c3a66806f5e962 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 328 2.2E-94 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 D172_014460 69c4d866176655d438c3a66806f5e962 354 Gene3D G3DSA:3.20.20.70 1 354 6.6E-151 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_005850 26c342d29c68055cfcdd982530d2bba4 381 Pfam PF01764 Lipase (class 3) 79 204 1.5E-21 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 D172_005850 26c342d29c68055cfcdd982530d2bba4 381 SUPERFAMILY SSF53474 70 212 3.18E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_005850 26c342d29c68055cfcdd982530d2bba4 381 Gene3D G3DSA:3.40.50.1820 36 276 1.6E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_018935 ee46a7f92d846210545f907f0c53c284 1057 Pfam PF13620 Carboxypeptidase regulatory-like domain 33 112 2.6E-10 T 14-10-2018 D172_018935 ee46a7f92d846210545f907f0c53c284 1057 SUPERFAMILY SSF56935 118 1002 1.43E-56 T 14-10-2018 D172_018935 ee46a7f92d846210545f907f0c53c284 1057 Pfam PF00593 TonB dependent receptor 450 1022 2.6E-5 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_015655 f4292dc2bbfb427e227afa045bb7401f 326 Gene3D G3DSA:1.10.1750.10 221 325 7.6E-12 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 D172_015655 f4292dc2bbfb427e227afa045bb7401f 326 SUPERFAMILY SSF48295 222 322 9.68E-13 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 D172_015655 f4292dc2bbfb427e227afa045bb7401f 326 SMART SM01321 9 123 2.1E-38 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D172_015655 f4292dc2bbfb427e227afa045bb7401f 326 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 233 290 4.9E-6 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 D172_015655 f4292dc2bbfb427e227afa045bb7401f 326 SUPERFAMILY SSF143422 4 124 3.14E-24 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D172_015655 f4292dc2bbfb427e227afa045bb7401f 326 Pfam PF01797 Transposase IS200 like 12 123 1.3E-15 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D172_015655 f4292dc2bbfb427e227afa045bb7401f 326 Gene3D G3DSA:3.30.70.1290 1 169 1.6E-40 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 SUPERFAMILY SSF141868 586 829 1.7E-72 T 14-10-2018 IPR035919 EAL domain superfamily D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 Gene3D G3DSA:3.20.20.450 585 827 1.1E-75 T 14-10-2018 IPR035919 EAL domain superfamily D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 288 402 7.6E-13 T 14-10-2018 IPR000014 PAS domain D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 Pfam PF13426 PAS domain 295 392 1.9E-9 T 14-10-2018 IPR000014 PAS domain D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 Gene3D G3DSA:3.30.70.270 409 584 3.8E-51 T 14-10-2018 D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 SUPERFAMILY SSF52172 4 91 3.56E-9 T 14-10-2018 IPR011006 CheY-like superfamily D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 SUPERFAMILY SSF55785 294 403 7.03E-16 T 14-10-2018 IPR035965 PAS domain superfamily D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 Gene3D G3DSA:3.40.50.2300 132 261 8.7E-9 T 14-10-2018 D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 SMART SM00052 580 821 1.2E-73 T 14-10-2018 IPR001633 EAL domain D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 402 566 1.4E-41 T 14-10-2018 IPR000160 GGDEF domain D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 Gene3D G3DSA:3.30.450.20 279 408 4.2E-17 T 14-10-2018 D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 SMART SM00448 5 120 0.0099 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 SUPERFAMILY SSF52172 155 257 1.57E-8 T 14-10-2018 IPR011006 CheY-like superfamily D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 Gene3D G3DSA:3.40.50.2300 2 131 5.4E-9 T 14-10-2018 D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 SUPERFAMILY SSF55073 411 570 3.45E-46 T 14-10-2018 IPR029787 Nucleotide cyclase D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 SMART SM00267 395 568 5.4E-53 T 14-10-2018 IPR000160 GGDEF domain D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 Pfam PF00072 Response regulator receiver domain 15 87 1.3E-5 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 Pfam PF00990 Diguanylate cyclase, GGDEF domain 406 563 1.2E-41 T 14-10-2018 IPR000160 GGDEF domain D172_001990 32060954dcb6b9be9968bb4cd93c3859 838 Pfam PF00563 EAL domain 587 816 1.6E-61 T 14-10-2018 IPR001633 EAL domain D172_007650 b344ec736a5436b0f421ef6e2ff3581c 382 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 13 123 2.6E-7 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal D172_007650 b344ec736a5436b0f421ef6e2ff3581c 382 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 230 361 7.0E-13 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain D172_007650 b344ec736a5436b0f421ef6e2ff3581c 382 SUPERFAMILY SSF52283 8 180 1.45E-34 T 14-10-2018 D172_007650 b344ec736a5436b0f421ef6e2ff3581c 382 Gene3D G3DSA:3.40.50.720 12 362 5.2E-41 T 14-10-2018 D172_007650 b344ec736a5436b0f421ef6e2ff3581c 382 SMART SM01003 7 133 8.7E-6 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal D172_007650 b344ec736a5436b0f421ef6e2ff3581c 382 SMART SM01002 152 309 2.4E-4 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain D172_007650 b344ec736a5436b0f421ef6e2ff3581c 382 SUPERFAMILY SSF51735 144 315 4.8E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_007650 b344ec736a5436b0f421ef6e2ff3581c 382 Gene3D G3DSA:3.40.50.720 137 317 5.2E-41 T 14-10-2018 D172_000780 07be8e7b2e2e17db6adedb77312d40c1 312 SUPERFAMILY SSF54782 223 311 4.97E-30 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D172_000780 07be8e7b2e2e17db6adedb77312d40c1 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 8 299 8.5E-115 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D172_000780 07be8e7b2e2e17db6adedb77312d40c1 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 7 299 39.881 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D172_000780 07be8e7b2e2e17db6adedb77312d40c1 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 8 214 2.1E-80 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D172_000780 07be8e7b2e2e17db6adedb77312d40c1 312 PRINTS PR00151 Porphobilinogen deaminase signature 47 67 1.3E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D172_000780 07be8e7b2e2e17db6adedb77312d40c1 312 PRINTS PR00151 Porphobilinogen deaminase signature 145 162 1.3E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D172_000780 07be8e7b2e2e17db6adedb77312d40c1 312 PRINTS PR00151 Porphobilinogen deaminase signature 126 143 1.3E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D172_000780 07be8e7b2e2e17db6adedb77312d40c1 312 PRINTS PR00151 Porphobilinogen deaminase signature 232 249 1.3E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D172_000780 07be8e7b2e2e17db6adedb77312d40c1 312 PRINTS PR00151 Porphobilinogen deaminase signature 78 97 1.3E-49 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D172_000780 07be8e7b2e2e17db6adedb77312d40c1 312 Gene3D G3DSA:3.40.190.10 8 212 1.9E-84 T 14-10-2018 D172_000780 07be8e7b2e2e17db6adedb77312d40c1 312 Gene3D G3DSA:3.40.190.10 105 204 1.9E-84 T 14-10-2018 D172_000780 07be8e7b2e2e17db6adedb77312d40c1 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 233 249 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D172_000780 07be8e7b2e2e17db6adedb77312d40c1 312 Gene3D G3DSA:3.30.160.40 223 308 1.7E-31 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D172_000780 07be8e7b2e2e17db6adedb77312d40c1 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 297 3.5E-22 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D172_000780 07be8e7b2e2e17db6adedb77312d40c1 312 PIRSF PIRSF001438 1 312 5.2E-126 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D172_000780 07be8e7b2e2e17db6adedb77312d40c1 312 SUPERFAMILY SSF53850 7 220 1.17E-84 T 14-10-2018 D172_017220 98075d18d29567ebeb2bc8b875b73d34 573 Gene3D G3DSA:3.40.50.150 305 545 2.7E-51 T 14-10-2018 D172_017220 98075d18d29567ebeb2bc8b875b73d34 573 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 254 544 22.344 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 D172_017220 98075d18d29567ebeb2bc8b875b73d34 573 Pfam PF01564 Spermine/spermidine synthase domain 309 504 7.4E-29 T 14-10-2018 D172_017220 98075d18d29567ebeb2bc8b875b73d34 573 SUPERFAMILY SSF53335 245 543 6.38E-59 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_012250 596ca4f6305961f68a58386749203f77 70 ProSitePatterns PS00018 EF-hand calcium-binding domain. 55 67 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_012250 596ca4f6305961f68a58386749203f77 70 Gene3D G3DSA:1.10.238.10 11 70 3.1E-10 T 14-10-2018 D172_012250 596ca4f6305961f68a58386749203f77 70 Pfam PF13202 EF hand 24 40 0.046 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_012250 596ca4f6305961f68a58386749203f77 70 Pfam PF13202 EF hand 50 68 9.3E-5 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_012250 596ca4f6305961f68a58386749203f77 70 SUPERFAMILY SSF47473 4 69 2.58E-9 T 14-10-2018 IPR011992 EF-hand domain pair D172_018505 5562af4c07a4669440d8c8ee27ff4965 535 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 256 270 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 D172_018505 5562af4c07a4669440d8c8ee27ff4965 535 Pfam PF05199 GMC oxidoreductase 390 525 8.7E-43 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 D172_018505 5562af4c07a4669440d8c8ee27ff4965 535 SUPERFAMILY SSF51905 2 533 6.96E-87 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_018505 5562af4c07a4669440d8c8ee27ff4965 535 Pfam PF00732 GMC oxidoreductase 6 297 1.7E-86 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 D172_018505 5562af4c07a4669440d8c8ee27ff4965 535 Gene3D G3DSA:3.30.560.10 45 470 6.8E-182 T 14-10-2018 D172_018505 5562af4c07a4669440d8c8ee27ff4965 535 Gene3D G3DSA:3.50.50.60 6 530 6.8E-182 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_018505 5562af4c07a4669440d8c8ee27ff4965 535 SUPERFAMILY SSF54373 292 475 4.51E-48 T 14-10-2018 D172_018505 5562af4c07a4669440d8c8ee27ff4965 535 PIRSF PIRSF000137 1 535 2.3E-152 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 D172_001140 4dc8b5ae8188b0d8ecac52efc27b900e 152 SMART SM00100 21 137 4.5E-4 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain D172_001140 4dc8b5ae8188b0d8ecac52efc27b900e 152 Pfam PF00027 Cyclic nucleotide-binding domain 45 121 3.5E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain D172_001140 4dc8b5ae8188b0d8ecac52efc27b900e 152 SUPERFAMILY SSF51206 5 121 4.71E-22 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like D172_001140 4dc8b5ae8188b0d8ecac52efc27b900e 152 Gene3D G3DSA:2.60.120.10 1 150 6.8E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_004975 fb86ac82dbdc1005a2eec677245d838b 527 Gene3D G3DSA:2.80.10.50 80 124 3.6E-12 T 14-10-2018 D172_004975 fb86ac82dbdc1005a2eec677245d838b 527 Gene3D G3DSA:2.80.10.50 125 175 2.2E-8 T 14-10-2018 D172_004975 fb86ac82dbdc1005a2eec677245d838b 527 SUPERFAMILY SSF51126 189 515 7.95E-52 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor D172_004975 fb86ac82dbdc1005a2eec677245d838b 527 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 122 177 1.0E-7 T 14-10-2018 IPR000772 Ricin B, lectin domain D172_004975 fb86ac82dbdc1005a2eec677245d838b 527 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 37 115 2.5E-17 T 14-10-2018 IPR000772 Ricin B, lectin domain D172_004975 fb86ac82dbdc1005a2eec677245d838b 527 SUPERFAMILY SSF50370 36 173 5.43E-32 T 14-10-2018 IPR035992 Ricin B-like lectins D172_004975 fb86ac82dbdc1005a2eec677245d838b 527 Gene3D G3DSA:2.160.20.10 191 505 4.5E-67 T 14-10-2018 IPR012334 Pectin lyase fold D172_004975 fb86ac82dbdc1005a2eec677245d838b 527 Gene3D G3DSA:2.80.10.50 23 79 3.9E-9 T 14-10-2018 D172_004975 fb86ac82dbdc1005a2eec677245d838b 527 SMART SM00656 263 469 3.5E-12 T 14-10-2018 IPR002022 Pectate lyase D172_004975 fb86ac82dbdc1005a2eec677245d838b 527 SMART SM00458 40 173 9.5E-11 T 14-10-2018 IPR000772 Ricin B, lectin domain D172_004975 fb86ac82dbdc1005a2eec677245d838b 527 Pfam PF00544 Pectate lyase 279 463 8.7E-17 T 14-10-2018 IPR002022 Pectate lyase D172_000670 409cc3bb9a12882f2c75a30116c6b706 761 SUPERFAMILY SSF56235 46 756 4.63E-172 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_000670 409cc3bb9a12882f2c75a30116c6b706 761 Gene3D G3DSA:2.30.120.10 326 378 1.1E-96 T 14-10-2018 D172_000670 409cc3bb9a12882f2c75a30116c6b706 761 Gene3D G3DSA:3.60.20.10 250 741 1.1E-96 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_000670 409cc3bb9a12882f2c75a30116c6b706 761 PIRSF PIRSF001227 4 752 1.3E-128 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 D172_000670 409cc3bb9a12882f2c75a30116c6b706 761 Pfam PF01804 Penicillin amidase 46 747 2.4E-121 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 D172_000670 409cc3bb9a12882f2c75a30116c6b706 761 Gene3D G3DSA:1.10.439.10 18 178 4.6E-41 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 D172_000670 409cc3bb9a12882f2c75a30116c6b706 761 Gene3D G3DSA:1.10.1400.10 525 658 1.1E-96 T 14-10-2018 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 Gene3D G3DSA:3.50.50.60 9 281 2.7E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 PIRSF PIRSF037149 1 831 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 SUPERFAMILY SSF55124 498 637 4.42E-26 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 Gene3D G3DSA:3.50.50.60 109 244 2.7E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 628 753 8.5E-20 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 6.7E-14 T 14-10-2018 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 6.7E-14 T 14-10-2018 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 6.7E-14 T 14-10-2018 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 6.7E-14 T 14-10-2018 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 Gene3D G3DSA:3.30.413.10 627 786 1.3E-35 T 14-10-2018 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 PRINTS PR00397 Sirohaem Fe-binding site signature 675 693 4.7E-7 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 PRINTS PR00397 Sirohaem Fe-binding site signature 632 650 4.7E-7 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 SUPERFAMILY SSF51905 2 186 1.23E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 SUPERFAMILY SSF51905 144 307 2.27E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 Pfam PF04324 BFD-like [2Fe-2S] binding domain 419 466 3.0E-8 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 675 691 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 556 618 1.1E-9 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 SUPERFAMILY SSF56014 629 804 3.79E-52 T 14-10-2018 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.6E-8 T 14-10-2018 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 8.6E-8 T 14-10-2018 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 8.6E-8 T 14-10-2018 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 8.6E-8 T 14-10-2018 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 Gene3D G3DSA:1.10.10.1100 419 473 4.9E-10 T 14-10-2018 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 284 1.4E-45 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D172_007255 dd1c4b2dc40c4e7c3d6647ac8e87fcd4 857 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 7 796 0.0 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 D172_002380 5bf218a8359a7bfc7bdd204ce5f9d156 543 Gene3D G3DSA:1.10.3720.10 287 542 4.3E-29 T 14-10-2018 IPR035906 MetI-like superfamily D172_002380 5bf218a8359a7bfc7bdd204ce5f9d156 543 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 369 542 3.7E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D172_002380 5bf218a8359a7bfc7bdd204ce5f9d156 543 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 71 264 1.1E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D172_002380 5bf218a8359a7bfc7bdd204ce5f9d156 543 SUPERFAMILY SSF161098 285 537 1.2E-35 T 14-10-2018 IPR035906 MetI-like superfamily D172_002380 5bf218a8359a7bfc7bdd204ce5f9d156 543 Gene3D G3DSA:1.10.3720.10 11 271 1.0E-45 T 14-10-2018 IPR035906 MetI-like superfamily D172_002380 5bf218a8359a7bfc7bdd204ce5f9d156 543 SUPERFAMILY SSF161098 10 260 3.01E-37 T 14-10-2018 IPR035906 MetI-like superfamily D172_020040 10382f0551d04050fdc019a34f2a4d6b 247 Pfam PF08021 Siderophore-interacting FAD-binding domain 10 108 5.5E-23 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting D172_020040 10382f0551d04050fdc019a34f2a4d6b 247 Gene3D G3DSA:3.40.50.80 111 247 3.2E-26 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D172_020040 10382f0551d04050fdc019a34f2a4d6b 247 Pfam PF04954 Siderophore-interacting protein 118 230 9.9E-23 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain D172_020040 10382f0551d04050fdc019a34f2a4d6b 247 Gene3D G3DSA:2.40.30.10 1 110 3.0E-29 T 14-10-2018 D172_020040 10382f0551d04050fdc019a34f2a4d6b 247 SUPERFAMILY SSF63380 4 108 1.08E-11 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D172_012895 9aa63e601a6b289bc955add991ac19f6 264 Gene3D G3DSA:3.30.70.660 105 242 5.5E-50 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 D172_012895 9aa63e601a6b289bc955add991ac19f6 264 SUPERFAMILY SSF55120 1 256 1.11E-89 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_012895 9aa63e601a6b289bc955add991ac19f6 264 Pfam PF01416 tRNA pseudouridine synthase 142 244 7.5E-32 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_012895 9aa63e601a6b289bc955add991ac19f6 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 8.4E-8 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_012895 9aa63e601a6b289bc955add991ac19f6 264 Gene3D G3DSA:3.30.70.580 1 104 4.4E-38 T 14-10-2018 D172_012895 9aa63e601a6b289bc955add991ac19f6 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 8.0E-71 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_012895 9aa63e601a6b289bc955add991ac19f6 264 PIRSF PIRSF001430 1 255 4.1E-78 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_012895 9aa63e601a6b289bc955add991ac19f6 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.859 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_016460 46c9f79627e5f5bae444076076602ef5 159 Gene3D G3DSA:3.10.50.30 77 158 1.4E-33 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 D172_016460 46c9f79627e5f5bae444076076602ef5 159 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.1E-24 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 D172_016460 46c9f79627e5f5bae444076076602ef5 159 SUPERFAMILY SSF46557 3 78 5.89E-26 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 D172_016460 46c9f79627e5f5bae444076076602ef5 159 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 27.028 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 D172_016460 46c9f79627e5f5bae444076076602ef5 159 PIRSF PIRSF006092 1 157 2.1E-44 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 D172_016460 46c9f79627e5f5bae444076076602ef5 159 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 D172_016460 46c9f79627e5f5bae444076076602ef5 159 SUPERFAMILY SSF54534 80 156 1.44E-21 T 14-10-2018 D172_016460 46c9f79627e5f5bae444076076602ef5 159 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 52.411 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 D172_016460 46c9f79627e5f5bae444076076602ef5 159 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 D172_016460 46c9f79627e5f5bae444076076602ef5 159 Gene3D G3DSA:1.10.287.180 1 76 1.5E-29 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 D172_016460 46c9f79627e5f5bae444076076602ef5 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 4.1E-24 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 D172_016460 46c9f79627e5f5bae444076076602ef5 159 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 7.4E-74 T 14-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 D172_001705 604e3fc685e5f2c815c8487d81cf226b 446 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D172_001705 604e3fc685e5f2c815c8487d81cf226b 446 SUPERFAMILY SSF56059 83 346 6.01E-72 T 14-10-2018 D172_001705 604e3fc685e5f2c815c8487d81cf226b 446 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.2E-42 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D172_001705 604e3fc685e5f2c815c8487d81cf226b 446 SUPERFAMILY SSF51246 331 444 1.78E-42 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 D172_001705 604e3fc685e5f2c815c8487d81cf226b 446 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 6.5E-238 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 D172_001705 604e3fc685e5f2c815c8487d81cf226b 446 SMART SM00878 336 441 6.3E-64 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D172_001705 604e3fc685e5f2c815c8487d81cf226b 446 Gene3D G3DSA:3.40.50.20 1 85 1.6E-33 T 14-10-2018 D172_001705 604e3fc685e5f2c815c8487d81cf226b 446 SUPERFAMILY SSF52440 1 113 1.58E-44 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily D172_001705 604e3fc685e5f2c815c8487d81cf226b 446 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D172_001705 604e3fc685e5f2c815c8487d81cf226b 446 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.8E-37 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D172_001705 604e3fc685e5f2c815c8487d81cf226b 446 Gene3D G3DSA:3.30.1490.20 131 203 1.9E-154 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D172_001705 604e3fc685e5f2c815c8487d81cf226b 446 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 8.8E-86 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D172_001705 604e3fc685e5f2c815c8487d81cf226b 446 Gene3D G3DSA:3.30.470.20 87 433 1.9E-154 T 14-10-2018 D172_014435 6f45b1dc0931b8d27e07b7dceb956bf7 282 Gene3D G3DSA:3.30.1300.10 181 282 7.6E-30 T 14-10-2018 D172_014435 6f45b1dc0931b8d27e07b7dceb956bf7 282 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 66 4.3E-9 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D172_014435 6f45b1dc0931b8d27e07b7dceb956bf7 282 SUPERFAMILY SSF52374 1 280 2.56E-105 T 14-10-2018 D172_014435 6f45b1dc0931b8d27e07b7dceb956bf7 282 Gene3D G3DSA:3.40.50.620 1 179 1.4E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_014435 6f45b1dc0931b8d27e07b7dceb956bf7 282 Pfam PF02569 Pantoate-beta-alanine ligase 4 278 6.1E-101 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 D172_014435 6f45b1dc0931b8d27e07b7dceb956bf7 282 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.499 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 D172_014435 6f45b1dc0931b8d27e07b7dceb956bf7 282 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 3.1E-101 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 D172_017310 67e2b621fb7c31fa0c27a82d7d78ad14 238 Pfam PF02146 Sir2 family 8 192 2.0E-21 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 D172_017310 67e2b621fb7c31fa0c27a82d7d78ad14 238 Gene3D G3DSA:3.30.1600.10 17 163 5.8E-38 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily D172_017310 67e2b621fb7c31fa0c27a82d7d78ad14 238 SUPERFAMILY SSF52467 4 221 2.04E-45 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily D172_017310 67e2b621fb7c31fa0c27a82d7d78ad14 238 Gene3D G3DSA:3.40.50.1220 5 219 5.8E-38 T 14-10-2018 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 SUPERFAMILY SSF55008 11 77 3.01E-16 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 650 2.3E-27 T 14-10-2018 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 578 588 2.3E-27 T 14-10-2018 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 654 666 2.3E-27 T 14-10-2018 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 280 294 2.3E-27 T 14-10-2018 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 432 446 2.3E-27 T 14-10-2018 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 556 567 2.3E-27 T 14-10-2018 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 Gene3D G3DSA:3.30.70.100 11 71 1.5E-15 T 14-10-2018 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 SUPERFAMILY SSF56784 432 737 4.67E-56 T 14-10-2018 IPR036412 HAD-like superfamily D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 434 440 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 145 741 2.2E-184 T 14-10-2018 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 Pfam PF00702 haloacid dehalogenase-like hydrolase 428 645 9.3E-41 T 14-10-2018 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 SUPERFAMILY SSF81665 113 702 8.11E-8 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 SUPERFAMILY SSF81653 232 330 8.37E-29 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 Gene3D G3DSA:2.70.150.20 223 335 5.8E-40 T 14-10-2018 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 202 708 2.0E-84 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 Gene3D G3DSA:3.40.1110.10 443 563 1.5E-93 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 PRINTS PR00943 Copper-transporting ATPase signature 50 70 2.4E-8 T 14-10-2018 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 PRINTS PR00943 Copper-transporting ATPase signature 148 167 2.4E-8 T 14-10-2018 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 PRINTS PR00943 Copper-transporting ATPase signature 608 625 2.4E-8 T 14-10-2018 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 PRINTS PR00943 Copper-transporting ATPase signature 353 367 2.4E-8 T 14-10-2018 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 PRINTS PR00943 Copper-transporting ATPase signature 220 238 2.4E-8 T 14-10-2018 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 163 740 8.2E-187 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 Pfam PF00403 Heavy-metal-associated domain 12 68 9.1E-14 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 Gene3D G3DSA:3.40.50.1000 413 683 1.5E-93 T 14-10-2018 IPR023214 HAD superfamily D172_012340 9fb94652c4d1da78bb15d91d98ab7314 748 Pfam PF00122 E1-E2 ATPase 231 411 1.5E-53 T 14-10-2018 D172_011955 48a26ced629af683cbe77f672d5bea7d 203 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 6 98 24.594 T 14-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 D172_011955 48a26ced629af683cbe77f672d5bea7d 203 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 10 172 7.3E-44 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 D172_011955 48a26ced629af683cbe77f672d5bea7d 203 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 190 8.0E-25 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain D172_011955 48a26ced629af683cbe77f672d5bea7d 203 Gene3D G3DSA:2.40.240.10 5 98 3.8E-32 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D172_011955 48a26ced629af683cbe77f672d5bea7d 203 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 6 189 28.854 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 D172_011955 48a26ced629af683cbe77f672d5bea7d 203 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 8 98 3.0E-39 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 D172_011955 48a26ced629af683cbe77f672d5bea7d 203 Pfam PF01386 Ribosomal L25p family 9 95 2.6E-25 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 D172_011955 48a26ced629af683cbe77f672d5bea7d 203 Gene3D G3DSA:2.170.120.20 101 196 2.7E-25 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal D172_011955 48a26ced629af683cbe77f672d5bea7d 203 SUPERFAMILY SSF50715 6 194 3.49E-54 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D172_004005 a8604bac650d9d9004e93898718ae16c 148 Gene3D G3DSA:3.40.50.10110 1 146 9.3E-43 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily D172_004005 a8604bac650d9d9004e93898718ae16c 148 SUPERFAMILY SSF102400 5 146 6.8E-38 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily D172_004005 a8604bac650d9d9004e93898718ae16c 148 Pfam PF04364 DNA polymerase III chi subunit, HolC 5 141 1.1E-33 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 D172_020800 fadf94c81efb739ed9a74256187b399d 989 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 139 1.4E-13 T 14-10-2018 D172_020800 fadf94c81efb739ed9a74256187b399d 989 SUPERFAMILY SSF55874 860 967 3.54E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_020800 fadf94c81efb739ed9a74256187b399d 989 Gene3D G3DSA:3.30.565.10 3 175 2.2E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_020800 fadf94c81efb739ed9a74256187b399d 989 SMART SM00387 876 987 1.3E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_020800 fadf94c81efb739ed9a74256187b399d 989 Gene3D G3DSA:1.10.287.130 792 827 6.5E-17 T 14-10-2018 D172_020800 fadf94c81efb739ed9a74256187b399d 989 SUPERFAMILY SSF55874 12 143 1.13E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_020800 fadf94c81efb739ed9a74256187b399d 989 Gene3D G3DSA:3.30.565.10 828 968 6.5E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_020800 fadf94c81efb739ed9a74256187b399d 989 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 880 969 5.9E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_019765 1caace9b68fc8cc1386af627e1669a1f 244 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 240 30.286 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 D172_019765 1caace9b68fc8cc1386af627e1669a1f 244 Pfam PF00977 Histidine biosynthesis protein 2 232 3.1E-65 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 D172_019765 1caace9b68fc8cc1386af627e1669a1f 244 Gene3D G3DSA:3.20.20.70 1 244 3.6E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_019765 1caace9b68fc8cc1386af627e1669a1f 244 SUPERFAMILY SSF51366 2 241 1.68E-58 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D172_001820 b9c25ff67e1ee3b4b44403ea0c372386 255 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 201 2.8E-41 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal D172_001820 b9c25ff67e1ee3b4b44403ea0c372386 255 Gene3D G3DSA:3.40.225.10 8 255 4.1E-67 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily D172_001820 b9c25ff67e1ee3b4b44403ea0c372386 255 SUPERFAMILY SSF53639 16 223 1.61E-55 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily D172_001820 b9c25ff67e1ee3b4b44403ea0c372386 255 SMART SM01007 22 201 4.0E-52 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal D172_017950 63b5b28bd42875608ac2535d6d9fc95a 217 Gene3D G3DSA:1.10.357.10 68 209 1.9E-44 T 14-10-2018 D172_017950 63b5b28bd42875608ac2535d6d9fc95a 217 Gene3D G3DSA:1.10.10.60 2 67 1.0E-18 T 14-10-2018 D172_017950 63b5b28bd42875608ac2535d6d9fc95a 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 8.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_017950 63b5b28bd42875608ac2535d6d9fc95a 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 8.4E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_017950 63b5b28bd42875608ac2535d6d9fc95a 217 Pfam PF08362 YcdC-like protein, C-terminal region 69 209 6.4E-43 T 14-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 D172_017950 63b5b28bd42875608ac2535d6d9fc95a 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.3E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_017950 63b5b28bd42875608ac2535d6d9fc95a 217 SUPERFAMILY SSF46689 9 87 1.35E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_017950 63b5b28bd42875608ac2535d6d9fc95a 217 SUPERFAMILY SSF48498 85 209 1.48E-35 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D172_001440 38bfbeae8b5fdfb284796d3dcdb9a59d 270 SUPERFAMILY SSF56276 47 178 1.41E-21 T 14-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 D172_001440 38bfbeae8b5fdfb284796d3dcdb9a59d 270 PIRSF PIRSF001356 2 268 6.1E-145 T 14-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 D172_001440 38bfbeae8b5fdfb284796d3dcdb9a59d 270 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 270 167.554 T 14-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 D172_001440 38bfbeae8b5fdfb284796d3dcdb9a59d 270 Pfam PF02675 S-adenosylmethionine decarboxylase 42 174 1.6E-27 T 14-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 D172_001440 38bfbeae8b5fdfb284796d3dcdb9a59d 270 Gene3D G3DSA:3.60.90.10 99 190 2.3E-5 T 14-10-2018 D172_001440 38bfbeae8b5fdfb284796d3dcdb9a59d 270 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 7 266 1.6E-147 T 14-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 SMART SM00896 701 794 6.0E-43 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 SUPERFAMILY SSF50249 35 196 1.35E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_006450 e7a147a7d93acf65e701bc26742a1849 795 SUPERFAMILY SSF54991 696 794 4.71E-29 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.3E-24 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 SUPERFAMILY SSF46955 404 475 3.39E-20 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily D172_006450 e7a147a7d93acf65e701bc26742a1849 795 SMART SM00874 403 471 1.2E-28 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 Gene3D G3DSA:3.30.930.10 485 691 1.3E-57 T 14-10-2018 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.9E-26 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 Gene3D G3DSA:3.30.70.380 702 795 1.7E-28 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 1.7E-19 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 SUPERFAMILY SSF56037 196 394 5.23E-72 T 14-10-2018 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 SUPERFAMILY SSF55681 467 689 2.93E-49 T 14-10-2018 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 Gene3D G3DSA:3.30.56.10 7 179 6.7E-72 T 14-10-2018 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.157 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 Gene3D G3DSA:3.30.56.10 401 475 3.8E-26 T 14-10-2018 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 Gene3D G3DSA:2.40.50.140 39 154 6.7E-72 T 14-10-2018 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 SMART SM00873 212 385 1.2E-92 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 1.9E-270 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 Gene3D G3DSA:3.50.40.10 197 395 8.7E-77 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 D172_006450 e7a147a7d93acf65e701bc26742a1849 795 Pfam PF03483 B3/4 domain 212 385 1.4E-67 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 D172_011940 89284238ea9f2d010f13e45649b60c88 195 SUPERFAMILY SSF89392 27 194 6.67E-35 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX D172_011940 89284238ea9f2d010f13e45649b60c88 195 Pfam PF03550 Outer membrane lipoprotein LolB 41 192 1.2E-35 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 D172_011940 89284238ea9f2d010f13e45649b60c88 195 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 5 193 2.8E-31 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 D172_011940 89284238ea9f2d010f13e45649b60c88 195 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 1 194 20.777 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 D172_011940 89284238ea9f2d010f13e45649b60c88 195 Gene3D G3DSA:2.50.20.10 24 194 3.9E-43 T 14-10-2018 D172_005045 603eeea2d25523316853458f4cb453ed 876 SMART SM01018 307 390 8.3E-44 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_005045 603eeea2d25523316853458f4cb453ed 876 Pfam PF02607 B12 binding domain 309 382 4.7E-24 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_005045 603eeea2d25523316853458f4cb453ed 876 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 589 856 1.4E-119 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_005045 603eeea2d25523316853458f4cb453ed 876 Gene3D G3DSA:3.10.196.10 558 872 1.0E-143 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_005045 603eeea2d25523316853458f4cb453ed 876 Gene3D G3DSA:1.10.1240.10 299 387 7.4E-40 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_005045 603eeea2d25523316853458f4cb453ed 876 Gene3D G3DSA:1.10.288.10 587 741 1.0E-143 T 14-10-2018 D172_005045 603eeea2d25523316853458f4cb453ed 876 Pfam PF00809 Pterin binding enzyme 12 250 7.8E-60 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_005045 603eeea2d25523316853458f4cb453ed 876 SUPERFAMILY SSF52242 393 543 9.29E-45 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 D172_005045 603eeea2d25523316853458f4cb453ed 876 SUPERFAMILY SSF47644 302 389 7.45E-28 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_005045 603eeea2d25523316853458f4cb453ed 876 PIRSF PIRSF000381 1 844 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_005045 603eeea2d25523316853458f4cb453ed 876 TIGRFAM TIGR02082 metH: methionine synthase 4 841 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_005045 603eeea2d25523316853458f4cb453ed 876 Gene3D G3DSA:3.20.20.20 2 296 2.1E-128 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_005045 603eeea2d25523316853458f4cb453ed 876 SUPERFAMILY SSF56507 552 876 5.89E-128 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_005045 603eeea2d25523316853458f4cb453ed 876 Gene3D G3DSA:3.40.50.280 394 545 3.7E-57 T 14-10-2018 D172_005045 603eeea2d25523316853458f4cb453ed 876 SUPERFAMILY SSF51717 8 281 1.31E-92 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_005045 603eeea2d25523316853458f4cb453ed 876 Pfam PF02310 B12 binding domain 398 493 1.3E-20 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 D172_013335 53d9e5b3c44b03e9c52e7f3a8f958f03 255 PIRSF PIRSF002884 20 255 1.5E-83 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 D172_013335 53d9e5b3c44b03e9c52e7f3a8f958f03 255 Gene3D G3DSA:1.10.287.500 62 196 8.8E-46 T 14-10-2018 D172_013335 53d9e5b3c44b03e9c52e7f3a8f958f03 255 Pfam PF04344 Chemotaxis phosphatase, CheZ 43 255 1.3E-76 T 14-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 D172_013335 53d9e5b3c44b03e9c52e7f3a8f958f03 255 SUPERFAMILY SSF75708 35 254 8.63E-64 T 14-10-2018 D172_018280 777c1ac71f9484e131e4359505d3266a 334 SMART SM00354 7 77 9.8E-23 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_018280 777c1ac71f9484e131e4359505d3266a 334 Gene3D G3DSA:3.40.50.2300 160 333 2.8E-25 T 14-10-2018 D172_018280 777c1ac71f9484e131e4359505d3266a 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 68 271 1.8E-18 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain D172_018280 777c1ac71f9484e131e4359505d3266a 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 14-10-2018 D172_018280 777c1ac71f9484e131e4359505d3266a 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 3.1E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_018280 777c1ac71f9484e131e4359505d3266a 334 Gene3D G3DSA:3.40.50.2300 66 154 5.4E-13 T 14-10-2018 D172_018280 777c1ac71f9484e131e4359505d3266a 334 Gene3D G3DSA:1.10.260.40 5 65 5.2E-19 T 14-10-2018 D172_018280 777c1ac71f9484e131e4359505d3266a 334 SUPERFAMILY SSF53822 64 324 2.55E-37 T 14-10-2018 IPR028082 Periplasmic binding protein-like I D172_018280 777c1ac71f9484e131e4359505d3266a 334 SUPERFAMILY SSF47413 6 66 1.13E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D172_008300 59b3a5f6f4386b78e58cf5542d7a4979 253 Gene3D G3DSA:3.90.550.10 1 248 6.2E-85 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_008300 59b3a5f6f4386b78e58cf5542d7a4979 253 SUPERFAMILY SSF53448 3 244 1.97E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_008300 59b3a5f6f4386b78e58cf5542d7a4979 253 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 249 42.253 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 D172_008300 59b3a5f6f4386b78e58cf5542d7a4979 253 Pfam PF02348 Cytidylyltransferase 4 222 3.3E-58 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 D172_008300 59b3a5f6f4386b78e58cf5542d7a4979 253 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 2 241 8.4E-96 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 D172_001960 ad7e6166c9f58bbca00726b46d1f6c3b 275 Pfam PF00005 ABC transporter 44 200 1.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_001960 ad7e6166c9f58bbca00726b46d1f6c3b 275 SUPERFAMILY SSF52540 25 261 3.63E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_001960 ad7e6166c9f58bbca00726b46d1f6c3b 275 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 29 275 4.3E-129 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 D172_001960 ad7e6166c9f58bbca00726b46d1f6c3b 275 Gene3D G3DSA:3.40.50.300 24 272 1.9E-66 T 14-10-2018 D172_001960 ad7e6166c9f58bbca00726b46d1f6c3b 275 SMART SM00382 53 262 1.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_001960 ad7e6166c9f58bbca00726b46d1f6c3b 275 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_013560 6a4e6b572b66f2d7c55d5a82f13484e9 235 SMART SM00858 113 175 3.3E-9 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 D172_013560 6a4e6b572b66f2d7c55d5a82f13484e9 235 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 101 234 1.9E-37 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal D172_013560 6a4e6b572b66f2d7c55d5a82f13484e9 235 Pfam PF13144 Chaperone for flagella basal body P-ring formation 39 233 1.6E-47 T 14-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal D172_013560 6a4e6b572b66f2d7c55d5a82f13484e9 235 Gene3D G3DSA:2.30.30.760 175 235 3.6E-12 T 14-10-2018 D172_009765 62d1e88a2f8e0818735972cd6dae7711 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 313 1.1E-63 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_009765 62d1e88a2f8e0818735972cd6dae7711 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 1.2E-36 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_009765 62d1e88a2f8e0818735972cd6dae7711 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 1.2E-36 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_009765 62d1e88a2f8e0818735972cd6dae7711 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 1.2E-36 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_009765 62d1e88a2f8e0818735972cd6dae7711 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 1.2E-36 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_009765 62d1e88a2f8e0818735972cd6dae7711 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 1.2E-36 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_009765 62d1e88a2f8e0818735972cd6dae7711 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 325 2.1E-126 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_009765 62d1e88a2f8e0818735972cd6dae7711 334 PIRSF PIRSF000149 1 333 4.7E-135 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_009765 62d1e88a2f8e0818735972cd6dae7711 334 Gene3D G3DSA:3.40.50.720 4 325 4.4E-144 T 14-10-2018 D172_009765 62d1e88a2f8e0818735972cd6dae7711 334 SUPERFAMILY SSF51735 2 175 4.43E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_009765 62d1e88a2f8e0818735972cd6dae7711 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 104 2.2E-36 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_009765 62d1e88a2f8e0818735972cd6dae7711 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_009765 62d1e88a2f8e0818735972cd6dae7711 334 Gene3D G3DSA:3.30.360.10 152 315 4.4E-144 T 14-10-2018 D172_009765 62d1e88a2f8e0818735972cd6dae7711 334 SMART SM00846 2 153 5.8E-87 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_009765 62d1e88a2f8e0818735972cd6dae7711 334 SUPERFAMILY SSF55347 153 314 4.05E-70 T 14-10-2018 D172_009110 f0d8fb7843c4480fc408d67e0a93987f 324 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 17 321 9.3E-118 T 14-10-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 D172_009110 f0d8fb7843c4480fc408d67e0a93987f 324 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 19 322 3.9E-100 T 14-10-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent D172_009110 f0d8fb7843c4480fc408d67e0a93987f 324 SUPERFAMILY SSF53335 33 316 2.52E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_009110 f0d8fb7843c4480fc408d67e0a93987f 324 PIRSF PIRSF018005 1 324 7.7E-100 T 14-10-2018 IPR017804 Methyltransferase EgtD-like GO:0008168 D172_009110 f0d8fb7843c4480fc408d67e0a93987f 324 Gene3D G3DSA:3.40.50.150 44 221 9.9E-41 T 14-10-2018 D172_016885 d5654ae10e9ab1873e4dfc515a7df4f3 228 Gene3D G3DSA:3.40.50.1000 4 211 4.0E-70 T 14-10-2018 IPR023214 HAD superfamily D172_016885 d5654ae10e9ab1873e4dfc515a7df4f3 228 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 219 8.5E-76 T 14-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 D172_016885 d5654ae10e9ab1873e4dfc515a7df4f3 228 SUPERFAMILY SSF56784 1 221 1.62E-53 T 14-10-2018 IPR036412 HAD-like superfamily D172_016885 d5654ae10e9ab1873e4dfc515a7df4f3 228 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 1 222 38.523 T 14-10-2018 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 D172_016885 d5654ae10e9ab1873e4dfc515a7df4f3 228 Gene3D G3DSA:1.10.720.60 16 99 4.0E-70 T 14-10-2018 D172_016885 d5654ae10e9ab1873e4dfc515a7df4f3 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 196 1.4E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_011680 70ae28932354f6a77ffc3067ce88b3f8 88 SUPERFAMILY SSF57716 38 69 5.99E-7 T 14-10-2018 D172_011680 70ae28932354f6a77ffc3067ce88b3f8 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 37 68 3.9E-12 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 D172_011680 70ae28932354f6a77ffc3067ce88b3f8 88 Gene3D G3DSA:1.20.120.910 1 70 3.2E-20 T 14-10-2018 D172_011680 70ae28932354f6a77ffc3067ce88b3f8 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 SMART SM00487 24 220 1.8E-29 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 Pfam PF00271 Helicase conserved C-terminal domain 224 332 9.9E-20 T 14-10-2018 IPR001650 Helicase, C-terminal D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 Pfam PF16124 RecQ zinc-binding 345 406 6.9E-16 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 Gene3D G3DSA:3.40.50.300 211 342 1.4E-43 T 14-10-2018 D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 SMART SM00341 530 607 1.9E-18 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 603 1.2E-245 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 Pfam PF00570 HRDC domain 534 600 1.5E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 Gene3D G3DSA:1.10.150.80 524 607 3.2E-26 T 14-10-2018 D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 Gene3D G3DSA:1.10.10.10 343 523 1.1E-51 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 SMART SM00490 252 333 4.6E-29 T 14-10-2018 IPR001650 Helicase, C-terminal D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 18 466 7.0E-183 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 SUPERFAMILY SSF52540 210 456 3.9E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 Pfam PF00270 DEAD/DEAH box helicase 30 188 3.1E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 SMART SM00956 413 516 2.5E-48 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 SUPERFAMILY SSF47819 530 606 9.91E-27 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 SUPERFAMILY SSF52540 17 204 4.65E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 Gene3D G3DSA:3.40.50.300 8 210 7.9E-81 T 14-10-2018 D172_002855 2befa080b3e4a9fe383006a13a5e2611 607 Pfam PF09382 RQC domain 408 519 2.3E-36 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 D172_009315 46dd12855fa41847796e50ef82693986 351 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 154 171 - T 14-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 D172_009315 46dd12855fa41847796e50ef82693986 351 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 7 179 1.3E-66 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 D172_009315 46dd12855fa41847796e50ef82693986 351 PIRSF PIRSF000808 4 344 2.1E-111 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 D172_009315 46dd12855fa41847796e50ef82693986 351 SUPERFAMILY SSF54197 7 179 6.17E-66 T 14-10-2018 IPR036265 HIT-like superfamily D172_009315 46dd12855fa41847796e50ef82693986 351 SUPERFAMILY SSF54197 182 344 3.23E-48 T 14-10-2018 IPR036265 HIT-like superfamily D172_009315 46dd12855fa41847796e50ef82693986 351 Gene3D G3DSA:3.30.428.10 48 178 3.8E-53 T 14-10-2018 IPR036265 HIT-like superfamily D172_009315 46dd12855fa41847796e50ef82693986 351 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 6 350 1.7E-160 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 D172_009315 46dd12855fa41847796e50ef82693986 351 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 189 348 5.1E-57 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 D172_009315 46dd12855fa41847796e50ef82693986 351 Gene3D G3DSA:3.30.428.10 179 351 7.8E-63 T 14-10-2018 IPR036265 HIT-like superfamily D172_012115 a3e1f0f485b36ce42a06a0625ca09931 174 SUPERFAMILY SSF49785 25 168 7.48E-27 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_012115 a3e1f0f485b36ce42a06a0625ca09931 174 Pfam PF08547 Complex I intermediate-associated protein 30 (CIA30) 23 167 7.5E-42 T 14-10-2018 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 Reactome: R-HSA-6799198 D172_020495 78c7ccdeed145bb0da3117e5ace95edd 415 Pfam PF00149 Calcineurin-like phosphoesterase 1 227 1.3E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D172_020495 78c7ccdeed145bb0da3117e5ace95edd 415 Gene3D G3DSA:3.60.21.10 1 277 1.2E-76 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like D172_020495 78c7ccdeed145bb0da3117e5ace95edd 415 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 301 385 1.2E-7 T 14-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain D172_020495 78c7ccdeed145bb0da3117e5ace95edd 415 SUPERFAMILY SSF56300 1 342 1.02E-46 T 14-10-2018 D172_020495 78c7ccdeed145bb0da3117e5ace95edd 415 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 255 1.1E-56 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 D172_016435 06a46c6e873cb8850596ba5af2699e1f 1000 SUPERFAMILY SSF56634 43 335 3.14E-47 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_016435 06a46c6e873cb8850596ba5af2699e1f 1000 Gene3D G3DSA:1.20.1280.120 47 324 4.2E-31 T 14-10-2018 D172_016435 06a46c6e873cb8850596ba5af2699e1f 1000 Gene3D G3DSA:2.40.180.20 59 310 4.2E-31 T 14-10-2018 D172_016650 a281ad704e31abcc49ee53aa959b0449 518 SMART SM00382 212 355 6.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_016650 a281ad704e31abcc49ee53aa959b0449 518 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 278 293 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D172_016650 a281ad704e31abcc49ee53aa959b0449 518 SUPERFAMILY SSF46689 462 512 1.39E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_016650 a281ad704e31abcc49ee53aa959b0449 518 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 405 414 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site D172_016650 a281ad704e31abcc49ee53aa959b0449 518 Gene3D G3DSA:1.10.8.60 364 444 5.4E-20 T 14-10-2018 D172_016650 a281ad704e31abcc49ee53aa959b0449 518 SUPERFAMILY SSF52540 191 425 1.9E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_016650 a281ad704e31abcc49ee53aa959b0449 518 Gene3D G3DSA:3.40.50.300 178 363 3.3E-65 T 14-10-2018 D172_016650 a281ad704e31abcc49ee53aa959b0449 518 Pfam PF00158 Sigma-54 interaction domain 192 358 5.2E-69 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D172_016650 a281ad704e31abcc49ee53aa959b0449 518 SUPERFAMILY SSF55781 6 156 3.43E-11 T 14-10-2018 D172_016650 a281ad704e31abcc49ee53aa959b0449 518 Gene3D G3DSA:3.30.450.40 2 173 9.8E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_016650 a281ad704e31abcc49ee53aa959b0449 518 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 216 229 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D172_016650 a281ad704e31abcc49ee53aa959b0449 518 Gene3D G3DSA:1.10.10.60 457 517 4.4E-12 T 14-10-2018 D172_010160 6da0f6f948e62444fd640c123ea52ea3 394 Gene3D G3DSA:3.40.50.1100 8 203 4.7E-183 T 14-10-2018 D172_010160 6da0f6f948e62444fd640c123ea52ea3 394 SUPERFAMILY SSF53686 4 386 1.02E-143 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D172_010160 6da0f6f948e62444fd640c123ea52ea3 394 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 375 1.2E-50 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D172_010160 6da0f6f948e62444fd640c123ea52ea3 394 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 388 51.156 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D172_010160 6da0f6f948e62444fd640c123ea52ea3 394 PIRSF PIRSF001413 1 393 2.1E-166 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D172_010160 6da0f6f948e62444fd640c123ea52ea3 394 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 78 92 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D172_010160 6da0f6f948e62444fd640c123ea52ea3 394 Gene3D G3DSA:3.40.50.1100 52 381 4.7E-183 T 14-10-2018 D172_010160 6da0f6f948e62444fd640c123ea52ea3 394 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 5 386 1.7E-194 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D172_014770 80d20e2a20092edb66c57795f44d6673 690 SUPERFAMILY SSF52317 546 660 1.49E-15 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_014770 80d20e2a20092edb66c57795f44d6673 690 Gene3D G3DSA:2.40.180.10 5 438 1.3E-200 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 D172_014770 80d20e2a20092edb66c57795f44d6673 690 SMART SM01060 29 417 8.3E-269 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_014770 80d20e2a20092edb66c57795f44d6673 690 Gene3D G3DSA:1.20.1370.20 444 546 1.9E-31 T 14-10-2018 D172_014770 80d20e2a20092edb66c57795f44d6673 690 Gene3D G3DSA:3.40.50.880 547 690 2.0E-29 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_014770 80d20e2a20092edb66c57795f44d6673 690 PRINTS PR00067 Catalase signature 126 143 4.1E-66 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_014770 80d20e2a20092edb66c57795f44d6673 690 PRINTS PR00067 Catalase signature 314 341 4.1E-66 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_014770 80d20e2a20092edb66c57795f44d6673 690 PRINTS PR00067 Catalase signature 105 123 4.1E-66 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_014770 80d20e2a20092edb66c57795f44d6673 690 PRINTS PR00067 Catalase signature 346 372 4.1E-66 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_014770 80d20e2a20092edb66c57795f44d6673 690 PRINTS PR00067 Catalase signature 42 65 4.1E-66 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_014770 80d20e2a20092edb66c57795f44d6673 690 PRINTS PR00067 Catalase signature 145 163 4.1E-66 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_014770 80d20e2a20092edb66c57795f44d6673 690 ProSitePatterns PS00438 Catalase proximal active site signature. 65 81 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_014770 80d20e2a20092edb66c57795f44d6673 690 Pfam PF00199 Catalase 29 413 2.8E-180 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_014770 80d20e2a20092edb66c57795f44d6673 690 Pfam PF06628 Catalase-related immune-responsive 446 510 3.6E-21 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_014770 80d20e2a20092edb66c57795f44d6673 690 PIRSF PIRSF038927 4 690 2.5E-302 T 14-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 D172_014770 80d20e2a20092edb66c57795f44d6673 690 SUPERFAMILY SSF56634 21 520 6.54E-215 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_014770 80d20e2a20092edb66c57795f44d6673 690 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 359 367 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 D172_008800 97b340a4c9d2133636b47712944fdb5c 442 SUPERFAMILY SSF56935 193 442 8.49E-7 T 14-10-2018 D172_008100 1daa23970ba5b5f8b4e77dbc1ba92198 456 Gene3D G3DSA:1.10.275.10 1 117 1.1E-50 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal D172_008100 1daa23970ba5b5f8b4e77dbc1ba92198 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 D172_008100 1daa23970ba5b5f8b4e77dbc1ba92198 456 Gene3D G3DSA:1.10.40.30 382 445 3.3E-153 T 14-10-2018 D172_008100 1daa23970ba5b5f8b4e77dbc1ba92198 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.4E-51 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 D172_008100 1daa23970ba5b5f8b4e77dbc1ba92198 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 1.1E-16 T 14-10-2018 IPR000362 Fumarate lyase family D172_008100 1daa23970ba5b5f8b4e77dbc1ba92198 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.1E-16 T 14-10-2018 IPR000362 Fumarate lyase family D172_008100 1daa23970ba5b5f8b4e77dbc1ba92198 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 1.1E-16 T 14-10-2018 IPR000362 Fumarate lyase family D172_008100 1daa23970ba5b5f8b4e77dbc1ba92198 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.1E-16 T 14-10-2018 IPR000362 Fumarate lyase family D172_008100 1daa23970ba5b5f8b4e77dbc1ba92198 456 SUPERFAMILY SSF48557 10 454 2.98E-109 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 D172_008100 1daa23970ba5b5f8b4e77dbc1ba92198 456 Gene3D G3DSA:1.20.200.10 118 446 3.3E-153 T 14-10-2018 D172_008100 1daa23970ba5b5f8b4e77dbc1ba92198 456 Pfam PF00206 Lyase 14 312 6.6E-69 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal D172_008100 1daa23970ba5b5f8b4e77dbc1ba92198 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 6.0E-141 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D172_007485 92e37d743ea955d607c9008cf16ba336 377 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 256 266 - T 14-10-2018 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007485 92e37d743ea955d607c9008cf16ba336 377 SMART SM00633 69 376 1.8E-80 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007485 92e37d743ea955d607c9008cf16ba336 377 PRINTS PR00134 Glycosyl hydrolase family 10 signature 100 112 4.1E-14 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007485 92e37d743ea955d607c9008cf16ba336 377 PRINTS PR00134 Glycosyl hydrolase family 10 signature 222 234 4.1E-14 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007485 92e37d743ea955d607c9008cf16ba336 377 PRINTS PR00134 Glycosyl hydrolase family 10 signature 194 205 4.1E-14 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007485 92e37d743ea955d607c9008cf16ba336 377 PRINTS PR00134 Glycosyl hydrolase family 10 signature 148 159 4.1E-14 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007485 92e37d743ea955d607c9008cf16ba336 377 SUPERFAMILY SSF51445 24 376 7.84E-102 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_007485 92e37d743ea955d607c9008cf16ba336 377 Pfam PF00331 Glycosyl hydrolase family 10 26 374 3.1E-99 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007485 92e37d743ea955d607c9008cf16ba336 377 Gene3D G3DSA:3.20.20.80 25 376 2.1E-123 T 14-10-2018 D172_004530 6ccbb182b9512d7b85e46b45cae757fb 663 Pfam PF02779 Transketolase, pyrimidine binding domain 356 525 5.0E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D172_004530 6ccbb182b9512d7b85e46b45cae757fb 663 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D172_004530 6ccbb182b9512d7b85e46b45cae757fb 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D172_004530 6ccbb182b9512d7b85e46b45cae757fb 663 SUPERFAMILY SSF52518 5 321 5.33E-119 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_004530 6ccbb182b9512d7b85e46b45cae757fb 663 Gene3D G3DSA:3.40.50.920 540 663 1.5E-40 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D172_004530 6ccbb182b9512d7b85e46b45cae757fb 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 662 0.0 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 D172_004530 6ccbb182b9512d7b85e46b45cae757fb 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 4.7E-167 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D172_004530 6ccbb182b9512d7b85e46b45cae757fb 663 SUPERFAMILY SSF52922 534 662 1.44E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D172_004530 6ccbb182b9512d7b85e46b45cae757fb 663 Pfam PF02780 Transketolase, C-terminal domain 549 655 3.9E-16 T 14-10-2018 IPR033248 Transketolase, C-terminal domain D172_004530 6ccbb182b9512d7b85e46b45cae757fb 663 SUPERFAMILY SSF52518 334 526 3.93E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_004530 6ccbb182b9512d7b85e46b45cae757fb 663 Gene3D G3DSA:3.40.50.970 2 326 1.6E-129 T 14-10-2018 D172_004530 6ccbb182b9512d7b85e46b45cae757fb 663 SMART SM00861 355 527 6.7E-63 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain D172_004530 6ccbb182b9512d7b85e46b45cae757fb 663 Gene3D G3DSA:3.40.50.970 327 538 7.4E-79 T 14-10-2018 D172_000035 bfd36101b44b19e770a096556f0072cb 316 SUPERFAMILY SSF102886 5 302 4.45E-140 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D172_000035 bfd36101b44b19e770a096556f0072cb 316 PIRSF PIRSF000166 1 303 5.7E-129 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D172_000035 bfd36101b44b19e770a096556f0072cb 316 Pfam PF01218 Coproporphyrinogen III oxidase 8 302 7.2E-134 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D172_000035 bfd36101b44b19e770a096556f0072cb 316 PRINTS PR00073 Coprogen oxidase signature 48 69 3.2E-84 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D172_000035 bfd36101b44b19e770a096556f0072cb 316 PRINTS PR00073 Coprogen oxidase signature 31 47 3.2E-84 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D172_000035 bfd36101b44b19e770a096556f0072cb 316 PRINTS PR00073 Coprogen oxidase signature 125 147 3.2E-84 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D172_000035 bfd36101b44b19e770a096556f0072cb 316 PRINTS PR00073 Coprogen oxidase signature 90 114 3.2E-84 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D172_000035 bfd36101b44b19e770a096556f0072cb 316 PRINTS PR00073 Coprogen oxidase signature 162 191 3.2E-84 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D172_000035 bfd36101b44b19e770a096556f0072cb 316 PRINTS PR00073 Coprogen oxidase signature 262 288 3.2E-84 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D172_000035 bfd36101b44b19e770a096556f0072cb 316 PRINTS PR00073 Coprogen oxidase signature 234 261 3.2E-84 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D172_000035 bfd36101b44b19e770a096556f0072cb 316 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 277 56.157 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D172_000035 bfd36101b44b19e770a096556f0072cb 316 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 14-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D172_000035 bfd36101b44b19e770a096556f0072cb 316 Gene3D G3DSA:3.40.1500.10 1 302 1.2E-139 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 D172_005290 e2ccc9c9adbed61c0c20cd89bc7f5d9d 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 53 185 3.6E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_005290 e2ccc9c9adbed61c0c20cd89bc7f5d9d 218 Gene3D G3DSA:3.40.50.1000 4 202 1.1E-48 T 14-10-2018 IPR023214 HAD superfamily D172_005290 e2ccc9c9adbed61c0c20cd89bc7f5d9d 218 SUPERFAMILY SSF56784 4 213 1.25E-47 T 14-10-2018 IPR036412 HAD-like superfamily D172_005290 e2ccc9c9adbed61c0c20cd89bc7f5d9d 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 187 4.2E-34 T 14-10-2018 D172_005290 e2ccc9c9adbed61c0c20cd89bc7f5d9d 218 Gene3D G3DSA:1.10.150.240 16 87 1.1E-48 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D172_016730 f06cc8face877d3079dac06e2e34c10f 156 Gene3D G3DSA:1.20.120.1370 1 156 1.8E-55 T 14-10-2018 IPR038309 Rsd/AlgQ superfamily D172_016730 f06cc8face877d3079dac06e2e34c10f 156 PIRSF PIRSF016548 1 156 3.1E-57 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 D172_016730 f06cc8face877d3079dac06e2e34c10f 156 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 150 1.4E-58 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 D172_008375 e750a1e89e8cd26ed441eef2f33e4b45 552 Gene3D G3DSA:3.40.50.620 30 247 1.2E-103 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_008375 e750a1e89e8cd26ed441eef2f33e4b45 552 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 530 1.6E-60 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D172_008375 e750a1e89e8cd26ed441eef2f33e4b45 552 SUPERFAMILY SSF52374 12 337 1.25E-100 T 14-10-2018 D172_008375 e750a1e89e8cd26ed441eef2f33e4b45 552 Gene3D G3DSA:3.90.800.10 101 209 1.2E-103 T 14-10-2018 D172_008375 e750a1e89e8cd26ed441eef2f33e4b45 552 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 29 550 2.5E-278 T 14-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D172_008375 e750a1e89e8cd26ed441eef2f33e4b45 552 Gene3D G3DSA:1.10.1160.10 261 339 1.2E-35 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 D172_008375 e750a1e89e8cd26ed441eef2f33e4b45 552 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_008375 e750a1e89e8cd26ed441eef2f33e4b45 552 Gene3D G3DSA:2.40.240.10 340 545 6.2E-77 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D172_008375 e750a1e89e8cd26ed441eef2f33e4b45 552 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 548 51.554 T 14-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 D172_008375 e750a1e89e8cd26ed441eef2f33e4b45 552 SUPERFAMILY SSF50715 340 547 7.32E-71 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D172_008375 e750a1e89e8cd26ed441eef2f33e4b45 552 Gene3D G3DSA:2.40.240.10 348 466 6.2E-77 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D172_008375 e750a1e89e8cd26ed441eef2f33e4b45 552 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 1.8E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D172_008375 e750a1e89e8cd26ed441eef2f33e4b45 552 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 1.8E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D172_008375 e750a1e89e8cd26ed441eef2f33e4b45 552 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 1.8E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D172_008375 e750a1e89e8cd26ed441eef2f33e4b45 552 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 1.8E-9 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D172_008375 e750a1e89e8cd26ed441eef2f33e4b45 552 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 29 337 2.4E-119 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 D172_004430 90793ce9f48bfd4c1403b47a1a510631 489 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 D172_004430 90793ce9f48bfd4c1403b47a1a510631 489 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 475 4.1E-159 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 D172_004430 90793ce9f48bfd4c1403b47a1a510631 489 Pfam PF00571 CBS domain 149 200 3.6E-6 T 14-10-2018 IPR000644 CBS domain D172_004430 90793ce9f48bfd4c1403b47a1a510631 489 Pfam PF00571 CBS domain 97 139 2.9E-8 T 14-10-2018 IPR000644 CBS domain D172_004430 90793ce9f48bfd4c1403b47a1a510631 489 SUPERFAMILY SSF54631 96 202 8.84E-28 T 14-10-2018 D172_004430 90793ce9f48bfd4c1403b47a1a510631 489 SMART SM01240 7 475 0.0 T 14-10-2018 D172_004430 90793ce9f48bfd4c1403b47a1a510631 489 PIRSF PIRSF000130 1 489 3.3E-197 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 D172_004430 90793ce9f48bfd4c1403b47a1a510631 489 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 1.1E-188 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 D172_004430 90793ce9f48bfd4c1403b47a1a510631 489 SMART SM00116 96 144 9.1E-9 T 14-10-2018 IPR000644 CBS domain D172_004430 90793ce9f48bfd4c1403b47a1a510631 489 SMART SM00116 158 206 1.1E-7 T 14-10-2018 IPR000644 CBS domain D172_004430 90793ce9f48bfd4c1403b47a1a510631 489 SUPERFAMILY SSF51412 1 479 7.59E-124 T 14-10-2018 D172_004430 90793ce9f48bfd4c1403b47a1a510631 489 Gene3D G3DSA:3.20.20.70 1 488 1.3E-206 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_004430 90793ce9f48bfd4c1403b47a1a510631 489 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 488 82.189 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 Pfam PF00563 EAL domain 1249 1481 1.3E-65 T 14-10-2018 IPR001633 EAL domain D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 SUPERFAMILY SSF50998 181 616 1.73E-12 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1072 1225 3.5E-42 T 14-10-2018 IPR000160 GGDEF domain D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 Gene3D G3DSA:2.130.10.10 23 343 6.9E-52 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 Pfam PF08448 PAS fold 954 1062 4.7E-7 T 14-10-2018 IPR013656 PAS fold-4 D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 Pfam PF07495 Y_Y_Y domain 718 779 4.8E-9 T 14-10-2018 IPR011123 Two component regulator three Y D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 Gene3D G3DSA:3.30.450.20 822 935 4.6E-18 T 14-10-2018 D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 Pfam PF08447 PAS fold 852 933 6.6E-11 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 SUPERFAMILY SSF55785 846 939 2.72E-8 T 14-10-2018 IPR035965 PAS domain superfamily D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 SMART SM00052 1243 1486 5.1E-84 T 14-10-2018 IPR001633 EAL domain D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 SUPERFAMILY SSF55073 1077 1235 7.85E-43 T 14-10-2018 IPR029787 Nucleotide cyclase D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 Gene3D G3DSA:2.60.40.10 666 785 3.1E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 SUPERFAMILY SSF50998 36 339 9.02E-12 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 SUPERFAMILY SSF55785 959 1068 2.47E-12 T 14-10-2018 IPR035965 PAS domain superfamily D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 SMART SM00086 898 940 19.0 T 14-10-2018 IPR001610 PAC motif D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 SMART SM00086 1019 1061 4.9 T 14-10-2018 IPR001610 PAC motif D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 949 1068 7.4E-11 T 14-10-2018 IPR000014 PAS domain D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 SMART SM00267 1061 1233 6.9E-55 T 14-10-2018 IPR000160 GGDEF domain D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 Gene3D G3DSA:3.20.20.450 1247 1497 5.7E-82 T 14-10-2018 IPR035919 EAL domain superfamily D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 SUPERFAMILY SSF141868 1248 1492 3.92E-76 T 14-10-2018 IPR035919 EAL domain superfamily D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 Gene3D G3DSA:2.130.10.10 516 665 1.8E-23 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1070 1230 1.1E-36 T 14-10-2018 IPR000160 GGDEF domain D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 Gene3D G3DSA:2.130.10.10 352 497 3.9E-11 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 Gene3D G3DSA:3.30.450.20 944 1065 3.6E-14 T 14-10-2018 D172_002650 3e2e9cc23a4208b36c5cd9e587020fca 1500 Gene3D G3DSA:3.30.70.270 1066 1246 6.5E-53 T 14-10-2018 D172_002240 53bf641a98b36ad456c5e3f8fa80d6e2 161 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 79 99 4.2E-40 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D172_002240 53bf641a98b36ad456c5e3f8fa80d6e2 161 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 129 147 4.2E-40 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D172_002240 53bf641a98b36ad456c5e3f8fa80d6e2 161 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 19 36 4.2E-40 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D172_002240 53bf641a98b36ad456c5e3f8fa80d6e2 161 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 103 125 4.2E-40 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D172_002240 53bf641a98b36ad456c5e3f8fa80d6e2 161 SUPERFAMILY SSF54611 7 148 4.58E-53 T 14-10-2018 IPR035958 SecB-like superfamily D172_002240 53bf641a98b36ad456c5e3f8fa80d6e2 161 Pfam PF02556 Preprotein translocase subunit SecB 12 149 1.3E-57 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D172_002240 53bf641a98b36ad456c5e3f8fa80d6e2 161 Hamap MF_00821 Protein-export protein SecB [secB]. 1 151 33.682 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D172_002240 53bf641a98b36ad456c5e3f8fa80d6e2 161 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 13 148 1.8E-60 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 D172_002240 53bf641a98b36ad456c5e3f8fa80d6e2 161 Gene3D G3DSA:3.10.420.10 8 157 3.6E-58 T 14-10-2018 IPR035958 SecB-like superfamily D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 SUPERFAMILY SSF75615 114 209 8.89E-27 T 14-10-2018 D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 Gene3D G3DSA:3.30.950.10 331 460 7.3E-48 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 220 234 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 5.2E-71 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 Pfam PF13241 Putative NAD(P)-binding 6 115 2.5E-30 T 14-10-2018 D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 217 427 7.0E-50 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 PIRSF PIRSF036426 1 467 1.6E-199 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 Hamap MF_01646 Siroheme synthase [cysG]. 1 459 51.451 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 295 328 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 SUPERFAMILY SSF51735 2 113 3.74E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 9.4E-20 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 Gene3D G3DSA:3.40.50.720 1 112 1.2E-34 T 14-10-2018 D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 Gene3D G3DSA:3.40.1010.10 214 330 1.9E-43 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 Pfam PF14824 Sirohaem biosynthesis protein central 119 144 7.6E-8 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 Gene3D G3DSA:1.10.8.210 149 211 8.5E-12 T 14-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 215 450 3.4E-92 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 Gene3D G3DSA:3.30.160.110 113 148 1.4E-18 T 14-10-2018 D172_001560 7a70c177afa1f9bc26d031d6ef623ead 475 SUPERFAMILY SSF53790 214 457 5.1E-80 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 D172_005265 c040c2e1305f805351d6deb71358cd1d 284 SUPERFAMILY SSF103481 183 278 8.37E-8 T 14-10-2018 D172_005265 c040c2e1305f805351d6deb71358cd1d 284 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 14 275 5.7E-75 T 14-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 D172_005265 c040c2e1305f805351d6deb71358cd1d 284 Pfam PF00892 EamA-like transporter family 141 278 7.1E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_005265 c040c2e1305f805351d6deb71358cd1d 284 Pfam PF00892 EamA-like transporter family 5 130 3.3E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_005265 c040c2e1305f805351d6deb71358cd1d 284 SUPERFAMILY SSF103481 38 132 4.71E-6 T 14-10-2018 D172_000825 eb242cc506be2d52e2472c385e0b183b 97 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 30 91 1.2E-9 T 14-10-2018 IPR018660 C-type lysozyme inhibitor D172_000825 eb242cc506be2d52e2472c385e0b183b 97 Gene3D G3DSA:2.40.128.200 23 95 1.3E-12 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily D172_000825 eb242cc506be2d52e2472c385e0b183b 97 SUPERFAMILY SSF141488 28 93 1.7E-15 T 14-10-2018 IPR036328 C-type lysozyme inhibitor superfamily D172_003600 a5cab612cd8ab16935cfed2bb871b761 593 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 549 566 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D172_003600 a5cab612cd8ab16935cfed2bb871b761 593 Gene3D G3DSA:3.20.20.70 1 463 4.5E-167 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_003600 a5cab612cd8ab16935cfed2bb871b761 593 SUPERFAMILY SSF51230 517 592 3.53E-20 T 14-10-2018 IPR011053 Single hybrid motif D172_003600 a5cab612cd8ab16935cfed2bb871b761 593 Pfam PF02436 Conserved carboxylase domain 291 497 2.8E-58 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 D172_003600 a5cab612cd8ab16935cfed2bb871b761 593 Pfam PF00364 Biotin-requiring enzyme 527 591 1.1E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment D172_003600 a5cab612cd8ab16935cfed2bb871b761 593 Gene3D G3DSA:2.40.50.100 527 593 2.9E-22 T 14-10-2018 D172_003600 a5cab612cd8ab16935cfed2bb871b761 593 Pfam PF00682 HMGL-like 4 269 8.8E-54 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 D172_003600 a5cab612cd8ab16935cfed2bb871b761 593 SUPERFAMILY SSF89000 296 460 2.08E-49 T 14-10-2018 D172_003600 a5cab612cd8ab16935cfed2bb871b761 593 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 6 588 7.0E-263 T 14-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 D172_003600 a5cab612cd8ab16935cfed2bb871b761 593 SUPERFAMILY SSF51569 2 281 4.58E-88 T 14-10-2018 D172_002735 995336865bd07a7930f470d934385c42 244 PIRSF PIRSF015601 3 242 1.2E-55 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 D172_002735 995336865bd07a7930f470d934385c42 244 Pfam PF04452 RNA methyltransferase 18 236 2.2E-71 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 D172_002735 995336865bd07a7930f470d934385c42 244 SUPERFAMILY SSF75217 75 242 4.36E-52 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases D172_002735 995336865bd07a7930f470d934385c42 244 SUPERFAMILY SSF88697 3 69 2.41E-15 T 14-10-2018 IPR015947 PUA-like superfamily D172_002735 995336865bd07a7930f470d934385c42 244 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 4 242 2.5E-74 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 D172_002735 995336865bd07a7930f470d934385c42 244 Gene3D G3DSA:2.40.240.20 1 68 3.2E-19 T 14-10-2018 D172_002735 995336865bd07a7930f470d934385c42 244 Gene3D G3DSA:3.40.1280.10 74 244 5.2E-63 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D172_003510 5e7215e9520ea5cc0e575f1125e92e60 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 D172_003510 5e7215e9520ea5cc0e575f1125e92e60 129 SUPERFAMILY SSF54211 4 129 3.72E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_003510 5e7215e9520ea5cc0e575f1125e92e60 129 Pfam PF00380 Ribosomal protein S9/S16 9 129 9.6E-47 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 D172_003510 5e7215e9520ea5cc0e575f1125e92e60 129 Gene3D G3DSA:3.30.230.10 1 129 3.9E-54 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D172_003510 5e7215e9520ea5cc0e575f1125e92e60 129 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 129 31.273 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid D172_020810 83fade16f35e26be89f6668a84122e4f 141 Gene3D G3DSA:1.20.120.580 7 140 1.8E-9 T 14-10-2018 IPR037038 Bsu32300-like superfamily D172_020810 83fade16f35e26be89f6668a84122e4f 141 Pfam PF01934 Protein of unknown function DUF86 12 129 7.4E-25 T 14-10-2018 IPR008201 Protein of unknown function DUF86 D172_020810 83fade16f35e26be89f6668a84122e4f 141 SUPERFAMILY SSF81593 26 123 1.06E-5 T 14-10-2018 D172_013080 7e4149a6e34b515518ad79f67e4f45b8 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 3.2E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_013080 7e4149a6e34b515518ad79f67e4f45b8 234 Gene3D G3DSA:3.40.50.2300 2 122 1.3E-32 T 14-10-2018 D172_013080 7e4149a6e34b515518ad79f67e4f45b8 234 SMART SM00862 153 229 1.4E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_013080 7e4149a6e34b515518ad79f67e4f45b8 234 Pfam PF00072 Response regulator receiver domain 7 116 8.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_013080 7e4149a6e34b515518ad79f67e4f45b8 234 SUPERFAMILY SSF46894 130 230 5.39E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_013080 7e4149a6e34b515518ad79f67e4f45b8 234 Gene3D G3DSA:1.10.10.10 123 234 1.3E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_013080 7e4149a6e34b515518ad79f67e4f45b8 234 SMART SM00448 5 115 8.5E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_013080 7e4149a6e34b515518ad79f67e4f45b8 234 SUPERFAMILY SSF52172 5 124 6.69E-37 T 14-10-2018 IPR011006 CheY-like superfamily D172_001035 d737311a28e0f63596dc0922c2fac263 103 SMART SM01403 7 101 5.7E-57 T 14-10-2018 IPR027486 Ribosomal protein S10 domain D172_001035 d737311a28e0f63596dc0922c2fac263 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.4E-35 T 14-10-2018 IPR027486 Ribosomal protein S10 domain D172_001035 d737311a28e0f63596dc0922c2fac263 103 Gene3D G3DSA:3.30.70.600 1 103 7.6E-38 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily D172_001035 d737311a28e0f63596dc0922c2fac263 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.7E-46 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001035 d737311a28e0f63596dc0922c2fac263 103 SUPERFAMILY SSF54999 5 101 4.32E-37 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily D172_001035 d737311a28e0f63596dc0922c2fac263 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.333 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001035 d737311a28e0f63596dc0922c2fac263 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.6E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001035 d737311a28e0f63596dc0922c2fac263 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.6E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001035 d737311a28e0f63596dc0922c2fac263 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.6E-18 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001035 d737311a28e0f63596dc0922c2fac263 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_000210 01dca648f4fc13f87662106bcfd29bc8 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 5.0E-289 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 D172_000210 01dca648f4fc13f87662106bcfd29bc8 629 Gene3D G3DSA:1.10.10.1800 459 550 1.2E-28 T 14-10-2018 D172_000210 01dca648f4fc13f87662106bcfd29bc8 629 Gene3D G3DSA:3.50.50.60 1 232 1.6E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_000210 01dca648f4fc13f87662106bcfd29bc8 629 Gene3D G3DSA:3.50.50.60 301 458 4.1E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_000210 01dca648f4fc13f87662106bcfd29bc8 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.974 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 D172_000210 01dca648f4fc13f87662106bcfd29bc8 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 D172_000210 01dca648f4fc13f87662106bcfd29bc8 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 D172_000210 01dca648f4fc13f87662106bcfd29bc8 629 Pfam PF13932 GidA associated domain 402 616 2.1E-76 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 D172_000210 01dca648f4fc13f87662106bcfd29bc8 629 Gene3D G3DSA:1.10.150.570 570 622 2.7E-23 T 14-10-2018 D172_000210 01dca648f4fc13f87662106bcfd29bc8 629 Pfam PF01134 Glucose inhibited division protein A 8 399 4.4E-171 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 D172_000210 01dca648f4fc13f87662106bcfd29bc8 629 SUPERFAMILY SSF51905 6 261 7.73E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_000210 01dca648f4fc13f87662106bcfd29bc8 629 SMART SM01228 546 617 2.8E-41 T 14-10-2018 D172_002625 bb20059f2b553092310cd8dee728de8f 314 SUPERFAMILY SSF51735 99 284 8.05E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_002625 bb20059f2b553092310cd8dee728de8f 314 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 283 7.0E-49 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 D172_002625 bb20059f2b553092310cd8dee728de8f 314 Gene3D G3DSA:3.40.50.720 16 311 5.4E-109 T 14-10-2018 D172_002625 bb20059f2b553092310cd8dee728de8f 314 Gene3D G3DSA:3.40.50.720 95 282 5.4E-109 T 14-10-2018 D172_002625 bb20059f2b553092310cd8dee728de8f 314 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 220 236 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site D172_002625 bb20059f2b553092310cd8dee728de8f 314 SMART SM00997 131 273 0.0023 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 D172_002625 bb20059f2b553092310cd8dee728de8f 314 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 191 213 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site D172_002625 bb20059f2b553092310cd8dee728de8f 314 SUPERFAMILY SSF52283 1 119 9.26E-31 T 14-10-2018 D172_002625 bb20059f2b553092310cd8dee728de8f 314 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 312 6.1E-25 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 D172_002880 68589ded76e24ab1b73239f74e2c69b7 290 Gene3D G3DSA:3.40.190.10 160 249 2.0E-7 T 14-10-2018 D172_002880 68589ded76e24ab1b73239f74e2c69b7 290 Pfam PF03466 LysR substrate binding domain 114 279 5.5E-11 T 14-10-2018 IPR005119 LysR, substrate-binding D172_002880 68589ded76e24ab1b73239f74e2c69b7 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.8E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_002880 68589ded76e24ab1b73239f74e2c69b7 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.8E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_002880 68589ded76e24ab1b73239f74e2c69b7 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.8E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_002880 68589ded76e24ab1b73239f74e2c69b7 290 Gene3D G3DSA:3.40.190.10 94 278 2.0E-7 T 14-10-2018 D172_002880 68589ded76e24ab1b73239f74e2c69b7 290 SUPERFAMILY SSF53850 87 279 1.41E-18 T 14-10-2018 D172_002880 68589ded76e24ab1b73239f74e2c69b7 290 Gene3D G3DSA:1.10.10.10 1 83 2.0E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_002880 68589ded76e24ab1b73239f74e2c69b7 290 SUPERFAMILY SSF46785 1 79 1.55E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_002880 68589ded76e24ab1b73239f74e2c69b7 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.8E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 3.5E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 3.5E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.5E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.5E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 3.5E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 3.5E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 3.5E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 3.5E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 3.5E-90 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 Gene3D G3DSA:3.30.70.1430 578 679 0.0 T 14-10-2018 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 SUPERFAMILY SSF82693 576 682 3.14E-26 T 14-10-2018 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 Gene3D G3DSA:3.30.70.1320 135 335 0.0 T 14-10-2018 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 SUPERFAMILY SSF82693 138 333 1.52E-26 T 14-10-2018 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 SUPERFAMILY SSF82714 185 275 4.84E-21 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 SUPERFAMILY SSF82866 299 499 2.88E-50 T 14-10-2018 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 Gene3D G3DSA:3.30.2090.10 732 820 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 SUPERFAMILY SSF82693 41 133 2.46E-27 T 14-10-2018 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1040 0.0 T 14-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 Gene3D G3DSA:1.20.1640.10 10 523 0.0 T 14-10-2018 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 Gene3D G3DSA:3.30.70.1430 40 828 0.0 T 14-10-2018 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 SUPERFAMILY SSF82714 733 818 6.8E-22 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 SUPERFAMILY SSF82866 817 1043 1.06E-41 T 14-10-2018 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 Gene3D G3DSA:1.20.1640.10 524 1034 0.0 T 14-10-2018 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 Gene3D G3DSA:3.30.2090.10 181 278 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1037 0.0 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_019115 cfdcec1bc354d0695320c3ca0c797871 1050 Gene3D G3DSA:3.30.70.1440 680 877 0.0 T 14-10-2018 D172_014105 f8abd77e96649c134e63b50e16409598 650 SMART SM00306 467 565 2.6E-12 T 14-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 D172_014105 f8abd77e96649c134e63b50e16409598 650 Pfam PF07591 Pretoxin HINT domain 475 588 1.6E-8 T 14-10-2018 D172_014105 f8abd77e96649c134e63b50e16409598 650 SUPERFAMILY SSF51294 469 592 4.32E-14 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 D172_014105 f8abd77e96649c134e63b50e16409598 650 Gene3D G3DSA:2.170.16.10 469 613 8.0E-18 T 14-10-2018 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 Gene3D G3DSA:3.90.640.10 238 314 5.3E-109 T 14-10-2018 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 SUPERFAMILY SSF100920 387 537 1.15E-49 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 620 42.084 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 SUPERFAMILY SSF53067 200 380 1.49E-49 T 14-10-2018 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 SUPERFAMILY SSF100934 507 619 1.53E-32 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 619 5.5E-263 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 Gene3D G3DSA:3.30.420.40 22 377 5.3E-109 T 14-10-2018 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 Gene3D G3DSA:1.20.1270.10 524 619 1.7E-23 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 Pfam PF00012 Hsp70 protein 21 603 8.0E-184 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 SUPERFAMILY SSF53067 19 196 1.99E-47 T 14-10-2018 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 Gene3D G3DSA:3.30.420.40 194 364 5.3E-109 T 14-10-2018 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 335 349 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 Gene3D G3DSA:2.60.34.10 382 523 1.6E-49 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 PRINTS PR00301 70kDa heat shock protein signature 20 33 4.8E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 PRINTS PR00301 70kDa heat shock protein signature 388 407 4.8E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 PRINTS PR00301 70kDa heat shock protein signature 48 60 4.8E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 PRINTS PR00301 70kDa heat shock protein signature 332 348 4.8E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 PRINTS PR00301 70kDa heat shock protein signature 363 383 4.8E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 PRINTS PR00301 70kDa heat shock protein signature 469 485 4.8E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 PRINTS PR00301 70kDa heat shock protein signature 152 172 4.8E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_015485 214a86eaaccfe9ede03fadd7c48a3b1d 620 PRINTS PR00301 70kDa heat shock protein signature 211 221 4.8E-54 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_018985 842a2db9c7d3754fceefcfff5fb1bb78 1459 SUPERFAMILY SSF49785 333 487 3.57E-7 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_018985 842a2db9c7d3754fceefcfff5fb1bb78 1459 SUPERFAMILY SSF103647 667 703 6.28E-5 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 D172_018985 842a2db9c7d3754fceefcfff5fb1bb78 1459 Gene3D G3DSA:2.60.120.260 526 662 4.7E-33 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_018985 842a2db9c7d3754fceefcfff5fb1bb78 1459 SMART SM00606 540 660 5.5E-10 T 14-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 D172_018985 842a2db9c7d3754fceefcfff5fb1bb78 1459 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 1180 1459 7.3E-89 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase D172_018985 842a2db9c7d3754fceefcfff5fb1bb78 1459 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 1022 1115 5.9E-16 T 14-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase D172_018985 842a2db9c7d3754fceefcfff5fb1bb78 1459 SUPERFAMILY SSF103647 487 552 8.24E-6 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 D172_018985 842a2db9c7d3754fceefcfff5fb1bb78 1459 SUPERFAMILY SSF49899 26 300 5.41E-48 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D172_018985 842a2db9c7d3754fceefcfff5fb1bb78 1459 Gene3D G3DSA:2.60.120.430 315 482 4.2E-8 T 14-10-2018 D172_018985 842a2db9c7d3754fceefcfff5fb1bb78 1459 Pfam PF03422 Carbohydrate binding module (family 6) 553 659 5.8E-13 T 14-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 D172_018985 842a2db9c7d3754fceefcfff5fb1bb78 1459 SUPERFAMILY SSF49785 525 659 1.31E-24 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_018985 842a2db9c7d3754fceefcfff5fb1bb78 1459 Pfam PF00722 Glycosyl hydrolases family 16 82 293 3.9E-13 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 D172_018985 842a2db9c7d3754fceefcfff5fb1bb78 1459 Gene3D G3DSA:2.60.120.200 22 303 1.1E-57 T 14-10-2018 D172_018985 842a2db9c7d3754fceefcfff5fb1bb78 1459 SUPERFAMILY SSF46626 1302 1459 1.59E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_009815 73e65ffb347305c0153c77f373396be0 257 Pfam PF00722 Glycosyl hydrolases family 16 47 232 3.2E-16 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 D172_009815 73e65ffb347305c0153c77f373396be0 257 SUPERFAMILY SSF49899 43 256 3.3E-25 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D172_009815 73e65ffb347305c0153c77f373396be0 257 PRINTS PR00737 Glycosyl hydrolase family 16 signature 74 92 9.6E-5 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 D172_009815 73e65ffb347305c0153c77f373396be0 257 PRINTS PR00737 Glycosyl hydrolase family 16 signature 93 109 9.6E-5 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 D172_009815 73e65ffb347305c0153c77f373396be0 257 PRINTS PR00737 Glycosyl hydrolase family 16 signature 116 131 9.6E-5 T 14-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 D172_009815 73e65ffb347305c0153c77f373396be0 257 Gene3D G3DSA:2.60.120.200 21 255 1.1E-24 T 14-10-2018 D172_002810 799e8e55e72f8fa2909cb2b22f0f3621 111 SUPERFAMILY SSF89946 1 111 5.23E-36 T 14-10-2018 IPR036701 RraB-like superfamily D172_002810 799e8e55e72f8fa2909cb2b22f0f3621 111 Pfam PF06877 Regulator of ribonuclease activity B 7 107 1.4E-28 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain D172_002810 799e8e55e72f8fa2909cb2b22f0f3621 111 PIRSF PIRSF018193 1 111 6.0E-41 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B D172_002810 799e8e55e72f8fa2909cb2b22f0f3621 111 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 1 111 28.413 T 14-10-2018 IPR016716 Regulator of ribonuclease activity B D172_002810 799e8e55e72f8fa2909cb2b22f0f3621 111 Gene3D G3DSA:3.30.70.970 1 111 7.9E-44 T 14-10-2018 IPR036701 RraB-like superfamily D172_008700 fbdc039aca28fd7d56e55b73d5cf4351 521 SMART SM00382 336 504 3.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_008700 fbdc039aca28fd7d56e55b73d5cf4351 521 SMART SM00382 18 230 1.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_008700 fbdc039aca28fd7d56e55b73d5cf4351 521 SUPERFAMILY SSF52540 3 229 2.27E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_008700 fbdc039aca28fd7d56e55b73d5cf4351 521 Pfam PF00005 ABC transporter 10 176 6.5E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_008700 fbdc039aca28fd7d56e55b73d5cf4351 521 SUPERFAMILY SSF52540 289 512 1.75E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_008700 fbdc039aca28fd7d56e55b73d5cf4351 521 Pfam PF12848 ABC transporter 216 301 1.9E-20 T 14-10-2018 IPR032781 ABC-transporter extension domain D172_008700 fbdc039aca28fd7d56e55b73d5cf4351 521 Pfam PF00005 ABC transporter 334 459 9.4E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_008700 fbdc039aca28fd7d56e55b73d5cf4351 521 Gene3D G3DSA:3.40.50.300 2 272 6.4E-55 T 14-10-2018 D172_008700 fbdc039aca28fd7d56e55b73d5cf4351 521 Gene3D G3DSA:3.40.50.300 274 521 7.9E-52 T 14-10-2018 D172_007755 50e3311824739e87ec8eeaa90fff59d2 206 Pfam PF01081 KDPG and KHG aldolase 8 185 7.0E-31 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D172_007755 50e3311824739e87ec8eeaa90fff59d2 206 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 127 140 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D172_007755 50e3311824739e87ec8eeaa90fff59d2 206 Gene3D G3DSA:3.20.20.70 5 205 2.8E-56 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_007755 50e3311824739e87ec8eeaa90fff59d2 206 SUPERFAMILY SSF51569 4 203 4.21E-54 T 14-10-2018 D172_016860 0c1bbe190bef44b40397f80af4255a5a 108 SUPERFAMILY SSF159283 55 107 3.27E-11 T 14-10-2018 D172_016860 0c1bbe190bef44b40397f80af4255a5a 108 Gene3D G3DSA:3.90.550.10 10 108 9.7E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_002350 9adb5b69eb3c2b539d7f07d3fc9da5a3 888 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 7 887 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 D172_002350 9adb5b69eb3c2b539d7f07d3fc9da5a3 888 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 361 427 1.0E-4 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D172_002350 9adb5b69eb3c2b539d7f07d3fc9da5a3 888 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 292 2.9E-8 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 D172_002350 9adb5b69eb3c2b539d7f07d3fc9da5a3 888 SUPERFAMILY SSF52518 475 702 8.24E-99 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_002350 9adb5b69eb3c2b539d7f07d3fc9da5a3 888 Gene3D G3DSA:3.40.50.970 473 707 3.9E-110 T 14-10-2018 D172_002350 9adb5b69eb3c2b539d7f07d3fc9da5a3 888 SUPERFAMILY SSF52922 703 887 6.5E-56 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D172_002350 9adb5b69eb3c2b539d7f07d3fc9da5a3 888 Gene3D G3DSA:3.40.50.920 708 888 1.3E-66 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 D172_002350 9adb5b69eb3c2b539d7f07d3fc9da5a3 888 SUPERFAMILY SSF52518 57 469 1.25E-137 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_002350 9adb5b69eb3c2b539d7f07d3fc9da5a3 888 Gene3D G3DSA:3.40.50.970 56 472 1.3E-127 T 14-10-2018 D172_002350 9adb5b69eb3c2b539d7f07d3fc9da5a3 888 PIRSF PIRSF000156 1 888 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 D172_018055 7f0842b8bd2f4f7e403bc4766f85b38a 490 SUPERFAMILY SSF51445 2 432 7.04E-79 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_018055 7f0842b8bd2f4f7e403bc4766f85b38a 490 SMART SM00642 7 429 5.7E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D172_018055 7f0842b8bd2f4f7e403bc4766f85b38a 490 PIRSF PIRSF003059 1 487 3.1E-156 T 14-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related D172_018055 7f0842b8bd2f4f7e403bc4766f85b38a 490 Gene3D G3DSA:3.90.400.10 89 172 2.4E-125 T 14-10-2018 D172_018055 7f0842b8bd2f4f7e403bc4766f85b38a 490 Pfam PF00128 Alpha amylase, catalytic domain 37 242 8.1E-11 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D172_018055 7f0842b8bd2f4f7e403bc4766f85b38a 490 TIGRFAM TIGR03852 sucrose_gtfA: sucrose phosphorylase 4 441 1.4E-129 T 14-10-2018 IPR022527 Sucrose phosphorylase GO:0004645|GO:0044262 D172_018055 7f0842b8bd2f4f7e403bc4766f85b38a 490 Gene3D G3DSA:3.20.20.80 8 413 2.4E-125 T 14-10-2018 D172_011795 894099ef33c4845dec71880e16e09d6e 672 Gene3D G3DSA:3.40.50.10190 585 670 9.9E-27 T 14-10-2018 IPR036420 BRCT domain superfamily D172_011795 894099ef33c4845dec71880e16e09d6e 672 Pfam PF14520 Helix-hairpin-helix domain 446 501 5.9E-5 T 14-10-2018 D172_011795 894099ef33c4845dec71880e16e09d6e 672 Gene3D G3DSA:1.10.150.20 506 584 4.8E-27 T 14-10-2018 D172_011795 894099ef33c4845dec71880e16e09d6e 672 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 1.6E-35 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 D172_011795 894099ef33c4845dec71880e16e09d6e 672 PIRSF PIRSF001604 1 671 6.5E-254 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 D172_011795 894099ef33c4845dec71880e16e09d6e 672 Gene3D G3DSA:2.20.70.80 391 431 7.2E-20 T 14-10-2018 D172_011795 894099ef33c4845dec71880e16e09d6e 672 Gene3D G3DSA:3.30.470.90 70 317 3.6E-99 T 14-10-2018 D172_011795 894099ef33c4845dec71880e16e09d6e 672 Hamap MF_01588 DNA ligase [ligA]. 3 667 53.15 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 D172_011795 894099ef33c4845dec71880e16e09d6e 672 SMART SM00278 480 499 220.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D172_011795 894099ef33c4845dec71880e16e09d6e 672 SMART SM00278 446 465 160.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D172_011795 894099ef33c4845dec71880e16e09d6e 672 SMART SM00278 544 563 380.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D172_011795 894099ef33c4845dec71880e16e09d6e 672 Gene3D G3DSA:1.10.150.20 432 505 2.5E-29 T 14-10-2018 D172_011795 894099ef33c4845dec71880e16e09d6e 672 Gene3D G3DSA:1.10.287.610 3 69 1.1E-26 T 14-10-2018 D172_011795 894099ef33c4845dec71880e16e09d6e 672 SUPERFAMILY SSF47781 404 583 1.3E-57 T 14-10-2018 IPR010994 RuvA domain 2-like D172_011795 894099ef33c4845dec71880e16e09d6e 672 SMART SM00292 593 670 8.4E-15 T 14-10-2018 IPR001357 BRCT domain D172_011795 894099ef33c4845dec71880e16e09d6e 672 Pfam PF12826 Helix-hairpin-helix motif 510 573 1.6E-19 T 14-10-2018 D172_011795 894099ef33c4845dec71880e16e09d6e 672 SMART SM00532 4 448 3.9E-291 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 D172_011795 894099ef33c4845dec71880e16e09d6e 672 Gene3D G3DSA:2.40.50.140 318 390 4.2E-34 T 14-10-2018 D172_011795 894099ef33c4845dec71880e16e09d6e 672 SUPERFAMILY SSF50249 318 399 6.34E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_011795 894099ef33c4845dec71880e16e09d6e 672 SUPERFAMILY SSF52113 591 669 1.23E-19 T 14-10-2018 IPR036420 BRCT domain superfamily D172_011795 894099ef33c4845dec71880e16e09d6e 672 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 318 7.2E-131 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 D172_011795 894099ef33c4845dec71880e16e09d6e 672 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 5.3E-10 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 D172_011795 894099ef33c4845dec71880e16e09d6e 672 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site D172_011795 894099ef33c4845dec71880e16e09d6e 672 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 593 667 7.6E-14 T 14-10-2018 IPR001357 BRCT domain D172_011795 894099ef33c4845dec71880e16e09d6e 672 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 663 1.2E-259 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 D172_011795 894099ef33c4845dec71880e16e09d6e 672 SUPERFAMILY SSF56091 5 316 1.87E-120 T 14-10-2018 D172_011795 894099ef33c4845dec71880e16e09d6e 672 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site D172_010775 7c34f0f38e2b3ac08f45f27487d41beb 162 Gene3D G3DSA:3.30.1060.10 1 159 1.7E-40 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_010775 7c34f0f38e2b3ac08f45f27487d41beb 162 SUPERFAMILY SSF55068 5 153 9.29E-48 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_010775 7c34f0f38e2b3ac08f45f27487d41beb 162 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 6 156 25.795 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_010775 7c34f0f38e2b3ac08f45f27487d41beb 162 Pfam PF01625 Peptide methionine sulfoxide reductase 8 151 1.3E-41 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_002660 9a42f7d31f0ff0d7f28f370352884ea5 889 Pfam PF13302 Acetyltransferase (GNAT) domain 735 872 2.2E-9 T 14-10-2018 IPR000182 GNAT domain D172_002660 9a42f7d31f0ff0d7f28f370352884ea5 889 SUPERFAMILY SSF52210 127 291 3.92E-40 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D172_002660 9a42f7d31f0ff0d7f28f370352884ea5 889 SMART SM00881 9 104 1.3E-30 T 14-10-2018 IPR003781 CoA-binding GO:0048037 D172_002660 9a42f7d31f0ff0d7f28f370352884ea5 889 Gene3D G3DSA:3.40.50.720 3 127 2.7E-34 T 14-10-2018 D172_002660 9a42f7d31f0ff0d7f28f370352884ea5 889 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 149 286 3.0E-51 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain D172_002660 9a42f7d31f0ff0d7f28f370352884ea5 889 SUPERFAMILY SSF52210 298 454 1.7E-29 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D172_002660 9a42f7d31f0ff0d7f28f370352884ea5 889 SUPERFAMILY SSF56059 492 720 4.86E-25 T 14-10-2018 D172_002660 9a42f7d31f0ff0d7f28f370352884ea5 889 SUPERFAMILY SSF51735 3 137 4.93E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_002660 9a42f7d31f0ff0d7f28f370352884ea5 889 Pfam PF13549 ATP-grasp domain 482 701 2.0E-63 T 14-10-2018 D172_002660 9a42f7d31f0ff0d7f28f370352884ea5 889 Gene3D G3DSA:3.30.470.20 488 698 4.3E-53 T 14-10-2018 D172_002660 9a42f7d31f0ff0d7f28f370352884ea5 889 SUPERFAMILY SSF55729 699 877 3.14E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_002660 9a42f7d31f0ff0d7f28f370352884ea5 889 Gene3D G3DSA:3.40.630.30 717 888 4.3E-38 T 14-10-2018 D172_002660 9a42f7d31f0ff0d7f28f370352884ea5 889 Pfam PF13380 CoA binding domain 14 131 5.5E-23 T 14-10-2018 IPR003781 CoA-binding GO:0048037 D172_002660 9a42f7d31f0ff0d7f28f370352884ea5 889 Gene3D G3DSA:3.40.50.261 292 461 7.4E-41 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D172_002660 9a42f7d31f0ff0d7f28f370352884ea5 889 Gene3D G3DSA:3.40.50.261 128 289 2.2E-53 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 D172_002660 9a42f7d31f0ff0d7f28f370352884ea5 889 Gene3D G3DSA:3.30.1490.20 507 584 4.3E-53 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D172_009270 c558572f81a8d38091a2d6f9375461c1 185 Pfam PF10282 Lactonase, 7-bladed beta-propeller 2 182 5.2E-52 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller D172_009270 c558572f81a8d38091a2d6f9375461c1 185 Gene3D G3DSA:2.130.10.10 1 185 3.6E-51 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_009270 c558572f81a8d38091a2d6f9375461c1 185 SUPERFAMILY SSF51004 2 166 5.36E-22 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily D172_012050 35a63cf1411b8a39980f7262bbc689f4 294 Pfam PF03471 Transporter associated domain 206 281 6.6E-20 T 14-10-2018 IPR005170 Transporter-associated domain D172_012050 35a63cf1411b8a39980f7262bbc689f4 294 Pfam PF00571 CBS domain 67 124 9.6E-8 T 14-10-2018 IPR000644 CBS domain D172_012050 35a63cf1411b8a39980f7262bbc689f4 294 Pfam PF00571 CBS domain 139 188 5.6E-6 T 14-10-2018 IPR000644 CBS domain D172_012050 35a63cf1411b8a39980f7262bbc689f4 294 Gene3D G3DSA:3.30.465.10 199 291 2.6E-29 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 D172_012050 35a63cf1411b8a39980f7262bbc689f4 294 SMART SM01091 205 283 5.4E-25 T 14-10-2018 IPR005170 Transporter-associated domain D172_012050 35a63cf1411b8a39980f7262bbc689f4 294 SMART SM00116 76 125 0.38 T 14-10-2018 IPR000644 CBS domain D172_012050 35a63cf1411b8a39980f7262bbc689f4 294 SMART SM00116 140 188 0.25 T 14-10-2018 IPR000644 CBS domain D172_012050 35a63cf1411b8a39980f7262bbc689f4 294 SUPERFAMILY SSF56176 203 287 2.37E-22 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D172_012050 35a63cf1411b8a39980f7262bbc689f4 294 Gene3D G3DSA:3.10.580.10 46 198 1.3E-52 T 14-10-2018 D172_012050 35a63cf1411b8a39980f7262bbc689f4 294 SUPERFAMILY SSF54631 56 199 2.02E-32 T 14-10-2018 D172_009045 07721fb7e2b7edd891ca56b586e5d452 667 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 616 633 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D172_009045 07721fb7e2b7edd891ca56b586e5d452 667 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D172_009045 07721fb7e2b7edd891ca56b586e5d452 667 Gene3D G3DSA:3.30.470.130 1 453 7.8E-198 T 14-10-2018 D172_009045 07721fb7e2b7edd891ca56b586e5d452 667 Pfam PF00364 Biotin-requiring enzyme 599 658 1.4E-11 T 14-10-2018 IPR000089 Biotin/lipoyl attachment D172_009045 07721fb7e2b7edd891ca56b586e5d452 667 SMART SM00878 339 446 1.5E-58 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D172_009045 07721fb7e2b7edd891ca56b586e5d452 667 Pfam PF02785 Biotin carboxylase C-terminal domain 339 446 7.0E-38 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D172_009045 07721fb7e2b7edd891ca56b586e5d452 667 SUPERFAMILY SSF56059 119 331 6.36E-68 T 14-10-2018 D172_009045 07721fb7e2b7edd891ca56b586e5d452 667 SUPERFAMILY SSF51230 587 660 2.22E-18 T 14-10-2018 IPR011053 Single hybrid motif D172_009045 07721fb7e2b7edd891ca56b586e5d452 667 SUPERFAMILY SSF52440 5 117 1.22E-48 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily D172_009045 07721fb7e2b7edd891ca56b586e5d452 667 Gene3D G3DSA:2.40.50.100 594 664 5.6E-17 T 14-10-2018 D172_009045 07721fb7e2b7edd891ca56b586e5d452 667 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 157 171 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D172_009045 07721fb7e2b7edd891ca56b586e5d452 667 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 325 3.0E-76 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 D172_009045 07721fb7e2b7edd891ca56b586e5d452 667 SUPERFAMILY SSF51246 334 448 6.28E-39 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 D172_009045 07721fb7e2b7edd891ca56b586e5d452 667 Pfam PF00289 Biotin carboxylase, N-terminal domain 6 114 1.3E-44 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D172_001825 e1e3f5117b0156e6e4f2b04595cef1f6 391 Pfam PF13378 Enolase C-terminal domain-like 149 380 1.2E-53 T 14-10-2018 IPR029065 Enolase C-terminal domain-like D172_001825 e1e3f5117b0156e6e4f2b04595cef1f6 391 SMART SM00922 146 260 2.0E-18 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal D172_001825 e1e3f5117b0156e6e4f2b04595cef1f6 391 SUPERFAMILY SSF51604 106 384 1.9E-78 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily D172_001825 e1e3f5117b0156e6e4f2b04595cef1f6 391 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 93 118 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 D172_001825 e1e3f5117b0156e6e4f2b04595cef1f6 391 SUPERFAMILY SSF54826 1 123 1.54E-31 T 14-10-2018 D172_001825 e1e3f5117b0156e6e4f2b04595cef1f6 391 Gene3D G3DSA:3.20.20.120 111 372 8.7E-154 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily D172_001825 e1e3f5117b0156e6e4f2b04595cef1f6 391 Gene3D G3DSA:3.30.390.10 19 382 8.7E-154 T 14-10-2018 IPR029017 Enolase-like, N-terminal D172_001825 e1e3f5117b0156e6e4f2b04595cef1f6 391 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 22 118 2.1E-20 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain D172_013765 e41bb5dcf066ceda1e5d5af0702bb449 193 SUPERFAMILY SSF88659 123 186 1.87E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_013765 e41bb5dcf066ceda1e5d5af0702bb449 193 Pfam PF08281 Sigma-70, region 4 134 181 1.3E-17 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_013765 e41bb5dcf066ceda1e5d5af0702bb449 193 Gene3D G3DSA:1.10.1740.10 1 121 7.1E-41 T 14-10-2018 D172_013765 e41bb5dcf066ceda1e5d5af0702bb449 193 Pfam PF04542 Sigma-70 region 2 25 92 1.6E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D172_013765 e41bb5dcf066ceda1e5d5af0702bb449 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 186 8.5E-31 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D172_013765 e41bb5dcf066ceda1e5d5af0702bb449 193 Gene3D G3DSA:1.10.10.10 122 190 1.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_013765 e41bb5dcf066ceda1e5d5af0702bb449 193 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 190 1.8E-97 T 14-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_013765 e41bb5dcf066ceda1e5d5af0702bb449 193 SUPERFAMILY SSF88946 3 107 5.97E-30 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D172_018895 b29c3cbbf15002eeae01a8c9613dc217 539 SMART SM00195 90 229 1.3E-17 T 14-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 D172_018895 b29c3cbbf15002eeae01a8c9613dc217 539 SUPERFAMILY SSF111331 239 537 3.4E-51 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily D172_018895 b29c3cbbf15002eeae01a8c9613dc217 539 SMART SM00404 135 232 0.0079 T 14-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic D172_018895 b29c3cbbf15002eeae01a8c9613dc217 539 SMART SM00046 240 363 2.6E-8 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 D172_018895 b29c3cbbf15002eeae01a8c9613dc217 539 Pfam PF00782 Dual specificity phosphatase, catalytic domain 110 228 2.9E-20 T 14-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 D172_018895 b29c3cbbf15002eeae01a8c9613dc217 539 Gene3D G3DSA:3.40.50.10330 236 365 2.1E-30 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 D172_018895 b29c3cbbf15002eeae01a8c9613dc217 539 SUPERFAMILY SSF52799 89 230 7.89E-32 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like D172_018895 b29c3cbbf15002eeae01a8c9613dc217 539 Gene3D G3DSA:3.90.190.10 75 231 5.9E-29 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like D172_018895 b29c3cbbf15002eeae01a8c9613dc217 539 Pfam PF00781 Diacylglycerol kinase catalytic domain 240 363 2.8E-24 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 D172_018895 b29c3cbbf15002eeae01a8c9613dc217 539 Gene3D G3DSA:2.60.200.40 366 529 1.5E-24 T 14-10-2018 D172_016450 111a1725af465d45b2552180a4023793 438 SMART SM00387 323 433 2.8E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_016450 111a1725af465d45b2552180a4023793 438 SMART SM00304 171 223 3.3E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_016450 111a1725af465d45b2552180a4023793 438 SUPERFAMILY SSF47384 208 281 1.47E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_016450 111a1725af465d45b2552180a4023793 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 411 4.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_016450 111a1725af465d45b2552180a4023793 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 374 4.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_016450 111a1725af465d45b2552180a4023793 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 430 4.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_016450 111a1725af465d45b2552180a4023793 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 388 4.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_016450 111a1725af465d45b2552180a4023793 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 430 1.2E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_016450 111a1725af465d45b2552180a4023793 438 Gene3D G3DSA:1.10.287.130 169 280 7.6E-25 T 14-10-2018 D172_016450 111a1725af465d45b2552180a4023793 438 Gene3D G3DSA:3.30.565.10 288 437 1.7E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_016450 111a1725af465d45b2552180a4023793 438 SUPERFAMILY SSF158472 171 218 2.22E-5 T 14-10-2018 D172_016450 111a1725af465d45b2552180a4023793 438 SMART SM00388 224 284 3.8E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_016450 111a1725af465d45b2552180a4023793 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 278 1.6E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_016450 111a1725af465d45b2552180a4023793 438 SUPERFAMILY SSF55874 289 433 2.88E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_016450 111a1725af465d45b2552180a4023793 438 Pfam PF00672 HAMP domain 171 218 4.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_001320 6288ef6b30be01481ec2c6884eea3050 915 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 168 2.0E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_001320 6288ef6b30be01481ec2c6884eea3050 915 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 46 915 4.4E-192 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_001320 6288ef6b30be01481ec2c6884eea3050 915 SUPERFAMILY SSF56935 43 915 3.85E-83 T 14-10-2018 D172_001320 6288ef6b30be01481ec2c6884eea3050 915 Gene3D G3DSA:2.40.170.20 203 915 6.6E-38 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_001320 6288ef6b30be01481ec2c6884eea3050 915 Gene3D G3DSA:2.170.130.10 40 173 5.8E-16 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_001320 6288ef6b30be01481ec2c6884eea3050 915 Pfam PF00593 TonB dependent receptor 408 897 1.7E-28 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_001225 c2c04e746aee6ebc7168bf2330fa357b 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 261 280 4.8E-7 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_001225 c2c04e746aee6ebc7168bf2330fa357b 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 48 66 4.8E-7 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_001225 c2c04e746aee6ebc7168bf2330fa357b 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 68 80 4.8E-7 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_001225 c2c04e746aee6ebc7168bf2330fa357b 401 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 48 66 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site D172_001225 c2c04e746aee6ebc7168bf2330fa357b 401 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 23 360 4.6E-16 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 D172_001225 c2c04e746aee6ebc7168bf2330fa357b 401 SUPERFAMILY SSF50621 236 388 9.63E-37 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D172_001225 c2c04e746aee6ebc7168bf2330fa357b 401 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 270 1.9E-31 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 D172_001225 c2c04e746aee6ebc7168bf2330fa357b 401 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 213 230 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site D172_001225 c2c04e746aee6ebc7168bf2330fa357b 401 PRINTS PR01182 Ornithine decarboxylase signature 46 73 2.0E-12 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 D172_001225 c2c04e746aee6ebc7168bf2330fa357b 401 PRINTS PR01182 Ornithine decarboxylase signature 347 360 2.0E-12 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 D172_001225 c2c04e746aee6ebc7168bf2330fa357b 401 PRINTS PR01182 Ornithine decarboxylase signature 90 114 2.0E-12 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 D172_001225 c2c04e746aee6ebc7168bf2330fa357b 401 PRINTS PR01182 Ornithine decarboxylase signature 327 337 2.0E-12 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 D172_001225 c2c04e746aee6ebc7168bf2330fa357b 401 Gene3D G3DSA:3.20.20.10 28 273 3.0E-78 T 14-10-2018 IPR029066 PLP-binding barrel D172_001225 c2c04e746aee6ebc7168bf2330fa357b 401 SUPERFAMILY SSF51419 20 273 1.74E-50 T 14-10-2018 IPR029066 PLP-binding barrel D172_001225 c2c04e746aee6ebc7168bf2330fa357b 401 Gene3D G3DSA:2.40.37.10 16 396 3.0E-78 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D172_005830 ede8b52c6540f8c0255c75c15b4976e5 309 Pfam PF03547 Membrane transport protein 3 142 9.3E-9 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 D172_005830 ede8b52c6540f8c0255c75c15b4976e5 309 Pfam PF03547 Membrane transport protein 164 305 2.9E-14 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 D172_009700 fbc08e20b73d014ab4edb82134f550a9 296 Pfam PF12833 Helix-turn-helix domain 33 109 2.1E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_009700 fbc08e20b73d014ab4edb82134f550a9 296 SUPERFAMILY SSF46689 11 61 2.69E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_009700 fbc08e20b73d014ab4edb82134f550a9 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 79 94 3.7E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D172_009700 fbc08e20b73d014ab4edb82134f550a9 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 94 110 3.7E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D172_009700 fbc08e20b73d014ab4edb82134f550a9 296 SUPERFAMILY SSF55136 139 288 2.62E-21 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily D172_009700 fbc08e20b73d014ab4edb82134f550a9 296 SUPERFAMILY SSF46689 64 112 6.27E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_009700 fbc08e20b73d014ab4edb82134f550a9 296 Gene3D G3DSA:1.10.10.60 3 60 9.5E-16 T 14-10-2018 D172_009700 fbc08e20b73d014ab4edb82134f550a9 296 Gene3D G3DSA:1.10.10.60 61 112 2.9E-15 T 14-10-2018 D172_009700 fbc08e20b73d014ab4edb82134f550a9 296 Gene3D G3DSA:3.20.80.10 138 290 1.2E-21 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily D172_009700 fbc08e20b73d014ab4edb82134f550a9 296 SMART SM00871 134 288 1.8E-9 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding D172_009700 fbc08e20b73d014ab4edb82134f550a9 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 64 106 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D172_009700 fbc08e20b73d014ab4edb82134f550a9 296 Pfam PF06445 GyrI-like small molecule binding domain 139 287 4.8E-18 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain D172_009700 fbc08e20b73d014ab4edb82134f550a9 296 SMART SM00342 27 110 9.2E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_012990 c1804aacf67dd0299af4ebec96990c32 375 Pfam PF13609 Gram-negative porin 7 358 2.2E-10 T 14-10-2018 D172_012990 c1804aacf67dd0299af4ebec96990c32 375 SUPERFAMILY SSF56935 21 375 1.22E-31 T 14-10-2018 D172_010400 2ef0e34d3af97ca71755f16ac275e7fd 333 SUPERFAMILY SSF47413 1 59 5.04E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D172_010400 2ef0e34d3af97ca71755f16ac275e7fd 333 Gene3D G3DSA:1.10.260.40 1 57 3.7E-23 T 14-10-2018 D172_010400 2ef0e34d3af97ca71755f16ac275e7fd 333 Gene3D G3DSA:3.40.50.2300 160 289 2.6E-70 T 14-10-2018 D172_010400 2ef0e34d3af97ca71755f16ac275e7fd 333 Pfam PF13377 Periplasmic binding protein-like domain 170 329 2.2E-35 T 14-10-2018 D172_010400 2ef0e34d3af97ca71755f16ac275e7fd 333 SUPERFAMILY SSF53822 61 330 3.99E-79 T 14-10-2018 IPR028082 Periplasmic binding protein-like I D172_010400 2ef0e34d3af97ca71755f16ac275e7fd 333 Gene3D G3DSA:3.40.50.2300 62 305 2.6E-70 T 14-10-2018 D172_010400 2ef0e34d3af97ca71755f16ac275e7fd 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.2E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_010400 2ef0e34d3af97ca71755f16ac275e7fd 333 SMART SM00354 1 71 3.0E-31 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_000640 bf9e54e2ff4d36c6b00aee25aea0b0df 184 Pfam PF01227 GTP cyclohydrolase I 6 182 1.4E-77 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 D172_000640 bf9e54e2ff4d36c6b00aee25aea0b0df 184 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 183 38.526 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 D172_000640 bf9e54e2ff4d36c6b00aee25aea0b0df 184 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 62 78 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 D172_000640 bf9e54e2ff4d36c6b00aee25aea0b0df 184 SUPERFAMILY SSF55620 3 183 1.26E-78 T 14-10-2018 D172_000640 bf9e54e2ff4d36c6b00aee25aea0b0df 184 Gene3D G3DSA:3.30.1130.10 53 184 1.0E-62 T 14-10-2018 D172_000640 bf9e54e2ff4d36c6b00aee25aea0b0df 184 Gene3D G3DSA:1.10.286.10 2 51 3.8E-20 T 14-10-2018 D172_000640 bf9e54e2ff4d36c6b00aee25aea0b0df 184 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 7 183 2.6E-76 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 D172_014155 7697985a4e3b982df798f820a5b9544f 187 PIRSF PIRSF004682 1 187 1.1E-64 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 D172_014155 7697985a4e3b982df798f820a5b9544f 187 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 8 158 3.1E-40 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 D172_014155 7697985a4e3b982df798f820a5b9544f 187 Gene3D G3DSA:3.40.50.1000 3 187 6.2E-62 T 14-10-2018 IPR023214 HAD superfamily D172_014155 7697985a4e3b982df798f820a5b9544f 187 Pfam PF13242 HAD-hyrolase-like 111 179 3.9E-13 T 14-10-2018 D172_014155 7697985a4e3b982df798f820a5b9544f 187 SUPERFAMILY SSF56784 3 185 5.02E-50 T 14-10-2018 IPR036412 HAD-like superfamily D172_014155 7697985a4e3b982df798f820a5b9544f 187 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 7 182 1.0E-64 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 D172_014155 7697985a4e3b982df798f820a5b9544f 187 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 8 158 6.1E-35 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 D172_015755 ba7e7e6d30513825f06ac81c53956cbd 680 SUPERFAMILY SSF56436 446 679 1.06E-65 T 14-10-2018 IPR016187 C-type lectin fold D172_015755 ba7e7e6d30513825f06ac81c53956cbd 680 Pfam PF03781 Sulfatase-modifying factor enzyme 1 445 678 1.0E-55 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 D172_015755 ba7e7e6d30513825f06ac81c53956cbd 680 Gene3D G3DSA:3.90.1580.10 430 680 2.6E-62 T 14-10-2018 D172_015755 ba7e7e6d30513825f06ac81c53956cbd 680 Pfam PF08308 PEGA domain 347 409 5.6E-13 T 14-10-2018 IPR013229 PEGA D172_018250 b347412ab55558b05089021b981c3772 634 SMART SM00028 202 235 68.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_018250 b347412ab55558b05089021b981c3772 634 SMART SM00028 242 275 18.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_018250 b347412ab55558b05089021b981c3772 634 SMART SM00028 282 315 74.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_018250 b347412ab55558b05089021b981c3772 634 SUPERFAMILY SSF55073 481 633 6.98E-33 T 14-10-2018 IPR029787 Nucleotide cyclase D172_018250 b347412ab55558b05089021b981c3772 634 SMART SM00267 465 634 9.6E-36 T 14-10-2018 IPR000160 GGDEF domain D172_018250 b347412ab55558b05089021b981c3772 634 Gene3D G3DSA:1.25.40.10 151 452 7.5E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_018250 b347412ab55558b05089021b981c3772 634 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 475 633 3.3E-31 T 14-10-2018 IPR000160 GGDEF domain D172_018250 b347412ab55558b05089021b981c3772 634 Gene3D G3DSA:3.30.70.270 463 634 2.3E-38 T 14-10-2018 D172_018250 b347412ab55558b05089021b981c3772 634 Pfam PF00990 Diguanylate cyclase, GGDEF domain 477 630 3.5E-29 T 14-10-2018 IPR000160 GGDEF domain D172_018250 b347412ab55558b05089021b981c3772 634 SUPERFAMILY SSF48452 190 389 1.9E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 SMART SM01097 3 133 2.6E-93 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 Pfam PF00117 Glutamine amidotransferase class-I 196 371 1.3E-47 T 14-10-2018 IPR017926 Glutamine amidotransferase D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 348 361 2.5E-11 T 14-10-2018 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 2.5E-11 T 14-10-2018 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 2.5E-11 T 14-10-2018 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 SUPERFAMILY SSF52021 4 142 1.16E-57 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 Gene3D G3DSA:3.40.50.880 152 376 1.1E-73 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 Gene3D G3DSA:3.50.30.20 2 151 9.2E-61 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 SUPERFAMILY SSF52317 153 376 7.1E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 PRINTS PR00097 Anthranilate synthase component II signature 235 244 8.7E-6 T 14-10-2018 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 PRINTS PR00097 Anthranilate synthase component II signature 348 361 8.7E-6 T 14-10-2018 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 PRINTS PR00097 Anthranilate synthase component II signature 263 274 8.7E-6 T 14-10-2018 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 1.5E-39 T 14-10-2018 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 1.5E-39 T 14-10-2018 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 1.5E-39 T 14-10-2018 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 1.5E-39 T 14-10-2018 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 1.5E-39 T 14-10-2018 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 377 48.615 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 3.5E-53 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010870 c0ee7120b3569eb6d609c8ff29b77843 378 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 374 2.6E-149 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_010730 f40ee0e1c269fe9880e48e29950581f9 326 Gene3D G3DSA:3.40.50.720 103 294 3.3E-127 T 14-10-2018 D172_010730 f40ee0e1c269fe9880e48e29950581f9 326 SUPERFAMILY SSF52283 2 136 1.21E-40 T 14-10-2018 D172_010730 f40ee0e1c269fe9880e48e29950581f9 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 294 1.7E-52 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 D172_010730 f40ee0e1c269fe9880e48e29950581f9 326 SUPERFAMILY SSF51735 103 295 7.89E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_010730 f40ee0e1c269fe9880e48e29950581f9 326 Gene3D G3DSA:3.40.50.720 3 312 3.3E-127 T 14-10-2018 D172_010730 f40ee0e1c269fe9880e48e29950581f9 326 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 220 236 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site D172_010730 f40ee0e1c269fe9880e48e29950581f9 326 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 191 213 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site D172_010730 f40ee0e1c269fe9880e48e29950581f9 326 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 D172_010730 f40ee0e1c269fe9880e48e29950581f9 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 325 1.6E-30 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 PIRSF PIRSF004557 6 440 3.6E-125 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 SUPERFAMILY SSF103491 13 423 4.05E-132 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 Gene3D G3DSA:1.10.3370.10 9 428 1.9E-158 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 Pfam PF00344 SecY translocase 75 416 6.8E-115 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 177 200 4.1E-94 T 14-10-2018 D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 4.1E-94 T 14-10-2018 D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 4.1E-94 T 14-10-2018 D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 151 176 4.1E-94 T 14-10-2018 D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 401 419 4.1E-94 T 14-10-2018 D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 369 387 4.1E-94 T 14-10-2018 D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 314 336 4.1E-94 T 14-10-2018 D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 22 40 4.1E-94 T 14-10-2018 D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 PRINTS PR00303 Preprotein translocase SecY subunit signature 269 288 4.1E-94 T 14-10-2018 D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 ProSitePatterns PS00756 Protein secY signature 2. 170 187 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 432 28.8 T 14-10-2018 IPR026593 Protein translocase subunit SecY D172_016215 3a2941207d3e837ba4e648c1a2307b39 442 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 19 428 1.0E-131 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 D172_002450 31e9a48dd5b60beaf51aab4b485989b5 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site D172_002450 31e9a48dd5b60beaf51aab4b485989b5 224 Pfam PF04002 RadC-like JAB domain 103 223 1.9E-47 T 14-10-2018 IPR025657 RadC-like JAB domain D172_002450 31e9a48dd5b60beaf51aab4b485989b5 224 SUPERFAMILY SSF47781 19 90 5.93E-11 T 14-10-2018 IPR010994 RuvA domain 2-like D172_002450 31e9a48dd5b60beaf51aab4b485989b5 224 Gene3D G3DSA:3.40.140.10 100 224 2.5E-46 T 14-10-2018 D172_002450 31e9a48dd5b60beaf51aab4b485989b5 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 8.5E-78 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 D172_002450 31e9a48dd5b60beaf51aab4b485989b5 224 SUPERFAMILY SSF102712 149 195 5.1E-5 T 14-10-2018 D172_013710 d65674e9bea9e5db2837df2ad83f2bc9 441 Gene3D G3DSA:3.40.50.150 88 435 4.5E-97 T 14-10-2018 D172_013710 d65674e9bea9e5db2837df2ad83f2bc9 441 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 98 440 5.9E-27 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 D172_013710 d65674e9bea9e5db2837df2ad83f2bc9 441 SUPERFAMILY SSF53335 76 440 8.93E-69 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_013710 d65674e9bea9e5db2837df2ad83f2bc9 441 Gene3D G3DSA:3.40.1350.30 135 273 4.5E-97 T 14-10-2018 D172_013710 d65674e9bea9e5db2837df2ad83f2bc9 441 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 423 433 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site D172_013710 d65674e9bea9e5db2837df2ad83f2bc9 441 Gene3D G3DSA:2.40.50.140 1 87 1.6E-28 T 14-10-2018 D172_013710 d65674e9bea9e5db2837df2ad83f2bc9 441 SUPERFAMILY SSF50249 6 65 3.26E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_013710 d65674e9bea9e5db2837df2ad83f2bc9 441 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 441 58.855 T 14-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 D172_013710 d65674e9bea9e5db2837df2ad83f2bc9 441 Pfam PF01938 TRAM domain 21 62 2.3E-6 T 14-10-2018 IPR002792 TRAM domain D172_013710 d65674e9bea9e5db2837df2ad83f2bc9 441 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 433 4.3E-104 T 14-10-2018 D172_013710 d65674e9bea9e5db2837df2ad83f2bc9 441 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 372 402 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site D172_009140 4843db255dec6519b86b91b830dc3e63 442 Pfam PF00270 DEAD/DEAH box helicase 25 195 5.3E-49 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D172_009140 4843db255dec6519b86b91b830dc3e63 442 Gene3D G3DSA:3.40.50.300 1 211 8.0E-70 T 14-10-2018 D172_009140 4843db255dec6519b86b91b830dc3e63 442 Pfam PF00271 Helicase conserved C-terminal domain 235 341 7.8E-29 T 14-10-2018 IPR001650 Helicase, C-terminal D172_009140 4843db255dec6519b86b91b830dc3e63 442 SMART SM00490 260 341 2.9E-29 T 14-10-2018 IPR001650 Helicase, C-terminal D172_009140 4843db255dec6519b86b91b830dc3e63 442 SUPERFAMILY SSF52540 33 353 5.73E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_009140 4843db255dec6519b86b91b830dc3e63 442 Gene3D G3DSA:3.40.50.300 214 426 3.7E-48 T 14-10-2018 D172_009140 4843db255dec6519b86b91b830dc3e63 442 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D172_009140 4843db255dec6519b86b91b830dc3e63 442 SMART SM00487 20 223 1.0E-52 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_005295 01a3a53132810444673807767ea63bd1 280 SUPERFAMILY SSF56091 28 198 3.6E-36 T 14-10-2018 D172_005295 01a3a53132810444673807767ea63bd1 280 Pfam PF01068 ATP dependent DNA ligase domain 39 198 1.5E-7 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 D172_005295 01a3a53132810444673807767ea63bd1 280 Gene3D G3DSA:2.40.50.140 212 280 2.6E-9 T 14-10-2018 D172_005295 01a3a53132810444673807767ea63bd1 280 Pfam PF14743 DNA ligase OB-like domain 212 277 3.2E-29 T 14-10-2018 IPR029319 DNA ligase, OB-like domain D172_005295 01a3a53132810444673807767ea63bd1 280 Gene3D G3DSA:3.30.1490.70 35 190 2.4E-53 T 14-10-2018 D172_005295 01a3a53132810444673807767ea63bd1 280 SUPERFAMILY SSF50249 172 277 1.94E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_005295 01a3a53132810444673807767ea63bd1 280 Gene3D G3DSA:3.30.470.30 51 151 2.4E-53 T 14-10-2018 D172_015875 7ba73102245a485756563c00dc37871c 781 Gene3D G3DSA:1.20.120.1320 42 135 8.8E-69 T 14-10-2018 D172_015875 7ba73102245a485756563c00dc37871c 781 SUPERFAMILY SSF53633 5 285 2.23E-55 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D172_015875 7ba73102245a485756563c00dc37871c 781 SUPERFAMILY SSF51735 426 597 2.36E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_015875 7ba73102245a485756563c00dc37871c 781 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 5 307 1.1E-62 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_015875 7ba73102245a485756563c00dc37871c 781 Gene3D G3DSA:3.40.1160.10 5 281 8.8E-69 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D172_015875 7ba73102245a485756563c00dc37871c 781 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 434 566 2.0E-12 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 D172_015875 7ba73102245a485756563c00dc37871c 781 SUPERFAMILY SSF55347 575 761 4.9E-41 T 14-10-2018 D172_015875 7ba73102245a485756563c00dc37871c 781 Pfam PF00696 Amino acid kinase family 5 271 2.5E-41 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D172_015875 7ba73102245a485756563c00dc37871c 781 Pfam PF00742 Homoserine dehydrogenase 576 773 8.4E-42 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 D172_015875 7ba73102245a485756563c00dc37871c 781 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 621 643 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 D172_015875 7ba73102245a485756563c00dc37871c 781 PIRSF PIRSF000727 3 378 1.4E-74 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_015875 7ba73102245a485756563c00dc37871c 781 PIRSF PIRSF000727 380 780 1.7E-124 T 14-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_015875 7ba73102245a485756563c00dc37871c 781 Gene3D G3DSA:3.40.50.720 428 774 3.1E-106 T 14-10-2018 D172_015875 7ba73102245a485756563c00dc37871c 781 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_015875 7ba73102245a485756563c00dc37871c 781 Gene3D G3DSA:3.30.360.10 586 759 3.1E-106 T 14-10-2018 D172_006325 8fc07f8b1fecca9995e489bcf951ee22 302 SUPERFAMILY SSF52540 3 218 1.28E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006325 8fc07f8b1fecca9995e489bcf951ee22 302 Gene3D G3DSA:3.40.50.300 2 300 5.5E-60 T 14-10-2018 D172_006325 8fc07f8b1fecca9995e489bcf951ee22 302 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_006325 8fc07f8b1fecca9995e489bcf951ee22 302 Pfam PF00005 ABC transporter 20 162 3.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_006325 8fc07f8b1fecca9995e489bcf951ee22 302 SMART SM00382 29 208 2.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_000565 50849a16c28a445fad8bf4a785a9c824 262 SUPERFAMILY SSF54506 1 262 4.01E-67 T 14-10-2018 D172_000565 50849a16c28a445fad8bf4a785a9c824 262 Gene3D G3DSA:3.10.310.10 7 258 8.9E-76 T 14-10-2018 D172_000565 50849a16c28a445fad8bf4a785a9c824 262 Gene3D G3DSA:3.10.310.10 118 250 8.9E-76 T 14-10-2018 D172_000565 50849a16c28a445fad8bf4a785a9c824 262 PIRSF PIRSF016184 1 262 8.8E-42 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 D172_000565 50849a16c28a445fad8bf4a785a9c824 262 Pfam PF02567 Phenazine biosynthesis-like protein 8 258 4.6E-46 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 D172_000565 50849a16c28a445fad8bf4a785a9c824 262 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 104 2.2E-24 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 D172_013875 10642dc4314198a90958a924f2fed6cc 350 Gene3D G3DSA:2.40.30.170 58 278 1.8E-65 T 14-10-2018 D172_013875 10642dc4314198a90958a924f2fed6cc 350 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 348 4.7E-77 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D172_013875 10642dc4314198a90958a924f2fed6cc 350 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 268 1.3E-31 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D172_013875 10642dc4314198a90958a924f2fed6cc 350 Gene3D G3DSA:2.40.50.100 68 196 1.8E-65 T 14-10-2018 D172_013875 10642dc4314198a90958a924f2fed6cc 350 SUPERFAMILY SSF111369 57 274 4.05E-36 T 14-10-2018 D172_013875 10642dc4314198a90958a924f2fed6cc 350 Gene3D G3DSA:2.40.420.20 279 346 1.8E-65 T 14-10-2018 D172_013875 10642dc4314198a90958a924f2fed6cc 350 Gene3D G3DSA:1.10.287.470 103 162 1.8E-65 T 14-10-2018 D172_020035 d724975efa25a1135cee91bd17cee71d 139 SUPERFAMILY SSF46785 9 139 3.41E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_020035 d724975efa25a1135cee91bd17cee71d 139 Gene3D G3DSA:1.10.10.10 2 139 5.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_020035 d724975efa25a1135cee91bd17cee71d 139 Pfam PF01047 MarR family 32 88 1.0E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_020035 d724975efa25a1135cee91bd17cee71d 139 SMART SM00347 24 124 1.9E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_002395 6b76d00862c4125c72ba372ca9eef9dc 155 Gene3D G3DSA:3.30.1360.40 75 155 8.0E-30 T 14-10-2018 D172_002395 6b76d00862c4125c72ba372ca9eef9dc 155 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 130 3.0E-17 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 D172_002395 6b76d00862c4125c72ba372ca9eef9dc 155 Hamap MF_00173 Arginine repressor [argR]. 1 155 57.852 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 D172_002395 6b76d00862c4125c72ba372ca9eef9dc 155 SUPERFAMILY SSF55252 82 146 3.53E-18 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 D172_002395 6b76d00862c4125c72ba372ca9eef9dc 155 SUPERFAMILY SSF46785 5 76 1.36E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_002395 6b76d00862c4125c72ba372ca9eef9dc 155 Gene3D G3DSA:1.10.10.10 1 74 1.6E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_002395 6b76d00862c4125c72ba372ca9eef9dc 155 PRINTS PR01467 Bacterial arginine repressor signature 90 103 8.0E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 D172_002395 6b76d00862c4125c72ba372ca9eef9dc 155 PRINTS PR01467 Bacterial arginine repressor signature 121 136 8.0E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 D172_002395 6b76d00862c4125c72ba372ca9eef9dc 155 PRINTS PR01467 Bacterial arginine repressor signature 42 57 8.0E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 D172_002395 6b76d00862c4125c72ba372ca9eef9dc 155 PRINTS PR01467 Bacterial arginine repressor signature 25 38 8.0E-24 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 D172_002395 6b76d00862c4125c72ba372ca9eef9dc 155 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 140 4.8E-42 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 D172_002395 6b76d00862c4125c72ba372ca9eef9dc 155 Pfam PF01316 Arginine repressor, DNA binding domain 6 73 3.2E-23 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 D172_002395 6b76d00862c4125c72ba372ca9eef9dc 155 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 3.6E-21 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 D172_012710 fd534f65af4ffb54e82c37d192910cce 265 Gene3D G3DSA:1.10.800.10 1 265 2.7E-103 T 14-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 D172_012710 fd534f65af4ffb54e82c37d192910cce 265 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 10 232 7.9E-47 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 D172_012710 fd534f65af4ffb54e82c37d192910cce 265 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 12 255 7.7E-100 T 14-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 D172_012710 fd534f65af4ffb54e82c37d192910cce 265 SUPERFAMILY SSF56534 5 248 2.75E-99 T 14-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily D172_012710 fd534f65af4ffb54e82c37d192910cce 265 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 210 229 1.6E-8 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 D172_012710 fd534f65af4ffb54e82c37d192910cce 265 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 179 197 1.6E-8 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 D172_012710 fd534f65af4ffb54e82c37d192910cce 265 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 75 97 1.6E-8 T 14-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 D172_012710 fd534f65af4ffb54e82c37d192910cce 265 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 118 129 - T 14-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 D172_014820 d83e6b38fe1323a3b80eef01077b90d1 362 Gene3D G3DSA:3.30.565.10 244 361 5.3E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_014820 d83e6b38fe1323a3b80eef01077b90d1 362 Pfam PF07730 Histidine kinase 178 246 4.6E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 D172_014820 d83e6b38fe1323a3b80eef01077b90d1 362 SUPERFAMILY SSF55874 249 362 1.6E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_014820 d83e6b38fe1323a3b80eef01077b90d1 362 SUPERFAMILY SSF103473 23 163 4.19E-5 T 14-10-2018 IPR036259 MFS transporter superfamily D172_009065 0a2ef10eaf4fc5c48ea3ed496ab5d9af 293 SUPERFAMILY SSF46785 5 89 6.52E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_009065 0a2ef10eaf4fc5c48ea3ed496ab5d9af 293 Gene3D G3DSA:3.40.190.10 159 257 8.8E-31 T 14-10-2018 D172_009065 0a2ef10eaf4fc5c48ea3ed496ab5d9af 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_009065 0a2ef10eaf4fc5c48ea3ed496ab5d9af 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_009065 0a2ef10eaf4fc5c48ea3ed496ab5d9af 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_009065 0a2ef10eaf4fc5c48ea3ed496ab5d9af 293 Gene3D G3DSA:1.10.10.10 3 93 6.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_009065 0a2ef10eaf4fc5c48ea3ed496ab5d9af 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 7.2E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_009065 0a2ef10eaf4fc5c48ea3ed496ab5d9af 293 Pfam PF03466 LysR substrate binding domain 92 287 7.3E-20 T 14-10-2018 IPR005119 LysR, substrate-binding D172_009065 0a2ef10eaf4fc5c48ea3ed496ab5d9af 293 Gene3D G3DSA:3.40.190.10 100 283 8.8E-31 T 14-10-2018 D172_009065 0a2ef10eaf4fc5c48ea3ed496ab5d9af 293 SUPERFAMILY SSF53850 80 289 1.57E-24 T 14-10-2018 D172_008530 50ebefa93ea6ca14e90924a12907ab16 499 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 316 487 2.6E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D172_008530 50ebefa93ea6ca14e90924a12907ab16 499 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 61 236 1.2E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D172_008530 50ebefa93ea6ca14e90924a12907ab16 499 SUPERFAMILY SSF161098 263 487 1.12E-34 T 14-10-2018 IPR035906 MetI-like superfamily D172_008530 50ebefa93ea6ca14e90924a12907ab16 499 SUPERFAMILY SSF161098 5 238 6.73E-40 T 14-10-2018 IPR035906 MetI-like superfamily D172_008530 50ebefa93ea6ca14e90924a12907ab16 499 Gene3D G3DSA:1.10.3720.10 258 496 5.4E-36 T 14-10-2018 IPR035906 MetI-like superfamily D172_008530 50ebefa93ea6ca14e90924a12907ab16 499 Gene3D G3DSA:1.10.3720.10 5 247 7.2E-44 T 14-10-2018 IPR035906 MetI-like superfamily D172_016975 f130e77cad96d73eb73f6cdfd8fc5270 539 Gene3D G3DSA:2.60.40.10 428 539 7.9E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_016975 f130e77cad96d73eb73f6cdfd8fc5270 539 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 49 533 5.2E-190 T 14-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 D172_016975 f130e77cad96d73eb73f6cdfd8fc5270 539 SUPERFAMILY SSF81296 427 536 4.76E-27 T 14-10-2018 IPR014756 Immunoglobulin E-set D172_016975 f130e77cad96d73eb73f6cdfd8fc5270 539 SUPERFAMILY SSF74650 49 418 1.13E-142 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 D172_016975 f130e77cad96d73eb73f6cdfd8fc5270 539 PIRSF PIRSF006281 7 537 1.6E-185 T 14-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD D172_016975 f130e77cad96d73eb73f6cdfd8fc5270 539 Gene3D G3DSA:2.70.98.10 48 427 2.3E-161 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 457 473 1.2E-8 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 336 356 1.2E-8 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 395 406 1.2E-8 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 SMART SM00089 796 873 0.0093 T 14-10-2018 IPR022409 PKD/Chitinase domain D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 SMART SM00089 875 951 3.2E-5 T 14-10-2018 IPR022409 PKD/Chitinase domain D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 SMART SM00089 586 650 0.22 T 14-10-2018 IPR022409 PKD/Chitinase domain D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 SMART SM00089 968 1052 0.37 T 14-10-2018 IPR022409 PKD/Chitinase domain D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 392 520 1.1E-16 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 82 114 2.2E-5 T 14-10-2018 IPR011096 FTP domain D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 Pfam PF00801 PKD domain 986 1028 6.3E-7 T 14-10-2018 IPR000601 PKD domain D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 Pfam PF00801 PKD domain 811 858 3.7E-7 T 14-10-2018 IPR000601 PKD domain D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 Pfam PF00801 PKD domain 898 938 3.9E-6 T 14-10-2018 IPR000601 PKD domain D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 SUPERFAMILY SSF55486 244 556 7.14E-54 T 14-10-2018 D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 Gene3D G3DSA:3.10.170.10 217 382 1.9E-35 T 14-10-2018 D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 249 379 3.3E-19 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 Gene3D G3DSA:2.60.40.10 791 868 1.9E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 SUPERFAMILY SSF49299 879 948 3.4E-12 T 14-10-2018 IPR035986 PKD domain superfamily D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 SUPERFAMILY SSF49299 803 869 7.32E-12 T 14-10-2018 IPR035986 PKD domain superfamily D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 Gene3D G3DSA:1.10.390.10 390 559 1.6E-32 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 Gene3D G3DSA:2.60.40.10 869 954 6.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 SUPERFAMILY SSF49299 973 1031 2.22E-9 T 14-10-2018 IPR035986 PKD domain superfamily D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 SUPERFAMILY SSF49299 592 650 5.89E-11 T 14-10-2018 IPR035986 PKD domain superfamily D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 Gene3D G3DSA:2.60.40.10 960 1039 4.0E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_014110 42d7bd84343d1be4245fae5ebed17e7f 1225 Gene3D G3DSA:2.60.40.10 575 647 1.2E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_005175 69d82aa9ce0cdf47de2457852a95c466 507 SUPERFAMILY SSF48173 187 469 1.83E-81 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 D172_005175 69d82aa9ce0cdf47de2457852a95c466 507 Pfam PF03441 FAD binding domain of DNA photolyase 265 465 4.0E-56 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 D172_005175 69d82aa9ce0cdf47de2457852a95c466 507 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 317 329 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal D172_005175 69d82aa9ce0cdf47de2457852a95c466 507 Gene3D G3DSA:1.25.40.80 136 279 1.2E-18 T 14-10-2018 D172_005175 69d82aa9ce0cdf47de2457852a95c466 507 Pfam PF00875 DNA photolyase 5 130 8.1E-17 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 D172_005175 69d82aa9ce0cdf47de2457852a95c466 507 Gene3D G3DSA:1.10.579.10 287 481 2.4E-59 T 14-10-2018 D172_005175 69d82aa9ce0cdf47de2457852a95c466 507 SUPERFAMILY SSF52425 2 175 4.58E-39 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 D172_005175 69d82aa9ce0cdf47de2457852a95c466 507 PRINTS PR00147 DNA photolyase signature 337 355 5.2E-6 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 D172_005175 69d82aa9ce0cdf47de2457852a95c466 507 PRINTS PR00147 DNA photolyase signature 317 333 5.2E-6 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 D172_005175 69d82aa9ce0cdf47de2457852a95c466 507 Gene3D G3DSA:3.40.50.620 1 129 4.7E-24 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_004970 2d79bfeb733f77af97de052ff589a0c9 294 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 282 2.5E-84 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 D172_004970 2d79bfeb733f77af97de052ff589a0c9 294 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 284 17.533 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 D172_004970 2d79bfeb733f77af97de052ff589a0c9 294 Gene3D G3DSA:1.10.357.140 13 166 2.5E-16 T 14-10-2018 D172_004970 2d79bfeb733f77af97de052ff589a0c9 294 Pfam PF01040 UbiA prenyltransferase family 18 266 2.5E-52 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 D172_004970 2d79bfeb733f77af97de052ff589a0c9 294 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site D172_008840 80897679a47a268a682ee5921a8506fc 285 Gene3D G3DSA:3.30.479.10 13 146 1.5E-21 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 D172_008840 80897679a47a268a682ee5921a8506fc 285 SUPERFAMILY SSF55620 145 281 3.78E-24 T 14-10-2018 D172_008840 80897679a47a268a682ee5921a8506fc 285 SUPERFAMILY SSF55620 1 152 1.0E-26 T 14-10-2018 D172_008840 80897679a47a268a682ee5921a8506fc 285 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 145 275 2.2E-8 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 D172_008840 80897679a47a268a682ee5921a8506fc 285 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 24 137 5.0E-7 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 D172_008840 80897679a47a268a682ee5921a8506fc 285 Gene3D G3DSA:3.30.479.10 147 283 5.2E-8 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 D172_015260 202ebe5fd9c6e34ce238319d7da3e380 198 Pfam PF02397 Bacterial sugar transferase 2 176 9.4E-67 T 14-10-2018 IPR003362 Bacterial sugar transferase D172_015190 bc34c83e6308f1d6423ae536ce9cb1ca 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 18 341 20.583 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D172_015190 bc34c83e6308f1d6423ae536ce9cb1ca 367 Gene3D G3DSA:3.30.470.20 122 283 2.5E-37 T 14-10-2018 D172_015190 bc34c83e6308f1d6423ae536ce9cb1ca 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 4 365 1.6E-183 T 14-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 D172_015190 bc34c83e6308f1d6423ae536ce9cb1ca 367 Pfam PF01259 SAICAR synthetase 21 294 8.7E-47 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 D172_015190 bc34c83e6308f1d6423ae536ce9cb1ca 367 SUPERFAMILY SSF56104 14 344 3.27E-64 T 14-10-2018 D172_000980 be0825d503d4637b9db9c1280ae999a1 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 290 304 1.0E-6 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 D172_000980 be0825d503d4637b9db9c1280ae999a1 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 318 331 1.0E-6 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 D172_000980 be0825d503d4637b9db9c1280ae999a1 503 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 210 225 1.0E-6 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 D172_000980 be0825d503d4637b9db9c1280ae999a1 503 Pfam PF01078 Magnesium chelatase, subunit ChlI 191 390 1.7E-87 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain D172_000980 be0825d503d4637b9db9c1280ae999a1 503 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 8.7E-44 T 14-10-2018 D172_000980 be0825d503d4637b9db9c1280ae999a1 503 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 491 8.1E-182 T 14-10-2018 IPR004482 Mg chelatase-related protein D172_000980 be0825d503d4637b9db9c1280ae999a1 503 SMART SM00382 211 389 9.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_000980 be0825d503d4637b9db9c1280ae999a1 503 SUPERFAMILY SSF52540 191 499 1.49E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_000980 be0825d503d4637b9db9c1280ae999a1 503 SUPERFAMILY SSF54211 8 169 1.21E-29 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_000980 be0825d503d4637b9db9c1280ae999a1 503 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 491 9.1E-26 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain D172_000980 be0825d503d4637b9db9c1280ae999a1 503 Gene3D G3DSA:3.30.230.10 22 169 9.8E-8 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D172_000980 be0825d503d4637b9db9c1280ae999a1 503 Gene3D G3DSA:3.40.50.300 192 495 5.8E-52 T 14-10-2018 D172_000740 3d5aa95d9da5c07e5b50a96c035fd2c7 314 SUPERFAMILY SSF47823 19 104 2.35E-8 T 14-10-2018 D172_000740 3d5aa95d9da5c07e5b50a96c035fd2c7 314 Pfam PF00589 Phage integrase family 127 295 5.3E-49 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D172_000740 3d5aa95d9da5c07e5b50a96c035fd2c7 314 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 21 100 3.7E-13 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D172_000740 3d5aa95d9da5c07e5b50a96c035fd2c7 314 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 17 309 53.076 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD D172_000740 3d5aa95d9da5c07e5b50a96c035fd2c7 314 SUPERFAMILY SSF56349 122 307 6.18E-51 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D172_000740 3d5aa95d9da5c07e5b50a96c035fd2c7 314 Gene3D G3DSA:1.10.443.10 126 303 5.0E-57 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D172_000740 3d5aa95d9da5c07e5b50a96c035fd2c7 314 Gene3D G3DSA:1.10.150.130 17 111 8.5E-14 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 Gene3D G3DSA:3.30.450.350 265 470 4.4E-16 T 14-10-2018 D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 749 762 3.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 708 718 3.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 690 704 3.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 725 743 3.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 SUPERFAMILY SSF52172 783 901 1.85E-33 T 14-10-2018 IPR011006 CheY-like superfamily D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 Gene3D G3DSA:1.10.287.130 504 600 1.3E-26 T 14-10-2018 D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 Gene3D G3DSA:3.40.50.2300 769 903 1.3E-35 T 14-10-2018 D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 SMART SM01079 261 441 3.1E-32 T 14-10-2018 IPR006189 CHASE domain D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 SUPERFAMILY SSF47384 523 603 2.16E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 SMART SM00388 537 602 2.2E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 Pfam PF03924 CHASE domain 264 431 3.3E-24 T 14-10-2018 IPR006189 CHASE domain D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 SUPERFAMILY SSF55874 591 763 3.67E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 649 764 6.4E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 Pfam PF00512 His Kinase A (phospho-acceptor) domain 537 601 7.7E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 SMART SM00448 784 897 3.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 Pfam PF00072 Response regulator receiver domain 786 895 8.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 Pfam PF05231 MASE1 19 187 1.3E-19 T 14-10-2018 IPR007895 MASE1 D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 Gene3D G3DSA:3.30.565.10 603 768 1.9E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_017150 88ca67963e8f2afd816cb5623c97d54f 906 SMART SM00387 649 765 9.5E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_001045 c6a1c23f5a9e028f6b99b19cf5ade70d 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 4 201 34.322 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001045 c6a1c23f5a9e028f6b99b19cf5ade70d 201 Gene3D G3DSA:3.40.1370.10 5 201 2.7E-69 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 D172_001045 c6a1c23f5a9e028f6b99b19cf5ade70d 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 2.8E-76 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001045 c6a1c23f5a9e028f6b99b19cf5ade70d 201 SUPERFAMILY SSF52166 9 200 6.02E-73 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 D172_001045 c6a1c23f5a9e028f6b99b19cf5ade70d 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 1.3E-65 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 D172_019335 8f77203bfd15e5cb741a052320526d2b 514 Gene3D G3DSA:1.10.275.10 6 202 3.3E-55 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal D172_019335 8f77203bfd15e5cb741a052320526d2b 514 SUPERFAMILY SSF48557 4 510 2.2E-166 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 D172_019335 8f77203bfd15e5cb741a052320526d2b 514 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 144 160 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 D172_019335 8f77203bfd15e5cb741a052320526d2b 514 Gene3D G3DSA:1.20.200.10 203 508 7.9E-100 T 14-10-2018 D172_019335 8f77203bfd15e5cb741a052320526d2b 514 Pfam PF00221 Aromatic amino acid lyase 14 471 3.0E-157 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 D172_007185 3b65b5e65d7204c29ebfc71eacecde0e 323 SMART SM00729 11 215 8.1E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D172_007185 3b65b5e65d7204c29ebfc71eacecde0e 323 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 323 2.5E-101 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D172_007185 3b65b5e65d7204c29ebfc71eacecde0e 323 Gene3D G3DSA:3.20.20.70 1 323 2.6E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_007185 3b65b5e65d7204c29ebfc71eacecde0e 323 Pfam PF13353 4Fe-4S single cluster domain 20 120 5.7E-8 T 14-10-2018 D172_007185 3b65b5e65d7204c29ebfc71eacecde0e 323 Pfam PF04055 Radical SAM superfamily 16 176 1.4E-22 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D172_007185 3b65b5e65d7204c29ebfc71eacecde0e 323 Pfam PF06463 Molybdenum Cofactor Synthesis C 182 306 8.0E-36 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D172_007185 3b65b5e65d7204c29ebfc71eacecde0e 323 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 2 323 35.421 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D172_007185 3b65b5e65d7204c29ebfc71eacecde0e 323 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D172_007185 3b65b5e65d7204c29ebfc71eacecde0e 323 SUPERFAMILY SSF102114 3 276 6.54E-70 T 14-10-2018 D172_012380 6f451bec6e3e1b151c5a75a7489bc1b2 930 Pfam PF13244 Domain of unknown function (DUF4040) 609 674 5.3E-19 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 D172_012380 6f451bec6e3e1b151c5a75a7489bc1b2 930 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 150 171 3.5E-39 T 14-10-2018 D172_012380 6f451bec6e3e1b151c5a75a7489bc1b2 930 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 3.5E-39 T 14-10-2018 D172_012380 6f451bec6e3e1b151c5a75a7489bc1b2 930 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 3.5E-39 T 14-10-2018 D172_012380 6f451bec6e3e1b151c5a75a7489bc1b2 930 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 3.5E-39 T 14-10-2018 D172_012380 6f451bec6e3e1b151c5a75a7489bc1b2 930 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 3.5E-39 T 14-10-2018 D172_012380 6f451bec6e3e1b151c5a75a7489bc1b2 930 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 3.5E-39 T 14-10-2018 D172_012380 6f451bec6e3e1b151c5a75a7489bc1b2 930 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 3.5E-39 T 14-10-2018 D172_012380 6f451bec6e3e1b151c5a75a7489bc1b2 930 Pfam PF00361 Proton-conducting membrane transporter 126 402 2.5E-64 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_012380 6f451bec6e3e1b151c5a75a7489bc1b2 930 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 789 910 4.6E-34 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein D172_012380 6f451bec6e3e1b151c5a75a7489bc1b2 930 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 61 113 1.5E-9 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_016710 f7fd3e528c18ed98f6b329e5d11fe98e 207 Gene3D G3DSA:1.10.357.10 54 206 3.5E-36 T 14-10-2018 D172_016710 f7fd3e528c18ed98f6b329e5d11fe98e 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 59 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site D172_016710 f7fd3e528c18ed98f6b329e5d11fe98e 207 SUPERFAMILY SSF46689 3 78 4.85E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_016710 f7fd3e528c18ed98f6b329e5d11fe98e 207 Gene3D G3DSA:1.10.10.60 1 53 3.8E-24 T 14-10-2018 D172_016710 f7fd3e528c18ed98f6b329e5d11fe98e 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 59 3.0E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_014825 00aeef4a75090f9fc45aa5bca9990e17 288 SUPERFAMILY SSF103481 38 137 5.75E-9 T 14-10-2018 D172_014825 00aeef4a75090f9fc45aa5bca9990e17 288 Pfam PF00892 EamA-like transporter family 9 137 1.4E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_014825 00aeef4a75090f9fc45aa5bca9990e17 288 Pfam PF00892 EamA-like transporter family 148 276 8.2E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_014825 00aeef4a75090f9fc45aa5bca9990e17 288 SUPERFAMILY SSF103481 183 277 1.7E-13 T 14-10-2018 D172_019595 1a20286a649f59733dd0d9cae89a465f 192 SUPERFAMILY SSF88697 4 188 1.59E-34 T 14-10-2018 IPR015947 PUA-like superfamily D172_019595 1a20286a649f59733dd0d9cae89a465f 192 Gene3D G3DSA:2.30.130.40 1 105 3.9E-18 T 14-10-2018 D172_019595 1a20286a649f59733dd0d9cae89a465f 192 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 6 178 1.3E-7 T 14-10-2018 IPR003111 Lon, substrate-binding domain D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 Gene3D G3DSA:1.10.274.100 490 640 2.4E-42 T 14-10-2018 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 381 1.7E-7 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 Pfam PF00623 RNA polymerase Rpb1, domain 2 388 485 9.0E-28 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 7.4E-18 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 1.1E-29 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.4E-85 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1362 18.93 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 Gene3D G3DSA:1.10.132.30 641 790 1.5E-64 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 Gene3D G3DSA:2.40.50.100 1023 1112 2.5E-11 T 14-10-2018 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1300 7.1E-78 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 SUPERFAMILY SSF64484 16 1350 0.0 T 14-10-2018 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 Gene3D G3DSA:1.10.150.390 1301 1363 8.2E-29 T 14-10-2018 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1352 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 Gene3D G3DSA:1.10.40.90 374 416 1.9E-22 T 14-10-2018 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 Gene3D G3DSA:1.10.1790.20 1121 1299 2.8E-61 T 14-10-2018 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 Gene3D G3DSA:2.40.50.100 1137 1200 2.8E-61 T 14-10-2018 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 Gene3D G3DSA:2.40.50.100 948 1022 1.1E-25 T 14-10-2018 D172_001625 0fa6a9c46b2d70cfc44537d7cc672b72 1391 SMART SM00663 235 514 9.8E-185 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_014230 d22062a69d05a7b233f4afcd2aa4ffe9 168 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 11 152 45.187 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 D172_014230 d22062a69d05a7b233f4afcd2aa4ffe9 168 Pfam PF14437 MafB19-like deaminase 6 152 1.7E-34 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 D172_014230 d22062a69d05a7b233f4afcd2aa4ffe9 168 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 93 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 D172_014230 d22062a69d05a7b233f4afcd2aa4ffe9 168 SUPERFAMILY SSF53927 4 156 2.51E-56 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 D172_014230 d22062a69d05a7b233f4afcd2aa4ffe9 168 Gene3D G3DSA:3.40.140.10 2 166 2.8E-60 T 14-10-2018 D172_006805 b47c6dfa90b3286d47013d784869a545 682 Gene3D G3DSA:3.40.50.300 434 558 2.9E-18 T 14-10-2018 D172_006805 b47c6dfa90b3286d47013d784869a545 682 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 61 678 46.93 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 D172_006805 b47c6dfa90b3286d47013d784869a545 682 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 53 680 3.9E-161 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 D172_006805 b47c6dfa90b3286d47013d784869a545 682 Pfam PF13538 UvrD-like helicase C-terminal domain 607 653 2.2E-14 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain D172_006805 b47c6dfa90b3286d47013d784869a545 682 Gene3D G3DSA:3.40.50.300 559 670 9.2E-17 T 14-10-2018 D172_006805 b47c6dfa90b3286d47013d784869a545 682 SUPERFAMILY SSF52540 213 661 2.47E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006805 b47c6dfa90b3286d47013d784869a545 682 Pfam PF13245 AAA domain 218 367 4.4E-32 T 14-10-2018 D172_006805 b47c6dfa90b3286d47013d784869a545 682 Gene3D G3DSA:3.40.50.300 170 424 1.1E-67 T 14-10-2018 D172_006805 b47c6dfa90b3286d47013d784869a545 682 SMART SM00382 225 380 6.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_008240 b0ef3c73a1a67b20f846d1af32629c33 1613 PIRSF PIRSF036761 1 1609 0.0 T 14-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 D172_008240 b0ef3c73a1a67b20f846d1af32629c33 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1602 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 D172_008240 b0ef3c73a1a67b20f846d1af32629c33 1613 SUPERFAMILY SSF51735 945 1233 1.18E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_008240 b0ef3c73a1a67b20f846d1af32629c33 1613 SUPERFAMILY SSF53223 757 956 7.91E-24 T 14-10-2018 D172_020625 8d246c9aac2dc8efcb8176e058c66551 507 SUPERFAMILY SSF103190 70 165 6.28E-9 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily D172_020625 8d246c9aac2dc8efcb8176e058c66551 507 Gene3D G3DSA:3.30.450.20 136 272 1.3E-11 T 14-10-2018 D172_020625 8d246c9aac2dc8efcb8176e058c66551 507 Pfam PF00990 Diguanylate cyclase, GGDEF domain 350 499 6.9E-42 T 14-10-2018 IPR000160 GGDEF domain D172_020625 8d246c9aac2dc8efcb8176e058c66551 507 SUPERFAMILY SSF103190 171 252 4.32E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily D172_020625 8d246c9aac2dc8efcb8176e058c66551 507 SMART SM00267 339 504 5.5E-57 T 14-10-2018 IPR000160 GGDEF domain D172_020625 8d246c9aac2dc8efcb8176e058c66551 507 SUPERFAMILY SSF55073 355 506 7.85E-47 T 14-10-2018 IPR029787 Nucleotide cyclase D172_020625 8d246c9aac2dc8efcb8176e058c66551 507 Gene3D G3DSA:3.30.70.270 344 507 4.8E-53 T 14-10-2018 D172_020625 8d246c9aac2dc8efcb8176e058c66551 507 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 347 503 5.8E-47 T 14-10-2018 IPR000160 GGDEF domain D172_020625 8d246c9aac2dc8efcb8176e058c66551 507 Pfam PF02743 Cache domain 34 252 4.7E-20 T 14-10-2018 IPR033479 Double Cache domain 1 D172_006000 23b0c127a5027daf7d98fe6a7b26f2ea 691 Gene3D G3DSA:3.40.50.300 501 689 4.4E-30 T 14-10-2018 D172_006000 23b0c127a5027daf7d98fe6a7b26f2ea 691 SUPERFAMILY SSF52540 46 663 3.2E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006000 23b0c127a5027daf7d98fe6a7b26f2ea 691 Pfam PF13307 Helicase C-terminal domain 530 684 4.1E-33 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 D172_006000 23b0c127a5027daf7d98fe6a7b26f2ea 691 Pfam PF04851 Type III restriction enzyme, res subunit 24 257 6.6E-6 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 D172_006000 23b0c127a5027daf7d98fe6a7b26f2ea 691 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 34.099 T 14-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 D172_006000 23b0c127a5027daf7d98fe6a7b26f2ea 691 SMART SM00491 539 671 2.9E-32 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 D172_006000 23b0c127a5027daf7d98fe6a7b26f2ea 691 Gene3D G3DSA:3.40.50.300 24 306 2.0E-41 T 14-10-2018 D172_011020 0a63d4f1717adfb259bc7007d130bd9c 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 51.386 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D172_011020 0a63d4f1717adfb259bc7007d130bd9c 214 SUPERFAMILY SSF52540 1 188 5.75E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_011020 0a63d4f1717adfb259bc7007d130bd9c 214 Gene3D G3DSA:3.40.50.300 1 213 9.2E-78 T 14-10-2018 D172_011020 0a63d4f1717adfb259bc7007d130bd9c 214 Pfam PF00406 Adenylate kinase 5 185 4.1E-58 T 14-10-2018 D172_011020 0a63d4f1717adfb259bc7007d130bd9c 214 PRINTS PR00094 Adenylate kinase signature 32 46 3.5E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D172_011020 0a63d4f1717adfb259bc7007d130bd9c 214 PRINTS PR00094 Adenylate kinase signature 81 97 3.5E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D172_011020 0a63d4f1717adfb259bc7007d130bd9c 214 PRINTS PR00094 Adenylate kinase signature 4 17 3.5E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D172_011020 0a63d4f1717adfb259bc7007d130bd9c 214 PRINTS PR00094 Adenylate kinase signature 173 187 3.5E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D172_011020 0a63d4f1717adfb259bc7007d130bd9c 214 PRINTS PR00094 Adenylate kinase signature 156 171 3.5E-36 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D172_011020 0a63d4f1717adfb259bc7007d130bd9c 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.7E-14 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 D172_011020 0a63d4f1717adfb259bc7007d130bd9c 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 209 1.3E-74 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 D172_011020 0a63d4f1717adfb259bc7007d130bd9c 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 D172_012725 47b74bfd1266787a703da48efa37b204 472 SUPERFAMILY SSF52540 4 55 1.86E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_012725 47b74bfd1266787a703da48efa37b204 472 Pfam PF04317 YcjX-like family, DUF463 29 471 1.1E-162 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein D172_012725 47b74bfd1266787a703da48efa37b204 472 PIRSF PIRSF019381 3 472 1.2E-163 T 14-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein D172_011670 7e3dfd7bc7ec0aafd08456a4576f0b0c 292 Gene3D G3DSA:3.40.50.720 2 164 4.1E-46 T 14-10-2018 D172_011670 7e3dfd7bc7ec0aafd08456a4576f0b0c 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 164 2.4E-40 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 D172_011670 7e3dfd7bc7ec0aafd08456a4576f0b0c 292 Gene3D G3DSA:1.10.1040.10 165 292 8.4E-24 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 D172_011670 7e3dfd7bc7ec0aafd08456a4576f0b0c 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 275 4.7E-17 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 D172_011670 7e3dfd7bc7ec0aafd08456a4576f0b0c 292 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 8 21 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 D172_011670 7e3dfd7bc7ec0aafd08456a4576f0b0c 292 SUPERFAMILY SSF48179 165 290 8.84E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_011670 7e3dfd7bc7ec0aafd08456a4576f0b0c 292 PIRSF PIRSF000103 2 292 3.1E-68 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 D172_011670 7e3dfd7bc7ec0aafd08456a4576f0b0c 292 SUPERFAMILY SSF51735 6 165 1.89E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_018700 8f0ecad6814908db2503094da2d9b6d4 203 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 2.3E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_018700 8f0ecad6814908db2503094da2d9b6d4 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 2.3E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_018700 8f0ecad6814908db2503094da2d9b6d4 203 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 2.3E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_018700 8f0ecad6814908db2503094da2d9b6d4 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.3E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_018700 8f0ecad6814908db2503094da2d9b6d4 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.3E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_018700 8f0ecad6814908db2503094da2d9b6d4 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 89 1.4E-27 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_018700 8f0ecad6814908db2503094da2d9b6d4 203 Gene3D G3DSA:2.40.500.20 90 203 5.2E-46 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_018700 8f0ecad6814908db2503094da2d9b6d4 203 SUPERFAMILY SSF46609 1 90 2.62E-31 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_018700 8f0ecad6814908db2503094da2d9b6d4 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_018700 8f0ecad6814908db2503094da2d9b6d4 203 SUPERFAMILY SSF54719 88 201 2.36E-44 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_018700 8f0ecad6814908db2503094da2d9b6d4 203 PIRSF PIRSF000349 1 203 4.9E-78 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_018700 8f0ecad6814908db2503094da2d9b6d4 203 Gene3D G3DSA:1.10.287.990 20 89 7.5E-24 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_018700 8f0ecad6814908db2503094da2d9b6d4 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 1.4E-39 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_013450 c189a70d7127fafd928194019e21f9e6 198 SUPERFAMILY SSF48150 7 192 8.63E-78 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 D172_013450 c189a70d7127fafd928194019e21f9e6 198 Gene3D G3DSA:1.10.340.30 7 192 5.0E-82 T 14-10-2018 D172_013450 c189a70d7127fafd928194019e21f9e6 198 Pfam PF03352 Methyladenine glycosylase 11 187 7.6E-80 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 Gene3D G3DSA:3.40.50.720 233 366 2.3E-38 T 14-10-2018 D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 5.8E-30 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 5.8E-30 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 5.8E-30 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 5.8E-30 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 5.8E-30 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 Gene3D G3DSA:3.30.70.1450 140 232 2.5E-19 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 SUPERFAMILY SSF116726 361 437 4.19E-9 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 Gene3D G3DSA:3.30.70.1450 367 458 7.1E-29 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 Pfam PF02080 TrkA-C domain 391 437 2.6E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 Pfam PF02080 TrkA-C domain 156 225 3.8E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 Gene3D G3DSA:3.40.50.720 2 139 3.9E-47 T 14-10-2018 D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 SUPERFAMILY SSF51735 1 152 1.7E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 Pfam PF02254 TrkA-N domain 3 111 3.5E-28 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 Pfam PF02254 TrkA-N domain 235 350 6.8E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 SUPERFAMILY SSF51735 233 376 3.95E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_000080 4e1b8b7c481aadca3a8ff1581fb4acee 458 SUPERFAMILY SSF116726 150 226 1.7E-8 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D172_002015 e8579b1a5bdb2a2751cccc75e3405ac8 315 Gene3D G3DSA:1.20.1640.10 98 298 3.8E-13 T 14-10-2018 D172_002015 e8579b1a5bdb2a2751cccc75e3405ac8 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 2.8E-84 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 D172_002015 e8579b1a5bdb2a2751cccc75e3405ac8 315 SUPERFAMILY SSF82866 74 292 3.92E-41 T 14-10-2018 D172_002015 e8579b1a5bdb2a2751cccc75e3405ac8 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.381 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 D172_002015 e8579b1a5bdb2a2751cccc75e3405ac8 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 1.6E-33 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D172_002015 e8579b1a5bdb2a2751cccc75e3405ac8 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 1.6E-33 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D172_002015 e8579b1a5bdb2a2751cccc75e3405ac8 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 1.6E-33 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D172_002015 e8579b1a5bdb2a2751cccc75e3405ac8 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 1.6E-33 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D172_002015 e8579b1a5bdb2a2751cccc75e3405ac8 315 Pfam PF07549 SecD/SecF GG Motif 34 60 2.9E-11 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site D172_002015 e8579b1a5bdb2a2751cccc75e3405ac8 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 117 282 8.9E-55 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D172_002015 e8579b1a5bdb2a2751cccc75e3405ac8 315 Pfam PF02355 Protein export membrane protein 108 293 8.9E-68 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial D172_014465 7ab640b7fce72c9e7d2925f2dbb0700e 391 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014465 7ab640b7fce72c9e7d2925f2dbb0700e 391 Pfam PF00162 Phosphoglycerate kinase 7 378 4.7E-143 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014465 7ab640b7fce72c9e7d2925f2dbb0700e 391 Gene3D G3DSA:3.40.50.1260 8 386 5.3E-153 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014465 7ab640b7fce72c9e7d2925f2dbb0700e 391 PIRSF PIRSF000724 1 391 3.5E-135 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014465 7ab640b7fce72c9e7d2925f2dbb0700e 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 388 39.109 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014465 7ab640b7fce72c9e7d2925f2dbb0700e 391 SUPERFAMILY SSF53748 4 388 1.65E-147 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014465 7ab640b7fce72c9e7d2925f2dbb0700e 391 Gene3D G3DSA:3.40.50.1260 165 378 5.3E-153 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014465 7ab640b7fce72c9e7d2925f2dbb0700e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 6.0E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014465 7ab640b7fce72c9e7d2925f2dbb0700e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 6.0E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014465 7ab640b7fce72c9e7d2925f2dbb0700e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 6.0E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014465 7ab640b7fce72c9e7d2925f2dbb0700e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 6.0E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014465 7ab640b7fce72c9e7d2925f2dbb0700e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 6.0E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014465 7ab640b7fce72c9e7d2925f2dbb0700e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 6.0E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014465 7ab640b7fce72c9e7d2925f2dbb0700e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 6.0E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014465 7ab640b7fce72c9e7d2925f2dbb0700e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 6.0E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_014465 7ab640b7fce72c9e7d2925f2dbb0700e 391 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 6.0E-85 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_007385 ae7dd8bee1078610374cd03ea5c9d84c 336 Gene3D G3DSA:3.40.50.2000 15 324 5.1E-45 T 14-10-2018 D172_007385 ae7dd8bee1078610374cd03ea5c9d84c 336 Gene3D G3DSA:3.40.50.2000 155 320 5.1E-45 T 14-10-2018 D172_007385 ae7dd8bee1078610374cd03ea5c9d84c 336 Pfam PF13439 Glycosyltransferase Family 4 15 145 1.5E-7 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D172_007385 ae7dd8bee1078610374cd03ea5c9d84c 336 SUPERFAMILY SSF53756 11 333 4.32E-48 T 14-10-2018 D172_007385 ae7dd8bee1078610374cd03ea5c9d84c 336 Pfam PF13692 Glycosyl transferases group 1 171 298 1.3E-20 T 14-10-2018 D172_004950 ad1aec006105eb8858495eb2c6bdd612 319 SUPERFAMILY SSF49503 116 279 1.52E-48 T 14-10-2018 IPR008972 Cupredoxin D172_004950 ad1aec006105eb8858495eb2c6bdd612 319 Gene3D G3DSA:1.10.287.90 24 107 1.7E-31 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004950 ad1aec006105eb8858495eb2c6bdd612 319 SUPERFAMILY SSF81464 25 113 1.21E-21 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004950 ad1aec006105eb8858495eb2c6bdd612 319 PIRSF PIRSF000292 2 310 4.9E-129 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 D172_004950 ad1aec006105eb8858495eb2c6bdd612 319 Pfam PF06481 COX Aromatic Rich Motif 239 281 3.8E-18 T 14-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 D172_004950 ad1aec006105eb8858495eb2c6bdd612 319 Gene3D G3DSA:2.60.40.420 108 279 5.6E-57 T 14-10-2018 IPR008972 Cupredoxin D172_004950 ad1aec006105eb8858495eb2c6bdd612 319 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 12 235 9.5E-110 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 D172_008415 fb135773588e6e232baa5630fc8d29c1 350 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 17 340 7.6E-106 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 D172_008415 fb135773588e6e232baa5630fc8d29c1 350 SUPERFAMILY SSF53187 16 343 7.76E-79 T 14-10-2018 D172_008415 fb135773588e6e232baa5630fc8d29c1 350 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 350 144.298 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 D172_008415 fb135773588e6e232baa5630fc8d29c1 350 Gene3D G3DSA:3.40.630.10 12 349 3.0E-114 T 14-10-2018 D172_008415 fb135773588e6e232baa5630fc8d29c1 350 PIRSF PIRSF017020 11 349 3.8E-137 T 14-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 D172_008415 fb135773588e6e232baa5630fc8d29c1 350 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 59 342 2.5E-53 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 D172_003755 3820710d7139200816f3e9558971061f 831 SMART SM00357 87 146 1.6E-10 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 D172_003755 3820710d7139200816f3e9558971061f 831 Gene3D G3DSA:2.40.50.140 641 746 7.0E-22 T 14-10-2018 D172_003755 3820710d7139200816f3e9558971061f 831 Gene3D G3DSA:2.40.50.140 72 147 3.4E-14 T 14-10-2018 D172_003755 3820710d7139200816f3e9558971061f 831 Pfam PF00575 S1 RNA binding domain 638 721 4.4E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 D172_003755 3820710d7139200816f3e9558971061f 831 SUPERFAMILY SSF50249 140 236 1.09E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_003755 3820710d7139200816f3e9558971061f 831 SMART SM00316 638 721 5.0E-18 T 14-10-2018 IPR022967 RNA-binding domain, S1 D172_003755 3820710d7139200816f3e9558971061f 831 Hamap MF_01895 Ribonuclease R [rnr]. 39 721 56.222 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 D172_003755 3820710d7139200816f3e9558971061f 831 SUPERFAMILY SSF50249 639 733 1.3E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_003755 3820710d7139200816f3e9558971061f 831 ProSitePatterns PS01175 Ribonuclease II family signature. 556 580 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site D172_003755 3820710d7139200816f3e9558971061f 831 Pfam PF08461 Ribonuclease R winged-helix domain 24 86 1.4E-4 T 14-10-2018 IPR013668 Ribonuclease R winged-helix domain D172_003755 3820710d7139200816f3e9558971061f 831 SUPERFAMILY SSF50249 221 638 4.8E-146 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_003755 3820710d7139200816f3e9558971061f 831 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 70 720 1.1E-249 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 D172_003755 3820710d7139200816f3e9558971061f 831 TIGRFAM TIGR02063 RNase_R: ribonuclease R 20 720 1.6E-267 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 D172_003755 3820710d7139200816f3e9558971061f 831 Pfam PF08206 Ribonuclease B OB domain 88 145 2.9E-19 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain D172_003755 3820710d7139200816f3e9558971061f 831 SUPERFAMILY SSF50249 68 147 8.92E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_003755 3820710d7139200816f3e9558971061f 831 Pfam PF00773 RNB domain 261 588 1.5E-111 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 D172_003755 3820710d7139200816f3e9558971061f 831 SMART SM00955 261 589 4.1E-183 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 D172_015890 109fe1e555e48ea53d74622f752c56e1 413 SUPERFAMILY SSF51735 162 408 5.77E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_015890 109fe1e555e48ea53d74622f752c56e1 413 Pfam PF00390 Malic enzyme, N-terminal domain 21 115 1.2E-20 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 D172_015890 109fe1e555e48ea53d74622f752c56e1 413 SMART SM01274 17 150 1.2E-72 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 D172_015890 109fe1e555e48ea53d74622f752c56e1 413 SMART SM00919 162 398 2.3E-132 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 D172_015890 109fe1e555e48ea53d74622f752c56e1 413 SUPERFAMILY SSF53223 8 160 2.73E-51 T 14-10-2018 D172_015890 109fe1e555e48ea53d74622f752c56e1 413 Gene3D G3DSA:3.40.50.10380 1 159 2.2E-66 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 D172_015890 109fe1e555e48ea53d74622f752c56e1 413 Pfam PF03949 Malic enzyme, NAD binding domain 164 354 6.7E-25 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 D172_015890 109fe1e555e48ea53d74622f752c56e1 413 ProSitePatterns PS00331 Malic enzymes signature. 158 174 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 D172_015890 109fe1e555e48ea53d74622f752c56e1 413 Gene3D G3DSA:3.40.50.720 160 413 9.2E-80 T 14-10-2018 D172_015890 109fe1e555e48ea53d74622f752c56e1 413 PIRSF PIRSF000106 43 413 7.7E-70 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 D172_008640 3aaa8f5923424356d51e8c3cca45403d 254 SMART SM00382 45 226 4.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_008640 3aaa8f5923424356d51e8c3cca45403d 254 SUPERFAMILY SSF52540 19 234 7.42E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_008640 3aaa8f5923424356d51e8c3cca45403d 254 Gene3D G3DSA:3.40.50.300 7 248 3.5E-58 T 14-10-2018 D172_008640 3aaa8f5923424356d51e8c3cca45403d 254 Pfam PF00005 ABC transporter 36 179 1.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_001605 0bb0c497087966a16c68916f419365cb 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001605 0bb0c497087966a16c68916f419365cb 234 Gene3D G3DSA:3.30.190.20 21 225 6.9E-79 T 14-10-2018 D172_001605 0bb0c497087966a16c68916f419365cb 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.1E-51 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein D172_001605 0bb0c497087966a16c68916f419365cb 234 Gene3D G3DSA:3.40.50.790 68 159 6.9E-79 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich D172_001605 0bb0c497087966a16c68916f419365cb 234 PIRSF PIRSF002155 1 227 7.7E-79 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001605 0bb0c497087966a16c68916f419365cb 234 SUPERFAMILY SSF56808 6 225 1.7E-81 T 14-10-2018 IPR023674 Ribosomal protein L1-like D172_001605 0bb0c497087966a16c68916f419365cb 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.782 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 D172_001605 0bb0c497087966a16c68916f419365cb 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 3.2E-105 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 D172_019195 b401a50b1ebcce3883717e123ad9b9c0 581 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 302 563 7.3E-64 T 14-10-2018 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 D172_019195 b401a50b1ebcce3883717e123ad9b9c0 581 Gene3D G3DSA:3.30.980.20 393 485 6.5E-71 T 14-10-2018 D172_019195 b401a50b1ebcce3883717e123ad9b9c0 581 Pfam PF08282 haloacid dehalogenase-like hydrolase 303 369 2.6E-10 T 14-10-2018 D172_019195 b401a50b1ebcce3883717e123ad9b9c0 581 SUPERFAMILY SSF56784 302 532 6.69E-37 T 14-10-2018 IPR036412 HAD-like superfamily D172_019195 b401a50b1ebcce3883717e123ad9b9c0 581 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 481 547 3.6E-6 T 14-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal D172_019195 b401a50b1ebcce3883717e123ad9b9c0 581 Gene3D G3DSA:3.40.50.1000 302 530 6.5E-71 T 14-10-2018 IPR023214 HAD superfamily D172_019195 b401a50b1ebcce3883717e123ad9b9c0 581 SUPERFAMILY SSF52540 40 240 6.89E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_019195 b401a50b1ebcce3883717e123ad9b9c0 581 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 302 529 3.2E-18 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 D172_019195 b401a50b1ebcce3883717e123ad9b9c0 581 Gene3D G3DSA:3.40.50.300 23 294 6.3E-68 T 14-10-2018 D172_013995 1bdd93171283d7acdcc85ff81a7253bd 222 Pfam PF02390 Putative methyltransferase 56 186 1.1E-12 T 14-10-2018 D172_013995 1bdd93171283d7acdcc85ff81a7253bd 222 SUPERFAMILY SSF53335 44 187 2.79E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_013995 1bdd93171283d7acdcc85ff81a7253bd 222 Gene3D G3DSA:3.40.50.150 24 221 1.5E-29 T 14-10-2018 D172_016475 faa3a422eac931ea831573bd5987c2c4 775 Gene3D G3DSA:1.10.3500.10 111 496 3.5E-156 T 14-10-2018 IPR023323 Tex-like domain superfamily D172_016475 faa3a422eac931ea831573bd5987c2c4 775 Pfam PF09371 Tex-like protein N-terminal domain 9 192 2.1E-65 T 14-10-2018 IPR018974 Tex-like protein, N-terminal D172_016475 faa3a422eac931ea831573bd5987c2c4 775 SUPERFAMILY SSF158832 2 318 1.28E-111 T 14-10-2018 D172_016475 faa3a422eac931ea831573bd5987c2c4 775 Pfam PF00575 S1 RNA binding domain 647 718 7.8E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 D172_016475 faa3a422eac931ea831573bd5987c2c4 775 SMART SM00316 647 718 3.4E-23 T 14-10-2018 IPR022967 RNA-binding domain, S1 D172_016475 faa3a422eac931ea831573bd5987c2c4 775 SMART SM00732 323 422 3.9E-38 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 D172_016475 faa3a422eac931ea831573bd5987c2c4 775 Gene3D G3DSA:1.10.150.310 497 628 8.8E-50 T 14-10-2018 D172_016475 faa3a422eac931ea831573bd5987c2c4 775 SUPERFAMILY SSF47781 468 556 1.33E-27 T 14-10-2018 IPR010994 RuvA domain 2-like D172_016475 faa3a422eac931ea831573bd5987c2c4 775 Pfam PF16921 Tex protein YqgF-like domain 324 449 3.7E-55 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain D172_016475 faa3a422eac931ea831573bd5987c2c4 775 SUPERFAMILY SSF47781 559 630 9.34E-20 T 14-10-2018 IPR010994 RuvA domain 2-like D172_016475 faa3a422eac931ea831573bd5987c2c4 775 Gene3D G3DSA:2.40.50.140 629 721 1.2E-28 T 14-10-2018 D172_016475 faa3a422eac931ea831573bd5987c2c4 775 SUPERFAMILY SSF53098 319 467 5.31E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_016475 faa3a422eac931ea831573bd5987c2c4 775 Gene3D G3DSA:3.30.420.140 322 449 3.5E-156 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 D172_016475 faa3a422eac931ea831573bd5987c2c4 775 Pfam PF12836 Helix-hairpin-helix motif 489 553 2.8E-27 T 14-10-2018 D172_016475 faa3a422eac931ea831573bd5987c2c4 775 SUPERFAMILY SSF50249 638 723 1.64E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_016475 faa3a422eac931ea831573bd5987c2c4 775 Gene3D G3DSA:1.10.10.650 1 108 1.3E-38 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily D172_006875 cb1c17c619c7c31474042fd737057db6 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 10 466 9.1E-232 T 14-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 D172_006875 cb1c17c619c7c31474042fd737057db6 477 Gene3D G3DSA:1.20.210.10 3 477 1.1E-208 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_006875 cb1c17c619c7c31474042fd737057db6 477 SUPERFAMILY SSF81442 10 465 4.19E-126 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_006875 cb1c17c619c7c31474042fd737057db6 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 14 444 1.1E-118 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_006875 cb1c17c619c7c31474042fd737057db6 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_014515 cfed2878e4f76a657e2aae8729a7fbea 430 Pfam PF00149 Calcineurin-like phosphoesterase 97 329 8.3E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D172_014515 cfed2878e4f76a657e2aae8729a7fbea 430 SUPERFAMILY SSF56300 101 398 6.7E-36 T 14-10-2018 D172_014515 cfed2878e4f76a657e2aae8729a7fbea 430 Gene3D G3DSA:3.60.21.10 90 414 3.1E-44 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like D172_019375 a3397126c3fbd0e75c2d6271229642df 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_019375 a3397126c3fbd0e75c2d6271229642df 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_019375 a3397126c3fbd0e75c2d6271229642df 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_019375 a3397126c3fbd0e75c2d6271229642df 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 2.6E-53 T 14-10-2018 D172_019375 a3397126c3fbd0e75c2d6271229642df 241 Gene3D G3DSA:3.40.50.720 3 241 7.6E-71 T 14-10-2018 D172_019375 a3397126c3fbd0e75c2d6271229642df 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 9.9E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_019375 a3397126c3fbd0e75c2d6271229642df 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 9.9E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_019375 a3397126c3fbd0e75c2d6271229642df 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 9.9E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_019375 a3397126c3fbd0e75c2d6271229642df 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.9E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_019375 a3397126c3fbd0e75c2d6271229642df 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.9E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_019375 a3397126c3fbd0e75c2d6271229642df 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 9.9E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_019375 a3397126c3fbd0e75c2d6271229642df 241 SUPERFAMILY SSF51735 3 240 2.04E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_019375 a3397126c3fbd0e75c2d6271229642df 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 1.1E-120 T 14-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D172_019375 a3397126c3fbd0e75c2d6271229642df 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 189 0.0063 T 14-10-2018 D172_001575 1da1a6b125bcf443a3bd4dc3c657ec57 376 Pfam PF01471 Putative peptidoglycan binding domain 299 352 3.8E-7 T 14-10-2018 IPR002477 Peptidoglycan binding-like D172_001575 1da1a6b125bcf443a3bd4dc3c657ec57 376 Pfam PF03783 Curli production assembly/transport component CsgG 44 244 2.6E-41 T 14-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 D172_001575 1da1a6b125bcf443a3bd4dc3c657ec57 376 SUPERFAMILY SSF47090 317 352 4.24E-5 T 14-10-2018 IPR036365 PGBD-like superfamily D172_000720 515c06e55c2bf232ad5518dc20dc19ef 135 Gene3D G3DSA:3.40.630.30 36 135 2.2E-20 T 14-10-2018 D172_000720 515c06e55c2bf232ad5518dc20dc19ef 135 Pfam PF00583 Acetyltransferase (GNAT) family 36 113 2.0E-8 T 14-10-2018 IPR000182 GNAT domain D172_000720 515c06e55c2bf232ad5518dc20dc19ef 135 SUPERFAMILY SSF55729 37 135 1.54E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_005530 b358ae234eb1dd7c036fc500dc88285c 254 Pfam PF13525 Outer membrane lipoprotein 38 244 3.0E-66 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like D172_005530 b358ae234eb1dd7c036fc500dc88285c 254 Gene3D G3DSA:1.25.40.10 39 253 7.3E-54 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_005530 b358ae234eb1dd7c036fc500dc88285c 254 SUPERFAMILY SSF48452 37 120 5.48E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_005530 b358ae234eb1dd7c036fc500dc88285c 254 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 10 251 1.3E-78 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD D172_005530 b358ae234eb1dd7c036fc500dc88285c 254 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 7 251 34.917 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD D172_005550 76ba63d5e54148134210db550d267d1e 515 Gene3D G3DSA:1.10.287.950 223 514 1.8E-55 T 14-10-2018 D172_005550 76ba63d5e54148134210db550d267d1e 515 Pfam PF08447 PAS fold 31 114 4.3E-19 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 D172_005550 76ba63d5e54148134210db550d267d1e 515 SUPERFAMILY SSF55785 17 114 1.92E-29 T 14-10-2018 IPR035965 PAS domain superfamily D172_005550 76ba63d5e54148134210db550d267d1e 515 Gene3D G3DSA:3.30.450.20 4 153 7.4E-30 T 14-10-2018 D172_005550 76ba63d5e54148134210db550d267d1e 515 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 14 113 1.2E-18 T 14-10-2018 IPR000014 PAS domain D172_005550 76ba63d5e54148134210db550d267d1e 515 SMART SM00086 80 121 5.8E-5 T 14-10-2018 IPR001610 PAC motif D172_005550 76ba63d5e54148134210db550d267d1e 515 SMART SM00283 253 514 2.1E-58 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_005550 76ba63d5e54148134210db550d267d1e 515 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 267 296 2.8E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_005550 76ba63d5e54148134210db550d267d1e 515 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 409 2.8E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_005550 76ba63d5e54148134210db550d267d1e 515 SMART SM00091 8 75 3.5E-6 T 14-10-2018 IPR000014 PAS domain D172_005550 76ba63d5e54148134210db550d267d1e 515 SUPERFAMILY SSF58104 259 515 1.44E-64 T 14-10-2018 D172_005550 76ba63d5e54148134210db550d267d1e 515 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 479 2.7E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_013890 efcf4ab89599d7d15850e24fa17e6ba0 609 Gene3D G3DSA:2.170.130.10 22 150 5.8E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_013890 efcf4ab89599d7d15850e24fa17e6ba0 609 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 146 3.5E-24 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_013890 efcf4ab89599d7d15850e24fa17e6ba0 609 SUPERFAMILY SSF56935 27 609 2.66E-114 T 14-10-2018 D172_013890 efcf4ab89599d7d15850e24fa17e6ba0 609 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 592 609 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site D172_013890 efcf4ab89599d7d15850e24fa17e6ba0 609 Gene3D G3DSA:2.40.170.20 151 609 3.9E-100 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_013890 efcf4ab89599d7d15850e24fa17e6ba0 609 Pfam PF00593 TonB dependent receptor 162 608 4.0E-51 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_013485 4a4d8f2f66ddd986c19e615ca4e08c63 512 Gene3D G3DSA:2.170.280.10 178 419 5.0E-148 T 14-10-2018 D172_013485 4a4d8f2f66ddd986c19e615ca4e08c63 512 Gene3D G3DSA:1.20.1330.10 45 471 5.0E-148 T 14-10-2018 D172_013485 4a4d8f2f66ddd986c19e615ca4e08c63 512 Pfam PF00700 Bacterial flagellin C-terminal helical region 427 511 1.9E-29 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 D172_013485 4a4d8f2f66ddd986c19e615ca4e08c63 512 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.8E-43 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 D172_013485 4a4d8f2f66ddd986c19e615ca4e08c63 512 Gene3D G3DSA:2.30.220.10 192 284 5.0E-148 T 14-10-2018 D172_013485 4a4d8f2f66ddd986c19e615ca4e08c63 512 Gene3D G3DSA:1.20.58.1830 5 511 5.0E-148 T 14-10-2018 D172_013485 4a4d8f2f66ddd986c19e615ca4e08c63 512 PRINTS PR00207 Flagellin signature 37 54 7.5E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 D172_013485 4a4d8f2f66ddd986c19e615ca4e08c63 512 PRINTS PR00207 Flagellin signature 76 95 7.5E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 D172_013485 4a4d8f2f66ddd986c19e615ca4e08c63 512 PRINTS PR00207 Flagellin signature 111 134 7.5E-25 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 D172_013485 4a4d8f2f66ddd986c19e615ca4e08c63 512 SUPERFAMILY SSF64518 2 511 4.97E-111 T 14-10-2018 D172_002385 263843c05e314c50b1231cf0d7135ac3 349 Gene3D G3DSA:3.40.50.300 1 239 1.3E-71 T 14-10-2018 D172_002385 263843c05e314c50b1231cf0d7135ac3 349 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_002385 263843c05e314c50b1231cf0d7135ac3 349 SMART SM00382 28 213 1.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_002385 263843c05e314c50b1231cf0d7135ac3 349 Pfam PF00005 ABC transporter 20 163 1.8E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_002385 263843c05e314c50b1231cf0d7135ac3 349 SUPERFAMILY SSF50331 273 348 2.72E-8 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal D172_002385 263843c05e314c50b1231cf0d7135ac3 349 SUPERFAMILY SSF52540 4 238 2.73E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_003915 c0f90ad97b0c1fb10af38f8b012cf424 105 Pfam PF00436 Single-strand binding protein family 6 86 1.9E-10 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 D172_003915 c0f90ad97b0c1fb10af38f8b012cf424 105 PIRSF PIRSF003135 2 105 1.5E-38 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 D172_003915 c0f90ad97b0c1fb10af38f8b012cf424 105 Gene3D G3DSA:2.40.50.140 2 105 8.8E-33 T 14-10-2018 D172_003915 c0f90ad97b0c1fb10af38f8b012cf424 105 SUPERFAMILY SSF50249 5 103 7.5E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_003915 c0f90ad97b0c1fb10af38f8b012cf424 105 Hamap MF_00720 Primosomal replication protein N [priB]. 6 104 22.546 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 D172_003915 c0f90ad97b0c1fb10af38f8b012cf424 105 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 7 104 9.7E-36 T 14-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 D172_018355 4d24b0e8e26b21828a9a5badaa29e448 561 Gene3D G3DSA:2.115.10.20 45 342 3.3E-67 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily D172_018355 4d24b0e8e26b21828a9a5badaa29e448 561 Gene3D G3DSA:2.60.120.200 354 555 3.8E-46 T 14-10-2018 D172_018355 4d24b0e8e26b21828a9a5badaa29e448 561 Pfam PF04616 Glycosyl hydrolases family 43 51 323 1.2E-61 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 D172_018355 4d24b0e8e26b21828a9a5badaa29e448 561 SUPERFAMILY SSF49899 357 556 1.15E-33 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D172_018355 4d24b0e8e26b21828a9a5badaa29e448 561 SUPERFAMILY SSF75005 51 328 4.23E-73 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 546 559 5.5E-13 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 243 256 5.5E-13 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 337 356 5.5E-13 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 99 117 5.5E-13 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 TIGRFAM TIGR01273 speA: arginine decarboxylase 7 635 6.3E-265 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 SUPERFAMILY SSF51419 67 349 3.11E-67 T 14-10-2018 IPR029066 PLP-binding barrel D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 3 636 42.173 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 Gene3D G3DSA:3.20.20.10 68 352 5.3E-236 T 14-10-2018 IPR029066 PLP-binding barrel D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 86 347 1.5E-51 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 PRINTS PR01180 Arginine decarboxylase signature 493 518 6.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 PRINTS PR01180 Arginine decarboxylase signature 200 222 6.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 PRINTS PR01180 Arginine decarboxylase signature 150 165 6.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 PRINTS PR01180 Arginine decarboxylase signature 176 197 6.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 PRINTS PR01180 Arginine decarboxylase signature 468 489 6.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 PRINTS PR01180 Arginine decarboxylase signature 546 567 6.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 PRINTS PR01180 Arginine decarboxylase signature 67 82 6.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 PRINTS PR01180 Arginine decarboxylase signature 327 344 6.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 PRINTS PR01180 Arginine decarboxylase signature 91 105 6.6E-66 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 PIRSF PIRSF001336 1 637 1.1E-254 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 Gene3D G3DSA:2.40.37.10 14 573 5.3E-236 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D172_011850 be49e07ae6bd717cb869a7a9ce4663d8 637 Gene3D G3DSA:1.20.58.930 369 464 5.3E-236 T 14-10-2018 D172_017775 d179ffa43f12cbdf1c5e0ce66378aa6c 403 Pfam PF06181 Urate oxidase N-terminal 4 298 1.0E-120 T 14-10-2018 IPR010389 Urate oxidase N-terminal D172_017775 d179ffa43f12cbdf1c5e0ce66378aa6c 403 SMART SM01235 292 400 0.0042 T 14-10-2018 IPR025992 Haem-binding domain D172_008585 0a5bd9d2f7a2bfede5550e9d8a8d9a76 170 Pfam PF04239 Protein of unknown function (DUF421) 94 161 1.3E-10 T 14-10-2018 IPR007353 Protein of unknown function DUF421 D172_008585 0a5bd9d2f7a2bfede5550e9d8a8d9a76 170 Gene3D G3DSA:3.30.240.20 86 157 1.6E-16 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily D172_001515 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF00665 Integrase core domain 109 222 1.9E-30 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_001515 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF13276 HTH-like domain 33 84 1.7E-8 T 14-10-2018 IPR025948 HTH-like domain D172_001515 a39764aa5146c1673ff220a943fcc7d5 275 SUPERFAMILY SSF53098 102 270 5.01E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_001515 a39764aa5146c1673ff220a943fcc7d5 275 Gene3D G3DSA:3.30.420.10 104 269 2.0E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_006600 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF00665 Integrase core domain 109 222 1.9E-30 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_006600 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF13276 HTH-like domain 33 84 1.7E-8 T 14-10-2018 IPR025948 HTH-like domain D172_006600 a39764aa5146c1673ff220a943fcc7d5 275 SUPERFAMILY SSF53098 102 270 5.01E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_006600 a39764aa5146c1673ff220a943fcc7d5 275 Gene3D G3DSA:3.30.420.10 104 269 2.0E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_008595 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF00665 Integrase core domain 109 222 1.9E-30 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_008595 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF13276 HTH-like domain 33 84 1.7E-8 T 14-10-2018 IPR025948 HTH-like domain D172_008595 a39764aa5146c1673ff220a943fcc7d5 275 SUPERFAMILY SSF53098 102 270 5.01E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_008595 a39764aa5146c1673ff220a943fcc7d5 275 Gene3D G3DSA:3.30.420.10 104 269 2.0E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_012230 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF00665 Integrase core domain 109 222 1.9E-30 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_012230 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF13276 HTH-like domain 33 84 1.7E-8 T 14-10-2018 IPR025948 HTH-like domain D172_012230 a39764aa5146c1673ff220a943fcc7d5 275 SUPERFAMILY SSF53098 102 270 5.01E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_012230 a39764aa5146c1673ff220a943fcc7d5 275 Gene3D G3DSA:3.30.420.10 104 269 2.0E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_009360 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF00665 Integrase core domain 109 222 1.9E-30 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_009360 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF13276 HTH-like domain 33 84 1.7E-8 T 14-10-2018 IPR025948 HTH-like domain D172_009360 a39764aa5146c1673ff220a943fcc7d5 275 SUPERFAMILY SSF53098 102 270 5.01E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_009360 a39764aa5146c1673ff220a943fcc7d5 275 Gene3D G3DSA:3.30.420.10 104 269 2.0E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_017325 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF00665 Integrase core domain 109 222 1.9E-30 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_017325 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF13276 HTH-like domain 33 84 1.7E-8 T 14-10-2018 IPR025948 HTH-like domain D172_017325 a39764aa5146c1673ff220a943fcc7d5 275 SUPERFAMILY SSF53098 102 270 5.01E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_017325 a39764aa5146c1673ff220a943fcc7d5 275 Gene3D G3DSA:3.30.420.10 104 269 2.0E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_011770 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF00665 Integrase core domain 109 222 1.9E-30 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_011770 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF13276 HTH-like domain 33 84 1.7E-8 T 14-10-2018 IPR025948 HTH-like domain D172_011770 a39764aa5146c1673ff220a943fcc7d5 275 SUPERFAMILY SSF53098 102 270 5.01E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_011770 a39764aa5146c1673ff220a943fcc7d5 275 Gene3D G3DSA:3.30.420.10 104 269 2.0E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_020725 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF00665 Integrase core domain 109 222 1.9E-30 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_020725 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF13276 HTH-like domain 33 84 1.7E-8 T 14-10-2018 IPR025948 HTH-like domain D172_020725 a39764aa5146c1673ff220a943fcc7d5 275 SUPERFAMILY SSF53098 102 270 5.01E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_020725 a39764aa5146c1673ff220a943fcc7d5 275 Gene3D G3DSA:3.30.420.10 104 269 2.0E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_011405 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF00665 Integrase core domain 109 222 1.9E-30 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_011405 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF13276 HTH-like domain 33 84 1.7E-8 T 14-10-2018 IPR025948 HTH-like domain D172_011405 a39764aa5146c1673ff220a943fcc7d5 275 SUPERFAMILY SSF53098 102 270 5.01E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_011405 a39764aa5146c1673ff220a943fcc7d5 275 Gene3D G3DSA:3.30.420.10 104 269 2.0E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_011555 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF00665 Integrase core domain 109 222 1.9E-30 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_011555 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF13276 HTH-like domain 33 84 1.7E-8 T 14-10-2018 IPR025948 HTH-like domain D172_011555 a39764aa5146c1673ff220a943fcc7d5 275 SUPERFAMILY SSF53098 102 270 5.01E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_011555 a39764aa5146c1673ff220a943fcc7d5 275 Gene3D G3DSA:3.30.420.10 104 269 2.0E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_014120 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF00665 Integrase core domain 109 222 1.9E-30 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_014120 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF13276 HTH-like domain 33 84 1.7E-8 T 14-10-2018 IPR025948 HTH-like domain D172_014120 a39764aa5146c1673ff220a943fcc7d5 275 SUPERFAMILY SSF53098 102 270 5.01E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_014120 a39764aa5146c1673ff220a943fcc7d5 275 Gene3D G3DSA:3.30.420.10 104 269 2.0E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_014685 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF00665 Integrase core domain 109 222 1.9E-30 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_014685 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF13276 HTH-like domain 33 84 1.7E-8 T 14-10-2018 IPR025948 HTH-like domain D172_014685 a39764aa5146c1673ff220a943fcc7d5 275 SUPERFAMILY SSF53098 102 270 5.01E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_014685 a39764aa5146c1673ff220a943fcc7d5 275 Gene3D G3DSA:3.30.420.10 104 269 2.0E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_012470 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF00665 Integrase core domain 109 222 1.9E-30 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_012470 a39764aa5146c1673ff220a943fcc7d5 275 Pfam PF13276 HTH-like domain 33 84 1.7E-8 T 14-10-2018 IPR025948 HTH-like domain D172_012470 a39764aa5146c1673ff220a943fcc7d5 275 SUPERFAMILY SSF53098 102 270 5.01E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_012470 a39764aa5146c1673ff220a943fcc7d5 275 Gene3D G3DSA:3.30.420.10 104 269 2.0E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_007990 086ccf5db76353f4c5bea47b445929d8 219 SUPERFAMILY SSF47616 77 207 6.69E-22 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D172_007990 086ccf5db76353f4c5bea47b445929d8 219 Gene3D G3DSA:3.40.30.10 2 94 5.9E-14 T 14-10-2018 D172_007990 086ccf5db76353f4c5bea47b445929d8 219 Pfam PF00043 Glutathione S-transferase, C-terminal domain 128 193 1.1E-10 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal D172_007990 086ccf5db76353f4c5bea47b445929d8 219 Gene3D G3DSA:1.20.1050.10 95 199 1.7E-11 T 14-10-2018 D172_007990 086ccf5db76353f4c5bea47b445929d8 219 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 76 1.3E-13 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D172_007990 086ccf5db76353f4c5bea47b445929d8 219 SUPERFAMILY SSF52833 5 105 5.61E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_009155 910dd8ba1b880cbdc2d490e8362b00b3 234 SMART SM00934 8 229 4.9E-99 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D172_009155 910dd8ba1b880cbdc2d490e8362b00b3 234 SUPERFAMILY SSF51366 8 232 7.49E-79 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D172_009155 910dd8ba1b880cbdc2d490e8362b00b3 234 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 60 73 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D172_009155 910dd8ba1b880cbdc2d490e8362b00b3 234 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 6 234 39.625 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D172_009155 910dd8ba1b880cbdc2d490e8362b00b3 234 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 10 229 5.3E-62 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D172_009155 910dd8ba1b880cbdc2d490e8362b00b3 234 Gene3D G3DSA:3.20.20.70 4 233 2.6E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_009155 910dd8ba1b880cbdc2d490e8362b00b3 234 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 8 225 1.1E-51 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D172_000055 1c36d2ff3efc2a22e8006f0459edef47 363 Gene3D G3DSA:3.40.50.450 17 293 3.6E-96 T 14-10-2018 D172_000055 1c36d2ff3efc2a22e8006f0459edef47 363 SUPERFAMILY SSF102405 82 287 9.77E-46 T 14-10-2018 D172_000055 1c36d2ff3efc2a22e8006f0459edef47 363 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 73 287 1.0E-73 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 D172_000055 1c36d2ff3efc2a22e8006f0459edef47 363 Gene3D G3DSA:1.10.10.10 294 360 4.9E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_000055 1c36d2ff3efc2a22e8006f0459edef47 363 Pfam PF02481 DNA recombination-mediator protein A 75 279 6.6E-77 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 D172_005845 bf6fe2413574c9efbb70f2c2fb70c25a 365 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 36.588 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D172_005845 bf6fe2413574c9efbb70f2c2fb70c25a 365 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D172_005845 bf6fe2413574c9efbb70f2c2fb70c25a 365 PIRSF PIRSF001456 3 362 2.4E-137 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D172_005845 bf6fe2413574c9efbb70f2c2fb70c25a 365 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 4.5E-136 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D172_005845 bf6fe2413574c9efbb70f2c2fb70c25a 365 Gene3D G3DSA:3.60.150.10 1 362 8.6E-152 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D172_005845 bf6fe2413574c9efbb70f2c2fb70c25a 365 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D172_005845 bf6fe2413574c9efbb70f2c2fb70c25a 365 SUPERFAMILY SSF103263 4 356 4.45E-144 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D172_005845 bf6fe2413574c9efbb70f2c2fb70c25a 365 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D172_005845 bf6fe2413574c9efbb70f2c2fb70c25a 365 Pfam PF01264 Chorismate synthase 10 345 6.7E-137 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 D172_019010 745daac73ea708d36174ffb2c77a6363 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 6.3E-286 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 D172_019010 745daac73ea708d36174ffb2c77a6363 638 SUPERFAMILY SSF53067 4 184 2.59E-64 T 14-10-2018 D172_019010 745daac73ea708d36174ffb2c77a6363 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 D172_019010 745daac73ea708d36174ffb2c77a6363 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 36.235 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 D172_019010 745daac73ea708d36174ffb2c77a6363 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 D172_019010 745daac73ea708d36174ffb2c77a6363 638 SUPERFAMILY SSF100920 384 540 1.57E-61 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 D172_019010 745daac73ea708d36174ffb2c77a6363 638 Gene3D G3DSA:3.90.640.10 229 316 1.7E-164 T 14-10-2018 D172_019010 745daac73ea708d36174ffb2c77a6363 638 PRINTS PR00301 70kDa heat shock protein signature 198 208 1.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_019010 745daac73ea708d36174ffb2c77a6363 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_019010 745daac73ea708d36174ffb2c77a6363 638 PRINTS PR00301 70kDa heat shock protein signature 388 407 1.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_019010 745daac73ea708d36174ffb2c77a6363 638 PRINTS PR00301 70kDa heat shock protein signature 469 485 1.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_019010 745daac73ea708d36174ffb2c77a6363 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_019010 745daac73ea708d36174ffb2c77a6363 638 PRINTS PR00301 70kDa heat shock protein signature 138 158 1.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_019010 745daac73ea708d36174ffb2c77a6363 638 PRINTS PR00301 70kDa heat shock protein signature 334 350 1.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_019010 745daac73ea708d36174ffb2c77a6363 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_019010 745daac73ea708d36174ffb2c77a6363 638 PRINTS PR00301 70kDa heat shock protein signature 365 385 1.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_019010 745daac73ea708d36174ffb2c77a6363 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 D172_019010 745daac73ea708d36174ffb2c77a6363 638 Gene3D G3DSA:1.20.1270.10 524 603 3.4E-25 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 D172_019010 745daac73ea708d36174ffb2c77a6363 638 Gene3D G3DSA:3.30.420.40 180 366 1.7E-164 T 14-10-2018 D172_019010 745daac73ea708d36174ffb2c77a6363 638 SUPERFAMILY SSF100934 535 600 1.57E-5 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 D172_019010 745daac73ea708d36174ffb2c77a6363 638 Gene3D G3DSA:2.60.34.10 383 523 2.0E-65 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 D172_019010 745daac73ea708d36174ffb2c77a6363 638 SUPERFAMILY SSF53067 187 382 3.21E-66 T 14-10-2018 D172_019010 745daac73ea708d36174ffb2c77a6363 638 Gene3D G3DSA:3.30.420.40 5 379 1.7E-164 T 14-10-2018 D172_019010 745daac73ea708d36174ffb2c77a6363 638 Pfam PF00012 Hsp70 protein 4 601 9.5E-260 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_001870 96beb4fe04d7cb6e50100e40d54d64eb 491 Gene3D G3DSA:1.10.530.10 113 268 1.1E-30 T 14-10-2018 D172_001870 96beb4fe04d7cb6e50100e40d54d64eb 491 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 139 167 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 D172_001870 96beb4fe04d7cb6e50100e40d54d64eb 491 Pfam PF01476 LysM domain 345 386 4.9E-10 T 14-10-2018 IPR018392 LysM domain D172_001870 96beb4fe04d7cb6e50100e40d54d64eb 491 Pfam PF01476 LysM domain 420 462 2.2E-11 T 14-10-2018 IPR018392 LysM domain D172_001870 96beb4fe04d7cb6e50100e40d54d64eb 491 SUPERFAMILY SSF53955 118 263 1.1E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily D172_001870 96beb4fe04d7cb6e50100e40d54d64eb 491 SUPERFAMILY SSF54106 420 462 1.01E-9 T 14-10-2018 D172_001870 96beb4fe04d7cb6e50100e40d54d64eb 491 SMART SM00257 419 463 2.5E-13 T 14-10-2018 IPR018392 LysM domain D172_001870 96beb4fe04d7cb6e50100e40d54d64eb 491 SMART SM00257 344 387 1.2E-11 T 14-10-2018 IPR018392 LysM domain D172_001870 96beb4fe04d7cb6e50100e40d54d64eb 491 Pfam PF01464 Transglycosylase SLT domain 131 233 2.7E-23 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 D172_001870 96beb4fe04d7cb6e50100e40d54d64eb 491 Gene3D G3DSA:3.10.350.10 417 471 4.2E-13 T 14-10-2018 IPR036779 LysM domain superfamily D172_001870 96beb4fe04d7cb6e50100e40d54d64eb 491 Gene3D G3DSA:3.10.350.10 342 391 1.8E-13 T 14-10-2018 IPR036779 LysM domain superfamily D172_001870 96beb4fe04d7cb6e50100e40d54d64eb 491 SUPERFAMILY SSF54106 344 386 1.1E-9 T 14-10-2018 D172_001030 f4a9913803effae141ebd48cd2154985 812 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 811 25.717 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 D172_001030 f4a9913803effae141ebd48cd2154985 812 Pfam PF01553 Acyltransferase 290 427 2.7E-20 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D172_001030 f4a9913803effae141ebd48cd2154985 812 PIRSF PIRSF500064 7 812 2.2E-257 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 D172_001030 f4a9913803effae141ebd48cd2154985 812 SUPERFAMILY SSF69593 250 488 2.22E-27 T 14-10-2018 D172_001030 f4a9913803effae141ebd48cd2154985 812 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 15 803 0.0 T 14-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 D172_001030 f4a9913803effae141ebd48cd2154985 812 SMART SM00563 303 430 3.0E-23 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D172_001030 f4a9913803effae141ebd48cd2154985 812 PIRSF PIRSF000437 19 811 2.3E-248 T 14-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 D172_004165 06a5b67bb87dc24c4386f51adec9d05a 350 Gene3D G3DSA:2.30.40.20 21 72 5.9E-62 T 14-10-2018 D172_004165 06a5b67bb87dc24c4386f51adec9d05a 350 Gene3D G3DSA:3.30.1490.100 236 349 9.2E-23 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 D172_004165 06a5b67bb87dc24c4386f51adec9d05a 350 Hamap MF_01113 DNA polymerase IV [dinB]. 1 348 34.614 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 D172_004165 06a5b67bb87dc24c4386f51adec9d05a 350 Gene3D G3DSA:3.30.70.270 5 163 5.9E-62 T 14-10-2018 D172_004165 06a5b67bb87dc24c4386f51adec9d05a 350 Pfam PF00817 impB/mucB/samB family 7 153 2.2E-48 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 D172_004165 06a5b67bb87dc24c4386f51adec9d05a 350 SUPERFAMILY SSF100879 240 346 2.75E-20 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 D172_004165 06a5b67bb87dc24c4386f51adec9d05a 350 Pfam PF11799 impB/mucB/samB family C-terminal domain 235 335 6.1E-7 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 D172_004165 06a5b67bb87dc24c4386f51adec9d05a 350 Gene3D G3DSA:1.10.150.20 165 229 2.5E-14 T 14-10-2018 D172_004165 06a5b67bb87dc24c4386f51adec9d05a 350 Pfam PF11798 IMS family HHH motif 165 195 5.7E-8 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 D172_004165 06a5b67bb87dc24c4386f51adec9d05a 350 SUPERFAMILY SSF56672 2 227 2.49E-86 T 14-10-2018 D172_004455 947d614aaa6de540fe082083903e2ca7 888 Pfam PF00512 His Kinase A (phospho-acceptor) domain 409 472 6.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_004455 947d614aaa6de540fe082083903e2ca7 888 SUPERFAMILY SSF55874 462 630 1.31E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_004455 947d614aaa6de540fe082083903e2ca7 888 Gene3D G3DSA:1.20.120.160 783 887 3.0E-13 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_004455 947d614aaa6de540fe082083903e2ca7 888 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 572 1.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004455 947d614aaa6de540fe082083903e2ca7 888 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 611 1.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004455 947d614aaa6de540fe082083903e2ca7 888 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 630 1.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004455 947d614aaa6de540fe082083903e2ca7 888 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 586 1.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_004455 947d614aaa6de540fe082083903e2ca7 888 SMART SM00073 793 883 6.0E-9 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D172_004455 947d614aaa6de540fe082083903e2ca7 888 SUPERFAMILY SSF158472 318 366 3.01E-9 T 14-10-2018 D172_004455 947d614aaa6de540fe082083903e2ca7 888 SUPERFAMILY SSF47226 788 883 2.88E-14 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_004455 947d614aaa6de540fe082083903e2ca7 888 Gene3D G3DSA:1.10.287.130 394 475 8.5E-25 T 14-10-2018 D172_004455 947d614aaa6de540fe082083903e2ca7 888 Pfam PF01627 Hpt domain 803 880 1.5E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D172_004455 947d614aaa6de540fe082083903e2ca7 888 Pfam PF02743 Cache domain 36 277 1.0E-11 T 14-10-2018 IPR033479 Double Cache domain 1 D172_004455 947d614aaa6de540fe082083903e2ca7 888 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 521 629 4.0E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_004455 947d614aaa6de540fe082083903e2ca7 888 Pfam PF00072 Response regulator receiver domain 668 775 8.5E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004455 947d614aaa6de540fe082083903e2ca7 888 Pfam PF00672 HAMP domain 318 365 5.8E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_004455 947d614aaa6de540fe082083903e2ca7 888 Gene3D G3DSA:1.20.1480.50 280 374 5.2E-10 T 14-10-2018 D172_004455 947d614aaa6de540fe082083903e2ca7 888 SMART SM00388 408 473 4.0E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_004455 947d614aaa6de540fe082083903e2ca7 888 SMART SM00387 520 633 3.1E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_004455 947d614aaa6de540fe082083903e2ca7 888 SUPERFAMILY SSF52172 666 782 2.42E-32 T 14-10-2018 IPR011006 CheY-like superfamily D172_004455 947d614aaa6de540fe082083903e2ca7 888 Gene3D G3DSA:3.30.565.10 476 635 8.5E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_004455 947d614aaa6de540fe082083903e2ca7 888 SMART SM00304 316 368 1.2E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_004455 947d614aaa6de540fe082083903e2ca7 888 Gene3D G3DSA:3.40.50.2300 661 782 4.3E-32 T 14-10-2018 D172_004455 947d614aaa6de540fe082083903e2ca7 888 SUPERFAMILY SSF47384 394 474 1.29E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_004455 947d614aaa6de540fe082083903e2ca7 888 SMART SM00448 666 777 2.4E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_019985 e13a62133d026e79ac87340c56f6b479 379 SMART SM00859 11 130 1.1E-23 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 D172_019985 e13a62133d026e79ac87340c56f6b479 379 Gene3D G3DSA:3.40.50.720 12 365 1.0E-140 T 14-10-2018 D172_019985 e13a62133d026e79ac87340c56f6b479 379 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 11 129 8.1E-23 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 D172_019985 e13a62133d026e79ac87340c56f6b479 379 PIRSF PIRSF000148 9 379 7.0E-66 T 14-10-2018 D172_019985 e13a62133d026e79ac87340c56f6b479 379 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 270 284 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_019985 e13a62133d026e79ac87340c56f6b479 379 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 10 376 1.5E-185 T 14-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_019985 e13a62133d026e79ac87340c56f6b479 379 SUPERFAMILY SSF51735 9 155 7.17E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_019985 e13a62133d026e79ac87340c56f6b479 379 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 9 376 33.241 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_019985 e13a62133d026e79ac87340c56f6b479 379 Gene3D G3DSA:3.30.360.10 143 359 1.0E-140 T 14-10-2018 D172_019985 e13a62133d026e79ac87340c56f6b479 379 SUPERFAMILY SSF55347 142 363 1.82E-76 T 14-10-2018 D172_019985 e13a62133d026e79ac87340c56f6b479 379 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 152 362 1.7E-54 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D172_006175 37655f5e4b07528f0fe8ff6052b13329 237 Gene3D G3DSA:3.40.50.2300 4 136 7.5E-33 T 14-10-2018 D172_006175 37655f5e4b07528f0fe8ff6052b13329 237 SMART SM00862 160 236 8.1E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_006175 37655f5e4b07528f0fe8ff6052b13329 237 SUPERFAMILY SSF46894 144 236 1.7E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_006175 37655f5e4b07528f0fe8ff6052b13329 237 Gene3D G3DSA:1.10.10.10 137 237 5.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_006175 37655f5e4b07528f0fe8ff6052b13329 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 236 2.6E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_006175 37655f5e4b07528f0fe8ff6052b13329 237 Pfam PF00072 Response regulator receiver domain 16 124 7.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_006175 37655f5e4b07528f0fe8ff6052b13329 237 SUPERFAMILY SSF52172 13 140 1.57E-36 T 14-10-2018 IPR011006 CheY-like superfamily D172_006175 37655f5e4b07528f0fe8ff6052b13329 237 SMART SM00448 14 124 7.0E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_017050 69ddf120c85f620eac21a9c7997e4e10 157 ProSitePatterns PS00818 Dps protein family signature 1. 39 55 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 D172_017050 69ddf120c85f620eac21a9c7997e4e10 157 PIRSF PIRSF005900 1 157 1.3E-43 T 14-10-2018 IPR002177 DNA-binding protein Dps D172_017050 69ddf120c85f620eac21a9c7997e4e10 157 ProSitePatterns PS00819 Dps protein family signature 2. 65 79 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 D172_017050 69ddf120c85f620eac21a9c7997e4e10 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 134 152 2.7E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps D172_017050 69ddf120c85f620eac21a9c7997e4e10 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 39 55 2.7E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps D172_017050 69ddf120c85f620eac21a9c7997e4e10 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 63 79 2.7E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps D172_017050 69ddf120c85f620eac21a9c7997e4e10 157 SUPERFAMILY SSF47240 4 157 6.16E-43 T 14-10-2018 IPR009078 Ferritin-like superfamily D172_017050 69ddf120c85f620eac21a9c7997e4e10 157 Gene3D G3DSA:1.20.1260.10 1 156 7.3E-52 T 14-10-2018 IPR012347 Ferritin-like D172_017050 69ddf120c85f620eac21a9c7997e4e10 157 Pfam PF00210 Ferritin-like domain 19 157 2.0E-24 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 D172_003450 939e9cb35c83d3f5c5949c450dc92c8a 244 SMART SM00382 7 204 4.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_003450 939e9cb35c83d3f5c5949c450dc92c8a 244 ProSitePatterns PS00211 ABC transporters family signature. 119 133 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_003450 939e9cb35c83d3f5c5949c450dc92c8a 244 Pfam PF00005 ABC transporter 1 147 4.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_003450 939e9cb35c83d3f5c5949c450dc92c8a 244 SUPERFAMILY SSF52540 2 212 1.15E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_003450 939e9cb35c83d3f5c5949c450dc92c8a 244 Gene3D G3DSA:3.40.50.300 1 226 2.8E-57 T 14-10-2018 D172_002975 2e03a8353e91c514dd40d104cb6f9fec 308 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 18 308 59.385 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 D172_002975 2e03a8353e91c514dd40d104cb6f9fec 308 SUPERFAMILY SSF56349 19 298 5.59E-62 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D172_002975 2e03a8353e91c514dd40d104cb6f9fec 308 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 24 308 5.2E-118 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 D172_002975 2e03a8353e91c514dd40d104cb6f9fec 308 Pfam PF00589 Phage integrase family 124 294 1.8E-55 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D172_002975 2e03a8353e91c514dd40d104cb6f9fec 308 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 20 308 56.919 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD D172_002975 2e03a8353e91c514dd40d104cb6f9fec 308 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 22 102 2.5E-19 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D172_002975 2e03a8353e91c514dd40d104cb6f9fec 308 Gene3D G3DSA:1.10.150.130 12 120 2.1E-21 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal D172_002975 2e03a8353e91c514dd40d104cb6f9fec 308 Gene3D G3DSA:1.10.443.10 122 302 1.3E-70 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D172_016535 26be3ee50372903e5a1ebad3c2c04b0a 276 SMART SM00138 8 270 2.0E-110 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D172_016535 26be3ee50372903e5a1ebad3c2c04b0a 276 Gene3D G3DSA:3.40.50.150 74 270 5.0E-65 T 14-10-2018 D172_016535 26be3ee50372903e5a1ebad3c2c04b0a 276 SUPERFAMILY SSF47757 2 74 5.23E-20 T 14-10-2018 D172_016535 26be3ee50372903e5a1ebad3c2c04b0a 276 Pfam PF01739 CheR methyltransferase, SAM binding domain 75 265 1.2E-65 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal D172_016535 26be3ee50372903e5a1ebad3c2c04b0a 276 SUPERFAMILY SSF53335 75 268 6.39E-51 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_016535 26be3ee50372903e5a1ebad3c2c04b0a 276 PIRSF PIRSF000410 1 271 7.7E-104 T 14-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR D172_016535 26be3ee50372903e5a1ebad3c2c04b0a 276 PRINTS PR00996 Glutamate methyltransferase family signature 229 252 3.3E-46 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D172_016535 26be3ee50372903e5a1ebad3c2c04b0a 276 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 3.3E-46 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D172_016535 26be3ee50372903e5a1ebad3c2c04b0a 276 PRINTS PR00996 Glutamate methyltransferase family signature 68 80 3.3E-46 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D172_016535 26be3ee50372903e5a1ebad3c2c04b0a 276 PRINTS PR00996 Glutamate methyltransferase family signature 108 128 3.3E-46 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D172_016535 26be3ee50372903e5a1ebad3c2c04b0a 276 PRINTS PR00996 Glutamate methyltransferase family signature 210 224 3.3E-46 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D172_016535 26be3ee50372903e5a1ebad3c2c04b0a 276 PRINTS PR00996 Glutamate methyltransferase family signature 141 157 3.3E-46 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D172_016535 26be3ee50372903e5a1ebad3c2c04b0a 276 Gene3D G3DSA:1.10.155.10 1 73 4.1E-25 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily D172_016535 26be3ee50372903e5a1ebad3c2c04b0a 276 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 61 4.6E-17 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal D172_020930 977cdd95f67e927e5053e02a63827be3 555 Gene3D G3DSA:2.40.10.120 353 554 5.0E-21 T 14-10-2018 D172_020930 977cdd95f67e927e5053e02a63827be3 555 SUPERFAMILY SSF56672 52 249 8.9E-13 T 14-10-2018 D172_020930 977cdd95f67e927e5053e02a63827be3 555 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 49 62 3.4E-36 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D172_020930 977cdd95f67e927e5053e02a63827be3 555 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 110 128 3.4E-36 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D172_020930 977cdd95f67e927e5053e02a63827be3 555 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 177 190 3.4E-36 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D172_020930 977cdd95f67e927e5053e02a63827be3 555 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 94 108 3.4E-36 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D172_020930 977cdd95f67e927e5053e02a63827be3 555 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 257 263 3.4E-36 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D172_020930 977cdd95f67e927e5053e02a63827be3 555 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 63 75 3.4E-36 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D172_020930 977cdd95f67e927e5053e02a63827be3 555 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 159 172 3.4E-36 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D172_020930 977cdd95f67e927e5053e02a63827be3 555 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 192 203 3.4E-36 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 D172_020930 977cdd95f67e927e5053e02a63827be3 555 Pfam PF13365 Trypsin-like peptidase domain 384 524 5.4E-16 T 14-10-2018 D172_020930 977cdd95f67e927e5053e02a63827be3 555 SUPERFAMILY SSF50494 369 552 1.44E-23 T 14-10-2018 IPR009003 Peptidase S1, PA clan D172_020930 977cdd95f67e927e5053e02a63827be3 555 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 54 262 3.4E-27 T 14-10-2018 IPR000477 Reverse transcriptase domain D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 Gene3D G3DSA:3.40.120.10 174 362 1.1E-63 T 14-10-2018 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 3.6E-19 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 SUPERFAMILY SSF53738 156 256 1.61E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 442 5.4E-186 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 Gene3D G3DSA:3.30.310.50 371 445 8.0E-22 T 14-10-2018 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 8.6E-44 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 2.8E-14 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 2.8E-14 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 2.8E-14 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 Gene3D G3DSA:3.40.120.10 257 339 1.1E-63 T 14-10-2018 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 444 46.68 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 Gene3D G3DSA:3.40.120.10 3 154 2.8E-48 T 14-10-2018 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 368 3.3E-30 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 SUPERFAMILY SSF55957 358 444 4.45E-21 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 SUPERFAMILY SSF53738 3 181 1.92E-47 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 SUPERFAMILY SSF53738 258 364 9.42E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_013030 b790dfe29773bb9f7fa8b6ca58f0d893 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 5.8E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_020700 234e090c0943fc44da4e5c00700ad1df 408 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 4.6E-21 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 D172_020700 234e090c0943fc44da4e5c00700ad1df 408 Pfam PF07670 Nucleoside recognition 93 187 3.3E-8 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 D172_020700 234e090c0943fc44da4e5c00700ad1df 408 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 195 404 1.9E-78 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 D172_020700 234e090c0943fc44da4e5c00700ad1df 408 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 404 2.1E-149 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 D172_012575 1c3474ceaa66d13ea33759abf4d34853 200 Hamap MF_00052_B Ribonuclease HII [rnhB]. 10 189 37.185 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 D172_012575 1c3474ceaa66d13ea33759abf4d34853 200 Gene3D G3DSA:3.30.420.10 2 199 2.6E-75 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_012575 1c3474ceaa66d13ea33759abf4d34853 200 SUPERFAMILY SSF53098 5 194 6.83E-68 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_012575 1c3474ceaa66d13ea33759abf4d34853 200 Pfam PF01351 Ribonuclease HII 12 188 5.3E-40 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain D172_002420 c12bdd1beed3470601de69cc17bf1ade 385 SUPERFAMILY SSF82051 2 157 6.28E-55 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily D172_002420 c12bdd1beed3470601de69cc17bf1ade 385 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 D172_002420 c12bdd1beed3470601de69cc17bf1ade 385 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.134 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 D172_002420 c12bdd1beed3470601de69cc17bf1ade 385 PIRSF PIRSF002401 1 374 8.1E-139 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type D172_002420 c12bdd1beed3470601de69cc17bf1ade 385 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.6E-143 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 D172_002420 c12bdd1beed3470601de69cc17bf1ade 385 SUPERFAMILY SSF52540 152 336 3.12E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_002420 c12bdd1beed3470601de69cc17bf1ade 385 Gene3D G3DSA:3.40.50.300 159 337 1.7E-50 T 14-10-2018 D172_002420 c12bdd1beed3470601de69cc17bf1ade 385 Pfam PF01018 GTP1/OBG 4 156 2.4E-57 T 14-10-2018 IPR006169 GTP1/OBG domain D172_002420 c12bdd1beed3470601de69cc17bf1ade 385 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 6.7E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_002420 c12bdd1beed3470601de69cc17bf1ade 385 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 6.7E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_002420 c12bdd1beed3470601de69cc17bf1ade 385 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 6.7E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_002420 c12bdd1beed3470601de69cc17bf1ade 385 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 6.7E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_002420 c12bdd1beed3470601de69cc17bf1ade 385 Gene3D G3DSA:2.70.210.12 1 158 5.5E-59 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily D172_002420 c12bdd1beed3470601de69cc17bf1ade 385 Pfam PF01926 50S ribosome-binding GTPase 161 284 7.7E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_007335 50a0c674c8891b231ca2b45e3435a4d1 378 SUPERFAMILY SSF53756 71 362 4.46E-21 T 14-10-2018 D172_007335 50a0c674c8891b231ca2b45e3435a4d1 378 Gene3D G3DSA:3.40.50.2000 198 347 7.1E-31 T 14-10-2018 D172_007335 50a0c674c8891b231ca2b45e3435a4d1 378 Pfam PF13692 Glycosyl transferases group 1 208 336 1.3E-7 T 14-10-2018 D172_007335 50a0c674c8891b231ca2b45e3435a4d1 378 Gene3D G3DSA:3.40.50.2000 14 197 3.9E-5 T 14-10-2018 D172_017540 c09964e33d4d60247e691769b4745a40 1169 Pfam PF14331 ImcF-related N-terminal domain 198 445 1.4E-82 T 14-10-2018 IPR025743 ImcF-related, N-terminal domain D172_017540 c09964e33d4d60247e691769b4745a40 1169 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 22 1166 0.0 T 14-10-2018 IPR017731 Type VI secretion system, IcmF D172_017540 c09964e33d4d60247e691769b4745a40 1169 SUPERFAMILY SSF52540 134 288 3.67E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_017540 c09964e33d4d60247e691769b4745a40 1169 Pfam PF06761 Intracellular multiplication and human macrophage-killing 498 798 2.6E-65 T 14-10-2018 IPR009612 ImcF-related D172_017540 c09964e33d4d60247e691769b4745a40 1169 Pfam PF06744 Type VI secretion protein IcmF C-terminal 921 1117 9.4E-59 T 14-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal D172_014745 b29d12e521c8bbbaa2b35227c6fd8d78 356 Gene3D G3DSA:1.10.760.10 216 356 3.4E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_014745 b29d12e521c8bbbaa2b35227c6fd8d78 356 Gene3D G3DSA:1.10.760.10 57 215 8.6E-48 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_014745 b29d12e521c8bbbaa2b35227c6fd8d78 356 SUPERFAMILY SSF46626 59 196 4.71E-39 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_014745 b29d12e521c8bbbaa2b35227c6fd8d78 356 Pfam PF03150 Di-haem cytochrome c peroxidase 62 206 3.8E-41 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 D172_014745 b29d12e521c8bbbaa2b35227c6fd8d78 356 PIRSF PIRSF000294 39 356 1.4E-65 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 D172_014745 b29d12e521c8bbbaa2b35227c6fd8d78 356 SUPERFAMILY SSF46626 217 356 1.54E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_008470 7773f4581e2b4abdb17e8df023a12bfb 281 SUPERFAMILY SSF56300 15 251 1.55E-30 T 14-10-2018 D172_008470 7773f4581e2b4abdb17e8df023a12bfb 281 Pfam PF00149 Calcineurin-like phosphoesterase 17 213 3.1E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D172_008470 7773f4581e2b4abdb17e8df023a12bfb 281 Gene3D G3DSA:3.60.21.10 14 255 3.6E-20 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like D172_013415 9c5eda4959727802e3cbf4d2f778cc31 444 SMART SM00382 162 345 2.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_013415 9c5eda4959727802e3cbf4d2f778cc31 444 SUPERFAMILY SSF52540 97 367 2.77E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_013415 9c5eda4959727802e3cbf4d2f778cc31 444 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 28 439 2.7E-199 T 14-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_013415 9c5eda4959727802e3cbf4d2f778cc31 444 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 352 361 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_013415 9c5eda4959727802e3cbf4d2f778cc31 444 Gene3D G3DSA:3.40.50.12240 20 444 7.8E-157 T 14-10-2018 D172_013415 9c5eda4959727802e3cbf4d2f778cc31 444 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 14 441 8.3E-180 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_013415 9c5eda4959727802e3cbf4d2f778cc31 444 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 361 1.1E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_010100 7b6f9da585477d7247b438e4e7952631 267 SUPERFAMILY SSF55486 100 257 1.03E-5 T 14-10-2018 D172_010100 7b6f9da585477d7247b438e4e7952631 267 Pfam PF05299 M61 glycyl aminopeptidase 123 185 1.4E-8 T 14-10-2018 IPR007963 Peptidase M61, catalytic domain D172_010100 7b6f9da585477d7247b438e4e7952631 267 Gene3D G3DSA:1.10.390.60 119 252 2.8E-11 T 14-10-2018 D172_006925 ec5fc6f8116cda21523ac81a4d4c6925 255 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 188 208 3.1E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_006925 ec5fc6f8116cda21523ac81a4d4c6925 255 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 170 186 3.1E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_006925 ec5fc6f8116cda21523ac81a4d4c6925 255 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 215 228 3.1E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_006925 ec5fc6f8116cda21523ac81a4d4c6925 255 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 152 3.1E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_006925 ec5fc6f8116cda21523ac81a4d4c6925 255 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 36 47 3.1E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_006925 ec5fc6f8116cda21523ac81a4d4c6925 255 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 37 231 2.6E-54 T 14-10-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 D172_006925 ec5fc6f8116cda21523ac81a4d4c6925 255 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 39 218 1.2E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_006925 ec5fc6f8116cda21523ac81a4d4c6925 255 Pfam PF13419 Haloacid dehalogenase-like hydrolase 40 224 2.7E-18 T 14-10-2018 D172_006925 ec5fc6f8116cda21523ac81a4d4c6925 255 SUPERFAMILY SSF56784 35 250 1.01E-48 T 14-10-2018 IPR036412 HAD-like superfamily D172_006925 ec5fc6f8116cda21523ac81a4d4c6925 255 Gene3D G3DSA:3.40.50.1000 39 250 5.4E-69 T 14-10-2018 IPR023214 HAD superfamily D172_006925 ec5fc6f8116cda21523ac81a4d4c6925 255 Gene3D G3DSA:1.10.150.240 50 124 5.4E-69 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D172_005000 aaeeb4128a470bfe670db990260aa75d 654 Pfam PF02333 Phytase 325 652 1.7E-77 T 14-10-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 D172_005000 aaeeb4128a470bfe670db990260aa75d 654 SUPERFAMILY SSF50956 331 653 1.57E-66 T 14-10-2018 D172_005000 aaeeb4128a470bfe670db990260aa75d 654 Gene3D G3DSA:2.120.10.30 59 312 1.2E-16 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_005000 aaeeb4128a470bfe670db990260aa75d 654 SUPERFAMILY SSF50956 58 274 2.75E-22 T 14-10-2018 D172_005000 aaeeb4128a470bfe670db990260aa75d 654 Gene3D G3DSA:2.120.10.30 325 654 3.3E-112 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_015700 df6f5034208b9903eb22d8f4de314d07 171 Pfam PF02357 Transcription termination factor nusG 6 99 1.0E-13 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D172_015700 df6f5034208b9903eb22d8f4de314d07 171 SUPERFAMILY SSF82679 5 104 4.32E-19 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D172_015700 df6f5034208b9903eb22d8f4de314d07 171 SMART SM00738 4 103 7.3E-5 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D172_015700 df6f5034208b9903eb22d8f4de314d07 171 Gene3D G3DSA:3.30.70.940 5 167 2.9E-31 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 D172_009450 1a781cabc5d8822d0f7aae1f482480df 249 Gene3D G3DSA:1.10.10.60 150 192 3.0E-9 T 14-10-2018 D172_009450 1a781cabc5d8822d0f7aae1f482480df 249 SUPERFAMILY SSF51215 2 121 3.92E-5 T 14-10-2018 IPR037923 Transcription regulator HTH-like D172_009450 1a781cabc5d8822d0f7aae1f482480df 249 SMART SM00342 160 243 8.4E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_009450 1a781cabc5d8822d0f7aae1f482480df 249 Gene3D G3DSA:1.10.10.60 193 248 3.3E-16 T 14-10-2018 D172_009450 1a781cabc5d8822d0f7aae1f482480df 249 SUPERFAMILY SSF46689 149 194 2.78E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_009450 1a781cabc5d8822d0f7aae1f482480df 249 Pfam PF12833 Helix-turn-helix domain 168 245 5.3E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_009450 1a781cabc5d8822d0f7aae1f482480df 249 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 212 227 1.6E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D172_009450 1a781cabc5d8822d0f7aae1f482480df 249 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 243 1.6E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D172_009450 1a781cabc5d8822d0f7aae1f482480df 249 SUPERFAMILY SSF46689 197 247 1.97E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 SMART SM00052 740 985 2.5E-123 T 14-10-2018 IPR001633 EAL domain D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 Gene3D G3DSA:1.20.1480.50 338 434 4.5E-8 T 14-10-2018 D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 Pfam PF02743 Cache domain 135 337 2.8E-17 T 14-10-2018 IPR033479 Double Cache domain 1 D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 565 728 2.9E-45 T 14-10-2018 IPR000160 GGDEF domain D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 Gene3D G3DSA:3.20.20.450 743 992 1.0E-100 T 14-10-2018 IPR035919 EAL domain superfamily D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 SUPERFAMILY SSF158472 378 427 7.72E-6 T 14-10-2018 D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 Pfam PF00563 EAL domain 746 980 4.2E-77 T 14-10-2018 IPR001633 EAL domain D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 SUPERFAMILY SSF55073 574 732 3.69E-51 T 14-10-2018 IPR029787 Nucleotide cyclase D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 Gene3D G3DSA:3.30.450.20 50 244 7.1E-11 T 14-10-2018 D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 SUPERFAMILY SSF141868 745 990 2.35E-92 T 14-10-2018 IPR035919 EAL domain superfamily D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 SMART SM00267 558 730 1.1E-63 T 14-10-2018 IPR000160 GGDEF domain D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 Pfam PF00672 HAMP domain 378 424 3.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 Gene3D G3DSA:3.30.450.20 439 561 2.4E-19 T 14-10-2018 D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 Pfam PF13426 PAS domain 456 556 1.3E-10 T 14-10-2018 IPR000014 PAS domain D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 Pfam PF00990 Diguanylate cyclase, GGDEF domain 569 726 3.6E-49 T 14-10-2018 IPR000160 GGDEF domain D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 SUPERFAMILY SSF55785 434 556 2.66E-16 T 14-10-2018 IPR035965 PAS domain superfamily D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 Gene3D G3DSA:3.30.70.270 563 742 1.2E-60 T 14-10-2018 D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 SMART SM00304 376 428 4.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_005610 1f2f7fa33f9a603a2ab17387625d0b84 1005 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 446 564 1.6E-10 T 14-10-2018 IPR000014 PAS domain D172_002785 e7363ee9630fcd5a132e57d31f024c91 186 Gene3D G3DSA:3.40.50.1820 1 186 6.5E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_002785 e7363ee9630fcd5a132e57d31f024c91 186 SUPERFAMILY SSF53474 5 183 3.34E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_002785 e7363ee9630fcd5a132e57d31f024c91 186 Pfam PF05728 Uncharacterised protein family (UPF0227) 5 183 2.5E-48 T 14-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA D172_003135 1ec7fd6eea734f2311aefe252393b3c6 333 SUPERFAMILY SSF51905 3 324 1.49E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_003135 1ec7fd6eea734f2311aefe252393b3c6 333 Gene3D G3DSA:3.30.9.10 88 294 7.2E-46 T 14-10-2018 D172_003135 1ec7fd6eea734f2311aefe252393b3c6 333 SUPERFAMILY SSF54373 204 293 1.57E-16 T 14-10-2018 D172_003135 1ec7fd6eea734f2311aefe252393b3c6 333 Gene3D G3DSA:3.50.50.60 5 325 7.2E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_003135 1ec7fd6eea734f2311aefe252393b3c6 333 Pfam PF01266 FAD dependent oxidoreductase 5 326 1.6E-35 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 D172_010855 424e7e70b0f2bb0206c18d3aeb02ffd8 352 Gene3D G3DSA:3.40.50.10740 2 162 2.2E-37 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal D172_010855 424e7e70b0f2bb0206c18d3aeb02ffd8 352 SUPERFAMILY SSF52317 2 157 4.39E-33 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_010855 424e7e70b0f2bb0206c18d3aeb02ffd8 352 PIRSF PIRSF028757 4 348 1.6E-57 T 14-10-2018 IPR003507 Peptidase family S66 D172_010855 424e7e70b0f2bb0206c18d3aeb02ffd8 352 Gene3D G3DSA:3.50.30.60 167 347 2.9E-31 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily D172_010855 424e7e70b0f2bb0206c18d3aeb02ffd8 352 Pfam PF02016 LD-carboxypeptidase 16 333 4.7E-60 T 14-10-2018 IPR003507 Peptidase family S66 D172_010855 424e7e70b0f2bb0206c18d3aeb02ffd8 352 SUPERFAMILY SSF141986 198 335 1.06E-23 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily D172_006205 5b2a6a099a749f91732eea46eea97c38 245 Pfam PF11306 Protein of unknown function (DUF3108) 15 211 5.2E-18 T 14-10-2018 IPR021457 Protein of unknown function DUF3108 D172_012930 dd6c4f417ee45a4a70c54ea18694e0d6 314 Pfam PF01882 Protein of unknown function DUF58 60 144 1.8E-21 T 14-10-2018 IPR002881 Domain of unknown function DUF58 D172_012930 dd6c4f417ee45a4a70c54ea18694e0d6 314 SUPERFAMILY SSF53300 96 242 9.45E-7 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily D172_017535 03100d477bb57fa6f9b7a877fac047be 426 Pfam PF00691 OmpA family 320 418 7.8E-15 T 14-10-2018 IPR006665 OmpA-like domain D172_017535 03100d477bb57fa6f9b7a877fac047be 426 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 289 424 3.3E-45 T 14-10-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain D172_017535 03100d477bb57fa6f9b7a877fac047be 426 Pfam PF09850 Type VI secretion system protein DotU 53 254 8.2E-58 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU D172_017535 03100d477bb57fa6f9b7a877fac047be 426 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 52 259 2.8E-63 T 14-10-2018 IPR017732 Type IV / VI secretion system, DotU D172_017535 03100d477bb57fa6f9b7a877fac047be 426 Gene3D G3DSA:1.25.40.590 50 207 7.4E-49 T 14-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily D172_017535 03100d477bb57fa6f9b7a877fac047be 426 Gene3D G3DSA:3.30.1330.60 274 425 4.4E-40 T 14-10-2018 IPR036737 OmpA-like domain superfamily D172_017535 03100d477bb57fa6f9b7a877fac047be 426 SUPERFAMILY SSF103088 309 424 3.14E-25 T 14-10-2018 IPR036737 OmpA-like domain superfamily D172_013695 03fc91f164d67e235f5e34c05614b8b3 544 Hamap MF_01227 CTP synthase [pyrG]. 3 540 50.611 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 D172_013695 03fc91f164d67e235f5e34c05614b8b3 544 Pfam PF00117 Glutamine amidotransferase class-I 301 534 3.7E-62 T 14-10-2018 IPR017926 Glutamine amidotransferase D172_013695 03fc91f164d67e235f5e34c05614b8b3 544 SUPERFAMILY SSF52317 289 537 1.74E-86 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_013695 03fc91f164d67e235f5e34c05614b8b3 544 Gene3D G3DSA:3.40.50.300 1 285 5.5E-132 T 14-10-2018 D172_013695 03fc91f164d67e235f5e34c05614b8b3 544 Gene3D G3DSA:3.40.50.880 286 544 1.2E-106 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_013695 03fc91f164d67e235f5e34c05614b8b3 544 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 6.9E-255 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 D172_013695 03fc91f164d67e235f5e34c05614b8b3 544 Pfam PF06418 CTP synthase N-terminus 4 266 8.4E-124 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 D172_013695 03fc91f164d67e235f5e34c05614b8b3 544 SUPERFAMILY SSF52540 3 269 4.18E-120 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006415 4bde200392e1cb4ccefe9fcb8289fa58 471 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 2.2E-153 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_006415 4bde200392e1cb4ccefe9fcb8289fa58 471 PRINTS PR00175 Sodium/alanine symporter signature 206 225 9.4E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_006415 4bde200392e1cb4ccefe9fcb8289fa58 471 PRINTS PR00175 Sodium/alanine symporter signature 303 321 9.4E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_006415 4bde200392e1cb4ccefe9fcb8289fa58 471 PRINTS PR00175 Sodium/alanine symporter signature 410 430 9.4E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_006415 4bde200392e1cb4ccefe9fcb8289fa58 471 PRINTS PR00175 Sodium/alanine symporter signature 87 109 9.4E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_006415 4bde200392e1cb4ccefe9fcb8289fa58 471 PRINTS PR00175 Sodium/alanine symporter signature 178 196 9.4E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_006415 4bde200392e1cb4ccefe9fcb8289fa58 471 PRINTS PR00175 Sodium/alanine symporter signature 349 371 9.4E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_006415 4bde200392e1cb4ccefe9fcb8289fa58 471 Pfam PF01235 Sodium:alanine symporter family 49 449 2.0E-157 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_020620 33c0b83e8e389e4ff220460b34744e2c 603 SUPERFAMILY SSF51445 12 411 1.04E-87 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_020620 33c0b83e8e389e4ff220460b34744e2c 603 SUPERFAMILY SSF52279 413 599 1.1E-7 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 D172_020620 33c0b83e8e389e4ff220460b34744e2c 603 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 14 373 1.0E-89 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_020620 33c0b83e8e389e4ff220460b34744e2c 603 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 285 302 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 D172_020620 33c0b83e8e389e4ff220460b34744e2c 603 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 413 600 1.4E-9 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 D172_020620 33c0b83e8e389e4ff220460b34744e2c 603 Gene3D G3DSA:3.40.50.1700 398 603 1.9E-35 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 D172_020620 33c0b83e8e389e4ff220460b34744e2c 603 Gene3D G3DSA:3.20.20.300 9 395 4.4E-121 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 D172_021090 b78907bc98adbfe7710e9f76e0963d6a 99 Pfam PF08281 Sigma-70, region 4 40 88 5.6E-16 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_021090 b78907bc98adbfe7710e9f76e0963d6a 99 Gene3D G3DSA:1.10.10.10 21 97 7.9E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_021090 b78907bc98adbfe7710e9f76e0963d6a 99 SUPERFAMILY SSF88659 13 96 2.24E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_021090 b78907bc98adbfe7710e9f76e0963d6a 99 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 91 3.7E-15 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D172_004765 5dfad300d67f66da691b0fd345edce02 450 SMART SM00924 36 139 4.5E-12 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain D172_004765 5dfad300d67f66da691b0fd345edce02 450 Pfam PF01769 Divalent cation transporter 321 442 3.6E-26 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 D172_004765 5dfad300d67f66da691b0fd345edce02 450 SUPERFAMILY SSF158791 27 135 1.01E-10 T 14-10-2018 D172_004765 5dfad300d67f66da691b0fd345edce02 450 SUPERFAMILY SSF54631 153 274 7.96E-13 T 14-10-2018 D172_004765 5dfad300d67f66da691b0fd345edce02 450 Gene3D G3DSA:1.10.357.20 275 449 1.6E-46 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain D172_004765 5dfad300d67f66da691b0fd345edce02 450 Pfam PF03448 MgtE intracellular N domain 39 137 2.4E-14 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain D172_004765 5dfad300d67f66da691b0fd345edce02 450 Gene3D G3DSA:3.10.580.10 136 260 4.2E-32 T 14-10-2018 D172_004765 5dfad300d67f66da691b0fd345edce02 450 SUPERFAMILY SSF161093 278 449 8.5E-47 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 D172_010975 04c8cafdb88f778af6082075642b18f2 112 SUPERFAMILY SSF52833 1 102 3.51E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_010975 04c8cafdb88f778af6082075642b18f2 112 Pfam PF00462 Glutaredoxin 16 80 1.6E-17 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 D172_010975 04c8cafdb88f778af6082075642b18f2 112 PIRSF PIRSF005894 1 107 3.6E-50 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 D172_010975 04c8cafdb88f778af6082075642b18f2 112 Gene3D G3DSA:3.40.30.10 2 107 3.3E-31 T 14-10-2018 D172_010975 04c8cafdb88f778af6082075642b18f2 112 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 6.8E-45 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related D172_001770 f6291880e13bd303356d6df80fe492d9 415 Gene3D G3DSA:3.40.309.10 224 372 3.5E-153 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D172_001770 f6291880e13bd303356d6df80fe492d9 415 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 404 2.6E-138 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D172_001770 f6291880e13bd303356d6df80fe492d9 415 PIRSF PIRSF000151 1 415 7.6E-166 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 D172_001770 f6291880e13bd303356d6df80fe492d9 415 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 342 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D172_001770 f6291880e13bd303356d6df80fe492d9 415 SUPERFAMILY SSF53720 5 414 2.49E-107 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D172_001770 f6291880e13bd303356d6df80fe492d9 415 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 39.186 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D172_001770 f6291880e13bd303356d6df80fe492d9 415 Gene3D G3DSA:3.40.605.10 16 409 3.5E-153 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D172_001770 f6291880e13bd303356d6df80fe492d9 415 Pfam PF00171 Aldehyde dehydrogenase family 7 276 3.8E-14 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D172_011840 d3221b5593457fc3342e85fee134605c 132 Pfam PF13781 DoxX-like family 18 117 6.6E-21 T 14-10-2018 IPR025695 DoxX-like family D172_004610 3c2e941cb7538050ed817deb75591f47 233 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 223 9.0E-70 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 D172_004610 3c2e941cb7538050ed817deb75591f47 233 Gene3D G3DSA:3.90.550.10 1 230 9.7E-71 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_004610 3c2e941cb7538050ed817deb75591f47 233 SUPERFAMILY SSF53448 7 224 2.5E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_004610 3c2e941cb7538050ed817deb75591f47 233 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 6 224 41.153 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 D172_004610 3c2e941cb7538050ed817deb75591f47 233 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 225 7.3E-70 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 D172_004610 3c2e941cb7538050ed817deb75591f47 233 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 D172_007550 f9cd5cfc549a86ecc72565ce1d5ab4dc 485 Gene3D G3DSA:3.30.420.40 244 485 2.0E-76 T 14-10-2018 D172_007550 f9cd5cfc549a86ecc72565ce1d5ab4dc 485 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 242 8.8E-75 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 D172_007550 f9cd5cfc549a86ecc72565ce1d5ab4dc 485 Gene3D G3DSA:3.30.420.40 1 243 4.7E-85 T 14-10-2018 D172_007550 f9cd5cfc549a86ecc72565ce1d5ab4dc 485 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 252 438 1.4E-31 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 D172_007550 f9cd5cfc549a86ecc72565ce1d5ab4dc 485 SUPERFAMILY SSF53067 244 484 1.59E-57 T 14-10-2018 D172_007550 f9cd5cfc549a86ecc72565ce1d5ab4dc 485 SUPERFAMILY SSF53067 2 245 4.32E-69 T 14-10-2018 D172_007550 f9cd5cfc549a86ecc72565ce1d5ab4dc 485 PIRSF PIRSF000538 1 485 4.9E-133 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 D172_007550 f9cd5cfc549a86ecc72565ce1d5ab4dc 485 TIGRFAM TIGR01312 XylB: xylulokinase 3 479 3.9E-175 T 14-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 D172_000730 d0b1456fb050ee8ff9601e5d4b1cfdfe 367 Gene3D G3DSA:1.25.40.10 28 242 3.2E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_000730 d0b1456fb050ee8ff9601e5d4b1cfdfe 367 Gene3D G3DSA:2.40.70.10 243 366 3.1E-22 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily D172_000730 d0b1456fb050ee8ff9601e5d4b1cfdfe 367 Pfam PF13975 gag-polyprotein putative aspartyl protease 259 350 1.9E-16 T 14-10-2018 D172_000730 d0b1456fb050ee8ff9601e5d4b1cfdfe 367 Pfam PF14559 Tetratricopeptide repeat 188 238 5.3E-6 T 14-10-2018 D172_000730 d0b1456fb050ee8ff9601e5d4b1cfdfe 367 SUPERFAMILY SSF50630 253 356 8.6E-15 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily D172_000730 d0b1456fb050ee8ff9601e5d4b1cfdfe 367 SUPERFAMILY SSF48452 44 221 9.73E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_000730 d0b1456fb050ee8ff9601e5d4b1cfdfe 367 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 271 282 - T 14-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 D172_004475 cc4accd62970c767f80ec503d4fa1d48 255 Pfam PF01026 TatD related DNase 4 243 1.2E-57 T 14-10-2018 IPR001130 TatD family GO:0016788 D172_004475 cc4accd62970c767f80ec503d4fa1d48 255 SUPERFAMILY SSF51556 3 253 1.16E-67 T 14-10-2018 IPR032466 Metal-dependent hydrolase D172_004475 cc4accd62970c767f80ec503d4fa1d48 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 D172_004475 cc4accd62970c767f80ec503d4fa1d48 255 PIRSF PIRSF005902 1 254 9.1E-63 T 14-10-2018 IPR001130 TatD family GO:0016788 D172_004475 cc4accd62970c767f80ec503d4fa1d48 255 Gene3D G3DSA:3.20.20.140 1 255 1.7E-74 T 14-10-2018 D172_000545 1fbc582829865361e710ec76c6c71008 515 Pfam PF03703 Bacterial PH domain 79 159 2.4E-11 T 14-10-2018 IPR005182 Domain of unknown function DUF304 D172_000545 1fbc582829865361e710ec76c6c71008 515 Pfam PF03703 Bacterial PH domain 286 353 2.3E-4 T 14-10-2018 IPR005182 Domain of unknown function DUF304 D172_000545 1fbc582829865361e710ec76c6c71008 515 PIRSF PIRSF026631 28 514 3.6E-50 T 14-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 D172_014380 732892360cedb3de381dc00ee8a70cbc 122 Pfam PF00072 Response regulator receiver domain 6 115 2.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_014380 732892360cedb3de381dc00ee8a70cbc 122 SUPERFAMILY SSF52172 4 119 3.84E-28 T 14-10-2018 IPR011006 CheY-like superfamily D172_014380 732892360cedb3de381dc00ee8a70cbc 122 SMART SM00448 4 116 3.1E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_014380 732892360cedb3de381dc00ee8a70cbc 122 Gene3D G3DSA:3.40.50.2300 2 120 1.4E-26 T 14-10-2018 D172_008150 969a351d854c5fe7172eebb4984a0d89 221 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 216 9.8E-47 T 14-10-2018 IPR006214 Bax inhibitor 1-related D172_012635 b0cc5b07a2acb8a574119a261e6f5e79 823 Pfam PF07244 Surface antigen variable number repeat 93 173 6.8E-10 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 D172_012635 b0cc5b07a2acb8a574119a261e6f5e79 823 Pfam PF07244 Surface antigen variable number repeat 267 345 6.4E-10 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 D172_012635 b0cc5b07a2acb8a574119a261e6f5e79 823 Pfam PF07244 Surface antigen variable number repeat 348 422 3.6E-9 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 D172_012635 b0cc5b07a2acb8a574119a261e6f5e79 823 Pfam PF07244 Surface antigen variable number repeat 177 264 1.6E-11 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 D172_012635 b0cc5b07a2acb8a574119a261e6f5e79 823 PIRSF PIRSF006076 1 823 3.8E-233 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 D172_012635 b0cc5b07a2acb8a574119a261e6f5e79 823 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 3 823 23.503 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 D172_012635 b0cc5b07a2acb8a574119a261e6f5e79 823 Gene3D G3DSA:3.10.20.310 265 346 2.2E-15 T 14-10-2018 D172_012635 b0cc5b07a2acb8a574119a261e6f5e79 823 Gene3D G3DSA:2.40.160.50 427 823 2.7E-109 T 14-10-2018 D172_012635 b0cc5b07a2acb8a574119a261e6f5e79 823 Gene3D G3DSA:3.10.20.310 20 92 6.0E-16 T 14-10-2018 D172_012635 b0cc5b07a2acb8a574119a261e6f5e79 823 Gene3D G3DSA:3.10.20.310 347 422 3.4E-20 T 14-10-2018 D172_012635 b0cc5b07a2acb8a574119a261e6f5e79 823 Pfam PF01103 Surface antigen 449 823 5.5E-76 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 D172_012635 b0cc5b07a2acb8a574119a261e6f5e79 823 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 25 823 1.7E-265 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 D172_012635 b0cc5b07a2acb8a574119a261e6f5e79 823 Gene3D G3DSA:3.10.20.310 93 173 1.7E-15 T 14-10-2018 D172_012635 b0cc5b07a2acb8a574119a261e6f5e79 823 Gene3D G3DSA:3.10.20.310 176 264 1.5E-20 T 14-10-2018 D172_016945 bd467687ef1aa82b3056839c884c80bb 246 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 226 3.8E-69 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D172_016945 bd467687ef1aa82b3056839c884c80bb 246 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 239 15.539 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D172_016945 bd467687ef1aa82b3056839c884c80bb 246 ProSitePatterns PS01218 TatC family signature. 154 173 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site D172_016945 bd467687ef1aa82b3056839c884c80bb 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 1.3E-44 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D172_016945 bd467687ef1aa82b3056839c884c80bb 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 1.3E-44 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D172_016945 bd467687ef1aa82b3056839c884c80bb 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 1.3E-44 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D172_016945 bd467687ef1aa82b3056839c884c80bb 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 1.3E-44 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D172_016945 bd467687ef1aa82b3056839c884c80bb 246 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 4.4E-64 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 D172_005810 11fdc303191540613203426f74e2cd2e 907 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 9.9E-32 T 14-10-2018 IPR011765 Peptidase M16, N-terminal D172_005810 11fdc303191540613203426f74e2cd2e 907 SUPERFAMILY SSF63411 472 695 9.16E-49 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D172_005810 11fdc303191540613203426f74e2cd2e 907 SUPERFAMILY SSF63411 4 225 7.13E-56 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D172_005810 11fdc303191540613203426f74e2cd2e 907 Pfam PF05193 Peptidase M16 inactive domain 182 343 1.6E-15 T 14-10-2018 IPR007863 Peptidase M16, C-terminal D172_005810 11fdc303191540613203426f74e2cd2e 907 Pfam PF05193 Peptidase M16 inactive domain 652 787 1.7E-5 T 14-10-2018 IPR007863 Peptidase M16, C-terminal D172_005810 11fdc303191540613203426f74e2cd2e 907 Gene3D G3DSA:3.30.830.10 620 874 4.8E-94 T 14-10-2018 D172_005810 11fdc303191540613203426f74e2cd2e 907 Gene3D G3DSA:3.30.830.10 240 469 4.9E-63 T 14-10-2018 D172_005810 11fdc303191540613203426f74e2cd2e 907 Gene3D G3DSA:3.30.830.10 1 236 2.2E-79 T 14-10-2018 D172_005810 11fdc303191540613203426f74e2cd2e 907 SUPERFAMILY SSF63411 702 886 1.28E-37 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D172_005810 11fdc303191540613203426f74e2cd2e 907 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 D172_005810 11fdc303191540613203426f74e2cd2e 907 Pfam PF16187 Middle or third domain of peptidase_M16 367 643 3.4E-67 T 14-10-2018 IPR032632 Peptidase M16, middle/third domain D172_005810 11fdc303191540613203426f74e2cd2e 907 Gene3D G3DSA:3.30.830.10 472 851 4.8E-94 T 14-10-2018 D172_005810 11fdc303191540613203426f74e2cd2e 907 SUPERFAMILY SSF63411 232 470 2.62E-68 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D172_007665 4dabd87755e2bfdd228ac340b35bb6ff 480 Pfam PF00884 Sulfatase 30 354 1.4E-76 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 D172_007665 4dabd87755e2bfdd228ac340b35bb6ff 480 Gene3D G3DSA:3.30.1120.10 406 447 1.0E-5 T 14-10-2018 D172_007665 4dabd87755e2bfdd228ac340b35bb6ff 480 SUPERFAMILY SSF53649 28 449 6.41E-131 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D172_007665 4dabd87755e2bfdd228ac340b35bb6ff 480 Gene3D G3DSA:3.40.720.10 27 403 1.5E-122 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 Gene3D G3DSA:3.30.54.20 615 668 1.6E-52 T 14-10-2018 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 Gene3D G3DSA:3.30.930.10 3 244 2.1E-115 T 14-10-2018 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 845 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 644 687 7.5E-20 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 SUPERFAMILY SSF55681 4 247 6.46E-111 T 14-10-2018 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 866 202.153 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 Gene3D G3DSA:3.10.310.40 756 863 2.3E-32 T 14-10-2018 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 SMART SM00863 644 687 7.0E-23 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 Gene3D G3DSA:3.30.980.10 553 688 1.6E-52 T 14-10-2018 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 SUPERFAMILY SSF50447 447 543 6.0E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 PRINTS PR00980 Alanyl-tRNA synthetase signature 77 88 4.2E-33 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 PRINTS PR00980 Alanyl-tRNA synthetase signature 228 241 4.2E-33 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 PRINTS PR00980 Alanyl-tRNA synthetase signature 201 212 4.2E-33 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 4.2E-33 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 4.2E-33 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 Gene3D G3DSA:2.40.30.130 441 543 1.8E-13 T 14-10-2018 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 SUPERFAMILY SSF55186 543 700 5.76E-52 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 Pfam PF01411 tRNA synthetases class II (A) 8 546 4.5E-228 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 SUPERFAMILY SSF101353 248 458 2.22E-63 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 D172_015045 466fa4370acbbb4c5c011d1cfdf80dc7 866 Pfam PF02272 DHHA1 domain 725 862 2.1E-29 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 D172_012560 b0eb417d7d5be1aba5e8080578b87e30 434 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 312 22.619 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D172_012560 b0eb417d7d5be1aba5e8080578b87e30 434 Pfam PF11734 TilS substrate C-terminal domain 363 426 5.7E-20 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D172_012560 b0eb417d7d5be1aba5e8080578b87e30 434 SMART SM00977 363 431 1.3E-18 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D172_012560 b0eb417d7d5be1aba5e8080578b87e30 434 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 26 208 2.3E-52 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D172_012560 b0eb417d7d5be1aba5e8080578b87e30 434 Gene3D G3DSA:3.40.50.620 14 238 1.5E-65 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_012560 b0eb417d7d5be1aba5e8080578b87e30 434 Gene3D G3DSA:1.20.59.20 240 323 7.6E-21 T 14-10-2018 D172_012560 b0eb417d7d5be1aba5e8080578b87e30 434 SUPERFAMILY SSF82829 243 324 2.09E-24 T 14-10-2018 D172_012560 b0eb417d7d5be1aba5e8080578b87e30 434 SUPERFAMILY SSF52402 25 237 3.31E-54 T 14-10-2018 D172_012560 b0eb417d7d5be1aba5e8080578b87e30 434 SUPERFAMILY SSF56037 342 426 5.75E-20 T 14-10-2018 D172_012560 b0eb417d7d5be1aba5e8080578b87e30 434 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 364 409 3.5E-8 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D172_012560 b0eb417d7d5be1aba5e8080578b87e30 434 Pfam PF01171 PP-loop family 26 204 5.2E-54 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 D172_012560 b0eb417d7d5be1aba5e8080578b87e30 434 Pfam PF09179 TilS substrate binding domain 253 320 4.9E-16 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 D172_002305 603e19d9b08b22e1dad7d1aa74025775 215 Pfam PF01121 Dephospho-CoA kinase 16 191 2.5E-68 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 D172_002305 603e19d9b08b22e1dad7d1aa74025775 215 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 15 205 26.404 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 D172_002305 603e19d9b08b22e1dad7d1aa74025775 215 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 17 196 1.8E-60 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 D172_002305 603e19d9b08b22e1dad7d1aa74025775 215 Gene3D G3DSA:3.40.50.300 13 215 4.5E-66 T 14-10-2018 D172_002305 603e19d9b08b22e1dad7d1aa74025775 215 SUPERFAMILY SSF52540 17 202 8.72E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_017485 16e15b5db21d7a6f01239316990db9fa 706 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 508 670 4.4E-43 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_017485 16e15b5db21d7a6f01239316990db9fa 706 Gene3D G3DSA:3.30.450.20 62 331 3.1E-36 T 14-10-2018 D172_017485 16e15b5db21d7a6f01239316990db9fa 706 Gene3D G3DSA:1.10.287.950 375 706 4.4E-65 T 14-10-2018 D172_017485 16e15b5db21d7a6f01239316990db9fa 706 Gene3D G3DSA:3.30.450.20 73 234 3.1E-36 T 14-10-2018 D172_017485 16e15b5db21d7a6f01239316990db9fa 706 SUPERFAMILY SSF58104 397 705 5.89E-69 T 14-10-2018 D172_017485 16e15b5db21d7a6f01239316990db9fa 706 SMART SM00304 375 429 2.8E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_017485 16e15b5db21d7a6f01239316990db9fa 706 SMART SM00283 440 705 9.6E-55 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_012180 e98b944b400c2cf8330847b412b03dff 253 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 18 172 25.126 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 D172_012180 e98b944b400c2cf8330847b412b03dff 253 Pfam PF05036 Sporulation related domain 183 250 5.2E-10 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 D172_012180 e98b944b400c2cf8330847b412b03dff 253 SUPERFAMILY SSF50685 78 170 4.19E-12 T 14-10-2018 IPR036908 RlpA-like domain superfamily D172_012180 e98b944b400c2cf8330847b412b03dff 253 Pfam PF03330 Lytic transglycolase 80 168 4.2E-27 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain D172_012180 e98b944b400c2cf8330847b412b03dff 253 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 82 245 2.1E-47 T 14-10-2018 IPR012997 Rare lipoprotein A D172_012180 e98b944b400c2cf8330847b412b03dff 253 Gene3D G3DSA:2.40.40.10 79 173 7.6E-38 T 14-10-2018 IPR036908 RlpA-like domain superfamily D172_012180 e98b944b400c2cf8330847b412b03dff 253 SUPERFAMILY SSF110997 182 251 8.63E-12 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D172_012180 e98b944b400c2cf8330847b412b03dff 253 Gene3D G3DSA:3.30.70.1070 182 251 2.2E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D172_013590 f0bcd6c699f51d5ec85343d104e5af7c 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 3.1E-36 T 14-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 D172_013590 f0bcd6c699f51d5ec85343d104e5af7c 242 Gene3D G3DSA:3.40.30.10 5 165 2.0E-63 T 14-10-2018 D172_013590 f0bcd6c699f51d5ec85343d104e5af7c 242 SUPERFAMILY SSF52833 6 240 1.57E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_013590 f0bcd6c699f51d5ec85343d104e5af7c 242 Pfam PF00462 Glutaredoxin 173 231 9.9E-18 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 D172_013590 f0bcd6c699f51d5ec85343d104e5af7c 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 D172_013590 f0bcd6c699f51d5ec85343d104e5af7c 242 Pfam PF08534 Redoxin 6 160 4.7E-33 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 D172_013590 f0bcd6c699f51d5ec85343d104e5af7c 242 Gene3D G3DSA:3.40.30.10 172 242 5.4E-25 T 14-10-2018 D172_013590 f0bcd6c699f51d5ec85343d104e5af7c 242 PRINTS PR00160 Glutaredoxin signature 173 191 4.3E-16 T 14-10-2018 IPR014025 Glutaredoxin subgroup D172_013590 f0bcd6c699f51d5ec85343d104e5af7c 242 PRINTS PR00160 Glutaredoxin signature 228 241 4.3E-16 T 14-10-2018 IPR014025 Glutaredoxin subgroup D172_013590 f0bcd6c699f51d5ec85343d104e5af7c 242 PRINTS PR00160 Glutaredoxin signature 214 227 4.3E-16 T 14-10-2018 IPR014025 Glutaredoxin subgroup D172_002800 1009a55b4812fa6b29ec4e1542b12c58 764 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 601 644 0.011 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D172_002800 1009a55b4812fa6b29ec4e1542b12c58 764 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 697 9.2E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D172_002800 1009a55b4812fa6b29ec4e1542b12c58 764 SMART SM00434 15 465 2.7E-225 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D172_002800 1009a55b4812fa6b29ec4e1542b12c58 764 Gene3D G3DSA:1.10.268.10 373 458 9.2E-176 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D172_002800 1009a55b4812fa6b29ec4e1542b12c58 764 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 470 1.8E-133 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D172_002800 1009a55b4812fa6b29ec4e1542b12c58 764 Gene3D G3DSA:3.30.1360.40 242 335 9.2E-176 T 14-10-2018 D172_002800 1009a55b4812fa6b29ec4e1542b12c58 764 SUPERFAMILY SSF101904 501 757 2.09E-52 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal D172_002800 1009a55b4812fa6b29ec4e1542b12c58 764 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 32.995 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_002800 1009a55b4812fa6b29ec4e1542b12c58 764 Gene3D G3DSA:2.120.10.90 499 756 6.0E-11 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal D172_002800 1009a55b4812fa6b29ec4e1542b12c58 764 Gene3D G3DSA:3.90.199.10 36 485 9.2E-176 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 D172_002800 1009a55b4812fa6b29ec4e1542b12c58 764 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 745 0.0 T 14-10-2018 D172_002800 1009a55b4812fa6b29ec4e1542b12c58 764 SUPERFAMILY SSF56719 35 487 1.96E-153 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D172_015345 f2c49b1a8d292e7784b0b6f30b275cf5 470 SUPERFAMILY SSF53738 244 371 2.16E-6 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_015345 f2c49b1a8d292e7784b0b6f30b275cf5 470 SUPERFAMILY SSF53738 158 258 6.28E-15 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_015345 f2c49b1a8d292e7784b0b6f30b275cf5 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 416 460 6.1E-6 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_015345 f2c49b1a8d292e7784b0b6f30b275cf5 470 SUPERFAMILY SSF55957 413 462 3.01E-10 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_015345 f2c49b1a8d292e7784b0b6f30b275cf5 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 7.2E-12 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_015345 f2c49b1a8d292e7784b0b6f30b275cf5 470 Gene3D G3DSA:3.40.120.10 4 155 9.1E-39 T 14-10-2018 D172_015345 f2c49b1a8d292e7784b0b6f30b275cf5 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 262 359 2.5E-8 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_015345 f2c49b1a8d292e7784b0b6f30b275cf5 470 Gene3D G3DSA:3.40.120.10 176 256 8.9E-33 T 14-10-2018 D172_015345 f2c49b1a8d292e7784b0b6f30b275cf5 470 Gene3D G3DSA:3.30.310.50 375 468 2.6E-23 T 14-10-2018 D172_015345 f2c49b1a8d292e7784b0b6f30b275cf5 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 13 134 2.0E-24 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_015345 f2c49b1a8d292e7784b0b6f30b275cf5 470 SUPERFAMILY SSF53738 10 137 1.06E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 D172_015345 f2c49b1a8d292e7784b0b6f30b275cf5 470 Gene3D G3DSA:3.40.120.10 257 374 6.2E-38 T 14-10-2018 D172_013050 655aa0e38c6740102ef01d62cc473799 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 7.3E-34 T 14-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 D172_013050 655aa0e38c6740102ef01d62cc473799 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 1.0E-40 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 D172_013050 655aa0e38c6740102ef01d62cc473799 98 SUPERFAMILY SSF75471 1 94 9.55E-28 T 14-10-2018 IPR035920 YhbY-like superfamily D172_013050 655aa0e38c6740102ef01d62cc473799 98 Gene3D G3DSA:3.30.110.60 1 98 4.3E-33 T 14-10-2018 IPR035920 YhbY-like superfamily D172_013050 655aa0e38c6740102ef01d62cc473799 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 85 3.4E-19 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 D172_013050 655aa0e38c6740102ef01d62cc473799 98 SMART SM01103 3 86 1.4E-37 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 D172_016810 74a1fe90053dbde071ab548912de5a4c 330 Gene3D G3DSA:2.30.30.100 280 329 2.6E-14 T 14-10-2018 D172_016810 74a1fe90053dbde071ab548912de5a4c 330 SUPERFAMILY SSF55681 86 277 5.09E-56 T 14-10-2018 D172_016810 74a1fe90053dbde071ab548912de5a4c 330 Gene3D G3DSA:1.10.10.10 5 64 1.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_016810 74a1fe90053dbde071ab548912de5a4c 330 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 326 31.631 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 D172_016810 74a1fe90053dbde071ab548912de5a4c 330 SUPERFAMILY SSF46785 6 61 2.18E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_016810 74a1fe90053dbde071ab548912de5a4c 330 Pfam PF03099 Biotin/lipoate A/B protein ligase family 92 217 1.3E-18 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 D172_016810 74a1fe90053dbde071ab548912de5a4c 330 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 87 326 2.2E-60 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D172_016810 74a1fe90053dbde071ab548912de5a4c 330 Pfam PF08279 HTH domain 9 59 4.8E-14 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 D172_016810 74a1fe90053dbde071ab548912de5a4c 330 SUPERFAMILY SSF50037 281 326 1.14E-8 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal D172_016810 74a1fe90053dbde071ab548912de5a4c 330 Pfam PF02237 Biotin protein ligase C terminal domain 285 326 1.1E-5 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D172_016810 74a1fe90053dbde071ab548912de5a4c 330 Gene3D G3DSA:3.30.930.10 69 279 1.2E-63 T 14-10-2018 D172_007520 1a5b64a44ae166cec5e0cf9965e46f0a 379 PRINTS PR00134 Glycosyl hydrolase family 10 signature 162 173 1.1E-17 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007520 1a5b64a44ae166cec5e0cf9965e46f0a 379 PRINTS PR00134 Glycosyl hydrolase family 10 signature 234 246 1.1E-17 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007520 1a5b64a44ae166cec5e0cf9965e46f0a 379 PRINTS PR00134 Glycosyl hydrolase family 10 signature 114 126 1.1E-17 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007520 1a5b64a44ae166cec5e0cf9965e46f0a 379 PRINTS PR00134 Glycosyl hydrolase family 10 signature 206 217 1.1E-17 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007520 1a5b64a44ae166cec5e0cf9965e46f0a 379 ProSitePatterns PS00591 Glycosyl hydrolases family 10 (GH10) active site. 268 278 - T 14-10-2018 IPR031158 Glycosyl hydrolases family 10, active site MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007520 1a5b64a44ae166cec5e0cf9965e46f0a 379 Pfam PF00331 Glycosyl hydrolase family 10 40 373 3.3E-105 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007520 1a5b64a44ae166cec5e0cf9965e46f0a 379 SMART SM00633 83 379 8.4E-97 T 14-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_007520 1a5b64a44ae166cec5e0cf9965e46f0a 379 Gene3D G3DSA:3.20.20.80 39 379 1.0E-119 T 14-10-2018 D172_007520 1a5b64a44ae166cec5e0cf9965e46f0a 379 SUPERFAMILY SSF51445 40 374 9.91E-104 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_016695 499b9ee1276f921ceb6ca840741face5 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 2 463 6.8E-240 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 D172_016695 499b9ee1276f921ceb6ca840741face5 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 2.5E-155 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_016695 499b9ee1276f921ceb6ca840741face5 466 Gene3D G3DSA:3.30.499.20 4 286 8.7E-98 T 14-10-2018 D172_016695 499b9ee1276f921ceb6ca840741face5 466 Gene3D G3DSA:3.30.499.10 325 465 8.3E-49 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 D172_016695 499b9ee1276f921ceb6ca840741face5 466 PRINTS PR00415 Aconitase family signature 399 412 1.5E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_016695 499b9ee1276f921ceb6ca840741face5 466 PRINTS PR00415 Aconitase family signature 119 132 1.5E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_016695 499b9ee1276f921ceb6ca840741face5 466 PRINTS PR00415 Aconitase family signature 82 95 1.5E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_016695 499b9ee1276f921ceb6ca840741face5 466 PRINTS PR00415 Aconitase family signature 286 300 1.5E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_016695 499b9ee1276f921ceb6ca840741face5 466 PRINTS PR00415 Aconitase family signature 133 148 1.5E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_016695 499b9ee1276f921ceb6ca840741face5 466 PRINTS PR00415 Aconitase family signature 195 208 1.5E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_016695 499b9ee1276f921ceb6ca840741face5 466 PRINTS PR00415 Aconitase family signature 343 354 1.5E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_016695 499b9ee1276f921ceb6ca840741face5 466 PRINTS PR00415 Aconitase family signature 108 116 1.5E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_016695 499b9ee1276f921ceb6ca840741face5 466 PRINTS PR00415 Aconitase family signature 209 222 1.5E-49 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_016695 499b9ee1276f921ceb6ca840741face5 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 D172_016695 499b9ee1276f921ceb6ca840741face5 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 58.755 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 D172_016695 499b9ee1276f921ceb6ca840741face5 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 D172_016695 499b9ee1276f921ceb6ca840741face5 466 SUPERFAMILY SSF53732 3 463 7.59E-164 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 D172_005640 78d57b04e966872e2057af38274bce77 388 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 1 360 1.3E-105 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D172_005640 78d57b04e966872e2057af38274bce77 388 PRINTS PR00166 Aromatic amino acid permease signature 162 184 4.4E-65 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D172_005640 78d57b04e966872e2057af38274bce77 388 PRINTS PR00166 Aromatic amino acid permease signature 201 220 4.4E-65 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D172_005640 78d57b04e966872e2057af38274bce77 388 PRINTS PR00166 Aromatic amino acid permease signature 128 148 4.4E-65 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D172_005640 78d57b04e966872e2057af38274bce77 388 PRINTS PR00166 Aromatic amino acid permease signature 292 310 4.4E-65 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D172_005640 78d57b04e966872e2057af38274bce77 388 PRINTS PR00166 Aromatic amino acid permease signature 17 36 4.4E-65 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D172_005640 78d57b04e966872e2057af38274bce77 388 PRINTS PR00166 Aromatic amino acid permease signature 62 82 4.4E-65 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D172_005640 78d57b04e966872e2057af38274bce77 388 PRINTS PR00166 Aromatic amino acid permease signature 313 332 4.4E-65 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D172_005640 78d57b04e966872e2057af38274bce77 388 PRINTS PR00166 Aromatic amino acid permease signature 258 277 4.4E-65 T 14-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 D172_005640 78d57b04e966872e2057af38274bce77 388 Pfam PF03222 Tryptophan/tyrosine permease family 1 367 4.7E-103 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 D172_014630 b259c923267d37c672dea37994bc0fe7 148 SUPERFAMILY SSF55961 8 145 4.76E-11 T 14-10-2018 D172_014630 b259c923267d37c672dea37994bc0fe7 148 Gene3D G3DSA:3.30.530.20 4 146 2.3E-5 T 14-10-2018 IPR023393 START-like domain superfamily D172_000605 83fb04da3da037f9ce1af8af4f840195 495 Gene3D G3DSA:3.30.565.10 332 493 3.6E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_000605 83fb04da3da037f9ce1af8af4f840195 495 SMART SM00388 265 333 1.4E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_000605 83fb04da3da037f9ce1af8af4f840195 495 SUPERFAMILY SSF55874 323 490 2.49E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_000605 83fb04da3da037f9ce1af8af4f840195 495 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 431 8.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000605 83fb04da3da037f9ce1af8af4f840195 495 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 489 8.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000605 83fb04da3da037f9ce1af8af4f840195 495 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 470 8.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000605 83fb04da3da037f9ce1af8af4f840195 495 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 445 8.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000605 83fb04da3da037f9ce1af8af4f840195 495 Pfam PF00512 His Kinase A (phospho-acceptor) domain 266 333 7.5E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_000605 83fb04da3da037f9ce1af8af4f840195 495 SMART SM00387 379 492 4.0E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_000605 83fb04da3da037f9ce1af8af4f840195 495 SUPERFAMILY SSF47384 249 334 9.22E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_000605 83fb04da3da037f9ce1af8af4f840195 495 Gene3D G3DSA:1.10.287.130 198 328 3.9E-17 T 14-10-2018 D172_000605 83fb04da3da037f9ce1af8af4f840195 495 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 380 491 1.7E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_007095 3db047cb4d0a353a7655f3094b836a22 235 Gene3D G3DSA:1.20.120.530 79 221 9.1E-30 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_007095 3db047cb4d0a353a7655f3094b836a22 235 Gene3D G3DSA:1.10.10.10 11 77 2.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_007095 3db047cb4d0a353a7655f3094b836a22 235 SMART SM00895 86 213 1.1E-22 T 14-10-2018 IPR011711 GntR, C-terminal D172_007095 3db047cb4d0a353a7655f3094b836a22 235 Pfam PF07729 FCD domain 86 212 1.3E-23 T 14-10-2018 IPR011711 GntR, C-terminal D172_007095 3db047cb4d0a353a7655f3094b836a22 235 SUPERFAMILY SSF48008 82 218 1.75E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_007095 3db047cb4d0a353a7655f3094b836a22 235 SMART SM00345 18 76 8.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_007095 3db047cb4d0a353a7655f3094b836a22 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 3.7E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_007095 3db047cb4d0a353a7655f3094b836a22 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 3.7E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_007095 3db047cb4d0a353a7655f3094b836a22 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 2.1E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_007095 3db047cb4d0a353a7655f3094b836a22 235 SUPERFAMILY SSF46785 13 80 2.2E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 SUPERFAMILY SSF49303 217 328 1.9E-23 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 442 456 - T 14-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 330 623 1.6E-112 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 SUPERFAMILY SSF49785 11 214 1.22E-64 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 Gene3D G3DSA:3.20.20.80 329 619 1.9E-124 T 14-10-2018 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 Pfam PF16353 Domain of unknown function(DUF4981) 637 722 1.7E-13 T 14-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 Gene3D G3DSA:2.60.40.10 216 328 2.0E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 380 405 - T 14-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 Hamap MF_01687 Beta-galactosidase [lacZ]. 2 1028 16.918 T 14-10-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 Pfam PF02929 Beta galactosidase small chain 755 1025 2.2E-66 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 49 214 1.3E-57 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 Gene3D G3DSA:2.60.120.260 7 215 4.1E-79 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 Gene3D G3DSA:2.60.40.10 620 728 3.2E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 SUPERFAMILY SSF74650 739 1025 1.73E-91 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 SMART SM01038 752 1026 1.3E-100 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 Pfam PF00703 Glycosyl hydrolases family 2 218 328 7.9E-17 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 Gene3D G3DSA:2.70.98.10 735 1028 2.0E-89 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 PRINTS PR00132 Glycosyl hydrolase family 2 signature 442 457 5.8E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 PRINTS PR00132 Glycosyl hydrolase family 2 signature 526 541 5.8E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 PRINTS PR00132 Glycosyl hydrolase family 2 signature 339 353 5.8E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 PRINTS PR00132 Glycosyl hydrolase family 2 signature 370 388 5.8E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 PRINTS PR00132 Glycosyl hydrolase family 2 signature 142 157 5.8E-38 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 SUPERFAMILY SSF49303 632 722 4.82E-21 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily D172_014590 68e54fa85fd3a5359af0aee4325fff62 1028 SUPERFAMILY SSF51445 329 617 2.23E-100 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_007975 468ed1c411c0711682a3b5170fd85c15 396 Pfam PF07995 Glucose / Sorbosone dehydrogenase 64 391 1.6E-100 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase D172_007975 468ed1c411c0711682a3b5170fd85c15 396 Gene3D G3DSA:2.120.10.30 49 396 1.4E-88 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_007975 468ed1c411c0711682a3b5170fd85c15 396 SUPERFAMILY SSF50952 55 391 2.48E-37 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 D172_008145 1106ef28c81388a4be1264a622efe20f 117 Gene3D G3DSA:3.40.1260.10 2 117 3.8E-31 T 14-10-2018 IPR027396 DsrEFH-like D172_008145 1106ef28c81388a4be1264a622efe20f 117 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 116 1.9E-32 T 14-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 D172_008145 1106ef28c81388a4be1264a622efe20f 117 Pfam PF02635 DsrE/DsrF-like family 9 116 1.4E-16 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein D172_008145 1106ef28c81388a4be1264a622efe20f 117 SUPERFAMILY SSF75169 4 116 3.7E-21 T 14-10-2018 IPR027396 DsrEFH-like D172_007560 a9b806a87f112de877ebe3928093a801 536 Gene3D G3DSA:2.60.120.200 321 533 1.6E-46 T 14-10-2018 D172_007560 a9b806a87f112de877ebe3928093a801 536 SUPERFAMILY SSF49899 320 532 3.8E-46 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D172_007560 a9b806a87f112de877ebe3928093a801 536 Gene3D G3DSA:2.115.10.20 3 309 3.3E-98 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily D172_007560 a9b806a87f112de877ebe3928093a801 536 Pfam PF04616 Glycosyl hydrolases family 43 5 294 2.1E-96 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 D172_007560 a9b806a87f112de877ebe3928093a801 536 SUPERFAMILY SSF75005 5 299 6.42E-94 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily D172_004470 4453fffa9c1bf5fe608c3a673b06c67e 212 PIRSF PIRSF000190 1 212 5.4E-79 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D172_004470 4453fffa9c1bf5fe608c3a673b06c67e 212 SUPERFAMILY SSF50475 12 212 5.61E-67 T 14-10-2018 D172_004470 4453fffa9c1bf5fe608c3a673b06c67e 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 212 37.665 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D172_004470 4453fffa9c1bf5fe608c3a673b06c67e 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 212 3.4E-20 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D172_004470 4453fffa9c1bf5fe608c3a673b06c67e 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D172_004470 4453fffa9c1bf5fe608c3a673b06c67e 212 Gene3D G3DSA:2.30.110.10 13 212 1.2E-78 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 D172_004470 4453fffa9c1bf5fe608c3a673b06c67e 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 34 115 4.4E-21 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D172_004470 4453fffa9c1bf5fe608c3a673b06c67e 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 212 3.0E-83 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 D172_008525 e5f1058459b0e165529dcca73f383aa2 338 Gene3D G3DSA:2.40.50.940 215 328 3.1E-5 T 14-10-2018 D172_008525 e5f1058459b0e165529dcca73f383aa2 338 Pfam PF08402 TOBE domain 263 331 2.2E-4 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 D172_008525 e5f1058459b0e165529dcca73f383aa2 338 SUPERFAMILY SSF52540 1 233 6.03E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_008525 e5f1058459b0e165529dcca73f383aa2 338 Gene3D G3DSA:3.40.50.300 1 214 8.9E-54 T 14-10-2018 D172_008525 e5f1058459b0e165529dcca73f383aa2 338 SUPERFAMILY SSF50331 232 329 6.46E-9 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal D172_008525 e5f1058459b0e165529dcca73f383aa2 338 SMART SM00382 26 203 2.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_008525 e5f1058459b0e165529dcca73f383aa2 338 Pfam PF00005 ABC transporter 18 154 1.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_008525 e5f1058459b0e165529dcca73f383aa2 338 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_008525 e5f1058459b0e165529dcca73f383aa2 338 Gene3D G3DSA:2.40.50.140 270 325 3.1E-5 T 14-10-2018 D172_010380 16bd8af143a91d72794ed7f7c7bca6c8 495 Gene3D G3DSA:3.50.50.60 4 494 2.2E-187 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_010380 16bd8af143a91d72794ed7f7c7bca6c8 495 PIRSF PIRSF011396 2 495 1.7E-200 T 14-10-2018 IPR033856 Flavin-dependent tryptophan halogenase D172_010380 16bd8af143a91d72794ed7f7c7bca6c8 495 SUPERFAMILY SSF51905 8 423 1.35E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_010380 16bd8af143a91d72794ed7f7c7bca6c8 495 Pfam PF04820 Tryptophan halogenase 9 460 7.4E-185 T 14-10-2018 IPR006905 Flavin-dependent halogenase D172_015830 1be1867847161552e59a1fe36c22fbb0 432 SUPERFAMILY SSF52540 11 195 1.39E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_015830 1be1867847161552e59a1fe36c22fbb0 432 Pfam PF05036 Sporulation related domain 349 410 6.8E-5 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 D172_015830 1be1867847161552e59a1fe36c22fbb0 432 Gene3D G3DSA:3.30.70.1070 325 428 8.9E-25 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D172_015830 1be1867847161552e59a1fe36c22fbb0 432 Gene3D G3DSA:3.40.50.300 13 155 2.1E-6 T 14-10-2018 D172_015830 1be1867847161552e59a1fe36c22fbb0 432 Pfam PF13401 AAA domain 23 128 8.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_017005 5d2755af7511aab9e6ec3d980b6dc652 278 Gene3D G3DSA:3.30.420.10 106 240 3.7E-13 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_017005 5d2755af7511aab9e6ec3d980b6dc652 278 SUPERFAMILY SSF53098 101 263 3.41E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_017005 5d2755af7511aab9e6ec3d980b6dc652 278 Pfam PF00665 Integrase core domain 109 223 1.6E-31 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_004355 5d2755af7511aab9e6ec3d980b6dc652 278 Gene3D G3DSA:3.30.420.10 106 240 3.7E-13 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_004355 5d2755af7511aab9e6ec3d980b6dc652 278 SUPERFAMILY SSF53098 101 263 3.41E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_004355 5d2755af7511aab9e6ec3d980b6dc652 278 Pfam PF00665 Integrase core domain 109 223 1.6E-31 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_003245 5d2755af7511aab9e6ec3d980b6dc652 278 Gene3D G3DSA:3.30.420.10 106 240 3.7E-13 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_003245 5d2755af7511aab9e6ec3d980b6dc652 278 SUPERFAMILY SSF53098 101 263 3.41E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_003245 5d2755af7511aab9e6ec3d980b6dc652 278 Pfam PF00665 Integrase core domain 109 223 1.6E-31 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_018120 5d2755af7511aab9e6ec3d980b6dc652 278 Gene3D G3DSA:3.30.420.10 106 240 3.7E-13 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_018120 5d2755af7511aab9e6ec3d980b6dc652 278 SUPERFAMILY SSF53098 101 263 3.41E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_018120 5d2755af7511aab9e6ec3d980b6dc652 278 Pfam PF00665 Integrase core domain 109 223 1.6E-31 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_017360 5d2755af7511aab9e6ec3d980b6dc652 278 Gene3D G3DSA:3.30.420.10 106 240 3.7E-13 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_017360 5d2755af7511aab9e6ec3d980b6dc652 278 SUPERFAMILY SSF53098 101 263 3.41E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_017360 5d2755af7511aab9e6ec3d980b6dc652 278 Pfam PF00665 Integrase core domain 109 223 1.6E-31 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_012500 5d2755af7511aab9e6ec3d980b6dc652 278 Gene3D G3DSA:3.30.420.10 106 240 3.7E-13 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_012500 5d2755af7511aab9e6ec3d980b6dc652 278 SUPERFAMILY SSF53098 101 263 3.41E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_012500 5d2755af7511aab9e6ec3d980b6dc652 278 Pfam PF00665 Integrase core domain 109 223 1.6E-31 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_001635 b4511013fb276eef8ae63b93d223042f 156 Gene3D G3DSA:1.10.455.10 2 155 3.6E-62 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily D172_001635 b4511013fb276eef8ae63b93d223042f 156 PIRSF PIRSF002122 3 156 3.5E-61 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 D172_001635 b4511013fb276eef8ae63b93d223042f 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.326 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 D172_001635 b4511013fb276eef8ae63b93d223042f 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 6.4E-69 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 D172_001635 b4511013fb276eef8ae63b93d223042f 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.6E-65 T 14-10-2018 IPR023798 Ribosomal protein S7 domain D172_001635 b4511013fb276eef8ae63b93d223042f 156 SUPERFAMILY SSF47973 6 149 9.16E-59 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily D172_001635 b4511013fb276eef8ae63b93d223042f 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_003260 99dea5e670084e284c66839b67d0722c 273 Pfam PF13276 HTH-like domain 27 83 1.4E-13 T 14-10-2018 IPR025948 HTH-like domain D172_003260 99dea5e670084e284c66839b67d0722c 273 Gene3D G3DSA:3.30.420.10 104 262 2.0E-14 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_003260 99dea5e670084e284c66839b67d0722c 273 Pfam PF00665 Integrase core domain 106 220 1.8E-29 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_003260 99dea5e670084e284c66839b67d0722c 273 SUPERFAMILY SSF53098 99 262 2.28E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_003320 99dea5e670084e284c66839b67d0722c 273 Pfam PF13276 HTH-like domain 27 83 1.4E-13 T 14-10-2018 IPR025948 HTH-like domain D172_003320 99dea5e670084e284c66839b67d0722c 273 Gene3D G3DSA:3.30.420.10 104 262 2.0E-14 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_003320 99dea5e670084e284c66839b67d0722c 273 Pfam PF00665 Integrase core domain 106 220 1.8E-29 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_003320 99dea5e670084e284c66839b67d0722c 273 SUPERFAMILY SSF53098 99 262 2.28E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_016355 32522155f698d3a35e4ae0c27cd60cdd 958 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 39 957 1.2E-171 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_016355 32522155f698d3a35e4ae0c27cd60cdd 958 Gene3D G3DSA:2.170.130.10 51 165 7.5E-14 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_016355 32522155f698d3a35e4ae0c27cd60cdd 958 Pfam PF00593 TonB dependent receptor 454 957 5.3E-31 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_016355 32522155f698d3a35e4ae0c27cd60cdd 958 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 161 2.1E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_016355 32522155f698d3a35e4ae0c27cd60cdd 958 SUPERFAMILY SSF56935 42 957 8.79E-80 T 14-10-2018 D172_003195 0d0f6f8367a1c3d58c93568d60a2bc09 155 Gene3D G3DSA:3.40.1550.10 1 154 9.5E-49 T 14-10-2018 IPR028976 CheC-like superfamily D172_003195 0d0f6f8367a1c3d58c93568d60a2bc09 155 Pfam PF13690 Chemotaxis phosphatase CheX 42 140 4.7E-25 T 14-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain D172_003195 0d0f6f8367a1c3d58c93568d60a2bc09 155 SUPERFAMILY SSF103039 1 152 3.66E-40 T 14-10-2018 IPR028976 CheC-like superfamily D172_002700 30fb0e28cd18d28152c789acce83f17f 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 1.0E-73 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 D172_002700 30fb0e28cd18d28152c789acce83f17f 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 7.9E-32 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 D172_002700 30fb0e28cd18d28152c789acce83f17f 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 101 2.8E-23 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal D172_002700 30fb0e28cd18d28152c789acce83f17f 273 SUPERFAMILY SSF48179 163 272 4.25E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_002700 30fb0e28cd18d28152c789acce83f17f 273 PIRSF PIRSF000193 3 272 1.1E-72 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 D172_002700 30fb0e28cd18d28152c789acce83f17f 273 SUPERFAMILY SSF51735 4 161 8.65E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_002700 30fb0e28cd18d28152c789acce83f17f 273 Gene3D G3DSA:3.40.50.720 2 165 2.1E-50 T 14-10-2018 D172_002700 30fb0e28cd18d28152c789acce83f17f 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 24.854 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 D172_002700 30fb0e28cd18d28152c789acce83f17f 273 Gene3D G3DSA:1.10.3730.10 166 273 5.1E-36 T 14-10-2018 D172_019970 7d8ca66f0c90ca3905b5c5ef6cc14295 931 SMART SM00710 683 705 120.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_019970 7d8ca66f0c90ca3905b5c5ef6cc14295 931 SMART SM00710 345 374 4800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_019970 7d8ca66f0c90ca3905b5c5ef6cc14295 931 SMART SM00710 321 344 1100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_019970 7d8ca66f0c90ca3905b5c5ef6cc14295 931 SMART SM00710 234 256 81.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_019970 7d8ca66f0c90ca3905b5c5ef6cc14295 931 SMART SM00710 794 818 7400.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_019970 7d8ca66f0c90ca3905b5c5ef6cc14295 931 SMART SM00710 651 681 4100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_019970 7d8ca66f0c90ca3905b5c5ef6cc14295 931 SMART SM00710 765 793 940.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_019970 7d8ca66f0c90ca3905b5c5ef6cc14295 931 SUPERFAMILY SSF51126 557 881 6.91E-6 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor D172_019970 7d8ca66f0c90ca3905b5c5ef6cc14295 931 SUPERFAMILY SSF51126 107 398 2.94E-6 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor D172_011620 704267b25385333657a9f98e2f588923 1014 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 179 3.0E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_011620 704267b25385333657a9f98e2f588923 1014 SUPERFAMILY SSF56935 53 1012 3.05E-70 T 14-10-2018 D172_011620 704267b25385333657a9f98e2f588923 1014 Pfam PF00593 TonB dependent receptor 456 1011 1.9E-21 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_011620 704267b25385333657a9f98e2f588923 1014 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 58 1013 3.1E-141 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_011620 704267b25385333657a9f98e2f588923 1014 Gene3D G3DSA:2.170.130.10 58 182 1.2E-13 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_018435 dba460d2d6dfbe1ed0e5a5513125c8ea 317 Pfam PF11185 Protein of unknown function (DUF2971) 88 189 5.1E-8 T 14-10-2018 IPR021352 Protein of unknown function DUF2971 D172_020605 bf2ff850bf04074c076969993714bac3 688 SUPERFAMILY SSF56935 26 688 1.1E-98 T 14-10-2018 D172_020605 bf2ff850bf04074c076969993714bac3 688 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 671 688 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site D172_020605 bf2ff850bf04074c076969993714bac3 688 Gene3D G3DSA:2.40.170.20 175 688 8.1E-77 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_020605 bf2ff850bf04074c076969993714bac3 688 Pfam PF00593 TonB dependent receptor 255 687 2.1E-38 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_020605 bf2ff850bf04074c076969993714bac3 688 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 160 2.1E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_020605 bf2ff850bf04074c076969993714bac3 688 Gene3D G3DSA:2.170.130.10 24 171 1.0E-18 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_008695 c8f58d12de39b88e05d7901f7c9d4263 402 SUPERFAMILY SSF56935 22 402 6.11E-53 T 14-10-2018 D172_008695 c8f58d12de39b88e05d7901f7c9d4263 402 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 7.1E-5 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 D172_008695 c8f58d12de39b88e05d7901f7c9d4263 402 PRINTS PR00183 E.coli/Salmonella-type porin signature 104 126 7.1E-5 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 D172_008695 c8f58d12de39b88e05d7901f7c9d4263 402 PRINTS PR00183 E.coli/Salmonella-type porin signature 298 317 7.1E-5 T 14-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 D172_008695 c8f58d12de39b88e05d7901f7c9d4263 402 Gene3D G3DSA:2.40.160.10 22 402 2.5E-52 T 14-10-2018 IPR023614 Porin domain superfamily D172_002020 69cc1b725c2c0fcd4a98cf8d1b834aea 594 Pfam PF00990 Diguanylate cyclase, GGDEF domain 404 494 1.9E-14 T 14-10-2018 IPR000160 GGDEF domain D172_002020 69cc1b725c2c0fcd4a98cf8d1b834aea 594 Gene3D G3DSA:3.30.70.270 392 571 3.2E-27 T 14-10-2018 D172_002020 69cc1b725c2c0fcd4a98cf8d1b834aea 594 Pfam PF00571 CBS domain 335 391 5.2E-4 T 14-10-2018 IPR000644 CBS domain D172_002020 69cc1b725c2c0fcd4a98cf8d1b834aea 594 SUPERFAMILY SSF54631 277 406 3.41E-13 T 14-10-2018 D172_002020 69cc1b725c2c0fcd4a98cf8d1b834aea 594 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 405 496 6.1E-14 T 14-10-2018 IPR000160 GGDEF domain D172_002020 69cc1b725c2c0fcd4a98cf8d1b834aea 594 SMART SM00267 388 554 5.8E-8 T 14-10-2018 IPR000160 GGDEF domain D172_002020 69cc1b725c2c0fcd4a98cf8d1b834aea 594 SUPERFAMILY SSF141868 7 238 1.7E-59 T 14-10-2018 IPR035919 EAL domain superfamily D172_002020 69cc1b725c2c0fcd4a98cf8d1b834aea 594 Gene3D G3DSA:3.20.20.450 4 230 8.0E-62 T 14-10-2018 IPR035919 EAL domain superfamily D172_002020 69cc1b725c2c0fcd4a98cf8d1b834aea 594 Gene3D G3DSA:3.10.580.10 274 391 3.0E-13 T 14-10-2018 D172_002020 69cc1b725c2c0fcd4a98cf8d1b834aea 594 SUPERFAMILY SSF55073 405 572 2.2E-22 T 14-10-2018 IPR029787 Nucleotide cyclase D172_002020 69cc1b725c2c0fcd4a98cf8d1b834aea 594 Pfam PF00563 EAL domain 12 237 8.9E-46 T 14-10-2018 IPR001633 EAL domain D172_002020 69cc1b725c2c0fcd4a98cf8d1b834aea 594 SMART SM00052 2 242 7.9E-25 T 14-10-2018 IPR001633 EAL domain D172_012400 1531a9cd995647fadb861ef1a306e724 89 Gene3D G3DSA:1.10.287.10 2 89 8.7E-33 T 14-10-2018 D172_012400 1531a9cd995647fadb861ef1a306e724 89 SMART SM01387 8 88 3.3E-47 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_012400 1531a9cd995647fadb861ef1a306e724 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.7E-34 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_012400 1531a9cd995647fadb861ef1a306e724 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_012400 1531a9cd995647fadb861ef1a306e724 89 SUPERFAMILY SSF47060 3 89 5.89E-32 T 14-10-2018 IPR009068 S15/NS1, RNA-binding D172_012400 1531a9cd995647fadb861ef1a306e724 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 1.0E-36 T 14-10-2018 D172_012400 1531a9cd995647fadb861ef1a306e724 89 Pfam PF00312 Ribosomal protein S15 8 88 8.9E-34 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_012400 1531a9cd995647fadb861ef1a306e724 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.592 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001750 35cf454d71238c1043766d91ea7ef9d4 437 SMART SM00788 4 431 2.4E-290 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D172_001750 35cf454d71238c1043766d91ea7ef9d4 437 Gene3D G3DSA:3.90.170.10 267 437 3.9E-65 T 14-10-2018 D172_001750 35cf454d71238c1043766d91ea7ef9d4 437 Gene3D G3DSA:3.40.440.10 6 249 1.8E-104 T 14-10-2018 D172_001750 35cf454d71238c1043766d91ea7ef9d4 437 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 437 214.782 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D172_001750 35cf454d71238c1043766d91ea7ef9d4 437 SUPERFAMILY SSF52540 3 436 1.38E-176 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_001750 35cf454d71238c1043766d91ea7ef9d4 437 Gene3D G3DSA:1.10.300.10 102 201 1.8E-104 T 14-10-2018 D172_001750 35cf454d71238c1043766d91ea7ef9d4 437 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D172_001750 35cf454d71238c1043766d91ea7ef9d4 437 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D172_001750 35cf454d71238c1043766d91ea7ef9d4 437 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 436 4.4E-189 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D172_001750 35cf454d71238c1043766d91ea7ef9d4 437 Pfam PF00709 Adenylosuccinate synthetase 5 429 1.7E-174 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 D172_000075 c3e90c41170233901e499ed06fa4280b 431 Gene3D G3DSA:1.10.940.10 1 140 2.6E-39 T 14-10-2018 IPR035926 NusB-like superfamily D172_000075 c3e90c41170233901e499ed06fa4280b 431 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 D172_000075 c3e90c41170233901e499ed06fa4280b 431 SUPERFAMILY SSF53335 141 430 1.99E-71 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_000075 c3e90c41170233901e499ed06fa4280b 431 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 430 4.8E-132 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 D172_000075 c3e90c41170233901e499ed06fa4280b 431 Pfam PF01029 NusB family 6 127 1.7E-21 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 D172_000075 c3e90c41170233901e499ed06fa4280b 431 Gene3D G3DSA:3.30.70.1170 174 231 4.1E-15 T 14-10-2018 D172_000075 c3e90c41170233901e499ed06fa4280b 431 Pfam PF01189 16S rRNA methyltransferase RsmB/F 242 427 3.6E-65 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 D172_000075 c3e90c41170233901e499ed06fa4280b 431 Gene3D G3DSA:3.40.50.150 232 430 1.9E-65 T 14-10-2018 D172_000075 c3e90c41170233901e499ed06fa4280b 431 SUPERFAMILY SSF48013 6 150 4.19E-33 T 14-10-2018 IPR035926 NusB-like superfamily D172_000075 c3e90c41170233901e499ed06fa4280b 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 223 237 4.0E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase D172_000075 c3e90c41170233901e499ed06fa4280b 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 412 429 4.0E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase D172_000075 c3e90c41170233901e499ed06fa4280b 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 4.0E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase D172_000075 c3e90c41170233901e499ed06fa4280b 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 252 262 4.0E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase D172_000075 c3e90c41170233901e499ed06fa4280b 431 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 4.0E-26 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase D172_014485 e891b6f53e71596fea090b438428a4f5 207 Gene3D G3DSA:3.30.420.10 16 198 2.3E-31 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_014485 e891b6f53e71596fea090b438428a4f5 207 Pfam PF00929 Exonuclease 26 188 2.1E-14 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D172_014485 e891b6f53e71596fea090b438428a4f5 207 SUPERFAMILY SSF53098 17 194 4.34E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_014485 e891b6f53e71596fea090b438428a4f5 207 SMART SM00479 24 197 6.0E-15 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D172_012195 1ef96aa9783699fa8e6679dd1e87239c 217 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 D172_012195 1ef96aa9783699fa8e6679dd1e87239c 217 Gene3D G3DSA:3.30.930.10 1 204 2.5E-60 T 14-10-2018 D172_012195 1ef96aa9783699fa8e6679dd1e87239c 217 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 203 6.4E-66 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D172_012195 1ef96aa9783699fa8e6679dd1e87239c 217 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 36.697 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D172_012195 1ef96aa9783699fa8e6679dd1e87239c 217 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 159 8.5E-8 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 D172_012195 1ef96aa9783699fa8e6679dd1e87239c 217 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 2.0E-24 T 14-10-2018 D172_012195 1ef96aa9783699fa8e6679dd1e87239c 217 PIRSF PIRSF016262 1 217 2.5E-61 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D172_012195 1ef96aa9783699fa8e6679dd1e87239c 217 SUPERFAMILY SSF55681 4 205 6.13E-67 T 14-10-2018 D172_009830 2fec26b9d9b56f5230a5c62378d62843 498 Pfam PF07690 Major Facilitator Superfamily 21 457 8.4E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_009830 2fec26b9d9b56f5230a5c62378d62843 498 SUPERFAMILY SSF103473 15 495 7.32E-44 T 14-10-2018 IPR036259 MFS transporter superfamily D172_020590 d1bebb3bc22ed7833b0fe720f17dd427 350 Gene3D G3DSA:1.10.3470.10 11 348 1.9E-105 T 14-10-2018 IPR037294 ABC transporter, BtuC-like D172_020590 d1bebb3bc22ed7833b0fe720f17dd427 350 Pfam PF01032 FecCD transport family 26 344 4.7E-92 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 D172_020590 d1bebb3bc22ed7833b0fe720f17dd427 350 SUPERFAMILY SSF81345 10 344 3.01E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like D172_017705 bf433449731ae6b860e352b8091889aa 512 SMART SM00052 261 502 1.1E-49 T 14-10-2018 IPR001633 EAL domain D172_017705 bf433449731ae6b860e352b8091889aa 512 SUPERFAMILY SSF141868 267 509 8.63E-61 T 14-10-2018 IPR035919 EAL domain superfamily D172_017705 bf433449731ae6b860e352b8091889aa 512 Pfam PF12792 CSS motif domain associated with EAL 36 232 1.1E-27 T 14-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain D172_017705 bf433449731ae6b860e352b8091889aa 512 Pfam PF00563 EAL domain 268 497 4.4E-50 T 14-10-2018 IPR001633 EAL domain D172_017705 bf433449731ae6b860e352b8091889aa 512 Gene3D G3DSA:3.20.20.450 264 511 3.5E-61 T 14-10-2018 IPR035919 EAL domain superfamily D172_000870 05a3056ab59ea98fdd22d68b884b8c6d 108 Gene3D G3DSA:3.40.30.10 1 108 2.4E-37 T 14-10-2018 D172_000870 05a3056ab59ea98fdd22d68b884b8c6d 108 SUPERFAMILY SSF52833 3 107 1.62E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_000870 05a3056ab59ea98fdd22d68b884b8c6d 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 D172_000870 05a3056ab59ea98fdd22d68b884b8c6d 108 Pfam PF00085 Thioredoxin 5 106 2.0E-34 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 D172_000870 05a3056ab59ea98fdd22d68b884b8c6d 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 14-10-2018 D172_000870 05a3056ab59ea98fdd22d68b884b8c6d 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 14-10-2018 D172_000870 05a3056ab59ea98fdd22d68b884b8c6d 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 14-10-2018 D172_000870 05a3056ab59ea98fdd22d68b884b8c6d 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.0E-39 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 D172_000870 05a3056ab59ea98fdd22d68b884b8c6d 108 PIRSF PIRSF000077 2 108 1.6E-44 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 D172_008730 e0c1b057fbb56a6bafb2b4d26156bd19 590 Gene3D G3DSA:1.10.246.130 282 399 9.8E-40 T 14-10-2018 D172_008730 e0c1b057fbb56a6bafb2b4d26156bd19 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 400 418 2.9E-68 T 14-10-2018 D172_008730 e0c1b057fbb56a6bafb2b4d26156bd19 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 145 163 2.9E-68 T 14-10-2018 D172_008730 e0c1b057fbb56a6bafb2b4d26156bd19 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 163 182 2.9E-68 T 14-10-2018 D172_008730 e0c1b057fbb56a6bafb2b4d26156bd19 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 295 314 2.9E-68 T 14-10-2018 D172_008730 e0c1b057fbb56a6bafb2b4d26156bd19 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 483 500 2.9E-68 T 14-10-2018 D172_008730 e0c1b057fbb56a6bafb2b4d26156bd19 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 422 440 2.9E-68 T 14-10-2018 D172_008730 e0c1b057fbb56a6bafb2b4d26156bd19 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 458 473 2.9E-68 T 14-10-2018 D172_008730 e0c1b057fbb56a6bafb2b4d26156bd19 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 70 95 2.9E-68 T 14-10-2018 D172_008730 e0c1b057fbb56a6bafb2b4d26156bd19 590 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 265 281 2.9E-68 T 14-10-2018 D172_008730 e0c1b057fbb56a6bafb2b4d26156bd19 590 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 49 572 5.9E-135 T 14-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 D172_008730 e0c1b057fbb56a6bafb2b4d26156bd19 590 Pfam PF01019 Gamma-glutamyltranspeptidase 63 575 4.8E-159 T 14-10-2018 D172_008730 e0c1b057fbb56a6bafb2b4d26156bd19 590 Gene3D G3DSA:3.60.20.40 400 579 6.8E-59 T 14-10-2018 D172_008730 e0c1b057fbb56a6bafb2b4d26156bd19 590 SUPERFAMILY SSF56235 38 578 6.95E-172 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_003995 141843ec82677997894f077f091e42b6 422 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 13 422 9.3E-118 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) D172_003995 141843ec82677997894f077f091e42b6 422 SUPERFAMILY SSF56935 22 422 3.36E-92 T 14-10-2018 D172_003995 141843ec82677997894f077f091e42b6 422 Gene3D G3DSA:2.40.160.60 22 422 5.1E-129 T 14-10-2018 D172_007275 59c4590659e4b15077a0038bf4e19448 207 SUPERFAMILY SSF52833 1 88 3.1E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_007275 59c4590659e4b15077a0038bf4e19448 207 Pfam PF00043 Glutathione S-transferase, C-terminal domain 136 190 3.6E-9 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal D172_007275 59c4590659e4b15077a0038bf4e19448 207 Gene3D G3DSA:3.40.30.10 1 81 9.3E-20 T 14-10-2018 D172_007275 59c4590659e4b15077a0038bf4e19448 207 Gene3D G3DSA:1.20.1050.10 87 196 2.8E-22 T 14-10-2018 D172_007275 59c4590659e4b15077a0038bf4e19448 207 SUPERFAMILY SSF47616 74 198 1.01E-25 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D172_007275 59c4590659e4b15077a0038bf4e19448 207 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 77 2.7E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D172_007590 60ce00d752c9c40a4a6130b14d97552c 451 Pfam PF01551 Peptidase family M23 344 441 6.5E-30 T 14-10-2018 IPR016047 Peptidase M23 D172_007590 60ce00d752c9c40a4a6130b14d97552c 451 Pfam PF05569 BlaR1 peptidase M56 39 258 1.8E-27 T 14-10-2018 IPR008756 Peptidase M56 D172_007590 60ce00d752c9c40a4a6130b14d97552c 451 Gene3D G3DSA:2.70.70.10 307 449 3.4E-40 T 14-10-2018 IPR011055 Duplicated hybrid motif D172_007590 60ce00d752c9c40a4a6130b14d97552c 451 SUPERFAMILY SSF51261 312 445 2.2E-42 T 14-10-2018 IPR011055 Duplicated hybrid motif D172_018205 00f64bbcbb8ca9b3d077803bb3bcc458 444 Pfam PF13416 Bacterial extracellular solute-binding protein 90 379 3.4E-17 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein D172_018205 00f64bbcbb8ca9b3d077803bb3bcc458 444 PIRSF PIRSF029172 15 443 6.0E-131 T 14-10-2018 IPR027020 Protein ynjB D172_018205 00f64bbcbb8ca9b3d077803bb3bcc458 444 Gene3D G3DSA:3.40.190.10 346 375 2.0E-6 T 14-10-2018 D172_018205 00f64bbcbb8ca9b3d077803bb3bcc458 444 SUPERFAMILY SSF53850 69 440 7.76E-34 T 14-10-2018 D172_018205 00f64bbcbb8ca9b3d077803bb3bcc458 444 Gene3D G3DSA:3.40.190.10 67 193 9.6E-7 T 14-10-2018 D172_018205 00f64bbcbb8ca9b3d077803bb3bcc458 444 Gene3D G3DSA:3.40.190.10 288 345 2.0E-6 T 14-10-2018 D172_009785 264ed3c86261036042868b2073f79386 330 SUPERFAMILY SSF53067 12 327 5.27E-61 T 14-10-2018 D172_009785 264ed3c86261036042868b2073f79386 330 Gene3D G3DSA:3.30.420.40 12 323 2.7E-116 T 14-10-2018 D172_009785 264ed3c86261036042868b2073f79386 330 TIGRFAM TIGR00749 glk: glucokinase 13 323 8.3E-80 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 D172_009785 264ed3c86261036042868b2073f79386 330 Pfam PF02685 Glucokinase 13 328 1.5E-104 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 D172_009785 264ed3c86261036042868b2073f79386 330 Gene3D G3DSA:3.40.367.20 113 312 2.7E-116 T 14-10-2018 D172_009785 264ed3c86261036042868b2073f79386 330 Hamap MF_00524 Glucokinase [glk]. 11 329 32.23 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 D172_001760 ac8c91f7e2213daf22498bb8d7506f5d 615 Pfam PF00999 Sodium/hydrogen exchanger family 10 386 7.7E-36 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 D172_001760 ac8c91f7e2213daf22498bb8d7506f5d 615 Gene3D G3DSA:1.20.1530.20 3 391 8.4E-15 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily D172_001760 ac8c91f7e2213daf22498bb8d7506f5d 615 Pfam PF02254 TrkA-N domain 399 502 4.6E-6 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 D172_001760 ac8c91f7e2213daf22498bb8d7506f5d 615 SUPERFAMILY SSF51735 398 502 2.87E-7 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_001760 ac8c91f7e2213daf22498bb8d7506f5d 615 Gene3D G3DSA:3.40.50.720 395 511 2.2E-10 T 14-10-2018 D172_015035 a24393bcd23e05151f3d127d75bb49ce 63 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 61 17.074 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 D172_015035 a24393bcd23e05151f3d127d75bb49ce 63 Pfam PF02599 Global regulator protein family 1 52 1.4E-26 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 D172_015035 a24393bcd23e05151f3d127d75bb49ce 63 Gene3D G3DSA:3.30.70.1680 1 59 3.0E-30 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 D172_015035 a24393bcd23e05151f3d127d75bb49ce 63 SUPERFAMILY SSF117130 1 54 4.32E-21 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 D172_015035 a24393bcd23e05151f3d127d75bb49ce 63 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 D172_015035 a24393bcd23e05151f3d127d75bb49ce 63 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 5.5E-30 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 D172_017605 3fe80799cc3026d786e3f02c286365f6 625 Pfam PF05954 Phage late control gene D protein (GPD) 30 329 5.1E-74 T 14-10-2018 D172_017605 3fe80799cc3026d786e3f02c286365f6 625 SUPERFAMILY SSF69279 12 193 4.53E-48 T 14-10-2018 D172_017605 3fe80799cc3026d786e3f02c286365f6 625 SUPERFAMILY SSF69255 370 457 2.62E-33 T 14-10-2018 D172_017605 3fe80799cc3026d786e3f02c286365f6 625 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 24 512 5.2E-115 T 14-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein D172_017605 3fe80799cc3026d786e3f02c286365f6 625 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 11 529 1.7E-178 T 14-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset D172_017605 3fe80799cc3026d786e3f02c286365f6 625 Gene3D G3DSA:2.30.110.50 15 332 3.2E-79 T 14-10-2018 D172_017605 3fe80799cc3026d786e3f02c286365f6 625 SUPERFAMILY SSF69349 448 614 7.85E-37 T 14-10-2018 D172_017605 3fe80799cc3026d786e3f02c286365f6 625 SUPERFAMILY SSF69279 211 369 8.33E-19 T 14-10-2018 D172_017605 3fe80799cc3026d786e3f02c286365f6 625 Gene3D G3DSA:2.40.50.230 361 462 9.8E-43 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily D172_017605 3fe80799cc3026d786e3f02c286365f6 625 Gene3D G3DSA:3.30.1920.30 228 290 3.2E-79 T 14-10-2018 D172_017605 3fe80799cc3026d786e3f02c286365f6 625 Gene3D G3DSA:3.55.50.10 107 197 3.2E-79 T 14-10-2018 D172_001050 e07d5d9540bb25d52e6d800c20203275 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 23.107 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 D172_001050 e07d5d9540bb25d52e6d800c20203275 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001050 e07d5d9540bb25d52e6d800c20203275 100 Gene3D G3DSA:3.30.70.330 1 100 8.7E-38 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily D172_001050 e07d5d9540bb25d52e6d800c20203275 100 Pfam PF00276 Ribosomal protein L23 9 95 2.6E-32 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 D172_001050 e07d5d9540bb25d52e6d800c20203275 100 SUPERFAMILY SSF54189 3 92 5.4E-32 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_019420 ba77aba3007d6d8330b9ada7169e4e99 555 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 255 269 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 D172_019420 ba77aba3007d6d8330b9ada7169e4e99 555 SUPERFAMILY SSF54373 291 473 1.18E-61 T 14-10-2018 D172_019420 ba77aba3007d6d8330b9ada7169e4e99 555 Pfam PF00732 GMC oxidoreductase 5 296 4.7E-94 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 D172_019420 ba77aba3007d6d8330b9ada7169e4e99 555 PIRSF PIRSF000137 1 539 2.1E-149 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 D172_019420 ba77aba3007d6d8330b9ada7169e4e99 555 Gene3D G3DSA:3.30.410.40 151 470 1.3E-179 T 14-10-2018 D172_019420 ba77aba3007d6d8330b9ada7169e4e99 555 Pfam PF05199 GMC oxidoreductase 387 523 7.4E-40 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 D172_019420 ba77aba3007d6d8330b9ada7169e4e99 555 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 533 1.8E-239 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 D172_019420 ba77aba3007d6d8330b9ada7169e4e99 555 Gene3D G3DSA:1.10.1220.110 97 150 1.3E-179 T 14-10-2018 D172_019420 ba77aba3007d6d8330b9ada7169e4e99 555 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 D172_019420 ba77aba3007d6d8330b9ada7169e4e99 555 Gene3D G3DSA:4.10.450.10 38 197 1.3E-179 T 14-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 D172_019420 ba77aba3007d6d8330b9ada7169e4e99 555 Gene3D G3DSA:3.50.50.60 5 527 1.3E-179 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_019420 ba77aba3007d6d8330b9ada7169e4e99 555 SUPERFAMILY SSF51905 1 531 8.14E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 Pfam PF13431 Tetratricopeptide repeat 97 128 4.4E-5 T 14-10-2018 D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 SMART SM00028 41 74 16.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 SMART SM00028 75 108 0.0026 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 SMART SM00028 145 178 0.83 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 SMART SM00028 109 142 87.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 SUPERFAMILY SSF54106 545 589 1.44E-7 T 14-10-2018 D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 8 244 1.6E-61 T 14-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 Gene3D G3DSA:3.10.350.10 493 543 9.1E-8 T 14-10-2018 IPR036779 LysM domain superfamily D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 SMART SM00257 546 590 4.2E-5 T 14-10-2018 IPR018392 LysM domain D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 SMART SM00257 497 541 1.5E-7 T 14-10-2018 IPR018392 LysM domain D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 SUPERFAMILY SSF48452 45 207 4.43E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 SUPERFAMILY SSF54106 497 540 3.14E-7 T 14-10-2018 D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 Pfam PF13181 Tetratricopeptide repeat 145 172 0.019 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 Pfam PF01476 LysM domain 498 538 9.0E-7 T 14-10-2018 IPR018392 LysM domain D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 Pfam PF01476 LysM domain 547 587 9.5E-7 T 14-10-2018 IPR018392 LysM domain D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 Gene3D G3DSA:3.10.350.10 544 594 1.1E-11 T 14-10-2018 IPR036779 LysM domain superfamily D172_021035 9b40a95cc612b4911c6c91439ebde66d 597 Gene3D G3DSA:1.25.40.10 39 255 1.8E-41 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_009070 63e6a24a04d3c09ce4aac4bd1934b2b1 429 SUPERFAMILY SSF52833 219 304 7.6E-10 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_009070 63e6a24a04d3c09ce4aac4bd1934b2b1 429 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 39 205 31.1 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_009070 63e6a24a04d3c09ce4aac4bd1934b2b1 429 Pfam PF01625 Peptide methionine sulfoxide reductase 41 199 8.2E-53 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_009070 63e6a24a04d3c09ce4aac4bd1934b2b1 429 Gene3D G3DSA:3.30.1060.10 18 213 6.4E-65 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_009070 63e6a24a04d3c09ce4aac4bd1934b2b1 429 Gene3D G3DSA:3.40.30.10 227 308 2.5E-10 T 14-10-2018 D172_009070 63e6a24a04d3c09ce4aac4bd1934b2b1 429 SUPERFAMILY SSF51316 313 428 2.35E-34 T 14-10-2018 IPR011057 Mss4-like superfamily D172_009070 63e6a24a04d3c09ce4aac4bd1934b2b1 429 SUPERFAMILY SSF55068 33 208 5.76E-59 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_009070 63e6a24a04d3c09ce4aac4bd1934b2b1 429 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 40 199 5.6E-48 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_009070 63e6a24a04d3c09ce4aac4bd1934b2b1 429 Pfam PF01641 SelR domain 313 425 2.7E-29 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 D172_009070 63e6a24a04d3c09ce4aac4bd1934b2b1 429 Gene3D G3DSA:2.170.150.20 309 429 7.2E-34 T 14-10-2018 D172_005165 deb7bda5793afb51c9a32edd940c8e27 63 Pfam PF11661 Protein of unknown function (DUF2986) 13 54 2.7E-18 T 14-10-2018 IPR021677 Protein of unknown function DUF2986 D172_013390 d569a5caa47b932c27bef858375cbb17 132 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 50 123 4.3E-33 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 D172_013390 d569a5caa47b932c27bef858375cbb17 132 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 52 122 2.2E-24 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) D172_013390 d569a5caa47b932c27bef858375cbb17 132 PRINTS PR00956 Flagellar motor switch protein FliN signature 85 98 3.7E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 D172_013390 d569a5caa47b932c27bef858375cbb17 132 PRINTS PR00956 Flagellar motor switch protein FliN signature 69 85 3.7E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 D172_013390 d569a5caa47b932c27bef858375cbb17 132 PRINTS PR00956 Flagellar motor switch protein FliN signature 98 113 3.7E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 D172_013390 d569a5caa47b932c27bef858375cbb17 132 PRINTS PR00956 Flagellar motor switch protein FliN signature 52 68 3.7E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 D172_013390 d569a5caa47b932c27bef858375cbb17 132 Gene3D G3DSA:2.30.330.10 29 132 3.3E-33 T 14-10-2018 IPR036429 SpoA-like superfamily D172_013390 d569a5caa47b932c27bef858375cbb17 132 SUPERFAMILY SSF101801 49 130 2.62E-24 T 14-10-2018 IPR036429 SpoA-like superfamily D172_005330 660fabe4d3df9893b07628d6513b36e8 387 SUPERFAMILY SSF51261 251 378 3.3E-48 T 14-10-2018 IPR011055 Duplicated hybrid motif D172_005330 660fabe4d3df9893b07628d6513b36e8 387 Pfam PF01551 Peptidase family M23 282 376 3.0E-28 T 14-10-2018 IPR016047 Peptidase M23 D172_005330 660fabe4d3df9893b07628d6513b36e8 387 Gene3D G3DSA:2.70.70.10 242 384 6.4E-42 T 14-10-2018 IPR011055 Duplicated hybrid motif D172_019285 67b597e2e5a42fdbc98bd12b69e37a20 305 SMART SM01130 8 283 9.2E-69 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_019285 67b597e2e5a42fdbc98bd12b69e37a20 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 1.3E-31 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_019285 67b597e2e5a42fdbc98bd12b69e37a20 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 110 126 1.3E-31 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_019285 67b597e2e5a42fdbc98bd12b69e37a20 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 78 96 1.3E-31 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_019285 67b597e2e5a42fdbc98bd12b69e37a20 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 42 63 1.3E-31 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_019285 67b597e2e5a42fdbc98bd12b69e37a20 305 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 12 274 3.1E-64 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_019285 67b597e2e5a42fdbc98bd12b69e37a20 305 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 45 62 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_019285 67b597e2e5a42fdbc98bd12b69e37a20 305 Gene3D G3DSA:3.20.20.70 3 304 9.2E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_019285 67b597e2e5a42fdbc98bd12b69e37a20 305 SUPERFAMILY SSF51569 12 280 3.56E-64 T 14-10-2018 D172_019285 67b597e2e5a42fdbc98bd12b69e37a20 305 PIRSF PIRSF001365 5 293 1.9E-86 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_019285 67b597e2e5a42fdbc98bd12b69e37a20 305 Pfam PF00701 Dihydrodipicolinate synthetase family 10 274 1.2E-75 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_004255 61386dcd5c922aeebe693539f0bf3b78 383 Pfam PF01464 Transglycosylase SLT domain 220 345 8.8E-29 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 D172_004255 61386dcd5c922aeebe693539f0bf3b78 383 Pfam PF11873 Domain of unknown function (DUF3393) 6 216 7.9E-60 T 14-10-2018 IPR024570 Murein transglycosylase-C, N-terminal D172_004255 61386dcd5c922aeebe693539f0bf3b78 383 SUPERFAMILY SSF53955 216 382 2.82E-32 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily D172_004255 61386dcd5c922aeebe693539f0bf3b78 383 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 238 266 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 D172_004255 61386dcd5c922aeebe693539f0bf3b78 383 Gene3D G3DSA:1.10.530.10 203 380 4.8E-47 T 14-10-2018 D172_016890 0a806dee4b1d5627c83f97f99297a7d1 180 Gene3D G3DSA:2.60.120.10 2 157 2.2E-52 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_016890 0a806dee4b1d5627c83f97f99297a7d1 180 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 36.014 T 14-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 D172_016890 0a806dee4b1d5627c83f97f99297a7d1 180 Pfam PF03079 ARD/ARD' family 4 165 1.7E-36 T 14-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 D172_016890 0a806dee4b1d5627c83f97f99297a7d1 180 SUPERFAMILY SSF51182 3 177 8.29E-39 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily D172_011685 283c8d1ba45388cec124d752bd681e55 955 SUPERFAMILY SSF63411 283 476 1.1E-34 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D172_011685 283c8d1ba45388cec124d752bd681e55 955 Gene3D G3DSA:3.30.830.10 281 478 8.4E-37 T 14-10-2018 D172_011685 283c8d1ba45388cec124d752bd681e55 955 Pfam PF05193 Peptidase M16 inactive domain 224 400 3.8E-26 T 14-10-2018 IPR007863 Peptidase M16, C-terminal D172_011685 283c8d1ba45388cec124d752bd681e55 955 Pfam PF05193 Peptidase M16 inactive domain 691 862 3.8E-21 T 14-10-2018 IPR007863 Peptidase M16, C-terminal D172_011685 283c8d1ba45388cec124d752bd681e55 955 SUPERFAMILY SSF63411 746 947 4.3E-38 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D172_011685 283c8d1ba45388cec124d752bd681e55 955 Gene3D G3DSA:3.30.830.10 744 940 1.0E-36 T 14-10-2018 D172_011685 283c8d1ba45388cec124d752bd681e55 955 SUPERFAMILY SSF63411 520 730 1.6E-43 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D172_011685 283c8d1ba45388cec124d752bd681e55 955 SUPERFAMILY SSF63411 55 270 1.63E-55 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D172_011685 283c8d1ba45388cec124d752bd681e55 955 Pfam PF00675 Insulinase (Peptidase family M16) 67 195 7.9E-17 T 14-10-2018 IPR011765 Peptidase M16, N-terminal D172_011685 283c8d1ba45388cec124d752bd681e55 955 Pfam PF00675 Insulinase (Peptidase family M16) 542 659 3.0E-13 T 14-10-2018 IPR011765 Peptidase M16, N-terminal D172_011685 283c8d1ba45388cec124d752bd681e55 955 Gene3D G3DSA:3.30.830.10 529 737 6.4E-43 T 14-10-2018 D172_011685 283c8d1ba45388cec124d752bd681e55 955 Gene3D G3DSA:3.30.830.10 52 276 1.4E-65 T 14-10-2018 D172_000025 643ddba1b0e15bca4ffa13441d1b762f 274 Gene3D G3DSA:3.40.50.720 115 237 7.2E-79 T 14-10-2018 D172_000025 643ddba1b0e15bca4ffa13441d1b762f 274 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 269 7.6E-85 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 D172_000025 643ddba1b0e15bca4ffa13441d1b762f 274 SUPERFAMILY SSF51735 102 269 5.97E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_000025 643ddba1b0e15bca4ffa13441d1b762f 274 Gene3D G3DSA:3.40.50.10860 4 255 7.2E-79 T 14-10-2018 D172_000025 643ddba1b0e15bca4ffa13441d1b762f 274 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 274 30.434 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 D172_000025 643ddba1b0e15bca4ffa13441d1b762f 274 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 4.1E-25 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 D172_000025 643ddba1b0e15bca4ffa13441d1b762f 274 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 192 9.3E-12 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase D172_000025 643ddba1b0e15bca4ffa13441d1b762f 274 SUPERFAMILY SSF53223 1 101 3.17E-31 T 14-10-2018 D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 Gene3D G3DSA:3.40.50.300 314 490 4.1E-61 T 14-10-2018 D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 SMART SM00464 10 202 3.3E-77 T 14-10-2018 IPR003111 Lon, substrate-binding domain D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 Gene3D G3DSA:3.30.230.10 585 772 1.6E-83 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 1.5E-54 T 14-10-2018 D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 1.5E-54 T 14-10-2018 D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 1.5E-54 T 14-10-2018 D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 1.5E-54 T 14-10-2018 D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 1.5E-54 T 14-10-2018 D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 3.1E-96 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 4.9E-43 T 14-10-2018 IPR003111 Lon, substrate-binding domain D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 Hamap MF_01973 Lon protease [lon]. 11 772 71.595 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 Gene3D G3DSA:2.30.130.40 1 118 1.2E-36 T 14-10-2018 D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 SMART SM00382 348 492 8.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 Gene3D G3DSA:1.10.8.60 491 584 3.6E-33 T 14-10-2018 D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 SUPERFAMILY SSF54211 595 770 4.55E-59 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 SUPERFAMILY SSF52540 317 587 3.24E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 SUPERFAMILY SSF88697 10 201 1.07E-50 T 14-10-2018 IPR015947 PUA-like superfamily D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 3.1E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 PIRSF PIRSF001174 1 774 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 D172_012790 a4e3407cca381daf2b8dc0edb060d40e 786 Gene3D G3DSA:1.20.58.1480 120 245 1.4E-46 T 14-10-2018 D172_010335 488fb6f85d09c26670600d42958b6c33 151 Pfam PF13673 Acetyltransferase (GNAT) domain 33 131 2.4E-10 T 14-10-2018 IPR000182 GNAT domain D172_010335 488fb6f85d09c26670600d42958b6c33 151 Gene3D G3DSA:3.40.630.30 5 136 9.7E-38 T 14-10-2018 D172_010335 488fb6f85d09c26670600d42958b6c33 151 SUPERFAMILY SSF55729 19 131 1.08E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_005370 764c98596bc16f90b6ba4680e3cd5ca3 890 Pfam PF07238 PilZ domain 721 817 2.6E-9 T 14-10-2018 IPR009875 PilZ domain GO:0035438 D172_005370 764c98596bc16f90b6ba4680e3cd5ca3 890 Gene3D G3DSA:2.40.10.220 717 826 1.7E-9 T 14-10-2018 D172_005370 764c98596bc16f90b6ba4680e3cd5ca3 890 Gene3D G3DSA:3.90.550.10 289 510 2.1E-80 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_005370 764c98596bc16f90b6ba4680e3cd5ca3 890 PRINTS PR01439 Cellulose synthase subunit A signature 226 246 1.8E-48 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 D172_005370 764c98596bc16f90b6ba4680e3cd5ca3 890 PRINTS PR01439 Cellulose synthase subunit A signature 580 599 1.8E-48 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 D172_005370 764c98596bc16f90b6ba4680e3cd5ca3 890 PRINTS PR01439 Cellulose synthase subunit A signature 254 279 1.8E-48 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 D172_005370 764c98596bc16f90b6ba4680e3cd5ca3 890 PRINTS PR01439 Cellulose synthase subunit A signature 620 639 1.8E-48 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 D172_005370 764c98596bc16f90b6ba4680e3cd5ca3 890 PRINTS PR01439 Cellulose synthase subunit A signature 694 715 1.8E-48 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 D172_005370 764c98596bc16f90b6ba4680e3cd5ca3 890 PRINTS PR01439 Cellulose synthase subunit A signature 551 577 1.8E-48 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 D172_005370 764c98596bc16f90b6ba4680e3cd5ca3 890 PRINTS PR01439 Cellulose synthase subunit A signature 309 328 1.8E-48 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 D172_005370 764c98596bc16f90b6ba4680e3cd5ca3 890 PRINTS PR01439 Cellulose synthase subunit A signature 390 414 1.8E-48 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 D172_005370 764c98596bc16f90b6ba4680e3cd5ca3 890 Pfam PF03552 Cellulose synthase 475 706 1.1E-10 T 14-10-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 D172_005370 764c98596bc16f90b6ba4680e3cd5ca3 890 SUPERFAMILY SSF53448 302 581 4.03E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_005370 764c98596bc16f90b6ba4680e3cd5ca3 890 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 175 853 4.9E-268 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 D172_005370 764c98596bc16f90b6ba4680e3cd5ca3 890 SUPERFAMILY SSF141371 723 808 2.16E-6 T 14-10-2018 D172_005370 764c98596bc16f90b6ba4680e3cd5ca3 890 Pfam PF00535 Glycosyl transferase family 2 303 473 1.7E-35 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D172_008795 9247c73f4086dd0ce80222b05f448307 434 Gene3D G3DSA:3.40.190.10 39 391 1.6E-154 T 14-10-2018 D172_008795 9247c73f4086dd0ce80222b05f448307 434 Pfam PF01547 Bacterial extracellular solute-binding protein 38 324 8.9E-51 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein D172_008795 9247c73f4086dd0ce80222b05f448307 434 SUPERFAMILY SSF53850 22 406 1.04E-78 T 14-10-2018 D172_008795 9247c73f4086dd0ce80222b05f448307 434 Gene3D G3DSA:3.40.190.10 135 420 1.6E-154 T 14-10-2018 D172_019000 6e7a15f28bb0cfe2046f25ef41a30a3a 409 Pfam PF04403 Paraquat-inducible protein A 245 399 3.8E-54 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like D172_019000 6e7a15f28bb0cfe2046f25ef41a30a3a 409 Pfam PF04403 Paraquat-inducible protein A 42 194 1.8E-34 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like D172_019000 6e7a15f28bb0cfe2046f25ef41a30a3a 409 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 4 398 1.9E-101 T 14-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type D172_003650 3d8ab2c67d8faa7f07d8d051e2d6a9bd 238 SMART SM00862 156 232 1.2E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_003650 3d8ab2c67d8faa7f07d8d051e2d6a9bd 238 SUPERFAMILY SSF52172 2 125 1.32E-32 T 14-10-2018 IPR011006 CheY-like superfamily D172_003650 3d8ab2c67d8faa7f07d8d051e2d6a9bd 238 SUPERFAMILY SSF46894 134 233 3.4E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_003650 3d8ab2c67d8faa7f07d8d051e2d6a9bd 238 SMART SM00448 4 115 2.0E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_003650 3d8ab2c67d8faa7f07d8d051e2d6a9bd 238 Gene3D G3DSA:1.10.10.10 127 236 2.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_003650 3d8ab2c67d8faa7f07d8d051e2d6a9bd 238 Pfam PF00072 Response regulator receiver domain 6 114 2.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_003650 3d8ab2c67d8faa7f07d8d051e2d6a9bd 238 Gene3D G3DSA:3.40.50.2300 1 126 1.2E-29 T 14-10-2018 D172_003650 3d8ab2c67d8faa7f07d8d051e2d6a9bd 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 232 8.6E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_000375 5e40de32dcc4c9c40d2146065409f14a 798 Pfam PF12704 MacB-like periplasmic core domain 21 234 6.4E-12 T 14-10-2018 IPR025857 MacB-like periplasmic core domain D172_000375 5e40de32dcc4c9c40d2146065409f14a 798 Pfam PF02687 FtsX-like permease family 305 397 2.9E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 D172_002280 083bf77710800f66e507dc7d3a2e554f 471 SMART SM00304 197 251 1.9E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_002280 083bf77710800f66e507dc7d3a2e554f 471 SUPERFAMILY SSF55874 306 468 1.27E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_002280 083bf77710800f66e507dc7d3a2e554f 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 1.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_002280 083bf77710800f66e507dc7d3a2e554f 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 1.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_002280 083bf77710800f66e507dc7d3a2e554f 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 467 1.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_002280 083bf77710800f66e507dc7d3a2e554f 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 423 1.3E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_002280 083bf77710800f66e507dc7d3a2e554f 471 SMART SM00388 252 316 1.5E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_002280 083bf77710800f66e507dc7d3a2e554f 471 Pfam PF00672 HAMP domain 197 247 7.5E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_002280 083bf77710800f66e507dc7d3a2e554f 471 Gene3D G3DSA:1.10.287.130 201 318 1.4E-30 T 14-10-2018 D172_002280 083bf77710800f66e507dc7d3a2e554f 471 SMART SM00387 361 470 5.0E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_002280 083bf77710800f66e507dc7d3a2e554f 471 SUPERFAMILY SSF47384 235 316 6.28E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_002280 083bf77710800f66e507dc7d3a2e554f 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 252 315 1.8E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_002280 083bf77710800f66e507dc7d3a2e554f 471 Gene3D G3DSA:3.30.565.10 320 469 9.0E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_002280 083bf77710800f66e507dc7d3a2e554f 471 SUPERFAMILY SSF158472 197 250 3.79E-9 T 14-10-2018 D172_002280 083bf77710800f66e507dc7d3a2e554f 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 467 2.6E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_016060 e8a5322fdb1457437e859d4e70ac7c07 131 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 56 128 1.3E-18 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016060 e8a5322fdb1457437e859d4e70ac7c07 131 PRINTS PR00607 Class IE cytochrome C signature 118 129 8.1E-12 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 D172_016060 e8a5322fdb1457437e859d4e70ac7c07 131 PRINTS PR00607 Class IE cytochrome C signature 103 115 8.1E-12 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 D172_016060 e8a5322fdb1457437e859d4e70ac7c07 131 PRINTS PR00607 Class IE cytochrome C signature 66 77 8.1E-12 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 D172_016060 e8a5322fdb1457437e859d4e70ac7c07 131 SUPERFAMILY SSF46626 1 130 1.2E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_016060 e8a5322fdb1457437e859d4e70ac7c07 131 Gene3D G3DSA:1.10.760.10 56 131 7.6E-32 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_019620 5ae222ccd657e8b4efb18f985c6d8725 142 SUPERFAMILY SSF54427 3 128 3.0E-23 T 14-10-2018 IPR032710 NTF2-like domain superfamily D172_019620 5ae222ccd657e8b4efb18f985c6d8725 142 Pfam PF12680 SnoaL-like domain 13 113 1.2E-14 T 14-10-2018 IPR037401 SnoaL-like domain D172_019620 5ae222ccd657e8b4efb18f985c6d8725 142 Gene3D G3DSA:3.10.450.50 7 128 4.2E-20 T 14-10-2018 D172_010875 ae69d96f1210f0dc2a33891510bd0db8 267 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 125 4.0E-30 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_010875 ae69d96f1210f0dc2a33891510bd0db8 267 SUPERFAMILY SSF51735 4 266 6.54E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_010875 ae69d96f1210f0dc2a33891510bd0db8 267 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 8.6E-42 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_010875 ae69d96f1210f0dc2a33891510bd0db8 267 PIRSF PIRSF000161 2 267 7.4E-84 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_010875 ae69d96f1210f0dc2a33891510bd0db8 267 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_010875 ae69d96f1210f0dc2a33891510bd0db8 267 Gene3D G3DSA:3.30.360.10 127 234 4.6E-91 T 14-10-2018 D172_010875 ae69d96f1210f0dc2a33891510bd0db8 267 SUPERFAMILY SSF55347 127 236 1.13E-33 T 14-10-2018 D172_010875 ae69d96f1210f0dc2a33891510bd0db8 267 Gene3D G3DSA:3.40.50.720 7 264 4.6E-91 T 14-10-2018 D172_010875 ae69d96f1210f0dc2a33891510bd0db8 267 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 4 265 31.893 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_010875 ae69d96f1210f0dc2a33891510bd0db8 267 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 265 2.9E-81 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_005725 06633d08fe013dd6e093427ef311165a 128 Pfam PF04237 YjbR 13 111 8.9E-24 T 14-10-2018 IPR007351 Uncharacterised protein YjbR D172_005725 06633d08fe013dd6e093427ef311165a 128 SUPERFAMILY SSF142906 1 124 2.22E-35 T 14-10-2018 IPR038056 YjbR-like superfamily D172_005725 06633d08fe013dd6e093427ef311165a 128 Gene3D G3DSA:3.90.1150.30 2 128 8.6E-38 T 14-10-2018 IPR038056 YjbR-like superfamily D172_015495 1a187bc3594471aab2079cd4fb0f1e2b 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 D172_015495 1a187bc3594471aab2079cd4fb0f1e2b 107 SUPERFAMILY SSF89360 1 95 6.8E-32 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D172_015495 1a187bc3594471aab2079cd4fb0f1e2b 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.1E-21 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 D172_015495 1a187bc3594471aab2079cd4fb0f1e2b 107 Gene3D G3DSA:2.60.300.12 2 107 4.4E-36 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D172_015495 1a187bc3594471aab2079cd4fb0f1e2b 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 3.5E-54 T 14-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 D172_015495 1a187bc3594471aab2079cd4fb0f1e2b 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.8E-36 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 D172_010535 6a1150f9bc7f325c095bfb2bcc4848cc 890 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 53 391 1.4E-19 T 14-10-2018 IPR010090 Phage tail tape measure protein D172_010535 6a1150f9bc7f325c095bfb2bcc4848cc 890 Pfam PF10145 Phage-related minor tail protein 93 286 2.4E-23 T 14-10-2018 IPR010090 Phage tail tape measure protein D172_002935 2b833dfde3f6b4d5342c61716b67c8bc 318 Gene3D G3DSA:3.30.70.100 185 278 4.0E-23 T 14-10-2018 D172_002935 2b833dfde3f6b4d5342c61716b67c8bc 318 SUPERFAMILY SSF50182 117 182 1.96E-14 T 14-10-2018 IPR010920 LSM domain superfamily D172_002935 2b833dfde3f6b4d5342c61716b67c8bc 318 Gene3D G3DSA:2.30.30.60 132 181 4.1E-11 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily D172_002935 2b833dfde3f6b4d5342c61716b67c8bc 318 SUPERFAMILY SSF82861 29 115 1.7E-13 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 D172_002935 2b833dfde3f6b4d5342c61716b67c8bc 318 Pfam PF05552 Conserved TM helix 25 60 1.1E-6 T 14-10-2018 IPR008910 Conserved TM helix D172_002935 2b833dfde3f6b4d5342c61716b67c8bc 318 Pfam PF00924 Mechanosensitive ion channel 72 274 1.2E-45 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 D172_002935 2b833dfde3f6b4d5342c61716b67c8bc 318 SUPERFAMILY SSF82689 185 282 9.55E-27 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 D172_007135 4f7ff5934d5f9d793e92805258a9acf5 405 SUPERFAMILY SSF63882 8 177 3.01E-51 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D172_007135 4f7ff5934d5f9d793e92805258a9acf5 405 Pfam PF03453 MoeA N-terminal region (domain I and II) 12 169 1.6E-39 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D172_007135 4f7ff5934d5f9d793e92805258a9acf5 405 Pfam PF03454 MoeA C-terminal region (domain IV) 334 405 3.0E-19 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D172_007135 4f7ff5934d5f9d793e92805258a9acf5 405 SUPERFAMILY SSF63867 330 405 3.79E-21 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D172_007135 4f7ff5934d5f9d793e92805258a9acf5 405 Gene3D G3DSA:2.170.190.11 54 143 1.4E-136 T 14-10-2018 D172_007135 4f7ff5934d5f9d793e92805258a9acf5 405 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 255 288 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 D172_007135 4f7ff5934d5f9d793e92805258a9acf5 405 SUPERFAMILY SSF53218 179 323 2.88E-43 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily D172_007135 4f7ff5934d5f9d793e92805258a9acf5 405 Gene3D G3DSA:2.40.340.10 330 400 1.4E-136 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D172_007135 4f7ff5934d5f9d793e92805258a9acf5 405 Gene3D G3DSA:3.90.105.10 30 176 1.4E-136 T 14-10-2018 D172_007135 4f7ff5934d5f9d793e92805258a9acf5 405 Pfam PF00994 Probable molybdopterin binding domain 182 318 2.2E-28 T 14-10-2018 IPR001453 MoaB/Mog domain D172_007135 4f7ff5934d5f9d793e92805258a9acf5 405 Gene3D G3DSA:3.40.980.10 177 329 1.4E-136 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily D172_007135 4f7ff5934d5f9d793e92805258a9acf5 405 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 179 315 8.0E-34 T 14-10-2018 IPR001453 MoaB/Mog domain D172_007135 4f7ff5934d5f9d793e92805258a9acf5 405 SMART SM00852 182 319 6.1E-41 T 14-10-2018 IPR001453 MoaB/Mog domain D172_002425 9f98819df5c509ffb8faaa956338e872 163 Pfam PF00186 Dihydrofolate reductase 3 159 1.3E-60 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 D172_002425 9f98819df5c509ffb8faaa956338e872 163 PIRSF PIRSF000194 1 163 2.9E-62 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 D172_002425 9f98819df5c509ffb8faaa956338e872 163 Gene3D G3DSA:3.40.430.10 1 163 8.6E-61 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 D172_002425 9f98819df5c509ffb8faaa956338e872 163 PRINTS PR00070 Dihydrofolate reductase signature 14 24 4.1E-16 T 14-10-2018 D172_002425 9f98819df5c509ffb8faaa956338e872 163 PRINTS PR00070 Dihydrofolate reductase signature 28 36 4.1E-16 T 14-10-2018 D172_002425 9f98819df5c509ffb8faaa956338e872 163 PRINTS PR00070 Dihydrofolate reductase signature 41 52 4.1E-16 T 14-10-2018 D172_002425 9f98819df5c509ffb8faaa956338e872 163 PRINTS PR00070 Dihydrofolate reductase signature 92 106 4.1E-16 T 14-10-2018 D172_002425 9f98819df5c509ffb8faaa956338e872 163 SUPERFAMILY SSF53597 1 161 1.96E-57 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 D172_002425 9f98819df5c509ffb8faaa956338e872 163 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 14-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 D172_019635 f1c84b08366b21bf3ec9a378b086d3a4 245 Pfam PF07103 Protein of unknown function (DUF1365) 6 241 1.0E-59 T 14-10-2018 IPR010775 Protein of unknown function DUF1365 D172_012785 0625dcc4f1d4946dd28706f10bec514d 90 SMART SM00411 1 90 2.2E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_012785 0625dcc4f1d4946dd28706f10bec514d 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 3.6E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_012785 0625dcc4f1d4946dd28706f10bec514d 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 3.6E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_012785 0625dcc4f1d4946dd28706f10bec514d 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 3.6E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_012785 0625dcc4f1d4946dd28706f10bec514d 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 D172_012785 0625dcc4f1d4946dd28706f10bec514d 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.5E-33 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_012785 0625dcc4f1d4946dd28706f10bec514d 90 Gene3D G3DSA:4.10.520.10 1 90 8.3E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D172_012785 0625dcc4f1d4946dd28706f10bec514d 90 SUPERFAMILY SSF47729 1 90 5.0E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D172_013705 2bb3f6a9082552b5f2cff4a1eb47aaef 718 Pfam PF02824 TGS domain 395 454 6.9E-19 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 D172_013705 2bb3f6a9082552b5f2cff4a1eb47aaef 718 SUPERFAMILY SSF81301 186 399 1.05E-61 T 14-10-2018 D172_013705 2bb3f6a9082552b5f2cff4a1eb47aaef 718 SUPERFAMILY SSF55021 641 716 7.5E-15 T 14-10-2018 D172_013705 2bb3f6a9082552b5f2cff4a1eb47aaef 718 Pfam PF13291 ACT domain 639 716 2.2E-17 T 14-10-2018 IPR002912 ACT domain D172_013705 2bb3f6a9082552b5f2cff4a1eb47aaef 718 Gene3D G3DSA:3.10.20.30 389 462 9.7E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily D172_013705 2bb3f6a9082552b5f2cff4a1eb47aaef 718 SUPERFAMILY SSF109604 45 196 6.59E-40 T 14-10-2018 D172_013705 2bb3f6a9082552b5f2cff4a1eb47aaef 718 SUPERFAMILY SSF81271 387 454 1.13E-19 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 D172_013705 2bb3f6a9082552b5f2cff4a1eb47aaef 718 Gene3D G3DSA:1.10.3210.10 21 197 9.6E-37 T 14-10-2018 D172_013705 2bb3f6a9082552b5f2cff4a1eb47aaef 718 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 56 716 4.5E-186 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 D172_013705 2bb3f6a9082552b5f2cff4a1eb47aaef 718 Pfam PF04607 Region found in RelA / SpoT proteins 241 350 2.2E-36 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 D172_013705 2bb3f6a9082552b5f2cff4a1eb47aaef 718 Gene3D G3DSA:3.30.460.10 199 331 1.3E-49 T 14-10-2018 D172_013705 2bb3f6a9082552b5f2cff4a1eb47aaef 718 SMART SM00954 241 351 3.3E-61 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 D172_013705 2bb3f6a9082552b5f2cff4a1eb47aaef 718 Pfam PF13328 HD domain 46 181 1.0E-34 T 14-10-2018 IPR003607 HD/PDEase domain D172_013705 2bb3f6a9082552b5f2cff4a1eb47aaef 718 Gene3D G3DSA:3.30.70.260 639 718 8.0E-19 T 14-10-2018 D172_009125 2389cf81fad7b94e9eda3a6472fa1eab 236 SMART SM00479 46 226 1.6E-20 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D172_009125 2389cf81fad7b94e9eda3a6472fa1eab 236 Pfam PF00929 Exonuclease 48 217 1.0E-18 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D172_009125 2389cf81fad7b94e9eda3a6472fa1eab 236 Gene3D G3DSA:3.30.420.10 40 229 3.5E-38 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_009125 2389cf81fad7b94e9eda3a6472fa1eab 236 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 41 227 2.5E-22 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_009125 2389cf81fad7b94e9eda3a6472fa1eab 236 SUPERFAMILY SSF53098 41 225 2.58E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_004375 de16f910b777883f695cc5f7b6593c9a 606 SUPERFAMILY SSF46894 3 92 1.56E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_004375 de16f910b777883f695cc5f7b6593c9a 606 SUPERFAMILY SSF48452 286 390 4.64E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_004375 de16f910b777883f695cc5f7b6593c9a 606 SMART SM00862 21 91 8.3E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_004375 de16f910b777883f695cc5f7b6593c9a 606 Pfam PF00486 Transcriptional regulatory protein, C terminal 22 90 3.8E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_004375 de16f910b777883f695cc5f7b6593c9a 606 Gene3D G3DSA:1.10.10.10 1 112 1.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_004375 de16f910b777883f695cc5f7b6593c9a 606 Gene3D G3DSA:1.25.40.10 272 519 9.0E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_014455 2128ff578a52bd639f74202869b92f67 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 3.5E-112 T 14-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 D172_014455 2128ff578a52bd639f74202869b92f67 229 SUPERFAMILY SSF46894 129 225 4.25E-32 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_014455 2128ff578a52bd639f74202869b92f67 229 Pfam PF00072 Response regulator receiver domain 5 117 1.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_014455 2128ff578a52bd639f74202869b92f67 229 Gene3D G3DSA:1.10.10.10 129 229 7.9E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_014455 2128ff578a52bd639f74202869b92f67 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 1.2E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_014455 2128ff578a52bd639f74202869b92f67 229 SUPERFAMILY SSF52172 2 125 2.85E-42 T 14-10-2018 IPR011006 CheY-like superfamily D172_014455 2128ff578a52bd639f74202869b92f67 229 Gene3D G3DSA:3.40.50.2300 1 128 8.2E-39 T 14-10-2018 D172_014455 2128ff578a52bd639f74202869b92f67 229 SMART SM00448 3 116 1.9E-43 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_014455 2128ff578a52bd639f74202869b92f67 229 SMART SM00862 150 225 2.0E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_018495 23e7a69e52ef5dbc41e4b1c8d77be316 331 Gene3D G3DSA:3.40.50.720 1 127 4.7E-30 T 14-10-2018 D172_018495 23e7a69e52ef5dbc41e4b1c8d77be316 331 SUPERFAMILY SSF51735 2 149 3.4E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_018495 23e7a69e52ef5dbc41e4b1c8d77be316 331 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 120 1.2E-20 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 D172_018495 23e7a69e52ef5dbc41e4b1c8d77be316 331 SUPERFAMILY SSF55347 129 292 1.01E-22 T 14-10-2018 D172_018495 23e7a69e52ef5dbc41e4b1c8d77be316 331 Gene3D G3DSA:3.30.360.10 132 329 1.1E-57 T 14-10-2018 D172_014290 475d98580b39957ed3c4a07b2c28f0e5 306 SUPERFAMILY SSF103088 175 292 6.28E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily D172_014290 475d98580b39957ed3c4a07b2c28f0e5 306 Gene3D G3DSA:3.30.1330.60 146 294 2.1E-45 T 14-10-2018 IPR036737 OmpA-like domain superfamily D172_014290 475d98580b39957ed3c4a07b2c28f0e5 306 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 7 56 7.0E-18 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain D172_014290 475d98580b39957ed3c4a07b2c28f0e5 306 Pfam PF00691 OmpA family 188 286 8.5E-18 T 14-10-2018 IPR006665 OmpA-like domain D172_004120 2e5a6d0c1201e20be2c926739a6f7d82 171 Pfam PF00293 NUDIX domain 24 142 1.5E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D172_004120 2e5a6d0c1201e20be2c926739a6f7d82 171 ProSitePatterns PS00893 Nudix box signature. 51 72 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D172_004120 2e5a6d0c1201e20be2c926739a6f7d82 171 Gene3D G3DSA:3.90.79.10 11 149 1.1E-25 T 14-10-2018 D172_004120 2e5a6d0c1201e20be2c926739a6f7d82 171 SUPERFAMILY SSF55811 17 142 3.79E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D172_004120 2e5a6d0c1201e20be2c926739a6f7d82 171 PRINTS PR00502 NUDIX hydrolase family signature 46 60 2.6E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D172_004120 2e5a6d0c1201e20be2c926739a6f7d82 171 PRINTS PR00502 NUDIX hydrolase family signature 60 75 2.6E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D172_010245 55184672ea68ace33324890e43f232a3 442 Pfam PF00232 Glycosyl hydrolase family 1 13 441 4.7E-141 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 D172_010245 55184672ea68ace33324890e43f232a3 442 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 425 5.7E-22 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 D172_010245 55184672ea68ace33324890e43f232a3 442 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 379 5.7E-22 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 D172_010245 55184672ea68ace33324890e43f232a3 442 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 5.7E-22 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 D172_010245 55184672ea68ace33324890e43f232a3 442 PRINTS PR00131 Glycosyl hydrolase family 1 signature 348 356 5.7E-22 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 D172_010245 55184672ea68ace33324890e43f232a3 442 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 406 5.7E-22 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 D172_010245 55184672ea68ace33324890e43f232a3 442 SUPERFAMILY SSF51445 15 441 9.67E-146 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_010245 55184672ea68ace33324890e43f232a3 442 TIGRFAM TIGR03356 BGL: beta-galactosidase 14 435 3.1E-175 T 14-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 D172_010245 55184672ea68ace33324890e43f232a3 442 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 17 31 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site D172_010245 55184672ea68ace33324890e43f232a3 442 Gene3D G3DSA:3.20.20.80 8 442 1.8E-153 T 14-10-2018 D172_010245 55184672ea68ace33324890e43f232a3 442 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 348 356 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site D172_019095 9c0e1541920e7d1d6b9b8c46649a2e7e 323 Pfam PF13353 4Fe-4S single cluster domain 20 120 7.0E-9 T 14-10-2018 D172_019095 9c0e1541920e7d1d6b9b8c46649a2e7e 323 Pfam PF06463 Molybdenum Cofactor Synthesis C 182 305 4.1E-34 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D172_019095 9c0e1541920e7d1d6b9b8c46649a2e7e 323 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 323 3.2E-99 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D172_019095 9c0e1541920e7d1d6b9b8c46649a2e7e 323 SUPERFAMILY SSF102114 2 276 7.19E-69 T 14-10-2018 D172_019095 9c0e1541920e7d1d6b9b8c46649a2e7e 323 Pfam PF04055 Radical SAM superfamily 16 176 2.5E-24 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D172_019095 9c0e1541920e7d1d6b9b8c46649a2e7e 323 Gene3D G3DSA:3.20.20.70 1 323 1.8E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_019095 9c0e1541920e7d1d6b9b8c46649a2e7e 323 SMART SM00729 11 217 9.3E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D172_008820 8c8a8d73ebeccb7ed54b1932a79bcd85 656 Pfam PF11992 Domain of unknown function (DUF3488) 15 321 1.3E-62 T 14-10-2018 IPR021878 Protein of unknown function DUF3488 D172_008820 8c8a8d73ebeccb7ed54b1932a79bcd85 656 Gene3D G3DSA:3.10.620.30 306 476 1.0E-22 T 14-10-2018 D172_008820 8c8a8d73ebeccb7ed54b1932a79bcd85 656 Pfam PF01841 Transglutaminase-like superfamily 349 465 1.5E-24 T 14-10-2018 IPR002931 Transglutaminase-like D172_008820 8c8a8d73ebeccb7ed54b1932a79bcd85 656 SUPERFAMILY SSF54001 271 551 2.38E-48 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily D172_008820 8c8a8d73ebeccb7ed54b1932a79bcd85 656 SMART SM00460 396 467 1.1E-16 T 14-10-2018 IPR002931 Transglutaminase-like D172_016970 50a6507eceecd9a60fca63c74814d164 907 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 885 905 0.0035 T 14-10-2018 IPR020008 GlyGly-CTERM domain D172_016970 50a6507eceecd9a60fca63c74814d164 907 SUPERFAMILY SSF49313 789 872 4.28E-10 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 D172_016970 50a6507eceecd9a60fca63c74814d164 907 Pfam PF00932 Lamin Tail Domain 18 126 2.4E-16 T 14-10-2018 IPR001322 Lamin tail domain D172_016970 50a6507eceecd9a60fca63c74814d164 907 SUPERFAMILY SSF74853 17 105 7.06E-8 T 14-10-2018 IPR036415 Lamin tail domain superfamily D172_016970 50a6507eceecd9a60fca63c74814d164 907 SUPERFAMILY SSF56219 458 771 7.92E-35 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D172_016970 50a6507eceecd9a60fca63c74814d164 907 Gene3D G3DSA:3.60.10.10 459 771 3.1E-38 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D172_016970 50a6507eceecd9a60fca63c74814d164 907 Gene3D G3DSA:2.60.40.60 779 877 1.3E-11 T 14-10-2018 D172_016970 50a6507eceecd9a60fca63c74814d164 907 Pfam PF00028 Cadherin domain 790 874 7.9E-7 T 14-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 D172_011460 3aeb937b3991622865f63d3ff85b4182 664 SMART SM00487 9 426 1.6E-26 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_011460 3aeb937b3991622865f63d3ff85b4182 664 Pfam PF04851 Type III restriction enzyme, res subunit 13 99 8.8E-10 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 D172_011460 3aeb937b3991622865f63d3ff85b4182 664 Pfam PF02151 UvrB/uvrC motif 628 661 1.4E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 D172_011460 3aeb937b3991622865f63d3ff85b4182 664 SUPERFAMILY SSF52540 414 600 1.89E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_011460 3aeb937b3991622865f63d3ff85b4182 664 SUPERFAMILY SSF52540 3 415 1.18E-134 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_011460 3aeb937b3991622865f63d3ff85b4182 664 SMART SM00490 460 546 4.6E-20 T 14-10-2018 IPR001650 Helicase, C-terminal D172_011460 3aeb937b3991622865f63d3ff85b4182 664 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.2E-19 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain D172_011460 3aeb937b3991622865f63d3ff85b4182 664 SUPERFAMILY SSF46600 619 662 1.57E-9 T 14-10-2018 IPR036876 UVR domain superfamily D172_011460 3aeb937b3991622865f63d3ff85b4182 664 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 661 42.829 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 D172_011460 3aeb937b3991622865f63d3ff85b4182 664 Gene3D G3DSA:3.40.50.300 271 414 4.0E-51 T 14-10-2018 D172_011460 3aeb937b3991622865f63d3ff85b4182 664 Pfam PF00271 Helicase conserved C-terminal domain 435 544 1.3E-18 T 14-10-2018 IPR001650 Helicase, C-terminal D172_011460 3aeb937b3991622865f63d3ff85b4182 664 Gene3D G3DSA:3.40.50.300 415 596 6.2E-50 T 14-10-2018 D172_011460 3aeb937b3991622865f63d3ff85b4182 664 Gene3D G3DSA:4.10.860.10 609 664 1.8E-11 T 14-10-2018 D172_011460 3aeb937b3991622865f63d3ff85b4182 664 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 659 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 D172_011460 3aeb937b3991622865f63d3ff85b4182 664 Gene3D G3DSA:3.40.50.300 1 244 2.2E-77 T 14-10-2018 D172_016035 cfb03d3be35dcd3872092712fcbcdae5 222 Gene3D G3DSA:3.40.50.300 4 201 2.7E-55 T 14-10-2018 D172_016035 cfb03d3be35dcd3872092712fcbcdae5 222 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 196 3.1E-70 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 D172_016035 cfb03d3be35dcd3872092712fcbcdae5 222 SUPERFAMILY SSF52540 19 200 7.9E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_016035 cfb03d3be35dcd3872092712fcbcdae5 222 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 16 200 27.492 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 D172_016035 cfb03d3be35dcd3872092712fcbcdae5 222 Pfam PF01926 50S ribosome-binding GTPase 30 149 4.1E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_021080 e4bd22c9dc5be124f86997f12b1b9499 951 Pfam PF07715 TonB-dependent Receptor Plug Domain 143 249 6.4E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_021080 e4bd22c9dc5be124f86997f12b1b9499 951 Gene3D G3DSA:3.55.50.30 37 105 1.1E-10 T 14-10-2018 D172_021080 e4bd22c9dc5be124f86997f12b1b9499 951 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 116 949 1.3E-128 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_021080 e4bd22c9dc5be124f86997f12b1b9499 951 SUPERFAMILY SSF56935 114 949 4.4E-76 T 14-10-2018 D172_021080 e4bd22c9dc5be124f86997f12b1b9499 951 Pfam PF07660 Secretin and TonB N terminus short domain 62 107 7.8E-7 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 D172_021080 e4bd22c9dc5be124f86997f12b1b9499 951 Pfam PF00593 TonB dependent receptor 496 949 1.6E-28 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_021080 e4bd22c9dc5be124f86997f12b1b9499 951 SMART SM00965 57 107 7.0E-6 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 D172_021080 e4bd22c9dc5be124f86997f12b1b9499 951 Gene3D G3DSA:2.40.170.20 357 950 1.9E-36 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_021080 e4bd22c9dc5be124f86997f12b1b9499 951 Gene3D G3DSA:2.170.130.10 108 255 1.6E-17 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_014040 25b67c44a55fa8dd943f9995ee6f717c 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 3.6E-122 T 14-10-2018 IPR017861 Kae1/TsaD family D172_014040 25b67c44a55fa8dd943f9995ee6f717c 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 D172_014040 25b67c44a55fa8dd943f9995ee6f717c 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 61.333 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 D172_014040 25b67c44a55fa8dd943f9995ee6f717c 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 1.2E-134 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 D172_014040 25b67c44a55fa8dd943f9995ee6f717c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.3E-50 T 14-10-2018 IPR017861 Kae1/TsaD family D172_014040 25b67c44a55fa8dd943f9995ee6f717c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.3E-50 T 14-10-2018 IPR017861 Kae1/TsaD family D172_014040 25b67c44a55fa8dd943f9995ee6f717c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.3E-50 T 14-10-2018 IPR017861 Kae1/TsaD family D172_014040 25b67c44a55fa8dd943f9995ee6f717c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.3E-50 T 14-10-2018 IPR017861 Kae1/TsaD family D172_014040 25b67c44a55fa8dd943f9995ee6f717c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.3E-50 T 14-10-2018 IPR017861 Kae1/TsaD family D172_014040 25b67c44a55fa8dd943f9995ee6f717c 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.3E-50 T 14-10-2018 IPR017861 Kae1/TsaD family D172_014040 25b67c44a55fa8dd943f9995ee6f717c 337 Gene3D G3DSA:3.30.420.40 3 315 2.3E-129 T 14-10-2018 D172_014040 25b67c44a55fa8dd943f9995ee6f717c 337 SUPERFAMILY SSF53067 102 309 8.92E-47 T 14-10-2018 D172_014040 25b67c44a55fa8dd943f9995ee6f717c 337 SUPERFAMILY SSF53067 3 123 5.18E-30 T 14-10-2018 D172_014040 25b67c44a55fa8dd943f9995ee6f717c 337 Gene3D G3DSA:3.30.420.40 129 293 2.3E-129 T 14-10-2018 D172_014040 25b67c44a55fa8dd943f9995ee6f717c 337 Pfam PF00814 Glycoprotease family 24 307 1.1E-99 T 14-10-2018 IPR000905 Gcp-like domain D172_000620 e51d8ce9eb5c4a7f37f02382f52b5c50 233 Gene3D G3DSA:2.60.40.2130 16 169 8.3E-13 T 14-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 D172_000620 e51d8ce9eb5c4a7f37f02382f52b5c50 233 Pfam PF06468 Spondin_N 36 154 1.4E-10 T 14-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 D172_011855 9eeee6682cf7ad5ebc0356949c514456 110 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 4 108 24.493 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 D172_011855 9eeee6682cf7ad5ebc0356949c514456 110 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 4 108 1.0E-40 T 14-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 D172_011855 9eeee6682cf7ad5ebc0356949c514456 110 SUPERFAMILY SSF103481 11 107 1.23E-7 T 14-10-2018 D172_015805 cced5f3844ef3d2e86412ac49ff224d9 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 1.4E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 D172_015805 cced5f3844ef3d2e86412ac49ff224d9 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.4E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 D172_015805 cced5f3844ef3d2e86412ac49ff224d9 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 1.4E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 D172_015805 cced5f3844ef3d2e86412ac49ff224d9 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 1.4E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 D172_015805 cced5f3844ef3d2e86412ac49ff224d9 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 41.691 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 D172_015805 cced5f3844ef3d2e86412ac49ff224d9 334 SUPERFAMILY SSF52374 5 330 7.67E-102 T 14-10-2018 D172_015805 cced5f3844ef3d2e86412ac49ff224d9 334 Pfam PF00579 tRNA synthetases class I (W and Y) 4 284 5.9E-85 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_015805 cced5f3844ef3d2e86412ac49ff224d9 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_015805 cced5f3844ef3d2e86412ac49ff224d9 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 3.5E-120 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 D172_015805 cced5f3844ef3d2e86412ac49ff224d9 334 Gene3D G3DSA:1.10.240.10 186 298 1.3E-139 T 14-10-2018 D172_015805 cced5f3844ef3d2e86412ac49ff224d9 334 Gene3D G3DSA:3.40.50.620 6 329 1.3E-139 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_009680 f2cd65e3b4ed59e24ebc6f7cd512ff66 370 Pfam PF11814 Peptidase_C39 like family 162 366 4.9E-89 T 14-10-2018 IPR021770 Protein of unknown function DUF3335 D172_009680 f2cd65e3b4ed59e24ebc6f7cd512ff66 370 Pfam PF13673 Acetyltransferase (GNAT) domain 23 148 1.3E-14 T 14-10-2018 IPR000182 GNAT domain D172_009680 f2cd65e3b4ed59e24ebc6f7cd512ff66 370 SUPERFAMILY SSF55729 5 153 8.75E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_009680 f2cd65e3b4ed59e24ebc6f7cd512ff66 370 Gene3D G3DSA:3.40.630.30 1 156 1.9E-32 T 14-10-2018 D172_001875 545c20b484c845407c211bed440a60cf 340 SMART SM00849 54 269 3.4E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_001875 545c20b484c845407c211bed440a60cf 340 Pfam PF00753 Metallo-beta-lactamase superfamily 53 235 8.0E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_001875 545c20b484c845407c211bed440a60cf 340 SUPERFAMILY SSF56281 47 294 5.18E-30 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 Gene3D G3DSA:2.40.10.120 37 257 1.5E-84 T 14-10-2018 D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 Gene3D G3DSA:2.30.42.10 362 450 2.9E-21 T 14-10-2018 D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 Gene3D G3DSA:2.30.42.10 261 361 3.3E-25 T 14-10-2018 D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 SUPERFAMILY SSF50156 245 354 2.5E-23 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 SUPERFAMILY SSF50156 378 446 6.05E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 SUPERFAMILY SSF50494 37 259 3.44E-63 T 14-10-2018 IPR009003 Peptidase S1, PA clan D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 Pfam PF13180 PDZ domain 264 354 2.7E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 PRINTS PR00834 HtrA/DegQ protease family signature 217 234 2.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 PRINTS PR00834 HtrA/DegQ protease family signature 99 111 2.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 PRINTS PR00834 HtrA/DegQ protease family signature 120 140 2.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 PRINTS PR00834 HtrA/DegQ protease family signature 303 315 2.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 PRINTS PR00834 HtrA/DegQ protease family signature 160 184 2.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 PRINTS PR00834 HtrA/DegQ protease family signature 195 212 2.0E-57 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 448 2.6E-148 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 Pfam PF13365 Trypsin-like peptidase domain 89 224 2.2E-30 T 14-10-2018 D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 SMART SM00228 263 345 3.9E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 SMART SM00228 370 442 1.3E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 D172_003490 12f68a6745adcb8b408d488ebc4b686d 450 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 371 427 3.4E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 D172_013035 956508e56a3274d7a7df92e07421504b 281 Pfam PF00809 Pterin binding enzyme 21 261 3.3E-83 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_013035 956508e56a3274d7a7df92e07421504b 281 SUPERFAMILY SSF51717 11 276 7.98E-100 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_013035 956508e56a3274d7a7df92e07421504b 281 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 20 35 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_013035 956508e56a3274d7a7df92e07421504b 281 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 20 275 2.7E-101 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 D172_013035 956508e56a3274d7a7df92e07421504b 281 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 54 67 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_013035 956508e56a3274d7a7df92e07421504b 281 Gene3D G3DSA:3.20.20.20 6 280 9.9E-106 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_002410 7bdc3732b5c5d6a67b39311411d5ec34 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.8E-38 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002410 7bdc3732b5c5d6a67b39311411d5ec34 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.961 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002410 7bdc3732b5c5d6a67b39311411d5ec34 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 1.1E-43 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002410 7bdc3732b5c5d6a67b39311411d5ec34 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_002410 7bdc3732b5c5d6a67b39311411d5ec34 103 SUPERFAMILY SSF141091 1 102 1.7E-37 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_005420 59a984dc0b78c4a9f633ecf37cf5447d 569 SUPERFAMILY SSF69593 70 264 3.01E-14 T 14-10-2018 D172_005420 59a984dc0b78c4a9f633ecf37cf5447d 569 SMART SM00563 81 198 1.6E-6 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D172_005420 59a984dc0b78c4a9f633ecf37cf5447d 569 Pfam PF13444 Acetyltransferase (GNAT) domain 324 424 9.4E-23 T 14-10-2018 D172_005420 59a984dc0b78c4a9f633ecf37cf5447d 569 Pfam PF01553 Acyltransferase 71 195 5.6E-11 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D172_005420 59a984dc0b78c4a9f633ecf37cf5447d 569 SUPERFAMILY SSF55729 311 465 7.95E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_008130 f08c5c43c8b007752304402547db67f0 109 SUPERFAMILY SSF69721 1 109 3.14E-43 T 14-10-2018 IPR025526 DsrC-like domain superfamily D172_008130 f08c5c43c8b007752304402547db67f0 109 Pfam PF04358 DsrC like protein 3 109 1.1E-45 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE D172_008130 f08c5c43c8b007752304402547db67f0 109 PIRSF PIRSF006223 2 109 2.8E-44 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE D172_008130 f08c5c43c8b007752304402547db67f0 109 Gene3D G3DSA:1.10.10.370 39 109 1.6E-32 T 14-10-2018 D172_008130 f08c5c43c8b007752304402547db67f0 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 109 1.2E-51 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE D172_008130 f08c5c43c8b007752304402547db67f0 109 Gene3D G3DSA:3.30.1420.10 1 37 5.5E-9 T 14-10-2018 D172_006225 c216813ad3b967981ed367b8604d84a7 241 PIRSF PIRSF006325 1 241 9.1E-105 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 D172_006225 c216813ad3b967981ed367b8604d84a7 241 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 11 241 2.9E-99 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 D172_006225 c216813ad3b967981ed367b8604d84a7 241 SUPERFAMILY SSF53335 18 241 1.4E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_006225 c216813ad3b967981ed367b8604d84a7 241 Gene3D G3DSA:3.40.50.150 17 241 7.6E-59 T 14-10-2018 D172_006225 c216813ad3b967981ed367b8604d84a7 241 Pfam PF13847 Methyltransferase domain 54 164 5.0E-14 T 14-10-2018 IPR025714 Methyltransferase domain D172_006225 c216813ad3b967981ed367b8604d84a7 241 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 241 41.189 T 14-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 D172_016290 bbd7b5b9ffbb6a97fc8cf7ff14fa7c85 228 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 28 220 2.8E-29 T 14-10-2018 IPR010239 Conserved hypothetical protein CHP02001 D172_016290 bbd7b5b9ffbb6a97fc8cf7ff14fa7c85 228 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 4 219 2.2E-47 T 14-10-2018 IPR010239 Conserved hypothetical protein CHP02001 D172_007580 8c5328c4714c8d846d5af29460ad10e5 286 Pfam PF00756 Putative esterase 42 277 2.7E-21 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 D172_007580 8c5328c4714c8d846d5af29460ad10e5 286 Gene3D G3DSA:3.40.50.1820 26 286 5.8E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_007580 8c5328c4714c8d846d5af29460ad10e5 286 SUPERFAMILY SSF53474 30 282 1.36E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_014795 3ee6cbb4621a84c9d188e3ecaf2c1914 174 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 48 64 7.5E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps D172_014795 3ee6cbb4621a84c9d188e3ecaf2c1914 174 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 143 161 7.5E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps D172_014795 3ee6cbb4621a84c9d188e3ecaf2c1914 174 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 72 88 7.5E-13 T 14-10-2018 IPR002177 DNA-binding protein Dps D172_014795 3ee6cbb4621a84c9d188e3ecaf2c1914 174 Pfam PF00210 Ferritin-like domain 28 166 9.3E-26 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 D172_014795 3ee6cbb4621a84c9d188e3ecaf2c1914 174 Gene3D G3DSA:1.20.1260.10 7 174 4.7E-52 T 14-10-2018 IPR012347 Ferritin-like D172_014795 3ee6cbb4621a84c9d188e3ecaf2c1914 174 ProSitePatterns PS00818 Dps protein family signature 1. 48 64 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 D172_014795 3ee6cbb4621a84c9d188e3ecaf2c1914 174 SUPERFAMILY SSF47240 12 166 8.55E-42 T 14-10-2018 IPR009078 Ferritin-like superfamily D172_014795 3ee6cbb4621a84c9d188e3ecaf2c1914 174 PIRSF PIRSF005900 5 171 1.4E-50 T 14-10-2018 IPR002177 DNA-binding protein Dps D172_007495 6d8234a95a75abc1491fa0cc83e81741 317 Pfam PF00753 Metallo-beta-lactamase superfamily 78 211 2.5E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_007495 6d8234a95a75abc1491fa0cc83e81741 317 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 121 141 - T 14-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 D172_007495 6d8234a95a75abc1491fa0cc83e81741 317 Gene3D G3DSA:3.60.15.10 55 314 3.3E-59 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_007495 6d8234a95a75abc1491fa0cc83e81741 317 SUPERFAMILY SSF56281 60 251 3.17E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_007495 6d8234a95a75abc1491fa0cc83e81741 317 SMART SM00849 75 264 1.5E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_006125 d2b3d0ae20f1a23a35cd38807ff63382 154 SUPERFAMILY SSF53098 3 142 9.48E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_006125 d2b3d0ae20f1a23a35cd38807ff63382 154 Gene3D G3DSA:3.30.420.10 1 153 2.4E-57 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_006125 d2b3d0ae20f1a23a35cd38807ff63382 154 Pfam PF00075 RNase H 3 141 1.8E-50 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 D172_006125 d2b3d0ae20f1a23a35cd38807ff63382 154 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 33.458 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 D172_019050 8f7ff3d93cb67aff4a5f49325ceb51d1 318 SUPERFAMILY SSF56935 28 318 2.44E-49 T 14-10-2018 D172_019050 8f7ff3d93cb67aff4a5f49325ceb51d1 318 Pfam PF13609 Gram-negative porin 17 301 1.1E-28 T 14-10-2018 D172_019050 8f7ff3d93cb67aff4a5f49325ceb51d1 318 Gene3D G3DSA:2.40.160.10 27 318 1.1E-46 T 14-10-2018 IPR023614 Porin domain superfamily D172_013490 73b1d1d28b46dead4820482a73e8be96 496 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 9.0E-44 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 D172_013490 73b1d1d28b46dead4820482a73e8be96 496 Pfam PF00700 Bacterial flagellin C-terminal helical region 410 494 9.6E-29 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 D172_013490 73b1d1d28b46dead4820482a73e8be96 496 Gene3D G3DSA:1.20.58.1830 5 494 1.1E-151 T 14-10-2018 D172_013490 73b1d1d28b46dead4820482a73e8be96 496 PRINTS PR00207 Flagellin signature 37 54 1.4E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 D172_013490 73b1d1d28b46dead4820482a73e8be96 496 PRINTS PR00207 Flagellin signature 76 95 1.4E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 D172_013490 73b1d1d28b46dead4820482a73e8be96 496 PRINTS PR00207 Flagellin signature 111 134 1.4E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 D172_013490 73b1d1d28b46dead4820482a73e8be96 496 Gene3D G3DSA:2.30.220.10 191 284 1.1E-151 T 14-10-2018 D172_013490 73b1d1d28b46dead4820482a73e8be96 496 Gene3D G3DSA:2.170.280.10 178 402 1.1E-151 T 14-10-2018 D172_013490 73b1d1d28b46dead4820482a73e8be96 496 Gene3D G3DSA:1.20.1330.10 45 454 1.1E-151 T 14-10-2018 D172_013490 73b1d1d28b46dead4820482a73e8be96 496 SUPERFAMILY SSF64518 1 494 2.48E-108 T 14-10-2018 D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 SUPERFAMILY SSF55785 187 289 3.32E-21 T 14-10-2018 IPR035965 PAS domain superfamily D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 Pfam PF00072 Response regulator receiver domain 19 129 1.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 Pfam PF00990 Diguanylate cyclase, GGDEF domain 304 468 2.6E-35 T 14-10-2018 IPR000160 GGDEF domain D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 SMART SM00267 292 472 5.8E-41 T 14-10-2018 IPR000160 GGDEF domain D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 301 471 7.1E-32 T 14-10-2018 IPR000160 GGDEF domain D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 SUPERFAMILY SSF55073 308 474 4.79E-37 T 14-10-2018 IPR029787 Nucleotide cyclase D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 Pfam PF00563 EAL domain 488 721 9.7E-64 T 14-10-2018 IPR001633 EAL domain D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 176 298 8.9E-17 T 14-10-2018 IPR000014 PAS domain D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 SMART SM00086 250 292 9.5E-4 T 14-10-2018 IPR001610 PAC motif D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 Pfam PF13426 PAS domain 189 290 1.3E-15 T 14-10-2018 IPR000014 PAS domain D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 SMART SM00448 17 129 4.7E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 SUPERFAMILY SSF141868 487 731 2.48E-76 T 14-10-2018 IPR035919 EAL domain superfamily D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 Gene3D G3DSA:3.30.450.20 163 301 3.9E-26 T 14-10-2018 D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 Gene3D G3DSA:3.20.20.450 484 732 1.1E-80 T 14-10-2018 IPR035919 EAL domain superfamily D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 SUPERFAMILY SSF52172 16 153 9.96E-37 T 14-10-2018 IPR011006 CheY-like superfamily D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 SMART SM00052 482 726 7.4E-92 T 14-10-2018 IPR001633 EAL domain D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 SMART SM00091 178 244 9.7E-5 T 14-10-2018 IPR000014 PAS domain D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 Gene3D G3DSA:3.40.50.2300 3 146 4.3E-38 T 14-10-2018 D172_001775 a9a6844bbdeba5e9ba5287215fc011ec 732 Gene3D G3DSA:3.30.70.270 302 483 1.6E-45 T 14-10-2018 D172_019755 f45e48086ce0d4186709ce0512b7e270 204 Gene3D G3DSA:1.10.287.1080 113 204 1.1E-28 T 14-10-2018 D172_019755 f45e48086ce0d4186709ce0512b7e270 204 SUPERFAMILY SSF141734 10 118 4.97E-40 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 D172_019755 f45e48086ce0d4186709ce0512b7e270 204 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 6.0E-29 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 D172_019755 f45e48086ce0d4186709ce0512b7e270 204 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 9 204 34.759 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 D172_019755 f45e48086ce0d4186709ce0512b7e270 204 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 4.0E-23 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 D172_019755 f45e48086ce0d4186709ce0512b7e270 204 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 116 199 5.7E-31 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 D172_019755 f45e48086ce0d4186709ce0512b7e270 204 SUPERFAMILY SSF101386 115 203 9.81E-25 T 14-10-2018 D172_019755 f45e48086ce0d4186709ce0512b7e270 204 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 117 202 2.5E-16 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 D172_019755 f45e48086ce0d4186709ce0512b7e270 204 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 113 199 19.128 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 D172_019755 f45e48086ce0d4186709ce0512b7e270 204 Gene3D G3DSA:3.10.20.400 1 97 1.9E-32 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 Gene3D G3DSA:2.60.40.10 237 330 1.0E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 Gene3D G3DSA:2.60.40.10 49 140 1.3E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 Gene3D G3DSA:2.60.40.10 1395 1521 3.5E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 SMART SM00060 1241 1320 4.8E-5 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 SUPERFAMILY SSF46626 1604 1672 2.04E-7 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 SMART SM00089 156 234 1.1E-11 T 14-10-2018 IPR022409 PKD/Chitinase domain D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 SUPERFAMILY SSF49299 152 233 3.14E-13 T 14-10-2018 IPR035986 PKD domain superfamily D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 SMART SM00635 1336 1416 6.1E-7 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 Pfam PF07995 Glucose / Sorbosone dehydrogenase 475 786 9.5E-41 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 SUPERFAMILY SSF50952 465 808 9.94E-22 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 Gene3D G3DSA:2.60.40.10 1239 1333 4.1E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 SUPERFAMILY SSF49373 1339 1414 4.71E-7 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 SUPERFAMILY SSF49265 1235 1330 1.31E-12 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 Gene3D G3DSA:2.60.40.10 150 231 2.7E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 Pfam PF02368 Bacterial Ig-like domain (group 2) 1346 1415 1.2E-5 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 Gene3D G3DSA:2.120.10.30 447 826 1.6E-71 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 Pfam PF16738 Starch-binding module 26 244 312 2.2E-16 T 14-10-2018 IPR031965 Starch-binding module 26 KEGG: 00500+3.2.1.1 D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 Pfam PF16738 Starch-binding module 26 1424 1502 5.4E-14 T 14-10-2018 IPR031965 Starch-binding module 26 KEGG: 00500+3.2.1.1 D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 Pfam PF16738 Starch-binding module 26 55 122 6.3E-13 T 14-10-2018 IPR031965 Starch-binding module 26 KEGG: 00500+3.2.1.1 D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 Gene3D G3DSA:2.60.40.1080 1155 1238 3.4E-6 T 14-10-2018 D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 Pfam PF07626 Protein of unknown function (DUF1587) 1709 1771 4.3E-7 T 14-10-2018 IPR013036 Domain of unknown function DUF1587 D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 Pfam PF07637 Protein of unknown function (DUF1595) 1789 1837 7.1E-8 T 14-10-2018 IPR013043 Domain of unknown function DUF1595 D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 Pfam PF07631 Protein of unknown function (DUF1592) 1849 1969 3.6E-29 T 14-10-2018 IPR013042 Domain of unknown function DUF1592 D172_017445 d5a775d7ba2a60f827dc72c70518e678 2203 Pfam PF07627 Protein of unknown function (DUF1588) 1999 2095 7.2E-28 T 14-10-2018 IPR013039 Domain of unknown function DUF1588 D172_011905 53524f72b3a63c33054c318cd5121f74 417 Pfam PF05684 Protein of unknown function (DUF819) 17 413 2.2E-99 T 14-10-2018 IPR008537 Protein of unknown function DUF819 D172_011905 53524f72b3a63c33054c318cd5121f74 417 PRINTS PR00173 Glutamate-aspartate symporter signature 359 385 1.4E-5 T 14-10-2018 D172_011905 53524f72b3a63c33054c318cd5121f74 417 PRINTS PR00173 Glutamate-aspartate symporter signature 99 124 1.4E-5 T 14-10-2018 D172_011905 53524f72b3a63c33054c318cd5121f74 417 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 1.4E-5 T 14-10-2018 D172_010995 2f86df6409ebf568f0d2d4cdf54859f1 504 Pfam PF04293 SpoVR like protein 11 441 3.7E-177 T 14-10-2018 IPR007390 Sporulation stage V, protein R D172_016270 e5ea7f06cd4ae81901e4c3cf3a67ec7b 656 Pfam PF05170 AsmA family 1 193 9.5E-24 T 14-10-2018 IPR007844 AsmA D172_016270 e5ea7f06cd4ae81901e4c3cf3a67ec7b 656 Pfam PF05170 AsmA family 249 554 3.9E-20 T 14-10-2018 IPR007844 AsmA D172_015895 5f2c427e7c80355b6ccba4e3fd2799ba 71 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_015895 5f2c427e7c80355b6ccba4e3fd2799ba 71 Gene3D G3DSA:2.30.170.50 1 70 4.4E-34 T 14-10-2018 D172_015895 5f2c427e7c80355b6ccba4e3fd2799ba 71 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.8E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_015895 5f2c427e7c80355b6ccba4e3fd2799ba 71 PRINTS PR01249 Ribosomal protein L31 signature 31 46 3.8E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_015895 5f2c427e7c80355b6ccba4e3fd2799ba 71 PRINTS PR01249 Ribosomal protein L31 signature 46 64 3.8E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_015895 5f2c427e7c80355b6ccba4e3fd2799ba 71 Pfam PF01197 Ribosomal protein L31 1 65 1.8E-32 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_015895 5f2c427e7c80355b6ccba4e3fd2799ba 71 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 3.1E-34 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_015895 5f2c427e7c80355b6ccba4e3fd2799ba 71 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 31.374 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_015895 5f2c427e7c80355b6ccba4e3fd2799ba 71 SUPERFAMILY SSF143800 1 67 3.92E-29 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_005535 ff117d5ea5f1e39af955110d4eb7781d 325 SMART SM00363 18 79 1.9E-4 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_005535 ff117d5ea5f1e39af955110d4eb7781d 325 SUPERFAMILY SSF55174 18 68 1.36E-8 T 14-10-2018 D172_005535 ff117d5ea5f1e39af955110d4eb7781d 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 313 1.8E-102 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_005535 ff117d5ea5f1e39af955110d4eb7781d 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_005535 ff117d5ea5f1e39af955110d4eb7781d 325 Gene3D G3DSA:3.10.290.10 2 73 1.2E-18 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D172_005535 ff117d5ea5f1e39af955110d4eb7781d 325 Gene3D G3DSA:3.30.2350.10 84 316 9.4E-71 T 14-10-2018 D172_005535 ff117d5ea5f1e39af955110d4eb7781d 325 Pfam PF01479 S4 domain 19 63 9.5E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_005535 ff117d5ea5f1e39af955110d4eb7781d 325 SUPERFAMILY SSF55120 76 311 1.73E-76 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_005535 ff117d5ea5f1e39af955110d4eb7781d 325 Pfam PF00849 RNA pseudouridylate synthase 92 242 8.4E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_010860 1ef295b38cb4c120cf303b5081077de4 158 Gene3D G3DSA:3.10.50.30 76 158 1.9E-31 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 D172_010860 1ef295b38cb4c120cf303b5081077de4 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 6.8E-28 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 D172_010860 1ef295b38cb4c120cf303b5081077de4 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 D172_010860 1ef295b38cb4c120cf303b5081077de4 158 SUPERFAMILY SSF46557 3 78 1.22E-27 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 D172_010860 1ef295b38cb4c120cf303b5081077de4 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.953 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 D172_010860 1ef295b38cb4c120cf303b5081077de4 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 D172_010860 1ef295b38cb4c120cf303b5081077de4 158 Gene3D G3DSA:1.10.287.180 1 75 5.6E-31 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 D172_010860 1ef295b38cb4c120cf303b5081077de4 158 PIRSF PIRSF006092 1 158 1.1E-51 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 D172_010860 1ef295b38cb4c120cf303b5081077de4 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 1.2E-57 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 D172_010860 1ef295b38cb4c120cf303b5081077de4 158 SUPERFAMILY SSF54534 82 157 1.31E-23 T 14-10-2018 D172_010860 1ef295b38cb4c120cf303b5081077de4 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 1.1E-29 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 D172_005195 f5ebb720b0eff5167ed629d883738bcf 481 SMART SM00387 367 481 8.5E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_005195 f5ebb720b0eff5167ed629d883738bcf 481 SMART SM00388 257 321 9.8E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_005195 f5ebb720b0eff5167ed629d883738bcf 481 Pfam PF00672 HAMP domain 204 251 1.2E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_005195 f5ebb720b0eff5167ed629d883738bcf 481 SUPERFAMILY SSF47384 242 321 1.41E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_005195 f5ebb720b0eff5167ed629d883738bcf 481 SUPERFAMILY SSF55874 311 480 8.51E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_005195 f5ebb720b0eff5167ed629d883738bcf 481 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 319 2.0E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_005195 f5ebb720b0eff5167ed629d883738bcf 481 Gene3D G3DSA:1.10.287.130 256 320 7.1E-12 T 14-10-2018 D172_005195 f5ebb720b0eff5167ed629d883738bcf 481 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 479 7.9E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_005195 f5ebb720b0eff5167ed629d883738bcf 481 Gene3D G3DSA:1.20.1480.50 169 255 1.2E-11 T 14-10-2018 D172_005195 f5ebb720b0eff5167ed629d883738bcf 481 SMART SM00304 204 256 1.1E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_005195 f5ebb720b0eff5167ed629d883738bcf 481 Gene3D G3DSA:3.30.565.10 321 481 1.3E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_005195 f5ebb720b0eff5167ed629d883738bcf 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 421 7.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_005195 f5ebb720b0eff5167ed629d883738bcf 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 7.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_005195 f5ebb720b0eff5167ed629d883738bcf 481 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 435 7.0E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_005195 f5ebb720b0eff5167ed629d883738bcf 481 SUPERFAMILY SSF158472 204 251 2.22E-8 T 14-10-2018 D172_007730 aaafaba5292c502488057caeb0474326 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D172_007730 aaafaba5292c502488057caeb0474326 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007730 aaafaba5292c502488057caeb0474326 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007730 aaafaba5292c502488057caeb0474326 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.0E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007730 aaafaba5292c502488057caeb0474326 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 8.3E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007730 aaafaba5292c502488057caeb0474326 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 8.3E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007730 aaafaba5292c502488057caeb0474326 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 8.3E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007730 aaafaba5292c502488057caeb0474326 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.3E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007730 aaafaba5292c502488057caeb0474326 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 8.3E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007730 aaafaba5292c502488057caeb0474326 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 8.3E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_007730 aaafaba5292c502488057caeb0474326 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 252 9.0E-70 T 14-10-2018 D172_007730 aaafaba5292c502488057caeb0474326 259 Gene3D G3DSA:3.40.50.720 1 258 7.1E-82 T 14-10-2018 D172_007730 aaafaba5292c502488057caeb0474326 259 SUPERFAMILY SSF51735 8 255 1.64E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_000845 ac9af56366f1d44582fe42cbfb93ff25 695 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 695 5.5E-88 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 D172_000845 ac9af56366f1d44582fe42cbfb93ff25 695 SUPERFAMILY SSF56935 21 695 2.85E-116 T 14-10-2018 D172_000845 ac9af56366f1d44582fe42cbfb93ff25 695 Pfam PF00593 TonB dependent receptor 231 693 7.6E-53 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_000845 ac9af56366f1d44582fe42cbfb93ff25 695 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 150 1.4E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_000845 ac9af56366f1d44582fe42cbfb93ff25 695 Gene3D G3DSA:2.40.170.20 161 695 5.3E-100 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_000845 ac9af56366f1d44582fe42cbfb93ff25 695 Gene3D G3DSA:2.170.130.10 36 160 5.4E-30 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_007505 8be568f81462c0ac140b04fe79f4181c 295 Gene3D G3DSA:1.10.10.10 1 92 2.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_007505 8be568f81462c0ac140b04fe79f4181c 295 SUPERFAMILY SSF53850 92 292 7.76E-17 T 14-10-2018 D172_007505 8be568f81462c0ac140b04fe79f4181c 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.9E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_007505 8be568f81462c0ac140b04fe79f4181c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_007505 8be568f81462c0ac140b04fe79f4181c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_007505 8be568f81462c0ac140b04fe79f4181c 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_007505 8be568f81462c0ac140b04fe79f4181c 295 SUPERFAMILY SSF46785 1 86 2.94E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_007505 8be568f81462c0ac140b04fe79f4181c 295 Pfam PF03466 LysR substrate binding domain 88 291 2.8E-14 T 14-10-2018 IPR005119 LysR, substrate-binding D172_007505 8be568f81462c0ac140b04fe79f4181c 295 Gene3D G3DSA:3.40.190.290 93 275 1.5E-15 T 14-10-2018 D172_007870 c3c67b32e028934a1d36042368e105cd 753 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 344 2.0E-11 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D172_007870 c3c67b32e028934a1d36042368e105cd 753 Gene3D G3DSA:3.40.50.300 441 654 1.1E-78 T 14-10-2018 D172_007870 c3c67b32e028934a1d36042368e105cd 753 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 D172_007870 c3c67b32e028934a1d36042368e105cd 753 SMART SM00382 489 656 1.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_007870 c3c67b32e028934a1d36042368e105cd 753 SMART SM00382 208 353 6.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_007870 c3c67b32e028934a1d36042368e105cd 753 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 735 6.2E-24 T 14-10-2018 IPR019489 Clp ATPase, C-terminal D172_007870 c3c67b32e028934a1d36042368e105cd 753 SUPERFAMILY SSF52540 439 747 4.69E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_007870 c3c67b32e028934a1d36042368e105cd 753 SMART SM01086 655 744 1.6E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal D172_007870 c3c67b32e028934a1d36042368e105cd 753 Gene3D G3DSA:1.10.8.60 353 440 1.8E-33 T 14-10-2018 D172_007870 c3c67b32e028934a1d36042368e105cd 753 Pfam PF07724 AAA domain (Cdc48 subfamily) 488 649 1.2E-48 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D172_007870 c3c67b32e028934a1d36042368e105cd 753 Gene3D G3DSA:1.10.1780.10 1 143 2.4E-45 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D172_007870 c3c67b32e028934a1d36042368e105cd 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 1.5E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 D172_007870 c3c67b32e028934a1d36042368e105cd 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 1.5E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 D172_007870 c3c67b32e028934a1d36042368e105cd 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 1.5E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 D172_007870 c3c67b32e028934a1d36042368e105cd 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 1.5E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 D172_007870 c3c67b32e028934a1d36042368e105cd 753 Gene3D G3DSA:1.10.8.60 655 751 2.9E-31 T 14-10-2018 D172_007870 c3c67b32e028934a1d36042368e105cd 753 SUPERFAMILY SSF81923 1 142 3.92E-59 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 D172_007870 c3c67b32e028934a1d36042368e105cd 753 Gene3D G3DSA:3.40.50.300 158 352 2.5E-63 T 14-10-2018 D172_007870 c3c67b32e028934a1d36042368e105cd 753 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 736 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 D172_007870 c3c67b32e028934a1d36042368e105cd 753 SUPERFAMILY SSF52540 171 429 1.07E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_007870 c3c67b32e028934a1d36042368e105cd 753 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 4.8E-14 T 14-10-2018 IPR004176 Clp, N-terminal D172_007870 c3c67b32e028934a1d36042368e105cd 753 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 520 538 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 D172_004250 d940ede8bf0c89244b1b9f04b4c888f3 166 Gene3D G3DSA:3.10.20.10 3 164 1.3E-57 T 14-10-2018 D172_004250 d940ede8bf0c89244b1b9f04b4c888f3 166 Pfam PF07566 Domain of Unknown Function (DUF1543) 89 138 1.6E-16 T 14-10-2018 IPR011440 Domain of unknown function DUF1543 D172_004250 d940ede8bf0c89244b1b9f04b4c888f3 166 Pfam PF07566 Domain of Unknown Function (DUF1543) 15 65 1.2E-21 T 14-10-2018 IPR011440 Domain of unknown function DUF1543 D172_004250 d940ede8bf0c89244b1b9f04b4c888f3 166 Gene3D G3DSA:3.50.100.10 56 157 1.3E-57 T 14-10-2018 D172_017865 d5eaffda8ff82b27f9ef0cda76473c09 384 Pfam PF02371 Transposase IS116/IS110/IS902 family 227 300 7.8E-20 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D172_017865 d5eaffda8ff82b27f9ef0cda76473c09 384 Pfam PF01548 Transposase 9 157 6.6E-14 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D172_015310 d4dd083f4cf108fe753079d989ab117c 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 260 2.7E-36 T 14-10-2018 D172_015310 d4dd083f4cf108fe753079d989ab117c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 5.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_015310 d4dd083f4cf108fe753079d989ab117c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 5.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_015310 d4dd083f4cf108fe753079d989ab117c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 5.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_015310 d4dd083f4cf108fe753079d989ab117c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 5.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_015310 d4dd083f4cf108fe753079d989ab117c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 5.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_015310 d4dd083f4cf108fe753079d989ab117c 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 5.6E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_015310 d4dd083f4cf108fe753079d989ab117c 262 Gene3D G3DSA:3.40.50.720 1 261 5.7E-55 T 14-10-2018 D172_015310 d4dd083f4cf108fe753079d989ab117c 262 SUPERFAMILY SSF51735 13 261 2.18E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_008430 8e7873f233c3efc427043509a99ceef5 528 Pfam PF00364 Biotin-requiring enzyme 4 75 4.7E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment D172_008430 8e7873f233c3efc427043509a99ceef5 528 Pfam PF00364 Biotin-requiring enzyme 108 179 1.1E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment D172_008430 8e7873f233c3efc427043509a99ceef5 528 SUPERFAMILY SSF51230 1 85 3.93E-25 T 14-10-2018 IPR011053 Single hybrid motif D172_008430 8e7873f233c3efc427043509a99ceef5 528 Pfam PF02817 e3 binding domain 226 260 3.3E-12 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 D172_008430 8e7873f233c3efc427043509a99ceef5 528 SUPERFAMILY SSF51230 107 189 5.1E-23 T 14-10-2018 IPR011053 Single hybrid motif D172_008430 8e7873f233c3efc427043509a99ceef5 528 Gene3D G3DSA:2.40.50.100 1 104 7.9E-23 T 14-10-2018 D172_008430 8e7873f233c3efc427043509a99ceef5 528 SUPERFAMILY SSF52777 292 525 1.07E-77 T 14-10-2018 D172_008430 8e7873f233c3efc427043509a99ceef5 528 Gene3D G3DSA:4.10.320.10 214 266 9.3E-17 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 D172_008430 8e7873f233c3efc427043509a99ceef5 528 Gene3D G3DSA:3.30.559.10 280 525 6.2E-89 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D172_008430 8e7873f233c3efc427043509a99ceef5 528 SUPERFAMILY SSF47005 223 264 1.23E-11 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 D172_008430 8e7873f233c3efc427043509a99ceef5 528 Gene3D G3DSA:2.40.50.100 105 188 1.6E-21 T 14-10-2018 D172_008430 8e7873f233c3efc427043509a99ceef5 528 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 297 525 9.1E-84 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 D172_005555 224a09acee56b6cc8c0c1eec49c75e41 525 Gene3D G3DSA:3.30.590.20 20 525 2.1E-178 T 14-10-2018 D172_005555 224a09acee56b6cc8c0c1eec49c75e41 525 Pfam PF04262 Glutamate-cysteine ligase 10 384 6.8E-161 T 14-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 D172_005555 224a09acee56b6cc8c0c1eec49c75e41 525 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 525 195.192 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 D172_005555 224a09acee56b6cc8c0c1eec49c75e41 525 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 16 520 8.8E-178 T 14-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 D172_005555 224a09acee56b6cc8c0c1eec49c75e41 525 SUPERFAMILY SSF55931 9 518 7.85E-186 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 D172_008025 08c09fc9ec3c7fcbc69ba665cf0e83d9 334 Gene3D G3DSA:2.40.30.170 46 278 7.7E-41 T 14-10-2018 D172_008025 08c09fc9ec3c7fcbc69ba665cf0e83d9 334 Gene3D G3DSA:2.40.50.100 53 227 7.7E-41 T 14-10-2018 D172_008025 08c09fc9ec3c7fcbc69ba665cf0e83d9 334 SUPERFAMILY SSF111369 169 280 6.54E-7 T 14-10-2018 D172_008025 08c09fc9ec3c7fcbc69ba665cf0e83d9 334 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 281 4.5E-15 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D172_008025 08c09fc9ec3c7fcbc69ba665cf0e83d9 334 SUPERFAMILY SSF111369 48 166 1.44E-10 T 14-10-2018 D172_008025 08c09fc9ec3c7fcbc69ba665cf0e83d9 334 Gene3D G3DSA:1.10.287.470 87 192 7.7E-41 T 14-10-2018 D172_010770 cfbfc168d06443153c0410ddf4a9dad8 183 Pfam PF13590 Domain of unknown function (DUF4136) 23 179 4.7E-34 T 14-10-2018 IPR025411 Domain of unknown function DUF4136 D172_010770 cfbfc168d06443153c0410ddf4a9dad8 183 Gene3D G3DSA:3.30.160.670 14 179 4.2E-35 T 14-10-2018 D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 Gene3D G3DSA:3.40.630.30 457 597 2.9E-24 T 14-10-2018 D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 Pfam PF00206 Lyase 6 301 6.4E-88 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 Pfam PF00583 Acetyltransferase (GNAT) family 496 565 3.4E-6 T 14-10-2018 IPR000182 GNAT domain D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 SUPERFAMILY SSF55729 457 576 1.48E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 PIRSF PIRSF036456 1 615 1.8E-280 T 14-10-2018 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase GO:0004056|GO:0005737|GO:0006526|GO:0016746 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 Pfam PF14698 Argininosuccinate lyase C-terminal 365 431 1.0E-22 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 Gene3D G3DSA:1.10.275.10 1 107 1.2E-34 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 3.5E-68 T 14-10-2018 D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 3.5E-68 T 14-10-2018 D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 3.5E-68 T 14-10-2018 D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 3.5E-68 T 14-10-2018 D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 3.5E-68 T 14-10-2018 D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 3.5E-68 T 14-10-2018 D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 SUPERFAMILY SSF48557 3 454 1.32E-138 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.4E-27 T 14-10-2018 IPR000362 Fumarate lyase family D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.4E-27 T 14-10-2018 IPR000362 Fumarate lyase family D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 5.4E-27 T 14-10-2018 IPR000362 Fumarate lyase family D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.4E-27 T 14-10-2018 IPR000362 Fumarate lyase family D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 Gene3D G3DSA:1.20.200.10 108 445 5.7E-141 T 14-10-2018 D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 Gene3D G3DSA:1.10.40.30 363 433 5.7E-141 T 14-10-2018 D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 455 1.2E-190 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D172_013955 6f632eaf1a1072eb12e64f14baf69412 621 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 39.685 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D172_002415 7f19334efb12344c7d4a8f60c48b2087 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 5.5E-38 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002415 7f19334efb12344c7d4a8f60c48b2087 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 5.5E-38 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002415 7f19334efb12344c7d4a8f60c48b2087 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 5.5E-38 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002415 7f19334efb12344c7d4a8f60c48b2087 85 Gene3D G3DSA:2.40.50.100 21 85 9.3E-30 T 14-10-2018 D172_002415 7f19334efb12344c7d4a8f60c48b2087 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.3E-42 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002415 7f19334efb12344c7d4a8f60c48b2087 85 SUPERFAMILY SSF110324 2 83 1.01E-34 T 14-10-2018 D172_002415 7f19334efb12344c7d4a8f60c48b2087 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 1.0E-17 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002415 7f19334efb12344c7d4a8f60c48b2087 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_002415 7f19334efb12344c7d4a8f60c48b2087 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.112 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002415 7f19334efb12344c7d4a8f60c48b2087 85 Pfam PF01016 Ribosomal L27 protein 2 82 3.1E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_017430 03d9d8489a34f5330db0832d02000c01 226 SUPERFAMILY SSF51735 3 213 9.13E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_017430 03d9d8489a34f5330db0832d02000c01 226 Pfam PF00106 short chain dehydrogenase 5 193 1.5E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_017430 03d9d8489a34f5330db0832d02000c01 226 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D172_017430 03d9d8489a34f5330db0832d02000c01 226 Gene3D G3DSA:3.40.50.720 1 224 1.5E-60 T 14-10-2018 D172_017430 03d9d8489a34f5330db0832d02000c01 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 4.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_017430 03d9d8489a34f5330db0832d02000c01 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 211 4.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_017430 03d9d8489a34f5330db0832d02000c01 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 4.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_017430 03d9d8489a34f5330db0832d02000c01 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_017430 03d9d8489a34f5330db0832d02000c01 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_017430 03d9d8489a34f5330db0832d02000c01 226 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 SMART SM00388 473 539 2.2E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 Gene3D G3DSA:3.40.50.2300 711 840 3.5E-32 T 14-10-2018 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 640 650 2.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 681 694 2.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 622 636 2.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 PRINTS PR00344 Bacterial sensor protein C-terminal signature 657 675 2.4E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 SUPERFAMILY SSF55874 528 697 2.75E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 SUPERFAMILY SSF48452 214 403 1.82E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 588 694 2.4E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 Gene3D G3DSA:3.30.565.10 540 699 4.8E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 SMART SM00387 586 697 1.2E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 SUPERFAMILY SSF48452 63 232 7.59E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 SUPERFAMILY SSF47384 459 540 5.1E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 Pfam PF01627 Hpt domain 866 915 2.2E-5 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 SUPERFAMILY SSF52172 720 846 6.97E-35 T 14-10-2018 IPR011006 CheY-like superfamily D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 Gene3D G3DSA:1.10.287.130 438 537 2.5E-26 T 14-10-2018 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 SMART SM00448 719 830 7.9E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 SMART SM00028 180 213 9.4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 SMART SM00028 100 133 0.081 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 SMART SM00028 60 93 35.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 SMART SM00028 220 253 0.39 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 SMART SM00028 300 333 4.3 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 SMART SM00028 140 173 0.03 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 Pfam PF00512 His Kinase A (phospho-acceptor) domain 474 538 3.7E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 Gene3D G3DSA:1.25.40.10 20 333 3.1E-41 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 Pfam PF00072 Response regulator receiver domain 721 828 1.9E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 Gene3D G3DSA:1.20.120.160 841 939 4.7E-8 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 SUPERFAMILY SSF47226 813 928 2.09E-11 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_000860 27a333a863cb6b1d4ce6c2ff34de714f 941 Pfam PF13424 Tetratricopeptide repeat 180 247 2.0E-11 T 14-10-2018 D172_009985 ff3749754333c01c927f19c0a480aeac 276 Pfam PF05114 Protein of unknown function (DUF692) 7 268 3.7E-107 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 D172_009985 ff3749754333c01c927f19c0a480aeac 276 Gene3D G3DSA:3.20.20.150 4 273 8.3E-93 T 14-10-2018 D172_020180 01376fb78dff25d2362ee43d14f88403 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 711 726 9.0E-6 T 14-10-2018 D172_020180 01376fb78dff25d2362ee43d14f88403 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 694 709 9.0E-6 T 14-10-2018 D172_020180 01376fb78dff25d2362ee43d14f88403 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 747 759 9.0E-6 T 14-10-2018 D172_020180 01376fb78dff25d2362ee43d14f88403 791 SUPERFAMILY SSF52009 348 467 6.02E-35 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 D172_020180 01376fb78dff25d2362ee43d14f88403 791 Gene3D G3DSA:3.30.1490.20 1 193 4.5E-72 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D172_020180 01376fb78dff25d2362ee43d14f88403 791 Gene3D G3DSA:3.20.20.60 478 791 1.2E-102 T 14-10-2018 D172_020180 01376fb78dff25d2362ee43d14f88403 791 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 414 425 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 D172_020180 01376fb78dff25d2362ee43d14f88403 791 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 345 2.8E-118 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 D172_020180 01376fb78dff25d2362ee43d14f88403 791 Gene3D G3DSA:3.30.470.20 194 357 1.1E-58 T 14-10-2018 D172_020180 01376fb78dff25d2362ee43d14f88403 791 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 482 784 1.8E-61 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 D172_020180 01376fb78dff25d2362ee43d14f88403 791 Pfam PF00391 PEP-utilising enzyme, mobile domain 385 455 2.4E-26 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 D172_020180 01376fb78dff25d2362ee43d14f88403 791 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 787 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 D172_020180 01376fb78dff25d2362ee43d14f88403 791 SUPERFAMILY SSF56059 2 385 1.53E-109 T 14-10-2018 D172_020180 01376fb78dff25d2362ee43d14f88403 791 Gene3D G3DSA:3.50.30.10 373 477 3.8E-42 T 14-10-2018 D172_020180 01376fb78dff25d2362ee43d14f88403 791 SUPERFAMILY SSF51621 462 787 7.07E-96 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D172_020180 01376fb78dff25d2362ee43d14f88403 791 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 694 712 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 D172_020180 01376fb78dff25d2362ee43d14f88403 791 PIRSF PIRSF000854 1 791 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 D172_002715 1bf0c0700213396d6499359a556c06c1 378 SUPERFAMILY SSF52540 5 337 4.89E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_002715 1bf0c0700213396d6499359a556c06c1 378 Pfam PF00437 Type II/IV secretion system protein 58 269 3.6E-38 T 14-10-2018 IPR001482 Type II/IV secretion system protein D172_002715 1bf0c0700213396d6499359a556c06c1 378 Gene3D G3DSA:3.40.50.300 102 359 3.6E-88 T 14-10-2018 D172_002715 1bf0c0700213396d6499359a556c06c1 378 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 5 345 3.2E-127 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 D172_002715 1bf0c0700213396d6499359a556c06c1 378 SMART SM00382 123 248 2.8E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_002715 1bf0c0700213396d6499359a556c06c1 378 Gene3D G3DSA:3.30.450.90 1 100 4.5E-23 T 14-10-2018 D172_017600 d72e0a44cd8ba20bc3858e608e0ba5be 159 SUPERFAMILY SSF141452 4 157 1.23E-37 T 14-10-2018 IPR036624 Hcp1-like superfamily D172_017600 d72e0a44cd8ba20bc3858e608e0ba5be 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 133 3.6E-29 T 14-10-2018 IPR008514 Type VI secretion system effector, Hcp D172_017600 d72e0a44cd8ba20bc3858e608e0ba5be 159 Gene3D G3DSA:2.30.110.20 2 157 4.2E-35 T 14-10-2018 IPR036624 Hcp1-like superfamily D172_011205 32a8d4edaf482bf204b4ae5dcd365dcc 430 PIRSF PIRSF005353 1 430 1.3E-174 T 14-10-2018 IPR026033 Purine permease PbuG-like D172_011205 32a8d4edaf482bf204b4ae5dcd365dcc 430 Pfam PF00860 Permease family 18 391 7.9E-54 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 D172_016030 edf892907e931c778a28ec748a3a9ba9 210 Gene3D G3DSA:1.10.760.10 115 210 2.4E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_016030 edf892907e931c778a28ec748a3a9ba9 210 SUPERFAMILY SSF46626 24 110 8.87E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_016030 edf892907e931c778a28ec748a3a9ba9 210 PRINTS PR00605 Class IC cytochrome C signature 35 46 7.5E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 D172_016030 edf892907e931c778a28ec748a3a9ba9 210 PRINTS PR00605 Class IC cytochrome C signature 84 106 7.5E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 D172_016030 edf892907e931c778a28ec748a3a9ba9 210 Pfam PF00034 Cytochrome c 30 109 5.3E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016030 edf892907e931c778a28ec748a3a9ba9 210 Pfam PF00034 Cytochrome c 127 207 6.8E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016030 edf892907e931c778a28ec748a3a9ba9 210 PIRSF PIRSF000005 1 210 3.1E-60 T 14-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 D172_016030 edf892907e931c778a28ec748a3a9ba9 210 Gene3D G3DSA:1.10.760.10 24 110 7.1E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_016030 edf892907e931c778a28ec748a3a9ba9 210 SUPERFAMILY SSF46626 119 208 2.17E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_010110 eb0265bea11ab114ab7169a4f69d41d1 278 SUPERFAMILY SSF53850 12 267 1.02E-14 T 14-10-2018 D172_010110 eb0265bea11ab114ab7169a4f69d41d1 278 TIGRFAM TIGR02285 TIGR02285: conserved hypothetical protein 6 266 1.2E-43 T 14-10-2018 IPR011972 Conserved hypothetical protein CHP02285 D172_010110 eb0265bea11ab114ab7169a4f69d41d1 278 Gene3D G3DSA:3.40.190.10 28 264 3.4E-7 T 14-10-2018 D172_010110 eb0265bea11ab114ab7169a4f69d41d1 278 Gene3D G3DSA:3.40.190.10 90 226 3.4E-7 T 14-10-2018 D172_006775 9f3e1bb224aaaa80233f44533d2df22a 347 Gene3D G3DSA:3.20.20.70 1 347 1.6E-124 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_006775 9f3e1bb224aaaa80233f44533d2df22a 347 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 334 1.9E-83 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 D172_006775 9f3e1bb224aaaa80233f44533d2df22a 347 SUPERFAMILY SSF51395 3 335 1.53E-105 T 14-10-2018 D172_019530 80031bfd462cce297a918189dd3414ef 345 Pfam PF00849 RNA pseudouridylate synthase 65 190 1.6E-15 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_019530 80031bfd462cce297a918189dd3414ef 345 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 D172_019530 80031bfd462cce297a918189dd3414ef 345 Gene3D G3DSA:3.10.290.10 2 57 1.0E-18 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D172_019530 80031bfd462cce297a918189dd3414ef 345 SUPERFAMILY SSF55120 63 225 4.03E-36 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_019530 80031bfd462cce297a918189dd3414ef 345 SUPERFAMILY SSF55174 6 58 5.21E-13 T 14-10-2018 D172_019530 80031bfd462cce297a918189dd3414ef 345 Gene3D G3DSA:3.30.70.580 58 131 1.7E-16 T 14-10-2018 D172_019530 80031bfd462cce297a918189dd3414ef 345 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 221 2.7E-45 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 D172_019530 80031bfd462cce297a918189dd3414ef 345 SMART SM00363 5 67 8.9E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_019530 80031bfd462cce297a918189dd3414ef 345 Pfam PF01479 S4 domain 6 35 5.9E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_019530 80031bfd462cce297a918189dd3414ef 345 Gene3D G3DSA:3.30.70.1560 132 203 7.2E-34 T 14-10-2018 D172_004900 dfd6c8c2cff4c07b56a03da8941d335f 397 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 392 51.477 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D172_004900 dfd6c8c2cff4c07b56a03da8941d335f 397 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 2.4E-38 T 14-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D172_004900 dfd6c8c2cff4c07b56a03da8941d335f 397 Pfam PF07055 Enoyl reductase FAD binding domain 323 386 6.7E-23 T 14-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D172_004900 dfd6c8c2cff4c07b56a03da8941d335f 397 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 4.6E-110 T 14-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D172_004900 dfd6c8c2cff4c07b56a03da8941d335f 397 Gene3D G3DSA:3.40.50.720 1 397 7.5E-173 T 14-10-2018 D172_011375 d4dd14fa0317bf7cd5b30d1b714917be 159 PIRSF PIRSF000239 3 146 2.2E-17 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D172_011375 d4dd14fa0317bf7cd5b30d1b714917be 159 SUPERFAMILY SSF52833 6 158 4.42E-43 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_011375 d4dd14fa0317bf7cd5b30d1b714917be 159 Gene3D G3DSA:3.40.30.10 2 158 4.5E-41 T 14-10-2018 D172_011375 d4dd14fa0317bf7cd5b30d1b714917be 159 Pfam PF00578 AhpC/TSA family 10 138 1.7E-32 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D172_006365 ffeb7905212b008494f68450150bc690 607 Pfam PF01541 GIY-YIG catalytic domain 17 92 9.7E-11 T 14-10-2018 IPR000305 GIY-YIG endonuclease D172_006365 ffeb7905212b008494f68450150bc690 607 SUPERFAMILY SSF46600 188 241 2.35E-12 T 14-10-2018 IPR036876 UVR domain superfamily D172_006365 ffeb7905212b008494f68450150bc690 607 Pfam PF14520 Helix-hairpin-helix domain 552 603 3.0E-6 T 14-10-2018 D172_006365 ffeb7905212b008494f68450150bc690 607 SMART SM00278 583 602 0.0032 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D172_006365 ffeb7905212b008494f68450150bc690 607 SMART SM00278 551 570 30.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D172_006365 ffeb7905212b008494f68450150bc690 607 Gene3D G3DSA:1.10.150.20 550 605 9.6E-21 T 14-10-2018 D172_006365 ffeb7905212b008494f68450150bc690 607 Gene3D G3DSA:3.30.420.340 377 537 4.6E-45 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily D172_006365 ffeb7905212b008494f68450150bc690 607 Pfam PF02151 UvrB/uvrC motif 203 236 4.8E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 D172_006365 ffeb7905212b008494f68450150bc690 607 SUPERFAMILY SSF82771 17 99 2.88E-23 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 D172_006365 ffeb7905212b008494f68450150bc690 607 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 384 537 7.6E-44 T 14-10-2018 IPR001162 UvrC family homology region D172_006365 ffeb7905212b008494f68450150bc690 607 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 8 583 4.8E-199 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 D172_006365 ffeb7905212b008494f68450150bc690 607 SMART SM00465 16 97 3.6E-23 T 14-10-2018 IPR000305 GIY-YIG endonuclease D172_006365 ffeb7905212b008494f68450150bc690 607 Gene3D G3DSA:3.40.1440.10 5 101 4.2E-33 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 D172_006365 ffeb7905212b008494f68450150bc690 607 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 602 27.654 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 D172_006365 ffeb7905212b008494f68450150bc690 607 SUPERFAMILY SSF47781 513 605 2.06E-20 T 14-10-2018 IPR010994 RuvA domain 2-like D172_002080 eefa0a3afd3fdac839ac90c20904721b 532 Pfam PF00563 EAL domain 287 516 5.9E-55 T 14-10-2018 IPR001633 EAL domain D172_002080 eefa0a3afd3fdac839ac90c20904721b 532 SMART SM00052 280 522 7.8E-61 T 14-10-2018 IPR001633 EAL domain D172_002080 eefa0a3afd3fdac839ac90c20904721b 532 Gene3D G3DSA:3.20.20.450 280 530 5.0E-62 T 14-10-2018 IPR035919 EAL domain superfamily D172_002080 eefa0a3afd3fdac839ac90c20904721b 532 SUPERFAMILY SSF141868 286 528 2.48E-60 T 14-10-2018 IPR035919 EAL domain superfamily D172_003640 7708c61f783012007193649d983e5672 306 Pfam PF02649 Type I GTP cyclohydrolase folE2 5 294 1.1E-74 T 14-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 D172_003640 7708c61f783012007193649d983e5672 306 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 5 299 33.613 T 14-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 Gene3D G3DSA:1.20.210.10 5 564 5.7E-186 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 SUPERFAMILY SSF81442 46 560 1.57E-175 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 4 649 0.0 T 14-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 282 336 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 58 506 9.1E-134 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 49 74 7.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 168 180 7.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 326 341 7.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 200 218 7.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 463 484 7.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 280 301 7.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 413 432 7.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 229 248 7.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 403 7.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 350 371 7.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 126 150 7.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004955 ad4f41c1328a85d48d08b6a773103221 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 99 122 7.2E-95 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_014865 0850b3726f04ce9103af8ac67c4b8fe7 93 Pfam PF00639 PPIC-type PPIASE domain 13 89 2.1E-21 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 D172_014865 0850b3726f04ce9103af8ac67c4b8fe7 93 Gene3D G3DSA:3.10.50.40 2 92 1.8E-34 T 14-10-2018 D172_014865 0850b3726f04ce9103af8ac67c4b8fe7 93 SUPERFAMILY SSF54534 5 91 2.09E-28 T 14-10-2018 D172_014865 0850b3726f04ce9103af8ac67c4b8fe7 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 D172_019025 e85927825286c91bf4cae49542d49358 134 Pfam PF08570 Protein of unknown function (DUF1761) 10 131 2.2E-27 T 14-10-2018 IPR013879 Protein of unknown function DUF1761 D172_015560 eb47ffca80ce26544c57d9b2c0cedd84 679 Gene3D G3DSA:1.10.1370.40 13 674 1.5E-264 T 14-10-2018 D172_015560 eb47ffca80ce26544c57d9b2c0cedd84 679 Pfam PF01432 Peptidase family M3 221 676 5.6E-160 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 D172_015560 eb47ffca80ce26544c57d9b2c0cedd84 679 SUPERFAMILY SSF55486 1 676 3.35E-209 T 14-10-2018 D172_015560 eb47ffca80ce26544c57d9b2c0cedd84 679 Gene3D G3DSA:1.10.1370.10 139 609 1.5E-264 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 D172_013910 af4b1d3cd93b8a6c84667f8e66671a7e 485 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 385 485 1.7E-36 T 14-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 D172_013910 af4b1d3cd93b8a6c84667f8e66671a7e 485 Gene3D G3DSA:3.40.50.620 179 398 2.3E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_013910 af4b1d3cd93b8a6c84667f8e66671a7e 485 Pfam PF02926 THUMP domain 44 165 2.8E-23 T 14-10-2018 IPR004114 THUMP domain GO:0003723 D172_013910 af4b1d3cd93b8a6c84667f8e66671a7e 485 SMART SM00981 78 168 3.0E-23 T 14-10-2018 IPR004114 THUMP domain GO:0003723 D172_013910 af4b1d3cd93b8a6c84667f8e66671a7e 485 SUPERFAMILY SSF143437 3 176 7.15E-45 T 14-10-2018 D172_013910 af4b1d3cd93b8a6c84667f8e66671a7e 485 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 5 378 2.1E-109 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 D172_013910 af4b1d3cd93b8a6c84667f8e66671a7e 485 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 485 206.257 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 D172_013910 af4b1d3cd93b8a6c84667f8e66671a7e 485 SUPERFAMILY SSF52821 411 484 1.08E-11 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily D172_013910 af4b1d3cd93b8a6c84667f8e66671a7e 485 SUPERFAMILY SSF52402 178 375 1.54E-42 T 14-10-2018 D172_013910 af4b1d3cd93b8a6c84667f8e66671a7e 485 Gene3D G3DSA:3.30.2130.30 1 177 4.2E-34 T 14-10-2018 D172_013910 af4b1d3cd93b8a6c84667f8e66671a7e 485 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 179 372 2.8E-69 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 D172_013910 af4b1d3cd93b8a6c84667f8e66671a7e 485 Gene3D G3DSA:3.40.250.10 399 485 1.5E-10 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily D172_011780 8f71a223bfa95d72b56f91e88b4c4dbb 146 SUPERFAMILY SSF51316 23 144 7.85E-51 T 14-10-2018 IPR011057 Mss4-like superfamily D172_011780 8f71a223bfa95d72b56f91e88b4c4dbb 146 Gene3D G3DSA:2.170.150.20 6 145 2.6E-51 T 14-10-2018 D172_011780 8f71a223bfa95d72b56f91e88b4c4dbb 146 Pfam PF01641 SelR domain 28 144 4.9E-45 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 D172_011780 8f71a223bfa95d72b56f91e88b4c4dbb 146 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 24 144 1.4E-47 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 D172_019390 602c020fda6b4563109ded16f7000f3f 535 SUPERFAMILY SSF51905 100 528 8.43E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_019390 602c020fda6b4563109ded16f7000f3f 535 PIRSF PIRSF038984 1 535 1.6E-241 T 14-10-2018 IPR028348 FAD dependent protein D172_019390 602c020fda6b4563109ded16f7000f3f 535 Gene3D G3DSA:3.30.70.2700 1 80 2.8E-28 T 14-10-2018 D172_019390 602c020fda6b4563109ded16f7000f3f 535 Gene3D G3DSA:3.50.50.60 469 533 2.5E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_019390 602c020fda6b4563109ded16f7000f3f 535 Gene3D G3DSA:3.50.50.60 85 301 6.2E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_019390 602c020fda6b4563109ded16f7000f3f 535 Pfam PF01593 Flavin containing amine oxidoreductase 215 268 8.3E-5 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 D172_002505 63138e3710f92ac31ebde7b6d18bec0b 813 Pfam PF00593 TonB dependent receptor 349 811 8.4E-38 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_002505 63138e3710f92ac31ebde7b6d18bec0b 813 Gene3D G3DSA:2.40.170.20 175 813 5.0E-69 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_002505 63138e3710f92ac31ebde7b6d18bec0b 813 SUPERFAMILY SSF56935 25 813 3.11E-98 T 14-10-2018 D172_002505 63138e3710f92ac31ebde7b6d18bec0b 813 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 161 3.3E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_002505 63138e3710f92ac31ebde7b6d18bec0b 813 Gene3D G3DSA:2.170.130.10 27 173 1.4E-23 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_003925 e741c849fe3dbbb61a03efcf0e748c83 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 2.9E-20 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003925 e741c849fe3dbbb61a03efcf0e748c83 150 Gene3D G3DSA:3.10.430.100 61 149 6.1E-29 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily D172_003925 e741c849fe3dbbb61a03efcf0e748c83 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003925 e741c849fe3dbbb61a03efcf0e748c83 150 Gene3D G3DSA:3.40.5.10 1 50 6.0E-22 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003925 e741c849fe3dbbb61a03efcf0e748c83 150 SUPERFAMILY SSF55658 1 57 3.49E-17 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal D172_003925 e741c849fe3dbbb61a03efcf0e748c83 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.377 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_003925 e741c849fe3dbbb61a03efcf0e748c83 150 SUPERFAMILY SSF55653 60 149 3.92E-25 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily D172_003925 e741c849fe3dbbb61a03efcf0e748c83 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 8.5E-53 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_003925 e741c849fe3dbbb61a03efcf0e748c83 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 3.5E-25 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal D172_014775 e2ad4b34263fe6fc873d4d4b4001dc93 277 Pfam PF00924 Mechanosensitive ion channel 66 262 2.5E-51 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 D172_014775 e2ad4b34263fe6fc873d4d4b4001dc93 277 Gene3D G3DSA:2.30.30.60 123 172 2.8E-19 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily D172_014775 e2ad4b34263fe6fc873d4d4b4001dc93 277 SUPERFAMILY SSF82861 21 106 1.28E-17 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 D172_014775 e2ad4b34263fe6fc873d4d4b4001dc93 277 Gene3D G3DSA:3.30.70.100 174 266 1.9E-23 T 14-10-2018 D172_014775 e2ad4b34263fe6fc873d4d4b4001dc93 277 SUPERFAMILY SSF50182 109 173 6.54E-17 T 14-10-2018 IPR010920 LSM domain superfamily D172_014775 e2ad4b34263fe6fc873d4d4b4001dc93 277 SUPERFAMILY SSF82689 175 273 1.7E-28 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 D172_017180 50e478c3a6591ca08f3bffad8ebc0fda 458 Gene3D G3DSA:1.20.200.10 133 399 1.6E-96 T 14-10-2018 D172_017180 50e478c3a6591ca08f3bffad8ebc0fda 458 ProSitePatterns PS00163 Fumarate lyases signature. 311 320 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 D172_017180 50e478c3a6591ca08f3bffad8ebc0fda 458 Pfam PF00206 Lyase 12 336 6.4E-89 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal D172_017180 50e478c3a6591ca08f3bffad8ebc0fda 458 Gene3D G3DSA:1.10.275.10 5 132 8.1E-53 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal D172_017180 50e478c3a6591ca08f3bffad8ebc0fda 458 Gene3D G3DSA:1.10.40.30 402 453 7.8E-19 T 14-10-2018 D172_017180 50e478c3a6591ca08f3bffad8ebc0fda 458 SUPERFAMILY SSF48557 3 454 8.69E-136 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 D172_017180 50e478c3a6591ca08f3bffad8ebc0fda 458 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 456 74.886 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D172_017180 50e478c3a6591ca08f3bffad8ebc0fda 458 PRINTS PR00149 Fumarate lyase superfamily signature 265 292 3.8E-30 T 14-10-2018 IPR000362 Fumarate lyase family D172_017180 50e478c3a6591ca08f3bffad8ebc0fda 458 PRINTS PR00149 Fumarate lyase superfamily signature 174 192 3.8E-30 T 14-10-2018 IPR000362 Fumarate lyase family D172_017180 50e478c3a6591ca08f3bffad8ebc0fda 458 PRINTS PR00149 Fumarate lyase superfamily signature 128 146 3.8E-30 T 14-10-2018 IPR000362 Fumarate lyase family D172_017180 50e478c3a6591ca08f3bffad8ebc0fda 458 PRINTS PR00149 Fumarate lyase superfamily signature 311 327 3.8E-30 T 14-10-2018 IPR000362 Fumarate lyase family D172_017180 50e478c3a6591ca08f3bffad8ebc0fda 458 Pfam PF10415 Fumarase C C-terminus 402 454 4.6E-20 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 D172_017180 50e478c3a6591ca08f3bffad8ebc0fda 458 PRINTS PR00145 Argininosuccinate lyase family signature 169 189 1.8E-5 T 14-10-2018 D172_017180 50e478c3a6591ca08f3bffad8ebc0fda 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 327 1.8E-5 T 14-10-2018 D172_017180 50e478c3a6591ca08f3bffad8ebc0fda 458 PRINTS PR00145 Argininosuccinate lyase family signature 127 149 1.8E-5 T 14-10-2018 D172_000595 5fc77b8e5b4cb675e1c6b8514a064375 1154 Pfam PF02225 PA domain 398 483 6.6E-12 T 14-10-2018 IPR003137 PA domain D172_000595 5fc77b8e5b4cb675e1c6b8514a064375 1154 SUPERFAMILY SSF52743 152 621 8.9E-53 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D172_000595 5fc77b8e5b4cb675e1c6b8514a064375 1154 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 549 559 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site D172_000595 5fc77b8e5b4cb675e1c6b8514a064375 1154 PRINTS PR00723 Subtilisin serine protease family (S8) signature 239 252 4.1E-11 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related D172_000595 5fc77b8e5b4cb675e1c6b8514a064375 1154 PRINTS PR00723 Subtilisin serine protease family (S8) signature 167 186 4.1E-11 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related D172_000595 5fc77b8e5b4cb675e1c6b8514a064375 1154 PRINTS PR00723 Subtilisin serine protease family (S8) signature 548 564 4.1E-11 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related D172_000595 5fc77b8e5b4cb675e1c6b8514a064375 1154 SUPERFAMILY SSF52025 396 487 1.57E-8 T 14-10-2018 D172_000595 5fc77b8e5b4cb675e1c6b8514a064375 1154 Gene3D G3DSA:3.40.50.200 167 614 5.8E-71 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D172_000595 5fc77b8e5b4cb675e1c6b8514a064375 1154 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 1131 1152 5.1E-4 T 14-10-2018 IPR020008 GlyGly-CTERM domain D172_000595 5fc77b8e5b4cb675e1c6b8514a064375 1154 Gene3D G3DSA:3.50.30.30 361 549 5.8E-71 T 14-10-2018 D172_000595 5fc77b8e5b4cb675e1c6b8514a064375 1154 Pfam PF00082 Subtilase family 167 587 2.2E-38 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 D172_000595 5fc77b8e5b4cb675e1c6b8514a064375 1154 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 172 183 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site D172_009715 7fb92fcb0c9a9f9edc6d74cf2d8f4062 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 55 1.9E-10 T 14-10-2018 D172_009715 7fb92fcb0c9a9f9edc6d74cf2d8f4062 85 Gene3D G3DSA:3.40.1620.10 1 40 5.5E-6 T 14-10-2018 D172_009715 7fb92fcb0c9a9f9edc6d74cf2d8f4062 85 SUPERFAMILY SSF143120 1 72 7.72E-15 T 14-10-2018 IPR036165 YefM-like superfamily D172_009715 7fb92fcb0c9a9f9edc6d74cf2d8f4062 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 71 5.8E-14 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM D172_000930 b90894e33547c6346e38ca5eb7b4a536 616 Gene3D G3DSA:3.90.79.10 441 612 6.5E-22 T 14-10-2018 D172_000930 b90894e33547c6346e38ca5eb7b4a536 616 SUPERFAMILY SSF55811 479 599 3.52E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D172_000930 b90894e33547c6346e38ca5eb7b4a536 616 Pfam PF00293 NUDIX domain 480 599 5.4E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D172_005020 f7a1fc6f6760fd3300bea71a6accec21 302 SUPERFAMILY SSF52768 5 289 1.92E-71 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily D172_005020 f7a1fc6f6760fd3300bea71a6accec21 302 PRINTS PR01270 Histone deacetylase superfamily signature 120 143 8.2E-13 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D172_005020 f7a1fc6f6760fd3300bea71a6accec21 302 PRINTS PR01270 Histone deacetylase superfamily signature 228 238 8.2E-13 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D172_005020 f7a1fc6f6760fd3300bea71a6accec21 302 PRINTS PR01270 Histone deacetylase superfamily signature 154 169 8.2E-13 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D172_005020 f7a1fc6f6760fd3300bea71a6accec21 302 Gene3D G3DSA:3.40.800.20 9 301 2.7E-54 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D172_005020 f7a1fc6f6760fd3300bea71a6accec21 302 Pfam PF00850 Histone deacetylase domain 41 288 1.8E-42 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D172_013680 9206dc60253483371af750cbcce9ed19 172 Gene3D G3DSA:3.90.79.10 1 159 2.7E-49 T 14-10-2018 D172_013680 9206dc60253483371af750cbcce9ed19 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.9E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D172_013680 9206dc60253483371af750cbcce9ed19 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.9E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D172_013680 9206dc60253483371af750cbcce9ed19 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.323 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH D172_013680 9206dc60253483371af750cbcce9ed19 172 Pfam PF00293 NUDIX domain 7 146 1.6E-27 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D172_013680 9206dc60253483371af750cbcce9ed19 172 SUPERFAMILY SSF55811 7 159 1.3E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D172_013680 9206dc60253483371af750cbcce9ed19 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D172_014125 629219ee1a7af60fe67d34ec7c7bd03e 140 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 9 60 4.7E-12 T 14-10-2018 IPR025161 Putative transposase IS4/IS5 family D172_011345 55daa51228a0a19187a900d859a8f35f 445 Gene3D G3DSA:1.25.40.20 198 337 2.9E-18 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily D172_011345 55daa51228a0a19187a900d859a8f35f 445 Pfam PF12796 Ankyrin repeats (3 copies) 245 309 2.3E-10 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain D172_011345 55daa51228a0a19187a900d859a8f35f 445 SUPERFAMILY SSF48403 228 332 1.03E-18 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily D172_011345 55daa51228a0a19187a900d859a8f35f 445 SMART SM00248 279 308 0.011 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 D172_011345 55daa51228a0a19187a900d859a8f35f 445 SMART SM00248 247 276 0.18 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 D172_003160 9945f88e44c3896acdfb6c77062c2256 275 Pfam PF02666 Phosphatidylserine decarboxylase 51 250 2.2E-58 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 D172_003160 9945f88e44c3896acdfb6c77062c2256 275 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 1 274 43.406 T 14-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 D172_003160 9945f88e44c3896acdfb6c77062c2256 275 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 37 272 2.4E-79 T 14-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 D172_004185 492b2972b4600b848ac730510186110d 134 Gene3D G3DSA:3.30.428.10 1 134 1.4E-38 T 14-10-2018 IPR036265 HIT-like superfamily D172_004185 492b2972b4600b848ac730510186110d 134 SUPERFAMILY SSF54197 14 132 1.64E-32 T 14-10-2018 IPR036265 HIT-like superfamily D172_004185 492b2972b4600b848ac730510186110d 134 PIRSF PIRSF000714 5 134 1.2E-49 T 14-10-2018 IPR026026 Histidine triad hydrolase, Hint-type D172_004185 492b2972b4600b848ac730510186110d 134 Pfam PF01230 HIT domain 23 101 3.2E-11 T 14-10-2018 IPR001310 Histidine triad (HIT) protein D172_005255 ca6db883c36c273f517987fef5d57a6d 244 Gene3D G3DSA:3.40.50.1820 6 242 2.5E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_005255 ca6db883c36c273f517987fef5d57a6d 244 SUPERFAMILY SSF53474 7 244 9.82E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_005255 ca6db883c36c273f517987fef5d57a6d 244 Pfam PF01738 Dienelactone hydrolase family 18 242 9.4E-27 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 Pfam PF03461 TRCF domain 1015 1106 1.3E-27 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 SMART SM01058 485 582 1.9E-49 T 14-10-2018 IPR003711 CarD-like/TRCF domain D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 Gene3D G3DSA:3.90.1150.50 1010 1156 1.0E-43 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 Pfam PF02559 CarD-like/TRCF domain 486 581 1.3E-24 T 14-10-2018 IPR003711 CarD-like/TRCF domain D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 SMART SM00490 832 916 4.5E-19 T 14-10-2018 IPR001650 Helicase, C-terminal D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 SUPERFAMILY SSF141259 476 554 1.2E-22 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 SUPERFAMILY SSF52540 8 344 2.98E-103 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 SMART SM00982 1014 1114 7.9E-48 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 SUPERFAMILY SSF52540 530 789 1.24E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 SUPERFAMILY SSF143517 1001 1151 3.79E-42 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 Gene3D G3DSA:3.40.50.11140 357 458 5.1E-14 T 14-10-2018 D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 Pfam PF00270 DEAD/DEAH box helicase 611 771 4.5E-21 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 SMART SM00487 606 796 6.7E-37 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 Pfam PF00271 Helicase conserved C-terminal domain 812 915 1.2E-16 T 14-10-2018 IPR001650 Helicase, C-terminal D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 SUPERFAMILY SSF52540 353 472 9.03E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 Gene3D G3DSA:3.40.50.300 484 995 6.7E-237 T 14-10-2018 D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 Gene3D G3DSA:3.30.2060.10 131 216 3.5E-115 T 14-10-2018 D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1088 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 SUPERFAMILY SSF52540 788 996 1.59E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 30 1146 27.926 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 Gene3D G3DSA:3.40.50.300 548 787 6.7E-237 T 14-10-2018 D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 Gene3D G3DSA:3.40.50.11180 26 335 3.5E-115 T 14-10-2018 D172_006905 6f8308ffbcdc8fbf31f9740a079580da 1157 Gene3D G3DSA:2.30.30.840 489 547 6.7E-237 T 14-10-2018 D172_004665 464cc97f616b4ad92afce07ff37a2ce9 702 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 64 702 1.5E-70 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 D172_004665 464cc97f616b4ad92afce07ff37a2ce9 702 Gene3D G3DSA:2.170.130.10 45 169 9.6E-30 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_004665 464cc97f616b4ad92afce07ff37a2ce9 702 Pfam PF00593 TonB dependent receptor 252 701 9.0E-35 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_004665 464cc97f616b4ad92afce07ff37a2ce9 702 SUPERFAMILY SSF56935 35 702 3.66E-110 T 14-10-2018 D172_004665 464cc97f616b4ad92afce07ff37a2ce9 702 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 162 6.2E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_004665 464cc97f616b4ad92afce07ff37a2ce9 702 Gene3D G3DSA:2.40.170.20 170 702 2.4E-120 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_017270 587fc0e4ab7046e061eb248471a70255 672 Pfam PF00563 EAL domain 419 655 3.8E-70 T 14-10-2018 IPR001633 EAL domain D172_017270 587fc0e4ab7046e061eb248471a70255 672 SMART SM00304 168 221 3.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_017270 587fc0e4ab7046e061eb248471a70255 672 Pfam PF17152 Periplasmic sensor domain 42 99 7.0E-7 T 14-10-2018 IPR033417 Periplasmic sensor domain CHASE8 D172_017270 587fc0e4ab7046e061eb248471a70255 672 SUPERFAMILY SSF55073 250 404 5.81E-48 T 14-10-2018 IPR029787 Nucleotide cyclase D172_017270 587fc0e4ab7046e061eb248471a70255 672 Gene3D G3DSA:3.20.20.450 417 670 1.2E-88 T 14-10-2018 IPR035919 EAL domain superfamily D172_017270 587fc0e4ab7046e061eb248471a70255 672 Gene3D G3DSA:3.30.70.270 239 416 3.5E-59 T 14-10-2018 D172_017270 587fc0e4ab7046e061eb248471a70255 672 SMART SM00267 234 403 7.1E-58 T 14-10-2018 IPR000160 GGDEF domain D172_017270 587fc0e4ab7046e061eb248471a70255 672 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 241 402 6.7E-43 T 14-10-2018 IPR000160 GGDEF domain D172_017270 587fc0e4ab7046e061eb248471a70255 672 Pfam PF00990 Diguanylate cyclase, GGDEF domain 245 399 1.7E-46 T 14-10-2018 IPR000160 GGDEF domain D172_017270 587fc0e4ab7046e061eb248471a70255 672 Gene3D G3DSA:1.20.1480.50 132 228 5.0E-8 T 14-10-2018 D172_017270 587fc0e4ab7046e061eb248471a70255 672 SUPERFAMILY SSF158472 168 218 2.75E-5 T 14-10-2018 D172_017270 587fc0e4ab7046e061eb248471a70255 672 SMART SM00052 413 660 7.5E-97 T 14-10-2018 IPR001633 EAL domain D172_017270 587fc0e4ab7046e061eb248471a70255 672 SUPERFAMILY SSF141868 419 666 2.62E-82 T 14-10-2018 IPR035919 EAL domain superfamily D172_005025 ef2fe1169583bccf1819a9dc8ce6edf9 121 Gene3D G3DSA:2.40.10.220 1 121 1.5E-36 T 14-10-2018 D172_005025 ef2fe1169583bccf1819a9dc8ce6edf9 121 SUPERFAMILY SSF141371 1 117 7.85E-35 T 14-10-2018 D172_005025 ef2fe1169583bccf1819a9dc8ce6edf9 121 Pfam PF07238 PilZ domain 3 100 7.0E-13 T 14-10-2018 IPR009875 PilZ domain GO:0035438 D172_005025 ef2fe1169583bccf1819a9dc8ce6edf9 121 PIRSF PIRSF028141 1 120 4.5E-41 T 14-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type D172_000280 46f571061906a3054f159f6b3a7acd44 452 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.398 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 D172_000280 46f571061906a3054f159f6b3a7acd44 452 Gene3D G3DSA:2.160.10.10 225 452 5.6E-69 T 14-10-2018 D172_000280 46f571061906a3054f159f6b3a7acd44 452 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 392 425 1.3E-8 T 14-10-2018 IPR001451 Hexapeptide repeat D172_000280 46f571061906a3054f159f6b3a7acd44 452 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D172_000280 46f571061906a3054f159f6b3a7acd44 452 SUPERFAMILY SSF53448 2 249 8.97E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_000280 46f571061906a3054f159f6b3a7acd44 452 SUPERFAMILY SSF51161 252 435 6.42E-53 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily D172_000280 46f571061906a3054f159f6b3a7acd44 452 Pfam PF12804 MobA-like NTP transferase domain 6 127 1.6E-22 T 14-10-2018 IPR025877 MobA-like NTP transferase D172_000280 46f571061906a3054f159f6b3a7acd44 452 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 2.2E-190 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 D172_000280 46f571061906a3054f159f6b3a7acd44 452 Gene3D G3DSA:3.90.550.10 2 224 1.4E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_000280 46f571061906a3054f159f6b3a7acd44 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 283 312 1.8E-8 T 14-10-2018 IPR001451 Hexapeptide repeat D172_018820 48fd0dbd26486ad8b1216520a7f94478 219 Gene3D G3DSA:3.40.30.10 1 211 3.1E-69 T 14-10-2018 D172_018820 48fd0dbd26486ad8b1216520a7f94478 219 SUPERFAMILY SSF52833 3 215 7.27E-47 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_018820 48fd0dbd26486ad8b1216520a7f94478 219 Pfam PF01323 DSBA-like thioredoxin domain 5 207 6.7E-41 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 D172_007615 ccbac13c0350292472c2346bcbe94449 192 SUPERFAMILY SSF52218 3 190 2.33E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_007615 ccbac13c0350292472c2346bcbe94449 192 Pfam PF02525 Flavodoxin-like fold 3 165 2.5E-32 T 14-10-2018 IPR003680 Flavodoxin-like fold D172_007615 ccbac13c0350292472c2346bcbe94449 192 Gene3D G3DSA:3.40.50.360 2 190 9.7E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_015320 6d600064c32e6f5a42aa6818e3075769 385 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 380 4.8E-103 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D172_015320 6d600064c32e6f5a42aa6818e3075769 385 Gene3D G3DSA:3.90.1150.10 260 385 4.9E-35 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_015320 6d600064c32e6f5a42aa6818e3075769 385 SUPERFAMILY SSF53383 2 382 9.41E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_015320 6d600064c32e6f5a42aa6818e3075769 385 PIRSF PIRSF000390 1 385 5.8E-103 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase D172_015320 6d600064c32e6f5a42aa6818e3075769 385 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 383 6.4E-169 T 14-10-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase D172_015320 6d600064c32e6f5a42aa6818e3075769 385 Gene3D G3DSA:3.40.640.10 1 259 8.3E-84 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_012965 2283f70555701f545a88f10496023ba1 284 SMART SM00978 150 279 1.6E-34 T 14-10-2018 IPR007379 Tim44-like domain D172_012965 2283f70555701f545a88f10496023ba1 284 Pfam PF04280 Tim44-like domain 160 278 4.4E-12 T 14-10-2018 IPR007379 Tim44-like domain D172_012965 2283f70555701f545a88f10496023ba1 284 Gene3D G3DSA:3.10.450.240 159 282 4.5E-7 T 14-10-2018 D172_012965 2283f70555701f545a88f10496023ba1 284 SUPERFAMILY SSF54427 160 277 7.89E-14 T 14-10-2018 IPR032710 NTF2-like domain superfamily D172_005160 3ef1019fa45156162f466a367a763692 83 Gene3D G3DSA:1.50.10.150 1 82 3.8E-5 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily D172_014475 c3e0e457a5a95fa39f555f9669143e40 597 Gene3D G3DSA:3.30.70.270 158 343 2.6E-41 T 14-10-2018 D172_014475 c3e0e457a5a95fa39f555f9669143e40 597 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 161 330 1.8E-31 T 14-10-2018 IPR000160 GGDEF domain D172_014475 c3e0e457a5a95fa39f555f9669143e40 597 SUPERFAMILY SSF141868 349 594 2.35E-68 T 14-10-2018 IPR035919 EAL domain superfamily D172_014475 c3e0e457a5a95fa39f555f9669143e40 597 Pfam PF00563 EAL domain 348 585 9.3E-61 T 14-10-2018 IPR001633 EAL domain D172_014475 c3e0e457a5a95fa39f555f9669143e40 597 SUPERFAMILY SSF55073 168 333 2.63E-32 T 14-10-2018 IPR029787 Nucleotide cyclase D172_014475 c3e0e457a5a95fa39f555f9669143e40 597 SMART SM00052 337 590 7.5E-74 T 14-10-2018 IPR001633 EAL domain D172_014475 c3e0e457a5a95fa39f555f9669143e40 597 Gene3D G3DSA:3.20.20.450 344 595 5.9E-72 T 14-10-2018 IPR035919 EAL domain superfamily D172_014475 c3e0e457a5a95fa39f555f9669143e40 597 SMART SM00267 152 331 2.7E-37 T 14-10-2018 IPR000160 GGDEF domain D172_014475 c3e0e457a5a95fa39f555f9669143e40 597 Pfam PF00990 Diguanylate cyclase, GGDEF domain 163 327 9.5E-34 T 14-10-2018 IPR000160 GGDEF domain D172_019895 55d680272b453e32bff2ea83ff2a8e03 805 Gene3D G3DSA:2.170.130.10 38 167 1.4E-28 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_019895 55d680272b453e32bff2ea83ff2a8e03 805 Pfam PF00593 TonB dependent receptor 351 804 3.9E-29 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_019895 55d680272b453e32bff2ea83ff2a8e03 805 SUPERFAMILY SSF56935 20 804 9.52E-94 T 14-10-2018 D172_019895 55d680272b453e32bff2ea83ff2a8e03 805 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 156 4.1E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_005495 28164af358f58259a66482b278e51801 333 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 1.6E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_005495 28164af358f58259a66482b278e51801 333 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 26 3.1E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_005495 28164af358f58259a66482b278e51801 333 Pfam PF16074 Type IV Pilus-assembly protein W 194 325 4.5E-27 T 14-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 D172_005495 28164af358f58259a66482b278e51801 333 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_005495 28164af358f58259a66482b278e51801 333 SUPERFAMILY SSF54523 6 100 3.53E-5 T 14-10-2018 D172_010745 1e055479a4ff4da1ddf65fa28c5abec2 463 Pfam PF00696 Amino acid kinase family 18 289 2.1E-48 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D172_010745 1e055479a4ff4da1ddf65fa28c5abec2 463 Gene3D G3DSA:3.40.1160.10 19 301 4.0E-93 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D172_010745 1e055479a4ff4da1ddf65fa28c5abec2 463 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 16 457 5.0E-113 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_010745 1e055479a4ff4da1ddf65fa28c5abec2 463 ProSitePatterns PS00324 Aspartokinase signature. 19 27 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_010745 1e055479a4ff4da1ddf65fa28c5abec2 463 SUPERFAMILY SSF55021 308 403 3.89E-16 T 14-10-2018 D172_010745 1e055479a4ff4da1ddf65fa28c5abec2 463 PIRSF PIRSF000726 15 462 5.7E-114 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_010745 1e055479a4ff4da1ddf65fa28c5abec2 463 SUPERFAMILY SSF55021 387 459 7.2E-8 T 14-10-2018 D172_010745 1e055479a4ff4da1ddf65fa28c5abec2 463 Gene3D G3DSA:3.30.70.260 315 455 2.8E-39 T 14-10-2018 D172_010745 1e055479a4ff4da1ddf65fa28c5abec2 463 SUPERFAMILY SSF53633 17 303 3.67E-69 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D172_010745 1e055479a4ff4da1ddf65fa28c5abec2 463 Gene3D G3DSA:1.20.120.1320 55 146 4.0E-93 T 14-10-2018 D172_010745 1e055479a4ff4da1ddf65fa28c5abec2 463 Gene3D G3DSA:3.30.70.260 321 393 2.8E-39 T 14-10-2018 D172_014490 9b9948e1003bbd88b69388d9ff93246e 612 SMART SM00116 222 270 4.7E-6 T 14-10-2018 IPR000644 CBS domain D172_014490 9b9948e1003bbd88b69388d9ff93246e 612 SMART SM00116 158 205 3.6E-6 T 14-10-2018 IPR000644 CBS domain D172_014490 9b9948e1003bbd88b69388d9ff93246e 612 Pfam PF00571 CBS domain 151 204 5.7E-9 T 14-10-2018 IPR000644 CBS domain D172_014490 9b9948e1003bbd88b69388d9ff93246e 612 Pfam PF00571 CBS domain 215 268 2.3E-11 T 14-10-2018 IPR000644 CBS domain D172_014490 9b9948e1003bbd88b69388d9ff93246e 612 Pfam PF03445 Putative nucleotidyltransferase DUF294 295 431 3.1E-40 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 D172_014490 9b9948e1003bbd88b69388d9ff93246e 612 Gene3D G3DSA:2.60.120.10 17 143 1.9E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_014490 9b9948e1003bbd88b69388d9ff93246e 612 SUPERFAMILY SSF54631 146 267 8.59E-32 T 14-10-2018 D172_014490 9b9948e1003bbd88b69388d9ff93246e 612 SUPERFAMILY SSF51206 6 134 7.33E-11 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like D172_014490 9b9948e1003bbd88b69388d9ff93246e 612 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 467 607 5.1E-41 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding D172_014490 9b9948e1003bbd88b69388d9ff93246e 612 Gene3D G3DSA:3.10.580.10 147 276 5.2E-33 T 14-10-2018 D172_018285 47c0f1a8c2b7de37d53c99441a379f6e 820 SUPERFAMILY SSF53474 544 800 1.25E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_018285 47c0f1a8c2b7de37d53c99441a379f6e 820 SUPERFAMILY SSF82171 95 533 3.27E-18 T 14-10-2018 D172_018285 47c0f1a8c2b7de37d53c99441a379f6e 820 Gene3D G3DSA:3.40.50.1820 539 809 3.5E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_018285 47c0f1a8c2b7de37d53c99441a379f6e 820 Pfam PF00326 Prolyl oligopeptidase family 646 800 1.5E-24 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 D172_018285 47c0f1a8c2b7de37d53c99441a379f6e 820 Gene3D G3DSA:2.120.10.30 84 211 6.9E-9 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_009130 46e2133fca3d0e07acb83f5748356304 631 Gene3D G3DSA:2.60.120.10 1 136 5.3E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_009130 46e2133fca3d0e07acb83f5748356304 631 Pfam PF03445 Putative nucleotidyltransferase DUF294 307 444 7.1E-45 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 D172_009130 46e2133fca3d0e07acb83f5748356304 631 SUPERFAMILY SSF54631 146 280 2.65E-29 T 14-10-2018 D172_009130 46e2133fca3d0e07acb83f5748356304 631 SUPERFAMILY SSF51206 8 126 1.57E-24 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like D172_009130 46e2133fca3d0e07acb83f5748356304 631 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 481 624 3.5E-43 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding D172_009130 46e2133fca3d0e07acb83f5748356304 631 SMART SM00116 235 282 9.4E-9 T 14-10-2018 IPR000644 CBS domain D172_009130 46e2133fca3d0e07acb83f5748356304 631 SMART SM00116 159 218 2.3E-7 T 14-10-2018 IPR000644 CBS domain D172_009130 46e2133fca3d0e07acb83f5748356304 631 Pfam PF00027 Cyclic nucleotide-binding domain 37 117 6.9E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain D172_009130 46e2133fca3d0e07acb83f5748356304 631 SMART SM00100 17 134 1.3E-4 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain D172_009130 46e2133fca3d0e07acb83f5748356304 631 Gene3D G3DSA:3.10.580.10 144 284 4.3E-32 T 14-10-2018 D172_009130 46e2133fca3d0e07acb83f5748356304 631 Pfam PF00571 CBS domain 152 217 1.8E-10 T 14-10-2018 IPR000644 CBS domain D172_009130 46e2133fca3d0e07acb83f5748356304 631 Pfam PF00571 CBS domain 228 280 1.4E-11 T 14-10-2018 IPR000644 CBS domain D172_019445 2d1832f44e118627d7d89a725842e1de 426 Pfam PF08014 Domain of unknown function (DUF1704) 38 409 3.2E-125 T 14-10-2018 IPR012548 Protein of unknown function DUF1704 D172_019445 2d1832f44e118627d7d89a725842e1de 426 SMART SM01154 37 413 3.7E-171 T 14-10-2018 IPR012548 Protein of unknown function DUF1704 D172_019445 2d1832f44e118627d7d89a725842e1de 426 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 17 405 4.9E-102 T 14-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA D172_005485 873aea2fa8227f2fb7a497e671d48733 233 Pfam PF00072 Response regulator receiver domain 3 112 5.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005485 873aea2fa8227f2fb7a497e671d48733 233 SUPERFAMILY SSF52172 1 123 6.55E-32 T 14-10-2018 IPR011006 CheY-like superfamily D172_005485 873aea2fa8227f2fb7a497e671d48733 233 Gene3D G3DSA:2.40.50.40 132 196 1.8E-6 T 14-10-2018 D172_005485 873aea2fa8227f2fb7a497e671d48733 233 SMART SM00448 1 112 3.1E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005485 873aea2fa8227f2fb7a497e671d48733 233 Pfam PF04397 LytTr DNA-binding domain 139 233 5.6E-20 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 D172_005485 873aea2fa8227f2fb7a497e671d48733 233 SMART SM00850 137 233 2.8E-20 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 D172_005485 873aea2fa8227f2fb7a497e671d48733 233 Gene3D G3DSA:3.40.50.2300 1 131 2.7E-32 T 14-10-2018 D172_009400 47d5977eeb78528f78ba87fb1dd4e975 257 Gene3D G3DSA:2.60.120.620 1 255 2.6E-70 T 14-10-2018 D172_009400 47d5977eeb78528f78ba87fb1dd4e975 257 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 14 215 1.5E-35 T 14-10-2018 IPR008775 Phytanoyl-CoA dioxygenase D172_009400 47d5977eeb78528f78ba87fb1dd4e975 257 SUPERFAMILY SSF51197 4 239 1.19E-56 T 14-10-2018 D172_012540 5d666ebb5403b911fe58b9c190fb993a 381 Pfam PF01734 Patatin-like phospholipase 15 222 9.4E-19 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 D172_012540 5d666ebb5403b911fe58b9c190fb993a 381 Gene3D G3DSA:3.40.1090.10 1 120 2.5E-19 T 14-10-2018 D172_012540 5d666ebb5403b911fe58b9c190fb993a 381 SUPERFAMILY SSF52151 9 309 1.23E-45 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D172_014350 162f92e085e8453ca738ae64e3f97122 377 SUPERFAMILY SSF53597 153 369 1.19E-55 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 D172_014350 162f92e085e8453ca738ae64e3f97122 377 Gene3D G3DSA:3.40.140.10 3 148 3.9E-42 T 14-10-2018 D172_014350 162f92e085e8453ca738ae64e3f97122 377 PIRSF PIRSF006769 6 373 2.0E-122 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 D172_014350 162f92e085e8453ca738ae64e3f97122 377 Gene3D G3DSA:3.40.430.10 149 374 1.8E-69 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 D172_014350 162f92e085e8453ca738ae64e3f97122 377 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 107 1.3E-19 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain D172_014350 162f92e085e8453ca738ae64e3f97122 377 Pfam PF01872 RibD C-terminal domain 155 366 6.7E-48 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 D172_014350 162f92e085e8453ca738ae64e3f97122 377 SUPERFAMILY SSF53927 11 153 1.62E-45 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 D172_014350 162f92e085e8453ca738ae64e3f97122 377 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 15 367 3.2E-125 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 D172_014350 162f92e085e8453ca738ae64e3f97122 377 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 58 96 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 D172_014350 162f92e085e8453ca738ae64e3f97122 377 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 154 370 2.4E-60 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 D172_011920 cb68153da092174415b96902b6c9ea7e 513 SUPERFAMILY SSF109604 322 502 4.71E-40 T 14-10-2018 D172_011920 cb68153da092174415b96902b6c9ea7e 513 Pfam PF01966 HD domain 339 461 2.7E-21 T 14-10-2018 IPR006674 HD domain D172_011920 cb68153da092174415b96902b6c9ea7e 513 Pfam PF00072 Response regulator receiver domain 24 134 4.0E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_011920 cb68153da092174415b96902b6c9ea7e 513 Pfam PF11849 Domain of unknown function (DUF3369) 144 316 3.9E-47 T 14-10-2018 IPR021800 Domain of unknown function DUF3369 D172_011920 cb68153da092174415b96902b6c9ea7e 513 Gene3D G3DSA:1.10.3210.10 313 513 9.7E-72 T 14-10-2018 D172_011920 cb68153da092174415b96902b6c9ea7e 513 SMART SM00448 22 144 6.8E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_011920 cb68153da092174415b96902b6c9ea7e 513 SMART SM00471 334 471 4.7E-11 T 14-10-2018 IPR003607 HD/PDEase domain D172_011920 cb68153da092174415b96902b6c9ea7e 513 Gene3D G3DSA:3.40.50.2300 22 162 5.7E-17 T 14-10-2018 D172_011920 cb68153da092174415b96902b6c9ea7e 513 SUPERFAMILY SSF52172 22 166 4.98E-15 T 14-10-2018 IPR011006 CheY-like superfamily D172_000140 faedc507c7d4dabfc8ded3752badf7e3 534 Pfam PF07693 KAP family P-loop domain 30 353 7.1E-29 T 14-10-2018 IPR011646 KAP family P-loop domain D172_000140 faedc507c7d4dabfc8ded3752badf7e3 534 SUPERFAMILY SSF52540 23 266 4.07E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_010970 45bd35fdf67409e2496cc791ba03919c 437 Gene3D G3DSA:3.30.565.10 304 437 2.2E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_010970 45bd35fdf67409e2496cc791ba03919c 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 1.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_010970 45bd35fdf67409e2496cc791ba03919c 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 1.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_010970 45bd35fdf67409e2496cc791ba03919c 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 1.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_010970 45bd35fdf67409e2496cc791ba03919c 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 1.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_010970 45bd35fdf67409e2496cc791ba03919c 437 SMART SM00387 332 437 9.2E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_010970 45bd35fdf67409e2496cc791ba03919c 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 435 1.9E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_010970 45bd35fdf67409e2496cc791ba03919c 437 SUPERFAMILY SSF55874 298 436 1.44E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_010970 45bd35fdf67409e2496cc791ba03919c 437 SUPERFAMILY SSF47384 225 298 4.9E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_006810 2c3e6fdb58a67106b6e9edc575230267 441 Gene3D G3DSA:3.30.450.20 6 142 2.0E-13 T 14-10-2018 D172_006810 2c3e6fdb58a67106b6e9edc575230267 441 SUPERFAMILY SSF55785 37 127 1.12E-13 T 14-10-2018 IPR035965 PAS domain superfamily D172_006810 2c3e6fdb58a67106b6e9edc575230267 441 Gene3D G3DSA:1.10.287.950 245 440 1.9E-42 T 14-10-2018 D172_006810 2c3e6fdb58a67106b6e9edc575230267 441 SUPERFAMILY SSF55785 153 258 8.9E-19 T 14-10-2018 IPR035965 PAS domain superfamily D172_006810 2c3e6fdb58a67106b6e9edc575230267 441 SMART SM00091 19 88 0.016 T 14-10-2018 IPR000014 PAS domain D172_006810 2c3e6fdb58a67106b6e9edc575230267 441 SMART SM00091 141 211 11.0 T 14-10-2018 IPR000014 PAS domain D172_006810 2c3e6fdb58a67106b6e9edc575230267 441 SMART SM00283 230 440 2.1E-22 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_006810 2c3e6fdb58a67106b6e9edc575230267 441 Gene3D G3DSA:3.30.450.20 143 244 1.9E-11 T 14-10-2018 D172_006810 2c3e6fdb58a67106b6e9edc575230267 441 SUPERFAMILY SSF58104 242 435 6.8E-51 T 14-10-2018 D172_006810 2c3e6fdb58a67106b6e9edc575230267 441 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 303 432 1.9E-37 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_006810 2c3e6fdb58a67106b6e9edc575230267 441 Pfam PF13426 PAS domain 40 126 1.0E-9 T 14-10-2018 IPR000014 PAS domain D172_006810 2c3e6fdb58a67106b6e9edc575230267 441 Pfam PF08447 PAS fold 166 251 1.8E-11 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 D172_006810 2c3e6fdb58a67106b6e9edc575230267 441 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 40 130 3.2E-8 T 14-10-2018 IPR000014 PAS domain D172_006810 2c3e6fdb58a67106b6e9edc575230267 441 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 262 2.4E-14 T 14-10-2018 IPR000014 PAS domain D172_009475 feff2342a44a1be34c098d25588d9128 332 SUPERFAMILY SSF63829 39 331 1.79E-41 T 14-10-2018 D172_009475 feff2342a44a1be34c098d25588d9128 332 Gene3D G3DSA:2.120.10.30 40 332 9.8E-83 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_009475 feff2342a44a1be34c098d25588d9128 332 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 68 323 3.4E-36 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region D172_006860 9fcdf69182f87576ca238ac60d77b5ba 344 PRINTS PR00605 Class IC cytochrome C signature 267 278 3.0E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 D172_006860 9fcdf69182f87576ca238ac60d77b5ba 344 PRINTS PR00605 Class IC cytochrome C signature 315 337 3.0E-5 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 D172_006860 9fcdf69182f87576ca238ac60d77b5ba 344 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 172 246 6.1E-14 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_006860 9fcdf69182f87576ca238ac60d77b5ba 344 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 258 337 6.1E-10 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_006860 9fcdf69182f87576ca238ac60d77b5ba 344 SUPERFAMILY SSF46626 55 256 4.22E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_006860 9fcdf69182f87576ca238ac60d77b5ba 344 Gene3D G3DSA:1.10.760.10 164 340 1.7E-68 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_006860 9fcdf69182f87576ca238ac60d77b5ba 344 PIRSF PIRSF000006 1 344 5.1E-89 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III D172_006860 9fcdf69182f87576ca238ac60d77b5ba 344 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 37 82 4.6E-22 T 14-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal D172_006860 9fcdf69182f87576ca238ac60d77b5ba 344 Gene3D G3DSA:1.10.760.10 227 317 1.7E-68 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_006860 9fcdf69182f87576ca238ac60d77b5ba 344 SUPERFAMILY SSF46626 255 342 9.6E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_006860 9fcdf69182f87576ca238ac60d77b5ba 344 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 170 342 8.7E-55 T 14-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III D172_006860 9fcdf69182f87576ca238ac60d77b5ba 344 Gene3D G3DSA:1.20.58.1490 1 93 1.8E-31 T 14-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily D172_004290 8b253b06eade17b79bfaffbf71f506d6 672 TIGRFAM TIGR03788 marine_srt_targ: marine proteobacterial sortase target protein 51 655 3.8E-242 T 14-10-2018 IPR022440 Conserved hypothetical protein CHP03788 D172_004290 8b253b06eade17b79bfaffbf71f506d6 672 SMART SM00327 320 493 1.4E-13 T 14-10-2018 IPR002035 von Willebrand factor, type A D172_004290 8b253b06eade17b79bfaffbf71f506d6 672 SMART SM00609 46 162 9.7E-9 T 14-10-2018 IPR013694 VIT domain D172_004290 8b253b06eade17b79bfaffbf71f506d6 672 Pfam PF13768 von Willebrand factor type A domain 322 473 3.3E-21 T 14-10-2018 IPR002035 von Willebrand factor, type A D172_004290 8b253b06eade17b79bfaffbf71f506d6 672 Gene3D G3DSA:3.40.50.410 321 492 1.0E-30 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily D172_004290 8b253b06eade17b79bfaffbf71f506d6 672 Pfam PF08487 Vault protein inter-alpha-trypsin domain 54 160 1.7E-30 T 14-10-2018 IPR013694 VIT domain D172_004290 8b253b06eade17b79bfaffbf71f506d6 672 SUPERFAMILY SSF53300 320 486 6.02E-26 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily D172_011350 9955a46d6ad1ff9f52428bd255d4a706 197 PIRSF PIRSF004649 1 197 2.1E-54 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC D172_011350 9955a46d6ad1ff9f52428bd255d4a706 197 Gene3D G3DSA:3.10.450.710 22 197 1.3E-35 T 14-10-2018 D172_011350 9955a46d6ad1ff9f52428bd255d4a706 197 Pfam PF05494 MlaC protein 32 195 2.4E-40 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC D172_001980 6814667bdd77b4e9d9609cf95153352b 308 Gene3D G3DSA:3.40.190.10 165 267 4.9E-42 T 14-10-2018 D172_001980 6814667bdd77b4e9d9609cf95153352b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_001980 6814667bdd77b4e9d9609cf95153352b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_001980 6814667bdd77b4e9d9609cf95153352b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_001980 6814667bdd77b4e9d9609cf95153352b 308 SUPERFAMILY SSF46785 6 82 2.36E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_001980 6814667bdd77b4e9d9609cf95153352b 308 Gene3D G3DSA:1.10.10.10 3 88 3.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_001980 6814667bdd77b4e9d9609cf95153352b 308 Pfam PF03466 LysR substrate binding domain 93 292 6.3E-28 T 14-10-2018 IPR005119 LysR, substrate-binding D172_001980 6814667bdd77b4e9d9609cf95153352b 308 Gene3D G3DSA:3.40.190.10 96 289 4.9E-42 T 14-10-2018 D172_001980 6814667bdd77b4e9d9609cf95153352b 308 SUPERFAMILY SSF53850 92 293 3.8E-26 T 14-10-2018 D172_001980 6814667bdd77b4e9d9609cf95153352b 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_011935 7339fd7b5b61bc9654c2af7b2881f5a0 421 PIRSF PIRSF000445 4 421 5.2E-151 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D172_011935 7339fd7b5b61bc9654c2af7b2881f5a0 421 Gene3D G3DSA:3.40.50.720 162 314 3.0E-43 T 14-10-2018 D172_011935 7339fd7b5b61bc9654c2af7b2881f5a0 421 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 6 418 8.4E-142 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D172_011935 7339fd7b5b61bc9654c2af7b2881f5a0 421 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 5 416 30.691 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D172_011935 7339fd7b5b61bc9654c2af7b2881f5a0 421 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 9 157 9.1E-52 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D172_011935 7339fd7b5b61bc9654c2af7b2881f5a0 421 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 321 416 3.1E-19 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D172_011935 7339fd7b5b61bc9654c2af7b2881f5a0 421 SUPERFAMILY SSF69742 4 159 3.92E-49 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D172_011935 7339fd7b5b61bc9654c2af7b2881f5a0 421 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 173 307 1.5E-46 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase D172_011935 7339fd7b5b61bc9654c2af7b2881f5a0 421 SUPERFAMILY SSF69075 318 419 3.01E-24 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D172_011935 7339fd7b5b61bc9654c2af7b2881f5a0 421 Gene3D G3DSA:3.30.460.30 4 159 1.7E-57 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D172_011935 7339fd7b5b61bc9654c2af7b2881f5a0 421 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 100 123 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 D172_011935 7339fd7b5b61bc9654c2af7b2881f5a0 421 SUPERFAMILY SSF51735 163 316 2.19E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_014275 b4a38dc08c7edd7cc39bf4fb88e0e23b 436 SUPERFAMILY SSF55031 213 315 1.14E-28 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain D172_014275 b4a38dc08c7edd7cc39bf4fb88e0e23b 436 Pfam PF01546 Peptidase family M20/M25/M40 90 390 5.3E-24 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 D172_014275 b4a38dc08c7edd7cc39bf4fb88e0e23b 436 Pfam PF07687 Peptidase dimerisation domain 214 304 3.8E-13 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain D172_014275 b4a38dc08c7edd7cc39bf4fb88e0e23b 436 Gene3D G3DSA:3.40.630.10 36 413 4.1E-113 T 14-10-2018 D172_014275 b4a38dc08c7edd7cc39bf4fb88e0e23b 436 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 39 391 3.1E-83 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 D172_014275 b4a38dc08c7edd7cc39bf4fb88e0e23b 436 SUPERFAMILY SSF53187 28 435 2.61E-71 T 14-10-2018 D172_014275 b4a38dc08c7edd7cc39bf4fb88e0e23b 436 Gene3D G3DSA:3.30.70.360 210 330 4.1E-113 T 14-10-2018 D172_014275 b4a38dc08c7edd7cc39bf4fb88e0e23b 436 PIRSF PIRSF005962 20 436 1.2E-100 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 D172_016100 304ab02a41fedf1893761768a3f18bc8 517 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 305 1.8E-77 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D172_016100 304ab02a41fedf1893761768a3f18bc8 517 Gene3D G3DSA:3.40.50.1100 20 316 3.4E-124 T 14-10-2018 D172_016100 304ab02a41fedf1893761768a3f18bc8 517 SUPERFAMILY SSF53686 8 353 2.1E-92 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D172_016100 304ab02a41fedf1893761768a3f18bc8 517 Gene3D G3DSA:3.40.50.1100 53 146 3.4E-124 T 14-10-2018 D172_016100 304ab02a41fedf1893761768a3f18bc8 517 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 45 58 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 D172_016100 304ab02a41fedf1893761768a3f18bc8 517 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 419 502 2.9E-23 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 D172_016100 304ab02a41fedf1893761768a3f18bc8 517 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 318 408 1.2E-24 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 D172_016100 304ab02a41fedf1893761768a3f18bc8 517 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 7 502 4.7E-219 T 14-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 D172_016100 304ab02a41fedf1893761768a3f18bc8 517 SUPERFAMILY SSF55021 409 502 6.64E-25 T 14-10-2018 D172_016100 304ab02a41fedf1893761768a3f18bc8 517 Gene3D G3DSA:3.40.1020.10 327 504 6.5E-69 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 D172_015740 a1704ce1bfe4918b676eb99aef245ae4 159 PIRSF PIRSF018472 1 159 6.4E-49 T 14-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type D172_015740 a1704ce1bfe4918b676eb99aef245ae4 159 Pfam PF04093 rod shape-determining protein MreD 3 151 8.4E-32 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 D172_015740 a1704ce1bfe4918b676eb99aef245ae4 159 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 7 151 1.9E-41 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 D172_020390 ae4fddc9c444b900ecbce12f04d7463f 357 SUPERFAMILY SSF56112 21 348 1.6E-49 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily D172_020390 ae4fddc9c444b900ecbce12f04d7463f 357 Gene3D G3DSA:3.90.1200.10 123 350 9.1E-59 T 14-10-2018 D172_020390 ae4fddc9c444b900ecbce12f04d7463f 357 Pfam PF01636 Phosphotransferase enzyme family 40 273 1.6E-33 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase D172_020390 ae4fddc9c444b900ecbce12f04d7463f 357 Gene3D G3DSA:3.30.200.20 17 118 3.1E-25 T 14-10-2018 D172_018850 714093b42166ce61c35cc7c52089081d 308 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 167 280 4.1E-22 T 14-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 D172_018850 714093b42166ce61c35cc7c52089081d 308 Gene3D G3DSA:3.40.140.10 195 304 2.4E-12 T 14-10-2018 D172_018850 714093b42166ce61c35cc7c52089081d 308 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 113 147 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 D172_018850 714093b42166ce61c35cc7c52089081d 308 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 67 151 5.2E-8 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain D172_018850 714093b42166ce61c35cc7c52089081d 308 SUPERFAMILY SSF53927 33 156 8.86E-28 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 D172_018850 714093b42166ce61c35cc7c52089081d 308 Gene3D G3DSA:3.40.140.10 37 188 2.5E-41 T 14-10-2018 D172_018850 714093b42166ce61c35cc7c52089081d 308 PIRSF PIRSF006334 23 306 8.5E-59 T 14-10-2018 D172_018850 714093b42166ce61c35cc7c52089081d 308 SUPERFAMILY SSF53927 164 269 1.37E-16 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 D172_020570 b1c21b02c7b9d2796fd7e415d870e5cc 678 Gene3D G3DSA:1.10.1200.10 573 652 4.7E-13 T 14-10-2018 IPR036736 ACP-like superfamily D172_020570 b1c21b02c7b9d2796fd7e415d870e5cc 678 SUPERFAMILY SSF52777 106 307 8.15E-22 T 14-10-2018 D172_020570 b1c21b02c7b9d2796fd7e415d870e5cc 678 SUPERFAMILY SSF47336 9 78 4.84E-9 T 14-10-2018 IPR036736 ACP-like superfamily D172_020570 b1c21b02c7b9d2796fd7e415d870e5cc 678 Pfam PF00668 Condensation domain 147 535 2.0E-24 T 14-10-2018 IPR001242 Condensation domain D172_020570 b1c21b02c7b9d2796fd7e415d870e5cc 678 Gene3D G3DSA:1.10.1200.10 3 81 7.2E-19 T 14-10-2018 IPR036736 ACP-like superfamily D172_020570 b1c21b02c7b9d2796fd7e415d870e5cc 678 Gene3D G3DSA:3.30.559.30 295 544 1.1E-66 T 14-10-2018 D172_020570 b1c21b02c7b9d2796fd7e415d870e5cc 678 SUPERFAMILY SSF47336 574 641 1.31E-10 T 14-10-2018 IPR036736 ACP-like superfamily D172_020570 b1c21b02c7b9d2796fd7e415d870e5cc 678 Gene3D G3DSA:3.30.559.10 103 289 3.2E-41 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D172_020570 b1c21b02c7b9d2796fd7e415d870e5cc 678 SUPERFAMILY SSF52777 301 536 2.67E-37 T 14-10-2018 D172_020570 b1c21b02c7b9d2796fd7e415d870e5cc 678 Pfam PF00550 Phosphopantetheine attachment site 577 640 1.4E-8 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain D172_020570 b1c21b02c7b9d2796fd7e415d870e5cc 678 Pfam PF00550 Phosphopantetheine attachment site 13 77 2.3E-4 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain D172_016110 60ee476fd2348ace0fff7dcdf740612a 81 SUPERFAMILY SSF55021 1 72 3.51E-9 T 14-10-2018 D172_016110 60ee476fd2348ace0fff7dcdf740612a 81 Pfam PF13710 ACT domain 15 70 8.4E-19 T 14-10-2018 D172_016110 60ee476fd2348ace0fff7dcdf740612a 81 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 70 0.001 T 14-10-2018 D172_013760 d19b39aa0d43eaab8aec13566dcc6947 204 SUPERFAMILY SSF89069 11 71 2.75E-7 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 D172_013760 d19b39aa0d43eaab8aec13566dcc6947 204 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 135 186 1.9E-11 T 14-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal D172_013760 d19b39aa0d43eaab8aec13566dcc6947 204 PIRSF PIRSF016938 6 203 1.5E-24 T 14-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 D172_013760 d19b39aa0d43eaab8aec13566dcc6947 204 Gene3D G3DSA:1.10.10.880 9 71 9.0E-11 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 D172_013760 d19b39aa0d43eaab8aec13566dcc6947 204 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 11 84 5.2E-13 T 14-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 D172_012270 9299235f409fa62e662d163a60549030 174 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 7 162 3.6E-36 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 D172_012270 9299235f409fa62e662d163a60549030 174 Pfam PF00293 NUDIX domain 31 160 1.0E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D172_012270 9299235f409fa62e662d163a60549030 174 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 5 174 30.511 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 D172_012270 9299235f409fa62e662d163a60549030 174 Gene3D G3DSA:3.90.79.10 1 171 8.0E-52 T 14-10-2018 D172_012270 9299235f409fa62e662d163a60549030 174 SUPERFAMILY SSF55811 5 168 1.04E-45 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D172_012270 9299235f409fa62e662d163a60549030 174 PIRSF PIRSF018427 1 172 3.3E-48 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 D172_003040 b6731dab4a9fe3317f94d704e379bffc 458 Pfam PF03553 Na+/H+ antiporter family 171 454 1.0E-46 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 D172_005085 20452aa7dbe15af57d8276557d93c8b4 154 SUPERFAMILY SSF54427 27 152 8.31E-8 T 14-10-2018 IPR032710 NTF2-like domain superfamily D172_005085 20452aa7dbe15af57d8276557d93c8b4 154 Gene3D G3DSA:3.10.450.50 35 150 1.6E-7 T 14-10-2018 D172_018660 81faddac867d5c2fc5d1b7a4e9f7bfd0 154 PRINTS PR00601 Bacterioferritin signature 23 43 3.3E-54 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018660 81faddac867d5c2fc5d1b7a4e9f7bfd0 154 PRINTS PR00601 Bacterioferritin signature 44 64 3.3E-54 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018660 81faddac867d5c2fc5d1b7a4e9f7bfd0 154 PRINTS PR00601 Bacterioferritin signature 107 127 3.3E-54 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018660 81faddac867d5c2fc5d1b7a4e9f7bfd0 154 PRINTS PR00601 Bacterioferritin signature 3 22 3.3E-54 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018660 81faddac867d5c2fc5d1b7a4e9f7bfd0 154 PRINTS PR00601 Bacterioferritin signature 86 106 3.3E-54 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018660 81faddac867d5c2fc5d1b7a4e9f7bfd0 154 PRINTS PR00601 Bacterioferritin signature 65 85 3.3E-54 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018660 81faddac867d5c2fc5d1b7a4e9f7bfd0 154 PRINTS PR00601 Bacterioferritin signature 128 149 3.3E-54 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018660 81faddac867d5c2fc5d1b7a4e9f7bfd0 154 SUPERFAMILY SSF47240 1 154 1.99E-45 T 14-10-2018 IPR009078 Ferritin-like superfamily D172_018660 81faddac867d5c2fc5d1b7a4e9f7bfd0 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 2.2E-64 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018660 81faddac867d5c2fc5d1b7a4e9f7bfd0 154 Pfam PF00210 Ferritin-like domain 8 137 8.3E-33 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 D172_018660 81faddac867d5c2fc5d1b7a4e9f7bfd0 154 Gene3D G3DSA:1.20.1260.10 1 154 2.8E-56 T 14-10-2018 IPR012347 Ferritin-like D172_018660 81faddac867d5c2fc5d1b7a4e9f7bfd0 154 PIRSF PIRSF002560 1 154 6.3E-59 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018660 81faddac867d5c2fc5d1b7a4e9f7bfd0 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_020250 14bdb6308463c0b23d215a152e0f3515 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.1E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020250 14bdb6308463c0b23d215a152e0f3515 301 Gene3D G3DSA:1.10.10.10 3 89 9.8E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_020250 14bdb6308463c0b23d215a152e0f3515 301 SUPERFAMILY SSF53850 89 295 1.99E-45 T 14-10-2018 D172_020250 14bdb6308463c0b23d215a152e0f3515 301 Pfam PF03466 LysR substrate binding domain 88 287 3.2E-41 T 14-10-2018 IPR005119 LysR, substrate-binding D172_020250 14bdb6308463c0b23d215a152e0f3515 301 SUPERFAMILY SSF46785 4 88 5.36E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_020250 14bdb6308463c0b23d215a152e0f3515 301 Gene3D G3DSA:3.40.190.10 91 287 1.6E-64 T 14-10-2018 D172_020250 14bdb6308463c0b23d215a152e0f3515 301 Gene3D G3DSA:3.40.190.10 163 262 1.6E-64 T 14-10-2018 D172_020010 ce67fb7e5afa5f655e78203b24f70c32 63 Pfam PF09962 Uncharacterized conserved protein (DUF2196) 4 62 8.4E-32 T 14-10-2018 IPR019240 Protein of unknown function DUF2196 D172_020010 ce67fb7e5afa5f655e78203b24f70c32 63 TIGRFAM TIGR03833 TIGR03833: conserved hypothetical protein 4 62 3.0E-34 T 14-10-2018 IPR019240 Protein of unknown function DUF2196 D172_017110 cbccf6bc4b998e1dda6995e00a978be8 480 SUPERFAMILY SSF46785 12 81 5.65E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_017110 cbccf6bc4b998e1dda6995e00a978be8 480 Pfam PF00155 Aminotransferase class I and II 129 458 2.2E-30 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D172_017110 cbccf6bc4b998e1dda6995e00a978be8 480 Gene3D G3DSA:1.10.10.10 1 87 1.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_017110 cbccf6bc4b998e1dda6995e00a978be8 480 Gene3D G3DSA:3.90.1150.10 104 473 2.7E-89 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_017110 cbccf6bc4b998e1dda6995e00a978be8 480 SMART SM00345 17 76 1.4E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_017110 cbccf6bc4b998e1dda6995e00a978be8 480 Gene3D G3DSA:3.40.640.10 151 369 2.7E-89 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_017110 cbccf6bc4b998e1dda6995e00a978be8 480 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 1.4E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_017110 cbccf6bc4b998e1dda6995e00a978be8 480 SUPERFAMILY SSF53383 103 474 5.78E-84 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_012740 7c268cceb99b23e807ae5b6e356e430d 219 Pfam PF04012 PspA/IM30 family 2 215 2.0E-43 T 14-10-2018 IPR007157 PspA/IM30 D172_012740 7c268cceb99b23e807ae5b6e356e430d 219 Gene3D G3DSA:1.20.5.170 158 219 4.3E-5 T 14-10-2018 D172_012740 7c268cceb99b23e807ae5b6e356e430d 219 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 217 2.8E-93 T 14-10-2018 IPR014319 Phage shock protein, PspA D172_011505 81172f8fa8f5e4884d5a36490f5d609b 184 Pfam PF14697 4Fe-4S dicluster domain 107 161 1.1E-17 T 14-10-2018 D172_011505 81172f8fa8f5e4884d5a36490f5d609b 184 Pfam PF04060 Putative Fe-S cluster 43 74 9.4E-15 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 D172_011505 81172f8fa8f5e4884d5a36490f5d609b 184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D172_011505 81172f8fa8f5e4884d5a36490f5d609b 184 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 4 182 7.9E-85 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 D172_011505 81172f8fa8f5e4884d5a36490f5d609b 184 Gene3D G3DSA:3.20.20.20 36 103 4.0E-13 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 D172_011505 81172f8fa8f5e4884d5a36490f5d609b 184 Gene3D G3DSA:3.30.70.20 136 178 1.3E-7 T 14-10-2018 D172_011505 81172f8fa8f5e4884d5a36490f5d609b 184 PIRSF PIRSF005784 2 184 4.7E-86 T 14-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 D172_011505 81172f8fa8f5e4884d5a36490f5d609b 184 Gene3D G3DSA:3.30.70.20 104 133 6.0E-6 T 14-10-2018 D172_011505 81172f8fa8f5e4884d5a36490f5d609b 184 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 3 166 25.053 T 14-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 D172_011505 81172f8fa8f5e4884d5a36490f5d609b 184 SUPERFAMILY SSF54862 36 173 7.78E-29 T 14-10-2018 D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 SUPERFAMILY SSF52172 129 266 1.31E-18 T 14-10-2018 IPR011006 CheY-like superfamily D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 Gene3D G3DSA:3.40.50.2300 119 262 1.3E-16 T 14-10-2018 D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 SMART SM00448 129 240 1.3E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 SUPERFAMILY SSF55874 480 646 5.89E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 SUPERFAMILY SSF55785 259 381 2.09E-11 T 14-10-2018 IPR035965 PAS domain superfamily D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 270 389 7.4E-7 T 14-10-2018 IPR000014 PAS domain D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 538 647 6.6E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 Gene3D G3DSA:1.10.287.130 385 489 2.4E-23 T 14-10-2018 D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 SMART SM00091 272 338 1.2E-5 T 14-10-2018 IPR000014 PAS domain D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 SMART SM00388 421 491 8.4E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 SUPERFAMILY SSF47384 407 492 2.75E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 Gene3D G3DSA:3.30.450.20 263 381 1.8E-12 T 14-10-2018 D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 Pfam PF00072 Response regulator receiver domain 131 240 6.0E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 SMART SM00387 537 648 3.6E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 602 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 626 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 632 645 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 PRINTS PR00344 Bacterial sensor protein C-terminal signature 574 588 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 Pfam PF13426 PAS domain 282 381 4.4E-6 T 14-10-2018 IPR000014 PAS domain D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 Gene3D G3DSA:3.30.565.10 498 652 2.3E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_014850 e4f42c08f88d172ce9750aa8e0c9275a 659 Pfam PF00512 His Kinase A (phospho-acceptor) domain 421 489 1.3E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_013120 83a41e28cbd25966b3c5d764962e8297 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 1.2E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_013120 83a41e28cbd25966b3c5d764962e8297 230 SUPERFAMILY SSF46894 125 224 1.41E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_013120 83a41e28cbd25966b3c5d764962e8297 230 Pfam PF00072 Response regulator receiver domain 4 113 2.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_013120 83a41e28cbd25966b3c5d764962e8297 230 Gene3D G3DSA:1.10.10.10 119 230 4.8E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_013120 83a41e28cbd25966b3c5d764962e8297 230 Gene3D G3DSA:3.40.50.2300 1 118 9.0E-33 T 14-10-2018 D172_013120 83a41e28cbd25966b3c5d764962e8297 230 SUPERFAMILY SSF52172 1 126 8.25E-38 T 14-10-2018 IPR011006 CheY-like superfamily D172_013120 83a41e28cbd25966b3c5d764962e8297 230 SMART SM00862 147 223 3.5E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_013120 83a41e28cbd25966b3c5d764962e8297 230 SMART SM00448 2 112 6.5E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004525 dc6446f209d76ec601307ecf141735b2 383 Gene3D G3DSA:3.30.300.10 5 233 7.8E-180 T 14-10-2018 D172_004525 dc6446f209d76ec601307ecf141735b2 383 SUPERFAMILY SSF55973 111 232 2.67E-52 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D172_004525 dc6446f209d76ec601307ecf141735b2 383 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.766 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D172_004525 dc6446f209d76ec601307ecf141735b2 383 SUPERFAMILY SSF55973 3 109 5.1E-48 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D172_004525 dc6446f209d76ec601307ecf141735b2 383 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 2.0E-69 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D172_004525 dc6446f209d76ec601307ecf141735b2 383 PIRSF PIRSF000497 1 382 1.0E-175 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D172_004525 dc6446f209d76ec601307ecf141735b2 383 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D172_004525 dc6446f209d76ec601307ecf141735b2 383 Gene3D G3DSA:3.30.300.10 102 373 7.8E-180 T 14-10-2018 D172_004525 dc6446f209d76ec601307ecf141735b2 383 Gene3D G3DSA:3.30.300.10 11 270 7.8E-180 T 14-10-2018 D172_004525 dc6446f209d76ec601307ecf141735b2 383 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D172_004525 dc6446f209d76ec601307ecf141735b2 383 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 1.5E-43 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D172_004525 dc6446f209d76ec601307ecf141735b2 383 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 5.1E-46 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D172_004525 dc6446f209d76ec601307ecf141735b2 383 SUPERFAMILY SSF55973 233 381 3.02E-71 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D172_004525 dc6446f209d76ec601307ecf141735b2 383 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 5.4E-197 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 D172_019125 70dc999a05c368326556cd5c5eb7444f 342 Pfam PF00107 Zinc-binding dehydrogenase 166 250 5.4E-18 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D172_019125 70dc999a05c368326556cd5c5eb7444f 342 SUPERFAMILY SSF51735 128 289 1.79E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_019125 70dc999a05c368326556cd5c5eb7444f 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 43 104 7.1E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D172_019125 70dc999a05c368326556cd5c5eb7444f 342 Gene3D G3DSA:3.40.50.720 139 277 2.0E-61 T 14-10-2018 D172_019125 70dc999a05c368326556cd5c5eb7444f 342 SUPERFAMILY SSF50129 11 168 9.43E-30 T 14-10-2018 IPR011032 GroES-like superfamily D172_019125 70dc999a05c368326556cd5c5eb7444f 342 Gene3D G3DSA:3.90.180.10 33 336 2.0E-61 T 14-10-2018 D172_019125 70dc999a05c368326556cd5c5eb7444f 342 SMART SM00829 23 338 1.1E-13 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D172_014700 1dcb742ad392deb27b34f83aefd5992e 244 SUPERFAMILY SSF52540 2 223 3.84E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_014700 1dcb742ad392deb27b34f83aefd5992e 244 SMART SM00382 26 209 3.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_014700 1dcb742ad392deb27b34f83aefd5992e 244 Pfam PF00005 ABC transporter 17 160 1.1E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_014700 1dcb742ad392deb27b34f83aefd5992e 244 Gene3D G3DSA:3.40.50.300 1 242 1.7E-66 T 14-10-2018 D172_015785 0bbdabed182101b047f5aba98c60ec71 939 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_015785 0bbdabed182101b047f5aba98c60ec71 939 Gene3D G3DSA:3.40.50.300 6 594 3.9E-246 T 14-10-2018 D172_015785 0bbdabed182101b047f5aba98c60ec71 939 SUPERFAMILY SSF52540 1 569 1.66E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_015785 0bbdabed182101b047f5aba98c60ec71 939 Pfam PF00005 ABC transporter 622 859 3.4E-11 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_015785 0bbdabed182101b047f5aba98c60ec71 939 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.756 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 D172_015785 0bbdabed182101b047f5aba98c60ec71 939 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 924 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 D172_015785 0bbdabed182101b047f5aba98c60ec71 939 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_015785 0bbdabed182101b047f5aba98c60ec71 939 Gene3D G3DSA:3.40.50.300 616 935 9.3E-140 T 14-10-2018 D172_015785 0bbdabed182101b047f5aba98c60ec71 939 Gene3D G3DSA:1.20.1580.10 691 829 9.3E-140 T 14-10-2018 D172_015785 0bbdabed182101b047f5aba98c60ec71 939 Gene3D G3DSA:1.20.1580.10 90 492 3.9E-246 T 14-10-2018 D172_015785 0bbdabed182101b047f5aba98c60ec71 939 Gene3D G3DSA:1.10.8.280 287 403 3.9E-246 T 14-10-2018 D172_015785 0bbdabed182101b047f5aba98c60ec71 939 SUPERFAMILY SSF52540 620 912 7.87E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_015785 0bbdabed182101b047f5aba98c60ec71 939 Gene3D G3DSA:3.30.190.20 130 239 3.9E-246 T 14-10-2018 D172_013405 13564a331d704facb2656d831451ce0a 644 Gene3D G3DSA:3.30.750.140 498 609 5.2E-30 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily D172_013405 13564a331d704facb2656d831451ce0a 644 Pfam PF02120 Flagellar hook-length control protein FliK 516 597 1.1E-23 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal D172_007065 7cc9e5d1d8a577f2f85aab7e6439548e 208 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 196 3.2E-59 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 D172_007065 7cc9e5d1d8a577f2f85aab7e6439548e 208 Gene3D G3DSA:3.40.50.300 1 206 7.2E-64 T 14-10-2018 D172_007065 7cc9e5d1d8a577f2f85aab7e6439548e 208 SUPERFAMILY SSF52540 1 206 2.64E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_007065 7cc9e5d1d8a577f2f85aab7e6439548e 208 Pfam PF02223 Thymidylate kinase 8 196 1.5E-51 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 D172_007065 7cc9e5d1d8a577f2f85aab7e6439548e 208 Hamap MF_00165 Thymidylate kinase [tmk]. 4 204 27.371 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 D172_017080 4beaadb4e7a558e38fb0729131f6c0dd 218 Pfam PF01292 Prokaryotic cytochrome b561 6 173 2.0E-18 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 D172_017080 4beaadb4e7a558e38fb0729131f6c0dd 218 SUPERFAMILY SSF81342 2 178 2.82E-32 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 D172_017080 4beaadb4e7a558e38fb0729131f6c0dd 218 Gene3D G3DSA:1.20.950.20 27 161 3.6E-7 T 14-10-2018 D172_004390 328597a346aa78124b86311c1f8da36a 233 Pfam PF12119 Protein of unknown function (DUF3581) 2 213 4.6E-91 T 14-10-2018 IPR021974 Protein of unknown function DUF3581 D172_019400 638e189d1f414e6e53cc5c6a74761c39 747 SUPERFAMILY SSF49344 38 234 1.29E-41 T 14-10-2018 D172_019400 638e189d1f414e6e53cc5c6a74761c39 747 Gene3D G3DSA:2.60.40.1190 36 220 2.5E-30 T 14-10-2018 D172_019400 638e189d1f414e6e53cc5c6a74761c39 747 Pfam PF06452 Carbohydrate family 9 binding domain-like 45 205 5.9E-10 T 14-10-2018 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_003720 431ef24434618f031db3bbecce518bf6 438 Gene3D G3DSA:1.10.287.470 106 181 7.4E-54 T 14-10-2018 D172_003720 431ef24434618f031db3bbecce518bf6 438 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 384 1.4E-44 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D172_003720 431ef24434618f031db3bbecce518bf6 438 Pfam PF13437 HlyD family secretion protein 184 296 5.1E-9 T 14-10-2018 D172_003720 431ef24434618f031db3bbecce518bf6 438 Gene3D G3DSA:2.40.420.20 318 382 7.4E-54 T 14-10-2018 D172_003720 431ef24434618f031db3bbecce518bf6 438 SUPERFAMILY SSF111369 59 292 3.14E-26 T 14-10-2018 D172_003720 431ef24434618f031db3bbecce518bf6 438 Gene3D G3DSA:2.40.50.100 69 215 7.4E-54 T 14-10-2018 D172_003720 431ef24434618f031db3bbecce518bf6 438 Gene3D G3DSA:2.40.30.170 59 317 7.4E-54 T 14-10-2018 D172_005755 c3073fb60a8074ef078cdab25ac80326 169 Pfam PF00583 Acetyltransferase (GNAT) family 61 144 1.1E-8 T 14-10-2018 IPR000182 GNAT domain D172_005755 c3073fb60a8074ef078cdab25ac80326 169 Gene3D G3DSA:3.40.630.30 4 151 5.6E-18 T 14-10-2018 D172_005755 c3073fb60a8074ef078cdab25ac80326 169 SUPERFAMILY SSF55729 6 153 3.09E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_005915 6cac218d9bada44ff0fe354422919cac 411 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 14 70 3.5E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D172_005915 6cac218d9bada44ff0fe354422919cac 411 SUPERFAMILY SSF47413 13 70 3.49E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D172_005915 6cac218d9bada44ff0fe354422919cac 411 SUPERFAMILY SSF48452 201 324 6.95E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_005915 6cac218d9bada44ff0fe354422919cac 411 Gene3D G3DSA:1.10.260.40 2 73 3.3E-8 T 14-10-2018 D172_005915 6cac218d9bada44ff0fe354422919cac 411 SUPERFAMILY SSF48452 75 232 4.88E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_005915 6cac218d9bada44ff0fe354422919cac 411 SMART SM00028 249 282 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_005915 6cac218d9bada44ff0fe354422919cac 411 SMART SM00028 127 160 2.6 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_005915 6cac218d9bada44ff0fe354422919cac 411 SMART SM00028 289 322 380.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_005915 6cac218d9bada44ff0fe354422919cac 411 Gene3D G3DSA:1.25.40.10 196 410 3.9E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_016120 a45b2ca3e495716d18b59c95d5e8fecb 556 Pfam PF08019 Domain of unknown function (DUF1705) 70 220 4.6E-44 T 14-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 D172_016120 a45b2ca3e495716d18b59c95d5e8fecb 556 Gene3D G3DSA:3.40.720.10 233 554 3.4E-80 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D172_016120 a45b2ca3e495716d18b59c95d5e8fecb 556 Pfam PF00884 Sulfatase 246 532 2.5E-42 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 D172_016120 a45b2ca3e495716d18b59c95d5e8fecb 556 SUPERFAMILY SSF53649 248 544 4.8E-17 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D172_014555 d723ad0add50256160acae2fb78d43ec 750 Gene3D G3DSA:2.40.170.20 170 750 4.9E-112 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_014555 d723ad0add50256160acae2fb78d43ec 750 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 35 750 5.3E-133 T 14-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 D172_014555 d723ad0add50256160acae2fb78d43ec 750 Gene3D G3DSA:2.170.130.10 39 166 2.6E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_014555 d723ad0add50256160acae2fb78d43ec 750 SUPERFAMILY SSF56935 20 750 3.05E-93 T 14-10-2018 D172_014555 d723ad0add50256160acae2fb78d43ec 750 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 152 5.6E-19 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_014555 d723ad0add50256160acae2fb78d43ec 750 Pfam PF00593 TonB dependent receptor 267 749 2.9E-40 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_009730 3e7a631bc756a05fd0e1e5be1a9085cf 612 Pfam PF13721 SecD export protein N-terminal TM region 19 107 1.2E-8 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain D172_009730 3e7a631bc756a05fd0e1e5be1a9085cf 612 Gene3D G3DSA:1.20.1640.10 423 610 3.8E-14 T 14-10-2018 D172_009730 3e7a631bc756a05fd0e1e5be1a9085cf 612 Gene3D G3DSA:3.30.1360.200 298 422 9.4E-18 T 14-10-2018 D172_009730 3e7a631bc756a05fd0e1e5be1a9085cf 612 Gene3D G3DSA:3.30.70.3400 219 297 6.7E-16 T 14-10-2018 D172_009730 3e7a631bc756a05fd0e1e5be1a9085cf 612 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 132 594 1.2E-115 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 D172_009730 3e7a631bc756a05fd0e1e5be1a9085cf 612 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 12 609 39.718 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 D172_009730 3e7a631bc756a05fd0e1e5be1a9085cf 612 Pfam PF02355 Protein export membrane protein 427 597 8.1E-19 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial D172_009730 3e7a631bc756a05fd0e1e5be1a9085cf 612 SUPERFAMILY SSF82866 404 596 3.79E-41 T 14-10-2018 D172_009730 3e7a631bc756a05fd0e1e5be1a9085cf 612 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 587 3.4E-69 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D172_006790 69a0ed774eddc99b6995e1ec76eef81b 353 Pfam PF09423 PhoD-like phosphatase 76 292 1.6E-17 T 14-10-2018 IPR018946 Alkaline phosphatase D-related D172_006790 69a0ed774eddc99b6995e1ec76eef81b 353 Gene3D G3DSA:3.60.21.70 27 330 3.7E-36 T 14-10-2018 IPR038607 PhoD-like superfamily D172_006790 69a0ed774eddc99b6995e1ec76eef81b 353 SUPERFAMILY SSF56300 29 290 2.3E-29 T 14-10-2018 D172_009685 106cfa6a0feafbff4f47b4b4dda159d1 464 Pfam PF07478 D-ala D-ala ligase C-terminus 282 431 9.8E-11 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_009685 106cfa6a0feafbff4f47b4b4dda159d1 464 SUPERFAMILY SSF56059 249 452 2.6E-40 T 14-10-2018 D172_009685 106cfa6a0feafbff4f47b4b4dda159d1 464 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 26 127 1.1E-24 T 14-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain D172_009685 106cfa6a0feafbff4f47b4b4dda159d1 464 Gene3D G3DSA:3.30.1490.20 272 340 2.1E-9 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D172_009685 106cfa6a0feafbff4f47b4b4dda159d1 464 Gene3D G3DSA:3.40.50.20 186 271 3.8E-5 T 14-10-2018 D172_009685 106cfa6a0feafbff4f47b4b4dda159d1 464 Gene3D G3DSA:3.30.470.20 341 456 9.1E-20 T 14-10-2018 D172_000635 a5d463b0c88e2a74ac9f699091706866 118 TIGRFAM TIGR00526 folB_dom: FolB domain 5 117 6.5E-27 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 D172_000635 a5d463b0c88e2a74ac9f699091706866 118 Gene3D G3DSA:3.30.1130.10 1 118 1.0E-40 T 14-10-2018 D172_000635 a5d463b0c88e2a74ac9f699091706866 118 SMART SM00905 6 116 1.9E-33 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 D172_000635 a5d463b0c88e2a74ac9f699091706866 118 Pfam PF02152 Dihydroneopterin aldolase 6 114 1.5E-27 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 D172_000635 a5d463b0c88e2a74ac9f699091706866 118 SUPERFAMILY SSF55620 4 114 7.23E-29 T 14-10-2018 D172_014140 b75438e1129302392aacea69abffcb5b 105 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 1 104 28.742 T 14-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 D172_014140 b75438e1129302392aacea69abffcb5b 105 Pfam PF00581 Rhodanese-like domain 11 97 1.4E-14 T 14-10-2018 IPR001763 Rhodanese-like domain D172_014140 b75438e1129302392aacea69abffcb5b 105 Gene3D G3DSA:3.40.250.10 1 104 6.1E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily D172_014140 b75438e1129302392aacea69abffcb5b 105 SUPERFAMILY SSF52821 3 103 2.1E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily D172_014140 b75438e1129302392aacea69abffcb5b 105 SMART SM00450 6 101 9.4E-20 T 14-10-2018 IPR001763 Rhodanese-like domain D172_005130 ca3b0e373be3b2428324bd5857c0b345 348 SUPERFAMILY SSF51735 148 311 5.68E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_005130 ca3b0e373be3b2428324bd5857c0b345 348 Pfam PF00107 Zinc-binding dehydrogenase 185 305 1.2E-19 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D172_005130 ca3b0e373be3b2428324bd5857c0b345 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 143 7.7E-27 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D172_005130 ca3b0e373be3b2428324bd5857c0b345 348 Gene3D G3DSA:3.40.50.720 166 320 1.0E-134 T 14-10-2018 D172_005130 ca3b0e373be3b2428324bd5857c0b345 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 D172_005130 ca3b0e373be3b2428324bd5857c0b345 348 SUPERFAMILY SSF50129 12 174 6.24E-49 T 14-10-2018 IPR011032 GroES-like superfamily D172_005130 ca3b0e373be3b2428324bd5857c0b345 348 Gene3D G3DSA:3.90.180.10 8 340 1.0E-134 T 14-10-2018 D172_005130 ca3b0e373be3b2428324bd5857c0b345 348 SMART SM00829 12 341 0.0016 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D172_013240 284bba633e67b833a61faf964401d588 417 SMART SM00028 168 201 1.3E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_013240 284bba633e67b833a61faf964401d588 417 SMART SM00028 239 272 330.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_013240 284bba633e67b833a61faf964401d588 417 SUPERFAMILY SSF48452 167 278 1.83E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_013240 284bba633e67b833a61faf964401d588 417 Gene3D G3DSA:1.25.40.10 155 295 2.5E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_013240 284bba633e67b833a61faf964401d588 417 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 4 118 1.1E-23 T 14-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI D172_013240 284bba633e67b833a61faf964401d588 417 Pfam PF13181 Tetratricopeptide repeat 170 201 1.6E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_020490 19356a05172c14e23d8e7ac4316bcbc5 1216 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1115 1175 1.2E-11 T 14-10-2018 D172_020490 19356a05172c14e23d8e7ac4316bcbc5 1216 SUPERFAMILY SSF52540 1 1204 2.92E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_020490 19356a05172c14e23d8e7ac4316bcbc5 1216 Gene3D G3DSA:3.40.50.300 934 1216 7.3E-26 T 14-10-2018 D172_020490 19356a05172c14e23d8e7ac4316bcbc5 1216 Gene3D G3DSA:3.40.50.300 1 333 5.6E-42 T 14-10-2018 D172_020490 19356a05172c14e23d8e7ac4316bcbc5 1216 Pfam PF13476 AAA domain 6 279 4.2E-16 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain D172_002215 b806bf68dc78aba6727a0bcd5cf9d3aa 418 SUPERFAMILY SSF50156 103 188 1.39E-15 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 D172_002215 b806bf68dc78aba6727a0bcd5cf9d3aa 418 Gene3D G3DSA:3.30.750.44 76 349 9.4E-80 T 14-10-2018 D172_002215 b806bf68dc78aba6727a0bcd5cf9d3aa 418 SUPERFAMILY SSF52096 47 378 1.04E-66 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_002215 b806bf68dc78aba6727a0bcd5cf9d3aa 418 SMART SM00245 181 374 2.5E-60 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D172_002215 b806bf68dc78aba6727a0bcd5cf9d3aa 418 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 78 382 3.7E-91 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 D172_002215 b806bf68dc78aba6727a0bcd5cf9d3aa 418 SMART SM00228 108 179 7.5E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 D172_002215 b806bf68dc78aba6727a0bcd5cf9d3aa 418 Pfam PF03572 Peptidase family S41 207 372 3.7E-50 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D172_002215 b806bf68dc78aba6727a0bcd5cf9d3aa 418 Gene3D G3DSA:2.30.42.10 108 195 9.4E-80 T 14-10-2018 D172_002215 b806bf68dc78aba6727a0bcd5cf9d3aa 418 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 108 176 1.2E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 D172_002215 b806bf68dc78aba6727a0bcd5cf9d3aa 418 Gene3D G3DSA:3.90.226.10 196 371 9.4E-80 T 14-10-2018 D172_016335 74a1f42926d8346760d8d54272cb1a66 131 Pfam PF08818 Domain of unknown function (DU1801) 18 117 1.7E-9 T 14-10-2018 IPR014922 Domain of unknown function DUF1801 D172_016335 74a1f42926d8346760d8d54272cb1a66 131 SUPERFAMILY SSF159888 4 122 2.49E-12 T 14-10-2018 D172_007175 fb829e1586304b4dee02461d5bae0476 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.0E-16 T 14-10-2018 D172_007175 fb829e1586304b4dee02461d5bae0476 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 1.0E-16 T 14-10-2018 D172_007175 fb829e1586304b4dee02461d5bae0476 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.0E-16 T 14-10-2018 D172_007175 fb829e1586304b4dee02461d5bae0476 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.0E-16 T 14-10-2018 D172_007175 fb829e1586304b4dee02461d5bae0476 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.0E-16 T 14-10-2018 D172_007175 fb829e1586304b4dee02461d5bae0476 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 3.1E-8 T 14-10-2018 D172_007175 fb829e1586304b4dee02461d5bae0476 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 3.1E-8 T 14-10-2018 D172_007175 fb829e1586304b4dee02461d5bae0476 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 3.1E-8 T 14-10-2018 D172_007175 fb829e1586304b4dee02461d5bae0476 507 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.1E-8 T 14-10-2018 D172_007175 fb829e1586304b4dee02461d5bae0476 507 Pfam PF04324 BFD-like [2Fe-2S] binding domain 436 484 4.4E-11 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain D172_007175 fb829e1586304b4dee02461d5bae0476 507 SUPERFAMILY SSF51905 151 311 6.79E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_007175 fb829e1586304b4dee02461d5bae0476 507 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 284 2.6E-49 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D172_007175 fb829e1586304b4dee02461d5bae0476 507 Gene3D G3DSA:3.50.50.60 8 284 9.0E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_007175 fb829e1586304b4dee02461d5bae0476 507 SUPERFAMILY SSF51905 3 189 1.94E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_007175 fb829e1586304b4dee02461d5bae0476 507 Gene3D G3DSA:1.10.10.1100 435 490 3.7E-12 T 14-10-2018 D172_007175 fb829e1586304b4dee02461d5bae0476 507 Gene3D G3DSA:3.50.50.60 112 247 9.0E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_005395 66534d6228e35640342b892d8cf49750 518 SUPERFAMILY SSF52540 208 447 9.74E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_005395 66534d6228e35640342b892d8cf49750 518 Pfam PF00989 PAS fold 82 130 7.3E-9 T 14-10-2018 IPR013767 PAS fold GO:0006355 D172_005395 66534d6228e35640342b892d8cf49750 518 SMART SM00091 81 147 2.7E-6 T 14-10-2018 IPR000014 PAS domain D172_005395 66534d6228e35640342b892d8cf49750 518 Pfam PF00158 Sigma-54 interaction domain 211 371 1.2E-57 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D172_005395 66534d6228e35640342b892d8cf49750 518 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 418 427 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site D172_005395 66534d6228e35640342b892d8cf49750 518 Gene3D G3DSA:1.10.10.60 457 513 9.2E-27 T 14-10-2018 D172_005395 66534d6228e35640342b892d8cf49750 518 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 512 4.9E-28 T 14-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 D172_005395 66534d6228e35640342b892d8cf49750 518 SMART SM00382 227 372 2.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_005395 66534d6228e35640342b892d8cf49750 518 Gene3D G3DSA:3.30.450.20 83 191 1.5E-28 T 14-10-2018 D172_005395 66534d6228e35640342b892d8cf49750 518 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 231 244 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 D172_005395 66534d6228e35640342b892d8cf49750 518 Gene3D G3DSA:3.40.50.300 197 376 3.4E-56 T 14-10-2018 D172_005395 66534d6228e35640342b892d8cf49750 518 SUPERFAMILY SSF55785 81 168 6.28E-11 T 14-10-2018 IPR035965 PAS domain superfamily D172_005395 66534d6228e35640342b892d8cf49750 518 Gene3D G3DSA:1.10.8.60 378 454 2.6E-23 T 14-10-2018 D172_005395 66534d6228e35640342b892d8cf49750 518 SUPERFAMILY SSF46689 459 512 5.61E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_005395 66534d6228e35640342b892d8cf49750 518 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 291 306 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D172_005395 66534d6228e35640342b892d8cf49750 518 Gene3D G3DSA:3.30.70.260 1 82 2.0E-26 T 14-10-2018 D172_017475 728bb25253a7b10ca1ef806456849d48 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 3.1E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_017475 728bb25253a7b10ca1ef806456849d48 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 3.1E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_017475 728bb25253a7b10ca1ef806456849d48 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 3.1E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_017475 728bb25253a7b10ca1ef806456849d48 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 3.1E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_017475 728bb25253a7b10ca1ef806456849d48 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 3.1E-30 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_017475 728bb25253a7b10ca1ef806456849d48 336 Gene3D G3DSA:3.30.360.10 151 315 4.8E-125 T 14-10-2018 D172_017475 728bb25253a7b10ca1ef806456849d48 336 PIRSF PIRSF000149 1 334 2.3E-118 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_017475 728bb25253a7b10ca1ef806456849d48 336 SMART SM00846 3 152 1.4E-64 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_017475 728bb25253a7b10ca1ef806456849d48 336 Gene3D G3DSA:3.40.50.720 4 327 4.8E-125 T 14-10-2018 D172_017475 728bb25253a7b10ca1ef806456849d48 336 SUPERFAMILY SSF55347 152 314 1.22E-64 T 14-10-2018 D172_017475 728bb25253a7b10ca1ef806456849d48 336 SUPERFAMILY SSF51735 1 180 1.08E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_017475 728bb25253a7b10ca1ef806456849d48 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 2.1E-60 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_017475 728bb25253a7b10ca1ef806456849d48 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 1.5E-28 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_017475 728bb25253a7b10ca1ef806456849d48 336 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_017475 728bb25253a7b10ca1ef806456849d48 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 9.7E-117 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_011220 5142af8bcdefa622e3ec95f9a06cdf66 159 SUPERFAMILY SSF103642 138 158 4.19E-7 T 14-10-2018 D172_011220 5142af8bcdefa622e3ec95f9a06cdf66 159 Pfam PF02810 SEC-C motif 141 157 2.5E-7 T 14-10-2018 IPR004027 SEC-C motif D172_011220 5142af8bcdefa622e3ec95f9a06cdf66 159 SUPERFAMILY SSF54427 30 131 1.05E-29 T 14-10-2018 IPR032710 NTF2-like domain superfamily D172_011220 5142af8bcdefa622e3ec95f9a06cdf66 159 Gene3D G3DSA:3.10.450.50 1 159 6.3E-50 T 14-10-2018 D172_018600 05fddc7cd91b01b3548bb05b13482328 488 SUPERFAMILY SSF58104 196 488 2.09E-51 T 14-10-2018 D172_018600 05fddc7cd91b01b3548bb05b13482328 488 Gene3D G3DSA:1.10.287.950 199 488 1.0E-51 T 14-10-2018 D172_018600 05fddc7cd91b01b3548bb05b13482328 488 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 325 352 1.1E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_018600 05fddc7cd91b01b3548bb05b13482328 488 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 354 383 1.1E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_018600 05fddc7cd91b01b3548bb05b13482328 488 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 26 1.1E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_018600 05fddc7cd91b01b3548bb05b13482328 488 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 298 454 6.1E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_018600 05fddc7cd91b01b3548bb05b13482328 488 SMART SM00283 227 488 2.2E-29 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_014225 039bca820eaa9557eb3f10da45ab39c2 500 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 258 1.1E-30 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D172_014225 039bca820eaa9557eb3f10da45ab39c2 500 Gene3D G3DSA:3.40.190.10 121 215 7.6E-65 T 14-10-2018 D172_014225 039bca820eaa9557eb3f10da45ab39c2 500 Gene3D G3DSA:3.40.190.10 30 254 7.6E-65 T 14-10-2018 D172_014225 039bca820eaa9557eb3f10da45ab39c2 500 Gene3D G3DSA:1.10.530.10 275 455 7.7E-33 T 14-10-2018 D172_014225 039bca820eaa9557eb3f10da45ab39c2 500 SMART SM00062 36 259 6.2E-25 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D172_014225 039bca820eaa9557eb3f10da45ab39c2 500 SUPERFAMILY SSF53955 238 398 1.27E-33 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily D172_014225 039bca820eaa9557eb3f10da45ab39c2 500 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 3 461 48.242 T 14-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 D172_014225 039bca820eaa9557eb3f10da45ab39c2 500 Pfam PF01464 Transglycosylase SLT domain 288 385 2.4E-22 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 D172_014225 039bca820eaa9557eb3f10da45ab39c2 500 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 300 328 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 D172_014225 039bca820eaa9557eb3f10da45ab39c2 500 SUPERFAMILY SSF53850 37 258 1.81E-36 T 14-10-2018 D172_016115 a2549f2c73b6c7d0de8686e6bc3336d3 549 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 189 321 4.2E-40 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 D172_016115 a2549f2c73b6c7d0de8686e6bc3336d3 549 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 1.1E-58 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 D172_016115 a2549f2c73b6c7d0de8686e6bc3336d3 549 Gene3D G3DSA:3.40.50.1220 179 347 6.4E-47 T 14-10-2018 D172_016115 a2549f2c73b6c7d0de8686e6bc3336d3 549 SUPERFAMILY SSF52518 356 547 9.95E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_016115 a2549f2c73b6c7d0de8686e6bc3336d3 549 Gene3D G3DSA:3.40.50.970 348 549 2.0E-65 T 14-10-2018 D172_016115 a2549f2c73b6c7d0de8686e6bc3336d3 549 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 521 4.2E-48 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 D172_016115 a2549f2c73b6c7d0de8686e6bc3336d3 549 SUPERFAMILY SSF52518 1 173 4.96E-62 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_016115 a2549f2c73b6c7d0de8686e6bc3336d3 549 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 D172_016115 a2549f2c73b6c7d0de8686e6bc3336d3 549 SUPERFAMILY SSF52467 179 338 1.9E-50 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily D172_016115 a2549f2c73b6c7d0de8686e6bc3336d3 549 Gene3D G3DSA:3.40.50.970 1 178 7.8E-70 T 14-10-2018 D172_016115 a2549f2c73b6c7d0de8686e6bc3336d3 549 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 2.6E-204 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 D172_000165 294727e340136b42d92d3a0464635d2b 364 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 343 3.0E-23 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal D172_000165 294727e340136b42d92d3a0464635d2b 364 Gene3D G3DSA:3.40.50.300 6 334 6.1E-83 T 14-10-2018 D172_000165 294727e340136b42d92d3a0464635d2b 364 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 360 7.8E-99 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 D172_000165 294727e340136b42d92d3a0464635d2b 364 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 364 84.307 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 D172_000165 294727e340136b42d92d3a0464635d2b 364 Gene3D G3DSA:1.20.1050.90 120 300 6.1E-83 T 14-10-2018 D172_000165 294727e340136b42d92d3a0464635d2b 364 SUPERFAMILY SSF52540 1 341 3.82E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_000165 294727e340136b42d92d3a0464635d2b 364 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 D172_008055 cc8dbdff98ff0e52ebb3eb7c7db92a91 615 SMART SM00382 392 583 4.1E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_008055 cc8dbdff98ff0e52ebb3eb7c7db92a91 615 Gene3D G3DSA:1.20.1560.10 5 344 1.3E-25 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D172_008055 cc8dbdff98ff0e52ebb3eb7c7db92a91 615 Gene3D G3DSA:3.40.50.300 351 610 2.5E-90 T 14-10-2018 D172_008055 cc8dbdff98ff0e52ebb3eb7c7db92a91 615 SUPERFAMILY SSF90123 29 349 1.83E-49 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D172_008055 cc8dbdff98ff0e52ebb3eb7c7db92a91 615 Pfam PF00005 ABC transporter 384 537 1.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_008055 cc8dbdff98ff0e52ebb3eb7c7db92a91 615 ProSitePatterns PS00211 ABC transporters family signature. 509 523 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_008055 cc8dbdff98ff0e52ebb3eb7c7db92a91 615 SUPERFAMILY SSF52540 352 607 5.94E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_008055 cc8dbdff98ff0e52ebb3eb7c7db92a91 615 Pfam PF00664 ABC transporter transmembrane region 43 309 4.4E-19 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D172_011010 b4356784f1f685540cd9bb4481dd9596 334 Gene3D G3DSA:3.40.1550.10 140 329 2.8E-38 T 14-10-2018 IPR028976 CheC-like superfamily D172_011010 b4356784f1f685540cd9bb4481dd9596 334 SUPERFAMILY SSF103039 137 328 6.37E-47 T 14-10-2018 IPR028976 CheC-like superfamily D172_011010 b4356784f1f685540cd9bb4481dd9596 334 Gene3D G3DSA:3.40.50.2300 2 139 1.4E-27 T 14-10-2018 D172_011010 b4356784f1f685540cd9bb4481dd9596 334 Pfam PF00072 Response regulator receiver domain 5 115 4.1E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_011010 b4356784f1f685540cd9bb4481dd9596 334 SUPERFAMILY SSF52172 4 119 3.56E-29 T 14-10-2018 IPR011006 CheY-like superfamily D172_011010 b4356784f1f685540cd9bb4481dd9596 334 SMART SM00448 3 115 1.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_012750 a5f60e32831e0778cf6cc083f06ef1a8 535 Gene3D G3DSA:3.40.190.10 214 523 7.1E-191 T 14-10-2018 D172_012750 a5f60e32831e0778cf6cc083f06ef1a8 535 Gene3D G3DSA:3.10.105.10 293 511 7.1E-191 T 14-10-2018 D172_012750 a5f60e32831e0778cf6cc083f06ef1a8 535 Gene3D G3DSA:3.90.76.10 41 213 7.1E-191 T 14-10-2018 D172_012750 a5f60e32831e0778cf6cc083f06ef1a8 535 SUPERFAMILY SSF53850 31 533 4.89E-138 T 14-10-2018 D172_012750 a5f60e32831e0778cf6cc083f06ef1a8 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site D172_012750 a5f60e32831e0778cf6cc083f06ef1a8 535 PIRSF PIRSF002741 1 534 1.4E-109 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 D172_012750 a5f60e32831e0778cf6cc083f06ef1a8 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 452 1.7E-93 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain D172_001235 4732a1e8a659d7e7b42b8c182f9ec5d1 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 5.0E-13 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_001235 4732a1e8a659d7e7b42b8c182f9ec5d1 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 5.0E-13 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_001235 4732a1e8a659d7e7b42b8c182f9ec5d1 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 5.0E-13 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_001235 4732a1e8a659d7e7b42b8c182f9ec5d1 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 5.0E-13 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_001235 4732a1e8a659d7e7b42b8c182f9ec5d1 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 44 61 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_001235 4732a1e8a659d7e7b42b8c182f9ec5d1 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 168 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 D172_001235 4732a1e8a659d7e7b42b8c182f9ec5d1 294 SUPERFAMILY SSF51569 12 286 7.85E-59 T 14-10-2018 D172_001235 4732a1e8a659d7e7b42b8c182f9ec5d1 294 PIRSF PIRSF001365 10 290 1.3E-53 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_001235 4732a1e8a659d7e7b42b8c182f9ec5d1 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 8 289 39.517 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_001235 4732a1e8a659d7e7b42b8c182f9ec5d1 294 Gene3D G3DSA:3.20.20.70 5 292 3.1E-66 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_001235 4732a1e8a659d7e7b42b8c182f9ec5d1 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 12 283 5.3E-77 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 D172_001235 4732a1e8a659d7e7b42b8c182f9ec5d1 294 SMART SM01130 9 291 2.3E-59 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_001235 4732a1e8a659d7e7b42b8c182f9ec5d1 294 Pfam PF00701 Dihydrodipicolinate synthetase family 12 279 1.5E-50 T 14-10-2018 IPR002220 DapA-like GO:0016829 D172_006055 ad1ea271255eba180286cdbf594c6918 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 140.752 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 D172_006055 ad1ea271255eba180286cdbf594c6918 281 Gene3D G3DSA:3.30.1130.10 21 139 2.3E-44 T 14-10-2018 D172_006055 ad1ea271255eba180286cdbf594c6918 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 1.3E-47 T 14-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 D172_006055 ad1ea271255eba180286cdbf594c6918 281 SUPERFAMILY SSF55620 184 268 2.89E-8 T 14-10-2018 D172_006055 ad1ea271255eba180286cdbf594c6918 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 2.2E-128 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 D172_006055 ad1ea271255eba180286cdbf594c6918 281 Gene3D G3DSA:3.30.1130.10 144 281 2.6E-56 T 14-10-2018 D172_006055 ad1ea271255eba180286cdbf594c6918 281 Pfam PF14489 QueF-like protein 194 269 9.8E-26 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 D172_006055 ad1ea271255eba180286cdbf594c6918 281 PIRSF PIRSF004750 6 281 3.4E-119 T 14-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 D172_011800 478985f7443c44df754c143e20b1e5e9 255 SUPERFAMILY SSF64383 121 253 2.35E-41 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 D172_011800 478985f7443c44df754c143e20b1e5e9 255 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 123 249 2.2E-40 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 D172_011800 478985f7443c44df754c143e20b1e5e9 255 Gene3D G3DSA:3.30.1400.10 119 255 3.9E-42 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 D172_011800 478985f7443c44df754c143e20b1e5e9 255 SMART SM00771 120 250 5.3E-40 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 D172_011800 478985f7443c44df754c143e20b1e5e9 255 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 114 250 3.6E-36 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 D172_011800 478985f7443c44df754c143e20b1e5e9 255 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 252 20.724 T 14-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 D172_011800 478985f7443c44df754c143e20b1e5e9 255 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 124 239 6.0E-62 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 D172_005355 a2055e19babee1cedcd947db016829fc 1272 Gene3D G3DSA:1.25.40.10 703 885 1.0E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_005355 a2055e19babee1cedcd947db016829fc 1272 SMART SM00028 503 536 25.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_005355 a2055e19babee1cedcd947db016829fc 1272 SMART SM00028 756 789 32.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_005355 a2055e19babee1cedcd947db016829fc 1272 SMART SM00028 614 647 240.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_005355 a2055e19babee1cedcd947db016829fc 1272 SMART SM00028 276 309 400.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_005355 a2055e19babee1cedcd947db016829fc 1272 SMART SM00028 469 502 0.18 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_005355 a2055e19babee1cedcd947db016829fc 1272 SMART SM00028 392 425 0.014 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_005355 a2055e19babee1cedcd947db016829fc 1272 SMART SM00028 310 343 4.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_005355 a2055e19babee1cedcd947db016829fc 1272 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 918 1253 2.1E-109 T 14-10-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 D172_005355 a2055e19babee1cedcd947db016829fc 1272 SUPERFAMILY SSF48452 276 560 4.17E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_005355 a2055e19babee1cedcd947db016829fc 1272 Gene3D G3DSA:1.25.40.10 266 468 7.3E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_005355 a2055e19babee1cedcd947db016829fc 1272 Gene3D G3DSA:1.25.40.10 21 229 1.7E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_005355 a2055e19babee1cedcd947db016829fc 1272 Pfam PF13432 Tetratricopeptide repeat 396 441 1.6E-5 T 14-10-2018 D172_005355 a2055e19babee1cedcd947db016829fc 1272 SUPERFAMILY SSF48452 472 784 1.22E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_005355 a2055e19babee1cedcd947db016829fc 1272 Pfam PF14559 Tetratricopeptide repeat 479 540 1.4E-7 T 14-10-2018 D172_005355 a2055e19babee1cedcd947db016829fc 1272 Gene3D G3DSA:1.25.40.10 469 682 1.5E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_005355 a2055e19babee1cedcd947db016829fc 1272 PRINTS PR01441 Cellulose synthase subunit C signature 415 435 4.5E-8 T 14-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 D172_005355 a2055e19babee1cedcd947db016829fc 1272 PRINTS PR01441 Cellulose synthase subunit C signature 757 785 4.5E-8 T 14-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 D172_005355 a2055e19babee1cedcd947db016829fc 1272 PRINTS PR01441 Cellulose synthase subunit C signature 1117 1141 4.5E-8 T 14-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 D172_019700 2100225d0e993e37d53c27b137a95911 447 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 1.1E-44 T 14-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 D172_019700 2100225d0e993e37d53c27b137a95911 447 Pfam PF03641 Possible lysine decarboxylase 183 318 2.7E-30 T 14-10-2018 IPR031100 LOG family D172_019700 2100225d0e993e37d53c27b137a95911 447 Gene3D G3DSA:3.30.1850.10 1 116 7.2E-49 T 14-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 D172_019700 2100225d0e993e37d53c27b137a95911 447 Gene3D G3DSA:3.40.50.450 117 445 9.9E-119 T 14-10-2018 D172_019700 2100225d0e993e37d53c27b137a95911 447 SUPERFAMILY SSF102405 114 322 4.43E-38 T 14-10-2018 D172_019700 2100225d0e993e37d53c27b137a95911 447 Pfam PF11892 Domain of unknown function (DUF3412) 326 445 2.3E-57 T 14-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 D172_018490 9a1f7549857b05bce602ab0978b2b067 246 Gene3D G3DSA:1.20.120.530 82 226 1.4E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_018490 9a1f7549857b05bce602ab0978b2b067 246 SMART SM00345 10 69 1.1E-23 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_018490 9a1f7549857b05bce602ab0978b2b067 246 SUPERFAMILY SSF48008 84 216 4.45E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_018490 9a1f7549857b05bce602ab0978b2b067 246 Pfam PF07729 FCD domain 86 207 1.3E-21 T 14-10-2018 IPR011711 GntR, C-terminal D172_018490 9a1f7549857b05bce602ab0978b2b067 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_018490 9a1f7549857b05bce602ab0978b2b067 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_018490 9a1f7549857b05bce602ab0978b2b067 246 SUPERFAMILY SSF46785 3 72 9.79E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_018490 9a1f7549857b05bce602ab0978b2b067 246 Gene3D G3DSA:1.10.10.10 2 74 5.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_018490 9a1f7549857b05bce602ab0978b2b067 246 SMART SM00895 86 208 9.1E-20 T 14-10-2018 IPR011711 GntR, C-terminal D172_018490 9a1f7549857b05bce602ab0978b2b067 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 8.7E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_016280 2ef65fa26327b36aad48d0449de487c6 66 SUPERFAMILY SSF47413 2 63 8.58E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D172_016280 2ef65fa26327b36aad48d0449de487c6 66 Pfam PF01381 Helix-turn-helix 5 57 7.0E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D172_016280 2ef65fa26327b36aad48d0449de487c6 66 Gene3D G3DSA:1.10.260.40 1 64 3.8E-22 T 14-10-2018 D172_016280 2ef65fa26327b36aad48d0449de487c6 66 SMART SM00530 4 59 4.2E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D172_016775 6da3c52060d1ef513347d578e285045f 398 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 34 390 1.2E-98 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 D172_016775 6da3c52060d1ef513347d578e285045f 398 SUPERFAMILY SSF51556 28 396 1.5E-99 T 14-10-2018 IPR032466 Metal-dependent hydrolase D172_016775 6da3c52060d1ef513347d578e285045f 398 Gene3D G3DSA:3.20.20.140 26 398 1.9E-121 T 14-10-2018 D172_006800 cffb365028eaeb09aa87c68f81ee39de 1187 SUPERFAMILY SSF52540 13 821 9.91E-102 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006800 cffb365028eaeb09aa87c68f81ee39de 1187 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1048 1156 4.5E-5 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type D172_006800 cffb365028eaeb09aa87c68f81ee39de 1187 Gene3D G3DSA:1.10.3170.10 151 349 1.8E-133 T 14-10-2018 D172_006800 cffb365028eaeb09aa87c68f81ee39de 1187 SUPERFAMILY SSF52980 905 1182 1.88E-73 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 D172_006800 cffb365028eaeb09aa87c68f81ee39de 1187 Pfam PF13361 UvrD-like helicase C-terminal domain 443 810 6.4E-16 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 D172_006800 cffb365028eaeb09aa87c68f81ee39de 1187 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 2 1182 21.253 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 D172_006800 cffb365028eaeb09aa87c68f81ee39de 1187 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 4 1174 1.1E-294 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 D172_006800 cffb365028eaeb09aa87c68f81ee39de 1187 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 435 2.5E-56 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 D172_006800 cffb365028eaeb09aa87c68f81ee39de 1187 Gene3D G3DSA:3.90.320.10 896 1185 4.5E-87 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal D172_006800 cffb365028eaeb09aa87c68f81ee39de 1187 Gene3D G3DSA:3.40.50.300 446 842 9.6E-133 T 14-10-2018 D172_006800 cffb365028eaeb09aa87c68f81ee39de 1187 Gene3D G3DSA:1.10.486.10 588 731 9.6E-133 T 14-10-2018 D172_006800 cffb365028eaeb09aa87c68f81ee39de 1187 Gene3D G3DSA:3.40.50.300 4 435 1.8E-133 T 14-10-2018 D172_002995 7bf4f17f3e876ba5baff3e5c7f9268a9 511 SUPERFAMILY SSF55681 151 507 9.19E-115 T 14-10-2018 D172_002995 7bf4f17f3e876ba5baff3e5c7f9268a9 511 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 14 509 42.975 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D172_002995 7bf4f17f3e876ba5baff3e5c7f9268a9 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 233 246 1.9E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D172_002995 7bf4f17f3e876ba5baff3e5c7f9268a9 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 1.9E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D172_002995 7bf4f17f3e876ba5baff3e5c7f9268a9 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 220 1.9E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D172_002995 7bf4f17f3e876ba5baff3e5c7f9268a9 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 188 198 1.9E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D172_002995 7bf4f17f3e876ba5baff3e5c7f9268a9 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 251 268 1.9E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D172_002995 7bf4f17f3e876ba5baff3e5c7f9268a9 511 Pfam PF00152 tRNA synthetases class II (D, K and N) 151 506 3.4E-83 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_002995 7bf4f17f3e876ba5baff3e5c7f9268a9 511 Gene3D G3DSA:2.40.50.140 3 143 6.8E-29 T 14-10-2018 D172_002995 7bf4f17f3e876ba5baff3e5c7f9268a9 511 Pfam PF01336 OB-fold nucleic acid binding domain 63 134 9.5E-10 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 D172_002995 7bf4f17f3e876ba5baff3e5c7f9268a9 511 Gene3D G3DSA:3.30.930.10 147 511 2.1E-130 T 14-10-2018 D172_002995 7bf4f17f3e876ba5baff3e5c7f9268a9 511 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 9 509 1.4E-199 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 D172_002995 7bf4f17f3e876ba5baff3e5c7f9268a9 511 SUPERFAMILY SSF50249 6 144 5.36E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_005590 d470d2fcf7c40fb5d9a473b040e106d7 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 29 227 6.7E-66 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 D172_005590 d470d2fcf7c40fb5d9a473b040e106d7 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 7 239 1.5E-104 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 D172_005590 d470d2fcf7c40fb5d9a473b040e106d7 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 115.523 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 D172_005590 d470d2fcf7c40fb5d9a473b040e106d7 255 Gene3D G3DSA:3.40.1280.10 5 171 5.0E-68 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D172_005590 d470d2fcf7c40fb5d9a473b040e106d7 255 SUPERFAMILY SSF75217 7 251 7.19E-102 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases D172_005590 d470d2fcf7c40fb5d9a473b040e106d7 255 PIRSF PIRSF000386 7 255 2.7E-101 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 D172_005590 d470d2fcf7c40fb5d9a473b040e106d7 255 Gene3D G3DSA:1.10.1270.20 172 254 2.5E-34 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 D172_001920 64c087e824d97ece22fd83c81648bebd 516 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 109 317 2.8E-82 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D172_001920 64c087e824d97ece22fd83c81648bebd 516 SUPERFAMILY SSF111369 125 322 7.06E-21 T 14-10-2018 D172_001920 64c087e824d97ece22fd83c81648bebd 516 Gene3D G3DSA:1.10.287.470 182 194 2.5E-30 T 14-10-2018 D172_001920 64c087e824d97ece22fd83c81648bebd 516 Pfam PF11604 Copper binding periplasmic protein CusF 433 498 5.3E-15 T 14-10-2018 IPR021647 Copper binding periplasmic protein CusF D172_001920 64c087e824d97ece22fd83c81648bebd 516 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 201 389 3.3E-38 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D172_001920 64c087e824d97ece22fd83c81648bebd 516 Gene3D G3DSA:2.40.50.320 427 500 2.3E-11 T 14-10-2018 D172_001920 64c087e824d97ece22fd83c81648bebd 516 Gene3D G3DSA:2.40.30.170 112 125 1.8E-10 T 14-10-2018 D172_001920 64c087e824d97ece22fd83c81648bebd 516 Gene3D G3DSA:2.40.50.100 126 160 1.8E-10 T 14-10-2018 D172_001920 64c087e824d97ece22fd83c81648bebd 516 Gene3D G3DSA:2.40.420.20 100 111 1.8E-10 T 14-10-2018 D172_001920 64c087e824d97ece22fd83c81648bebd 516 Gene3D G3DSA:2.40.30.170 245 319 2.5E-30 T 14-10-2018 D172_001920 64c087e824d97ece22fd83c81648bebd 516 Gene3D G3DSA:2.40.420.20 322 416 1.3E-22 T 14-10-2018 D172_001920 64c087e824d97ece22fd83c81648bebd 516 Gene3D G3DSA:1.10.287.470 161 172 1.8E-10 T 14-10-2018 D172_001920 64c087e824d97ece22fd83c81648bebd 516 Gene3D G3DSA:2.40.50.100 195 244 2.5E-30 T 14-10-2018 D172_018025 00db957facfda9865f97b5f58db02a3a 292 Pfam PF00753 Metallo-beta-lactamase superfamily 42 226 3.6E-6 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_018025 00db957facfda9865f97b5f58db02a3a 292 SUPERFAMILY SSF56281 27 246 8.68E-38 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_018025 00db957facfda9865f97b5f58db02a3a 292 SMART SM00849 42 226 6.9E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_018025 00db957facfda9865f97b5f58db02a3a 292 Gene3D G3DSA:3.60.15.10 23 236 1.4E-27 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_014950 67e7bac8179b51651ab91f489fa28848 444 SUPERFAMILY SSF51984 6 100 1.15E-13 T 14-10-2018 D172_014950 67e7bac8179b51651ab91f489fa28848 444 SUPERFAMILY SSF53623 102 302 1.44E-52 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D172_014950 67e7bac8179b51651ab91f489fa28848 444 Gene3D G3DSA:3.90.190.20 305 438 1.4E-43 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D172_014950 67e7bac8179b51651ab91f489fa28848 444 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 442 33.107 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D172_014950 67e7bac8179b51651ab91f489fa28848 444 Pfam PF02875 Mur ligase family, glutamate ligase domain 306 379 2.0E-7 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 D172_014950 67e7bac8179b51651ab91f489fa28848 444 Gene3D G3DSA:3.40.50.720 5 99 5.3E-20 T 14-10-2018 D172_014950 67e7bac8179b51651ab91f489fa28848 444 Pfam PF08245 Mur ligase middle domain 116 284 7.8E-27 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D172_014950 67e7bac8179b51651ab91f489fa28848 444 Gene3D G3DSA:3.40.1190.10 100 304 1.9E-66 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D172_014950 67e7bac8179b51651ab91f489fa28848 444 SUPERFAMILY SSF53244 304 440 4.26E-42 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D172_014950 67e7bac8179b51651ab91f489fa28848 444 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 439 3.3E-125 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 D172_018145 85a9efcc423aa4097ac349a9da3f0fae 70 Gene3D G3DSA:1.10.1660.10 1 68 9.0E-8 T 14-10-2018 D172_018145 85a9efcc423aa4097ac349a9da3f0fae 70 Pfam PF09278 MerR, DNA binding 1 51 2.0E-7 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding D172_018145 85a9efcc423aa4097ac349a9da3f0fae 70 SUPERFAMILY SSF46955 1 58 3.98E-7 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily D172_009940 26b092836f39e6cb6c4b5b13dc369a96 404 Gene3D G3DSA:3.30.420.40 200 404 9.9E-81 T 14-10-2018 D172_009940 26b092836f39e6cb6c4b5b13dc369a96 404 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 11 22 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D172_009940 26b092836f39e6cb6c4b5b13dc369a96 404 Hamap MF_00020 Acetate kinase [ackA]. 1 404 173.808 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D172_009940 26b092836f39e6cb6c4b5b13dc369a96 404 Gene3D G3DSA:3.30.420.40 8 199 9.1E-68 T 14-10-2018 D172_009940 26b092836f39e6cb6c4b5b13dc369a96 404 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 207 224 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D172_009940 26b092836f39e6cb6c4b5b13dc369a96 404 SUPERFAMILY SSF53067 160 400 1.56E-89 T 14-10-2018 D172_009940 26b092836f39e6cb6c4b5b13dc369a96 404 PRINTS PR00471 Acetate kinase family signature 382 394 2.5E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D172_009940 26b092836f39e6cb6c4b5b13dc369a96 404 PRINTS PR00471 Acetate kinase family signature 11 22 2.5E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D172_009940 26b092836f39e6cb6c4b5b13dc369a96 404 PRINTS PR00471 Acetate kinase family signature 177 190 2.5E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D172_009940 26b092836f39e6cb6c4b5b13dc369a96 404 PRINTS PR00471 Acetate kinase family signature 207 228 2.5E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D172_009940 26b092836f39e6cb6c4b5b13dc369a96 404 PRINTS PR00471 Acetate kinase family signature 326 342 2.5E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D172_009940 26b092836f39e6cb6c4b5b13dc369a96 404 PRINTS PR00471 Acetate kinase family signature 304 317 2.5E-44 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D172_009940 26b092836f39e6cb6c4b5b13dc369a96 404 Pfam PF00871 Acetokinase family 11 394 1.4E-152 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D172_009940 26b092836f39e6cb6c4b5b13dc369a96 404 TIGRFAM TIGR00016 ackA: acetate kinase 8 401 3.5E-158 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D172_009940 26b092836f39e6cb6c4b5b13dc369a96 404 PIRSF PIRSF000722 7 404 1.1E-143 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 D172_009940 26b092836f39e6cb6c4b5b13dc369a96 404 SUPERFAMILY SSF53067 10 199 2.01E-63 T 14-10-2018 D172_002605 3b87a8bf022019646b56dd18772da466 465 Gene3D G3DSA:3.40.50.300 253 463 1.2E-63 T 14-10-2018 D172_002605 3b87a8bf022019646b56dd18772da466 465 Pfam PF13638 PIN domain 12 157 2.5E-37 T 14-10-2018 IPR002716 PIN domain D172_002605 3b87a8bf022019646b56dd18772da466 465 SUPERFAMILY SSF52540 254 444 3.81E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_002605 3b87a8bf022019646b56dd18772da466 465 SMART SM00670 10 148 5.0E-7 T 14-10-2018 IPR002716 PIN domain D172_002605 3b87a8bf022019646b56dd18772da466 465 Pfam PF02562 PhoH-like protein 255 459 1.4E-52 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 D172_002605 3b87a8bf022019646b56dd18772da466 465 SUPERFAMILY SSF88723 10 169 1.31E-17 T 14-10-2018 IPR029060 PIN-like domain superfamily D172_002605 3b87a8bf022019646b56dd18772da466 465 Gene3D G3DSA:3.40.50.1010 6 162 6.8E-28 T 14-10-2018 D172_019880 2a5aea493f25d66018550f85c97de86c 338 Gene3D G3DSA:1.10.530.10 68 330 1.4E-83 T 14-10-2018 D172_019880 2a5aea493f25d66018550f85c97de86c 338 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 25 333 8.6E-103 T 14-10-2018 IPR011970 Lytic murein transglycosylase D172_019880 2a5aea493f25d66018550f85c97de86c 338 Gene3D G3DSA:1.10.8.350 39 201 1.4E-83 T 14-10-2018 D172_019880 2a5aea493f25d66018550f85c97de86c 338 Pfam PF13406 Transglycosylase SLT domain 26 331 1.9E-101 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 D172_019880 2a5aea493f25d66018550f85c97de86c 338 SUPERFAMILY SSF53955 12 334 1.07E-90 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily D172_018030 29762345c3a3f6946931c0db7211c3ea 216 Gene3D G3DSA:3.40.30.10 1 215 7.5E-42 T 14-10-2018 D172_018030 29762345c3a3f6946931c0db7211c3ea 216 SUPERFAMILY SSF52833 4 190 5.59E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_007015 080510e01e0ac3b8ac56e11e92d09e15 199 Gene3D G3DSA:3.90.950.10 4 195 5.3E-58 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D172_007015 080510e01e0ac3b8ac56e11e92d09e15 199 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 185 2.6E-49 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 D172_007015 080510e01e0ac3b8ac56e11e92d09e15 199 Hamap MF_00528 Septum formation protein Maf [maf]. 4 192 28.709 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 D172_007015 080510e01e0ac3b8ac56e11e92d09e15 199 SUPERFAMILY SSF52972 3 187 4.25E-57 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D172_007015 080510e01e0ac3b8ac56e11e92d09e15 199 Pfam PF02545 Maf-like protein 5 187 3.9E-45 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 D172_007015 080510e01e0ac3b8ac56e11e92d09e15 199 PIRSF PIRSF006305 1 194 7.2E-44 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 D172_014960 dc2dbdc7f0b7367c9bf9602a59d84c46 464 Pfam PF01225 Mur ligase family, catalytic domain 30 83 4.4E-7 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 D172_014960 dc2dbdc7f0b7367c9bf9602a59d84c46 464 Pfam PF08245 Mur ligase middle domain 109 296 1.4E-48 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D172_014960 dc2dbdc7f0b7367c9bf9602a59d84c46 464 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 453 32.417 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_014960 dc2dbdc7f0b7367c9bf9602a59d84c46 464 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 33 451 2.1E-138 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_014960 dc2dbdc7f0b7367c9bf9602a59d84c46 464 Gene3D G3DSA:3.40.1190.10 85 314 1.5E-76 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D172_014960 dc2dbdc7f0b7367c9bf9602a59d84c46 464 SUPERFAMILY SSF53623 105 314 2.62E-56 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D172_014960 dc2dbdc7f0b7367c9bf9602a59d84c46 464 SUPERFAMILY SSF63418 1 99 2.22E-22 T 14-10-2018 IPR035911 MurE/MurF, N-terminal D172_014960 dc2dbdc7f0b7367c9bf9602a59d84c46 464 Gene3D G3DSA:3.90.190.20 316 457 5.3E-40 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D172_014960 dc2dbdc7f0b7367c9bf9602a59d84c46 464 SUPERFAMILY SSF53244 317 451 1.85E-31 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D172_014960 dc2dbdc7f0b7367c9bf9602a59d84c46 464 Pfam PF02875 Mur ligase family, glutamate ligase domain 317 396 8.4E-13 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 D172_014960 dc2dbdc7f0b7367c9bf9602a59d84c46 464 Gene3D G3DSA:3.40.1390.10 1 84 1.4E-21 T 14-10-2018 D172_018470 b07f822e12b7e0069a9864e39fe43b46 805 Gene3D G3DSA:2.40.170.20 44 804 3.8E-114 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_018470 b07f822e12b7e0069a9864e39fe43b46 805 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 157 6.2E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_018470 b07f822e12b7e0069a9864e39fe43b46 805 Pfam PF00593 TonB dependent receptor 292 802 1.6E-33 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_018470 b07f822e12b7e0069a9864e39fe43b46 805 SUPERFAMILY SSF56935 25 803 7.48E-107 T 14-10-2018 D172_010165 aa5b13533c6cc2b169e0cd925e85865c 273 Gene3D G3DSA:3.20.20.70 6 272 2.2E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_010165 aa5b13533c6cc2b169e0cd925e85865c 273 Pfam PF00290 Tryptophan synthase alpha chain 13 271 9.3E-91 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D172_010165 aa5b13533c6cc2b169e0cd925e85865c 273 SUPERFAMILY SSF51366 7 271 7.06E-88 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D172_010165 aa5b13533c6cc2b169e0cd925e85865c 273 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 53 66 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D172_010165 aa5b13533c6cc2b169e0cd925e85865c 273 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 19 270 36.988 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D172_010165 aa5b13533c6cc2b169e0cd925e85865c 273 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 13 268 2.0E-98 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 D172_012025 dfa41ae969ac15255f0673c7f450921f 529 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 103 258 6.7E-29 T 14-10-2018 IPR000160 GGDEF domain D172_012025 dfa41ae969ac15255f0673c7f450921f 529 Gene3D G3DSA:3.30.70.270 100 271 2.9E-42 T 14-10-2018 D172_012025 dfa41ae969ac15255f0673c7f450921f 529 Gene3D G3DSA:3.20.20.450 273 526 5.2E-79 T 14-10-2018 IPR035919 EAL domain superfamily D172_012025 dfa41ae969ac15255f0673c7f450921f 529 SUPERFAMILY SSF55073 110 260 3.61E-37 T 14-10-2018 IPR029787 Nucleotide cyclase D172_012025 dfa41ae969ac15255f0673c7f450921f 529 Pfam PF00563 EAL domain 278 510 3.5E-66 T 14-10-2018 IPR001633 EAL domain D172_012025 dfa41ae969ac15255f0673c7f450921f 529 SMART SM00052 270 515 6.0E-78 T 14-10-2018 IPR001633 EAL domain D172_012025 dfa41ae969ac15255f0673c7f450921f 529 Pfam PF00990 Diguanylate cyclase, GGDEF domain 105 255 1.2E-35 T 14-10-2018 IPR000160 GGDEF domain D172_012025 dfa41ae969ac15255f0673c7f450921f 529 SUPERFAMILY SSF141868 278 521 3.53E-75 T 14-10-2018 IPR035919 EAL domain superfamily D172_012025 dfa41ae969ac15255f0673c7f450921f 529 SMART SM00267 94 260 1.1E-41 T 14-10-2018 IPR000160 GGDEF domain D172_008810 befd67d6b4cbbf3e5811f3e7a4fa93fc 301 SUPERFAMILY SSF52540 5 278 5.88E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_008810 befd67d6b4cbbf3e5811f3e7a4fa93fc 301 Gene3D G3DSA:3.40.50.300 16 182 2.7E-43 T 14-10-2018 D172_008810 befd67d6b4cbbf3e5811f3e7a4fa93fc 301 PIRSF PIRSF002849 1 301 2.4E-120 T 14-10-2018 D172_008810 befd67d6b4cbbf3e5811f3e7a4fa93fc 301 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 165 5.9E-63 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 D172_008810 befd67d6b4cbbf3e5811f3e7a4fa93fc 301 Gene3D G3DSA:1.10.8.300 196 300 4.3E-27 T 14-10-2018 D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 Gene3D G3DSA:2.40.33.10 71 169 1.5E-157 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 475 2.8E-32 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 SUPERFAMILY SSF52935 326 477 2.09E-38 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 PRINTS PR01050 Pyruvate kinase family signature 272 296 1.4E-52 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 PRINTS PR01050 Pyruvate kinase family signature 316 332 1.4E-52 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 PRINTS PR01050 Pyruvate kinase family signature 297 315 1.4E-52 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 PRINTS PR01050 Pyruvate kinase family signature 187 201 1.4E-52 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 PRINTS PR01050 Pyruvate kinase family signature 247 271 1.4E-52 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 PRINTS PR01050 Pyruvate kinase family signature 220 246 1.4E-52 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 PRINTS PR01050 Pyruvate kinase family signature 60 76 1.4E-52 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 Gene3D G3DSA:3.40.1380.20 339 473 1.5E-157 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 SUPERFAMILY SSF50800 71 164 1.31E-24 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 SUPERFAMILY SSF51621 2 341 2.02E-87 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 Gene3D G3DSA:3.20.20.60 3 338 1.5E-157 T 14-10-2018 D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 477 5.9E-164 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D172_009540 ad8d86a07d9010e3422800b7da5daf9a 478 Pfam PF00224 Pyruvate kinase, barrel domain 3 341 1.5E-125 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 D172_007860 0fa05bf68e988363b554f9dc863885af 72 PRINTS PR00050 Cold shock protein signature 25 34 1.6E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_007860 0fa05bf68e988363b554f9dc863885af 72 PRINTS PR00050 Cold shock protein signature 4 19 1.6E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_007860 0fa05bf68e988363b554f9dc863885af 72 PRINTS PR00050 Cold shock protein signature 40 58 1.6E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_007860 0fa05bf68e988363b554f9dc863885af 72 SUPERFAMILY SSF50249 1 65 6.37E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_007860 0fa05bf68e988363b554f9dc863885af 72 SMART SM00357 3 67 3.8E-18 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 D172_007860 0fa05bf68e988363b554f9dc863885af 72 Gene3D G3DSA:2.40.50.140 1 65 5.1E-25 T 14-10-2018 D172_007860 0fa05bf68e988363b554f9dc863885af 72 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 66 1.6E-37 T 14-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 D172_007860 0fa05bf68e988363b554f9dc863885af 72 PIRSF PIRSF002599 1 71 5.6E-22 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 D172_007860 0fa05bf68e988363b554f9dc863885af 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site D172_007860 0fa05bf68e988363b554f9dc863885af 72 Pfam PF00313 'Cold-shock' DNA-binding domain 4 65 1.9E-25 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_007750 e181fc4f6f2d72555c97a4d4d9df0180 335 Gene3D G3DSA:3.30.420.300 4 84 4.4E-21 T 14-10-2018 D172_007750 e181fc4f6f2d72555c97a4d4d9df0180 335 Gene3D G3DSA:3.30.420.310 85 323 2.2E-64 T 14-10-2018 D172_007750 e181fc4f6f2d72555c97a4d4d9df0180 335 Pfam PF05035 2-keto-3-deoxy-galactonokinase 15 318 3.4E-84 T 14-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 D172_020975 6d299231cb5eddd4eac437c7b36cbb5c 292 SUPERFAMILY SSF46785 1 113 4.09E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_020975 6d299231cb5eddd4eac437c7b36cbb5c 292 Gene3D G3DSA:3.40.190.290 92 291 3.0E-36 T 14-10-2018 D172_020975 6d299231cb5eddd4eac437c7b36cbb5c 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 6.6E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020975 6d299231cb5eddd4eac437c7b36cbb5c 292 SUPERFAMILY SSF53850 92 289 1.37E-37 T 14-10-2018 D172_020975 6d299231cb5eddd4eac437c7b36cbb5c 292 Pfam PF03466 LysR substrate binding domain 90 286 2.7E-39 T 14-10-2018 IPR005119 LysR, substrate-binding D172_020975 6d299231cb5eddd4eac437c7b36cbb5c 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020975 6d299231cb5eddd4eac437c7b36cbb5c 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020975 6d299231cb5eddd4eac437c7b36cbb5c 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020975 6d299231cb5eddd4eac437c7b36cbb5c 292 Gene3D G3DSA:1.10.10.10 1 90 7.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_001345 e13130bfa418349183f401c8914a92b9 233 SMART SM00895 101 223 3.9E-20 T 14-10-2018 IPR011711 GntR, C-terminal D172_001345 e13130bfa418349183f401c8914a92b9 233 SMART SM00345 13 72 3.0E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_001345 e13130bfa418349183f401c8914a92b9 233 SUPERFAMILY SSF46785 3 76 7.3E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_001345 e13130bfa418349183f401c8914a92b9 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 8.4E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_001345 e13130bfa418349183f401c8914a92b9 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 8.4E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_001345 e13130bfa418349183f401c8914a92b9 233 Gene3D G3DSA:1.20.120.530 99 232 1.9E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_001345 e13130bfa418349183f401c8914a92b9 233 Gene3D G3DSA:1.10.10.10 2 78 1.8E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_001345 e13130bfa418349183f401c8914a92b9 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 1.1E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_001345 e13130bfa418349183f401c8914a92b9 233 SUPERFAMILY SSF48008 100 228 2.88E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_001345 e13130bfa418349183f401c8914a92b9 233 Pfam PF07729 FCD domain 101 222 7.7E-21 T 14-10-2018 IPR011711 GntR, C-terminal D172_017720 1c0263243a2a5879cad0acaddce90caa 750 Pfam PF00593 TonB dependent receptor 352 748 2.6E-25 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_017720 1c0263243a2a5879cad0acaddce90caa 750 SUPERFAMILY SSF56935 28 750 4.76E-77 T 14-10-2018 D172_017720 1c0263243a2a5879cad0acaddce90caa 750 Gene3D G3DSA:2.40.170.20 179 750 5.9E-53 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_017720 1c0263243a2a5879cad0acaddce90caa 750 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 153 7.3E-10 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_017720 1c0263243a2a5879cad0acaddce90caa 750 Gene3D G3DSA:2.170.130.10 35 161 3.7E-9 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_003380 57564c29ffeedf3ae5ff947cb1fa812c 725 Pfam PF04055 Radical SAM superfamily 382 587 1.3E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D172_003380 57564c29ffeedf3ae5ff947cb1fa812c 725 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 26 648 49.343 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 D172_003380 57564c29ffeedf3ae5ff947cb1fa812c 725 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 26 646 6.0E-262 T 14-10-2018 IPR022946 Uncharacterised protein family UPF0313 D172_003380 57564c29ffeedf3ae5ff947cb1fa812c 725 Pfam PF08497 Radical SAM N-terminal 26 381 1.7E-143 T 14-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal D172_003380 57564c29ffeedf3ae5ff947cb1fa812c 725 Gene3D G3DSA:3.80.30.20 377 630 1.3E-14 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe D172_003380 57564c29ffeedf3ae5ff947cb1fa812c 725 SMART SM00729 378 643 8.0E-6 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D172_003380 57564c29ffeedf3ae5ff947cb1fa812c 725 Pfam PF11842 Domain of unknown function (DUF3362) 596 702 1.0E-40 T 14-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal D172_003380 57564c29ffeedf3ae5ff947cb1fa812c 725 SUPERFAMILY SSF102114 380 605 6.02E-10 T 14-10-2018 D172_003380 57564c29ffeedf3ae5ff947cb1fa812c 725 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 382 402 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 D172_019850 fd196c6371eb121d16cc9de9ab7d3cfc 550 Gene3D G3DSA:3.30.300.310 455 550 1.1E-30 T 14-10-2018 D172_019850 fd196c6371eb121d16cc9de9ab7d3cfc 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 468 542 1.6E-18 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain D172_019850 fd196c6371eb121d16cc9de9ab7d3cfc 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_019850 fd196c6371eb121d16cc9de9ab7d3cfc 550 Gene3D G3DSA:3.40.50.980 46 371 6.3E-110 T 14-10-2018 D172_019850 fd196c6371eb121d16cc9de9ab7d3cfc 550 Pfam PF00501 AMP-binding enzyme 29 459 8.6E-104 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_019850 fd196c6371eb121d16cc9de9ab7d3cfc 550 Gene3D G3DSA:3.40.50.980 51 226 6.3E-110 T 14-10-2018 D172_019850 fd196c6371eb121d16cc9de9ab7d3cfc 550 SUPERFAMILY SSF56801 14 550 8.77E-145 T 14-10-2018 D172_019850 fd196c6371eb121d16cc9de9ab7d3cfc 550 Gene3D G3DSA:2.30.38.10 376 452 6.3E-110 T 14-10-2018 D172_015765 70fedc0877b84319128376eab5d1ad95 542 SMART SM00052 293 537 1.1E-12 T 14-10-2018 IPR001633 EAL domain D172_015765 70fedc0877b84319128376eab5d1ad95 542 Gene3D G3DSA:3.20.20.450 297 540 3.8E-40 T 14-10-2018 IPR035919 EAL domain superfamily D172_015765 70fedc0877b84319128376eab5d1ad95 542 SUPERFAMILY SSF141868 304 533 1.44E-42 T 14-10-2018 IPR035919 EAL domain superfamily D172_015765 70fedc0877b84319128376eab5d1ad95 542 Pfam PF00563 EAL domain 303 532 1.2E-36 T 14-10-2018 IPR001633 EAL domain D172_007030 ad69134b0b685b308a94062553eaec31 346 Gene3D G3DSA:3.40.718.10 3 346 4.5E-124 T 14-10-2018 D172_007030 ad69134b0b685b308a94062553eaec31 346 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 342 134.106 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 D172_007030 ad69134b0b685b308a94062553eaec31 346 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 338 5.0E-106 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 D172_007030 ad69134b0b685b308a94062553eaec31 346 SUPERFAMILY SSF53659 5 338 1.85E-101 T 14-10-2018 D172_007030 ad69134b0b685b308a94062553eaec31 346 PIRSF PIRSF002465 3 342 2.0E-119 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 D172_007030 ad69134b0b685b308a94062553eaec31 346 Pfam PF02504 Fatty acid synthesis protein 6 327 1.4E-101 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 D172_018220 ac579b5d109b2a3a03240c503c90df64 786 Gene3D G3DSA:2.170.130.10 61 177 1.4E-14 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_018220 ac579b5d109b2a3a03240c503c90df64 786 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 164 2.4E-9 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_018220 ac579b5d109b2a3a03240c503c90df64 786 Pfam PF00593 TonB dependent receptor 364 783 6.9E-12 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_018220 ac579b5d109b2a3a03240c503c90df64 786 SUPERFAMILY SSF56935 62 786 1.21E-79 T 14-10-2018 D172_000200 805808d345bd771e173d62b5c1adc892 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 368 2.0E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D172_000200 805808d345bd771e173d62b5c1adc892 454 Pfam PF12631 MnmE helical domain 123 451 2.5E-61 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 D172_000200 805808d345bd771e173d62b5c1adc892 454 Gene3D G3DSA:3.40.50.300 217 382 2.2E-103 T 14-10-2018 D172_000200 805808d345bd771e173d62b5c1adc892 454 SUPERFAMILY SSF116878 121 454 1.7E-52 T 14-10-2018 D172_000200 805808d345bd771e173d62b5c1adc892 454 SUPERFAMILY SSF52540 72 372 7.17E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_000200 805808d345bd771e173d62b5c1adc892 454 Pfam PF01926 50S ribosome-binding GTPase 218 307 1.1E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_000200 805808d345bd771e173d62b5c1adc892 454 Gene3D G3DSA:3.30.1360.120 1 121 1.8E-37 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 D172_000200 805808d345bd771e173d62b5c1adc892 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 2.2E-101 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 D172_000200 805808d345bd771e173d62b5c1adc892 454 Gene3D G3DSA:1.20.120.430 122 454 2.2E-103 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 D172_000200 805808d345bd771e173d62b5c1adc892 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 7.1E-34 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 D172_000200 805808d345bd771e173d62b5c1adc892 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 32.418 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 D172_007695 5c92ace6d046a264930a4bfb6c6d6fc7 642 SUPERFAMILY SSF69318 51 134 1.44E-15 T 14-10-2018 D172_007695 5c92ace6d046a264930a4bfb6c6d6fc7 642 Pfam PF07593 ASPIC and UnbV 565 626 4.1E-9 T 14-10-2018 IPR011519 ASPIC/UnbV D172_007695 5c92ace6d046a264930a4bfb6c6d6fc7 642 SUPERFAMILY SSF69318 154 542 1.4E-26 T 14-10-2018 D172_007695 5c92ace6d046a264930a4bfb6c6d6fc7 642 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 459 527 2.0E-10 T 14-10-2018 D172_007695 5c92ace6d046a264930a4bfb6c6d6fc7 642 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 71 129 4.3E-12 T 14-10-2018 D172_018860 5c48f042536c4133875216cf88375c5c 369 PRINTS PR00116 Arginase signature 167 182 1.0E-9 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 D172_018860 5c48f042536c4133875216cf88375c5c 369 PRINTS PR00116 Arginase signature 284 313 1.0E-9 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 D172_018860 5c48f042536c4133875216cf88375c5c 369 PIRSF PIRSF036979 45 368 2.0E-37 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 D172_018860 5c48f042536c4133875216cf88375c5c 369 Pfam PF00491 Arginase family 64 342 5.3E-48 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 D172_018860 5c48f042536c4133875216cf88375c5c 369 Gene3D G3DSA:3.40.800.10 49 352 5.6E-49 T 14-10-2018 D172_018860 5c48f042536c4133875216cf88375c5c 369 SUPERFAMILY SSF52768 53 366 2.34E-57 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily D172_005445 87ff9a7c96e94563586fa75e97110b7c 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 86 5.0E-36 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_005445 87ff9a7c96e94563586fa75e97110b7c 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.847 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_005445 87ff9a7c96e94563586fa75e97110b7c 86 SUPERFAMILY SSF46992 3 86 1.83E-33 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_005445 87ff9a7c96e94563586fa75e97110b7c 86 Pfam PF01649 Ribosomal protein S20 2 84 1.1E-28 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_005445 87ff9a7c96e94563586fa75e97110b7c 86 Gene3D G3DSA:1.20.58.110 1 86 4.9E-32 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_005445 87ff9a7c96e94563586fa75e97110b7c 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 6.3E-31 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_007445 77036332762987a8012da9dcb0137f4a 1009 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 157 1.8E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_007445 77036332762987a8012da9dcb0137f4a 1009 Gene3D G3DSA:2.170.130.10 37 161 3.6E-18 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_007445 77036332762987a8012da9dcb0137f4a 1009 Pfam PF00593 TonB dependent receptor 416 1008 5.1E-30 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_007445 77036332762987a8012da9dcb0137f4a 1009 SUPERFAMILY SSF56935 38 1009 3.14E-76 T 14-10-2018 D172_007445 77036332762987a8012da9dcb0137f4a 1009 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 36 1009 1.5E-185 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_005410 2aecac44a16b33002132c6c37b3e0d9a 217 Pfam PF03922 OmpW family 22 217 5.0E-49 T 14-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 D172_005410 2aecac44a16b33002132c6c37b3e0d9a 217 SUPERFAMILY SSF56925 21 217 1.6E-24 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D172_005410 2aecac44a16b33002132c6c37b3e0d9a 217 Gene3D G3DSA:2.40.160.20 20 217 1.2E-59 T 14-10-2018 D172_016560 fb76e5a974af2b5209b2af52f8b7bf17 90 Gene3D G3DSA:3.30.750.24 1 89 5.5E-7 T 14-10-2018 IPR036513 STAS domain superfamily D172_016560 fb76e5a974af2b5209b2af52f8b7bf17 90 SUPERFAMILY SSF52091 2 84 2.55E-9 T 14-10-2018 IPR036513 STAS domain superfamily D172_016560 fb76e5a974af2b5209b2af52f8b7bf17 90 Pfam PF13466 STAS domain 2 81 6.5E-12 T 14-10-2018 IPR002645 STAS domain D172_011015 a3e8f893ce5d3429615dab80dcfa3106 193 Pfam PF08534 Redoxin 47 187 3.1E-20 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 D172_011015 a3e8f893ce5d3429615dab80dcfa3106 193 Gene3D G3DSA:3.40.30.10 26 192 9.5E-43 T 14-10-2018 D172_011015 a3e8f893ce5d3429615dab80dcfa3106 193 ProSitePatterns PS01265 Tpx family signature. 111 122 - T 14-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 D172_011015 a3e8f893ce5d3429615dab80dcfa3106 193 SUPERFAMILY SSF52833 33 188 8.66E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_002640 fde242e4e2b2dda3b65add909b88e316 67 Pfam PF11686 Protein of unknown function (DUF3283) 4 62 7.5E-25 T 14-10-2018 IPR021700 Protein of unknown function DUF3283 D172_010290 83b1716ae0e663335e05004b09dbbdd0 331 PIRSF PIRSF006468 1 331 3.1E-96 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 D172_010290 83b1716ae0e663335e05004b09dbbdd0 331 Pfam PF01063 Amino-transferase class IV 48 285 2.8E-25 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 D172_010290 83b1716ae0e663335e05004b09dbbdd0 331 SUPERFAMILY SSF56752 3 328 3.53E-78 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 D172_010290 83b1716ae0e663335e05004b09dbbdd0 331 Gene3D G3DSA:3.30.470.10 4 327 7.8E-95 T 14-10-2018 D172_010290 83b1716ae0e663335e05004b09dbbdd0 331 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 22 331 1.6E-96 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 D172_010290 83b1716ae0e663335e05004b09dbbdd0 331 Gene3D G3DSA:3.20.10.10 150 314 7.8E-95 T 14-10-2018 D172_007180 dfbe8260ba058d5c43fd1b99c4395a32 898 SUPERFAMILY SSF53706 16 594 1.1E-181 T 14-10-2018 D172_007180 dfbe8260ba058d5c43fd1b99c4395a32 898 Gene3D G3DSA:3.40.50.740 79 548 2.6E-171 T 14-10-2018 D172_007180 dfbe8260ba058d5c43fd1b99c4395a32 898 PIRSF PIRSF036643 1 726 1.2E-156 T 14-10-2018 D172_007180 dfbe8260ba058d5c43fd1b99c4395a32 898 Pfam PF00384 Molybdopterin oxidoreductase 70 493 9.2E-83 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_007180 dfbe8260ba058d5c43fd1b99c4395a32 898 SUPERFAMILY SSF50692 563 709 8.14E-39 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily D172_007180 dfbe8260ba058d5c43fd1b99c4395a32 898 Pfam PF04324 BFD-like [2Fe-2S] binding domain 835 882 2.8E-11 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain D172_007180 dfbe8260ba058d5c43fd1b99c4395a32 898 Gene3D G3DSA:2.20.25.90 16 65 6.8E-14 T 14-10-2018 D172_007180 dfbe8260ba058d5c43fd1b99c4395a32 898 SMART SM00926 13 67 1.2E-14 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_007180 dfbe8260ba058d5c43fd1b99c4395a32 898 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 16 64 1.5E-14 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_007180 dfbe8260ba058d5c43fd1b99c4395a32 898 Gene3D G3DSA:2.40.40.20 580 712 2.5E-36 T 14-10-2018 D172_007180 dfbe8260ba058d5c43fd1b99c4395a32 898 Gene3D G3DSA:3.40.228.10 144 345 2.6E-171 T 14-10-2018 D172_007180 dfbe8260ba058d5c43fd1b99c4395a32 898 Gene3D G3DSA:1.10.10.1100 833 887 5.0E-12 T 14-10-2018 D172_007180 dfbe8260ba058d5c43fd1b99c4395a32 898 Pfam PF01568 Molydopterin dinucleotide binding domain 592 701 9.9E-24 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 D172_010980 b05e4e6c28033aed8130e6d035273df5 193 PIRSF PIRSF000349 1 193 7.0E-81 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_010980 b05e4e6c28033aed8130e6d035273df5 193 SUPERFAMILY SSF54719 84 192 1.31E-39 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_010980 b05e4e6c28033aed8130e6d035273df5 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_010980 b05e4e6c28033aed8130e6d035273df5 193 Gene3D G3DSA:2.40.500.20 83 193 5.6E-40 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_010980 b05e4e6c28033aed8130e6d035273df5 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 5.8E-35 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_010980 b05e4e6c28033aed8130e6d035273df5 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 2.3E-35 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_010980 b05e4e6c28033aed8130e6d035273df5 193 SUPERFAMILY SSF46609 1 84 1.96E-35 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_010980 b05e4e6c28033aed8130e6d035273df5 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 6.7E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_010980 b05e4e6c28033aed8130e6d035273df5 193 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 6.7E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_010980 b05e4e6c28033aed8130e6d035273df5 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 6.7E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_010980 b05e4e6c28033aed8130e6d035273df5 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 6.7E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_010980 b05e4e6c28033aed8130e6d035273df5 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 6.7E-22 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_010980 b05e4e6c28033aed8130e6d035273df5 193 Gene3D G3DSA:1.10.287.990 20 82 1.6E-24 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 D172_009240 9f9d71fa3ea938c2cc6a5c63fad197ed 480 Pfam PF00884 Sulfatase 28 348 1.3E-77 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 D172_009240 9f9d71fa3ea938c2cc6a5c63fad197ed 480 Gene3D G3DSA:3.30.1120.10 377 437 7.0E-129 T 14-10-2018 D172_009240 9f9d71fa3ea938c2cc6a5c63fad197ed 480 SUPERFAMILY SSF53649 26 439 4.22E-135 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D172_009240 9f9d71fa3ea938c2cc6a5c63fad197ed 480 Gene3D G3DSA:3.40.720.10 27 376 7.0E-129 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D172_009095 9d3ee1e03e7371338c14c33fffac115d 215 PIRSF PIRSF015592 1 213 1.5E-83 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 D172_009095 9d3ee1e03e7371338c14c33fffac115d 215 Pfam PF01470 Pyroglutamyl peptidase 4 202 5.8E-80 T 14-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 D172_009095 9d3ee1e03e7371338c14c33fffac115d 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 201 37.876 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 D172_009095 9d3ee1e03e7371338c14c33fffac115d 215 SUPERFAMILY SSF53182 2 215 3.4E-73 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 D172_009095 9d3ee1e03e7371338c14c33fffac115d 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 1.7E-46 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 D172_009095 9d3ee1e03e7371338c14c33fffac115d 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 1.7E-46 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 D172_009095 9d3ee1e03e7371338c14c33fffac115d 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 1.7E-46 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 D172_009095 9d3ee1e03e7371338c14c33fffac115d 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 162 174 1.7E-46 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 D172_009095 9d3ee1e03e7371338c14c33fffac115d 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 1.7E-46 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 D172_009095 9d3ee1e03e7371338c14c33fffac115d 215 Gene3D G3DSA:3.40.630.20 2 215 1.4E-79 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 D172_009095 9d3ee1e03e7371338c14c33fffac115d 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 14-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 D172_009095 9d3ee1e03e7371338c14c33fffac115d 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 213 3.0E-78 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 D172_009095 9d3ee1e03e7371338c14c33fffac115d 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 14-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 D172_020205 ce3206f834b5163afe1e7dbdbacf4355 412 SUPERFAMILY SSF52540 112 391 9.59E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_020205 ce3206f834b5163afe1e7dbdbacf4355 412 Pfam PF13614 AAA domain 112 302 3.6E-27 T 14-10-2018 IPR025669 AAA domain D172_020205 ce3206f834b5163afe1e7dbdbacf4355 412 Gene3D G3DSA:3.40.50.300 112 400 4.2E-60 T 14-10-2018 D172_005210 c890f2abac1d0a6f4127cf1b1bdaeb4d 91 ProSitePatterns PS00018 EF-hand calcium-binding domain. 39 51 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_005210 c890f2abac1d0a6f4127cf1b1bdaeb4d 91 Gene3D G3DSA:1.10.238.10 32 86 1.0E-12 T 14-10-2018 D172_005210 c890f2abac1d0a6f4127cf1b1bdaeb4d 91 SUPERFAMILY SSF47473 35 82 2.76E-11 T 14-10-2018 IPR011992 EF-hand domain pair D172_005210 c890f2abac1d0a6f4127cf1b1bdaeb4d 91 ProSitePatterns PS00018 EF-hand calcium-binding domain. 69 81 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_005210 c890f2abac1d0a6f4127cf1b1bdaeb4d 91 Pfam PF13202 EF hand 35 52 2.4E-6 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_005210 c890f2abac1d0a6f4127cf1b1bdaeb4d 91 Pfam PF13202 EF hand 64 81 2.7E-4 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_002195 437c101e7e846a7a9d3febf4e2d0abfa 225 SMART SM00382 27 214 2.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_002195 437c101e7e846a7a9d3febf4e2d0abfa 225 Gene3D G3DSA:3.40.50.300 1 225 2.2E-63 T 14-10-2018 D172_002195 437c101e7e846a7a9d3febf4e2d0abfa 225 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 4.1E-89 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 D172_002195 437c101e7e846a7a9d3febf4e2d0abfa 225 Pfam PF00005 ABC transporter 18 165 2.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_002195 437c101e7e846a7a9d3febf4e2d0abfa 225 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_002195 437c101e7e846a7a9d3febf4e2d0abfa 225 SUPERFAMILY SSF52540 1 222 5.94E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006010 775cb4408b0b7fb31e9917c64a2bec9e 923 Pfam PF00593 TonB dependent receptor 373 921 5.4E-39 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_006010 775cb4408b0b7fb31e9917c64a2bec9e 923 Gene3D G3DSA:2.170.130.10 35 167 2.3E-38 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_006010 775cb4408b0b7fb31e9917c64a2bec9e 923 SUPERFAMILY SSF56935 39 923 1.22E-94 T 14-10-2018 D172_006010 775cb4408b0b7fb31e9917c64a2bec9e 923 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 162 1.9E-24 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_002255 b1b2a4f6d487b9b9d2dcaa1287a5bd64 241 SUPERFAMILY SSF53850 16 233 1.25E-27 T 14-10-2018 D172_002255 b1b2a4f6d487b9b9d2dcaa1287a5bd64 241 Gene3D G3DSA:3.40.190.10 24 231 1.8E-17 T 14-10-2018 D172_002255 b1b2a4f6d487b9b9d2dcaa1287a5bd64 241 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 235 1.2E-14 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D172_002255 b1b2a4f6d487b9b9d2dcaa1287a5bd64 241 Gene3D G3DSA:3.40.190.10 102 202 1.8E-17 T 14-10-2018 D172_002960 9cfee722bc0167e6415332a67cf54cd1 669 SMART SM00632 383 470 5.2E-40 T 14-10-2018 IPR031319 Alpha-amylase, C-terminal domain Reactome: R-HSA-189085 D172_002960 9cfee722bc0167e6415332a67cf54cd1 669 PRINTS PR00110 Alpha-amylase signature 102 113 1.3E-28 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 D172_002960 9cfee722bc0167e6415332a67cf54cd1 669 PRINTS PR00110 Alpha-amylase signature 278 290 1.3E-28 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 D172_002960 9cfee722bc0167e6415332a67cf54cd1 669 PRINTS PR00110 Alpha-amylase signature 220 238 1.3E-28 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 D172_002960 9cfee722bc0167e6415332a67cf54cd1 669 PRINTS PR00110 Alpha-amylase signature 70 87 1.3E-28 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 D172_002960 9cfee722bc0167e6415332a67cf54cd1 669 PRINTS PR00110 Alpha-amylase signature 192 203 1.3E-28 T 14-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 D172_002960 9cfee722bc0167e6415332a67cf54cd1 669 SMART SM00642 27 373 6.1E-82 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D172_002960 9cfee722bc0167e6415332a67cf54cd1 669 SUPERFAMILY SSF51445 26 374 4.04E-79 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_002960 9cfee722bc0167e6415332a67cf54cd1 669 Pfam PF00128 Alpha amylase, catalytic domain 82 317 6.1E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D172_002960 9cfee722bc0167e6415332a67cf54cd1 669 Gene3D G3DSA:3.20.20.80 25 378 9.5E-171 T 14-10-2018 D172_002960 9cfee722bc0167e6415332a67cf54cd1 669 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 386 467 2.4E-10 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 D172_002960 9cfee722bc0167e6415332a67cf54cd1 669 Gene3D G3DSA:2.60.40.1180 379 471 1.4E-33 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta D172_002960 9cfee722bc0167e6415332a67cf54cd1 669 SUPERFAMILY SSF51011 380 471 2.49E-31 T 14-10-2018 D172_003150 ae209cdc64f567571c8127086d653ed5 511 Gene3D G3DSA:3.20.20.70 303 510 5.9E-56 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_003150 ae209cdc64f567571c8127086d653ed5 511 Pfam PF02581 Thiamine monophosphate synthase 321 490 1.1E-51 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D172_003150 ae209cdc64f567571c8127086d653ed5 511 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 268 4.6E-78 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D172_003150 ae209cdc64f567571c8127086d653ed5 511 Gene3D G3DSA:3.40.1190.20 2 276 2.6E-92 T 14-10-2018 IPR029056 Ribokinase-like D172_003150 ae209cdc64f567571c8127086d653ed5 511 Pfam PF08543 Phosphomethylpyrimidine kinase 12 266 4.3E-77 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 D172_003150 ae209cdc64f567571c8127086d653ed5 511 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 303 508 19.412 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D172_003150 ae209cdc64f567571c8127086d653ed5 511 SUPERFAMILY SSF53613 2 269 4.05E-70 T 14-10-2018 IPR029056 Ribokinase-like D172_003150 ae209cdc64f567571c8127086d653ed5 511 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 322 502 8.6E-51 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D172_003150 ae209cdc64f567571c8127086d653ed5 511 SUPERFAMILY SSF51391 313 503 3.27E-59 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 Gene3D G3DSA:2.120.10.90 536 867 5.7E-123 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 507 3.5E-153 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 Gene3D G3DSA:3.90.199.10 33 522 8.4E-233 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 SMART SM00434 11 500 3.9E-292 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 Gene3D G3DSA:1.10.268.10 370 494 8.4E-233 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 5 867 24.418 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 Gene3D G3DSA:3.30.1360.40 236 333 8.4E-233 T 14-10-2018 D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 866 0.0 T 14-10-2018 D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 SUPERFAMILY SSF56719 30 522 4.71E-182 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 539 585 4.7E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 770 815 7.4E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 694 711 0.057 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 737 763 2.8E-5 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 819 865 1.1E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 589 638 4.6E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 689 3.0E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 D172_009195 4414fa4f6cdb754c070c9a0be6ea158a 899 SUPERFAMILY SSF101904 534 871 7.32E-104 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal D172_012035 627b52243a93bc756028f02501be14a0 482 Gene3D G3DSA:3.40.50.12160 3 134 4.1E-34 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily D172_012035 627b52243a93bc756028f02501be14a0 482 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 438 1.1E-147 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 D172_012035 627b52243a93bc756028f02501be14a0 482 SUPERFAMILY SSF102114 130 373 2.49E-62 T 14-10-2018 D172_012035 627b52243a93bc756028f02501be14a0 482 Pfam PF04055 Radical SAM superfamily 152 326 6.0E-28 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D172_012035 627b52243a93bc756028f02501be14a0 482 SMART SM00729 148 368 6.1E-61 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D172_012035 627b52243a93bc756028f02501be14a0 482 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 441 2.2E-197 T 14-10-2018 D172_012035 627b52243a93bc756028f02501be14a0 482 Pfam PF01938 TRAM domain 384 441 1.4E-16 T 14-10-2018 IPR002792 TRAM domain D172_012035 627b52243a93bc756028f02501be14a0 482 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 4.9E-30 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 D172_012035 627b52243a93bc756028f02501be14a0 482 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 442 71.759 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 D172_012035 627b52243a93bc756028f02501be14a0 482 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 152 172 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 D172_012035 627b52243a93bc756028f02501be14a0 482 Gene3D G3DSA:3.80.30.20 146 382 6.8E-81 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe D172_006720 81cee92186adbbce00987d76bad4ff6f 346 SUPERFAMILY SSF142754 28 340 2.09E-109 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 D172_006720 81cee92186adbbce00987d76bad4ff6f 346 Gene3D G3DSA:3.40.50.10800 115 339 6.3E-97 T 14-10-2018 D172_006720 81cee92186adbbce00987d76bad4ff6f 346 Gene3D G3DSA:3.40.50.10800 200 295 6.3E-97 T 14-10-2018 D172_006720 81cee92186adbbce00987d76bad4ff6f 346 Gene3D G3DSA:3.40.50.10800 31 321 6.3E-97 T 14-10-2018 D172_006720 81cee92186adbbce00987d76bad4ff6f 346 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 28 341 2.3E-115 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 D172_006720 81cee92186adbbce00987d76bad4ff6f 346 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 346 70.545 T 14-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 D172_006720 81cee92186adbbce00987d76bad4ff6f 346 Pfam PF02445 Quinolinate synthetase A protein 32 339 1.8E-104 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 D172_019215 b47f8ac486464f695637342b4fb3fa88 128 SUPERFAMILY SSF82784 1 126 9.03E-19 T 14-10-2018 IPR036102 OsmC/Ohr superfamily D172_019215 b47f8ac486464f695637342b4fb3fa88 128 Pfam PF02566 OsmC-like protein 33 124 2.4E-9 T 14-10-2018 IPR003718 OsmC/Ohr family D172_019215 b47f8ac486464f695637342b4fb3fa88 128 Gene3D G3DSA:3.30.300.20 3 127 1.5E-11 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta D172_017380 2ff3ed2b227b088da8cbc3ed6f39238e 275 Pfam PF00665 Integrase core domain 108 221 3.2E-27 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_017380 2ff3ed2b227b088da8cbc3ed6f39238e 275 SUPERFAMILY SSF53098 101 260 4.93E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_017380 2ff3ed2b227b088da8cbc3ed6f39238e 275 Gene3D G3DSA:3.30.420.10 107 243 6.5E-24 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_012510 2ff3ed2b227b088da8cbc3ed6f39238e 275 Pfam PF00665 Integrase core domain 108 221 3.2E-27 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_012510 2ff3ed2b227b088da8cbc3ed6f39238e 275 SUPERFAMILY SSF53098 101 260 4.93E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_012510 2ff3ed2b227b088da8cbc3ed6f39238e 275 Gene3D G3DSA:3.30.420.10 107 243 6.5E-24 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_018775 8546a31700957eb4ef29076e245cf554 415 Gene3D G3DSA:3.30.565.10 256 405 5.6E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_018775 8546a31700957eb4ef29076e245cf554 415 Gene3D G3DSA:1.10.287.130 201 255 5.6E-15 T 14-10-2018 D172_018775 8546a31700957eb4ef29076e245cf554 415 SUPERFAMILY SSF55874 262 405 6.16E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_019855 48a361136af26bc767474eace54f2beb 376 Gene3D G3DSA:1.10.150.80 196 294 1.0E-21 T 14-10-2018 D172_019855 48a361136af26bc767474eace54f2beb 376 SUPERFAMILY SSF47819 193 302 2.24E-27 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 D172_019855 48a361136af26bc767474eace54f2beb 376 SMART SM00341 210 290 1.7E-10 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 D172_019855 48a361136af26bc767474eace54f2beb 376 SUPERFAMILY SSF47819 297 374 1.31E-17 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 D172_019855 48a361136af26bc767474eace54f2beb 376 Pfam PF01612 3'-5' exonuclease 3 166 6.7E-34 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 D172_019855 48a361136af26bc767474eace54f2beb 376 Hamap MF_01899 Ribonuclease D [rnd]. 3 376 41.624 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 D172_019855 48a361136af26bc767474eace54f2beb 376 Gene3D G3DSA:3.30.420.10 1 193 2.1E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_019855 48a361136af26bc767474eace54f2beb 376 Pfam PF00570 HRDC domain 213 280 1.3E-14 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 D172_019855 48a361136af26bc767474eace54f2beb 376 SMART SM00474 3 171 1.9E-31 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 D172_019855 48a361136af26bc767474eace54f2beb 376 TIGRFAM TIGR01388 rnd: ribonuclease D 5 373 1.2E-116 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 D172_019855 48a361136af26bc767474eace54f2beb 376 Gene3D G3DSA:1.10.150.80 295 375 5.5E-27 T 14-10-2018 D172_019855 48a361136af26bc767474eace54f2beb 376 SUPERFAMILY SSF53098 2 209 2.4E-61 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_015115 de1cf24b585c45477056c8e6c17446b7 470 Pfam PF13181 Tetratricopeptide repeat 420 451 0.0023 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_015115 de1cf24b585c45477056c8e6c17446b7 470 Pfam PF13181 Tetratricopeptide repeat 107 135 0.0069 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_015115 de1cf24b585c45477056c8e6c17446b7 470 Gene3D G3DSA:1.25.40.10 317 466 7.7E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_015115 de1cf24b585c45477056c8e6c17446b7 470 Gene3D G3DSA:1.25.40.10 103 210 4.5E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_015115 de1cf24b585c45477056c8e6c17446b7 470 SUPERFAMILY SSF48452 98 460 5.88E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_015115 de1cf24b585c45477056c8e6c17446b7 470 Gene3D G3DSA:1.25.40.10 211 316 1.3E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_015115 de1cf24b585c45477056c8e6c17446b7 470 Pfam PF14559 Tetratricopeptide repeat 361 407 5.5E-6 T 14-10-2018 D172_015115 de1cf24b585c45477056c8e6c17446b7 470 SMART SM00028 419 452 1.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_015115 de1cf24b585c45477056c8e6c17446b7 470 SMART SM00028 137 170 62.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_015115 de1cf24b585c45477056c8e6c17446b7 470 SMART SM00028 385 418 28.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_015115 de1cf24b585c45477056c8e6c17446b7 470 SMART SM00028 171 204 0.21 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_015115 de1cf24b585c45477056c8e6c17446b7 470 SMART SM00028 103 136 6.5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_015115 de1cf24b585c45477056c8e6c17446b7 470 SMART SM00028 351 384 1.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_015115 de1cf24b585c45477056c8e6c17446b7 470 SMART SM00028 239 272 0.016 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_015115 de1cf24b585c45477056c8e6c17446b7 470 Pfam PF13429 Tetratricopeptide repeat 165 300 4.7E-15 T 14-10-2018 D172_004400 050ffe829e38b309fcc05851bdac0149 327 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 165 319 2.1E-40 T 14-10-2018 IPR000160 GGDEF domain D172_004400 050ffe829e38b309fcc05851bdac0149 327 SMART SM00065 17 164 0.0076 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_004400 050ffe829e38b309fcc05851bdac0149 327 SUPERFAMILY SSF55781 22 167 3.92E-17 T 14-10-2018 D172_004400 050ffe829e38b309fcc05851bdac0149 327 SMART SM00267 156 322 4.7E-37 T 14-10-2018 IPR000160 GGDEF domain D172_004400 050ffe829e38b309fcc05851bdac0149 327 Pfam PF13185 GAF domain 30 149 1.3E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_004400 050ffe829e38b309fcc05851bdac0149 327 Gene3D G3DSA:3.30.450.40 21 163 1.1E-12 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_004400 050ffe829e38b309fcc05851bdac0149 327 SUPERFAMILY SSF55073 172 318 7.38E-38 T 14-10-2018 IPR029787 Nucleotide cyclase D172_004400 050ffe829e38b309fcc05851bdac0149 327 Gene3D G3DSA:3.30.70.270 164 324 8.0E-44 T 14-10-2018 D172_004400 050ffe829e38b309fcc05851bdac0149 327 Pfam PF00990 Diguanylate cyclase, GGDEF domain 167 318 3.4E-38 T 14-10-2018 IPR000160 GGDEF domain D172_002470 467b78c68120bcf0343c9af6dea6fb36 394 SUPERFAMILY SSF51905 1 393 4.99E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_002470 467b78c68120bcf0343c9af6dea6fb36 394 SUPERFAMILY SSF160996 190 338 3.01E-42 T 14-10-2018 D172_002470 467b78c68120bcf0343c9af6dea6fb36 394 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 9.2E-8 T 14-10-2018 D172_002470 467b78c68120bcf0343c9af6dea6fb36 394 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 9.2E-8 T 14-10-2018 D172_002470 467b78c68120bcf0343c9af6dea6fb36 394 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 9.2E-8 T 14-10-2018 D172_002470 467b78c68120bcf0343c9af6dea6fb36 394 Gene3D G3DSA:3.50.50.60 7 388 2.2E-128 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_002470 467b78c68120bcf0343c9af6dea6fb36 394 Gene3D G3DSA:1.10.8.260 262 322 2.2E-128 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily D172_002470 467b78c68120bcf0343c9af6dea6fb36 394 Pfam PF03486 HI0933-like protein 5 392 3.8E-149 T 14-10-2018 D172_002470 467b78c68120bcf0343c9af6dea6fb36 394 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 392 8.5E-129 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like D172_002470 467b78c68120bcf0343c9af6dea6fb36 394 Gene3D G3DSA:2.40.30.10 188 339 2.2E-128 T 14-10-2018 D172_002585 51e6e9a45c3673235ccc0845fb84f9ca 288 SUPERFAMILY SSF158682 2 186 6.54E-24 T 14-10-2018 IPR029024 TerB-like D172_002585 51e6e9a45c3673235ccc0845fb84f9ca 288 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 1 287 33.877 T 14-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 D172_002585 51e6e9a45c3673235ccc0845fb84f9ca 288 SUPERFAMILY SSF46565 137 286 2.22E-25 T 14-10-2018 IPR036869 Chaperone J-domain superfamily D172_002585 51e6e9a45c3673235ccc0845fb84f9ca 288 Pfam PF05099 Tellurite resistance protein TerB 52 175 3.9E-15 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal D172_002585 51e6e9a45c3673235ccc0845fb84f9ca 288 Pfam PF00226 DnaJ domain 229 286 9.7E-10 T 14-10-2018 IPR001623 DnaJ domain D172_002585 51e6e9a45c3673235ccc0845fb84f9ca 288 PRINTS PR00625 DnaJ domain signature 269 288 2.3E-6 T 14-10-2018 IPR001623 DnaJ domain D172_002585 51e6e9a45c3673235ccc0845fb84f9ca 288 PRINTS PR00625 DnaJ domain signature 227 245 2.3E-6 T 14-10-2018 IPR001623 DnaJ domain D172_002585 51e6e9a45c3673235ccc0845fb84f9ca 288 PRINTS PR00625 DnaJ domain signature 245 260 2.3E-6 T 14-10-2018 IPR001623 DnaJ domain D172_002585 51e6e9a45c3673235ccc0845fb84f9ca 288 Gene3D G3DSA:1.10.287.110 215 287 1.2E-14 T 14-10-2018 IPR036869 Chaperone J-domain superfamily D172_002585 51e6e9a45c3673235ccc0845fb84f9ca 288 SMART SM00271 224 286 2.5E-8 T 14-10-2018 IPR001623 DnaJ domain D172_002585 51e6e9a45c3673235ccc0845fb84f9ca 288 Gene3D G3DSA:1.10.3680.10 44 195 2.2E-19 T 14-10-2018 IPR029024 TerB-like D172_001835 7f5ae34718b237e1543db0343a340721 846 Gene3D G3DSA:1.25.40.10 517 838 5.1E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_001835 7f5ae34718b237e1543db0343a340721 846 SUPERFAMILY SSF56112 6 284 1.62E-62 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily D172_001835 7f5ae34718b237e1543db0343a340721 846 SMART SM00220 8 263 1.6E-51 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 D172_001835 7f5ae34718b237e1543db0343a340721 846 SMART SM00028 677 710 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_001835 7f5ae34718b237e1543db0343a340721 846 SMART SM00028 711 744 440.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_001835 7f5ae34718b237e1543db0343a340721 846 SMART SM00028 643 676 490.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_001835 7f5ae34718b237e1543db0343a340721 846 SMART SM00028 748 781 34.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_001835 7f5ae34718b237e1543db0343a340721 846 SMART SM00028 609 642 0.53 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_001835 7f5ae34718b237e1543db0343a340721 846 Pfam PF00069 Protein kinase domain 8 254 2.0E-46 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 D172_001835 7f5ae34718b237e1543db0343a340721 846 Gene3D G3DSA:1.10.510.10 2 300 3.6E-59 T 14-10-2018 D172_001835 7f5ae34718b237e1543db0343a340721 846 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 122 134 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 D172_001835 7f5ae34718b237e1543db0343a340721 846 SUPERFAMILY SSF48452 528 809 3.79E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_000110 a02364a156149a06293701dc107e1c00 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 14-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site D172_000110 a02364a156149a06293701dc107e1c00 204 Gene3D G3DSA:3.30.230.30 1 134 1.3E-48 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily D172_000110 a02364a156149a06293701dc107e1c00 204 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 202 4.1E-62 T 14-10-2018 IPR015796 Impact family, bacterial/archaeal D172_000110 a02364a156149a06293701dc107e1c00 204 SUPERFAMILY SSF54211 3 131 7.21E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_000110 a02364a156149a06293701dc107e1c00 204 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 7.9E-27 T 14-10-2018 IPR001498 Impact, N-terminal D172_016240 dc10ea229e24ed6e4f1992283b37728a 177 SUPERFAMILY SSF56053 83 177 1.96E-37 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016240 dc10ea229e24ed6e4f1992283b37728a 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 6.3E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 D172_016240 dc10ea229e24ed6e4f1992283b37728a 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 6.3E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 D172_016240 dc10ea229e24ed6e4f1992283b37728a 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 6.3E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 D172_016240 dc10ea229e24ed6e4f1992283b37728a 177 Gene3D G3DSA:3.90.930.12 83 177 2.1E-40 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016240 dc10ea229e24ed6e4f1992283b37728a 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_016240 dc10ea229e24ed6e4f1992283b37728a 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.611 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 D172_016240 dc10ea229e24ed6e4f1992283b37728a 177 Pfam PF00347 Ribosomal protein L6 90 164 1.5E-19 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016240 dc10ea229e24ed6e4f1992283b37728a 177 Pfam PF00347 Ribosomal protein L6 11 82 6.8E-20 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016240 dc10ea229e24ed6e4f1992283b37728a 177 SUPERFAMILY SSF56053 1 82 2.88E-24 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016240 dc10ea229e24ed6e4f1992283b37728a 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 4.7E-75 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 D172_016240 dc10ea229e24ed6e4f1992283b37728a 177 Gene3D G3DSA:3.90.930.12 1 82 2.3E-30 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016240 dc10ea229e24ed6e4f1992283b37728a 177 PIRSF PIRSF002162 1 177 2.4E-45 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_014915 6b07d6233c86ef078e8c6616eff71a44 414 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 D172_014915 6b07d6233c86ef078e8c6616eff71a44 414 SUPERFAMILY SSF55307 205 319 3.66E-40 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 D172_014915 6b07d6233c86ef078e8c6616eff71a44 414 Gene3D G3DSA:3.30.1330.20 221 324 9.1E-34 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 D172_014915 6b07d6233c86ef078e8c6616eff71a44 414 SMART SM00864 13 205 3.5E-108 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D172_014915 6b07d6233c86ef078e8c6616eff71a44 414 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 7.1E-41 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D172_014915 6b07d6233c86ef078e8c6616eff71a44 414 Pfam PF12327 FtsZ family, C-terminal domain 222 316 1.2E-34 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal D172_014915 6b07d6233c86ef078e8c6616eff71a44 414 PRINTS PR00423 Cell division protein FtsZ signature 189 211 6.3E-49 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D172_014915 6b07d6233c86ef078e8c6616eff71a44 414 PRINTS PR00423 Cell division protein FtsZ signature 126 147 6.3E-49 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D172_014915 6b07d6233c86ef078e8c6616eff71a44 414 PRINTS PR00423 Cell division protein FtsZ signature 212 233 6.3E-49 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D172_014915 6b07d6233c86ef078e8c6616eff71a44 414 PRINTS PR00423 Cell division protein FtsZ signature 98 118 6.3E-49 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 D172_014915 6b07d6233c86ef078e8c6616eff71a44 414 Gene3D G3DSA:3.40.50.1440 3 220 2.2E-79 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 D172_014915 6b07d6233c86ef078e8c6616eff71a44 414 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 320 9.9E-132 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 D172_014915 6b07d6233c86ef078e8c6616eff71a44 414 SMART SM00865 207 325 2.4E-52 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 D172_014915 6b07d6233c86ef078e8c6616eff71a44 414 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 D172_014915 6b07d6233c86ef078e8c6616eff71a44 414 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 365 37.236 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 D172_014915 6b07d6233c86ef078e8c6616eff71a44 414 SUPERFAMILY SSF52490 14 205 1.1E-67 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 D172_014185 97c7d163be7faad822855115dc95b808 479 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 344 410 6.6E-16 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D172_014185 97c7d163be7faad822855115dc95b808 479 SUPERFAMILY SSF52374 343 476 4.64E-23 T 14-10-2018 D172_014185 97c7d163be7faad822855115dc95b808 479 Gene3D G3DSA:3.40.50.620 327 479 2.1E-40 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_014185 97c7d163be7faad822855115dc95b808 479 Gene3D G3DSA:3.40.1190.20 4 309 4.2E-107 T 14-10-2018 IPR029056 Ribokinase-like D172_014185 97c7d163be7faad822855115dc95b808 479 Hamap MF_01603 Bifunctional protein HldE [hldE]. 5 479 39.977 T 14-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 D172_014185 97c7d163be7faad822855115dc95b808 479 Pfam PF00294 pfkB family carbohydrate kinase 13 305 2.4E-42 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB D172_014185 97c7d163be7faad822855115dc95b808 479 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 311 1.2E-112 T 14-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 D172_014185 97c7d163be7faad822855115dc95b808 479 Pfam PF01467 Cytidylyltransferase-like 347 443 8.8E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D172_014185 97c7d163be7faad822855115dc95b808 479 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 336 479 6.3E-60 T 14-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 D172_014185 97c7d163be7faad822855115dc95b808 479 SUPERFAMILY SSF53613 13 313 1.04E-58 T 14-10-2018 IPR029056 Ribokinase-like D172_017945 8010232e96c3bbe99bab91b68b5e2d59 160 Gene3D G3DSA:3.50.30.40 1 160 6.2E-54 T 14-10-2018 D172_017945 8010232e96c3bbe99bab91b68b5e2d59 160 TIGRFAM TIGR01935 NOT-MenG: RraA family 6 155 7.8E-51 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 D172_017945 8010232e96c3bbe99bab91b68b5e2d59 160 SUPERFAMILY SSF89562 5 159 9.81E-45 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily D172_017945 8010232e96c3bbe99bab91b68b5e2d59 160 Pfam PF03737 Aldolase/RraA 8 154 3.3E-38 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein D172_001535 75c2bf182510cc537d8c767003a3d3b0 256 Gene3D G3DSA:3.40.190.80 154 255 8.8E-34 T 14-10-2018 D172_001535 75c2bf182510cc537d8c767003a3d3b0 256 Pfam PF00459 Inositol monophosphatase family 5 244 5.7E-52 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D172_001535 75c2bf182510cc537d8c767003a3d3b0 256 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 7 252 1.7E-95 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 D172_001535 75c2bf182510cc537d8c767003a3d3b0 256 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site D172_001535 75c2bf182510cc537d8c767003a3d3b0 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.1E-10 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D172_001535 75c2bf182510cc537d8c767003a3d3b0 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 1.1E-10 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D172_001535 75c2bf182510cc537d8c767003a3d3b0 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.1E-10 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D172_001535 75c2bf182510cc537d8c767003a3d3b0 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 1.1E-10 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D172_001535 75c2bf182510cc537d8c767003a3d3b0 256 Gene3D G3DSA:3.30.540.10 3 153 3.0E-46 T 14-10-2018 D172_001535 75c2bf182510cc537d8c767003a3d3b0 256 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 6 254 41.656 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 D172_001535 75c2bf182510cc537d8c767003a3d3b0 256 SUPERFAMILY SSF56655 4 253 7.46E-75 T 14-10-2018 D172_004515 bce2c9d801c0367438c28e5fd2a2a135 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 5 192 1.9E-51 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase D172_004515 bce2c9d801c0367438c28e5fd2a2a135 198 Gene3D G3DSA:3.40.50.10420 1 197 3.0E-54 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily D172_004515 bce2c9d801c0367438c28e5fd2a2a135 198 SUPERFAMILY SSF100950 4 198 8.37E-53 T 14-10-2018 IPR037171 NagB/RpiA transferase-like D172_004515 bce2c9d801c0367438c28e5fd2a2a135 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 6 192 3.7E-44 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase D172_004515 bce2c9d801c0367438c28e5fd2a2a135 198 PIRSF PIRSF006806 1 195 1.7E-38 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase D172_012640 c28424745717c73677aace69a31e1629 450 Gene3D G3DSA:2.30.42.10 220 309 5.8E-19 T 14-10-2018 D172_012640 c28424745717c73677aace69a31e1629 450 SUPERFAMILY SSF50156 88 186 1.05E-13 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 D172_012640 c28424745717c73677aace69a31e1629 450 Pfam PF02163 Peptidase family M50 11 438 1.3E-83 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 D172_012640 c28424745717c73677aace69a31e1629 450 SUPERFAMILY SSF50156 206 290 8.41E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 D172_012640 c28424745717c73677aace69a31e1629 450 Pfam PF13180 PDZ domain 220 287 3.0E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 D172_012640 c28424745717c73677aace69a31e1629 450 Gene3D G3DSA:2.30.42.10 126 219 1.1E-21 T 14-10-2018 D172_012640 c28424745717c73677aace69a31e1629 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 450 1.3E-131 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 D172_012640 c28424745717c73677aace69a31e1629 450 SMART SM00228 210 279 9.4E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 D172_012640 c28424745717c73677aace69a31e1629 450 SMART SM00228 118 186 0.017 T 14-10-2018 IPR001478 PDZ domain GO:0005515 D172_012435 148e1beb8d64b12cafd3a4e2ad984144 153 Gene3D G3DSA:1.10.490.10 2 127 2.2E-13 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 D172_012435 148e1beb8d64b12cafd3a4e2ad984144 153 SUPERFAMILY SSF46458 42 125 2.89E-11 T 14-10-2018 IPR009050 Globin-like superfamily D172_002710 23cff160d999ce0e1ed1a4bab0021975 346 SUPERFAMILY SSF52540 5 332 4.28E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_002710 23cff160d999ce0e1ed1a4bab0021975 346 Gene3D G3DSA:3.40.50.300 101 345 1.3E-105 T 14-10-2018 D172_002710 23cff160d999ce0e1ed1a4bab0021975 346 Gene3D G3DSA:3.30.450.90 1 100 2.1E-34 T 14-10-2018 D172_002710 23cff160d999ce0e1ed1a4bab0021975 346 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 14-10-2018 IPR001482 Type II/IV secretion system protein D172_002710 23cff160d999ce0e1ed1a4bab0021975 346 Pfam PF00437 Type II/IV secretion system protein 12 268 4.4E-48 T 14-10-2018 IPR001482 Type II/IV secretion system protein D172_002710 23cff160d999ce0e1ed1a4bab0021975 346 SMART SM00382 122 247 7.1E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_002710 23cff160d999ce0e1ed1a4bab0021975 346 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 4.6E-152 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 D172_006095 4d426587a0faba61429f6ccb2d445b84 106 SUPERFAMILY SSF158452 1 104 1.1E-32 T 14-10-2018 IPR036814 YqcC-like superfamily D172_006095 4d426587a0faba61429f6ccb2d445b84 106 Gene3D G3DSA:1.20.1440.40 1 102 4.6E-31 T 14-10-2018 IPR036814 YqcC-like superfamily D172_006095 4d426587a0faba61429f6ccb2d445b84 106 Pfam PF04287 tRNA pseudouridine synthase C 5 99 6.7E-31 T 14-10-2018 IPR023376 YqcC-like domain D172_019875 9a44b4d487ac61570da9e423980dcbb4 95 Hamap MF_01866 Protein YcgL [ycgL]. 1 90 23.367 T 14-10-2018 IPR027354 YcgL domain D172_019875 9a44b4d487ac61570da9e423980dcbb4 95 Pfam PF05166 YcgL domain 4 77 1.3E-27 T 14-10-2018 IPR027354 YcgL domain D172_019875 9a44b4d487ac61570da9e423980dcbb4 95 Gene3D G3DSA:3.10.510.20 1 76 6.2E-24 T 14-10-2018 IPR038068 YcgL-like superfamily D172_019875 9a44b4d487ac61570da9e423980dcbb4 95 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 76 3.0E-30 T 14-10-2018 IPR027354 YcgL domain D172_019875 9a44b4d487ac61570da9e423980dcbb4 95 SUPERFAMILY SSF160191 1 91 1.83E-32 T 14-10-2018 IPR038068 YcgL-like superfamily D172_002515 86c50d7e59aace44d02c1cd1bf595a3c 413 Gene3D G3DSA:3.40.50.10180 38 248 1.7E-119 T 14-10-2018 IPR038614 Glycerate kinase, N-terminal domain superfamily Reactome: R-HSA-70350 D172_002515 86c50d7e59aace44d02c1cd1bf595a3c 413 Pfam PF13660 Domain of unknown function (DUF4147) 10 229 3.7E-66 T 14-10-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 D172_002515 86c50d7e59aace44d02c1cd1bf595a3c 413 SUPERFAMILY SSF82544 3 412 3.4E-122 T 14-10-2018 D172_002515 86c50d7e59aace44d02c1cd1bf595a3c 413 Gene3D G3DSA:3.40.1480.10 249 407 1.7E-119 T 14-10-2018 IPR037035 Glycerate kinase-like, C-terminal domain superfamily D172_002515 86c50d7e59aace44d02c1cd1bf595a3c 413 Pfam PF05161 MOFRL family 301 406 1.1E-31 T 14-10-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 D172_008200 f8ec4c55104c3c1d349a9fc20f983481 674 Gene3D G3DSA:2.30.42.10 235 321 2.0E-12 T 14-10-2018 D172_008200 f8ec4c55104c3c1d349a9fc20f983481 674 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 534 666 1.1E-37 T 14-10-2018 IPR020992 Tail specific protease, C-terminal D172_008200 f8ec4c55104c3c1d349a9fc20f983481 674 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 197 551 1.0E-102 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 D172_008200 f8ec4c55104c3c1d349a9fc20f983481 674 Pfam PF03572 Peptidase family S41 360 529 8.6E-51 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D172_008200 f8ec4c55104c3c1d349a9fc20f983481 674 SUPERFAMILY SSF50156 245 316 1.98E-10 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 D172_008200 f8ec4c55104c3c1d349a9fc20f983481 674 Gene3D G3DSA:3.90.226.10 324 549 1.9E-57 T 14-10-2018 D172_008200 f8ec4c55104c3c1d349a9fc20f983481 674 SMART SM00228 245 322 3.1E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 D172_008200 f8ec4c55104c3c1d349a9fc20f983481 674 SUPERFAMILY SSF52096 167 547 4.31E-70 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_008200 f8ec4c55104c3c1d349a9fc20f983481 674 SMART SM00245 326 531 6.1E-58 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D172_008200 f8ec4c55104c3c1d349a9fc20f983481 674 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 237 317 3.1E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 D172_006635 e1f596e2638118613eb2d71ba0db053e 174 Gene3D G3DSA:3.30.420.10 2 159 4.1E-51 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_006635 e1f596e2638118613eb2d71ba0db053e 174 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 D172_006635 e1f596e2638118613eb2d71ba0db053e 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 9.3E-40 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D172_006635 e1f596e2638118613eb2d71ba0db053e 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 9.3E-40 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D172_006635 e1f596e2638118613eb2d71ba0db053e 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 9.3E-40 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D172_006635 e1f596e2638118613eb2d71ba0db053e 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 9.3E-40 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D172_006635 e1f596e2638118613eb2d71ba0db053e 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 9.3E-40 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D172_006635 e1f596e2638118613eb2d71ba0db053e 174 SUPERFAMILY SSF53098 3 156 3.79E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_006635 e1f596e2638118613eb2d71ba0db053e 174 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 157 1.2E-67 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D172_006635 e1f596e2638118613eb2d71ba0db053e 174 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.057 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D172_006635 e1f596e2638118613eb2d71ba0db053e 174 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 9.1E-59 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 D172_009905 811cc2d82b804d11b27413d8146ee272 196 Pfam PF04079 Segregation and condensation complex subunit ScpB 14 173 4.0E-51 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 D172_009905 811cc2d82b804d11b27413d8146ee272 196 PIRSF PIRSF019345 3 193 6.4E-58 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 D172_009905 811cc2d82b804d11b27413d8146ee272 196 SUPERFAMILY SSF46785 7 88 8.89E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_009905 811cc2d82b804d11b27413d8146ee272 196 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 11 184 1.9E-33 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 D172_009905 811cc2d82b804d11b27413d8146ee272 196 SUPERFAMILY SSF46785 90 165 2.72E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_009905 811cc2d82b804d11b27413d8146ee272 196 Gene3D G3DSA:1.10.10.10 5 87 7.9E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_009905 811cc2d82b804d11b27413d8146ee272 196 Gene3D G3DSA:1.10.10.10 88 184 2.2E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_019825 da053e1f84750427a6c89fad9ba129df 233 SUPERFAMILY SSF53067 114 219 1.14E-19 T 14-10-2018 D172_019825 da053e1f84750427a6c89fad9ba129df 233 Gene3D G3DSA:3.30.420.40 97 190 1.8E-68 T 14-10-2018 D172_019825 da053e1f84750427a6c89fad9ba129df 233 SUPERFAMILY SSF53067 5 108 2.81E-28 T 14-10-2018 D172_019825 da053e1f84750427a6c89fad9ba129df 233 Pfam PF00814 Glycoprotease family 32 149 9.1E-30 T 14-10-2018 IPR000905 Gcp-like domain D172_019825 da053e1f84750427a6c89fad9ba129df 233 Gene3D G3DSA:3.30.420.40 6 221 1.8E-68 T 14-10-2018 D172_019825 da053e1f84750427a6c89fad9ba129df 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 6 221 1.9E-58 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 D172_011425 b8c3119e9c26e517ba64edbe3adb5447 221 Pfam PF04055 Radical SAM superfamily 27 135 2.1E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D172_011425 b8c3119e9c26e517ba64edbe3adb5447 221 SUPERFAMILY SSF102114 27 187 1.44E-8 T 14-10-2018 D172_011425 b8c3119e9c26e517ba64edbe3adb5447 221 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 220 3.0E-111 T 14-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 D172_011425 b8c3119e9c26e517ba64edbe3adb5447 221 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 221 34.694 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 D172_011425 b8c3119e9c26e517ba64edbe3adb5447 221 Gene3D G3DSA:3.20.20.70 1 221 6.4E-54 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_011425 b8c3119e9c26e517ba64edbe3adb5447 221 PIRSF PIRSF000370 1 221 7.2E-63 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 D172_011425 b8c3119e9c26e517ba64edbe3adb5447 221 Pfam PF13394 4Fe-4S single cluster domain 23 125 3.8E-13 T 14-10-2018 D172_014985 c22d1415941d2a85e847b9cdfd54ef66 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 51.763 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 D172_014985 c22d1415941d2a85e847b9cdfd54ef66 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 129 5.0E-69 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 D172_014985 c22d1415941d2a85e847b9cdfd54ef66 152 SUPERFAMILY SSF89447 1 135 1.47E-44 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily D172_014985 c22d1415941d2a85e847b9cdfd54ef66 152 Gene3D G3DSA:2.40.330.20 1 141 9.0E-44 T 14-10-2018 IPR038619 MraZ superfamily D172_014985 c22d1415941d2a85e847b9cdfd54ef66 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 2.6E-18 T 14-10-2018 IPR020603 MraZ domain D172_014985 c22d1415941d2a85e847b9cdfd54ef66 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 135 3.1E-18 T 14-10-2018 IPR020603 MraZ domain D172_014985 c22d1415941d2a85e847b9cdfd54ef66 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 137 6.9E-49 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 D172_013700 b02cde41bfcf5060907f3b15ef770595 264 Gene3D G3DSA:1.10.287.1080 136 264 8.1E-41 T 14-10-2018 D172_013700 b02cde41bfcf5060907f3b15ef770595 264 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 172 235 7.0E-7 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core D172_013700 b02cde41bfcf5060907f3b15ef770595 264 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 30 103 3.4E-24 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core D172_013700 b02cde41bfcf5060907f3b15ef770595 264 SUPERFAMILY SSF101386 142 242 4.11E-22 T 14-10-2018 D172_013700 b02cde41bfcf5060907f3b15ef770595 264 SUPERFAMILY SSF101386 7 106 8.22E-24 T 14-10-2018 D172_013700 b02cde41bfcf5060907f3b15ef770595 264 Gene3D G3DSA:1.10.287.1080 3 127 1.6E-45 T 14-10-2018 D172_013700 b02cde41bfcf5060907f3b15ef770595 264 TIGRFAM TIGR00444 mazG: MazG family protein 13 262 1.9E-89 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG D172_010305 37fce60cfc333daf949613403ad90326 391 Pfam PF07995 Glucose / Sorbosone dehydrogenase 60 382 2.1E-113 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase D172_010305 37fce60cfc333daf949613403ad90326 391 SUPERFAMILY SSF50952 52 377 8.24E-39 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 D172_010305 37fce60cfc333daf949613403ad90326 391 Gene3D G3DSA:2.120.10.30 44 390 2.0E-100 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_008680 0735a3f1c1b66bc013d1474e9f0e08bc 160 SUPERFAMILY SSF55729 5 150 1.71E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_008680 0735a3f1c1b66bc013d1474e9f0e08bc 160 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 6.7E-22 T 14-10-2018 IPR000182 GNAT domain D172_008680 0735a3f1c1b66bc013d1474e9f0e08bc 160 Gene3D G3DSA:3.40.630.30 5 159 3.4E-31 T 14-10-2018 D172_001350 342f61f66f7f1f3b14e52812c8c5b5f6 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 6.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001350 342f61f66f7f1f3b14e52812c8c5b5f6 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 6.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001350 342f61f66f7f1f3b14e52812c8c5b5f6 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 6.7E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001350 342f61f66f7f1f3b14e52812c8c5b5f6 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 250 7.1E-59 T 14-10-2018 D172_001350 342f61f66f7f1f3b14e52812c8c5b5f6 252 SUPERFAMILY SSF51735 12 251 1.05E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_001350 342f61f66f7f1f3b14e52812c8c5b5f6 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001350 342f61f66f7f1f3b14e52812c8c5b5f6 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001350 342f61f66f7f1f3b14e52812c8c5b5f6 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001350 342f61f66f7f1f3b14e52812c8c5b5f6 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001350 342f61f66f7f1f3b14e52812c8c5b5f6 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001350 342f61f66f7f1f3b14e52812c8c5b5f6 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.0E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001350 342f61f66f7f1f3b14e52812c8c5b5f6 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D172_001350 342f61f66f7f1f3b14e52812c8c5b5f6 252 Gene3D G3DSA:3.40.50.720 2 252 1.5E-72 T 14-10-2018 D172_011880 206b3feb1b1d461ea82d01f84d265fcd 361 Gene3D G3DSA:3.40.50.150 174 354 7.4E-53 T 14-10-2018 D172_011880 206b3feb1b1d461ea82d01f84d265fcd 361 Gene3D G3DSA:3.30.70.2810 1 78 1.8E-28 T 14-10-2018 D172_011880 206b3feb1b1d461ea82d01f84d265fcd 361 Pfam PF01728 FtsJ-like methyltransferase 184 282 1.9E-7 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 D172_011880 206b3feb1b1d461ea82d01f84d265fcd 361 SUPERFAMILY SSF53335 182 280 3.38E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_011880 206b3feb1b1d461ea82d01f84d265fcd 361 Gene3D G3DSA:3.30.2300.20 79 173 2.6E-32 T 14-10-2018 D172_011880 206b3feb1b1d461ea82d01f84d265fcd 361 PIRSF PIRSF028774 1 357 2.2E-157 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 D172_011880 206b3feb1b1d461ea82d01f84d265fcd 361 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 353 81.939 T 14-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 D172_009055 a9bc435fe69e041cb0e2a06aceb4253d 232 SMART SM00882 8 219 4.8E-86 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 D172_009055 a9bc435fe69e041cb0e2a06aceb4253d 232 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 14-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 D172_009055 a9bc435fe69e041cb0e2a06aceb4253d 232 Gene3D G3DSA:3.40.1080.10 2 228 2.4E-95 T 14-10-2018 D172_009055 a9bc435fe69e041cb0e2a06aceb4253d 232 SUPERFAMILY SSF100950 5 226 7.67E-85 T 14-10-2018 IPR037171 NagB/RpiA transferase-like D172_009055 a9bc435fe69e041cb0e2a06aceb4253d 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 5 218 1.8E-76 T 14-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 D172_009055 a9bc435fe69e041cb0e2a06aceb4253d 232 Pfam PF01144 Coenzyme A transferase 12 218 5.8E-73 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 D172_000940 6395d7b45cdf23299023f8b11b395141 187 SUPERFAMILY SSF51283 1 175 1.16E-21 T 14-10-2018 IPR036157 dUTPase-like superfamily D172_000940 6395d7b45cdf23299023f8b11b395141 187 Gene3D G3DSA:2.70.40.10 1 183 2.1E-33 T 14-10-2018 IPR036157 dUTPase-like superfamily D172_015745 19818025bb5b46de0ef140f9a6aa6bc7 277 Pfam PF04085 rod shape-determining protein MreC 120 266 1.9E-34 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 D172_015745 19818025bb5b46de0ef140f9a6aa6bc7 277 Gene3D G3DSA:2.40.10.350 177 254 3.7E-32 T 14-10-2018 D172_015745 19818025bb5b46de0ef140f9a6aa6bc7 277 PIRSF PIRSF038471 1 277 7.3E-74 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 D172_015745 19818025bb5b46de0ef140f9a6aa6bc7 277 Gene3D G3DSA:2.40.10.340 118 262 3.7E-32 T 14-10-2018 D172_015745 19818025bb5b46de0ef140f9a6aa6bc7 277 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 2 271 3.1E-79 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 D172_001275 084af70ac9b9c6405c3bfd188f34470c 210 Gene3D G3DSA:2.60.120.620 1 210 5.4E-49 T 14-10-2018 D172_001275 084af70ac9b9c6405c3bfd188f34470c 210 Pfam PF10014 2OG-Fe dioxygenase 24 209 6.0E-54 T 14-10-2018 IPR018724 2OG-Fe dioxygenase D172_003430 58e28ee747ae56283aa67cf24456e923 184 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 184 22.612 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 D172_003430 58e28ee747ae56283aa67cf24456e923 184 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 181 5.3E-48 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 D172_003430 58e28ee747ae56283aa67cf24456e923 184 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 7 181 1.3E-45 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related D172_003430 58e28ee747ae56283aa67cf24456e923 184 PIRSF PIRSF028513 1 184 2.7E-46 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 D172_003430 58e28ee747ae56283aa67cf24456e923 184 Gene3D G3DSA:2.60.450.10 60 184 8.5E-39 T 14-10-2018 D172_011215 9587c5822a787cdeecb49790704f0786 144 Gene3D G3DSA:3.40.50.300 23 132 3.4E-14 T 14-10-2018 D172_011215 9587c5822a787cdeecb49790704f0786 144 SUPERFAMILY SSF52540 33 112 4.41E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_011215 9587c5822a787cdeecb49790704f0786 144 Pfam PF03846 Cell division inhibitor SulA 25 106 2.3E-6 T 14-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 Gene3D G3DSA:2.40.37.10 8 353 3.3E-128 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 SMART SM01005 233 358 7.9E-62 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 SUPERFAMILY SSF51419 8 234 1.83E-68 T 14-10-2018 IPR029066 PLP-binding barrel D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 Hamap MF_01201 Alanine racemase. 1 358 33.863 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 SUPERFAMILY SSF50621 226 357 2.3E-44 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 PRINTS PR00992 Alanine racemase signature 26 42 7.2E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 PRINTS PR00992 Alanine racemase signature 155 166 7.2E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 PRINTS PR00992 Alanine racemase signature 340 353 7.2E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 PRINTS PR00992 Alanine racemase signature 60 78 7.2E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 PRINTS PR00992 Alanine racemase signature 266 281 7.2E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 PRINTS PR00992 Alanine racemase signature 120 132 7.2E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 PRINTS PR00992 Alanine racemase signature 287 304 7.2E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 PRINTS PR00992 Alanine racemase signature 192 219 7.2E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 PRINTS PR00992 Alanine racemase signature 249 264 7.2E-65 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 TIGRFAM TIGR00492 alr: alanine racemase 4 357 1.5E-118 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 4.9E-66 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 Gene3D G3DSA:3.20.20.10 10 217 3.3E-128 T 14-10-2018 IPR029066 PLP-binding barrel D172_003950 8de72d95765ff8413fbc8c4db9b9e681 359 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 1.4E-39 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 D172_000305 9fcac1f151e3ed928642d1f5aa89d31e 256 Pfam PF17131 Outer membrane lipoprotein-sorting protein 80 245 1.8E-34 T 14-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein D172_000305 9fcac1f151e3ed928642d1f5aa89d31e 256 Gene3D G3DSA:2.50.20.10 33 247 2.7E-38 T 14-10-2018 D172_000305 9fcac1f151e3ed928642d1f5aa89d31e 256 SUPERFAMILY SSF89392 82 243 3.77E-6 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX D172_000305 9fcac1f151e3ed928642d1f5aa89d31e 256 PIRSF PIRSF028205 1 250 9.1E-70 T 14-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 D172_015950 7f13eff0ffbe0bb687ec8bd742308ae8 592 Gene3D G3DSA:3.20.20.450 331 584 3.3E-52 T 14-10-2018 IPR035919 EAL domain superfamily D172_015950 7f13eff0ffbe0bb687ec8bd742308ae8 592 SMART SM00267 140 316 0.0032 T 14-10-2018 IPR000160 GGDEF domain D172_015950 7f13eff0ffbe0bb687ec8bd742308ae8 592 SUPERFAMILY SSF141868 333 581 8.63E-50 T 14-10-2018 IPR035919 EAL domain superfamily D172_015950 7f13eff0ffbe0bb687ec8bd742308ae8 592 Gene3D G3DSA:3.30.70.270 155 330 1.4E-16 T 14-10-2018 D172_015950 7f13eff0ffbe0bb687ec8bd742308ae8 592 Pfam PF00563 EAL domain 341 566 1.4E-43 T 14-10-2018 IPR001633 EAL domain D172_015950 7f13eff0ffbe0bb687ec8bd742308ae8 592 SMART SM00052 326 571 6.9E-30 T 14-10-2018 IPR001633 EAL domain D172_015950 7f13eff0ffbe0bb687ec8bd742308ae8 592 SUPERFAMILY SSF55073 171 306 2.82E-12 T 14-10-2018 IPR029787 Nucleotide cyclase D172_015950 7f13eff0ffbe0bb687ec8bd742308ae8 592 Pfam PF00990 Diguanylate cyclase, GGDEF domain 181 306 4.2E-10 T 14-10-2018 IPR000160 GGDEF domain D172_013915 8d47b40850ad50130db19379b7957c80 217 Pfam PF13972 Bacterial transcriptional repressor 57 196 1.5E-36 T 14-10-2018 IPR025722 Bacterial transcriptional repressor TetR D172_013915 8d47b40850ad50130db19379b7957c80 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 3.0E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_013915 8d47b40850ad50130db19379b7957c80 217 SUPERFAMILY SSF46689 3 65 1.02E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_013915 8d47b40850ad50130db19379b7957c80 217 Gene3D G3DSA:1.10.357.10 1 211 1.7E-64 T 14-10-2018 D172_013915 8d47b40850ad50130db19379b7957c80 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_013915 8d47b40850ad50130db19379b7957c80 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_014530 4b9775d78c6072e70ec7cd417e064784 299 Gene3D G3DSA:3.30.70.270 136 299 4.6E-40 T 14-10-2018 D172_014530 4b9775d78c6072e70ec7cd417e064784 299 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 147 298 2.2E-33 T 14-10-2018 IPR000160 GGDEF domain D172_014530 4b9775d78c6072e70ec7cd417e064784 299 SMART SM00267 137 299 9.8E-36 T 14-10-2018 IPR000160 GGDEF domain D172_014530 4b9775d78c6072e70ec7cd417e064784 299 SUPERFAMILY SSF55073 153 298 2.75E-36 T 14-10-2018 IPR029787 Nucleotide cyclase D172_014530 4b9775d78c6072e70ec7cd417e064784 299 Pfam PF00990 Diguanylate cyclase, GGDEF domain 150 295 4.2E-33 T 14-10-2018 IPR000160 GGDEF domain D172_014650 332a77e709947929e724782f5dd2fc49 365 ProSitePatterns PS00018 EF-hand calcium-binding domain. 55 67 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_014650 332a77e709947929e724782f5dd2fc49 365 Gene3D G3DSA:2.60.120.1610 54 365 7.7E-99 T 14-10-2018 D172_014650 332a77e709947929e724782f5dd2fc49 365 SUPERFAMILY SSF49899 43 357 1.11E-45 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D172_014650 332a77e709947929e724782f5dd2fc49 365 Pfam PF08787 Alginate lyase 43 358 2.0E-80 T 14-10-2018 IPR014895 Alginate lyase 2 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 Gene3D G3DSA:3.50.50.60 213 505 8.6E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 Gene3D G3DSA:3.50.50.60 323 446 8.6E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 SUPERFAMILY SSF51905 204 511 2.22E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 498 3.1E-45 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 PIRSF PIRSF000238 1 518 1.3E-244 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 341 361 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 349 373 3.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 401 417 3.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 440 461 3.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 334 346 3.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 3.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 475 493 3.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 3.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 312 320 3.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 3.0E-62 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 SUPERFAMILY SSF52833 1 101 1.79E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 Pfam PF13192 Thioredoxin domain 120 193 2.9E-12 T 14-10-2018 IPR012336 Thioredoxin-like fold D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 Gene3D G3DSA:3.40.30.80 1 200 2.0E-61 T 14-10-2018 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 SUPERFAMILY SSF52833 107 196 7.0E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 311 329 4.3E-37 T 14-10-2018 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 4.3E-37 T 14-10-2018 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 465 487 4.3E-37 T 14-10-2018 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 353 371 4.3E-37 T 14-10-2018 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 438 454 4.3E-37 T 14-10-2018 D172_018530 f10681ec70b45c874f1cc03d2c581fba 526 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 515 9.7E-234 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 D172_018705 cf14f4f74f6b9adef99e8a742c36f079 450 SUPERFAMILY SSF46689 135 181 4.93E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_018705 cf14f4f74f6b9adef99e8a742c36f079 450 SUPERFAMILY SSF57884 6 85 1.24E-28 T 14-10-2018 IPR035451 Ada-like domain superfamily D172_018705 cf14f4f74f6b9adef99e8a742c36f079 450 SUPERFAMILY SSF48150 296 448 8.72E-23 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 D172_018705 cf14f4f74f6b9adef99e8a742c36f079 450 SUPERFAMILY SSF46689 86 129 1.88E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_018705 cf14f4f74f6b9adef99e8a742c36f079 450 Pfam PF02805 Metal binding domain of Ada 8 69 2.9E-26 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 D172_018705 cf14f4f74f6b9adef99e8a742c36f079 450 SMART SM01009 190 305 4.2E-33 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal D172_018705 cf14f4f74f6b9adef99e8a742c36f079 450 SMART SM00342 96 179 3.2E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_018705 cf14f4f74f6b9adef99e8a742c36f079 450 Gene3D G3DSA:3.30.310.20 190 305 7.3E-27 T 14-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily D172_018705 cf14f4f74f6b9adef99e8a742c36f079 450 Gene3D G3DSA:3.40.10.10 4 71 2.4E-26 T 14-10-2018 IPR035451 Ada-like domain superfamily D172_018705 cf14f4f74f6b9adef99e8a742c36f079 450 Gene3D G3DSA:1.10.340.30 306 408 1.0E-17 T 14-10-2018 D172_018705 cf14f4f74f6b9adef99e8a742c36f079 450 Pfam PF12833 Helix-turn-helix domain 102 179 2.1E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_018705 cf14f4f74f6b9adef99e8a742c36f079 450 Gene3D G3DSA:1.10.10.60 78 185 3.1E-19 T 14-10-2018 D172_018705 cf14f4f74f6b9adef99e8a742c36f079 450 Pfam PF06029 AlkA N-terminal domain 190 305 1.8E-37 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal D172_018705 cf14f4f74f6b9adef99e8a742c36f079 450 SUPERFAMILY SSF55945 190 286 1.33E-26 T 14-10-2018 D172_001555 3c12a338766a08adbbec7442b398bf49 299 Gene3D G3DSA:3.40.50.620 4 209 2.2E-66 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_001555 3c12a338766a08adbbec7442b398bf49 299 SUPERFAMILY SSF52402 3 206 7.15E-74 T 14-10-2018 D172_001555 3c12a338766a08adbbec7442b398bf49 299 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 26 254 5.5E-64 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 D172_001555 3c12a338766a08adbbec7442b398bf49 299 PIRSF PIRSF002936 1 299 1.7E-156 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 D172_001555 3c12a338766a08adbbec7442b398bf49 299 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 6 299 9.3E-161 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 D172_001555 3c12a338766a08adbbec7442b398bf49 299 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 1 299 57.825 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 D172_009860 119a5c4f8ba123c19797b80a3f869919 181 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 17 176 3.1E-48 T 14-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria D172_009860 119a5c4f8ba123c19797b80a3f869919 181 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 181 64.723 T 14-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria D172_009860 119a5c4f8ba123c19797b80a3f869919 181 Pfam PF03350 Uncharacterized protein family, UPF0114 24 140 2.3E-33 T 14-10-2018 IPR005134 Uncharacterised protein family UPF0114 D172_002770 f7c0cfdb5078300c51d0d95af616e57c 208 SUPERFAMILY SSF55811 10 203 2.71E-34 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D172_002770 f7c0cfdb5078300c51d0d95af616e57c 208 Pfam PF00293 NUDIX domain 54 176 1.1E-6 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D172_002770 f7c0cfdb5078300c51d0d95af616e57c 208 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 21 198 5.7E-47 T 14-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 D172_002770 f7c0cfdb5078300c51d0d95af616e57c 208 Gene3D G3DSA:3.90.79.10 2 208 3.0E-53 T 14-10-2018 D172_014595 5fe3ad5a671687a00ca50927a12239d3 148 Pfam PF07681 DoxX 16 102 1.4E-20 T 14-10-2018 IPR032808 DoxX family D172_009085 e3e29a2a15e4e8255a98293baf8cf242 236 Pfam PF06149 Protein of unknown function (DUF969) 6 222 4.6E-85 T 14-10-2018 IPR010374 Protein of unknown function DUF969 D172_011605 93ec105211f1595715cf2c6bfdfa3443 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 72 3.9E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_011605 93ec105211f1595715cf2c6bfdfa3443 246 SMART SM00345 13 72 1.2E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_011605 93ec105211f1595715cf2c6bfdfa3443 246 Gene3D G3DSA:1.10.10.10 3 80 8.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_011605 93ec105211f1595715cf2c6bfdfa3443 246 SMART SM00895 89 211 1.7E-19 T 14-10-2018 IPR011711 GntR, C-terminal D172_011605 93ec105211f1595715cf2c6bfdfa3443 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.3E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_011605 93ec105211f1595715cf2c6bfdfa3443 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.3E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_011605 93ec105211f1595715cf2c6bfdfa3443 246 Pfam PF07729 FCD domain 89 210 1.0E-20 T 14-10-2018 IPR011711 GntR, C-terminal D172_011605 93ec105211f1595715cf2c6bfdfa3443 246 SUPERFAMILY SSF48008 87 219 5.49E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_011605 93ec105211f1595715cf2c6bfdfa3443 246 Gene3D G3DSA:1.20.120.530 86 233 1.7E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_011605 93ec105211f1595715cf2c6bfdfa3443 246 SUPERFAMILY SSF46785 4 76 1.44E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_007935 8bf1c3dc56476c5e50572966d7619009 205 SUPERFAMILY SSF144091 3 196 2.62E-26 T 14-10-2018 D172_007935 8bf1c3dc56476c5e50572966d7619009 205 Pfam PF01694 Rhomboid family 53 191 4.0E-16 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 D172_007935 8bf1c3dc56476c5e50572966d7619009 205 Gene3D G3DSA:1.20.1540.10 5 191 4.6E-21 T 14-10-2018 IPR035952 Rhomboid-like superfamily D172_011600 7901562986ff40ee28449f3154ec318d 155 Pfam PF02566 OsmC-like protein 55 153 9.9E-17 T 14-10-2018 IPR003718 OsmC/Ohr family D172_011600 7901562986ff40ee28449f3154ec318d 155 SUPERFAMILY SSF82784 1 153 7.85E-49 T 14-10-2018 IPR036102 OsmC/Ohr superfamily D172_011600 7901562986ff40ee28449f3154ec318d 155 Gene3D G3DSA:3.30.300.20 1 154 2.1E-50 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta D172_000770 b209494fd62b2c420bebe58504b600af 218 SUPERFAMILY SSF53474 8 217 6.0E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_000770 b209494fd62b2c420bebe58504b600af 218 Gene3D G3DSA:3.40.50.1820 3 218 8.7E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_000770 b209494fd62b2c420bebe58504b600af 218 Pfam PF02230 Phospholipase/Carboxylesterase 6 213 2.1E-57 T 14-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 D172_001105 eb6d1a8881ce97b9dced7c0afc7ff89c 565 SUPERFAMILY SSF56014 144 338 8.37E-57 T 14-10-2018 D172_001105 eb6d1a8881ce97b9dced7c0afc7ff89c 565 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 347 410 1.3E-12 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_001105 eb6d1a8881ce97b9dced7c0afc7ff89c 565 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 74 133 8.6E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_001105 eb6d1a8881ce97b9dced7c0afc7ff89c 565 Gene3D G3DSA:3.30.413.10 420 562 1.4E-33 T 14-10-2018 D172_001105 eb6d1a8881ce97b9dced7c0afc7ff89c 565 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 14 553 1.6E-272 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_001105 eb6d1a8881ce97b9dced7c0afc7ff89c 565 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 168 323 1.1E-44 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_001105 eb6d1a8881ce97b9dced7c0afc7ff89c 565 SUPERFAMILY SSF55124 7 140 9.65E-27 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_001105 eb6d1a8881ce97b9dced7c0afc7ff89c 565 SUPERFAMILY SSF56014 423 562 5.63E-33 T 14-10-2018 D172_001105 eb6d1a8881ce97b9dced7c0afc7ff89c 565 SUPERFAMILY SSF55124 340 416 2.62E-19 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_001105 eb6d1a8881ce97b9dced7c0afc7ff89c 565 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 425 551 0.73 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_001105 eb6d1a8881ce97b9dced7c0afc7ff89c 565 PRINTS PR00397 Sirohaem Fe-binding site signature 472 490 1.4E-7 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_001105 eb6d1a8881ce97b9dced7c0afc7ff89c 565 PRINTS PR00397 Sirohaem Fe-binding site signature 424 442 1.4E-7 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_001105 eb6d1a8881ce97b9dced7c0afc7ff89c 565 Gene3D G3DSA:3.90.480.10 76 163 1.8E-23 T 14-10-2018 D172_001105 eb6d1a8881ce97b9dced7c0afc7ff89c 565 Gene3D G3DSA:3.90.480.10 332 418 2.6E-28 T 14-10-2018 D172_001105 eb6d1a8881ce97b9dced7c0afc7ff89c 565 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 3 565 57.552 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 D172_001105 eb6d1a8881ce97b9dced7c0afc7ff89c 565 Gene3D G3DSA:3.30.413.10 189 331 2.6E-45 T 14-10-2018 D172_000535 36290d1b632efcda9ba0c95ef80ff04d 282 PIRSF PIRSF016020 1 282 4.7E-60 T 14-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 D172_000535 36290d1b632efcda9ba0c95ef80ff04d 282 Pfam PF01263 Aldose 1-epimerase 21 280 6.2E-44 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 D172_000535 36290d1b632efcda9ba0c95ef80ff04d 282 SUPERFAMILY SSF74650 14 280 6.91E-64 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 D172_000535 36290d1b632efcda9ba0c95ef80ff04d 282 Gene3D G3DSA:2.70.98.10 2 282 2.3E-78 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 D172_015340 9725cfdab7185aa14dac2432ce11fb4a 370 Gene3D G3DSA:1.20.5.70 343 368 3.9E-6 T 14-10-2018 D172_015340 9725cfdab7185aa14dac2432ce11fb4a 370 Pfam PF10531 SLBB domain 171 216 8.8E-13 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_015340 9725cfdab7185aa14dac2432ce11fb4a 370 Pfam PF10531 SLBB domain 254 303 2.3E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_015340 9725cfdab7185aa14dac2432ce11fb4a 370 Gene3D G3DSA:3.10.560.10 63 252 7.5E-103 T 14-10-2018 D172_015340 9725cfdab7185aa14dac2432ce11fb4a 370 Gene3D G3DSA:3.10.560.10 55 340 7.5E-103 T 14-10-2018 D172_015340 9725cfdab7185aa14dac2432ce11fb4a 370 Gene3D G3DSA:3.30.1950.10 86 167 7.5E-103 T 14-10-2018 D172_015340 9725cfdab7185aa14dac2432ce11fb4a 370 Pfam PF02563 Polysaccharide biosynthesis/export protein 79 163 3.6E-24 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 D172_007900 71f3cd519ebb784f11f35c4933523581 373 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 D172_007900 71f3cd519ebb784f11f35c4933523581 373 PIRSF PIRSF000183 1 371 3.8E-154 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 D172_007900 71f3cd519ebb784f11f35c4933523581 373 SUPERFAMILY SSF52283 1 360 1.11E-68 T 14-10-2018 D172_007900 71f3cd519ebb784f11f35c4933523581 373 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 5.5E-47 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal D172_007900 71f3cd519ebb784f11f35c4933523581 373 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 353 5.7E-81 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain D172_007900 71f3cd519ebb784f11f35c4933523581 373 SUPERFAMILY SSF51735 137 303 9.11E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_007900 71f3cd519ebb784f11f35c4933523581 373 SMART SM01003 4 137 7.1E-79 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal D172_007900 71f3cd519ebb784f11f35c4933523581 373 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 369 2.0E-153 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 D172_007900 71f3cd519ebb784f11f35c4933523581 373 Gene3D G3DSA:3.40.50.720 130 305 3.8E-135 T 14-10-2018 D172_007900 71f3cd519ebb784f11f35c4933523581 373 Gene3D G3DSA:3.40.50.720 3 353 3.8E-135 T 14-10-2018 D172_007900 71f3cd519ebb784f11f35c4933523581 373 SMART SM01002 149 297 1.1E-84 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain D172_008950 98b65b5f91be2cc0bdc3730bf55bdbef 160 SUPERFAMILY SSF55729 1 136 9.41E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_008950 98b65b5f91be2cc0bdc3730bf55bdbef 160 Gene3D G3DSA:3.40.630.30 1 151 1.2E-19 T 14-10-2018 D172_008950 98b65b5f91be2cc0bdc3730bf55bdbef 160 Pfam PF13673 Acetyltransferase (GNAT) domain 42 136 2.2E-10 T 14-10-2018 IPR000182 GNAT domain D172_000465 309835137dc822e6ab2e38f471131872 529 SMART SM00098 58 527 2.1E-139 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_000465 309835137dc822e6ab2e38f471131872 529 SUPERFAMILY SSF53649 34 526 1.55E-148 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D172_000465 309835137dc822e6ab2e38f471131872 529 Gene3D G3DSA:3.40.720.10 25 529 1.1E-176 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D172_000465 309835137dc822e6ab2e38f471131872 529 Pfam PF00245 Alkaline phosphatase 57 526 5.7E-119 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_000465 309835137dc822e6ab2e38f471131872 529 PRINTS PR00113 Alkaline phosphatase signature 113 128 5.0E-41 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_000465 309835137dc822e6ab2e38f471131872 529 PRINTS PR00113 Alkaline phosphatase signature 160 180 5.0E-41 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_000465 309835137dc822e6ab2e38f471131872 529 PRINTS PR00113 Alkaline phosphatase signature 57 77 5.0E-41 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_000465 309835137dc822e6ab2e38f471131872 529 PRINTS PR00113 Alkaline phosphatase signature 324 353 5.0E-41 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_007245 b4a274b22c6fab24405d15bf6b31af7d 287 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 33 271 4.5E-85 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D172_007245 b4a274b22c6fab24405d15bf6b31af7d 287 Gene3D G3DSA:3.30.950.10 149 283 5.9E-38 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 D172_007245 b4a274b22c6fab24405d15bf6b31af7d 287 Gene3D G3DSA:3.40.1010.10 31 148 1.9E-40 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 D172_007245 b4a274b22c6fab24405d15bf6b31af7d 287 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 38 52 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 D172_007245 b4a274b22c6fab24405d15bf6b31af7d 287 SUPERFAMILY SSF53790 29 271 7.72E-68 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 D172_007245 b4a274b22c6fab24405d15bf6b31af7d 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 35 246 1.1E-46 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 D172_004775 8092c32e85a499dce30159bb609a31ef 201 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 35 200 1.7E-42 T 14-10-2018 IPR016476 SH3 domain protein D172_004775 8092c32e85a499dce30159bb609a31ef 201 SMART SM00287 31 96 1.1E-9 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type D172_004775 8092c32e85a499dce30159bb609a31ef 201 PIRSF PIRSF006158 4 201 2.0E-53 T 14-10-2018 IPR016476 SH3 domain protein D172_004775 8092c32e85a499dce30159bb609a31ef 201 Gene3D G3DSA:2.30.30.40 24 96 2.1E-10 T 14-10-2018 D172_004775 8092c32e85a499dce30159bb609a31ef 201 Pfam PF08239 Bacterial SH3 domain 43 92 9.2E-11 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type D172_006935 1c2d09e2e278fe3547bfe25c1e634281 295 Gene3D G3DSA:3.40.190.10 91 287 1.3E-50 T 14-10-2018 D172_006935 1c2d09e2e278fe3547bfe25c1e634281 295 Gene3D G3DSA:3.40.190.10 163 262 1.3E-50 T 14-10-2018 D172_006935 1c2d09e2e278fe3547bfe25c1e634281 295 Gene3D G3DSA:1.10.10.10 2 89 5.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_006935 1c2d09e2e278fe3547bfe25c1e634281 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.2E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_006935 1c2d09e2e278fe3547bfe25c1e634281 295 SUPERFAMILY SSF46785 2 112 3.99E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_006935 1c2d09e2e278fe3547bfe25c1e634281 295 SUPERFAMILY SSF53850 89 290 1.47E-33 T 14-10-2018 D172_006935 1c2d09e2e278fe3547bfe25c1e634281 295 Pfam PF03466 LysR substrate binding domain 89 289 4.6E-30 T 14-10-2018 IPR005119 LysR, substrate-binding D172_006105 73cce76217aaff27189d70ca56dfc968 149 Pfam PF00258 Flavodoxin 6 128 4.2E-17 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 D172_006105 73cce76217aaff27189d70ca56dfc968 149 SUPERFAMILY SSF52218 1 147 4.01E-35 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_006105 73cce76217aaff27189d70ca56dfc968 149 Gene3D G3DSA:3.40.50.360 1 148 2.8E-40 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_008065 83fd79935c10a8f58707b22085097c27 134 SUPERFAMILY SSF51316 1 132 1.01E-42 T 14-10-2018 IPR011057 Mss4-like superfamily D172_008065 83fd79935c10a8f58707b22085097c27 134 Gene3D G3DSA:2.170.150.70 2 118 2.6E-21 T 14-10-2018 D172_008065 83fd79935c10a8f58707b22085097c27 134 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 100 2.1E-19 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 D172_000520 097154339ab971a814fe72e6d6a8c381 131 Pfam PF04304 Protein of unknown function (DUF454) 15 125 1.8E-33 T 14-10-2018 IPR007401 Protein of unknown function DUF454 D172_000520 097154339ab971a814fe72e6d6a8c381 131 PIRSF PIRSF016789 11 131 1.5E-31 T 14-10-2018 IPR007401 Protein of unknown function DUF454 D172_008745 717acf126a604878fee984da42e08b4f 450 Pfam PF10011 Predicted membrane protein (DUF2254) 16 383 5.7E-97 T 14-10-2018 IPR018723 Protein of unknown function DUF2254, membrane D172_014785 8a868d116a25d91bdd0d7a893c58ec01 622 Pfam PF05257 CHAP domain 50 147 1.8E-15 T 14-10-2018 IPR007921 CHAP domain D172_014785 8a868d116a25d91bdd0d7a893c58ec01 622 SUPERFAMILY SSF52440 383 515 2.85E-36 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily D172_014785 8a868d116a25d91bdd0d7a893c58ec01 622 SUPERFAMILY SSF54001 9 195 2.94E-60 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily D172_014785 8a868d116a25d91bdd0d7a893c58ec01 622 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 251 615 9.2E-69 T 14-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain D172_014785 8a868d116a25d91bdd0d7a893c58ec01 622 SUPERFAMILY SSF56059 216 619 3.88E-75 T 14-10-2018 D172_014785 8a868d116a25d91bdd0d7a893c58ec01 622 Gene3D G3DSA:3.90.1720.10 2 196 2.3E-62 T 14-10-2018 D172_014785 8a868d116a25d91bdd0d7a893c58ec01 622 Gene3D G3DSA:3.30.1490.330 499 580 1.9E-30 T 14-10-2018 D172_000835 8cf6c37043076e34c27566e727157221 313 Pfam PF08238 Sel1 repeat 264 295 8.4E-9 T 14-10-2018 IPR006597 Sel1-like repeat D172_000835 8cf6c37043076e34c27566e727157221 313 Pfam PF08238 Sel1 repeat 224 241 210.0 T 14-10-2018 IPR006597 Sel1-like repeat D172_000835 8cf6c37043076e34c27566e727157221 313 SMART SM00671 261 296 1.3E-7 T 14-10-2018 IPR006597 Sel1-like repeat D172_000835 8cf6c37043076e34c27566e727157221 313 SUPERFAMILY SSF81901 234 302 2.22E-15 T 14-10-2018 D172_000835 8cf6c37043076e34c27566e727157221 313 Gene3D G3DSA:1.25.40.10 228 309 1.3E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_011365 92e036e6c200e801c617bc1bd7f0bfd7 352 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 346 32.364 T 14-10-2018 IPR014524 Outer membrane protein assembly factor BamC D172_011365 92e036e6c200e801c617bc1bd7f0bfd7 352 Pfam PF06804 NlpB/DapX lipoprotein 34 345 3.9E-77 T 14-10-2018 IPR010653 NlpB/DapX lipoprotein D172_011365 92e036e6c200e801c617bc1bd7f0bfd7 352 Gene3D G3DSA:3.30.310.170 226 350 2.1E-21 T 14-10-2018 D172_016220 03ba83680af5aa8eeef2d50b5777b3f5 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 19.579 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 D172_016220 03ba83680af5aa8eeef2d50b5777b3f5 144 Gene3D G3DSA:3.100.10.10 70 144 4.1E-15 T 14-10-2018 D172_016220 03ba83680af5aa8eeef2d50b5777b3f5 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 143 8.5E-49 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_016220 03ba83680af5aa8eeef2d50b5777b3f5 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 6.8E-32 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P D172_016220 03ba83680af5aa8eeef2d50b5777b3f5 144 SUPERFAMILY SSF52080 4 143 1.7E-47 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily D172_015995 2776cebfe3ef8d38dc78845a6cda627d 691 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 479 491 4.4E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 D172_015995 2776cebfe3ef8d38dc78845a6cda627d 691 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 589 600 4.4E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 D172_015995 2776cebfe3ef8d38dc78845a6cda627d 691 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 497 509 4.4E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 D172_015995 2776cebfe3ef8d38dc78845a6cda627d 691 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 518 534 4.4E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 D172_015995 2776cebfe3ef8d38dc78845a6cda627d 691 Pfam PF01431 Peptidase family M13 487 688 7.1E-79 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 D172_015995 2776cebfe3ef8d38dc78845a6cda627d 691 Gene3D G3DSA:1.10.1380.10 84 474 4.2E-252 T 14-10-2018 D172_015995 2776cebfe3ef8d38dc78845a6cda627d 691 Gene3D G3DSA:3.40.390.10 53 691 4.2E-252 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 D172_015995 2776cebfe3ef8d38dc78845a6cda627d 691 Pfam PF05649 Peptidase family M13 59 435 7.4E-107 T 14-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 D172_015995 2776cebfe3ef8d38dc78845a6cda627d 691 SUPERFAMILY SSF55486 48 691 4.54E-225 T 14-10-2018 D172_001725 b88186ded90473d058a6b580cc75bca9 296 Pfam PF01715 IPP transferase 31 277 1.4E-85 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 D172_001725 b88186ded90473d058a6b580cc75bca9 296 Gene3D G3DSA:1.10.20.140 104 175 1.7E-105 T 14-10-2018 D172_001725 b88186ded90473d058a6b580cc75bca9 296 SUPERFAMILY SSF52540 1 149 2.55E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_001725 b88186ded90473d058a6b580cc75bca9 296 Gene3D G3DSA:3.40.50.300 1 280 1.7E-105 T 14-10-2018 D172_001725 b88186ded90473d058a6b580cc75bca9 296 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 1 293 27.951 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 D172_001725 b88186ded90473d058a6b580cc75bca9 296 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 1 283 2.7E-107 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 D172_004195 705ac9cb885992e65e601e73edce9a01 279 Gene3D G3DSA:1.10.3210.10 1 279 2.8E-60 T 14-10-2018 D172_004195 705ac9cb885992e65e601e73edce9a01 279 SUPERFAMILY SSF109604 12 245 4.24E-49 T 14-10-2018 D172_004195 705ac9cb885992e65e601e73edce9a01 279 Pfam PF08668 HDOD domain 22 209 3.9E-37 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD D172_020660 258ac825f150964d43c23ce5f4357db8 215 SUPERFAMILY SSF48452 62 177 9.29E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_020660 258ac825f150964d43c23ce5f4357db8 215 Gene3D G3DSA:1.25.40.10 36 208 2.7E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_017930 f34bf643b71c98d4707a9f47ba3ac7cc 274 Pfam PF01925 Sulfite exporter TauE/SafE 14 267 4.7E-45 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 D172_005715 6647fa6079c34277f33f7f8ce36c2917 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 2.1E-29 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal D172_005715 6647fa6079c34277f33f7f8ce36c2917 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 3.3E-45 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D172_005715 6647fa6079c34277f33f7f8ce36c2917 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site D172_005715 6647fa6079c34277f33f7f8ce36c2917 403 SUPERFAMILY SSF53901 1 251 2.03E-64 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_005715 6647fa6079c34277f33f7f8ce36c2917 403 SMART SM00825 Beta-ketoacyl synthase 4 403 2.2E-13 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D172_005715 6647fa6079c34277f33f7f8ce36c2917 403 SUPERFAMILY SSF53901 213 401 1.15E-61 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_005715 6647fa6079c34277f33f7f8ce36c2917 403 Gene3D G3DSA:3.40.47.10 1 252 1.1E-65 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_005715 6647fa6079c34277f33f7f8ce36c2917 403 Gene3D G3DSA:3.40.47.10 258 401 7.7E-49 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_002475 cf4511be06db8c41ac6c0430518b99d2 235 SUPERFAMILY SSF46689 187 235 1.21E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_002475 cf4511be06db8c41ac6c0430518b99d2 235 SMART SM00342 151 234 3.5E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_002475 cf4511be06db8c41ac6c0430518b99d2 235 SUPERFAMILY SSF51182 16 71 2.11E-5 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily D172_002475 cf4511be06db8c41ac6c0430518b99d2 235 SUPERFAMILY SSF46689 134 185 2.96E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_002475 cf4511be06db8c41ac6c0430518b99d2 235 Pfam PF12833 Helix-turn-helix domain 157 235 2.5E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_002475 cf4511be06db8c41ac6c0430518b99d2 235 Gene3D G3DSA:2.60.120.10 9 73 3.6E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_002475 cf4511be06db8c41ac6c0430518b99d2 235 Gene3D G3DSA:1.10.10.60 185 235 5.4E-15 T 14-10-2018 D172_002475 cf4511be06db8c41ac6c0430518b99d2 235 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 188 230 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D172_002475 cf4511be06db8c41ac6c0430518b99d2 235 Gene3D G3DSA:1.10.10.60 132 184 1.8E-12 T 14-10-2018 D172_000725 da42cd5e7486f4380e7822a2447852ea 118 Pfam PF08888 HopJ type III effector protein 4 115 8.4E-44 T 14-10-2018 IPR014984 HopJ type III effector protein D172_000725 da42cd5e7486f4380e7822a2447852ea 118 Gene3D G3DSA:3.20.160.10 1 118 2.7E-41 T 14-10-2018 IPR038604 Type III effector HopJ superfamily D172_016250 f445d424b29d1b36d6b18943d84ecbd7 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 2.0E-28 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_016250 f445d424b29d1b36d6b18943d84ecbd7 101 Gene3D G3DSA:4.10.830.10 42 101 5.3E-25 T 14-10-2018 D172_016250 f445d424b29d1b36d6b18943d84ecbd7 101 SUPERFAMILY SSF57716 2 101 2.42E-38 T 14-10-2018 D172_016250 f445d424b29d1b36d6b18943d84ecbd7 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016250 f445d424b29d1b36d6b18943d84ecbd7 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.55 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid D172_008510 4ca9e91783a76259b73e29ecabf870c3 465 SUPERFAMILY SSF50249 14 101 2.79E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_008510 4ca9e91783a76259b73e29ecabf870c3 465 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 1.9E-10 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 D172_008510 4ca9e91783a76259b73e29ecabf870c3 465 SUPERFAMILY SSF55681 96 463 2.79E-99 T 14-10-2018 D172_008510 4ca9e91783a76259b73e29ecabf870c3 465 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 464 3.1E-207 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 D172_008510 4ca9e91783a76259b73e29ecabf870c3 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 380 396 8.4E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_008510 4ca9e91783a76259b73e29ecabf870c3 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 219 8.4E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_008510 4ca9e91783a76259b73e29ecabf870c3 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 223 236 8.4E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_008510 4ca9e91783a76259b73e29ecabf870c3 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 420 434 8.4E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_008510 4ca9e91783a76259b73e29ecabf870c3 465 Gene3D G3DSA:2.40.50.140 2 103 1.5E-19 T 14-10-2018 D172_008510 4ca9e91783a76259b73e29ecabf870c3 465 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 465 45.884 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 D172_008510 4ca9e91783a76259b73e29ecabf870c3 465 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 460 9.6E-87 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_008510 4ca9e91783a76259b73e29ecabf870c3 465 Gene3D G3DSA:3.30.930.10 108 464 2.2E-113 T 14-10-2018 D172_010955 36eb2942187cbcef0883c17c9c7be296 437 Pfam PF02687 FtsX-like permease family 341 430 6.2E-15 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 D172_010955 36eb2942187cbcef0883c17c9c7be296 437 Pfam PF12704 MacB-like periplasmic core domain 20 218 4.2E-19 T 14-10-2018 IPR025857 MacB-like periplasmic core domain D172_001540 8a2f711be6284bd114f50f893976a827 197 SUPERFAMILY SSF52540 22 193 2.92E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_001540 8a2f711be6284bd114f50f893976a827 197 Pfam PF01583 Adenylylsulphate kinase 25 178 2.9E-75 T 14-10-2018 D172_001540 8a2f711be6284bd114f50f893976a827 197 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 23 195 39.996 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 D172_001540 8a2f711be6284bd114f50f893976a827 197 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 7 191 2.1E-86 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 D172_001540 8a2f711be6284bd114f50f893976a827 197 Gene3D G3DSA:3.40.50.300 1 197 1.5E-82 T 14-10-2018 D172_000585 9b2088d240bb56dc378ff8e65ee7b950 150 Gene3D G3DSA:1.20.120.10 24 150 1.8E-36 T 14-10-2018 D172_000585 9b2088d240bb56dc378ff8e65ee7b950 150 SUPERFAMILY SSF47175 25 149 2.8E-37 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 D172_000585 9b2088d240bb56dc378ff8e65ee7b950 150 Pfam PF01322 Cytochrome C' 30 149 1.7E-35 T 14-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 D172_000585 9b2088d240bb56dc378ff8e65ee7b950 150 PIRSF PIRSF000027 6 150 8.7E-40 T 14-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 D172_015015 d3a29e221c5d0bb5885ca3c3f12fe0b1 293 SUPERFAMILY SSF53850 90 290 1.18E-27 T 14-10-2018 D172_015015 d3a29e221c5d0bb5885ca3c3f12fe0b1 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.8E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_015015 d3a29e221c5d0bb5885ca3c3f12fe0b1 293 Gene3D G3DSA:1.10.10.10 5 95 2.1E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_015015 d3a29e221c5d0bb5885ca3c3f12fe0b1 293 SUPERFAMILY SSF46785 5 114 2.04E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_015015 d3a29e221c5d0bb5885ca3c3f12fe0b1 293 Pfam PF03466 LysR substrate binding domain 90 287 2.3E-27 T 14-10-2018 IPR005119 LysR, substrate-binding D172_015015 d3a29e221c5d0bb5885ca3c3f12fe0b1 293 Gene3D G3DSA:3.40.190.290 96 285 1.9E-25 T 14-10-2018 D172_008165 8cb4820106e6cc82006d8211798b4007 289 Gene3D G3DSA:2.40.50.40 173 245 1.0E-10 T 14-10-2018 D172_008165 8cb4820106e6cc82006d8211798b4007 289 Pfam PF04397 LytTr DNA-binding domain 185 282 2.9E-14 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 D172_008165 8cb4820106e6cc82006d8211798b4007 289 SMART SM00850 181 283 5.1E-15 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 D172_001395 5baaf0aba31b335820ad550fc25c74fa 272 Gene3D G3DSA:3.40.50.720 1 266 1.2E-49 T 14-10-2018 D172_001395 5baaf0aba31b335820ad550fc25c74fa 272 Pfam PF00106 short chain dehydrogenase 3 198 1.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001395 5baaf0aba31b335820ad550fc25c74fa 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.9E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001395 5baaf0aba31b335820ad550fc25c74fa 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.9E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001395 5baaf0aba31b335820ad550fc25c74fa 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.9E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001395 5baaf0aba31b335820ad550fc25c74fa 272 SUPERFAMILY SSF51735 2 242 1.46E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_001395 5baaf0aba31b335820ad550fc25c74fa 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 5.8E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001395 5baaf0aba31b335820ad550fc25c74fa 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.8E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001395 5baaf0aba31b335820ad550fc25c74fa 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.8E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001395 5baaf0aba31b335820ad550fc25c74fa 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.8E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_005250 f55c82f07f26068ad6e720b5047cb0f6 307 Gene3D G3DSA:1.10.10.10 7 95 1.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_005250 f55c82f07f26068ad6e720b5047cb0f6 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_005250 f55c82f07f26068ad6e720b5047cb0f6 307 Pfam PF03466 LysR substrate binding domain 92 293 3.0E-37 T 14-10-2018 IPR005119 LysR, substrate-binding D172_005250 f55c82f07f26068ad6e720b5047cb0f6 307 Gene3D G3DSA:3.40.190.10 96 291 3.5E-51 T 14-10-2018 D172_005250 f55c82f07f26068ad6e720b5047cb0f6 307 Gene3D G3DSA:3.40.190.10 167 265 3.5E-51 T 14-10-2018 D172_005250 f55c82f07f26068ad6e720b5047cb0f6 307 SUPERFAMILY SSF46785 8 116 1.09E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_005250 f55c82f07f26068ad6e720b5047cb0f6 307 SUPERFAMILY SSF53850 93 294 5.27E-40 T 14-10-2018 D172_015315 389dbddcb206fd4b68312f06a09b9150 539 SUPERFAMILY SSF51430 229 527 6.42E-42 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily D172_015315 389dbddcb206fd4b68312f06a09b9150 539 Pfam PF00248 Aldo/keto reductase family 245 522 3.7E-33 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain D172_015315 389dbddcb206fd4b68312f06a09b9150 539 Pfam PF02348 Cytidylyltransferase 7 171 2.8E-19 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 D172_015315 389dbddcb206fd4b68312f06a09b9150 539 SUPERFAMILY SSF53448 1 138 6.76E-17 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_015315 389dbddcb206fd4b68312f06a09b9150 539 Gene3D G3DSA:3.90.550.10 2 210 2.3E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_015315 389dbddcb206fd4b68312f06a09b9150 539 Gene3D G3DSA:3.20.20.100 223 524 7.8E-45 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily D172_001365 f70b358aa07bab5a3b6efce82556efe2 499 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 489 3.1E-209 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 D172_001365 f70b358aa07bab5a3b6efce82556efe2 499 Gene3D G3DSA:3.30.420.40 252 497 9.6E-78 T 14-10-2018 D172_001365 f70b358aa07bab5a3b6efce82556efe2 499 SUPERFAMILY SSF53067 253 488 7.45E-71 T 14-10-2018 D172_001365 f70b358aa07bab5a3b6efce82556efe2 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 447 4.2E-49 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 D172_001365 f70b358aa07bab5a3b6efce82556efe2 499 PIRSF PIRSF000538 2 496 2.2E-166 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 D172_001365 f70b358aa07bab5a3b6efce82556efe2 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 250 2.8E-79 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 D172_001365 f70b358aa07bab5a3b6efce82556efe2 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 D172_001365 f70b358aa07bab5a3b6efce82556efe2 499 Hamap MF_00186 Glycerol kinase [glpK]. 2 494 52.746 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 D172_001365 f70b358aa07bab5a3b6efce82556efe2 499 Gene3D G3DSA:3.30.420.40 1 251 1.9E-105 T 14-10-2018 D172_001365 f70b358aa07bab5a3b6efce82556efe2 499 SUPERFAMILY SSF53067 3 253 2.29E-94 T 14-10-2018 D172_004625 97973dbce31a791ec568bc705dac7281 254 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 233 2.1E-71 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 D172_004625 97973dbce31a791ec568bc705dac7281 254 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 250 39.307 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 D172_004625 97973dbce31a791ec568bc705dac7281 254 SUPERFAMILY SSF64167 1 249 3.66E-86 T 14-10-2018 D172_004625 97973dbce31a791ec568bc705dac7281 254 Pfam PF01975 Survival protein SurE 3 182 6.8E-59 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 D172_004625 97973dbce31a791ec568bc705dac7281 254 Gene3D G3DSA:3.40.1210.10 1 250 1.3E-93 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 SUPERFAMILY SSF50447 559 641 4.2E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 311 361 1.3E-13 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 Gene3D G3DSA:3.40.50.300 384 557 3.1E-69 T 14-10-2018 D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 SUPERFAMILY SSF52156 664 793 2.35E-37 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 98 4.0E-14 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 390 545 1.1E-31 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 SUPERFAMILY SSF50447 788 884 9.77E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 SUPERFAMILY SSF52540 383 551 5.7E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 Pfam PF00009 Elongation factor Tu GTP binding domain 390 546 1.1E-33 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 Gene3D G3DSA:2.40.30.10 788 885 2.6E-33 T 14-10-2018 D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 Gene3D G3DSA:3.40.50.10050 680 787 8.0E-37 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 ProSitePatterns PS01176 Initiation factor 2 signature. 837 859 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 303 886 3.0E-276 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 SUPERFAMILY SSF46955 3 49 1.5E-10 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 Pfam PF11987 Translation-initiation factor 2 671 776 6.0E-36 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 884 17.32 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 Gene3D G3DSA:2.40.30.10 558 676 1.2E-39 T 14-10-2018 D172_012415 03911fae2f201f3b85fc7cb9b96cc327 886 Gene3D G3DSA:3.30.56.50 2 50 2.0E-22 T 14-10-2018 D172_003740 903afad6013066a2f6ac4f386700bba2 395 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 6 387 6.1E-130 T 14-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 D172_003740 903afad6013066a2f6ac4f386700bba2 395 Pfam PF01494 FAD binding domain 5 335 5.0E-21 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 D172_003740 903afad6013066a2f6ac4f386700bba2 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 8.6E-14 T 14-10-2018 D172_003740 903afad6013066a2f6ac4f386700bba2 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 8.6E-14 T 14-10-2018 D172_003740 903afad6013066a2f6ac4f386700bba2 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 8.6E-14 T 14-10-2018 D172_003740 903afad6013066a2f6ac4f386700bba2 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 8.6E-14 T 14-10-2018 D172_003740 903afad6013066a2f6ac4f386700bba2 395 Gene3D G3DSA:3.50.50.60 6 335 6.9E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_003740 903afad6013066a2f6ac4f386700bba2 395 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 D172_003740 903afad6013066a2f6ac4f386700bba2 395 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 387 1.9E-116 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 D172_003740 903afad6013066a2f6ac4f386700bba2 395 Gene3D G3DSA:3.30.9.50 81 269 6.9E-91 T 14-10-2018 D172_003740 903afad6013066a2f6ac4f386700bba2 395 SUPERFAMILY SSF51905 4 380 5.0E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_011560 255fa45a24d5e8ee8f9b60012bbba0e4 176 Pfam PF13476 AAA domain 16 164 7.2E-9 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain D172_011560 255fa45a24d5e8ee8f9b60012bbba0e4 176 Gene3D G3DSA:3.40.50.300 5 170 1.9E-9 T 14-10-2018 D172_008230 4b9c39c2acd70091df4e3d723ec7c547 331 SUPERFAMILY SSF50939 34 297 1.39E-29 T 14-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 D172_008230 4b9c39c2acd70091df4e3d723ec7c547 331 Pfam PF14870 Photosynthesis system II assembly factor YCF48 108 186 3.2E-8 T 14-10-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain D172_008230 4b9c39c2acd70091df4e3d723ec7c547 331 Gene3D G3DSA:2.130.10.10 12 253 3.0E-13 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_001190 19b6242ffc04fd4398009c2a1d4a8225 218 Pfam PF11172 Protein of unknown function (DUF2959) 17 214 3.1E-88 T 14-10-2018 IPR021342 Protein of unknown function DUF2959 D172_011900 1c08e2187376d37497a868bd1d9a338a 284 Gene3D G3DSA:3.20.20.70 2 280 9.6E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_011900 1c08e2187376d37497a868bd1d9a338a 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 272 3.9E-115 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D172_011900 1c08e2187376d37497a868bd1d9a338a 284 Pfam PF00793 DAHP synthetase I family 10 272 8.4E-68 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D172_011900 1c08e2187376d37497a868bd1d9a338a 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 274 48.458 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D172_011900 1c08e2187376d37497a868bd1d9a338a 284 SUPERFAMILY SSF51569 3 275 3.39E-100 T 14-10-2018 D172_004790 4af4c016d0ac9c032c1ba828a54e0356 269 Gene3D G3DSA:3.40.190.10 23 235 6.4E-37 T 14-10-2018 D172_004790 4af4c016d0ac9c032c1ba828a54e0356 269 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 23 243 5.5E-47 T 14-10-2018 D172_004790 4af4c016d0ac9c032c1ba828a54e0356 269 Gene3D G3DSA:3.40.190.10 102 203 6.4E-37 T 14-10-2018 D172_004790 4af4c016d0ac9c032c1ba828a54e0356 269 SUPERFAMILY SSF53850 22 224 5.22E-19 T 14-10-2018 D172_000090 d93741891602ce852f9cc66f94e8d530 70 ProSitePatterns PS00018 EF-hand calcium-binding domain. 55 67 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_000090 d93741891602ce852f9cc66f94e8d530 70 Pfam PF13202 EF hand 24 40 0.0017 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_000090 d93741891602ce852f9cc66f94e8d530 70 Pfam PF13202 EF hand 49 68 5.6E-5 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_000090 d93741891602ce852f9cc66f94e8d530 70 SUPERFAMILY SSF47473 15 69 9.08E-9 T 14-10-2018 IPR011992 EF-hand domain pair D172_000090 d93741891602ce852f9cc66f94e8d530 70 Gene3D G3DSA:1.10.238.10 16 70 8.8E-10 T 14-10-2018 D172_006660 2033afa2953894dc5c0805dfb1368f82 308 TIGRFAM TIGR02794 tolA_full: protein TolA 4 306 4.8E-50 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 D172_006660 2033afa2953894dc5c0805dfb1368f82 308 Pfam PF06519 TolA C-terminal 211 303 4.0E-26 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 D172_006660 2033afa2953894dc5c0805dfb1368f82 308 Gene3D G3DSA:3.30.1150.10 209 307 3.8E-27 T 14-10-2018 D172_006660 2033afa2953894dc5c0805dfb1368f82 308 SUPERFAMILY SSF74653 220 307 1.37E-16 T 14-10-2018 D172_003255 68320ef456c458e9a854f7bfc87da826 256 PRINTS PR01399 Enterobactin synthetase component D signature 174 190 1.9E-9 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 D172_003255 68320ef456c458e9a854f7bfc87da826 256 PRINTS PR01399 Enterobactin synthetase component D signature 66 86 1.9E-9 T 14-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 D172_003255 68320ef456c458e9a854f7bfc87da826 256 SUPERFAMILY SSF56214 129 245 5.76E-10 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D172_003255 68320ef456c458e9a854f7bfc87da826 256 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 131 223 2.9E-8 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D172_008975 5a7ed774dc2a6d1b7a55468f77e9f97f 587 SUPERFAMILY SSF52540 3 338 1.28E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_008975 5a7ed774dc2a6d1b7a55468f77e9f97f 587 Pfam PF13175 AAA ATPase domain 3 67 2.0E-10 T 14-10-2018 D172_008975 5a7ed774dc2a6d1b7a55468f77e9f97f 587 Pfam PF13175 AAA ATPase domain 142 336 8.0E-20 T 14-10-2018 D172_008975 5a7ed774dc2a6d1b7a55468f77e9f97f 587 Gene3D G3DSA:3.40.50.300 3 357 8.6E-27 T 14-10-2018 D172_011595 a24cc524ecb5fa38846bf52d37389aa5 185 SUPERFAMILY SSF55729 1 179 8.18E-41 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_011595 a24cc524ecb5fa38846bf52d37389aa5 185 Gene3D G3DSA:3.40.630.30 3 185 9.1E-42 T 14-10-2018 D172_011595 a24cc524ecb5fa38846bf52d37389aa5 185 Pfam PF13302 Acetyltransferase (GNAT) domain 10 154 4.0E-24 T 14-10-2018 IPR000182 GNAT domain D172_009900 6b83659a0e0469e7d9619718139c2637 289 Gene3D G3DSA:3.10.290.10 2 62 6.3E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D172_009900 6b83659a0e0469e7d9619718139c2637 289 Pfam PF01479 S4 domain 7 51 7.5E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_009900 6b83659a0e0469e7d9619718139c2637 289 SMART SM00363 6 68 1.2E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_009900 6b83659a0e0469e7d9619718139c2637 289 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 108 122 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 D172_009900 6b83659a0e0469e7d9619718139c2637 289 SUPERFAMILY SSF55120 70 235 1.18E-41 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_009900 6b83659a0e0469e7d9619718139c2637 289 Gene3D G3DSA:3.30.70.1560 132 222 3.5E-51 T 14-10-2018 D172_009900 6b83659a0e0469e7d9619718139c2637 289 SUPERFAMILY SSF55174 8 99 3.97E-17 T 14-10-2018 D172_009900 6b83659a0e0469e7d9619718139c2637 289 Gene3D G3DSA:3.30.70.580 71 230 3.5E-51 T 14-10-2018 D172_009900 6b83659a0e0469e7d9619718139c2637 289 Pfam PF00849 RNA pseudouridylate synthase 70 200 2.6E-18 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_009900 6b83659a0e0469e7d9619718139c2637 289 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 74 232 1.7E-55 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 D172_016090 1947f7ff1d01c1b773ee1649282bf54e 391 SUPERFAMILY SSF53335 104 196 3.48E-9 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_016090 1947f7ff1d01c1b773ee1649282bf54e 391 Pfam PF13679 Methyltransferase domain 112 221 1.5E-14 T 14-10-2018 IPR025714 Methyltransferase domain D172_016090 1947f7ff1d01c1b773ee1649282bf54e 391 Gene3D G3DSA:3.40.50.150 70 247 5.6E-6 T 14-10-2018 D172_001675 d4d2bbe7fca1796eb5fd049ba93b432b 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 24.01 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D172_001675 d4d2bbe7fca1796eb5fd049ba93b432b 95 Gene3D G3DSA:2.30.33.40 1 95 4.3E-34 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 D172_001675 d4d2bbe7fca1796eb5fd049ba93b432b 95 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 1.1E-29 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D172_001675 d4d2bbe7fca1796eb5fd049ba93b432b 95 SUPERFAMILY SSF50129 1 94 8.36E-30 T 14-10-2018 IPR011032 GroES-like superfamily D172_001675 d4d2bbe7fca1796eb5fd049ba93b432b 95 SMART SM00883 2 94 2.6E-49 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D172_001675 d4d2bbe7fca1796eb5fd049ba93b432b 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 D172_001675 d4d2bbe7fca1796eb5fd049ba93b432b 95 PRINTS PR00297 10kDa chaperonin signature 3 18 1.1E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D172_001675 d4d2bbe7fca1796eb5fd049ba93b432b 95 PRINTS PR00297 10kDa chaperonin signature 25 46 1.1E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D172_001675 d4d2bbe7fca1796eb5fd049ba93b432b 95 PRINTS PR00297 10kDa chaperonin signature 60 72 1.1E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D172_001675 d4d2bbe7fca1796eb5fd049ba93b432b 95 PRINTS PR00297 10kDa chaperonin signature 81 94 1.1E-27 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 D172_019065 6da3ac0f89c11a1955dac868929d9eca 241 Gene3D G3DSA:1.25.40.10 20 227 4.6E-51 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_019065 6da3ac0f89c11a1955dac868929d9eca 241 Pfam PF08238 Sel1 repeat 125 159 2.9E-10 T 14-10-2018 IPR006597 Sel1-like repeat D172_019065 6da3ac0f89c11a1955dac868929d9eca 241 Pfam PF08238 Sel1 repeat 56 87 0.0017 T 14-10-2018 IPR006597 Sel1-like repeat D172_019065 6da3ac0f89c11a1955dac868929d9eca 241 Pfam PF08238 Sel1 repeat 90 123 1.2E-6 T 14-10-2018 IPR006597 Sel1-like repeat D172_019065 6da3ac0f89c11a1955dac868929d9eca 241 Pfam PF08238 Sel1 repeat 161 187 2.7E-5 T 14-10-2018 IPR006597 Sel1-like repeat D172_019065 6da3ac0f89c11a1955dac868929d9eca 241 SMART SM00671 125 160 2.4E-11 T 14-10-2018 IPR006597 Sel1-like repeat D172_019065 6da3ac0f89c11a1955dac868929d9eca 241 SMART SM00671 89 124 2.9E-7 T 14-10-2018 IPR006597 Sel1-like repeat D172_019065 6da3ac0f89c11a1955dac868929d9eca 241 SMART SM00671 53 88 1.5E-5 T 14-10-2018 IPR006597 Sel1-like repeat D172_019065 6da3ac0f89c11a1955dac868929d9eca 241 SMART SM00671 161 196 1.3E-5 T 14-10-2018 IPR006597 Sel1-like repeat D172_019065 6da3ac0f89c11a1955dac868929d9eca 241 SUPERFAMILY SSF81901 28 220 1.4E-42 T 14-10-2018 D172_009340 8cca0d81d34e8bfc7378ee352bde6700 204 SUPERFAMILY SSF48008 88 202 2.14E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_009340 8cca0d81d34e8bfc7378ee352bde6700 204 SMART SM00345 16 74 3.3E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_009340 8cca0d81d34e8bfc7378ee352bde6700 204 Gene3D G3DSA:1.20.120.530 84 204 5.9E-18 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_009340 8cca0d81d34e8bfc7378ee352bde6700 204 SUPERFAMILY SSF46785 11 77 8.59E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_009340 8cca0d81d34e8bfc7378ee352bde6700 204 Pfam PF07729 FCD domain 87 201 1.0E-17 T 14-10-2018 IPR011711 GntR, C-terminal D172_009340 8cca0d81d34e8bfc7378ee352bde6700 204 Gene3D G3DSA:1.10.10.10 8 75 2.4E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_009340 8cca0d81d34e8bfc7378ee352bde6700 204 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.8E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_009340 8cca0d81d34e8bfc7378ee352bde6700 204 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.8E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_009340 8cca0d81d34e8bfc7378ee352bde6700 204 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 74 1.3E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_016000 1033e8b66e4f67d83793054b61d58d90 161 Pfam PF05258 Protein of unknown function (DUF721) 11 98 9.6E-13 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 D172_000175 3ed43ed4af154405f5c25e106168a19f 462 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 371 439 4.1E-32 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 D172_000175 3ed43ed4af154405f5c25e106168a19f 462 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 461 34.409 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 D172_000175 3ed43ed4af154405f5c25e106168a19f 462 Gene3D G3DSA:1.10.1750.10 369 462 9.6E-39 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 D172_000175 3ed43ed4af154405f5c25e106168a19f 462 SMART SM00760 370 439 9.9E-45 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 D172_000175 3ed43ed4af154405f5c25e106168a19f 462 Pfam PF11638 DnaA N-terminal domain 4 64 4.3E-20 T 14-10-2018 IPR024633 DnaA N-terminal domain D172_000175 3ed43ed4af154405f5c25e106168a19f 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 420 439 2.2E-53 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D172_000175 3ed43ed4af154405f5c25e106168a19f 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 224 238 2.2E-53 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D172_000175 3ed43ed4af154405f5c25e106168a19f 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 192 206 2.2E-53 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D172_000175 3ed43ed4af154405f5c25e106168a19f 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 160 180 2.2E-53 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D172_000175 3ed43ed4af154405f5c25e106168a19f 462 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 258 285 2.2E-53 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like D172_000175 3ed43ed4af154405f5c25e106168a19f 462 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 460 1.3E-188 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 D172_000175 3ed43ed4af154405f5c25e106168a19f 462 Gene3D G3DSA:3.30.300.180 2 109 7.4E-37 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily D172_000175 3ed43ed4af154405f5c25e106168a19f 462 Pfam PF00308 Bacterial dnaA protein 128 344 4.8E-100 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA D172_000175 3ed43ed4af154405f5c25e106168a19f 462 ProSitePatterns PS01008 DnaA protein signature. 420 439 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 D172_000175 3ed43ed4af154405f5c25e106168a19f 462 Gene3D G3DSA:3.40.50.300 125 292 1.4E-49 T 14-10-2018 D172_000175 3ed43ed4af154405f5c25e106168a19f 462 SUPERFAMILY SSF52540 128 338 4.86E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_000175 3ed43ed4af154405f5c25e106168a19f 462 SMART SM00382 159 361 9.7E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_000175 3ed43ed4af154405f5c25e106168a19f 462 SUPERFAMILY SSF48295 359 461 2.46E-37 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 D172_000175 3ed43ed4af154405f5c25e106168a19f 462 Gene3D G3DSA:1.10.8.60 293 363 3.8E-25 T 14-10-2018 D172_009190 798927d441aa1787123001c4e7fea24a 360 Gene3D G3DSA:3.90.1150.10 252 360 4.9E-43 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_009190 798927d441aa1787123001c4e7fea24a 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 359 47.814 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 D172_009190 798927d441aa1787123001c4e7fea24a 360 Pfam PF00266 Aminotransferase class-V 4 348 3.5E-54 T 14-10-2018 IPR000192 Aminotransferase class V domain D172_009190 798927d441aa1787123001c4e7fea24a 360 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site D172_009190 798927d441aa1787123001c4e7fea24a 360 PIRSF PIRSF000525 1 360 5.2E-142 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 D172_009190 798927d441aa1787123001c4e7fea24a 360 SUPERFAMILY SSF53383 3 358 1.13E-109 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_009190 798927d441aa1787123001c4e7fea24a 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 3 359 4.2E-150 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 D172_009190 798927d441aa1787123001c4e7fea24a 360 Gene3D G3DSA:3.40.640.10 16 251 8.5E-86 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_003615 fb7a7891fdd78600af28c7158ad3f138 437 Pfam PF01551 Peptidase family M23 302 396 3.3E-32 T 14-10-2018 IPR016047 Peptidase M23 D172_003615 fb7a7891fdd78600af28c7158ad3f138 437 Pfam PF04225 Opacity-associated protein A LysM-like domain 82 160 8.2E-5 T 14-10-2018 IPR007340 Opacity-associated protein A D172_003615 fb7a7891fdd78600af28c7158ad3f138 437 SUPERFAMILY SSF51261 152 397 3.14E-71 T 14-10-2018 IPR011055 Duplicated hybrid motif D172_003615 fb7a7891fdd78600af28c7158ad3f138 437 Gene3D G3DSA:2.70.70.10 273 402 2.8E-80 T 14-10-2018 IPR011055 Duplicated hybrid motif D172_003615 fb7a7891fdd78600af28c7158ad3f138 437 Gene3D G3DSA:3.10.450.350 181 416 2.8E-80 T 14-10-2018 D172_003615 fb7a7891fdd78600af28c7158ad3f138 437 Gene3D G3DSA:3.10.450.350 76 166 9.8E-16 T 14-10-2018 D172_002805 ef7ecf578b0c3ce8aa7b289cb7771797 237 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 179 1.6E-44 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 D172_002805 ef7ecf578b0c3ce8aa7b289cb7771797 237 SMART SM00563 67 182 2.1E-40 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D172_002805 ef7ecf578b0c3ce8aa7b289cb7771797 237 Pfam PF01553 Acyltransferase 65 179 5.3E-30 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D172_002805 ef7ecf578b0c3ce8aa7b289cb7771797 237 SUPERFAMILY SSF69593 6 237 3.14E-49 T 14-10-2018 D172_013545 3dd5875776b0e49aef02e2ef6a7a6f56 135 Pfam PF00460 Flagella basal body rod protein 19 39 6.1E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 D172_013545 3dd5875776b0e49aef02e2ef6a7a6f56 135 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 131 1.1E-37 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 D172_013545 3dd5875776b0e49aef02e2ef6a7a6f56 135 PIRSF PIRSF002889 1 134 1.3E-40 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 D172_013545 3dd5875776b0e49aef02e2ef6a7a6f56 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site D172_006220 00c276f999e129b1712fc140df3eaf9d 322 Pfam PF08003 Protein of unknown function (DUF1698) 8 321 2.4E-156 T 14-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like D172_006220 00c276f999e129b1712fc140df3eaf9d 322 SUPERFAMILY SSF53335 92 321 8.29E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_006220 00c276f999e129b1712fc140df3eaf9d 322 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 8 321 2.7E-152 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 D172_006220 00c276f999e129b1712fc140df3eaf9d 322 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 55.913 T 14-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 D172_006220 00c276f999e129b1712fc140df3eaf9d 322 Gene3D G3DSA:3.40.50.150 83 310 4.6E-28 T 14-10-2018 D172_014410 7bc06cd2912b9f15a72b2b1be96d031b 147 SUPERFAMILY SSF109635 7 105 4.05E-34 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily D172_014410 7bc06cd2912b9f15a72b2b1be96d031b 147 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 109 133 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site D172_014410 7bc06cd2912b9f15a72b2b1be96d031b 147 SUPERFAMILY SSF57716 106 143 1.04E-9 T 14-10-2018 D172_014410 7bc06cd2912b9f15a72b2b1be96d031b 147 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 27 135 1.8E-49 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 D172_014410 7bc06cd2912b9f15a72b2b1be96d031b 147 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 106 138 2.4E-10 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 D172_014410 7bc06cd2912b9f15a72b2b1be96d031b 147 Gene3D G3DSA:1.20.120.910 15 145 1.5E-34 T 14-10-2018 D172_014410 7bc06cd2912b9f15a72b2b1be96d031b 147 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 23 145 28.804 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 D172_013460 33f773cdafbc76a8f073171a668a10bc 133 SUPERFAMILY SSF101116 13 125 4.71E-24 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 D172_013460 33f773cdafbc76a8f073171a668a10bc 133 TIGRFAM TIGR00208 fliS: flagellar protein FliS 7 124 6.4E-20 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 D172_013460 33f773cdafbc76a8f073171a668a10bc 133 Pfam PF02561 Flagellar protein FliS 7 124 3.9E-26 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 D172_013460 33f773cdafbc76a8f073171a668a10bc 133 Gene3D G3DSA:1.20.120.340 2 129 2.9E-29 T 14-10-2018 D172_013460 33f773cdafbc76a8f073171a668a10bc 133 PIRSF PIRSF039090 1 133 8.7E-40 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 D172_011185 0806ec3adf0424750b2850cab57182a9 508 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 3.3E-97 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 D172_011185 0806ec3adf0424750b2850cab57182a9 508 Gene3D G3DSA:3.20.130.10 307 491 8.5E-62 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 D172_011185 0806ec3adf0424750b2850cab57182a9 508 PIRSF PIRSF001394 1 507 1.1E-214 T 14-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 D172_011185 0806ec3adf0424750b2850cab57182a9 508 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 11 284 5.0E-60 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 D172_011185 0806ec3adf0424750b2850cab57182a9 508 Pfam PF05683 Fumarase C-terminus 289 491 6.4E-84 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 D172_011185 0806ec3adf0424750b2850cab57182a9 508 SUPERFAMILY SSF117457 318 489 3.79E-63 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 D172_011185 0806ec3adf0424750b2850cab57182a9 508 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 5.4E-50 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 D172_000020 338e72829d02bdb138836088312b7aa7 84 Gene3D G3DSA:3.30.160.140 1 84 1.4E-26 T 14-10-2018 IPR036692 Shew3726-like superfamily D172_000020 338e72829d02bdb138836088312b7aa7 84 Pfam PF07369 Protein of unknown function (DUF1488) 5 79 1.0E-17 T 14-10-2018 IPR009962 Protein of unknown function DUF1488 D172_000020 338e72829d02bdb138836088312b7aa7 84 SUPERFAMILY SSF160272 1 81 6.93E-24 T 14-10-2018 IPR036692 Shew3726-like superfamily D172_007025 8e3b808a0012c7c7d8822fdacf07698b 56 Pfam PF01783 Ribosomal L32p protein family 2 56 4.4E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_007025 8e3b808a0012c7c7d8822fdacf07698b 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.583 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_007025 8e3b808a0012c7c7d8822fdacf07698b 56 SUPERFAMILY SSF57829 2 55 4.39E-18 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 D172_007025 8e3b808a0012c7c7d8822fdacf07698b 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 4.7E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_013150 9bae99b12219a8af9561a1e19b3e48ab 639 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 418 8.0E-8 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_013150 9bae99b12219a8af9561a1e19b3e48ab 639 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 502 531 8.0E-8 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_013150 9bae99b12219a8af9561a1e19b3e48ab 639 SUPERFAMILY SSF58104 328 636 1.57E-65 T 14-10-2018 D172_013150 9bae99b12219a8af9561a1e19b3e48ab 639 Gene3D G3DSA:3.30.450.20 152 283 1.0E-19 T 14-10-2018 D172_013150 9bae99b12219a8af9561a1e19b3e48ab 639 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 439 603 2.2E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_013150 9bae99b12219a8af9561a1e19b3e48ab 639 SMART SM00304 306 360 1.4E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_013150 9bae99b12219a8af9561a1e19b3e48ab 639 Gene3D G3DSA:1.10.287.950 306 637 4.3E-65 T 14-10-2018 D172_013150 9bae99b12219a8af9561a1e19b3e48ab 639 Pfam PF02743 Cache domain 50 268 3.6E-14 T 14-10-2018 IPR033479 Double Cache domain 1 D172_013150 9bae99b12219a8af9561a1e19b3e48ab 639 SMART SM00283 375 636 1.2E-59 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_001065 a30f86a1df5e2e06cb984a8f4bed980e 110 Gene3D G3DSA:3.90.470.10 1 110 1.8E-45 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 D172_001065 a30f86a1df5e2e06cb984a8f4bed980e 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 3.4E-37 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 D172_001065 a30f86a1df5e2e06cb984a8f4bed980e 110 SUPERFAMILY SSF54843 1 109 1.16E-42 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 D172_001065 a30f86a1df5e2e06cb984a8f4bed980e 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 27.767 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001065 a30f86a1df5e2e06cb984a8f4bed980e 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001065 a30f86a1df5e2e06cb984a8f4bed980e 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 4.1E-47 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_015300 63979531f1ae3894244be409a842400d 349 Pfam PF08666 SAF domain 292 348 2.8E-8 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 D172_015300 63979531f1ae3894244be409a842400d 349 Pfam PF03102 NeuB family 39 276 5.7E-86 T 14-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 D172_015300 63979531f1ae3894244be409a842400d 349 SMART SM00858 291 349 1.7E-9 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 D172_015300 63979531f1ae3894244be409a842400d 349 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 18 343 2.2E-155 T 14-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 D172_015300 63979531f1ae3894244be409a842400d 349 Gene3D G3DSA:3.20.20.70 4 277 2.6E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_015300 63979531f1ae3894244be409a842400d 349 Gene3D G3DSA:3.90.1210.10 292 349 4.3E-19 T 14-10-2018 D172_015300 63979531f1ae3894244be409a842400d 349 SUPERFAMILY SSF51269 286 348 8.32E-18 T 14-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 D172_015300 63979531f1ae3894244be409a842400d 349 SUPERFAMILY SSF51569 5 300 2.2E-92 T 14-10-2018 D172_020045 bb34fd318bcce5707622616d00c071f3 315 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 3 312 1.0E-118 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 D172_020045 bb34fd318bcce5707622616d00c071f3 315 Pfam PF00296 Luciferase-like monooxygenase 10 222 7.8E-35 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 D172_020045 bb34fd318bcce5707622616d00c071f3 315 Gene3D G3DSA:3.20.20.30 1 315 9.3E-84 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 D172_020045 bb34fd318bcce5707622616d00c071f3 315 SUPERFAMILY SSF51679 4 312 2.75E-72 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 D172_000255 1b89464228b12b9a73bdfa9a30f0abfb 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_000255 1b89464228b12b9a73bdfa9a30f0abfb 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.706 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000255 1b89464228b12b9a73bdfa9a30f0abfb 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 1.5E-11 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_000255 1b89464228b12b9a73bdfa9a30f0abfb 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 1.6E-251 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000255 1b89464228b12b9a73bdfa9a30f0abfb 513 SUPERFAMILY SSF52540 96 381 5.57E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_000255 1b89464228b12b9a73bdfa9a30f0abfb 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.0E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_000255 1b89464228b12b9a73bdfa9a30f0abfb 513 SUPERFAMILY SSF47917 383 511 4.45E-45 T 14-10-2018 D172_000255 1b89464228b12b9a73bdfa9a30f0abfb 513 SUPERFAMILY SSF50615 10 94 6.87E-25 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_000255 1b89464228b12b9a73bdfa9a30f0abfb 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 2.0E-44 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000255 1b89464228b12b9a73bdfa9a30f0abfb 513 Gene3D G3DSA:3.40.50.300 94 382 3.8E-131 T 14-10-2018 D172_000255 1b89464228b12b9a73bdfa9a30f0abfb 513 Gene3D G3DSA:2.40.30.20 1 93 2.9E-28 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_000255 1b89464228b12b9a73bdfa9a30f0abfb 513 Gene3D G3DSA:1.20.150.20 383 513 3.6E-47 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_006530 7682521725f71dc1707fadc409204555 443 SUPERFAMILY SSF55073 15 159 1.88E-6 T 14-10-2018 IPR029787 Nucleotide cyclase D172_006530 7682521725f71dc1707fadc409204555 443 SUPERFAMILY SSF141868 183 427 4.84E-77 T 14-10-2018 IPR035919 EAL domain superfamily D172_006530 7682521725f71dc1707fadc409204555 443 Gene3D G3DSA:3.30.70.270 3 167 1.0E-10 T 14-10-2018 D172_006530 7682521725f71dc1707fadc409204555 443 Gene3D G3DSA:3.20.20.450 176 428 8.0E-80 T 14-10-2018 IPR035919 EAL domain superfamily D172_006530 7682521725f71dc1707fadc409204555 443 SMART SM00052 175 420 2.9E-83 T 14-10-2018 IPR001633 EAL domain D172_006530 7682521725f71dc1707fadc409204555 443 Pfam PF00990 Diguanylate cyclase, GGDEF domain 11 157 1.5E-5 T 14-10-2018 IPR000160 GGDEF domain D172_006530 7682521725f71dc1707fadc409204555 443 Pfam PF00563 EAL domain 183 415 1.7E-67 T 14-10-2018 IPR001633 EAL domain D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 457 5.4E-177 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 Gene3D G3DSA:3.30.300.20 377 459 4.3E-21 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 Gene3D G3DSA:3.40.50.300 2 160 2.7E-43 T 14-10-2018 D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 SUPERFAMILY SSF52540 4 163 8.61E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 Pfam PF01926 50S ribosome-binding GTPase 5 119 4.2E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 Pfam PF01926 50S ribosome-binding GTPase 204 321 7.6E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 377 457 2.3E-26 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 SUPERFAMILY SSF52540 137 463 9.2E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.5E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 1.5E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 152 2.1E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 200 364 8.4E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 Gene3D G3DSA:3.40.50.300 197 375 2.8E-47 T 14-10-2018 D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 PIRSF PIRSF006485 1 465 8.9E-179 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 Hamap MF_00195 GTPase Der [der]. 2 460 38.531 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 SMART SM00382 200 347 0.23 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_021005 f36f4db5f493baf28923ff8bd0301e2a 488 SMART SM00382 1 165 2.6 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_007925 de2135f4949e73e48f35162a32558990 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 118 4.4E-24 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 D172_007925 de2135f4949e73e48f35162a32558990 126 TIGRFAM TIGR00494 crcB: protein CrcB 7 121 8.7E-30 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 D172_007925 de2135f4949e73e48f35162a32558990 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 123 19.1 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 D172_020310 d709bcda7417acc88e42d2485f0cbe2c 166 TIGRFAM TIGR03645 glyox_marine: lactoylglutathione lyase family protein 5 166 4.5E-103 T 14-10-2018 IPR019883 Lactoylglutathione lyase D172_020310 d709bcda7417acc88e42d2485f0cbe2c 166 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 152 3.4E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D172_020310 d709bcda7417acc88e42d2485f0cbe2c 166 Gene3D G3DSA:3.10.180.10 2 154 2.3E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_020310 d709bcda7417acc88e42d2485f0cbe2c 166 SUPERFAMILY SSF54593 6 156 4.03E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_008385 99bd1e9d03b7ca66a4c29443b6bf279f 175 Pfam PF00258 Flavodoxin 6 160 4.2E-32 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 D172_008385 99bd1e9d03b7ca66a4c29443b6bf279f 175 SUPERFAMILY SSF52218 4 171 7.3E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_008385 99bd1e9d03b7ca66a4c29443b6bf279f 175 PIRSF PIRSF038996 1 172 3.9E-65 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 D172_008385 99bd1e9d03b7ca66a4c29443b6bf279f 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 7.1E-69 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 D172_008385 99bd1e9d03b7ca66a4c29443b6bf279f 175 Gene3D G3DSA:3.40.50.360 3 175 8.3E-54 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_008385 99bd1e9d03b7ca66a4c29443b6bf279f 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 D172_014905 189eaed2be530d55e9e62c62d6833be6 225 Gene3D G3DSA:1.10.150.240 16 95 1.5E-60 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D172_014905 189eaed2be530d55e9e62c62d6833be6 225 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 4 222 3.7E-71 T 14-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 D172_014905 189eaed2be530d55e9e62c62d6833be6 225 SUPERFAMILY SSF56784 2 222 1.45E-48 T 14-10-2018 IPR036412 HAD-like superfamily D172_014905 189eaed2be530d55e9e62c62d6833be6 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 7.3E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_014905 189eaed2be530d55e9e62c62d6833be6 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 7.3E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_014905 189eaed2be530d55e9e62c62d6833be6 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 7.3E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_014905 189eaed2be530d55e9e62c62d6833be6 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 7.3E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_014905 189eaed2be530d55e9e62c62d6833be6 225 Gene3D G3DSA:3.40.50.1000 5 218 1.5E-60 T 14-10-2018 IPR023214 HAD superfamily D172_014905 189eaed2be530d55e9e62c62d6833be6 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 3.3E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_014905 189eaed2be530d55e9e62c62d6833be6 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 4.9E-23 T 14-10-2018 D172_013665 eae4cc3ae8e0c9d9b5b6af7db58fda2b 267 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 259 20.377 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 D172_013665 eae4cc3ae8e0c9d9b5b6af7db58fda2b 267 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 262 2.0E-94 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 D172_013665 eae4cc3ae8e0c9d9b5b6af7db58fda2b 267 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 D172_013665 eae4cc3ae8e0c9d9b5b6af7db58fda2b 267 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 10 254 1.8E-82 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 D172_001950 8634cc052b6a431f0ae3176c9f85ef4e 744 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 462 736 7.6E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D172_001950 8634cc052b6a431f0ae3176c9f85ef4e 744 Gene3D G3DSA:2.130.10.10 87 397 2.4E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_001950 8634cc052b6a431f0ae3176c9f85ef4e 744 SUPERFAMILY SSF161098 440 676 5.32E-18 T 14-10-2018 IPR035906 MetI-like superfamily D172_001950 8634cc052b6a431f0ae3176c9f85ef4e 744 SUPERFAMILY SSF69322 173 406 3.4E-9 T 14-10-2018 D172_000425 fe9513f10a03ba9e7f0b46a138ddb923 433 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 166 174 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D172_000425 fe9513f10a03ba9e7f0b46a138ddb923 433 Gene3D G3DSA:3.40.50.300 2 224 2.5E-72 T 14-10-2018 D172_000425 fe9513f10a03ba9e7f0b46a138ddb923 433 Pfam PF00271 Helicase conserved C-terminal domain 244 350 1.0E-30 T 14-10-2018 IPR001650 Helicase, C-terminal D172_000425 fe9513f10a03ba9e7f0b46a138ddb923 433 SMART SM00490 269 350 8.1E-33 T 14-10-2018 IPR001650 Helicase, C-terminal D172_000425 fe9513f10a03ba9e7f0b46a138ddb923 433 Gene3D G3DSA:3.40.50.300 225 403 9.4E-48 T 14-10-2018 D172_000425 fe9513f10a03ba9e7f0b46a138ddb923 433 SUPERFAMILY SSF52540 87 372 5.68E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_000425 fe9513f10a03ba9e7f0b46a138ddb923 433 Pfam PF00270 DEAD/DEAH box helicase 32 207 1.7E-45 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D172_000425 fe9513f10a03ba9e7f0b46a138ddb923 433 SMART SM00487 27 233 1.4E-53 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_017470 de8b0be1c0d180620751b586098cde3f 118 SUPERFAMILY SSF46785 4 87 4.93E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_017470 de8b0be1c0d180620751b586098cde3f 118 Gene3D G3DSA:1.10.10.10 4 91 5.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_017470 de8b0be1c0d180620751b586098cde3f 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 1.2E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D172_017470 de8b0be1c0d180620751b586098cde3f 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 41 1.2E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D172_017470 de8b0be1c0d180620751b586098cde3f 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 1.2E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D172_017470 de8b0be1c0d180620751b586098cde3f 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.2E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D172_017470 de8b0be1c0d180620751b586098cde3f 118 SMART SM00418 8 86 6.7E-28 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D172_017470 de8b0be1c0d180620751b586098cde3f 118 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 6.1E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D172_009955 74a35bb36c44755fe6a37eed4534dc1b 165 SUPERFAMILY SSF51261 8 162 2.44E-26 T 14-10-2018 IPR011055 Duplicated hybrid motif D172_009955 74a35bb36c44755fe6a37eed4534dc1b 165 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 20 127 3.2E-18 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 D172_009955 74a35bb36c44755fe6a37eed4534dc1b 165 Gene3D G3DSA:2.70.70.10 8 163 6.8E-23 T 14-10-2018 IPR011055 Duplicated hybrid motif D172_018735 4b45f23d98226db11c889bdd57302341 477 Gene3D G3DSA:1.25.40.10 1 229 1.4E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_018735 4b45f23d98226db11c889bdd57302341 477 Pfam PF13469 Sulfotransferase family 243 431 5.1E-34 T 14-10-2018 D172_018735 4b45f23d98226db11c889bdd57302341 477 SUPERFAMILY SSF52540 232 466 1.48E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_018735 4b45f23d98226db11c889bdd57302341 477 SMART SM00028 33 66 0.076 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_018735 4b45f23d98226db11c889bdd57302341 477 SMART SM00028 173 206 26.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_018735 4b45f23d98226db11c889bdd57302341 477 SMART SM00028 1 32 85.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_018735 4b45f23d98226db11c889bdd57302341 477 Pfam PF13432 Tetratricopeptide repeat 3 61 2.8E-8 T 14-10-2018 D172_018735 4b45f23d98226db11c889bdd57302341 477 SUPERFAMILY SSF48452 2 204 2.58E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_018735 4b45f23d98226db11c889bdd57302341 477 Gene3D G3DSA:3.40.50.300 230 476 4.2E-51 T 14-10-2018 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 340 361 1.4E-50 T 14-10-2018 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 1.4E-50 T 14-10-2018 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 420 1.4E-50 T 14-10-2018 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 261 275 1.4E-50 T 14-10-2018 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.4E-50 T 14-10-2018 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 304 311 1.4E-50 T 14-10-2018 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.4E-50 T 14-10-2018 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 1.4E-50 T 14-10-2018 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.4E-50 T 14-10-2018 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 1.4E-28 T 14-10-2018 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 289 311 1.4E-28 T 14-10-2018 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.4E-28 T 14-10-2018 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 276 1.4E-28 T 14-10-2018 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 1.4E-28 T 14-10-2018 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 1 464 63.386 T 14-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 Gene3D G3DSA:3.30.390.30 343 464 1.7E-31 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 SUPERFAMILY SSF51905 4 317 5.54E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 Gene3D G3DSA:3.50.50.60 5 331 8.5E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 Gene3D G3DSA:3.50.50.60 156 274 8.5E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 PIRSF PIRSF000350 1 461 4.5E-72 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 455 8.1E-28 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 SUPERFAMILY SSF55424 344 462 3.61E-29 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D172_016720 f72fdf944cd046510ebc4b56418e3a9d 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 324 2.2E-61 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D172_018260 1d2fa5b342f88b694f39f94e5aeda98e 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 169 1.7E-36 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 D172_018260 1d2fa5b342f88b694f39f94e5aeda98e 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 381 527 1.9E-35 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 D172_018260 1d2fa5b342f88b694f39f94e5aeda98e 574 SUPERFAMILY SSF52518 2 177 1.32E-39 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_018260 1d2fa5b342f88b694f39f94e5aeda98e 574 Gene3D G3DSA:3.40.50.970 1 177 1.6E-54 T 14-10-2018 D172_018260 1d2fa5b342f88b694f39f94e5aeda98e 574 SUPERFAMILY SSF52518 359 557 1.45E-54 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_018260 1d2fa5b342f88b694f39f94e5aeda98e 574 Gene3D G3DSA:3.40.50.1220 179 333 4.0E-44 T 14-10-2018 D172_018260 1d2fa5b342f88b694f39f94e5aeda98e 574 Gene3D G3DSA:3.40.50.970 350 574 1.4E-62 T 14-10-2018 D172_018260 1d2fa5b342f88b694f39f94e5aeda98e 574 SUPERFAMILY SSF52467 183 350 1.96E-40 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily D172_018260 1d2fa5b342f88b694f39f94e5aeda98e 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 318 2.1E-28 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 D172_010340 bbf8ecff9f36de64023329801c176ecc 197 PIRSF PIRSF020606 1 193 4.2E-75 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 D172_010340 bbf8ecff9f36de64023329801c176ecc 197 Pfam PF09997 Predicted membrane protein (DUF2238) 34 171 2.2E-55 T 14-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 D172_010080 df3793cefea1fb8119deb49b7fd55929 149 Pfam PF13673 Acetyltransferase (GNAT) domain 46 147 4.8E-14 T 14-10-2018 IPR000182 GNAT domain D172_010080 df3793cefea1fb8119deb49b7fd55929 149 SUPERFAMILY SSF55729 34 135 9.57E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_010080 df3793cefea1fb8119deb49b7fd55929 149 Gene3D G3DSA:3.40.630.30 1 142 1.5E-15 T 14-10-2018 D172_014305 ff0268c805e59247adbe3fbd3f81f381 295 SUPERFAMILY SSF48576 8 286 8.22E-85 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily D172_014305 ff0268c805e59247adbe3fbd3f81f381 295 Gene3D G3DSA:1.10.600.10 2 295 2.7E-98 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily D172_014305 ff0268c805e59247adbe3fbd3f81f381 295 Pfam PF00348 Polyprenyl synthetase 31 270 1.1E-60 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 D172_014305 ff0268c805e59247adbe3fbd3f81f381 295 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 214 226 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site D172_014305 ff0268c805e59247adbe3fbd3f81f381 295 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site D172_009440 82f7f82cb073cb9447584a4a0327f80f 272 Pfam PF00756 Putative esterase 26 256 8.8E-20 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 D172_009440 82f7f82cb073cb9447584a4a0327f80f 272 Gene3D G3DSA:3.40.50.1820 14 267 1.3E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_009440 82f7f82cb073cb9447584a4a0327f80f 272 SUPERFAMILY SSF53474 14 262 4.19E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_004285 18fa28b1be931a45210c4f41b3a220e1 243 SUPERFAMILY SSF103088 113 228 7.19E-26 T 14-10-2018 IPR036737 OmpA-like domain superfamily D172_004285 18fa28b1be931a45210c4f41b3a220e1 243 PRINTS PR01021 OMPA domain signature 160 175 3.3E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D172_004285 18fa28b1be931a45210c4f41b3a220e1 243 PRINTS PR01021 OMPA domain signature 175 191 3.3E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D172_004285 18fa28b1be931a45210c4f41b3a220e1 243 PRINTS PR01021 OMPA domain signature 130 152 3.3E-6 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D172_004285 18fa28b1be931a45210c4f41b3a220e1 243 TIGRFAM TIGR03789 pdsO: proteobacterial sortase system peptidoglycan-associated protein 2 229 2.8E-84 T 14-10-2018 IPR022511 Proteobacterial sortase system peptidoglycan-associated protein D172_004285 18fa28b1be931a45210c4f41b3a220e1 243 Pfam PF00691 OmpA family 130 220 3.4E-17 T 14-10-2018 IPR006665 OmpA-like domain D172_004285 18fa28b1be931a45210c4f41b3a220e1 243 Gene3D G3DSA:3.30.1330.60 87 235 2.6E-26 T 14-10-2018 IPR036737 OmpA-like domain superfamily D172_017585 3b925e08bc2f2e44b07488ce84ec21ec 608 PIRSF PIRSF028304 1 607 2.7E-164 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like D172_017585 3b925e08bc2f2e44b07488ce84ec21ec 608 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 608 2.8E-189 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like D172_017585 3b925e08bc2f2e44b07488ce84ec21ec 608 Pfam PF05947 Type VI secretion system, TssF 6 607 1.4E-184 T 14-10-2018 IPR010272 Type VI secretion system, TssF-like D172_020025 e3a8645ecedb1bfa1509daf34592fdfc 419 Pfam PF13438 Domain of unknown function (DUF4113) 367 416 3.6E-21 T 14-10-2018 IPR025188 Domain of unknown function DUF4113 D172_020025 e3a8645ecedb1bfa1509daf34592fdfc 419 SUPERFAMILY SSF56672 1 237 8.9E-65 T 14-10-2018 D172_020025 e3a8645ecedb1bfa1509daf34592fdfc 419 Pfam PF00817 impB/mucB/samB family 5 151 1.0E-29 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 D172_020025 e3a8645ecedb1bfa1509daf34592fdfc 419 Gene3D G3DSA:2.30.40.20 10 73 1.7E-32 T 14-10-2018 D172_020025 e3a8645ecedb1bfa1509daf34592fdfc 419 Gene3D G3DSA:1.10.150.20 179 232 9.0E-9 T 14-10-2018 D172_020025 e3a8645ecedb1bfa1509daf34592fdfc 419 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 352 6.3E-8 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 D172_020025 e3a8645ecedb1bfa1509daf34592fdfc 419 Pfam PF11798 IMS family HHH motif 171 200 2.4E-5 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 D172_020025 e3a8645ecedb1bfa1509daf34592fdfc 419 Gene3D G3DSA:3.30.70.270 5 156 1.7E-32 T 14-10-2018 D172_009745 3417229c5809ce4e585d3a07316d2923 692 Pfam PF01431 Peptidase family M13 489 688 4.0E-64 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 D172_009745 3417229c5809ce4e585d3a07316d2923 692 Pfam PF05649 Peptidase family M13 60 437 5.3E-93 T 14-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 D172_009745 3417229c5809ce4e585d3a07316d2923 692 Gene3D G3DSA:1.10.1380.10 86 476 3.7E-219 T 14-10-2018 D172_009745 3417229c5809ce4e585d3a07316d2923 692 Gene3D G3DSA:3.40.390.10 56 692 3.7E-219 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 D172_009745 3417229c5809ce4e585d3a07316d2923 692 SUPERFAMILY SSF55486 49 692 1.76E-195 T 14-10-2018 D172_009745 3417229c5809ce4e585d3a07316d2923 692 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 591 602 5.1E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 D172_009745 3417229c5809ce4e585d3a07316d2923 692 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 481 493 5.1E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 D172_009745 3417229c5809ce4e585d3a07316d2923 692 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 520 536 5.1E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 D172_009745 3417229c5809ce4e585d3a07316d2923 692 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 499 511 5.1E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 D172_019455 f9132eb6343523933b9221ceddc3ddf8 267 Pfam PF07063 Domain of unknown function (DUF1338) 7 264 9.7E-45 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 D172_019455 f9132eb6343523933b9221ceddc3ddf8 267 Gene3D G3DSA:3.10.180.50 2 242 2.6E-98 T 14-10-2018 D172_019455 f9132eb6343523933b9221ceddc3ddf8 267 SMART SM01150 5 265 1.5E-122 T 14-10-2018 IPR009770 Domain of unknown function DUF1338 D172_003470 dd481a653b55908258c0f3023482ecdd 97 Pfam PF13466 STAS domain 15 89 1.8E-12 T 14-10-2018 IPR002645 STAS domain D172_003470 dd481a653b55908258c0f3023482ecdd 97 Gene3D G3DSA:3.30.750.24 10 97 5.7E-12 T 14-10-2018 IPR036513 STAS domain superfamily D172_003470 dd481a653b55908258c0f3023482ecdd 97 SUPERFAMILY SSF52091 11 96 9.81E-14 T 14-10-2018 IPR036513 STAS domain superfamily D172_011260 4ba387da520f2231faed0a70e516c1dd 396 Gene3D G3DSA:2.30.130.10 2 72 1.0E-27 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 D172_011260 4ba387da520f2231faed0a70e516c1dd 396 Gene3D G3DSA:3.30.750.80 73 181 1.1E-33 T 14-10-2018 D172_011260 4ba387da520f2231faed0a70e516c1dd 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 172 372 7.6E-30 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 D172_011260 4ba387da520f2231faed0a70e516c1dd 396 SUPERFAMILY SSF88697 4 73 9.2E-17 T 14-10-2018 IPR015947 PUA-like superfamily D172_011260 4ba387da520f2231faed0a70e516c1dd 396 Gene3D G3DSA:3.40.50.150 183 396 3.4E-73 T 14-10-2018 D172_011260 4ba387da520f2231faed0a70e516c1dd 396 SMART SM00359 3 88 1.5E-10 T 14-10-2018 IPR002478 PUA domain GO:0003723 D172_011260 4ba387da520f2231faed0a70e516c1dd 396 SUPERFAMILY SSF53335 79 392 4.26E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_011260 4ba387da520f2231faed0a70e516c1dd 396 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 396 70.844 T 14-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 D172_012800 12619c1117e47b5b8370c229e7b54da1 205 PRINTS PR00127 Clp protease catalytic subunit P signature 28 43 1.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D172_012800 12619c1117e47b5b8370c229e7b54da1 205 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 1.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D172_012800 12619c1117e47b5b8370c229e7b54da1 205 PRINTS PR00127 Clp protease catalytic subunit P signature 177 196 1.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D172_012800 12619c1117e47b5b8370c229e7b54da1 205 PRINTS PR00127 Clp protease catalytic subunit P signature 120 139 1.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D172_012800 12619c1117e47b5b8370c229e7b54da1 205 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 1.3E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D172_012800 12619c1117e47b5b8370c229e7b54da1 205 Gene3D G3DSA:3.90.226.10 1 204 1.3E-84 T 14-10-2018 D172_012800 12619c1117e47b5b8370c229e7b54da1 205 SUPERFAMILY SSF52096 20 203 7.03E-76 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_012800 12619c1117e47b5b8370c229e7b54da1 205 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 99 110 - T 14-10-2018 IPR018215 ClpP, Ser active site D172_012800 12619c1117e47b5b8370c229e7b54da1 205 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 121 134 - T 14-10-2018 IPR033135 ClpP, histidine active site D172_012800 12619c1117e47b5b8370c229e7b54da1 205 Pfam PF00574 Clp protease 22 201 4.6E-90 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA D172_012800 12619c1117e47b5b8370c229e7b54da1 205 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 11 200 2.1E-106 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D172_012800 12619c1117e47b5b8370c229e7b54da1 205 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 12 202 44.729 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 D172_010710 33281d4a9ca5ee4c8252f8ff535e881b 405 Pfam PF00589 Phage integrase family 209 377 1.2E-20 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D172_010710 33281d4a9ca5ee4c8252f8ff535e881b 405 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 98 151 1.8E-5 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D172_010710 33281d4a9ca5ee4c8252f8ff535e881b 405 Gene3D G3DSA:1.10.150.130 100 200 1.8E-11 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal D172_010710 33281d4a9ca5ee4c8252f8ff535e881b 405 SUPERFAMILY SSF56349 97 386 2.15E-52 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D172_010710 33281d4a9ca5ee4c8252f8ff535e881b 405 Pfam PF13356 Arm DNA-binding domain 4 86 3.2E-8 T 14-10-2018 IPR025166 Integrase, DNA-binding domain D172_010710 33281d4a9ca5ee4c8252f8ff535e881b 405 Gene3D G3DSA:1.10.443.10 210 393 5.9E-22 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D172_010710 33281d4a9ca5ee4c8252f8ff535e881b 405 Gene3D G3DSA:3.30.160.390 1 99 4.9E-13 T 14-10-2018 IPR038488 Integrase, DNA-binding domain superfamily D172_003290 2671c37b356ee7c977b2c047c0aec938 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 50 68 8.2E-15 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_003290 2671c37b356ee7c977b2c047c0aec938 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 172 185 8.2E-15 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_003290 2671c37b356ee7c977b2c047c0aec938 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 262 281 8.2E-15 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_003290 2671c37b356ee7c977b2c047c0aec938 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 70 82 8.2E-15 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_003290 2671c37b356ee7c977b2c047c0aec938 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 273 372 5.8E-7 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 D172_003290 2671c37b356ee7c977b2c047c0aec938 416 PRINTS PR01182 Ornithine decarboxylase signature 122 144 3.0E-13 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 D172_003290 2671c37b356ee7c977b2c047c0aec938 416 PRINTS PR01182 Ornithine decarboxylase signature 48 75 3.0E-13 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 D172_003290 2671c37b356ee7c977b2c047c0aec938 416 PRINTS PR01182 Ornithine decarboxylase signature 335 345 3.0E-13 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 D172_003290 2671c37b356ee7c977b2c047c0aec938 416 PRINTS PR01182 Ornithine decarboxylase signature 92 116 3.0E-13 T 14-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 D172_003290 2671c37b356ee7c977b2c047c0aec938 416 Gene3D G3DSA:3.20.20.10 43 270 4.5E-80 T 14-10-2018 IPR029066 PLP-binding barrel D172_003290 2671c37b356ee7c977b2c047c0aec938 416 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 210 223 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site D172_003290 2671c37b356ee7c977b2c047c0aec938 416 SUPERFAMILY SSF51419 22 273 8.72E-54 T 14-10-2018 IPR029066 PLP-binding barrel D172_003290 2671c37b356ee7c977b2c047c0aec938 416 SUPERFAMILY SSF50621 242 400 2.93E-25 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D172_003290 2671c37b356ee7c977b2c047c0aec938 416 Gene3D G3DSA:2.40.37.10 271 385 4.5E-80 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D172_003290 2671c37b356ee7c977b2c047c0aec938 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 30 272 3.4E-48 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 D172_019465 99ce427e62e10221d3faa5e04f0368b9 344 SUPERFAMILY SSF55729 1 344 8.62E-135 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_019465 99ce427e62e10221d3faa5e04f0368b9 344 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 343 2.4E-140 T 14-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 D172_019465 99ce427e62e10221d3faa5e04f0368b9 344 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 342 2.1E-141 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 D172_019465 99ce427e62e10221d3faa5e04f0368b9 344 Gene3D G3DSA:3.40.630.30 1 273 1.4E-118 T 14-10-2018 D172_019465 99ce427e62e10221d3faa5e04f0368b9 344 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 343 9.8E-137 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 D172_020295 a64c4702b3b368139f6649fa78852c0c 248 SUPERFAMILY SSF53448 26 219 5.25E-18 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_020295 a64c4702b3b368139f6649fa78852c0c 248 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 67 180 5.3E-14 T 14-10-2018 IPR018641 Transferase 1, rSAM/selenodomain-associated D172_020295 a64c4702b3b368139f6649fa78852c0c 248 Gene3D G3DSA:3.90.550.10 19 244 4.8E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_020870 739ad405ba1940243d2e51e12bfc5ea5 442 Gene3D G3DSA:1.10.3210.10 161 379 8.0E-29 T 14-10-2018 D172_020870 739ad405ba1940243d2e51e12bfc5ea5 442 Pfam PF13487 HD domain 259 317 2.2E-15 T 14-10-2018 D172_020870 739ad405ba1940243d2e51e12bfc5ea5 442 Pfam PF00072 Response regulator receiver domain 15 124 5.3E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_020870 739ad405ba1940243d2e51e12bfc5ea5 442 Gene3D G3DSA:3.40.50.2300 2 151 2.7E-32 T 14-10-2018 D172_020870 739ad405ba1940243d2e51e12bfc5ea5 442 SUPERFAMILY SSF52172 10 189 7.26E-35 T 14-10-2018 IPR011006 CheY-like superfamily D172_020870 739ad405ba1940243d2e51e12bfc5ea5 442 SMART SM00448 13 125 1.7E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_010640 095adf38eb214df5f616bae2dc571273 138 SUPERFAMILY SSF143100 1 67 1.57E-17 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like D172_010640 095adf38eb214df5f616bae2dc571273 138 Gene3D G3DSA:3.30.160.250 1 85 7.7E-23 T 14-10-2018 D172_010640 095adf38eb214df5f616bae2dc571273 138 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 128 2.7E-45 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system D172_021065 813f20d4a02f59bc575f6ac62d99e7c2 907 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 168 2.2E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_021065 813f20d4a02f59bc575f6ac62d99e7c2 907 SUPERFAMILY SSF56935 33 907 8.24E-95 T 14-10-2018 D172_021065 813f20d4a02f59bc575f6ac62d99e7c2 907 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 34 907 4.9E-194 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_021065 813f20d4a02f59bc575f6ac62d99e7c2 907 Pfam PF00593 TonB dependent receptor 421 906 6.1E-45 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_021065 813f20d4a02f59bc575f6ac62d99e7c2 907 Gene3D G3DSA:2.170.130.10 25 173 1.0E-18 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_021065 813f20d4a02f59bc575f6ac62d99e7c2 907 Gene3D G3DSA:2.40.170.20 332 907 2.2E-50 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_018400 2017f6ba5f59a917f7e593bde6fb3ace 852 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 140 837 4.0E-223 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 D172_018400 2017f6ba5f59a917f7e593bde6fb3ace 852 Gene3D G3DSA:3.40.50.300 20 481 9.6E-181 T 14-10-2018 D172_018400 2017f6ba5f59a917f7e593bde6fb3ace 852 Gene3D G3DSA:3.40.50.300 514 848 1.0E-128 T 14-10-2018 D172_018400 2017f6ba5f59a917f7e593bde6fb3ace 852 Pfam PF00005 ABC transporter 520 772 5.2E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_018400 2017f6ba5f59a917f7e593bde6fb3ace 852 ProSitePatterns PS00211 ABC transporters family signature. 742 756 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_018400 2017f6ba5f59a917f7e593bde6fb3ace 852 Gene3D G3DSA:1.20.1580.10 106 379 9.6E-181 T 14-10-2018 D172_018400 2017f6ba5f59a917f7e593bde6fb3ace 852 SUPERFAMILY SSF52540 20 461 5.5E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_018400 2017f6ba5f59a917f7e593bde6fb3ace 852 ProSitePatterns PS00211 ABC transporters family signature. 379 393 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_018400 2017f6ba5f59a917f7e593bde6fb3ace 852 Gene3D G3DSA:1.10.8.280 164 288 9.6E-181 T 14-10-2018 D172_018400 2017f6ba5f59a917f7e593bde6fb3ace 852 SUPERFAMILY SSF52540 517 825 1.48E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_018400 2017f6ba5f59a917f7e593bde6fb3ace 852 Gene3D G3DSA:1.20.1580.10 626 783 1.0E-128 T 14-10-2018 D172_009025 e5e4542305dac84c2541753463d69b1e 144 Pfam PF13411 MerR HTH family regulatory protein 23 87 1.4E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_009025 e5e4542305dac84c2541753463d69b1e 144 SMART SM00422 23 90 3.5E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_009025 e5e4542305dac84c2541753463d69b1e 144 SUPERFAMILY SSF46955 23 137 6.59E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily D172_009025 e5e4542305dac84c2541753463d69b1e 144 Gene3D G3DSA:1.10.1660.10 10 131 2.1E-26 T 14-10-2018 D172_017145 59f5c6dc1f6ab7e5352af49de80a574c 151 SUPERFAMILY SSF46785 1 60 1.12E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_017145 59f5c6dc1f6ab7e5352af49de80a574c 151 SUPERFAMILY SSF54909 62 151 1.02E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel D172_017145 59f5c6dc1f6ab7e5352af49de80a574c 151 Pfam PF13404 AsnC-type helix-turn-helix domain 2 43 8.3E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_017145 59f5c6dc1f6ab7e5352af49de80a574c 151 Pfam PF01037 Lrp/AsnC ligand binding domain 70 142 2.5E-20 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D172_017145 59f5c6dc1f6ab7e5352af49de80a574c 151 Gene3D G3DSA:1.10.10.10 1 53 2.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_017145 59f5c6dc1f6ab7e5352af49de80a574c 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 3.1E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_017145 59f5c6dc1f6ab7e5352af49de80a574c 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 3.1E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_017145 59f5c6dc1f6ab7e5352af49de80a574c 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 3.1E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_017145 59f5c6dc1f6ab7e5352af49de80a574c 151 SMART SM00344 2 111 6.1E-36 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 D172_017145 59f5c6dc1f6ab7e5352af49de80a574c 151 Gene3D G3DSA:3.30.70.920 54 146 6.8E-23 T 14-10-2018 D172_008345 1501f00e1900d6ce2740f271d51067b8 238 SUPERFAMILY SSF46548 109 234 1.73E-37 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D172_008345 1501f00e1900d6ce2740f271d51067b8 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 230 1.0E-86 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_008345 1501f00e1900d6ce2740f271d51067b8 238 SUPERFAMILY SSF54292 4 108 4.49E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D172_008345 1501f00e1900d6ce2740f271d51067b8 238 Gene3D G3DSA:3.10.20.30 1 108 5.2E-34 T 14-10-2018 IPR012675 Beta-grasp domain superfamily D172_008345 1501f00e1900d6ce2740f271d51067b8 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 1.2E-9 T 14-10-2018 D172_008345 1501f00e1900d6ce2740f271d51067b8 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D172_008345 1501f00e1900d6ce2740f271d51067b8 238 Gene3D G3DSA:1.10.1060.10 109 238 7.7E-57 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D172_008345 1501f00e1900d6ce2740f271d51067b8 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 6 113 1.9E-31 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_013980 aa107b9d2848b57bec54dbed3db8043d 384 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 9 375 2.1E-127 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 D172_013980 aa107b9d2848b57bec54dbed3db8043d 384 SUPERFAMILY SSF55031 179 289 1.39E-20 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain D172_013980 aa107b9d2848b57bec54dbed3db8043d 384 SUPERFAMILY SSF53187 4 378 6.79E-56 T 14-10-2018 D172_013980 aa107b9d2848b57bec54dbed3db8043d 384 Pfam PF07687 Peptidase dimerisation domain 176 287 1.9E-22 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain D172_013980 aa107b9d2848b57bec54dbed3db8043d 384 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 381 56.619 T 14-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 D172_013980 aa107b9d2848b57bec54dbed3db8043d 384 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 D172_013980 aa107b9d2848b57bec54dbed3db8043d 384 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 108 145 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 D172_013980 aa107b9d2848b57bec54dbed3db8043d 384 Gene3D G3DSA:3.40.630.10 11 366 3.3E-82 T 14-10-2018 D172_013980 aa107b9d2848b57bec54dbed3db8043d 384 Gene3D G3DSA:3.30.70.360 179 301 3.3E-82 T 14-10-2018 D172_013980 aa107b9d2848b57bec54dbed3db8043d 384 Pfam PF01546 Peptidase family M20/M25/M40 74 377 1.9E-31 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 D172_008445 f418afede1448a309d7694bd225a8df6 541 SUPERFAMILY SSF52025 110 214 6.02E-7 T 14-10-2018 D172_008445 f418afede1448a309d7694bd225a8df6 541 Pfam PF02225 PA domain 133 224 9.9E-8 T 14-10-2018 IPR003137 PA domain D172_008445 f418afede1448a309d7694bd225a8df6 541 Gene3D G3DSA:3.40.630.10 244 521 4.3E-47 T 14-10-2018 D172_008445 f418afede1448a309d7694bd225a8df6 541 Gene3D G3DSA:3.40.630.10 29 121 2.0E-5 T 14-10-2018 D172_008445 f418afede1448a309d7694bd225a8df6 541 Pfam PF04389 Peptidase family M28 299 513 3.8E-44 T 14-10-2018 IPR007484 Peptidase M28 D172_008445 f418afede1448a309d7694bd225a8df6 541 SUPERFAMILY SSF53187 33 523 3.6E-63 T 14-10-2018 D172_001310 5b1a4e441000a519e450be8045d3d8ec 898 SUPERFAMILY SSF56935 31 898 4.03E-86 T 14-10-2018 D172_001310 5b1a4e441000a519e450be8045d3d8ec 898 Gene3D G3DSA:2.170.130.10 30 178 4.9E-18 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_001310 5b1a4e441000a519e450be8045d3d8ec 898 Pfam PF00593 TonB dependent receptor 427 897 3.3E-33 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_001310 5b1a4e441000a519e450be8045d3d8ec 898 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 39 898 3.5E-178 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_001310 5b1a4e441000a519e450be8045d3d8ec 898 Gene3D G3DSA:2.40.170.20 251 898 1.0E-43 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_001310 5b1a4e441000a519e450be8045d3d8ec 898 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 881 898 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site D172_001310 5b1a4e441000a519e450be8045d3d8ec 898 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 173 1.6E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_004695 04d1d8e33900d2a9ed86593c23b1c400 325 Gene3D G3DSA:3.30.66.10 8 89 1.1E-24 T 14-10-2018 IPR035447 DNA topoisomerase I, N-terminal D172_004695 04d1d8e33900d2a9ed86593c23b1c400 325 Gene3D G3DSA:1.10.132.120 90 319 1.4E-71 T 14-10-2018 D172_004695 04d1d8e33900d2a9ed86593c23b1c400 325 Gene3D G3DSA:3.90.15.10 113 231 1.4E-71 T 14-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 D172_004695 04d1d8e33900d2a9ed86593c23b1c400 325 SUPERFAMILY SSF56349 78 320 5.0E-59 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D172_004695 04d1d8e33900d2a9ed86593c23b1c400 325 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 145 159 2.7E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 D172_004695 04d1d8e33900d2a9ed86593c23b1c400 325 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 230 244 2.7E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 D172_004695 04d1d8e33900d2a9ed86593c23b1c400 325 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 274 285 2.7E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 D172_004695 04d1d8e33900d2a9ed86593c23b1c400 325 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 122 141 2.7E-7 T 14-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 D172_004695 04d1d8e33900d2a9ed86593c23b1c400 325 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 81 253 1.7E-29 T 14-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 D172_004695 04d1d8e33900d2a9ed86593c23b1c400 325 SUPERFAMILY SSF55869 23 82 1.44E-17 T 14-10-2018 IPR035447 DNA topoisomerase I, N-terminal D172_014360 8112819edff968384c61a1f472fc5b7a 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 D172_014360 8112819edff968384c61a1f472fc5b7a 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 418 52.125 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 D172_014360 8112819edff968384c61a1f472fc5b7a 418 Gene3D G3DSA:3.40.640.10 37 290 3.0E-183 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_014360 8112819edff968384c61a1f472fc5b7a 418 Gene3D G3DSA:3.90.1150.10 10 397 3.0E-183 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_014360 8112819edff968384c61a1f472fc5b7a 418 SUPERFAMILY SSF53383 6 417 4.62E-178 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_014360 8112819edff968384c61a1f472fc5b7a 418 Pfam PF00464 Serine hydroxymethyltransferase 8 387 1.1E-181 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 D172_014360 8112819edff968384c61a1f472fc5b7a 418 PIRSF PIRSF000412 1 417 1.4E-165 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 D172_018630 9ab5fa4f92c41c1c03249daa2fa2e2ef 301 Gene3D G3DSA:3.40.190.10 92 294 4.2E-47 T 14-10-2018 D172_018630 9ab5fa4f92c41c1c03249daa2fa2e2ef 301 Gene3D G3DSA:3.40.190.10 163 268 4.2E-47 T 14-10-2018 D172_018630 9ab5fa4f92c41c1c03249daa2fa2e2ef 301 Gene3D G3DSA:1.10.10.10 3 89 2.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_018630 9ab5fa4f92c41c1c03249daa2fa2e2ef 301 Pfam PF03466 LysR substrate binding domain 89 296 1.6E-28 T 14-10-2018 IPR005119 LysR, substrate-binding D172_018630 9ab5fa4f92c41c1c03249daa2fa2e2ef 301 SUPERFAMILY SSF53850 91 298 1.14E-31 T 14-10-2018 D172_018630 9ab5fa4f92c41c1c03249daa2fa2e2ef 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.2E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_018630 9ab5fa4f92c41c1c03249daa2fa2e2ef 301 SUPERFAMILY SSF46785 4 87 5.06E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_007220 a2727d179e5a504330029f3e2cc36d54 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 9.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_007220 a2727d179e5a504330029f3e2cc36d54 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 479 9.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_007220 a2727d179e5a504330029f3e2cc36d54 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 9.4E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_007220 a2727d179e5a504330029f3e2cc36d54 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 481 9.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_007220 a2727d179e5a504330029f3e2cc36d54 484 SUPERFAMILY SSF55874 318 480 3.01E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_007220 a2727d179e5a504330029f3e2cc36d54 484 SMART SM00388 260 328 6.8E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_007220 a2727d179e5a504330029f3e2cc36d54 484 SUPERFAMILY SSF47384 246 328 1.06E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_007220 a2727d179e5a504330029f3e2cc36d54 484 SMART SM00387 371 482 1.1E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_007220 a2727d179e5a504330029f3e2cc36d54 484 Gene3D G3DSA:1.10.287.130 246 327 5.2E-11 T 14-10-2018 D172_007220 a2727d179e5a504330029f3e2cc36d54 484 Gene3D G3DSA:3.30.565.10 331 483 1.9E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_007220 a2727d179e5a504330029f3e2cc36d54 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 261 326 4.5E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_011285 d17b1740103fc82b577a4737e0de8bf6 234 Pfam PF07277 SapC 9 226 7.1E-68 T 14-10-2018 IPR010836 SapC D172_015730 967a06237e570982c173b72cd48f8677 490 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 427 7.3E-164 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 D172_015730 967a06237e570982c173b72cd48f8677 490 Pfam PF00575 S1 RNA binding domain 38 110 5.6E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 D172_015730 967a06237e570982c173b72cd48f8677 490 SMART SM00316 37 123 1.4E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 D172_015730 967a06237e570982c173b72cd48f8677 490 Pfam PF10150 Ribonuclease E/G family 125 394 1.4E-101 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 D172_015730 967a06237e570982c173b72cd48f8677 490 Gene3D G3DSA:3.40.1260.20 403 490 9.5E-7 T 14-10-2018 D172_015730 967a06237e570982c173b72cd48f8677 490 SUPERFAMILY SSF50249 39 128 4.51E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_015730 967a06237e570982c173b72cd48f8677 490 Gene3D G3DSA:2.40.50.140 34 128 1.7E-29 T 14-10-2018 D172_020440 01da653cfc17a3cd620d8f5c2045db03 173 Pfam PF08212 Lipocalin-like domain 32 173 9.9E-40 T 14-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain D172_020440 01da653cfc17a3cd620d8f5c2045db03 173 SUPERFAMILY SSF50814 7 173 1.18E-49 T 14-10-2018 IPR012674 Calycin D172_020440 01da653cfc17a3cd620d8f5c2045db03 173 Gene3D G3DSA:2.40.128.20 10 173 3.4E-51 T 14-10-2018 IPR012674 Calycin D172_020440 01da653cfc17a3cd620d8f5c2045db03 173 PRINTS PR01171 Bacterial lipocalin signature 68 77 1.8E-33 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 D172_020440 01da653cfc17a3cd620d8f5c2045db03 173 PRINTS PR01171 Bacterial lipocalin signature 162 172 1.8E-33 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 D172_020440 01da653cfc17a3cd620d8f5c2045db03 173 PRINTS PR01171 Bacterial lipocalin signature 135 146 1.8E-33 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 D172_020440 01da653cfc17a3cd620d8f5c2045db03 173 PRINTS PR01171 Bacterial lipocalin signature 49 65 1.8E-33 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 D172_020440 01da653cfc17a3cd620d8f5c2045db03 173 PRINTS PR01171 Bacterial lipocalin signature 102 116 1.8E-33 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 D172_020440 01da653cfc17a3cd620d8f5c2045db03 173 PRINTS PR01171 Bacterial lipocalin signature 32 46 1.8E-33 T 14-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 D172_020440 01da653cfc17a3cd620d8f5c2045db03 173 ProSitePatterns PS00213 Lipocalin signature. 31 44 - T 14-10-2018 IPR022272 Lipocalin family conserved site D172_020440 01da653cfc17a3cd620d8f5c2045db03 173 PIRSF PIRSF036893 3 173 2.6E-40 T 14-10-2018 IPR022271 Lipocalin, ApoD type D172_013960 20cf94235d7afe221883024658e9dae9 400 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 400 51.144 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D172_013960 20cf94235d7afe221883024658e9dae9 400 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 119 130 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D172_013960 20cf94235d7afe221883024658e9dae9 400 Gene3D G3DSA:3.40.50.620 7 175 9.3E-141 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_013960 20cf94235d7afe221883024658e9dae9 400 Gene3D G3DSA:1.20.5.470 366 399 6.2E-9 T 14-10-2018 D172_013960 20cf94235d7afe221883024658e9dae9 400 Gene3D G3DSA:3.90.1260.10 66 354 9.3E-141 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D172_013960 20cf94235d7afe221883024658e9dae9 400 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D172_013960 20cf94235d7afe221883024658e9dae9 400 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 394 3.2E-136 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D172_013960 20cf94235d7afe221883024658e9dae9 400 SUPERFAMILY SSF69864 175 398 4.58E-84 T 14-10-2018 D172_013960 20cf94235d7afe221883024658e9dae9 400 Pfam PF00764 Arginosuccinate synthase 8 394 7.6E-143 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 D172_013960 20cf94235d7afe221883024658e9dae9 400 SUPERFAMILY SSF52402 5 168 1.7E-45 T 14-10-2018 D172_007775 f1b9e73a24f4e38d2dc0491e0399a15b 433 SUPERFAMILY SSF46689 378 424 3.05E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_007775 f1b9e73a24f4e38d2dc0491e0399a15b 433 Pfam PF12833 Helix-turn-helix domain 349 423 3.4E-14 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_007775 f1b9e73a24f4e38d2dc0491e0399a15b 433 Gene3D G3DSA:1.10.10.60 376 427 3.5E-13 T 14-10-2018 D172_007775 f1b9e73a24f4e38d2dc0491e0399a15b 433 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 392 407 5.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D172_007775 f1b9e73a24f4e38d2dc0491e0399a15b 433 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 407 423 5.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D172_007775 f1b9e73a24f4e38d2dc0491e0399a15b 433 SMART SM00342 342 423 9.4E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_007775 f1b9e73a24f4e38d2dc0491e0399a15b 433 Gene3D G3DSA:1.10.10.60 324 375 1.6E-8 T 14-10-2018 D172_007775 f1b9e73a24f4e38d2dc0491e0399a15b 433 SUPERFAMILY SSF46689 326 371 7.88E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_007775 f1b9e73a24f4e38d2dc0491e0399a15b 433 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 379 419 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D172_002945 74b910450f5727bdf26f5aeb6c1a8de9 106 Pfam PF04972 BON domain 42 105 7.4E-12 T 14-10-2018 IPR007055 BON domain D172_007725 c9ec5c81fad4de474fb42f90406011dc 523 PRINTS PR00171 Sugar transporter signature 105 124 1.3E-13 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_007725 c9ec5c81fad4de474fb42f90406011dc 523 PRINTS PR00171 Sugar transporter signature 418 439 1.3E-13 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_007725 c9ec5c81fad4de474fb42f90406011dc 523 PRINTS PR00171 Sugar transporter signature 271 281 1.3E-13 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_007725 c9ec5c81fad4de474fb42f90406011dc 523 PRINTS PR00171 Sugar transporter signature 22 32 1.3E-13 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_007725 c9ec5c81fad4de474fb42f90406011dc 523 PRINTS PR00171 Sugar transporter signature 441 453 1.3E-13 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_007725 c9ec5c81fad4de474fb42f90406011dc 523 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 331 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D172_007725 c9ec5c81fad4de474fb42f90406011dc 523 SUPERFAMILY SSF103473 11 515 2.62E-65 T 14-10-2018 IPR036259 MFS transporter superfamily D172_007725 c9ec5c81fad4de474fb42f90406011dc 523 Pfam PF00083 Sugar (and other) transporter 16 342 4.9E-75 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 D172_007725 c9ec5c81fad4de474fb42f90406011dc 523 Pfam PF00083 Sugar (and other) transporter 415 516 5.0E-25 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 D172_007725 c9ec5c81fad4de474fb42f90406011dc 523 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 6 351 6.1E-76 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_009460 24ca077e6b4fc71ac4137e74a031391e 102 PRINTS PR00355 Adrenodoxin signature 81 89 1.2E-6 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 D172_009460 24ca077e6b4fc71ac4137e74a031391e 102 PRINTS PR00355 Adrenodoxin signature 39 49 1.2E-6 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 D172_009460 24ca077e6b4fc71ac4137e74a031391e 102 PRINTS PR00355 Adrenodoxin signature 58 72 1.2E-6 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 D172_009460 24ca077e6b4fc71ac4137e74a031391e 102 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 89 4.0E-11 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 D172_009460 24ca077e6b4fc71ac4137e74a031391e 102 SUPERFAMILY SSF54292 4 100 4.85E-24 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D172_009460 24ca077e6b4fc71ac4137e74a031391e 102 Gene3D G3DSA:3.10.20.30 1 102 1.7E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily D172_006825 b6a576da01df4cf13ed80f25c85987c8 304 SUPERFAMILY SSF52402 26 254 1.04E-54 T 14-10-2018 D172_006825 b6a576da01df4cf13ed80f25c85987c8 304 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 6 269 55.942 T 14-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 D172_006825 b6a576da01df4cf13ed80f25c85987c8 304 Pfam PF01171 PP-loop family 40 200 3.3E-16 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 D172_006825 b6a576da01df4cf13ed80f25c85987c8 304 Gene3D G3DSA:3.40.50.620 3 264 5.1E-47 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_006825 b6a576da01df4cf13ed80f25c85987c8 304 PIRSF PIRSF004976 2 280 1.9E-76 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 D172_004090 9057e044aae38787a87033b86e63769e 359 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 104 311 1.1E-16 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase D172_004090 9057e044aae38787a87033b86e63769e 359 Gene3D G3DSA:3.60.10.10 99 323 4.4E-21 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D172_004090 9057e044aae38787a87033b86e63769e 359 SUPERFAMILY SSF56219 101 318 2.62E-30 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D172_007895 dde22de14f2e18f08d1dc89cd09dfb09 441 SUPERFAMILY SSF56024 12 184 1.79E-24 T 14-10-2018 D172_007895 dde22de14f2e18f08d1dc89cd09dfb09 441 SUPERFAMILY SSF56024 239 383 1.82E-17 T 14-10-2018 D172_007895 dde22de14f2e18f08d1dc89cd09dfb09 441 Gene3D G3DSA:3.30.870.10 8 437 1.2E-149 T 14-10-2018 D172_007895 dde22de14f2e18f08d1dc89cd09dfb09 441 PIRSF PIRSF000850 3 441 1.7E-158 T 14-10-2018 D172_007895 dde22de14f2e18f08d1dc89cd09dfb09 441 SMART SM00155 122 148 0.022 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 D172_007895 dde22de14f2e18f08d1dc89cd09dfb09 441 SMART SM00155 342 369 42.0 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 D172_007895 dde22de14f2e18f08d1dc89cd09dfb09 441 Gene3D G3DSA:3.30.870.10 14 221 1.2E-149 T 14-10-2018 D172_007895 dde22de14f2e18f08d1dc89cd09dfb09 441 Pfam PF13091 PLD-like domain 30 143 6.4E-8 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 D172_007895 dde22de14f2e18f08d1dc89cd09dfb09 441 Pfam PF13091 PLD-like domain 247 390 5.9E-14 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 D172_000225 a5cd9179189255ca1c62b0d836529bd5 308 SUPERFAMILY SSF110849 49 184 9.42E-35 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily D172_000225 a5cd9179189255ca1c62b0d836529bd5 308 Gene3D G3DSA:1.10.10.2830 127 240 3.3E-33 T 14-10-2018 D172_000225 a5cd9179189255ca1c62b0d836529bd5 308 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 47 218 4.5E-56 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 D172_000225 a5cd9179189255ca1c62b0d836529bd5 308 Gene3D G3DSA:3.90.1530.30 63 126 2.0E-28 T 14-10-2018 D172_000225 a5cd9179189255ca1c62b0d836529bd5 308 SMART SM00470 50 140 1.6E-35 T 14-10-2018 IPR003115 ParB/Sulfiredoxin D172_000225 a5cd9179189255ca1c62b0d836529bd5 308 Pfam PF02195 ParB-like nuclease domain 52 140 2.2E-27 T 14-10-2018 IPR003115 ParB/Sulfiredoxin D172_004110 95f55637c52dd22cd439da29a63b5861 458 Gene3D G3DSA:3.40.309.10 233 423 3.3E-143 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D172_004110 95f55637c52dd22cd439da29a63b5861 458 Pfam PF00171 Aldehyde dehydrogenase family 3 454 6.3E-134 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D172_004110 95f55637c52dd22cd439da29a63b5861 458 Gene3D G3DSA:3.40.605.10 10 449 3.3E-143 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D172_004110 95f55637c52dd22cd439da29a63b5861 458 SUPERFAMILY SSF53720 3 456 6.15E-135 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D172_013260 118c37d9a9c0d0cc335db953e37bc3de 159 Gene3D G3DSA:2.40.50.140 30 143 1.4E-39 T 14-10-2018 D172_013260 118c37d9a9c0d0cc335db953e37bc3de 159 Pfam PF03100 CcmE 4 136 3.9E-44 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 D172_013260 118c37d9a9c0d0cc335db953e37bc3de 159 SUPERFAMILY SSF82093 30 142 3.66E-40 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 D172_013260 118c37d9a9c0d0cc335db953e37bc3de 159 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 31.33 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 D172_017410 7de0fcd83c46059a14ca2988c1ca2198 385 SUPERFAMILY SSF53098 233 382 5.69E-24 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_017410 7de0fcd83c46059a14ca2988c1ca2198 385 Gene3D G3DSA:3.30.420.10 225 384 3.3E-9 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_017410 7de0fcd83c46059a14ca2988c1ca2198 385 Pfam PF00665 Integrase core domain 235 337 3.6E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_017410 7de0fcd83c46059a14ca2988c1ca2198 385 Pfam PF13936 Helix-turn-helix domain 62 102 1.1E-14 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain D172_001290 a86bf6687dbb52f30bbf3e07dc6cce0d 132 SUPERFAMILY SSF54637 1 116 2.31E-29 T 14-10-2018 IPR029069 HotDog domain superfamily D172_001290 a86bf6687dbb52f30bbf3e07dc6cce0d 132 Pfam PF03061 Thioesterase superfamily 17 93 1.2E-8 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 D172_001290 a86bf6687dbb52f30bbf3e07dc6cce0d 132 Gene3D G3DSA:3.10.129.10 1 131 8.0E-28 T 14-10-2018 D172_000135 d2aa1031ed95d04c5dbf4a13eeef5a08 79 SUPERFAMILY SSF64307 3 78 2.22E-26 T 14-10-2018 IPR036868 TusA-like domain superfamily D172_000135 d2aa1031ed95d04c5dbf4a13eeef5a08 79 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 1 79 27.692 T 14-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 D172_000135 d2aa1031ed95d04c5dbf4a13eeef5a08 79 Pfam PF01206 Sulfurtransferase TusA 8 77 5.1E-24 T 14-10-2018 IPR001455 TusA-like domain D172_000135 d2aa1031ed95d04c5dbf4a13eeef5a08 79 Gene3D G3DSA:3.30.110.40 2 78 1.6E-29 T 14-10-2018 IPR036868 TusA-like domain superfamily D172_000135 d2aa1031ed95d04c5dbf4a13eeef5a08 79 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 14-10-2018 IPR001455 TusA-like domain D172_016365 e12f5e9321affc54abc891d27a27069a 135 Pfam PF11528 Protein of unknown function (DUF3224) 7 130 2.0E-43 T 14-10-2018 IPR021607 Protein of unknown function DUF3224 D172_016365 e12f5e9321affc54abc891d27a27069a 135 SUPERFAMILY SSF159238 5 133 3.79E-44 T 14-10-2018 IPR023159 SO1590-like superfamily D172_016365 e12f5e9321affc54abc891d27a27069a 135 Gene3D G3DSA:2.40.350.10 2 135 1.9E-50 T 14-10-2018 IPR023159 SO1590-like superfamily D172_020670 a143976b693ed4862e33e32445a0058b 437 Gene3D G3DSA:3.30.565.10 277 432 1.3E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_020670 a143976b693ed4862e33e32445a0058b 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 387 2.7E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_020670 a143976b693ed4862e33e32445a0058b 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 373 2.7E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_020670 a143976b693ed4862e33e32445a0058b 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 2.7E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_020670 a143976b693ed4862e33e32445a0058b 437 SMART SM00388 213 278 2.7E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_020670 a143976b693ed4862e33e32445a0058b 437 Pfam PF08521 Two-component sensor kinase N-terminal 56 134 9.0E-5 T 14-10-2018 IPR013727 Two-component sensor kinase, N-terminal D172_020670 a143976b693ed4862e33e32445a0058b 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 430 1.3E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_020670 a143976b693ed4862e33e32445a0058b 437 Gene3D G3DSA:1.10.287.130 164 276 7.5E-17 T 14-10-2018 D172_020670 a143976b693ed4862e33e32445a0058b 437 SUPERFAMILY SSF55874 268 431 1.44E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_020670 a143976b693ed4862e33e32445a0058b 437 SUPERFAMILY SSF47384 197 277 8.04E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_020670 a143976b693ed4862e33e32445a0058b 437 SMART SM00387 322 435 5.7E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_020670 a143976b693ed4862e33e32445a0058b 437 Pfam PF00512 His Kinase A (phospho-acceptor) domain 216 276 7.0E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 Gene3D G3DSA:3.40.50.670 402 591 1.3E-72 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 808 0.0 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 SUPERFAMILY SSF54211 221 396 1.9E-57 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_000160 8aae6f62adb0c235e24c799c582397a9 808 Gene3D G3DSA:3.30.565.10 1 220 6.4E-92 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_000160 8aae6f62adb0c235e24c799c582397a9 808 SMART SM00433 35 801 7.4E-270 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 ProSitePatterns PS00177 DNA topoisomerase II signature. 426 434 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 Gene3D G3DSA:3.40.50.670 702 806 3.5E-25 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 Gene3D G3DSA:3.10.20.690 596 687 5.2E-27 T 14-10-2018 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 Pfam PF00204 DNA gyrase B 221 394 5.7E-60 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 SMART SM00387 31 175 9.8E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_000160 8aae6f62adb0c235e24c799c582397a9 808 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 171 9.2E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_000160 8aae6f62adb0c235e24c799c582397a9 808 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 737 797 6.5E-30 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR01159 DNA gyrase subunit B signature 195 208 4.3E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR01159 DNA gyrase subunit B signature 474 483 4.3E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR01159 DNA gyrase subunit B signature 364 378 4.3E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR01159 DNA gyrase subunit B signature 378 398 4.3E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR01159 DNA gyrase subunit B signature 5 15 4.3E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR01159 DNA gyrase subunit B signature 777 793 4.3E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR01159 DNA gyrase subunit B signature 220 242 4.3E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR01159 DNA gyrase subunit B signature 316 332 4.3E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR01159 DNA gyrase subunit B signature 761 773 4.3E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR01159 DNA gyrase subunit B signature 180 195 4.3E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR01159 DNA gyrase subunit B signature 244 262 4.3E-86 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 Pfam PF01751 Toprim domain 423 535 8.1E-19 T 14-10-2018 IPR006171 TOPRIM domain D172_000160 8aae6f62adb0c235e24c799c582397a9 808 Gene3D G3DSA:3.30.230.10 221 396 7.8E-73 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D172_000160 8aae6f62adb0c235e24c799c582397a9 808 SUPERFAMILY SSF56719 398 799 5.23E-87 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 808 105.21 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 SUPERFAMILY SSF55874 4 212 2.36E-72 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR00418 DNA topoisomerase II family signature 270 283 4.3E-71 T 14-10-2018 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR00418 DNA topoisomerase II family signature 529 541 4.3E-71 T 14-10-2018 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR00418 DNA topoisomerase II family signature 113 127 4.3E-71 T 14-10-2018 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR00418 DNA topoisomerase II family signature 491 507 4.3E-71 T 14-10-2018 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR00418 DNA topoisomerase II family signature 70 83 4.3E-71 T 14-10-2018 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR00418 DNA topoisomerase II family signature 424 438 4.3E-71 T 14-10-2018 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR00418 DNA topoisomerase II family signature 35 50 4.3E-71 T 14-10-2018 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR00418 DNA topoisomerase II family signature 740 756 4.3E-71 T 14-10-2018 D172_000160 8aae6f62adb0c235e24c799c582397a9 808 PRINTS PR00418 DNA topoisomerase II family signature 509 526 4.3E-71 T 14-10-2018 D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 SUPERFAMILY SSF82693 46 137 2.62E-18 T 14-10-2018 D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 Gene3D G3DSA:1.20.1640.10 15 507 3.2E-258 T 14-10-2018 D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 6.3E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 6.3E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 6.3E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 6.3E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 6.3E-21 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 SUPERFAMILY SSF82693 141 325 4.97E-11 T 14-10-2018 D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 SUPERFAMILY SSF82714 183 267 7.59E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 Pfam PF00873 AcrB/AcrD/AcrF family 9 1023 1.5E-157 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 SUPERFAMILY SSF82866 798 1025 1.44E-45 T 14-10-2018 D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 SUPERFAMILY SSF82866 292 490 1.44E-31 T 14-10-2018 D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 SUPERFAMILY SSF82714 726 799 6.02E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 Gene3D G3DSA:3.30.70.1320 138 327 3.2E-258 T 14-10-2018 D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 Gene3D G3DSA:3.30.2090.10 179 270 3.2E-258 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 Gene3D G3DSA:3.30.70.1430 45 810 3.2E-258 T 14-10-2018 D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 Gene3D G3DSA:3.30.70.1440 665 863 3.2E-258 T 14-10-2018 D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 Gene3D G3DSA:3.30.70.1430 565 664 3.2E-258 T 14-10-2018 D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 Gene3D G3DSA:3.30.2090.10 715 802 3.2E-258 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_010795 4c5726bcd34f1171dee8bcb98544d6ea 1049 Gene3D G3DSA:1.20.1640.10 508 1020 3.2E-258 T 14-10-2018 D172_003895 9b2bd0151f2532070ecba862ebf1c32f 256 SUPERFAMILY SSF52833 36 255 2.24E-50 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_003895 9b2bd0151f2532070ecba862ebf1c32f 256 Pfam PF06764 Protein of unknown function (DUF1223) 42 240 1.8E-43 T 14-10-2018 IPR010634 Protein of unknown function DUF1223 D172_009510 2dd1e1e2b1a6fd53ebb9ce5e984b606e 182 SUPERFAMILY SSF55469 2 181 8.51E-38 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 D172_009510 2dd1e1e2b1a6fd53ebb9ce5e984b606e 182 Pfam PF00881 Nitroreductase family 8 161 4.4E-21 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 D172_009510 2dd1e1e2b1a6fd53ebb9ce5e984b606e 182 Gene3D G3DSA:3.40.109.10 2 181 1.2E-36 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 D172_009510 2dd1e1e2b1a6fd53ebb9ce5e984b606e 182 PIRSF PIRSF000232 1 182 7.5E-57 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like D172_008320 f001a5dee8e1635c8a860c70944403c7 408 Pfam PF00266 Aminotransferase class-V 28 396 7.4E-129 T 14-10-2018 IPR000192 Aminotransferase class V domain D172_008320 f001a5dee8e1635c8a860c70944403c7 408 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 219 238 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site D172_008320 f001a5dee8e1635c8a860c70944403c7 408 Gene3D G3DSA:3.90.1150.10 11 400 6.8E-150 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_008320 f001a5dee8e1635c8a860c70944403c7 408 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 10 406 2.3E-152 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 D172_008320 f001a5dee8e1635c8a860c70944403c7 408 SUPERFAMILY SSF53383 6 404 5.51E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_008320 f001a5dee8e1635c8a860c70944403c7 408 Gene3D G3DSA:3.40.640.10 39 298 6.8E-150 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_009090 7d6fb91e26c67f5acd15c822f43819d9 341 Pfam PF06166 Protein of unknown function (DUF979) 20 339 7.3E-120 T 14-10-2018 IPR009323 Protein of unknown function DUF979 D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 Pfam PF13855 Leucine rich repeat 128 184 2.0E-7 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 Pfam PF13855 Leucine rich repeat 24 71 3.8E-8 T 14-10-2018 IPR001611 Leucine-rich repeat GO:0005515 D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 Pfam PF00069 Protein kinase domain 204 366 1.3E-17 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 SMART SM00369 150 172 49.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 SMART SM00369 102 125 140.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 SMART SM00369 58 81 3.2 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 SMART SM00369 126 149 25.0 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 SMART SM00369 38 57 4.8 T 14-10-2018 IPR003591 Leucine-rich repeat, typical subtype D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 SUPERFAMILY SSF52058 4 187 9.18E-34 T 14-10-2018 D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 Gene3D G3DSA:3.80.10.10 3 96 4.7E-17 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 Gene3D G3DSA:3.80.10.10 97 198 3.2E-19 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 SMART SM00364 103 122 23.0 T 14-10-2018 D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 SMART SM00364 128 145 180.0 T 14-10-2018 D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 SMART SM00364 35 54 9.7 T 14-10-2018 D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 210 231 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 Gene3D G3DSA:3.30.200.20 201 284 3.2E-8 T 14-10-2018 D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 SUPERFAMILY SSF56112 202 427 8.45E-27 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily D172_009755 8eb65b6bddc863a26f1f3803db29eabc 428 Gene3D G3DSA:1.10.510.10 296 428 8.7E-11 T 14-10-2018 D172_013840 f26dc1f30be1c76278a5f64b656c731a 397 SUPERFAMILY SSF109604 142 314 3.81E-34 T 14-10-2018 D172_013840 f26dc1f30be1c76278a5f64b656c731a 397 Pfam PF11871 Domain of unknown function (DUF3391) 1 121 1.4E-20 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 D172_013840 f26dc1f30be1c76278a5f64b656c731a 397 Gene3D G3DSA:1.10.3210.10 6 316 2.4E-75 T 14-10-2018 D172_013840 f26dc1f30be1c76278a5f64b656c731a 397 SMART SM00471 149 284 5.2E-11 T 14-10-2018 IPR003607 HD/PDEase domain D172_013840 f26dc1f30be1c76278a5f64b656c731a 397 Pfam PF01966 HD domain 154 274 5.4E-17 T 14-10-2018 IPR006674 HD domain D172_013840 f26dc1f30be1c76278a5f64b656c731a 397 TIGRFAM TIGR00277 HDIG: HDIG domain 153 243 1.5E-9 T 14-10-2018 IPR006675 HDIG domain D172_012690 a20d41d3ed8f1d6a671897ec9c575c64 275 Gene3D G3DSA:1.10.166.10 1 70 7.3E-29 T 14-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 D172_012690 a20d41d3ed8f1d6a671897ec9c575c64 275 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 56.591 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 D172_012690 a20d41d3ed8f1d6a671897ec9c575c64 275 Gene3D G3DSA:2.160.10.10 87 257 1.4E-56 T 14-10-2018 D172_012690 a20d41d3ed8f1d6a671897ec9c575c64 275 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 1.7E-13 T 14-10-2018 IPR001451 Hexapeptide repeat D172_012690 a20d41d3ed8f1d6a671897ec9c575c64 275 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D172_012690 a20d41d3ed8f1d6a671897ec9c575c64 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 166 0.0021 T 14-10-2018 IPR001451 Hexapeptide repeat D172_012690 a20d41d3ed8f1d6a671897ec9c575c64 275 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 273 8.0E-146 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 D172_012690 a20d41d3ed8f1d6a671897ec9c575c64 275 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 69 8.0E-25 T 14-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 D172_012690 a20d41d3ed8f1d6a671897ec9c575c64 275 SUPERFAMILY SSF51161 2 256 9.7E-75 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily D172_000320 79bab51b819c9475486a5abed0adbb79 597 SUPERFAMILY SSF50969 167 596 1.33E-16 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like D172_000320 79bab51b819c9475486a5abed0adbb79 597 Gene3D G3DSA:2.130.10.10 44 315 7.8E-11 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_014935 8080c2b7540c9bbb668619a61f2e11e3 483 SUPERFAMILY SSF51984 20 105 1.96E-27 T 14-10-2018 D172_014935 8080c2b7540c9bbb668619a61f2e11e3 483 Gene3D G3DSA:3.40.50.720 19 106 5.5E-31 T 14-10-2018 D172_014935 8080c2b7540c9bbb668619a61f2e11e3 483 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 468 1.5E-173 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_014935 8080c2b7540c9bbb668619a61f2e11e3 483 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 18 474 42.019 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_014935 8080c2b7540c9bbb668619a61f2e11e3 483 Pfam PF01225 Mur ligase family, catalytic domain 20 117 1.2E-28 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 D172_014935 8080c2b7540c9bbb668619a61f2e11e3 483 SUPERFAMILY SSF53623 104 321 8.11E-71 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D172_014935 8080c2b7540c9bbb668619a61f2e11e3 483 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 412 7.6E-21 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 D172_014935 8080c2b7540c9bbb668619a61f2e11e3 483 Gene3D G3DSA:3.90.190.20 321 480 6.4E-47 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D172_014935 8080c2b7540c9bbb668619a61f2e11e3 483 Gene3D G3DSA:3.40.1190.10 107 320 4.1E-80 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 D172_014935 8080c2b7540c9bbb668619a61f2e11e3 483 SUPERFAMILY SSF53244 322 468 3.66E-46 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 D172_014935 8080c2b7540c9bbb668619a61f2e11e3 483 Pfam PF08245 Mur ligase middle domain 123 303 5.8E-30 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 D172_008580 b7a50f3f3364a49e0fc8a9d919ad6616 175 Gene3D G3DSA:3.10.180.10 2 172 9.9E-62 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_008580 b7a50f3f3364a49e0fc8a9d919ad6616 175 ProSitePatterns PS00935 Glyoxalase I signature 2. 106 122 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 D172_008580 b7a50f3f3364a49e0fc8a9d919ad6616 175 ProSitePatterns PS00934 Glyoxalase I signature 1. 22 43 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 D172_008580 b7a50f3f3364a49e0fc8a9d919ad6616 175 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 22 162 4.5E-21 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D172_008580 b7a50f3f3364a49e0fc8a9d919ad6616 175 SUPERFAMILY SSF54593 20 165 1.01E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_008580 b7a50f3f3364a49e0fc8a9d919ad6616 175 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 11 170 6.5E-58 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 D172_004990 b5b27145eea28e9db0d25e14e49366cd 485 SUPERFAMILY SSF53383 115 483 4.9E-79 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_004990 b5b27145eea28e9db0d25e14e49366cd 485 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 1.9E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_004990 b5b27145eea28e9db0d25e14e49366cd 485 SMART SM00345 19 78 1.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_004990 b5b27145eea28e9db0d25e14e49366cd 485 Gene3D G3DSA:1.10.10.10 5 79 1.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_004990 b5b27145eea28e9db0d25e14e49366cd 485 Gene3D G3DSA:3.40.640.10 112 479 3.2E-90 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_004990 b5b27145eea28e9db0d25e14e49366cd 485 SUPERFAMILY SSF46785 11 81 1.85E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_004990 b5b27145eea28e9db0d25e14e49366cd 485 Pfam PF00155 Aminotransferase class I and II 150 475 2.3E-27 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D172_002270 5e807bb0fc834502ee8e9aaa70c83eef 274 SUPERFAMILY SSF161111 2 185 8.63E-46 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily D172_002270 5e807bb0fc834502ee8e9aaa70c83eef 274 Gene3D G3DSA:1.20.1510.10 1 184 3.9E-48 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily D172_002270 5e807bb0fc834502ee8e9aaa70c83eef 274 Gene3D G3DSA:3.30.70.1350 185 269 3.6E-25 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 D172_002270 5e807bb0fc834502ee8e9aaa70c83eef 274 Pfam PF16916 Dimerisation domain of Zinc Transporter 188 265 1.4E-21 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain D172_002270 5e807bb0fc834502ee8e9aaa70c83eef 274 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 2 266 3.6E-57 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 D172_002270 5e807bb0fc834502ee8e9aaa70c83eef 274 SUPERFAMILY SSF160240 188 266 2.22E-19 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 D172_002270 5e807bb0fc834502ee8e9aaa70c83eef 274 Pfam PF01545 Cation efflux family 2 184 1.5E-34 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 D172_008305 5e5a1a5c92764909c102ee3921748f68 226 SUPERFAMILY SSF55120 9 195 2.08E-43 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_008305 5e5a1a5c92764909c102ee3921748f68 226 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 52 66 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_008305 5e5a1a5c92764909c102ee3921748f68 226 Pfam PF00849 RNA pseudouridylate synthase 18 158 1.1E-21 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_008305 5e5a1a5c92764909c102ee3921748f68 226 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 9 219 3.1E-74 T 14-10-2018 IPR006508 Pseudouridine synthase, RluA-like D172_008305 5e5a1a5c92764909c102ee3921748f68 226 Gene3D G3DSA:3.30.2350.10 2 199 6.3E-42 T 14-10-2018 D172_014600 cbaa6da5f43ca7c4842b314c90bc04c9 381 SUPERFAMILY SSF56796 3 379 6.28E-93 T 14-10-2018 D172_014600 cbaa6da5f43ca7c4842b314c90bc04c9 381 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 351 2.6E-77 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 D172_014600 cbaa6da5f43ca7c4842b314c90bc04c9 381 Gene3D G3DSA:1.20.1090.10 181 380 4.7E-30 T 14-10-2018 D172_014600 cbaa6da5f43ca7c4842b314c90bc04c9 381 Gene3D G3DSA:3.40.50.1970 1 180 3.8E-47 T 14-10-2018 D172_016765 88dc417346b3fbae06d3fb8bf399ce20 329 SUPERFAMILY SSF53474 24 297 7.47E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_016765 88dc417346b3fbae06d3fb8bf399ce20 329 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 224 265 - T 14-10-2018 IPR000952 AB hydrolase 4, conserved site D172_016765 88dc417346b3fbae06d3fb8bf399ce20 329 PIRSF PIRSF005211 1 329 1.9E-112 T 14-10-2018 IPR012020 AB hydrolase 4 family D172_016765 88dc417346b3fbae06d3fb8bf399ce20 329 Pfam PF00561 alpha/beta hydrolase fold 61 299 2.3E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_016765 88dc417346b3fbae06d3fb8bf399ce20 329 Gene3D G3DSA:3.40.50.1820 24 312 2.5E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_017990 0592628421d06fa8d6201195983aab88 305 Gene3D G3DSA:3.40.1190.20 11 299 4.9E-81 T 14-10-2018 IPR029056 Ribokinase-like D172_017990 0592628421d06fa8d6201195983aab88 305 SUPERFAMILY SSF53613 13 302 2.18E-55 T 14-10-2018 IPR029056 Ribokinase-like D172_017990 0592628421d06fa8d6201195983aab88 305 Pfam PF00294 pfkB family carbohydrate kinase 18 292 9.8E-49 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB D172_014670 8aef2a07292fab00f67628285b405ede 114 Gene3D G3DSA:2.30.42.10 30 111 6.2E-10 T 14-10-2018 D172_014670 8aef2a07292fab00f67628285b405ede 114 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 23 97 7.1E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 D172_014670 8aef2a07292fab00f67628285b405ede 114 SMART SM00228 25 101 0.0015 T 14-10-2018 IPR001478 PDZ domain GO:0005515 D172_014670 8aef2a07292fab00f67628285b405ede 114 SUPERFAMILY SSF50156 29 105 1.84E-11 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 D172_007510 9d777950c7bfe16e78e4cc293700f217 145 Gene3D G3DSA:2.60.120.10 37 145 1.3E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_007510 9d777950c7bfe16e78e4cc293700f217 145 SUPERFAMILY SSF51182 35 140 2.1E-22 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily D172_007510 9d777950c7bfe16e78e4cc293700f217 145 Pfam PF07883 Cupin domain 72 140 7.0E-17 T 14-10-2018 IPR013096 Cupin 2, conserved barrel D172_019185 3aa020465e282f46f2d37090a50b61bf 209 SUPERFAMILY SSF53271 3 207 5.9E-66 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like D172_019185 3aa020465e282f46f2d37090a50b61bf 209 Gene3D G3DSA:3.40.50.2020 1 208 1.8E-69 T 14-10-2018 D172_019185 3aa020465e282f46f2d37090a50b61bf 209 Pfam PF14681 Uracil phosphoribosyltransferase 5 208 6.5E-64 T 14-10-2018 D172_019185 3aa020465e282f46f2d37090a50b61bf 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 3.0E-84 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 D172_019185 3aa020465e282f46f2d37090a50b61bf 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 209 42.609 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 D172_005385 a563a04bc87cd2fabc6699ae38cadc24 539 Pfam PF10995 GGDEF I-site like or GIL domain 168 480 1.7E-95 T 14-10-2018 IPR017745 BcsE, GIL domain GO:0035438 D172_005385 a563a04bc87cd2fabc6699ae38cadc24 539 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 163 481 1.2E-109 T 14-10-2018 IPR017745 BcsE, GIL domain GO:0035438 D172_007205 9d5f4bfbe6ec527a86d1cff98075dc0b 99 SUPERFAMILY SSF54285 19 99 2.8E-17 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp D172_007205 9d5f4bfbe6ec527a86d1cff98075dc0b 99 Pfam PF02597 ThiS family 22 99 4.6E-16 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 D172_007205 9d5f4bfbe6ec527a86d1cff98075dc0b 99 Gene3D G3DSA:3.10.20.30 19 99 4.6E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily D172_012605 52573d96cae79c8398c767cf7ee368a7 581 Pfam PF00664 ABC transporter transmembrane region 23 286 6.2E-11 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D172_012605 52573d96cae79c8398c767cf7ee368a7 581 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_012605 52573d96cae79c8398c767cf7ee368a7 581 SMART SM00382 367 557 7.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_012605 52573d96cae79c8398c767cf7ee368a7 581 SUPERFAMILY SSF90123 6 318 8.89E-38 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D172_012605 52573d96cae79c8398c767cf7ee368a7 581 Gene3D G3DSA:1.20.1560.10 4 320 1.9E-29 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D172_012605 52573d96cae79c8398c767cf7ee368a7 581 SUPERFAMILY SSF52540 339 578 1.9E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_012605 52573d96cae79c8398c767cf7ee368a7 581 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 541 7.3E-118 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 D172_012605 52573d96cae79c8398c767cf7ee368a7 581 Pfam PF00005 ABC transporter 358 510 1.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_012605 52573d96cae79c8398c767cf7ee368a7 581 Gene3D G3DSA:3.40.50.300 328 579 3.1E-70 T 14-10-2018 D172_019860 a72ac7a272b6d3fa2007ec14670e04e0 87 Gene3D G3DSA:3.30.1070.10 1 83 9.7E-29 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 D172_019860 a72ac7a272b6d3fa2007ec14670e04e0 87 SUPERFAMILY SSF55229 33 85 3.14E-17 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 D172_019860 a72ac7a272b6d3fa2007ec14670e04e0 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 2 83 1.9E-31 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 D172_019860 a72ac7a272b6d3fa2007ec14670e04e0 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 19.913 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 D172_019860 a72ac7a272b6d3fa2007ec14670e04e0 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 5.3E-26 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 D172_007920 185e5370b68b279e6c52ecf93c956626 447 Pfam PF16193 AAA C-terminal domain 186 265 7.1E-25 T 14-10-2018 IPR032423 AAA C-terminal domain D172_007920 185e5370b68b279e6c52ecf93c956626 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 266 432 3.2E-65 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal D172_007920 185e5370b68b279e6c52ecf93c956626 447 SMART SM00382 48 165 1.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_007920 185e5370b68b279e6c52ecf93c956626 447 Gene3D G3DSA:1.10.3710.10 344 445 7.3E-37 T 14-10-2018 D172_007920 185e5370b68b279e6c52ecf93c956626 447 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 17 135 1.1E-15 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 D172_007920 185e5370b68b279e6c52ecf93c956626 447 Gene3D G3DSA:3.40.50.300 10 164 6.8E-44 T 14-10-2018 D172_007920 185e5370b68b279e6c52ecf93c956626 447 SUPERFAMILY SSF48019 250 432 1.47E-72 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 D172_007920 185e5370b68b279e6c52ecf93c956626 447 Gene3D G3DSA:1.10.8.60 165 238 1.3E-12 T 14-10-2018 D172_007920 185e5370b68b279e6c52ecf93c956626 447 Gene3D G3DSA:1.20.272.10 241 343 5.7E-42 T 14-10-2018 D172_007920 185e5370b68b279e6c52ecf93c956626 447 SUPERFAMILY SSF52540 12 239 1.54E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_020615 03a20aed34bfa59eabc99a95cbef76e5 243 SUPERFAMILY SSF88713 1 240 3.34E-88 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 D172_020615 03a20aed34bfa59eabc99a95cbef76e5 243 Gene3D G3DSA:3.20.20.370 1 243 1.7E-94 T 14-10-2018 D172_020615 03a20aed34bfa59eabc99a95cbef76e5 243 Pfam PF03746 LamB/YcsF family 2 238 1.5E-90 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 D172_010010 3bb9c615a8adadf831cbdc36888543f4 155 Pfam PF05433 Glycine zipper 2TM domain 59 96 9.8E-9 T 14-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 D172_002840 663beea7ef618ae57f6c4bc706191fdb 190 SUPERFAMILY SSF50182 101 166 3.92E-9 T 14-10-2018 IPR010920 LSM domain superfamily D172_002840 663beea7ef618ae57f6c4bc706191fdb 190 Pfam PF00924 Mechanosensitive ion channel 56 166 4.5E-11 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 D172_009480 ce1f3dac8bffcc5e28dd4e1f9d888020 763 Gene3D G3DSA:2.60.120.430 32 212 9.5E-53 T 14-10-2018 D172_009480 ce1f3dac8bffcc5e28dd4e1f9d888020 763 SUPERFAMILY SSF51445 443 753 5.98E-26 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_009480 ce1f3dac8bffcc5e28dd4e1f9d888020 763 Gene3D G3DSA:3.20.20.80 214 757 3.4E-188 T 14-10-2018 D172_009480 ce1f3dac8bffcc5e28dd4e1f9d888020 763 Pfam PF02449 Beta-galactosidase 474 642 2.1E-4 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 D172_000015 7231c159dccf23b17034d81661fb5db4 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 128 7.8E-6 T 14-10-2018 IPR001451 Hexapeptide repeat D172_000015 7231c159dccf23b17034d81661fb5db4 181 Gene3D G3DSA:2.160.10.10 2 180 5.1E-52 T 14-10-2018 D172_000015 7231c159dccf23b17034d81661fb5db4 181 SUPERFAMILY SSF51161 3 174 5.41E-44 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily D172_015510 f324caf7c9d0ae6ecd88436568440f41 163 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site D172_015510 f324caf7c9d0ae6ecd88436568440f41 163 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 2.7E-45 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type D172_015510 f324caf7c9d0ae6ecd88436568440f41 163 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 135 1.6E-64 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 D172_015510 f324caf7c9d0ae6ecd88436568440f41 163 SUPERFAMILY SSF46785 2 133 4.65E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_015510 f324caf7c9d0ae6ecd88436568440f41 163 Gene3D G3DSA:1.10.10.10 1 145 9.0E-53 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_015510 f324caf7c9d0ae6ecd88436568440f41 163 Pfam PF02082 Transcriptional regulator 1 83 9.0E-27 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 Gene3D G3DSA:3.30.70.240 390 483 1.9E-127 T 14-10-2018 D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 SUPERFAMILY SSF54980 303 388 1.65E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 Gene3D G3DSA:3.30.70.870 307 591 1.9E-127 T 14-10-2018 D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 SUPERFAMILY SSF50447 152 300 1.02E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 Pfam PF00009 Elongation factor Tu GTP binding domain 5 195 7.3E-56 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 Gene3D G3DSA:3.40.50.300 2 199 4.2E-68 T 14-10-2018 D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 600 1.2E-284 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 Pfam PF03144 Elongation factor Tu domain 2 220 290 3.7E-8 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 Gene3D G3DSA:2.40.50.250 484 600 1.9E-127 T 14-10-2018 D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 PRINTS PR00315 GTP-binding elongation factor signature 72 82 1.7E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 PRINTS PR00315 GTP-binding elongation factor signature 8 21 1.7E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 PRINTS PR00315 GTP-binding elongation factor signature 52 60 1.7E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 PRINTS PR00315 GTP-binding elongation factor signature 88 99 1.7E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 PRINTS PR00315 GTP-binding elongation factor signature 124 133 1.7E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 SUPERFAMILY SSF52540 2 220 1.15E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 Pfam PF00679 Elongation factor G C-terminus 397 477 6.9E-22 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 Gene3D G3DSA:2.40.30.10 200 300 1.2E-29 T 14-10-2018 D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 135 5.3E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D172_001170 1d34a91f8228e7d8103a664596fd0d0d 607 SUPERFAMILY SSF54980 399 513 2.21E-27 T 14-10-2018 IPR035647 EF-G domain III/V-like D172_019760 f9e2e7173030ce83fcc96ecb7f16c18b 259 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 4.0E-99 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 D172_019760 f9e2e7173030ce83fcc96ecb7f16c18b 259 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 41.534 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 D172_019760 f9e2e7173030ce83fcc96ecb7f16c18b 259 Pfam PF00977 Histidine biosynthesis protein 5 239 4.1E-73 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 D172_019760 f9e2e7173030ce83fcc96ecb7f16c18b 259 SUPERFAMILY SSF51366 1 256 3.22E-69 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D172_019760 f9e2e7173030ce83fcc96ecb7f16c18b 259 Gene3D G3DSA:3.20.20.70 1 259 2.0E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_016410 b85e595556ed46cddaa6da5cb5b69322 287 Gene3D G3DSA:2.30.140.10 6 60 6.6E-20 T 14-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 D172_016410 b85e595556ed46cddaa6da5cb5b69322 287 Pfam PF01564 Spermine/spermidine synthase domain 65 244 6.5E-50 T 14-10-2018 D172_016410 b85e595556ed46cddaa6da5cb5b69322 287 Pfam PF17284 Spermidine synthase tetramerisation domain 9 59 1.8E-15 T 14-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 D172_016410 b85e595556ed46cddaa6da5cb5b69322 287 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 8 285 35.66 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 D172_016410 b85e595556ed46cddaa6da5cb5b69322 287 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 85 98 - T 14-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 D172_016410 b85e595556ed46cddaa6da5cb5b69322 287 TIGRFAM TIGR00417 speE: spermidine synthase 9 279 1.5E-80 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 D172_016410 b85e595556ed46cddaa6da5cb5b69322 287 Gene3D G3DSA:3.40.50.150 61 285 7.9E-62 T 14-10-2018 D172_016410 b85e595556ed46cddaa6da5cb5b69322 287 SUPERFAMILY SSF53335 15 285 1.86E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_020070 5b86c9a9b5c7b5d6ffe2a9d1adae6208 468 PRINTS PR00175 Sodium/alanine symporter signature 302 320 6.6E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_020070 5b86c9a9b5c7b5d6ffe2a9d1adae6208 468 PRINTS PR00175 Sodium/alanine symporter signature 209 228 6.6E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_020070 5b86c9a9b5c7b5d6ffe2a9d1adae6208 468 PRINTS PR00175 Sodium/alanine symporter signature 408 428 6.6E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_020070 5b86c9a9b5c7b5d6ffe2a9d1adae6208 468 PRINTS PR00175 Sodium/alanine symporter signature 347 369 6.6E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_020070 5b86c9a9b5c7b5d6ffe2a9d1adae6208 468 PRINTS PR00175 Sodium/alanine symporter signature 90 112 6.6E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_020070 5b86c9a9b5c7b5d6ffe2a9d1adae6208 468 PRINTS PR00175 Sodium/alanine symporter signature 181 199 6.6E-52 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_020070 5b86c9a9b5c7b5d6ffe2a9d1adae6208 468 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 90 105 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_020070 5b86c9a9b5c7b5d6ffe2a9d1adae6208 468 TIGRFAM TIGR00835 agcS: amino acid carrier protein 19 439 6.5E-135 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_020070 5b86c9a9b5c7b5d6ffe2a9d1adae6208 468 Pfam PF01235 Sodium:alanine symporter family 53 451 1.8E-145 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_005360 3b9620f79d34b076bb0f7d534d64cf2b 376 Gene3D G3DSA:1.50.10.10 26 371 3.3E-116 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 D172_005360 3b9620f79d34b076bb0f7d534d64cf2b 376 SUPERFAMILY SSF48208 2 362 6.32E-99 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 D172_005360 3b9620f79d34b076bb0f7d534d64cf2b 376 PRINTS PR00735 Glycosyl hydrolase family 8 signature 118 136 2.8E-14 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 D172_005360 3b9620f79d34b076bb0f7d534d64cf2b 376 PRINTS PR00735 Glycosyl hydrolase family 8 signature 184 201 2.8E-14 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 D172_005360 3b9620f79d34b076bb0f7d534d64cf2b 376 PRINTS PR00735 Glycosyl hydrolase family 8 signature 247 256 2.8E-14 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 D172_005360 3b9620f79d34b076bb0f7d534d64cf2b 376 PRINTS PR00735 Glycosyl hydrolase family 8 signature 222 233 2.8E-14 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 D172_005360 3b9620f79d34b076bb0f7d534d64cf2b 376 PRINTS PR00735 Glycosyl hydrolase family 8 signature 56 69 2.8E-14 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 D172_005360 3b9620f79d34b076bb0f7d534d64cf2b 376 PRINTS PR00735 Glycosyl hydrolase family 8 signature 342 356 2.8E-14 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 D172_005360 3b9620f79d34b076bb0f7d534d64cf2b 376 Pfam PF01270 Glycosyl hydrolases family 8 10 352 2.8E-65 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 D172_015635 7d7bda92fab11020fcf5d5b30138545f 148 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 11 145 1.5E-33 T 14-10-2018 IPR011747 Conserved hypothetical protein CHP02241 D172_015635 7d7bda92fab11020fcf5d5b30138545f 148 Pfam PF06841 T4-like virus tail tube protein gp19 17 142 1.4E-31 T 14-10-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 D172_013095 bc8e396c4cbca4d35e13e8c7a167b6b5 148 SUPERFAMILY SSF55729 4 147 9.75E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_013095 bc8e396c4cbca4d35e13e8c7a167b6b5 148 Pfam PF13673 Acetyltransferase (GNAT) domain 50 146 5.7E-17 T 14-10-2018 IPR000182 GNAT domain D172_013095 bc8e396c4cbca4d35e13e8c7a167b6b5 148 Gene3D G3DSA:3.40.630.30 1 145 7.1E-37 T 14-10-2018 D172_009325 513809a7bcd2bd986cb3589e55442134 302 Pfam PF00294 pfkB family carbohydrate kinase 11 290 2.0E-42 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB D172_009325 513809a7bcd2bd986cb3589e55442134 302 SUPERFAMILY SSF53613 1 293 7.17E-59 T 14-10-2018 IPR029056 Ribokinase-like D172_009325 513809a7bcd2bd986cb3589e55442134 302 Gene3D G3DSA:3.40.1190.20 1 295 2.8E-64 T 14-10-2018 IPR029056 Ribokinase-like D172_002285 d96629582e9c9d2e5fb19f27c6777b37 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 5.3E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_002285 d96629582e9c9d2e5fb19f27c6777b37 229 SMART SM00448 1 111 6.9E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_002285 d96629582e9c9d2e5fb19f27c6777b37 229 SMART SM00862 150 225 2.4E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_002285 d96629582e9c9d2e5fb19f27c6777b37 229 Gene3D G3DSA:1.10.10.10 121 228 3.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_002285 d96629582e9c9d2e5fb19f27c6777b37 229 SUPERFAMILY SSF52172 1 188 2.56E-39 T 14-10-2018 IPR011006 CheY-like superfamily D172_002285 d96629582e9c9d2e5fb19f27c6777b37 229 Gene3D G3DSA:3.40.50.2300 1 120 2.4E-35 T 14-10-2018 D172_002285 d96629582e9c9d2e5fb19f27c6777b37 229 Pfam PF00072 Response regulator receiver domain 4 112 7.8E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_006855 5eec2b867d979f647e35e1cf568f17f5 163 Pfam PF05751 FixH 8 148 2.0E-38 T 14-10-2018 IPR008620 Nitrogen fixation protein FixH D172_009295 1021473d87c6a6388cc3a6aa92617d13 424 Pfam PF00722 Glycosyl hydrolases family 16 70 163 9.9E-9 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 D172_009295 1021473d87c6a6388cc3a6aa92617d13 424 Pfam PF00722 Glycosyl hydrolases family 16 328 414 2.2E-8 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 D172_009295 1021473d87c6a6388cc3a6aa92617d13 424 Gene3D G3DSA:2.60.120.200 18 201 1.9E-22 T 14-10-2018 D172_009295 1021473d87c6a6388cc3a6aa92617d13 424 SUPERFAMILY SSF49899 33 417 8.64E-30 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D172_009295 1021473d87c6a6388cc3a6aa92617d13 424 Gene3D G3DSA:2.60.120.200 271 422 2.4E-19 T 14-10-2018 D172_009295 1021473d87c6a6388cc3a6aa92617d13 424 SUPERFAMILY SSF49785 263 342 7.28E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_015330 2dde71ad68f59c3f937c029a05f4bb03 750 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 538 742 1.3E-52 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 D172_015330 2dde71ad68f59c3f937c029a05f4bb03 750 Pfam PF13807 G-rich domain on putative tyrosine kinase 395 477 1.3E-32 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain D172_015330 2dde71ad68f59c3f937c029a05f4bb03 750 Gene3D G3DSA:3.40.50.300 471 750 6.0E-81 T 14-10-2018 D172_015330 2dde71ad68f59c3f937c029a05f4bb03 750 SUPERFAMILY SSF52540 552 747 9.27E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_015330 2dde71ad68f59c3f937c029a05f4bb03 750 Pfam PF02706 Chain length determinant protein 25 115 3.1E-19 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 D172_015330 2dde71ad68f59c3f937c029a05f4bb03 750 Pfam PF13614 AAA domain 558 686 2.1E-13 T 14-10-2018 IPR025669 AAA domain D172_003515 c5cdc0db1c588c8ea6e80989fff305e0 196 Gene3D G3DSA:2.102.10.10 43 190 2.7E-47 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 D172_003515 c5cdc0db1c588c8ea6e80989fff305e0 196 SUPERFAMILY SSF50022 30 188 4.64E-41 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 D172_003515 c5cdc0db1c588c8ea6e80989fff305e0 196 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 7.3E-70 T 14-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 D172_003515 c5cdc0db1c588c8ea6e80989fff305e0 196 Pfam PF00355 Rieske [2Fe-2S] domain 114 177 2.8E-10 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 D172_003515 c5cdc0db1c588c8ea6e80989fff305e0 196 Gene3D G3DSA:1.20.5.510 1 40 9.9E-7 T 14-10-2018 D172_003515 c5cdc0db1c588c8ea6e80989fff305e0 196 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 3 40 1.8E-16 T 14-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 D172_003515 c5cdc0db1c588c8ea6e80989fff305e0 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 1.2E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 D172_003515 c5cdc0db1c588c8ea6e80989fff305e0 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 1.2E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 D172_003515 c5cdc0db1c588c8ea6e80989fff305e0 196 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 1.2E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 D172_009170 79d006a254a2467c0f147dbb3f110743 95 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.301 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 D172_009170 79d006a254a2467c0f147dbb3f110743 95 SUPERFAMILY SSF47729 1 91 3.83E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D172_009170 79d006a254a2467c0f147dbb3f110743 95 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.7E-29 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_009170 79d006a254a2467c0f147dbb3f110743 95 Gene3D G3DSA:4.10.520.10 40 91 1.6E-27 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D172_009170 79d006a254a2467c0f147dbb3f110743 95 Gene3D G3DSA:4.10.520.10 2 38 3.8E-9 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D172_009170 79d006a254a2467c0f147dbb3f110743 95 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 D172_009170 79d006a254a2467c0f147dbb3f110743 95 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 9.6E-48 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 D172_009170 79d006a254a2467c0f147dbb3f110743 95 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 4.4E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_009170 79d006a254a2467c0f147dbb3f110743 95 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 4.4E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_009170 79d006a254a2467c0f147dbb3f110743 95 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 4.4E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_009170 79d006a254a2467c0f147dbb3f110743 95 SMART SM00411 1 91 1.1E-39 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_011965 e13bf3ce43a21e1053c01ff4c9a4cbf3 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.849 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 D172_011965 e13bf3ce43a21e1053c01ff4c9a4cbf3 363 PIRSF PIRSF006641 1 363 3.9E-154 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 D172_011965 e13bf3ce43a21e1053c01ff4c9a4cbf3 363 Gene3D G3DSA:3.40.50.300 4 278 2.3E-148 T 14-10-2018 D172_011965 e13bf3ce43a21e1053c01ff4c9a4cbf3 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 6.4E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_011965 e13bf3ce43a21e1053c01ff4c9a4cbf3 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.4E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_011965 e13bf3ce43a21e1053c01ff4c9a4cbf3 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 6.4E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_011965 e13bf3ce43a21e1053c01ff4c9a4cbf3 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 6.4E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_011965 e13bf3ce43a21e1053c01ff4c9a4cbf3 363 Gene3D G3DSA:1.10.150.300 120 200 2.3E-148 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 D172_011965 e13bf3ce43a21e1053c01ff4c9a4cbf3 363 SUPERFAMILY SSF52540 3 301 7.09E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_011965 e13bf3ce43a21e1053c01ff4c9a4cbf3 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 3.6E-165 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 D172_011965 e13bf3ce43a21e1053c01ff4c9a4cbf3 363 SUPERFAMILY SSF81271 279 359 1.72E-35 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 D172_011965 e13bf3ce43a21e1053c01ff4c9a4cbf3 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 2.3E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_011965 e13bf3ce43a21e1053c01ff4c9a4cbf3 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 4.5E-39 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 D172_011965 e13bf3ce43a21e1053c01ff4c9a4cbf3 363 Gene3D G3DSA:3.10.20.30 48 362 2.3E-148 T 14-10-2018 IPR012675 Beta-grasp domain superfamily D172_005135 2be015c86f54ce6a7c56fad4d7689168 401 SUPERFAMILY SSF103473 10 387 6.8E-56 T 14-10-2018 IPR036259 MFS transporter superfamily D172_005135 2be015c86f54ce6a7c56fad4d7689168 401 Gene3D G3DSA:1.20.1250.20 10 387 3.3E-47 T 14-10-2018 D172_005135 2be015c86f54ce6a7c56fad4d7689168 401 Pfam PF07690 Major Facilitator Superfamily 21 234 1.9E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_006200 e15aa93b6a6de16410399ef719c06763 254 Gene3D G3DSA:3.60.20.10 1 254 2.5E-95 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_006200 e15aa93b6a6de16410399ef719c06763 254 SUPERFAMILY SSF56235 2 252 6.86E-50 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_006200 e15aa93b6a6de16410399ef719c06763 254 Pfam PF13230 Glutamine amidotransferases class-II 1 253 1.2E-110 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 D172_019470 8e67f86c0482bcdf3d2f916d5e1e7ff5 401 SUPERFAMILY SSF53383 12 397 2.29E-125 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_019470 8e67f86c0482bcdf3d2f916d5e1e7ff5 401 Pfam PF00202 Aminotransferase class-III 16 395 1.9E-124 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D172_019470 8e67f86c0482bcdf3d2f916d5e1e7ff5 401 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 218 255 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D172_019470 8e67f86c0482bcdf3d2f916d5e1e7ff5 401 Gene3D G3DSA:3.40.640.10 55 300 7.4E-146 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_019470 8e67f86c0482bcdf3d2f916d5e1e7ff5 401 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 3 399 9.5E-209 T 14-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 D172_019470 8e67f86c0482bcdf3d2f916d5e1e7ff5 401 Gene3D G3DSA:3.90.1150.10 21 388 7.4E-146 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_019470 8e67f86c0482bcdf3d2f916d5e1e7ff5 401 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 12 395 7.3E-144 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 D172_019470 8e67f86c0482bcdf3d2f916d5e1e7ff5 401 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 68.72 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 D172_019470 8e67f86c0482bcdf3d2f916d5e1e7ff5 401 PIRSF PIRSF000521 167 398 9.8E-34 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D172_019470 8e67f86c0482bcdf3d2f916d5e1e7ff5 401 PIRSF PIRSF000521 12 151 3.0E-6 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 535 24.7 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 Pfam PF02096 60Kd inner membrane protein 354 533 2.7E-61 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 PRINTS PR00701 60kDa inner membrane protein signature 77 98 2.1E-95 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 PRINTS PR00701 60kDa inner membrane protein signature 462 484 2.1E-95 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 PRINTS PR00701 60kDa inner membrane protein signature 499 522 2.1E-95 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 PRINTS PR00701 60kDa inner membrane protein signature 218 236 2.1E-95 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 PRINTS PR00701 60kDa inner membrane protein signature 415 438 2.1E-95 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 PRINTS PR00701 60kDa inner membrane protein signature 166 186 2.1E-95 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 PRINTS PR00701 60kDa inner membrane protein signature 324 344 2.1E-95 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 PRINTS PR00701 60kDa inner membrane protein signature 251 266 2.1E-95 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.1E-95 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 Gene3D G3DSA:2.70.98.90 67 333 1.6E-89 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 353 533 6.0E-69 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 PRINTS PR01900 YidC translocation/secretion protein signature 488 512 8.5E-27 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 PRINTS PR01900 YidC translocation/secretion protein signature 339 355 8.5E-27 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 PRINTS PR01900 YidC translocation/secretion protein signature 468 483 8.5E-27 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 352 9.5E-113 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal D172_000195 becbd1a7ea75364830f080b7db62b3b7 544 Pfam PF14849 YidC periplasmic domain 72 342 3.0E-82 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain D172_012565 fa0b78c744ebff78663c43b96a547e15 318 Gene3D G3DSA:3.90.226.10 2 317 2.4E-112 T 14-10-2018 D172_012565 fa0b78c744ebff78663c43b96a547e15 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 199 208 4.9E-47 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D172_012565 fa0b78c744ebff78663c43b96a547e15 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 171 184 4.9E-47 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D172_012565 fa0b78c744ebff78663c43b96a547e15 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 136 152 4.9E-47 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D172_012565 fa0b78c744ebff78663c43b96a547e15 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 155 168 4.9E-47 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D172_012565 fa0b78c744ebff78663c43b96a547e15 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 90 101 4.9E-47 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D172_012565 fa0b78c744ebff78663c43b96a547e15 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 115 133 4.9E-47 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D172_012565 fa0b78c744ebff78663c43b96a547e15 318 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 1 318 9.5E-157 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D172_012565 fa0b78c744ebff78663c43b96a547e15 318 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 150 3.8E-61 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D172_012565 fa0b78c744ebff78663c43b96a547e15 318 SUPERFAMILY SSF52096 5 317 4.21E-98 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_012565 fa0b78c744ebff78663c43b96a547e15 318 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 318 49.26 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 D172_014570 04300599c6545fc5f8cbf2be52754f8b 415 Gene3D G3DSA:2.40.30.170 174 187 1.8E-7 T 14-10-2018 D172_014570 04300599c6545fc5f8cbf2be52754f8b 415 Gene3D G3DSA:2.40.420.20 340 415 5.2E-12 T 14-10-2018 D172_014570 04300599c6545fc5f8cbf2be52754f8b 415 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 221 329 1.5E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D172_014570 04300599c6545fc5f8cbf2be52754f8b 415 Gene3D G3DSA:2.40.50.100 224 259 2.5E-19 T 14-10-2018 D172_014570 04300599c6545fc5f8cbf2be52754f8b 415 Gene3D G3DSA:2.40.50.100 188 221 1.8E-7 T 14-10-2018 D172_014570 04300599c6545fc5f8cbf2be52754f8b 415 SUPERFAMILY SSF111369 186 333 2.88E-10 T 14-10-2018 D172_014570 04300599c6545fc5f8cbf2be52754f8b 415 Gene3D G3DSA:2.40.420.20 163 173 1.8E-7 T 14-10-2018 D172_014570 04300599c6545fc5f8cbf2be52754f8b 415 Gene3D G3DSA:2.40.30.170 260 329 2.5E-19 T 14-10-2018 D172_008105 6babcf164b88ee541b7f45fefba1aa90 200 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 200 30.222 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD D172_008105 6babcf164b88ee541b7f45fefba1aa90 200 Pfam PF04356 Protein of unknown function (DUF489) 5 193 3.5E-70 T 14-10-2018 IPR007451 High frequency lysogenization protein HflD D172_008105 6babcf164b88ee541b7f45fefba1aa90 200 Gene3D G3DSA:1.10.3890.10 1 200 3.3E-70 T 14-10-2018 IPR035932 HflD-like superfamily D172_008105 6babcf164b88ee541b7f45fefba1aa90 200 SUPERFAMILY SSF101322 4 198 1.26E-65 T 14-10-2018 IPR035932 HflD-like superfamily D172_008105 6babcf164b88ee541b7f45fefba1aa90 200 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 7 195 2.0E-105 T 14-10-2018 D172_004800 908f56dce4a89038b1e5cc0d40174ecd 505 Gene3D G3DSA:3.40.50.1820 48 281 6.4E-16 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_004800 908f56dce4a89038b1e5cc0d40174ecd 505 Pfam PF00450 Serine carboxypeptidase 73 224 1.3E-12 T 14-10-2018 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 D172_004800 908f56dce4a89038b1e5cc0d40174ecd 505 SUPERFAMILY SSF53474 33 480 3.25E-75 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_006215 5299a0b68ba241a0e2d68acc54899f0b 350 SUPERFAMILY SSF56042 172 341 8.07E-62 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily D172_006215 5299a0b68ba241a0e2d68acc54899f0b 350 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 1.1E-147 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D172_006215 5299a0b68ba241a0e2d68acc54899f0b 350 Gene3D G3DSA:3.90.650.10 172 346 2.4E-71 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily D172_006215 5299a0b68ba241a0e2d68acc54899f0b 350 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 165 3.5E-14 T 14-10-2018 IPR016188 PurM-like, N-terminal domain D172_006215 5299a0b68ba241a0e2d68acc54899f0b 350 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 340 5.0E-36 T 14-10-2018 IPR010918 PurM-like, C-terminal domain D172_006215 5299a0b68ba241a0e2d68acc54899f0b 350 SUPERFAMILY SSF55326 8 171 3.14E-52 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily D172_006215 5299a0b68ba241a0e2d68acc54899f0b 350 Gene3D G3DSA:3.30.1330.10 7 171 1.5E-67 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily D172_006215 5299a0b68ba241a0e2d68acc54899f0b 350 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.343 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D172_016865 71cfe8eb3a0ebd649814cc1f16aa0ea5 114 SUPERFAMILY SSF53448 5 100 1.95E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_016865 71cfe8eb3a0ebd649814cc1f16aa0ea5 114 Gene3D G3DSA:3.90.550.10 3 108 8.5E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_016865 71cfe8eb3a0ebd649814cc1f16aa0ea5 114 Pfam PF00483 Nucleotidyl transferase 7 102 1.2E-24 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 D172_000865 ce11d2e6a36600574820d58ff6f5caaf 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 6.2E-22 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_000865 ce11d2e6a36600574820d58ff6f5caaf 419 Pfam PF07497 Rho termination factor, RNA-binding domain 53 125 1.5E-30 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 D172_000865 ce11d2e6a36600574820d58ff6f5caaf 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.4E-17 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 D172_000865 ce11d2e6a36600574820d58ff6f5caaf 419 SMART SM00959 5 47 3.7E-18 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 D172_000865 ce11d2e6a36600574820d58ff6f5caaf 419 Gene3D G3DSA:2.40.50.140 47 123 1.4E-32 T 14-10-2018 D172_000865 ce11d2e6a36600574820d58ff6f5caaf 419 SUPERFAMILY SSF68912 1 46 2.9E-12 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily D172_000865 ce11d2e6a36600574820d58ff6f5caaf 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.0E-216 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 D172_000865 ce11d2e6a36600574820d58ff6f5caaf 419 SMART SM00357 52 118 6.3E-14 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 D172_000865 ce11d2e6a36600574820d58ff6f5caaf 419 SMART SM00382 170 355 8.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_000865 ce11d2e6a36600574820d58ff6f5caaf 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 247.71 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 D172_000865 ce11d2e6a36600574820d58ff6f5caaf 419 SUPERFAMILY SSF50249 49 125 1.26E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_000865 ce11d2e6a36600574820d58ff6f5caaf 419 SUPERFAMILY SSF52540 91 371 5.03E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_000865 ce11d2e6a36600574820d58ff6f5caaf 419 Gene3D G3DSA:1.10.720.10 1 46 4.7E-21 T 14-10-2018 D172_000865 ce11d2e6a36600574820d58ff6f5caaf 419 Gene3D G3DSA:3.40.50.300 130 417 4.9E-132 T 14-10-2018 D172_000065 23241800bf6fc6e25f202bbcd2c45da1 168 PRINTS PR01576 Peptide deformylase signature 89 100 4.3E-37 T 14-10-2018 IPR023635 Peptide deformylase D172_000065 23241800bf6fc6e25f202bbcd2c45da1 168 PRINTS PR01576 Peptide deformylase signature 101 119 4.3E-37 T 14-10-2018 IPR023635 Peptide deformylase D172_000065 23241800bf6fc6e25f202bbcd2c45da1 168 PRINTS PR01576 Peptide deformylase signature 120 149 4.3E-37 T 14-10-2018 IPR023635 Peptide deformylase D172_000065 23241800bf6fc6e25f202bbcd2c45da1 168 PRINTS PR01576 Peptide deformylase signature 33 62 4.3E-37 T 14-10-2018 IPR023635 Peptide deformylase D172_000065 23241800bf6fc6e25f202bbcd2c45da1 168 Gene3D G3DSA:3.90.45.10 3 168 2.3E-62 T 14-10-2018 IPR036821 Peptide deformylase superfamily D172_000065 23241800bf6fc6e25f202bbcd2c45da1 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 5.6E-62 T 14-10-2018 IPR023635 Peptide deformylase D172_000065 23241800bf6fc6e25f202bbcd2c45da1 168 PIRSF PIRSF004749 1 168 2.5E-55 T 14-10-2018 IPR023635 Peptide deformylase D172_000065 23241800bf6fc6e25f202bbcd2c45da1 168 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.444 T 14-10-2018 IPR023635 Peptide deformylase D172_000065 23241800bf6fc6e25f202bbcd2c45da1 168 SUPERFAMILY SSF56420 3 164 1.57E-60 T 14-10-2018 IPR036821 Peptide deformylase superfamily D172_000065 23241800bf6fc6e25f202bbcd2c45da1 168 Pfam PF01327 Polypeptide deformylase 5 152 3.7E-50 T 14-10-2018 IPR023635 Peptide deformylase D172_010435 18feba3d7e43dd5c23cb877856d24c62 268 Pfam PF09836 Putative DNA-binding domain 36 99 8.1E-15 T 14-10-2018 IPR018640 Putative DNA-binding domain, bacteria D172_007225 3dc306d462c6052f2ee2efcdaf2baeaa 148 Pfam PF00072 Response regulator receiver domain 8 137 1.4E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_007225 3dc306d462c6052f2ee2efcdaf2baeaa 148 SUPERFAMILY SSF52172 6 142 1.32E-18 T 14-10-2018 IPR011006 CheY-like superfamily D172_007225 3dc306d462c6052f2ee2efcdaf2baeaa 148 Gene3D G3DSA:3.40.50.2300 2 143 1.1E-23 T 14-10-2018 D172_007225 3dc306d462c6052f2ee2efcdaf2baeaa 148 SMART SM00448 6 137 4.7E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_013025 b8449835f43a7e780efa0143bcaf535e 249 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 4 244 54.171 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_013025 b8449835f43a7e780efa0143bcaf535e 249 Gene3D G3DSA:3.20.20.70 3 248 2.2E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_013025 b8449835f43a7e780efa0143bcaf535e 249 SUPERFAMILY SSF51351 3 244 3.53E-83 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_013025 b8449835f43a7e780efa0143bcaf535e 249 ProSitePatterns PS00171 Triosephosphate isomerase active site. 161 171 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_013025 b8449835f43a7e780efa0143bcaf535e 249 Pfam PF00121 Triosephosphate isomerase 7 242 2.3E-84 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_013025 b8449835f43a7e780efa0143bcaf535e 249 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 236 1.1E-64 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 D172_002725 31ba0a20c591b8d3d688cabcba37fcb1 185 Gene3D G3DSA:3.40.1740.10 1 185 7.9E-70 T 14-10-2018 D172_002725 31ba0a20c591b8d3d688cabcba37fcb1 185 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 2 185 39.134 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 D172_002725 31ba0a20c591b8d3d688cabcba37fcb1 185 Pfam PF02622 Uncharacterized ACR, COG1678 13 172 9.4E-52 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 D172_002725 31ba0a20c591b8d3d688cabcba37fcb1 185 SUPERFAMILY SSF143456 2 185 6.67E-67 T 14-10-2018 D172_014585 dcb7ac4685427a5d47bcbe1f0c4d66a3 272 SMART SM00342 188 271 1.7E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_014585 dcb7ac4685427a5d47bcbe1f0c4d66a3 272 SUPERFAMILY SSF46689 224 272 1.08E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_014585 dcb7ac4685427a5d47bcbe1f0c4d66a3 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 255 8.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D172_014585 dcb7ac4685427a5d47bcbe1f0c4d66a3 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 271 8.5E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D172_014585 dcb7ac4685427a5d47bcbe1f0c4d66a3 272 Pfam PF12833 Helix-turn-helix domain 194 272 8.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_014585 dcb7ac4685427a5d47bcbe1f0c4d66a3 272 Gene3D G3DSA:2.60.120.280 35 126 3.1E-7 T 14-10-2018 D172_014585 dcb7ac4685427a5d47bcbe1f0c4d66a3 272 Pfam PF02311 AraC-like ligand binding domain 52 118 6.1E-7 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 D172_014585 dcb7ac4685427a5d47bcbe1f0c4d66a3 272 SUPERFAMILY SSF51215 33 111 1.83E-9 T 14-10-2018 IPR037923 Transcription regulator HTH-like D172_014585 dcb7ac4685427a5d47bcbe1f0c4d66a3 272 Gene3D G3DSA:1.10.10.60 170 272 1.3E-24 T 14-10-2018 D172_019640 9267aa9aa8121aa0880192d63bbbf4cb 420 Gene3D G3DSA:3.40.50.150 138 410 3.1E-95 T 14-10-2018 D172_019640 9267aa9aa8121aa0880192d63bbbf4cb 420 SUPERFAMILY SSF53335 19 360 5.0E-87 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_019640 9267aa9aa8121aa0880192d63bbbf4cb 420 Pfam PF02353 Mycolic acid cyclopropane synthetase 134 399 2.3E-79 T 14-10-2018 D172_019640 9267aa9aa8121aa0880192d63bbbf4cb 420 PIRSF PIRSF003085 14 416 3.3E-116 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 D172_004810 c499b6ba8abc6d624a6e886b53fdc6e5 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 D172_004810 c499b6ba8abc6d624a6e886b53fdc6e5 112 Gene3D G3DSA:3.30.70.120 1 112 8.0E-45 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal D172_004810 c499b6ba8abc6d624a6e886b53fdc6e5 112 SUPERFAMILY SSF54913 1 112 1.14E-43 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta D172_004810 c499b6ba8abc6d624a6e886b53fdc6e5 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 6.5E-42 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D172_004810 c499b6ba8abc6d624a6e886b53fdc6e5 112 SMART SM00938 4 105 2.1E-63 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D172_004810 c499b6ba8abc6d624a6e886b53fdc6e5 112 PIRSF PIRSF039144 1 112 2.9E-53 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D172_004810 c499b6ba8abc6d624a6e886b53fdc6e5 112 PRINTS PR00340 P-II protein signature 23 41 2.4E-38 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D172_004810 c499b6ba8abc6d624a6e886b53fdc6e5 112 PRINTS PR00340 P-II protein signature 83 103 2.4E-38 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D172_004810 c499b6ba8abc6d624a6e886b53fdc6e5 112 PRINTS PR00340 P-II protein signature 2 17 2.4E-38 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D172_004810 c499b6ba8abc6d624a6e886b53fdc6e5 112 PRINTS PR00340 P-II protein signature 52 75 2.4E-38 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 D172_004810 c499b6ba8abc6d624a6e886b53fdc6e5 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 D172_006645 ecc23789c9c13546cb8200ae58d94b52 336 SUPERFAMILY SSF52540 23 254 2.79E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006645 ecc23789c9c13546cb8200ae58d94b52 336 Gene3D G3DSA:1.10.10.10 260 336 1.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_006645 ecc23789c9c13546cb8200ae58d94b52 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 3.8E-146 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 D172_006645 ecc23789c9c13546cb8200ae58d94b52 336 Gene3D G3DSA:3.40.50.300 21 184 2.8E-40 T 14-10-2018 D172_006645 ecc23789c9c13546cb8200ae58d94b52 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 177.723 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 D172_006645 ecc23789c9c13546cb8200ae58d94b52 336 Gene3D G3DSA:1.10.8.60 185 258 1.9E-29 T 14-10-2018 D172_006645 ecc23789c9c13546cb8200ae58d94b52 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 3.8E-34 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 D172_006645 ecc23789c9c13546cb8200ae58d94b52 336 SUPERFAMILY SSF46785 260 330 1.09E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_006645 ecc23789c9c13546cb8200ae58d94b52 336 SMART SM00382 54 181 4.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_006645 ecc23789c9c13546cb8200ae58d94b52 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 2.8E-116 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 D172_006645 ecc23789c9c13546cb8200ae58d94b52 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 330 1.0E-38 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 D172_017635 d58a464d445a6d25175c1200e68a170a 252 Pfam PF08929 Domain of unknown function (DUF1911) 142 243 3.3E-24 T 14-10-2018 IPR015025 Domain of unknown function DUF1911 D172_017635 d58a464d445a6d25175c1200e68a170a 252 Pfam PF08928 Domain of unknown function (DUF1910) 3 127 2.1E-12 T 14-10-2018 IPR015024 Domain of unknown function DUF1910 D172_017635 d58a464d445a6d25175c1200e68a170a 252 SUPERFAMILY SSF140731 107 249 8.5E-31 T 14-10-2018 IPR028983 PA2201-like, C-terminal D172_017635 d58a464d445a6d25175c1200e68a170a 252 Gene3D G3DSA:1.10.3920.10 101 251 5.0E-24 T 14-10-2018 IPR028983 PA2201-like, C-terminal D172_001415 2a4771d1babf9b0b72e63727f6ee075e 401 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 3 399 5.0E-211 T 14-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 D172_001415 2a4771d1babf9b0b72e63727f6ee075e 401 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 218 255 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D172_001415 2a4771d1babf9b0b72e63727f6ee075e 401 SUPERFAMILY SSF53383 10 395 4.89E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_001415 2a4771d1babf9b0b72e63727f6ee075e 401 Gene3D G3DSA:3.90.1150.10 25 388 1.2E-143 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_001415 2a4771d1babf9b0b72e63727f6ee075e 401 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 12 395 6.9E-145 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 D172_001415 2a4771d1babf9b0b72e63727f6ee075e 401 PIRSF PIRSF000521 165 398 2.2E-34 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D172_001415 2a4771d1babf9b0b72e63727f6ee075e 401 PIRSF PIRSF000521 10 152 3.5E-5 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D172_001415 2a4771d1babf9b0b72e63727f6ee075e 401 Gene3D G3DSA:3.40.640.10 55 300 1.2E-143 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_001415 2a4771d1babf9b0b72e63727f6ee075e 401 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 68.015 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 D172_001415 2a4771d1babf9b0b72e63727f6ee075e 401 Pfam PF00202 Aminotransferase class-III 18 395 8.2E-123 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D172_002890 35a1ca8a8ecd12fa4ce645f561f1cbab 270 SMART SM00382 36 221 1.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_002890 35a1ca8a8ecd12fa4ce645f561f1cbab 270 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_002890 35a1ca8a8ecd12fa4ce645f561f1cbab 270 SUPERFAMILY SSF52540 7 234 3.73E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_002890 35a1ca8a8ecd12fa4ce645f561f1cbab 270 Gene3D G3DSA:3.40.50.300 4 260 2.2E-66 T 14-10-2018 D172_002890 35a1ca8a8ecd12fa4ce645f561f1cbab 270 Pfam PF00005 ABC transporter 27 176 3.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_015880 2e833c82e7728651d99e86aa484e769f 415 Gene3D G3DSA:3.90.1150.10 250 393 2.1E-53 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_015880 2e833c82e7728651d99e86aa484e769f 415 PIRSF PIRSF001434 1 384 1.5E-131 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D172_015880 2e833c82e7728651d99e86aa484e769f 415 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 380 1.6E-138 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D172_015880 2e833c82e7728651d99e86aa484e769f 415 SUPERFAMILY SSF53383 15 380 4.81E-109 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_015880 2e833c82e7728651d99e86aa484e769f 415 Gene3D G3DSA:3.40.640.10 3 247 5.2E-77 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_015880 2e833c82e7728651d99e86aa484e769f 415 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D172_015880 2e833c82e7728651d99e86aa484e769f 415 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 381 1.4E-173 T 14-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 D172_019130 c076a095b5a07f5b5fdb36410db83d7a 751 Gene3D G3DSA:1.10.540.10 53 165 7.8E-89 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 D172_019130 c076a095b5a07f5b5fdb36410db83d7a 751 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 167 267 1.3E-10 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 D172_019130 c076a095b5a07f5b5fdb36410db83d7a 751 SUPERFAMILY SSF56645 52 285 1.96E-42 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 D172_019130 c076a095b5a07f5b5fdb36410db83d7a 751 Gene3D G3DSA:1.20.140.10 290 435 7.8E-89 T 14-10-2018 D172_019130 c076a095b5a07f5b5fdb36410db83d7a 751 Pfam PF09317 Domain of unknown function (DUF1974) 444 728 2.4E-72 T 14-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 D172_019130 c076a095b5a07f5b5fdb36410db83d7a 751 SUPERFAMILY SSF47203 290 446 7.41E-23 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 D172_019130 c076a095b5a07f5b5fdb36410db83d7a 751 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 76 162 2.5E-12 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 D172_019130 c076a095b5a07f5b5fdb36410db83d7a 751 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 432 2.0E-12 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 D172_019130 c076a095b5a07f5b5fdb36410db83d7a 751 Gene3D G3DSA:2.40.110.10 166 289 7.8E-89 T 14-10-2018 D172_016815 f669beccac371020c270c99486a90973 336 SUPERFAMILY SSF56176 3 191 3.05E-35 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D172_016815 f669beccac371020c270c99486a90973 336 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 5 322 1.3E-79 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_016815 f669beccac371020c270c99486a90973 336 Pfam PF01565 FAD binding domain 34 137 3.3E-15 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 D172_016815 f669beccac371020c270c99486a90973 336 SUPERFAMILY SSF56194 195 327 3.14E-44 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_016815 f669beccac371020c270c99486a90973 336 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 199 322 1.5E-29 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_016815 f669beccac371020c270c99486a90973 336 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 336 70.763 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_016815 f669beccac371020c270c99486a90973 336 Gene3D G3DSA:3.90.78.10 212 333 1.3E-37 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_016815 f669beccac371020c270c99486a90973 336 Gene3D G3DSA:3.30.43.10 3 63 9.6E-11 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 D172_016815 f669beccac371020c270c99486a90973 336 Gene3D G3DSA:3.30.465.10 64 211 1.2E-55 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 D172_020945 7cd1d52600b93c1db56fbdd129b869c4 306 Gene3D G3DSA:1.10.10.10 9 95 1.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_020945 7cd1d52600b93c1db56fbdd129b869c4 306 SUPERFAMILY SSF53850 94 300 2.17E-42 T 14-10-2018 D172_020945 7cd1d52600b93c1db56fbdd129b869c4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 2.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020945 7cd1d52600b93c1db56fbdd129b869c4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 2.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020945 7cd1d52600b93c1db56fbdd129b869c4 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 2.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020945 7cd1d52600b93c1db56fbdd129b869c4 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 7.3E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020945 7cd1d52600b93c1db56fbdd129b869c4 306 Pfam PF03466 LysR substrate binding domain 95 296 7.6E-41 T 14-10-2018 IPR005119 LysR, substrate-binding D172_020945 7cd1d52600b93c1db56fbdd129b869c4 306 Gene3D G3DSA:3.40.190.290 97 299 2.6E-56 T 14-10-2018 D172_020945 7cd1d52600b93c1db56fbdd129b869c4 306 SUPERFAMILY SSF46785 10 90 1.7E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_008895 5b8544e03e035d3781e0e744b04e960c 219 SUPERFAMILY SSF52218 1 172 2.51E-30 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_008895 5b8544e03e035d3781e0e744b04e960c 219 Gene3D G3DSA:3.40.50.360 1 215 4.3E-33 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_008895 5b8544e03e035d3781e0e744b04e960c 219 Pfam PF03358 NADPH-dependent FMN reductase 1 151 1.5E-22 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 D172_001405 cc86268745926daa6c1ceff34645598a 193 SUPERFAMILY SSF52317 1 190 1.06E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_001405 cc86268745926daa6c1ceff34645598a 193 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.3E-36 T 14-10-2018 D172_001405 cc86268745926daa6c1ceff34645598a 193 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.3E-36 T 14-10-2018 D172_001405 cc86268745926daa6c1ceff34645598a 193 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.3E-36 T 14-10-2018 D172_001405 cc86268745926daa6c1ceff34645598a 193 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.3E-36 T 14-10-2018 D172_001405 cc86268745926daa6c1ceff34645598a 193 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.3E-36 T 14-10-2018 D172_001405 cc86268745926daa6c1ceff34645598a 193 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.3E-36 T 14-10-2018 D172_001405 cc86268745926daa6c1ceff34645598a 193 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 2.5E-81 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_001405 cc86268745926daa6c1ceff34645598a 193 Pfam PF00117 Glutamine amidotransferase class-I 4 191 3.5E-53 T 14-10-2018 IPR017926 Glutamine amidotransferase D172_001405 cc86268745926daa6c1ceff34645598a 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 2.1E-6 T 14-10-2018 D172_001405 cc86268745926daa6c1ceff34645598a 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 2.1E-6 T 14-10-2018 D172_001405 cc86268745926daa6c1ceff34645598a 193 Gene3D G3DSA:3.40.50.880 1 192 1.5E-59 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_001405 cc86268745926daa6c1ceff34645598a 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 8.9E-14 T 14-10-2018 D172_001405 cc86268745926daa6c1ceff34645598a 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 8.9E-14 T 14-10-2018 D172_001405 cc86268745926daa6c1ceff34645598a 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 8.9E-14 T 14-10-2018 D172_015305 7d6d86301c52d1bda6130c3a614293fa 506 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 1 299 4.1E-84 T 14-10-2018 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase D172_015305 7d6d86301c52d1bda6130c3a614293fa 506 Gene3D G3DSA:3.40.50.11190 1 167 2.2E-35 T 14-10-2018 D172_015305 7d6d86301c52d1bda6130c3a614293fa 506 SUPERFAMILY SSF53756 16 355 4.11E-10 T 14-10-2018 D172_015305 7d6d86301c52d1bda6130c3a614293fa 506 Gene3D G3DSA:3.40.630.30 357 503 1.2E-20 T 14-10-2018 D172_015305 7d6d86301c52d1bda6130c3a614293fa 506 Gene3D G3DSA:3.40.50.2000 174 313 4.0E-32 T 14-10-2018 D172_015305 7d6d86301c52d1bda6130c3a614293fa 506 SUPERFAMILY SSF55729 353 497 3.87E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_015305 7d6d86301c52d1bda6130c3a614293fa 506 Pfam PF13302 Acetyltransferase (GNAT) domain 359 492 2.2E-14 T 14-10-2018 IPR000182 GNAT domain D172_015305 7d6d86301c52d1bda6130c3a614293fa 506 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 221 328 7.8E-6 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 D172_001250 66634cebc141b7abd1014b08eafef389 351 Gene3D G3DSA:3.30.1330.60 213 348 9.8E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily D172_001250 66634cebc141b7abd1014b08eafef389 351 SUPERFAMILY SSF103088 211 341 9.42E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily D172_001250 66634cebc141b7abd1014b08eafef389 351 PRINTS PR01021 OMPA domain signature 241 263 3.9E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D172_001250 66634cebc141b7abd1014b08eafef389 351 PRINTS PR01021 OMPA domain signature 286 302 3.9E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D172_001250 66634cebc141b7abd1014b08eafef389 351 PRINTS PR01021 OMPA domain signature 271 286 3.9E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D172_001250 66634cebc141b7abd1014b08eafef389 351 Pfam PF00691 OmpA family 240 335 5.4E-19 T 14-10-2018 IPR006665 OmpA-like domain D172_001250 66634cebc141b7abd1014b08eafef389 351 Gene3D G3DSA:2.40.160.20 14 173 1.2E-15 T 14-10-2018 D172_001250 66634cebc141b7abd1014b08eafef389 351 SUPERFAMILY SSF56925 25 178 4.71E-12 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D172_001250 66634cebc141b7abd1014b08eafef389 351 Pfam PF13505 Outer membrane protein beta-barrel domain 8 171 1.1E-11 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel D172_009405 d3df7843b319ae0439da52d1c6e085fb 367 Gene3D G3DSA:2.120.10.30 138 366 1.2E-21 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_009405 d3df7843b319ae0439da52d1c6e085fb 367 Gene3D G3DSA:2.120.10.30 24 132 4.2E-6 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_009405 d3df7843b319ae0439da52d1c6e085fb 367 SUPERFAMILY SSF63829 31 355 3.6E-20 T 14-10-2018 D172_004925 47ccd95a56aa08b16f3dde5d3c6bee8a 202 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 200 7.7E-59 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 D172_004925 47ccd95a56aa08b16f3dde5d3c6bee8a 202 PIRSF PIRSF006102 1 202 9.1E-63 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 D172_004925 47ccd95a56aa08b16f3dde5d3c6bee8a 202 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 202 29.281 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 D172_004925 47ccd95a56aa08b16f3dde5d3c6bee8a 202 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 200 3.7E-103 T 14-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 D172_005205 dbcd4c63c2319aaeb9ed536dca808523 285 SUPERFAMILY SSF56112 18 213 1.39E-20 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily D172_005205 dbcd4c63c2319aaeb9ed536dca808523 285 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 14-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 D172_005205 dbcd4c63c2319aaeb9ed536dca808523 285 Gene3D G3DSA:1.10.510.10 141 226 6.2E-19 T 14-10-2018 D172_005205 dbcd4c63c2319aaeb9ed536dca808523 285 Pfam PF01163 RIO1 family 47 222 1.3E-38 T 14-10-2018 D172_005205 dbcd4c63c2319aaeb9ed536dca808523 285 SMART SM00090 5 235 5.0E-10 T 14-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 D172_020770 a4ac5682d0e5651bb820e75c96a62adb 524 Gene3D G3DSA:3.40.50.300 273 524 9.3E-50 T 14-10-2018 D172_020770 a4ac5682d0e5651bb820e75c96a62adb 524 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_020770 a4ac5682d0e5651bb820e75c96a62adb 524 Pfam PF00005 ABC transporter 332 459 3.8E-16 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_020770 a4ac5682d0e5651bb820e75c96a62adb 524 SUPERFAMILY SSF52540 3 230 1.58E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_020770 a4ac5682d0e5651bb820e75c96a62adb 524 Pfam PF00005 ABC transporter 10 176 5.3E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_020770 a4ac5682d0e5651bb820e75c96a62adb 524 SUPERFAMILY SSF52540 297 516 1.25E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_020770 a4ac5682d0e5651bb820e75c96a62adb 524 Pfam PF12848 ABC transporter 216 298 2.0E-21 T 14-10-2018 IPR032781 ABC-transporter extension domain D172_020770 a4ac5682d0e5651bb820e75c96a62adb 524 Gene3D G3DSA:3.40.50.300 2 271 4.3E-55 T 14-10-2018 D172_020770 a4ac5682d0e5651bb820e75c96a62adb 524 SMART SM00382 18 230 2.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_020770 a4ac5682d0e5651bb820e75c96a62adb 524 SMART SM00382 336 504 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_015265 d8c887216ea1c503e19ef620286bc623 408 Pfam PF13579 Glycosyl transferase 4-like domain 17 191 2.0E-16 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D172_015265 d8c887216ea1c503e19ef620286bc623 408 Gene3D G3DSA:3.40.50.2000 1 208 4.2E-20 T 14-10-2018 D172_015265 d8c887216ea1c503e19ef620286bc623 408 Gene3D G3DSA:3.40.50.2000 209 386 1.4E-16 T 14-10-2018 D172_015265 d8c887216ea1c503e19ef620286bc623 408 SUPERFAMILY SSF53756 2 401 2.66E-40 T 14-10-2018 D172_015265 d8c887216ea1c503e19ef620286bc623 408 Pfam PF00534 Glycosyl transferases group 1 213 379 9.2E-10 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 D172_014655 6620df59d665c94535cc25373c708fee 133 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.3E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D172_014655 6620df59d665c94535cc25373c708fee 133 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.3E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D172_014655 6620df59d665c94535cc25373c708fee 133 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D172_014655 6620df59d665c94535cc25373c708fee 133 SUPERFAMILY SSF55811 4 122 2.03E-31 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D172_014655 6620df59d665c94535cc25373c708fee 133 Pfam PF00293 NUDIX domain 6 119 4.4E-22 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D172_014655 6620df59d665c94535cc25373c708fee 133 Gene3D G3DSA:3.90.79.10 1 132 3.1E-42 T 14-10-2018 D172_013750 cc16a35d260933a37cca519615c9623b 149 PIRSF PIRSF004923 1 143 4.9E-23 T 14-10-2018 IPR026268 Protein RseC D172_013750 cc16a35d260933a37cca519615c9623b 149 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 130 3.7E-23 T 14-10-2018 D172_012905 eaa586758d534201b18b68ba89c8b01d 338 Gene3D G3DSA:3.30.360.10 130 317 4.2E-145 T 14-10-2018 D172_012905 eaa586758d534201b18b68ba89c8b01d 338 SUPERFAMILY SSF51735 5 159 3.5E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_012905 eaa586758d534201b18b68ba89c8b01d 338 SUPERFAMILY SSF55347 131 321 4.46E-79 T 14-10-2018 D172_012905 eaa586758d534201b18b68ba89c8b01d 338 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 334 37.681 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_012905 eaa586758d534201b18b68ba89c8b01d 338 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 1.2E-27 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 D172_012905 eaa586758d534201b18b68ba89c8b01d 338 PIRSF PIRSF000148 4 338 9.1E-133 T 14-10-2018 D172_012905 eaa586758d534201b18b68ba89c8b01d 338 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_012905 eaa586758d534201b18b68ba89c8b01d 338 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 320 6.5E-65 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D172_012905 eaa586758d534201b18b68ba89c8b01d 338 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 336 6.1E-137 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_012905 eaa586758d534201b18b68ba89c8b01d 338 Gene3D G3DSA:3.40.50.720 7 331 4.2E-145 T 14-10-2018 D172_012905 eaa586758d534201b18b68ba89c8b01d 338 SMART SM00859 6 121 5.1E-36 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 D172_011435 c7d307323a90f5a020d3452fdf288533 149 Pfam PF04191 Phospholipid methyltransferase 36 137 4.7E-17 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 D172_011435 c7d307323a90f5a020d3452fdf288533 149 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 107 149 1.0E-13 T 14-10-2018 D172_011435 c7d307323a90f5a020d3452fdf288533 149 Gene3D G3DSA:1.20.120.1630 3 149 8.8E-27 T 14-10-2018 D172_005790 7ed7db1dfd3e3057fa4cdd745c58b885 3735 Gene3D G3DSA:2.60.40.10 165 264 7.5E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_005790 7ed7db1dfd3e3057fa4cdd745c58b885 3735 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1825 1907 5.4E-5 T 14-10-2018 IPR010221 VCBS repeat D172_005790 7ed7db1dfd3e3057fa4cdd745c58b885 3735 Gene3D G3DSA:2.150.10.10 1049 1181 7.0E-11 T 14-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal D172_005790 7ed7db1dfd3e3057fa4cdd745c58b885 3735 SUPERFAMILY SSF56925 3562 3735 3.41E-6 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D172_005790 7ed7db1dfd3e3057fa4cdd745c58b885 3735 Gene3D G3DSA:2.60.40.10 1698 1789 3.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_005790 7ed7db1dfd3e3057fa4cdd745c58b885 3735 Gene3D G3DSA:2.60.40.10 2558 2663 5.9E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_005790 7ed7db1dfd3e3057fa4cdd745c58b885 3735 Gene3D G3DSA:2.60.40.10 2467 2556 1.1E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_005790 7ed7db1dfd3e3057fa4cdd745c58b885 3735 SUPERFAMILY SSF49313 1701 1792 7.38E-16 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 D172_005790 7ed7db1dfd3e3057fa4cdd745c58b885 3735 ProSitePatterns PS00221 MIP family signature. 430 438 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 D172_005790 7ed7db1dfd3e3057fa4cdd745c58b885 3735 SUPERFAMILY SSF141072 2919 3014 9.29E-10 T 14-10-2018 IPR038081 CalX-like domain superfamily D172_005790 7ed7db1dfd3e3057fa4cdd745c58b885 3735 SUPERFAMILY SSF49313 2560 2651 2.36E-15 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 D172_005790 7ed7db1dfd3e3057fa4cdd745c58b885 3735 SMART SM00736 1701 1794 3.4E-10 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 D172_005790 7ed7db1dfd3e3057fa4cdd745c58b885 3735 SMART SM00736 2564 2654 2.4E-5 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 D172_005790 7ed7db1dfd3e3057fa4cdd745c58b885 3735 SMART SM00736 2470 2562 1.5E-11 T 14-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 D172_005790 7ed7db1dfd3e3057fa4cdd745c58b885 3735 SUPERFAMILY SSF49313 2468 2560 2.98E-16 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 D172_000130 8055f73bed7ee5ae2305d2227d3c5556 389 Gene3D G3DSA:3.40.47.10 5 267 4.2E-151 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_000130 8055f73bed7ee5ae2305d2227d3c5556 389 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 D172_000130 8055f73bed7ee5ae2305d2227d3c5556 389 Pfam PF00108 Thiolase, N-terminal domain 5 254 3.2E-80 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 D172_000130 8055f73bed7ee5ae2305d2227d3c5556 389 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 D172_000130 8055f73bed7ee5ae2305d2227d3c5556 389 Gene3D G3DSA:3.40.47.10 127 381 4.2E-151 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_000130 8055f73bed7ee5ae2305d2227d3c5556 389 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 D172_000130 8055f73bed7ee5ae2305d2227d3c5556 389 PIRSF PIRSF000429 1 388 3.2E-134 T 14-10-2018 IPR002155 Thiolase GO:0016747 D172_000130 8055f73bed7ee5ae2305d2227d3c5556 389 Pfam PF02803 Thiolase, C-terminal domain 262 386 1.9E-46 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 D172_000130 8055f73bed7ee5ae2305d2227d3c5556 389 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 1.7E-140 T 14-10-2018 IPR002155 Thiolase GO:0016747 D172_000130 8055f73bed7ee5ae2305d2227d3c5556 389 SUPERFAMILY SSF53901 1 259 1.03E-80 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_000130 8055f73bed7ee5ae2305d2227d3c5556 389 SUPERFAMILY SSF53901 263 386 5.44E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_000130 8055f73bed7ee5ae2305d2227d3c5556 389 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 59.693 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 D172_000130 8055f73bed7ee5ae2305d2227d3c5556 389 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 5 387 1.5E-216 T 14-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 D172_003560 7a2f2889e79a65473a125f20ccfbde84 285 Gene3D G3DSA:3.40.1010.10 2 119 3.2E-46 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 D172_003560 7a2f2889e79a65473a125f20ccfbde84 285 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 13 281 7.4E-89 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 D172_003560 7a2f2889e79a65473a125f20ccfbde84 285 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 12 233 35.49 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 D172_003560 7a2f2889e79a65473a125f20ccfbde84 285 Gene3D G3DSA:3.30.950.10 120 240 2.8E-36 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 D172_003560 7a2f2889e79a65473a125f20ccfbde84 285 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 90 101 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 D172_003560 7a2f2889e79a65473a125f20ccfbde84 285 PIRSF PIRSF005917 2 285 4.0E-101 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 D172_003560 7a2f2889e79a65473a125f20ccfbde84 285 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 12 212 6.6E-26 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 D172_003560 7a2f2889e79a65473a125f20ccfbde84 285 SUPERFAMILY SSF53790 10 231 1.02E-78 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 D172_005600 ebe9827d6c1c5b4bcb598186621c3853 377 Pfam PF01817 Chorismate mutase type II 11 89 3.2E-18 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D172_005600 ebe9827d6c1c5b4bcb598186621c3853 377 Pfam PF02153 Prephenate dehydrogenase 131 345 6.5E-31 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 D172_005600 ebe9827d6c1c5b4bcb598186621c3853 377 Gene3D G3DSA:3.40.50.720 83 247 5.0E-44 T 14-10-2018 D172_005600 ebe9827d6c1c5b4bcb598186621c3853 377 Gene3D G3DSA:1.10.3660.10 249 375 1.2E-39 T 14-10-2018 D172_005600 ebe9827d6c1c5b4bcb598186621c3853 377 SUPERFAMILY SSF48600 4 90 5.13E-22 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D172_005600 ebe9827d6c1c5b4bcb598186621c3853 377 SUPERFAMILY SSF51735 97 240 1.54E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_005600 ebe9827d6c1c5b4bcb598186621c3853 377 SMART SM00830 11 91 2.2E-27 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D172_005600 ebe9827d6c1c5b4bcb598186621c3853 377 Gene3D G3DSA:1.20.59.10 2 82 6.8E-15 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D172_005600 ebe9827d6c1c5b4bcb598186621c3853 377 SUPERFAMILY SSF48179 242 368 3.17E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_005600 ebe9827d6c1c5b4bcb598186621c3853 377 PIRSF PIRSF001499 4 376 1.5E-125 T 14-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 D172_018000 200e1bfa284481654e03971e91ac7ac0 172 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 51 4.0E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_018000 200e1bfa284481654e03971e91ac7ac0 172 SUPERFAMILY SSF46689 3 65 3.59E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_018000 200e1bfa284481654e03971e91ac7ac0 172 Gene3D G3DSA:1.10.357.10 1 172 2.6E-40 T 14-10-2018 D172_018000 200e1bfa284481654e03971e91ac7ac0 172 SUPERFAMILY SSF48498 77 170 2.16E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D172_011660 7e84be90c9b7ce0b2dd2c32db85d623d 738 SUPERFAMILY SSF48230 72 317 3.02E-46 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 D172_011660 7e84be90c9b7ce0b2dd2c32db85d623d 738 Gene3D G3DSA:1.50.10.100 30 374 3.6E-117 T 14-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 D172_011660 7e84be90c9b7ce0b2dd2c32db85d623d 738 Gene3D G3DSA:2.70.98.70 377 734 4.3E-98 T 14-10-2018 D172_011660 7e84be90c9b7ce0b2dd2c32db85d623d 738 Pfam PF07940 Heparinase II/III-like protein 383 646 1.2E-24 T 14-10-2018 IPR012480 Heparinase II/III-like GO:0016829 D172_011660 7e84be90c9b7ce0b2dd2c32db85d623d 738 Pfam PF05426 Alginate lyase 66 304 3.0E-19 T 14-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 D172_007405 65d42026950ea8db7fdab94e7673ab93 150 Pfam PF12019 Type II transport protein GspH 45 134 3.5E-5 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 D172_007405 65d42026950ea8db7fdab94e7673ab93 150 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 28 2.9E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_007405 65d42026950ea8db7fdab94e7673ab93 150 SUPERFAMILY SSF54523 9 101 3.06E-16 T 14-10-2018 D172_007405 65d42026950ea8db7fdab94e7673ab93 150 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 3.5E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_007405 65d42026950ea8db7fdab94e7673ab93 150 Gene3D G3DSA:3.30.700.10 9 147 2.6E-15 T 14-10-2018 D172_002265 0af7266af20c928395072af15f2d488f 154 SUPERFAMILY SSF75217 2 152 2.42E-45 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases D172_002265 0af7266af20c928395072af15f2d488f 154 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 6.5E-66 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 D172_002265 0af7266af20c928395072af15f2d488f 154 PIRSF PIRSF029256 1 154 5.7E-68 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 D172_002265 0af7266af20c928395072af15f2d488f 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 32.875 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 D172_002265 0af7266af20c928395072af15f2d488f 154 Gene3D G3DSA:3.40.1280.10 1 154 1.8E-67 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D172_002265 0af7266af20c928395072af15f2d488f 154 Pfam PF00588 SpoU rRNA Methylase family 2 142 3.9E-36 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 D172_009265 7e3e4d96f9c9d941faf709f94401347e 194 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 53 84 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_009265 7e3e4d96f9c9d941faf709f94401347e 194 Gene3D G3DSA:1.10.1740.10 8 122 7.2E-22 T 14-10-2018 D172_009265 7e3e4d96f9c9d941faf709f94401347e 194 SUPERFAMILY SSF88946 9 110 3.66E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D172_009265 7e3e4d96f9c9d941faf709f94401347e 194 Pfam PF04542 Sigma-70 region 2 31 97 3.5E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D172_009265 7e3e4d96f9c9d941faf709f94401347e 194 SUPERFAMILY SSF88659 128 186 5.45E-7 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_009265 7e3e4d96f9c9d941faf709f94401347e 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 184 8.5E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D172_003070 35d5a67c0ff7258307b731f5d2bc898d 209 PRINTS PR01374 Gram-negative bacterial tonB protein signature 68 78 2.8E-11 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_003070 35d5a67c0ff7258307b731f5d2bc898d 209 PRINTS PR01374 Gram-negative bacterial tonB protein signature 124 145 2.8E-11 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_003070 35d5a67c0ff7258307b731f5d2bc898d 209 PRINTS PR01374 Gram-negative bacterial tonB protein signature 164 181 2.8E-11 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_003070 35d5a67c0ff7258307b731f5d2bc898d 209 PRINTS PR01374 Gram-negative bacterial tonB protein signature 145 163 2.8E-11 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_003070 35d5a67c0ff7258307b731f5d2bc898d 209 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 130 207 1.1E-16 T 14-10-2018 IPR006260 TonB/TolA, C-terminal D172_003070 35d5a67c0ff7258307b731f5d2bc898d 209 SUPERFAMILY SSF74653 120 195 1.44E-23 T 14-10-2018 D172_003070 35d5a67c0ff7258307b731f5d2bc898d 209 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 129 207 1.7E-18 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 D172_003070 35d5a67c0ff7258307b731f5d2bc898d 209 Gene3D G3DSA:3.30.1150.10 111 208 6.9E-24 T 14-10-2018 D172_000655 ced9f6ee926388d25747173829b0eeb1 209 Pfam PF04337 Protein of unknown function, DUF480 3 153 1.2E-60 T 14-10-2018 IPR007432 Protein of unknown function DUF480 D172_000655 ced9f6ee926388d25747173829b0eeb1 209 Gene3D G3DSA:1.10.10.10 93 169 1.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_000655 ced9f6ee926388d25747173829b0eeb1 209 Gene3D G3DSA:1.10.10.10 1 88 9.4E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_000655 ced9f6ee926388d25747173829b0eeb1 209 Hamap MF_01584 UPF0502 protein YceH [yceH]. 3 205 31.931 T 14-10-2018 IPR007432 Protein of unknown function DUF480 D172_000655 ced9f6ee926388d25747173829b0eeb1 209 SUPERFAMILY SSF46785 2 82 6.9E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_000655 ced9f6ee926388d25747173829b0eeb1 209 SUPERFAMILY SSF46785 88 165 1.95E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_020465 7eb989a3f80b58da3e7a304e2e250224 293 SUPERFAMILY SSF53850 90 290 7.6E-41 T 14-10-2018 D172_020465 7eb989a3f80b58da3e7a304e2e250224 293 Gene3D G3DSA:1.10.10.10 1 87 4.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_020465 7eb989a3f80b58da3e7a304e2e250224 293 Pfam PF03466 LysR substrate binding domain 94 287 1.5E-24 T 14-10-2018 IPR005119 LysR, substrate-binding D172_020465 7eb989a3f80b58da3e7a304e2e250224 293 Gene3D G3DSA:3.40.190.10 171 267 4.8E-44 T 14-10-2018 D172_020465 7eb989a3f80b58da3e7a304e2e250224 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 3.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020465 7eb989a3f80b58da3e7a304e2e250224 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 3.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020465 7eb989a3f80b58da3e7a304e2e250224 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 3.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020465 7eb989a3f80b58da3e7a304e2e250224 293 Gene3D G3DSA:3.40.190.10 90 286 4.8E-44 T 14-10-2018 D172_020465 7eb989a3f80b58da3e7a304e2e250224 293 SUPERFAMILY SSF46785 6 84 2.54E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_020465 7eb989a3f80b58da3e7a304e2e250224 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 1.2E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_012570 87ae963d0f1ae7e98565b809d565b966 1163 Gene3D G3DSA:1.10.10.1600 433 510 1.2E-31 T 14-10-2018 D172_012570 87ae963d0f1ae7e98565b809d565b966 1163 Pfam PF14579 Helix-hairpin-helix motif 809 897 4.5E-25 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_012570 87ae963d0f1ae7e98565b809d565b966 1163 Pfam PF02811 PHP domain 8 172 4.4E-41 T 14-10-2018 IPR004013 PHP domain GO:0003824 D172_012570 87ae963d0f1ae7e98565b809d565b966 1163 Gene3D G3DSA:2.40.50.140 983 1078 7.2E-7 T 14-10-2018 D172_012570 87ae963d0f1ae7e98565b809d565b966 1163 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1035 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_012570 87ae963d0f1ae7e98565b809d565b966 1163 Pfam PF01336 OB-fold nucleic acid binding domain 1001 1075 1.3E-6 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 D172_012570 87ae963d0f1ae7e98565b809d565b966 1163 SMART SM00481 7 74 8.6E-25 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal D172_012570 87ae963d0f1ae7e98565b809d565b966 1163 SUPERFAMILY SSF89550 6 263 8.44E-13 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 D172_012570 87ae963d0f1ae7e98565b809d565b966 1163 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 735 3.1E-172 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_012570 87ae963d0f1ae7e98565b809d565b966 1163 Gene3D G3DSA:3.20.20.140 1 270 2.0E-88 T 14-10-2018 D172_018380 45978020b922ecbfd8bad01d98f893c5 489 Gene3D G3DSA:2.160.20.10 39 488 1.4E-140 T 14-10-2018 IPR012334 Pectin lyase fold D172_018380 45978020b922ecbfd8bad01d98f893c5 489 SMART SM00710 351 374 1700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_018380 45978020b922ecbfd8bad01d98f893c5 489 SMART SM00710 377 403 4000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_018380 45978020b922ecbfd8bad01d98f893c5 489 SMART SM00710 242 272 3600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_018380 45978020b922ecbfd8bad01d98f893c5 489 SMART SM00710 324 345 8.3 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_018380 45978020b922ecbfd8bad01d98f893c5 489 SMART SM00710 290 311 16.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_018380 45978020b922ecbfd8bad01d98f893c5 489 Pfam PF12708 Pectate lyase superfamily protein 63 117 4.3E-7 T 14-10-2018 IPR024535 Pectate lyase superfamily protein D172_018380 45978020b922ecbfd8bad01d98f893c5 489 ProSitePatterns PS00502 Polygalacturonase active site. 331 345 - T 14-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 D172_018380 45978020b922ecbfd8bad01d98f893c5 489 SUPERFAMILY SSF51126 55 465 8.49E-93 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor D172_018380 45978020b922ecbfd8bad01d98f893c5 489 Pfam PF00295 Glycosyl hydrolases family 28 233 465 6.5E-33 T 14-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 D172_003145 380a68b9864ebf385eea49064c3fc721 263 Gene3D G3DSA:3.20.20.70 4 263 1.4E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_003145 380a68b9864ebf385eea49064c3fc721 263 Hamap MF_00443 Thiazole synthase [thiG]. 6 259 41.738 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 D172_003145 380a68b9864ebf385eea49064c3fc721 263 SUPERFAMILY SSF110399 5 245 1.83E-80 T 14-10-2018 D172_003145 380a68b9864ebf385eea49064c3fc721 263 Pfam PF05690 Thiazole biosynthesis protein ThiG 9 253 4.5E-103 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 D172_018045 a2397fc15c7e6f64bc2ae6877f6cd0f0 796 Gene3D G3DSA:2.170.130.10 33 178 1.1E-14 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_018045 a2397fc15c7e6f64bc2ae6877f6cd0f0 796 SUPERFAMILY SSF56935 33 795 9.52E-82 T 14-10-2018 D172_018045 a2397fc15c7e6f64bc2ae6877f6cd0f0 796 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 167 3.8E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_018045 a2397fc15c7e6f64bc2ae6877f6cd0f0 796 Pfam PF00593 TonB dependent receptor 325 793 3.7E-24 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_018045 a2397fc15c7e6f64bc2ae6877f6cd0f0 796 Gene3D G3DSA:2.40.170.20 182 795 7.7E-50 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_006310 3a960ddcc3ffa5f31a8ddd3cae547d2f 306 ProSitePatterns PS00893 Nudix box signature. 201 222 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D172_006310 3a960ddcc3ffa5f31a8ddd3cae547d2f 306 SUPERFAMILY SSF55811 113 302 9.88E-45 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D172_006310 3a960ddcc3ffa5f31a8ddd3cae547d2f 306 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 128 161 2.6E-10 T 14-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 D172_006310 3a960ddcc3ffa5f31a8ddd3cae547d2f 306 Gene3D G3DSA:3.90.79.20 15 162 3.5E-11 T 14-10-2018 D172_006310 3a960ddcc3ffa5f31a8ddd3cae547d2f 306 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 30 126 2.3E-15 T 14-10-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 D172_006310 3a960ddcc3ffa5f31a8ddd3cae547d2f 306 PRINTS PR00502 NUDIX hydrolase family signature 196 210 4.6E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D172_006310 3a960ddcc3ffa5f31a8ddd3cae547d2f 306 PRINTS PR00502 NUDIX hydrolase family signature 210 225 4.6E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D172_006310 3a960ddcc3ffa5f31a8ddd3cae547d2f 306 Pfam PF00293 NUDIX domain 178 279 1.9E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D172_006310 3a960ddcc3ffa5f31a8ddd3cae547d2f 306 Gene3D G3DSA:3.90.79.10 164 305 7.9E-40 T 14-10-2018 D172_015085 433f8913edf918aa1a77c111bf1b8fe3 726 Gene3D G3DSA:2.170.130.10 44 173 4.9E-41 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_015085 433f8913edf918aa1a77c111bf1b8fe3 726 Gene3D G3DSA:2.40.170.20 174 726 1.4E-125 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_015085 433f8913edf918aa1a77c111bf1b8fe3 726 SUPERFAMILY SSF56935 54 726 3.02E-124 T 14-10-2018 D172_015085 433f8913edf918aa1a77c111bf1b8fe3 726 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 160 1.4E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_015085 433f8913edf918aa1a77c111bf1b8fe3 726 Pfam PF00593 TonB dependent receptor 235 725 7.2E-57 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_015085 433f8913edf918aa1a77c111bf1b8fe3 726 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 64 726 2.9E-95 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 D172_010375 76a63dff8acd7dd22f6158d3813a508d 516 PIRSF PIRSF011396 1 510 1.4E-162 T 14-10-2018 IPR033856 Flavin-dependent tryptophan halogenase D172_010375 76a63dff8acd7dd22f6158d3813a508d 516 Gene3D G3DSA:3.50.50.60 1 509 7.3E-181 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_010375 76a63dff8acd7dd22f6158d3813a508d 516 Pfam PF04820 Tryptophan halogenase 7 466 5.8E-122 T 14-10-2018 IPR006905 Flavin-dependent halogenase D172_010375 76a63dff8acd7dd22f6158d3813a508d 516 SUPERFAMILY SSF51905 4 440 3.89E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_000400 9c73cac0d1e4b993d4f935d07f751d36 541 SUPERFAMILY SSF48452 90 199 1.8E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_000400 9c73cac0d1e4b993d4f935d07f751d36 541 SUPERFAMILY SSF48452 165 361 1.69E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_000400 9c73cac0d1e4b993d4f935d07f751d36 541 Pfam PF13424 Tetratricopeptide repeat 131 195 5.3E-10 T 14-10-2018 D172_000400 9c73cac0d1e4b993d4f935d07f751d36 541 SMART SM00028 129 162 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_000400 9c73cac0d1e4b993d4f935d07f751d36 541 SMART SM00028 209 242 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_000400 9c73cac0d1e4b993d4f935d07f751d36 541 SMART SM00028 169 202 0.27 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_000400 9c73cac0d1e4b993d4f935d07f751d36 541 Gene3D G3DSA:1.25.40.10 47 379 1.0E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_018360 3f091c7d3cea442473b1e3e555d80c4f 397 Pfam PF07470 Glycosyl Hydrolase Family 88 35 396 8.9E-93 T 14-10-2018 IPR010905 Glycosyl hydrolase, family 88 D172_018360 3f091c7d3cea442473b1e3e555d80c4f 397 Gene3D G3DSA:1.50.10.10 32 396 6.6E-134 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 D172_018360 3f091c7d3cea442473b1e3e555d80c4f 397 SUPERFAMILY SSF48208 51 396 3.23E-65 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 D172_006675 c540b06729f93589c8f41b7270a9a016 249 SUPERFAMILY SSF48452 134 242 3.25E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_006675 c540b06729f93589c8f41b7270a9a016 249 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 129 247 9.0E-42 T 14-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal D172_006675 c540b06729f93589c8f41b7270a9a016 249 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 2 249 17.69 T 14-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 D172_006675 c540b06729f93589c8f41b7270a9a016 249 Pfam PF13525 Outer membrane lipoprotein 126 248 2.3E-6 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like D172_006675 c540b06729f93589c8f41b7270a9a016 249 Gene3D G3DSA:1.20.5.110 32 108 1.2E-18 T 14-10-2018 D172_006675 c540b06729f93589c8f41b7270a9a016 249 Pfam PF16331 TolA binding protein trimerisation 34 107 2.7E-21 T 14-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 D172_006675 c540b06729f93589c8f41b7270a9a016 249 Gene3D G3DSA:1.25.40.10 129 249 4.1E-28 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_008755 67e314d8fa355c84daac0b2f19bad66a 210 SUPERFAMILY SSF52540 3 175 3.64E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_008755 67e314d8fa355c84daac0b2f19bad66a 210 Gene3D G3DSA:3.40.50.300 2 192 1.8E-22 T 14-10-2018 D172_012155 a93ecffbec340ba2e148350477d450b7 211 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 208 26.846 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 D172_012155 a93ecffbec340ba2e148350477d450b7 211 Gene3D G3DSA:3.40.50.620 1 208 2.2E-58 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_012155 a93ecffbec340ba2e148350477d450b7 211 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 2 61 5.3E-11 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D172_012155 a93ecffbec340ba2e148350477d450b7 211 Pfam PF01467 Cytidylyltransferase-like 4 159 7.3E-24 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D172_012155 a93ecffbec340ba2e148350477d450b7 211 SUPERFAMILY SSF52374 1 207 5.35E-47 T 14-10-2018 D172_012155 a93ecffbec340ba2e148350477d450b7 211 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 4 207 2.3E-47 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 D172_006970 12d8f4c6b364a978ea0b7a4fb918d073 312 Gene3D G3DSA:3.40.190.10 90 303 1.6E-56 T 14-10-2018 D172_006970 12d8f4c6b364a978ea0b7a4fb918d073 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 5.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_006970 12d8f4c6b364a978ea0b7a4fb918d073 312 Pfam PF03466 LysR substrate binding domain 94 305 5.7E-16 T 14-10-2018 IPR005119 LysR, substrate-binding D172_006970 12d8f4c6b364a978ea0b7a4fb918d073 312 SUPERFAMILY SSF53850 90 307 4.16E-39 T 14-10-2018 D172_006970 12d8f4c6b364a978ea0b7a4fb918d073 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_006970 12d8f4c6b364a978ea0b7a4fb918d073 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_006970 12d8f4c6b364a978ea0b7a4fb918d073 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_006970 12d8f4c6b364a978ea0b7a4fb918d073 312 Gene3D G3DSA:3.40.190.10 170 279 1.6E-56 T 14-10-2018 D172_006970 12d8f4c6b364a978ea0b7a4fb918d073 312 Gene3D G3DSA:1.10.10.10 1 88 1.0E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_006970 12d8f4c6b364a978ea0b7a4fb918d073 312 SUPERFAMILY SSF46785 2 84 2.53E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_011065 cbbb6b0bce02005aeb07b8d809a4dcda 285 Gene3D G3DSA:3.20.20.150 10 284 1.2E-82 T 14-10-2018 D172_011065 cbbb6b0bce02005aeb07b8d809a4dcda 285 Pfam PF05114 Protein of unknown function (DUF692) 12 272 3.6E-100 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 D172_011065 cbbb6b0bce02005aeb07b8d809a4dcda 285 SUPERFAMILY SSF51658 32 210 2.94E-13 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily D172_001360 a68a36c43dfcfba7561ae8fb921d8a58 501 Gene3D G3DSA:3.50.50.60 9 370 3.5E-141 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_001360 a68a36c43dfcfba7561ae8fb921d8a58 501 Pfam PF01266 FAD dependent oxidoreductase 9 327 1.5E-50 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 D172_001360 a68a36c43dfcfba7561ae8fb921d8a58 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 351 363 2.3E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D172_001360 a68a36c43dfcfba7561ae8fb921d8a58 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 317 323 2.3E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D172_001360 a68a36c43dfcfba7561ae8fb921d8a58 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 82 94 2.3E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D172_001360 a68a36c43dfcfba7561ae8fb921d8a58 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 21 31 2.3E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D172_001360 a68a36c43dfcfba7561ae8fb921d8a58 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 37 49 2.3E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D172_001360 a68a36c43dfcfba7561ae8fb921d8a58 501 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 8 20 2.3E-28 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D172_001360 a68a36c43dfcfba7561ae8fb921d8a58 501 SUPERFAMILY SSF51905 5 377 8.78E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_001360 a68a36c43dfcfba7561ae8fb921d8a58 501 SUPERFAMILY SSF54373 230 323 4.84E-8 T 14-10-2018 D172_001360 a68a36c43dfcfba7561ae8fb921d8a58 501 Gene3D G3DSA:1.10.8.870 395 464 9.9E-23 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D172_001360 a68a36c43dfcfba7561ae8fb921d8a58 501 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 385 479 4.6E-9 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D172_001360 a68a36c43dfcfba7561ae8fb921d8a58 501 Gene3D G3DSA:3.30.9.10 86 324 3.5E-141 T 14-10-2018 D172_001360 a68a36c43dfcfba7561ae8fb921d8a58 501 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 356 366 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D172_001360 a68a36c43dfcfba7561ae8fb921d8a58 501 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 13 30 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 D172_004380 75809fd1c0bad19571bd385c92bc033c 688 SMART SM00862 30 101 3.9E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_004380 75809fd1c0bad19571bd385c92bc033c 688 Pfam PF07676 WD40-like Beta Propeller Repeat 430 465 3.0E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller D172_004380 75809fd1c0bad19571bd385c92bc033c 688 SUPERFAMILY SSF46894 10 101 5.95E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_004380 75809fd1c0bad19571bd385c92bc033c 688 SUPERFAMILY SSF82171 146 562 1.57E-25 T 14-10-2018 D172_004380 75809fd1c0bad19571bd385c92bc033c 688 Gene3D G3DSA:2.120.10.30 142 401 7.1E-9 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_004380 75809fd1c0bad19571bd385c92bc033c 688 Gene3D G3DSA:2.120.10.30 404 599 2.3E-9 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_004380 75809fd1c0bad19571bd385c92bc033c 688 Pfam PF00486 Transcriptional regulatory protein, C terminal 34 101 2.5E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_004380 75809fd1c0bad19571bd385c92bc033c 688 Gene3D G3DSA:1.10.10.10 3 108 1.9E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_003485 cede5720e30cb60fcf848ffb1f6031b3 360 SMART SM00228 261 344 3.2E-5 T 14-10-2018 IPR001478 PDZ domain GO:0005515 D172_003485 cede5720e30cb60fcf848ffb1f6031b3 360 Pfam PF13180 PDZ domain 279 351 3.1E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 D172_003485 cede5720e30cb60fcf848ffb1f6031b3 360 Pfam PF13365 Trypsin-like peptidase domain 85 220 1.9E-29 T 14-10-2018 D172_003485 cede5720e30cb60fcf848ffb1f6031b3 360 SUPERFAMILY SSF50494 44 268 1.4E-56 T 14-10-2018 IPR009003 Peptidase S1, PA clan D172_003485 cede5720e30cb60fcf848ffb1f6031b3 360 Gene3D G3DSA:2.30.42.10 261 359 3.1E-15 T 14-10-2018 D172_003485 cede5720e30cb60fcf848ffb1f6031b3 360 SUPERFAMILY SSF50156 244 351 2.7E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 D172_003485 cede5720e30cb60fcf848ffb1f6031b3 360 Gene3D G3DSA:2.40.10.10 148 260 2.7E-32 T 14-10-2018 D172_003485 cede5720e30cb60fcf848ffb1f6031b3 360 Gene3D G3DSA:2.40.10.10 36 146 2.5E-30 T 14-10-2018 D172_003485 cede5720e30cb60fcf848ffb1f6031b3 360 PRINTS PR00834 HtrA/DegQ protease family signature 156 180 1.1E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D172_003485 cede5720e30cb60fcf848ffb1f6031b3 360 PRINTS PR00834 HtrA/DegQ protease family signature 94 106 1.1E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D172_003485 cede5720e30cb60fcf848ffb1f6031b3 360 PRINTS PR00834 HtrA/DegQ protease family signature 116 136 1.1E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D172_003485 cede5720e30cb60fcf848ffb1f6031b3 360 PRINTS PR00834 HtrA/DegQ protease family signature 302 314 1.1E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D172_003485 cede5720e30cb60fcf848ffb1f6031b3 360 PRINTS PR00834 HtrA/DegQ protease family signature 213 230 1.1E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D172_003485 cede5720e30cb60fcf848ffb1f6031b3 360 PRINTS PR00834 HtrA/DegQ protease family signature 191 208 1.1E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 D172_016440 2e734b8a5401659067cb769df949099a 386 Gene3D G3DSA:3.50.50.60 13 381 1.3E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_016440 2e734b8a5401659067cb769df949099a 386 Pfam PF04820 Tryptophan halogenase 107 380 7.0E-12 T 14-10-2018 IPR006905 Flavin-dependent halogenase D172_016440 2e734b8a5401659067cb769df949099a 386 Pfam PF04820 Tryptophan halogenase 13 66 1.1E-5 T 14-10-2018 IPR006905 Flavin-dependent halogenase D172_016440 2e734b8a5401659067cb769df949099a 386 SUPERFAMILY SSF51905 12 384 5.81E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_016440 2e734b8a5401659067cb769df949099a 386 Gene3D G3DSA:3.30.9.100 46 282 1.3E-82 T 14-10-2018 D172_016195 da7d6d35b4bc58a948ac541deb6d6e8d 206 SMART SM00363 96 160 8.3E-19 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016195 da7d6d35b4bc58a948ac541deb6d6e8d 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016195 da7d6d35b4bc58a948ac541deb6d6e8d 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 5.8E-33 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 D172_016195 da7d6d35b4bc58a948ac541deb6d6e8d 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 37.081 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 D172_016195 da7d6d35b4bc58a948ac541deb6d6e8d 206 SUPERFAMILY SSF55174 3 206 1.44E-73 T 14-10-2018 D172_016195 da7d6d35b4bc58a948ac541deb6d6e8d 206 Pfam PF01479 S4 domain 96 143 2.8E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016195 da7d6d35b4bc58a948ac541deb6d6e8d 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 4.2E-86 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 D172_016195 da7d6d35b4bc58a948ac541deb6d6e8d 206 Gene3D G3DSA:1.10.1050.10 6 206 3.6E-80 T 14-10-2018 D172_016195 da7d6d35b4bc58a948ac541deb6d6e8d 206 Gene3D G3DSA:3.10.290.10 95 191 3.6E-80 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D172_016195 da7d6d35b4bc58a948ac541deb6d6e8d 206 SMART SM01390 3 95 1.3E-50 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 D172_012150 cbfe8ed54dafec30a78d5cde59b25301 345 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 315 2.7E-10 T 14-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_012150 cbfe8ed54dafec30a78d5cde59b25301 345 SUPERFAMILY SSF48019 211 332 7.99E-24 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 D172_012150 cbfe8ed54dafec30a78d5cde59b25301 345 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 332 1.7E-71 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 D172_012150 cbfe8ed54dafec30a78d5cde59b25301 345 Gene3D G3DSA:1.20.272.10 214 338 2.0E-30 T 14-10-2018 D172_012150 cbfe8ed54dafec30a78d5cde59b25301 345 Gene3D G3DSA:1.10.8.60 144 211 1.5E-14 T 14-10-2018 D172_012150 cbfe8ed54dafec30a78d5cde59b25301 345 SUPERFAMILY SSF52540 1 208 5.84E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_012150 cbfe8ed54dafec30a78d5cde59b25301 345 Pfam PF06144 DNA polymerase III, delta subunit 20 189 1.1E-31 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 D172_012150 cbfe8ed54dafec30a78d5cde59b25301 345 Gene3D G3DSA:3.40.50.300 1 139 4.1E-46 T 14-10-2018 D172_001740 137fe165059439e0337b955119afef5f 389 TIGRFAM TIGR01933 hflK: HflK protein 78 338 2.6E-110 T 14-10-2018 IPR010201 HflK GO:0016021 D172_001740 137fe165059439e0337b955119afef5f 389 Pfam PF01145 SPFH domain / Band 7 family 80 251 6.5E-26 T 14-10-2018 IPR001107 Band 7 domain D172_001740 137fe165059439e0337b955119afef5f 389 Gene3D G3DSA:3.30.479.30 117 227 8.2E-18 T 14-10-2018 D172_001740 137fe165059439e0337b955119afef5f 389 Pfam PF12221 Bacterial membrane protein N terminal 1 47 5.2E-17 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal D172_001740 137fe165059439e0337b955119afef5f 389 PRINTS PR00721 Stomatin signature 83 105 2.5E-5 T 14-10-2018 IPR001972 Stomatin family GO:0016020 D172_001740 137fe165059439e0337b955119afef5f 389 PRINTS PR00721 Stomatin signature 212 230 2.5E-5 T 14-10-2018 IPR001972 Stomatin family GO:0016020 D172_001740 137fe165059439e0337b955119afef5f 389 PRINTS PR00721 Stomatin signature 130 151 2.5E-5 T 14-10-2018 IPR001972 Stomatin family GO:0016020 D172_001740 137fe165059439e0337b955119afef5f 389 SUPERFAMILY SSF117892 109 241 1.57E-20 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily D172_001740 137fe165059439e0337b955119afef5f 389 SMART SM00244 76 236 3.2E-42 T 14-10-2018 IPR001107 Band 7 domain D172_000785 62a1636181528b4cab39a8e248c08d8a 613 Gene3D G3DSA:3.40.50.10090 5 232 1.5E-57 T 14-10-2018 D172_000785 62a1636181528b4cab39a8e248c08d8a 613 SUPERFAMILY SSF69618 1 240 6.15E-45 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D172_000785 62a1636181528b4cab39a8e248c08d8a 613 Gene3D G3DSA:3.40.50.10090 35 155 1.5E-57 T 14-10-2018 D172_000785 62a1636181528b4cab39a8e248c08d8a 613 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 289 612 2.7E-41 T 14-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX D172_000785 62a1636181528b4cab39a8e248c08d8a 613 Pfam PF02602 Uroporphyrinogen-III synthase HemD 15 236 1.9E-32 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 D172_000060 88a21ff415303cfdb5f0ea029732ee21 373 Gene3D G3DSA:3.10.350.10 31 78 3.2E-13 T 14-10-2018 IPR036779 LysM domain superfamily D172_000060 88a21ff415303cfdb5f0ea029732ee21 373 Pfam PF01476 LysM domain 33 78 3.3E-12 T 14-10-2018 IPR018392 LysM domain D172_000060 88a21ff415303cfdb5f0ea029732ee21 373 SMART SM00257 32 80 2.3E-4 T 14-10-2018 IPR018392 LysM domain D172_000060 88a21ff415303cfdb5f0ea029732ee21 373 SUPERFAMILY SSF54106 32 79 1.57E-7 T 14-10-2018 D172_016080 cee59708c5268524ee6e5c0655f54624 214 SUPERFAMILY SSF51735 1 201 6.61E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_016080 cee59708c5268524ee6e5c0655f54624 214 Gene3D G3DSA:3.40.50.720 1 209 3.5E-57 T 14-10-2018 D172_016080 cee59708c5268524ee6e5c0655f54624 214 Pfam PF13460 NAD(P)H-binding 9 163 1.5E-8 T 14-10-2018 IPR016040 NAD(P)-binding domain D172_012615 0247e26d4938f1d783f1e05c23b44191 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 137 1.4E-8 T 14-10-2018 IPR001451 Hexapeptide repeat D172_012615 0247e26d4938f1d783f1e05c23b44191 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 46 3.1E-11 T 14-10-2018 IPR001451 Hexapeptide repeat D172_012615 0247e26d4938f1d783f1e05c23b44191 256 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 255 2.3E-24 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 D172_012615 0247e26d4938f1d783f1e05c23b44191 256 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 43.307 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 D172_012615 0247e26d4938f1d783f1e05c23b44191 256 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 147 175 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D172_012615 0247e26d4938f1d783f1e05c23b44191 256 Gene3D G3DSA:1.20.1180.10 191 256 2.2E-22 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 D172_012615 0247e26d4938f1d783f1e05c23b44191 256 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 255 6.3E-103 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 D172_012615 0247e26d4938f1d783f1e05c23b44191 256 PIRSF PIRSF000456 1 256 4.6E-103 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 D172_012615 0247e26d4938f1d783f1e05c23b44191 256 SUPERFAMILY SSF51161 2 256 2.83E-79 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily D172_012615 0247e26d4938f1d783f1e05c23b44191 256 Gene3D G3DSA:2.160.10.10 1 187 5.9E-54 T 14-10-2018 D172_010360 ee20c9894e7c2ae9fde8b72886cd1bc3 224 SUPERFAMILY SSF51206 8 144 2.23E-28 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like D172_010360 ee20c9894e7c2ae9fde8b72886cd1bc3 224 SMART SM00100 14 135 1.8E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain D172_010360 ee20c9894e7c2ae9fde8b72886cd1bc3 224 SUPERFAMILY SSF46785 149 221 1.38E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_010360 ee20c9894e7c2ae9fde8b72886cd1bc3 224 Gene3D G3DSA:2.60.120.10 4 148 2.7E-24 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_010360 ee20c9894e7c2ae9fde8b72886cd1bc3 224 Pfam PF00027 Cyclic nucleotide-binding domain 34 119 2.7E-18 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain D172_010360 ee20c9894e7c2ae9fde8b72886cd1bc3 224 Gene3D G3DSA:1.10.10.10 149 221 2.7E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_010360 ee20c9894e7c2ae9fde8b72886cd1bc3 224 Pfam PF13545 Crp-like helix-turn-helix domain 152 219 4.5E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D172_010360 ee20c9894e7c2ae9fde8b72886cd1bc3 224 SMART SM00419 165 213 5.5E-5 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D172_013725 c0650308ae2ee72e2535f02554e8aea7 230 TIGRFAM TIGR00613 reco: DNA repair protein RecO 10 165 8.6E-20 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 D172_013725 c0650308ae2ee72e2535f02554e8aea7 230 Hamap MF_00201 DNA repair protein RecO [recO]. 2 229 17.316 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 D172_013725 c0650308ae2ee72e2535f02554e8aea7 230 SUPERFAMILY SSF50249 6 76 3.94E-6 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_013725 c0650308ae2ee72e2535f02554e8aea7 230 Gene3D G3DSA:1.20.1440.120 80 230 3.6E-47 T 14-10-2018 D172_013725 c0650308ae2ee72e2535f02554e8aea7 230 Pfam PF11967 Recombination protein O N terminal 7 76 7.8E-12 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal D172_013725 c0650308ae2ee72e2535f02554e8aea7 230 SUPERFAMILY SSF57863 87 149 9.15E-10 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger D172_013725 c0650308ae2ee72e2535f02554e8aea7 230 Gene3D G3DSA:2.40.50.140 4 77 6.5E-20 T 14-10-2018 D172_013725 c0650308ae2ee72e2535f02554e8aea7 230 Pfam PF02565 Recombination protein O C terminal 84 224 1.4E-19 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 D172_002915 a7d5c7e6b929f90667f39b4891140ac9 220 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 54 63 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D172_002915 a7d5c7e6b929f90667f39b4891140ac9 220 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 1 219 38.871 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D172_002915 a7d5c7e6b929f90667f39b4891140ac9 220 Pfam PF03167 Uracil DNA glycosylase superfamily 52 207 2.4E-25 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D172_002915 a7d5c7e6b929f90667f39b4891140ac9 220 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 2 211 3.6E-83 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D172_002915 a7d5c7e6b929f90667f39b4891140ac9 220 SUPERFAMILY SSF52141 2 220 8.72E-92 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D172_002915 a7d5c7e6b929f90667f39b4891140ac9 220 SMART SM00986 46 208 5.6E-42 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D172_002915 a7d5c7e6b929f90667f39b4891140ac9 220 Gene3D G3DSA:3.40.470.10 1 220 1.4E-99 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D172_002915 a7d5c7e6b929f90667f39b4891140ac9 220 SMART SM00987 46 208 5.6E-42 T 14-10-2018 D172_009560 d22299d2f06bf9a39b5f734e33780641 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site D172_009560 d22299d2f06bf9a39b5f734e33780641 152 SUPERFAMILY SSF54909 63 152 9.39E-18 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel D172_009560 d22299d2f06bf9a39b5f734e33780641 152 Gene3D G3DSA:1.10.10.10 4 55 2.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_009560 d22299d2f06bf9a39b5f734e33780641 152 SMART SM00344 3 112 9.7E-38 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 D172_009560 d22299d2f06bf9a39b5f734e33780641 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 3.4E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_009560 d22299d2f06bf9a39b5f734e33780641 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 3.4E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_009560 d22299d2f06bf9a39b5f734e33780641 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 3.4E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_009560 d22299d2f06bf9a39b5f734e33780641 152 SUPERFAMILY SSF46785 3 63 7.75E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_009560 d22299d2f06bf9a39b5f734e33780641 152 Gene3D G3DSA:3.30.70.920 56 139 1.1E-21 T 14-10-2018 D172_009560 d22299d2f06bf9a39b5f734e33780641 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 8.2E-20 T 14-10-2018 D172_009560 d22299d2f06bf9a39b5f734e33780641 152 Pfam PF01037 Lrp/AsnC ligand binding domain 70 141 2.8E-16 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D172_002210 948d2870f70668f0e01c62360819f4eb 251 Gene3D G3DSA:3.20.20.370 12 242 4.4E-78 T 14-10-2018 D172_002210 948d2870f70668f0e01c62360819f4eb 251 Pfam PF04748 Divergent polysaccharide deacetylase 23 233 3.3E-72 T 14-10-2018 IPR006837 Divergent polysaccharide deacetylase D172_002210 948d2870f70668f0e01c62360819f4eb 251 SUPERFAMILY SSF88713 19 233 2.78E-68 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 D172_017075 ba80315765cc44fb0c6f0ff359463596 189 Gene3D G3DSA:3.30.70.2150 8 113 2.9E-17 T 14-10-2018 D172_018655 f7973fc10d21f0b4c8324b70f7850475 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 9.0E-13 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain D172_018655 f7973fc10d21f0b4c8324b70f7850475 64 Gene3D G3DSA:1.10.10.1100 1 57 1.0E-20 T 14-10-2018 D172_018940 971e0e3b9f566a25279f34c0bc113d03 284 Gene3D G3DSA:1.10.575.10 27 278 3.0E-66 T 14-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 D172_018940 971e0e3b9f566a25279f34c0bc113d03 284 SUPERFAMILY SSF48537 27 266 8.63E-58 T 14-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 D172_018940 971e0e3b9f566a25279f34c0bc113d03 284 Pfam PF02265 S1/P1 Nuclease 27 267 3.4E-66 T 14-10-2018 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 D172_015545 e6dd295b4836c4f410c3bb1159199a3d 979 Pfam PF00593 TonB dependent receptor 358 977 2.2E-30 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_015545 e6dd295b4836c4f410c3bb1159199a3d 979 Gene3D G3DSA:2.170.130.10 38 168 2.6E-24 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_015545 e6dd295b4836c4f410c3bb1159199a3d 979 SUPERFAMILY SSF56935 51 979 1.92E-82 T 14-10-2018 D172_015545 e6dd295b4836c4f410c3bb1159199a3d 979 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 50 979 1.6E-209 T 14-10-2018 IPR023996 TonB-dependent outer membrane protein, SusC/RagA D172_015545 e6dd295b4836c4f410c3bb1159199a3d 979 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 139 169 1.8E-13 T 14-10-2018 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site D172_015545 e6dd295b4836c4f410c3bb1159199a3d 979 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 163 5.5E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_001935 49d5e4033769a4a97cce88085d8de0d7 495 Gene3D G3DSA:1.10.3210.10 304 495 8.4E-61 T 14-10-2018 D172_001935 49d5e4033769a4a97cce88085d8de0d7 495 SUPERFAMILY SSF109604 307 490 6.73E-48 T 14-10-2018 D172_001935 49d5e4033769a4a97cce88085d8de0d7 495 Gene3D G3DSA:3.30.420.150 111 289 1.5E-82 T 14-10-2018 D172_001935 49d5e4033769a4a97cce88085d8de0d7 495 SUPERFAMILY SSF53067 131 302 9.5E-43 T 14-10-2018 D172_001935 49d5e4033769a4a97cce88085d8de0d7 495 Gene3D G3DSA:3.30.420.40 8 296 1.5E-82 T 14-10-2018 D172_001935 49d5e4033769a4a97cce88085d8de0d7 495 SUPERFAMILY SSF53067 7 127 1.49E-31 T 14-10-2018 D172_001935 49d5e4033769a4a97cce88085d8de0d7 495 PIRSF PIRSF001267 1 495 1.2E-175 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 D172_001935 49d5e4033769a4a97cce88085d8de0d7 495 Pfam PF02541 Ppx/GppA phosphatase family 20 301 1.5E-76 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 D172_007315 d82836aecd9fd86cb60a2e43805f4e30 383 Gene3D G3DSA:3.40.50.2000 186 367 6.1E-44 T 14-10-2018 D172_007315 d82836aecd9fd86cb60a2e43805f4e30 383 SUPERFAMILY SSF53756 16 382 7.85E-51 T 14-10-2018 D172_007315 d82836aecd9fd86cb60a2e43805f4e30 383 Gene3D G3DSA:3.40.50.2000 24 376 6.1E-44 T 14-10-2018 D172_007315 d82836aecd9fd86cb60a2e43805f4e30 383 Pfam PF00534 Glycosyl transferases group 1 200 344 2.4E-20 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 D172_004855 38d0a538c149356f007adb8c608e5ed9 112 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 112 35.32 T 14-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 D172_004855 38d0a538c149356f007adb8c608e5ed9 112 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 7 112 1.4E-36 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 D172_004855 38d0a538c149356f007adb8c608e5ed9 112 Gene3D G3DSA:2.60.300.12 6 112 3.0E-31 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D172_004855 38d0a538c149356f007adb8c608e5ed9 112 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 93 110 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 D172_004855 38d0a538c149356f007adb8c608e5ed9 112 SUPERFAMILY SSF89360 5 98 7.26E-29 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D172_004855 38d0a538c149356f007adb8c608e5ed9 112 Pfam PF01521 Iron-sulphur cluster biosynthesis 7 107 3.6E-18 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 D172_009555 8b6b86bf74da0f627a61d765e9b91311 518 Pfam PF00916 Sulfate permease family 154 374 7.4E-29 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 D172_009555 8b6b86bf74da0f627a61d765e9b91311 518 Pfam PF00916 Sulfate permease family 14 138 2.6E-26 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 D172_009555 8b6b86bf74da0f627a61d765e9b91311 518 Gene3D G3DSA:3.30.750.24 408 497 2.9E-27 T 14-10-2018 IPR036513 STAS domain superfamily D172_009555 8b6b86bf74da0f627a61d765e9b91311 518 SUPERFAMILY SSF52091 412 497 2.16E-9 T 14-10-2018 IPR036513 STAS domain superfamily D172_009555 8b6b86bf74da0f627a61d765e9b91311 518 Pfam PF01740 STAS domain 414 497 1.9E-5 T 14-10-2018 IPR002645 STAS domain D172_005650 353d222de7c0780af98cf9a0c624504e 292 Gene3D G3DSA:3.30.1330.60 177 292 1.4E-32 T 14-10-2018 IPR036737 OmpA-like domain superfamily D172_005650 353d222de7c0780af98cf9a0c624504e 292 Gene3D G3DSA:2.60.40.2540 23 176 1.1E-48 T 14-10-2018 D172_005650 353d222de7c0780af98cf9a0c624504e 292 SUPERFAMILY SSF103088 158 289 5.62E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily D172_005650 353d222de7c0780af98cf9a0c624504e 292 Pfam PF00691 OmpA family 188 283 2.2E-20 T 14-10-2018 IPR006665 OmpA-like domain D172_005650 353d222de7c0780af98cf9a0c624504e 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 4 28 1.2E-57 T 14-10-2018 D172_005650 353d222de7c0780af98cf9a0c624504e 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 86 104 1.2E-57 T 14-10-2018 D172_005650 353d222de7c0780af98cf9a0c624504e 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 105 122 1.2E-57 T 14-10-2018 D172_005650 353d222de7c0780af98cf9a0c624504e 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 149 168 1.2E-57 T 14-10-2018 D172_005650 353d222de7c0780af98cf9a0c624504e 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 46 64 1.2E-57 T 14-10-2018 D172_005650 353d222de7c0780af98cf9a0c624504e 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 205 231 1.2E-57 T 14-10-2018 D172_005650 353d222de7c0780af98cf9a0c624504e 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 234 251 1.2E-57 T 14-10-2018 D172_005650 353d222de7c0780af98cf9a0c624504e 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 124 146 1.2E-57 T 14-10-2018 D172_005650 353d222de7c0780af98cf9a0c624504e 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 175 202 1.2E-57 T 14-10-2018 D172_005650 353d222de7c0780af98cf9a0c624504e 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 272 292 1.2E-57 T 14-10-2018 D172_005650 353d222de7c0780af98cf9a0c624504e 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 29 45 1.2E-57 T 14-10-2018 D172_005650 353d222de7c0780af98cf9a0c624504e 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 252 271 1.2E-57 T 14-10-2018 D172_005650 353d222de7c0780af98cf9a0c624504e 292 PRINTS PR01021 OMPA domain signature 234 250 2.0E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D172_005650 353d222de7c0780af98cf9a0c624504e 292 PRINTS PR01021 OMPA domain signature 188 210 2.0E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D172_005650 353d222de7c0780af98cf9a0c624504e 292 PRINTS PR01021 OMPA domain signature 219 234 2.0E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D172_016830 844f6145fe8bd3b5a10e8b5c013d5974 123 Pfam PF01230 HIT domain 13 109 1.1E-27 T 14-10-2018 IPR001310 Histidine triad (HIT) protein D172_016830 844f6145fe8bd3b5a10e8b5c013d5974 123 PRINTS PR00332 Histidine triad family signature 6 22 1.0E-20 T 14-10-2018 IPR001310 Histidine triad (HIT) protein D172_016830 844f6145fe8bd3b5a10e8b5c013d5974 123 PRINTS PR00332 Histidine triad family signature 95 105 1.0E-20 T 14-10-2018 IPR001310 Histidine triad (HIT) protein D172_016830 844f6145fe8bd3b5a10e8b5c013d5974 123 PRINTS PR00332 Histidine triad family signature 27 45 1.0E-20 T 14-10-2018 IPR001310 Histidine triad (HIT) protein D172_016830 844f6145fe8bd3b5a10e8b5c013d5974 123 SUPERFAMILY SSF54197 1 114 1.42E-38 T 14-10-2018 IPR036265 HIT-like superfamily D172_016830 844f6145fe8bd3b5a10e8b5c013d5974 123 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 14-10-2018 IPR019808 Histidine triad, conserved site D172_016830 844f6145fe8bd3b5a10e8b5c013d5974 123 Gene3D G3DSA:3.30.428.10 1 115 3.2E-39 T 14-10-2018 IPR036265 HIT-like superfamily D172_007570 f6c4ff30b1fe5c6ffc2674374e39c620 465 ProSitePatterns PS00217 Sugar transport proteins signature 2. 109 134 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D172_007570 f6c4ff30b1fe5c6ffc2674374e39c620 465 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 84 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D172_007570 f6c4ff30b1fe5c6ffc2674374e39c620 465 Gene3D G3DSA:1.20.1250.20 225 465 2.8E-61 T 14-10-2018 D172_007570 f6c4ff30b1fe5c6ffc2674374e39c620 465 Gene3D G3DSA:1.20.1250.20 2 224 3.0E-61 T 14-10-2018 D172_007570 f6c4ff30b1fe5c6ffc2674374e39c620 465 PRINTS PR00171 Sugar transporter signature 21 31 8.7E-25 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_007570 f6c4ff30b1fe5c6ffc2674374e39c620 465 PRINTS PR00171 Sugar transporter signature 391 403 8.7E-25 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_007570 f6c4ff30b1fe5c6ffc2674374e39c620 465 PRINTS PR00171 Sugar transporter signature 104 123 8.7E-25 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_007570 f6c4ff30b1fe5c6ffc2674374e39c620 465 PRINTS PR00171 Sugar transporter signature 368 389 8.7E-25 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_007570 f6c4ff30b1fe5c6ffc2674374e39c620 465 PRINTS PR00171 Sugar transporter signature 272 282 8.7E-25 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_007570 f6c4ff30b1fe5c6ffc2674374e39c620 465 ProSitePatterns PS00216 Sugar transport proteins signature 1. 316 333 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D172_007570 f6c4ff30b1fe5c6ffc2674374e39c620 465 SUPERFAMILY SSF103473 1 463 7.32E-70 T 14-10-2018 IPR036259 MFS transporter superfamily D172_007570 f6c4ff30b1fe5c6ffc2674374e39c620 465 Pfam PF00083 Sugar (and other) transporter 13 463 1.0E-115 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 D172_007570 f6c4ff30b1fe5c6ffc2674374e39c620 465 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 5 463 1.8E-113 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_007575 06c901ac0771abe66eae355f9971888a 918 SMART SM00606 670 798 4.2E-34 T 14-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 D172_007575 06c901ac0771abe66eae355f9971888a 918 SMART SM00637 817 917 6.7E-28 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 D172_007575 06c901ac0771abe66eae355f9971888a 918 Gene3D G3DSA:1.50.10.10 159 545 8.0E-144 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 D172_007575 06c901ac0771abe66eae355f9971888a 918 Pfam PF03422 Carbohydrate binding module (family 6) 678 798 3.8E-31 T 14-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 D172_007575 06c901ac0771abe66eae355f9971888a 918 Gene3D G3DSA:2.60.120.260 673 798 7.9E-37 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_007575 06c901ac0771abe66eae355f9971888a 918 Gene3D G3DSA:2.60.40.290 812 918 1.0E-21 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 D172_007575 06c901ac0771abe66eae355f9971888a 918 Pfam PF00553 Cellulose binding domain 818 917 2.2E-24 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 D172_007575 06c901ac0771abe66eae355f9971888a 918 SUPERFAMILY SSF49384 811 917 2.67E-24 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 D172_007575 06c901ac0771abe66eae355f9971888a 918 PRINTS PR00735 Glycosyl hydrolase family 8 signature 530 544 2.2E-8 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 D172_007575 06c901ac0771abe66eae355f9971888a 918 PRINTS PR00735 Glycosyl hydrolase family 8 signature 430 439 2.2E-8 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 D172_007575 06c901ac0771abe66eae355f9971888a 918 PRINTS PR00735 Glycosyl hydrolase family 8 signature 226 239 2.2E-8 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 D172_007575 06c901ac0771abe66eae355f9971888a 918 PRINTS PR00735 Glycosyl hydrolase family 8 signature 285 303 2.2E-8 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 D172_007575 06c901ac0771abe66eae355f9971888a 918 SUPERFAMILY SSF49785 31 145 9.96E-16 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_007575 06c901ac0771abe66eae355f9971888a 918 Gene3D G3DSA:2.60.120.260 15 146 2.0E-32 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_007575 06c901ac0771abe66eae355f9971888a 918 Pfam PF01270 Glycosyl hydrolases family 8 223 543 3.0E-24 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 D172_007575 06c901ac0771abe66eae355f9971888a 918 SUPERFAMILY SSF48208 167 551 9.07E-95 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 D172_007575 06c901ac0771abe66eae355f9971888a 918 SUPERFAMILY SSF49785 671 796 6.38E-34 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_014270 9cc63ccc4e46feae48e21412d8dc874f 285 SUPERFAMILY SSF48452 116 254 3.29E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_014270 9cc63ccc4e46feae48e21412d8dc874f 285 SUPERFAMILY SSF52833 2 115 1.14E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_014270 9cc63ccc4e46feae48e21412d8dc874f 285 Gene3D G3DSA:1.25.40.10 116 199 8.2E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_014270 9cc63ccc4e46feae48e21412d8dc874f 285 Gene3D G3DSA:3.40.30.10 1 115 3.6E-19 T 14-10-2018 D172_014270 9cc63ccc4e46feae48e21412d8dc874f 285 Gene3D G3DSA:1.25.40.10 200 285 3.4E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_014270 9cc63ccc4e46feae48e21412d8dc874f 285 Pfam PF14561 Tetratricopeptide repeat 199 285 4.5E-22 T 14-10-2018 D172_014270 9cc63ccc4e46feae48e21412d8dc874f 285 Pfam PF14559 Tetratricopeptide repeat 131 193 4.8E-11 T 14-10-2018 D172_014270 9cc63ccc4e46feae48e21412d8dc874f 285 Pfam PF00085 Thioredoxin 5 112 1.2E-10 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 D172_010390 65bcd66dfd5f27c845b259f94f688ff4 442 Gene3D G3DSA:3.20.20.80 11 442 2.4E-154 T 14-10-2018 D172_010390 65bcd66dfd5f27c845b259f94f688ff4 442 SUPERFAMILY SSF51445 15 441 3.12E-147 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_010390 65bcd66dfd5f27c845b259f94f688ff4 442 TIGRFAM TIGR03356 BGL: beta-galactosidase 14 435 6.1E-177 T 14-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 D172_010390 65bcd66dfd5f27c845b259f94f688ff4 442 Pfam PF00232 Glycosyl hydrolase family 1 14 441 3.2E-142 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 D172_010390 65bcd66dfd5f27c845b259f94f688ff4 442 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 406 1.4E-21 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 D172_010390 65bcd66dfd5f27c845b259f94f688ff4 442 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 379 1.4E-21 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 D172_010390 65bcd66dfd5f27c845b259f94f688ff4 442 PRINTS PR00131 Glycosyl hydrolase family 1 signature 348 356 1.4E-21 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 D172_010390 65bcd66dfd5f27c845b259f94f688ff4 442 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 425 1.4E-21 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 D172_010390 65bcd66dfd5f27c845b259f94f688ff4 442 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 1.4E-21 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 D172_010390 65bcd66dfd5f27c845b259f94f688ff4 442 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 17 31 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site D172_010390 65bcd66dfd5f27c845b259f94f688ff4 442 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 348 356 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site D172_014165 11f7e8403cc77ffd20d3e54a071e310d 242 SUPERFAMILY SSF56112 55 189 3.64E-15 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily D172_014165 11f7e8403cc77ffd20d3e54a071e310d 242 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 236 31.131 T 14-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 D172_014165 11f7e8403cc77ffd20d3e54a071e310d 242 Gene3D G3DSA:1.10.510.10 144 241 2.8E-13 T 14-10-2018 D172_014165 11f7e8403cc77ffd20d3e54a071e310d 242 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 234 1.1E-55 T 14-10-2018 D172_008400 037b238ac36e00bf0ed10d6f19b85546 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 3.9E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_008400 037b238ac36e00bf0ed10d6f19b85546 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 80 93 3.9E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_008400 037b238ac36e00bf0ed10d6f19b85546 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 198 212 3.9E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_008400 037b238ac36e00bf0ed10d6f19b85546 255 PRINTS PR00111 Alpha/beta hydrolase fold signature 37 52 3.9E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_008400 037b238ac36e00bf0ed10d6f19b85546 255 Pfam PF12697 Alpha/beta hydrolase family 14 246 1.8E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_008400 037b238ac36e00bf0ed10d6f19b85546 255 PRINTS PR00412 Epoxide hydrolase signature 37 52 2.4E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D172_008400 037b238ac36e00bf0ed10d6f19b85546 255 PRINTS PR00412 Epoxide hydrolase signature 94 107 2.4E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D172_008400 037b238ac36e00bf0ed10d6f19b85546 255 PRINTS PR00412 Epoxide hydrolase signature 229 251 2.4E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D172_008400 037b238ac36e00bf0ed10d6f19b85546 255 PRINTS PR00412 Epoxide hydrolase signature 80 93 2.4E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D172_008400 037b238ac36e00bf0ed10d6f19b85546 255 Gene3D G3DSA:3.40.50.1820 1 253 4.4E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_008400 037b238ac36e00bf0ed10d6f19b85546 255 SUPERFAMILY SSF53474 2 252 9.89E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_002330 a5150a40820dec187ff44822f5600baa 281 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 12 280 1.0E-94 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 D172_002330 a5150a40820dec187ff44822f5600baa 281 Gene3D G3DSA:3.20.20.70 124 270 8.1E-114 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_002330 a5150a40820dec187ff44822f5600baa 281 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 116 279 5.6E-59 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 D172_002330 a5150a40820dec187ff44822f5600baa 281 SUPERFAMILY SSF54675 4 114 5.3E-30 T 14-10-2018 D172_002330 a5150a40820dec187ff44822f5600baa 281 SUPERFAMILY SSF51690 116 280 5.49E-57 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 D172_002330 a5150a40820dec187ff44822f5600baa 281 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 27 113 8.7E-26 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 D172_002330 a5150a40820dec187ff44822f5600baa 281 PIRSF PIRSF006250 3 281 3.8E-101 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 D172_002330 a5150a40820dec187ff44822f5600baa 281 Gene3D G3DSA:3.90.1170.20 8 279 8.1E-114 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 D172_018925 fd2aba58e342605df6e69f78cca29874 143 Gene3D G3DSA:1.10.10.10 1 142 1.3E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_018925 fd2aba58e342605df6e69f78cca29874 143 Pfam PF01047 MarR family 34 91 1.1E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_018925 fd2aba58e342605df6e69f78cca29874 143 SUPERFAMILY SSF46785 4 141 9.11E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_018925 fd2aba58e342605df6e69f78cca29874 143 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site D172_018925 fd2aba58e342605df6e69f78cca29874 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 1.4E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_018925 fd2aba58e342605df6e69f78cca29874 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 1.4E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_018925 fd2aba58e342605df6e69f78cca29874 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 1.4E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_018925 fd2aba58e342605df6e69f78cca29874 143 SMART SM00347 27 127 1.8E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 6 864 0.0 T 14-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 Gene3D G3DSA:1.10.1440.20 566 623 4.1E-9 T 14-10-2018 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 SUPERFAMILY SSF53732 18 591 8.37E-183 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 Pfam PF00330 Aconitase family (aconitate hydratase) 74 537 1.5E-143 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 PRINTS PR00415 Aconitase family signature 406 417 1.9E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 PRINTS PR00415 Aconitase family signature 142 155 1.9E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 PRINTS PR00415 Aconitase family signature 166 174 1.9E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 PRINTS PR00415 Aconitase family signature 271 284 1.9E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 PRINTS PR00415 Aconitase family signature 364 378 1.9E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 PRINTS PR00415 Aconitase family signature 468 481 1.9E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 PRINTS PR00415 Aconitase family signature 195 208 1.9E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 PRINTS PR00415 Aconitase family signature 285 298 1.9E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 PRINTS PR00415 Aconitase family signature 209 224 1.9E-27 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 Pfam PF00694 Aconitase C-terminal domain 661 793 9.0E-29 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 SUPERFAMILY SSF52016 603 862 2.94E-66 T 14-10-2018 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 Gene3D G3DSA:3.30.499.20 7 363 2.5E-129 T 14-10-2018 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 Gene3D G3DSA:3.20.19.10 624 863 4.3E-81 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 D172_007110 60222f2069b04f7a291a68de6c1f54ec 869 Gene3D G3DSA:3.30.499.10 365 565 1.2E-74 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 D172_000410 8b161b7c6b74e7fc4b742d3e281e5397 254 SMART SM01134 70 231 2.1E-55 T 14-10-2018 D172_000410 8b161b7c6b74e7fc4b742d3e281e5397 254 SMART SM00420 9 61 4.1E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 D172_000410 8b161b7c6b74e7fc4b742d3e281e5397 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 4.8E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 D172_000410 8b161b7c6b74e7fc4b742d3e281e5397 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 4.8E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 D172_000410 8b161b7c6b74e7fc4b742d3e281e5397 254 Pfam PF00455 DeoR C terminal sensor domain 74 230 5.0E-42 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain D172_000410 8b161b7c6b74e7fc4b742d3e281e5397 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 D172_000410 8b161b7c6b74e7fc4b742d3e281e5397 254 Pfam PF08220 DeoR-like helix-turn-helix domain 9 61 7.2E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 D172_000410 8b161b7c6b74e7fc4b742d3e281e5397 254 SUPERFAMILY SSF46785 7 64 4.49E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_000410 8b161b7c6b74e7fc4b742d3e281e5397 254 SUPERFAMILY SSF100950 75 230 1.33E-30 T 14-10-2018 IPR037171 NagB/RpiA transferase-like D172_010170 5395cee9caadd866c0eade93ce349a30 192 Pfam PF01965 DJ-1/PfpI family 13 183 6.8E-46 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 D172_010170 5395cee9caadd866c0eade93ce349a30 192 Gene3D G3DSA:3.40.50.880 5 191 2.3E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_010170 5395cee9caadd866c0eade93ce349a30 192 SUPERFAMILY SSF52317 5 185 5.81E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_010170 5395cee9caadd866c0eade93ce349a30 192 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 14 182 6.1E-48 T 14-10-2018 IPR006286 Deglycase PfpI D172_007070 e09a44cb0e4d1be55bda7fb2f1e60cea 304 Pfam PF13177 DNA polymerase III, delta subunit 9 170 4.8E-42 T 14-10-2018 D172_007070 e09a44cb0e4d1be55bda7fb2f1e60cea 304 Gene3D G3DSA:3.40.50.300 1 170 4.5E-47 T 14-10-2018 D172_007070 e09a44cb0e4d1be55bda7fb2f1e60cea 304 SUPERFAMILY SSF52540 3 186 2.15E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_009595 51a2349c7e34312327bd3a62e96d88f6 577 Pfam PF13193 AMP-binding enzyme C-terminal domain 482 557 3.8E-14 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain D172_009595 51a2349c7e34312327bd3a62e96d88f6 577 Gene3D G3DSA:3.40.50.12780 35 468 1.9E-113 T 14-10-2018 D172_009595 51a2349c7e34312327bd3a62e96d88f6 577 ProSitePatterns PS00455 Putative AMP-binding domain signature. 223 234 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_009595 51a2349c7e34312327bd3a62e96d88f6 577 Gene3D G3DSA:3.30.300.30 469 573 3.5E-31 T 14-10-2018 D172_009595 51a2349c7e34312327bd3a62e96d88f6 577 Pfam PF00501 AMP-binding enzyme 45 473 1.6E-103 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_009595 51a2349c7e34312327bd3a62e96d88f6 577 SUPERFAMILY SSF56801 12 570 1.15E-149 T 14-10-2018 D172_011000 1b2493364b580b68684ff210103013da 295 PRINTS PR01438 Universal stress protein signature 251 263 1.9E-6 T 14-10-2018 IPR006015 Universal stress protein A D172_011000 1b2493364b580b68684ff210103013da 295 PRINTS PR01438 Universal stress protein signature 269 291 1.9E-6 T 14-10-2018 IPR006015 Universal stress protein A D172_011000 1b2493364b580b68684ff210103013da 295 PRINTS PR01438 Universal stress protein signature 3 21 1.9E-6 T 14-10-2018 IPR006015 Universal stress protein A D172_011000 1b2493364b580b68684ff210103013da 295 SUPERFAMILY SSF52402 1 139 1.84E-5 T 14-10-2018 D172_011000 1b2493364b580b68684ff210103013da 295 SUPERFAMILY SSF52402 150 293 2.18E-14 T 14-10-2018 D172_011000 1b2493364b580b68684ff210103013da 295 Pfam PF00582 Universal stress protein family 165 290 2.9E-8 T 14-10-2018 IPR006016 UspA D172_011000 1b2493364b580b68684ff210103013da 295 Gene3D G3DSA:3.40.50.12370 1 295 5.2E-53 T 14-10-2018 D172_017495 8e94020d03a6efd2303cbd25db47e739 180 SUPERFAMILY SSF69118 1 178 1.76E-44 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 D172_017495 8e94020d03a6efd2303cbd25db47e739 180 Gene3D G3DSA:1.20.1290.10 13 180 3.0E-34 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 D172_013770 c13db47794881ed61e09dcdf7723b296 536 Gene3D G3DSA:3.90.700.10 248 358 8.2E-151 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_013770 c13db47794881ed61e09dcdf7723b296 536 SUPERFAMILY SSF46977 425 526 1.96E-32 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_013770 c13db47794881ed61e09dcdf7723b296 536 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 524 1.1E-14 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_013770 c13db47794881ed61e09dcdf7723b296 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 3.1E-7 T 14-10-2018 D172_013770 c13db47794881ed61e09dcdf7723b296 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 3.1E-7 T 14-10-2018 D172_013770 c13db47794881ed61e09dcdf7723b296 536 Pfam PF00890 FAD binding domain 10 392 1.8E-98 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_013770 c13db47794881ed61e09dcdf7723b296 536 SUPERFAMILY SSF51905 7 447 1.1E-66 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_013770 c13db47794881ed61e09dcdf7723b296 536 Gene3D G3DSA:3.50.50.60 10 404 8.2E-151 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_013770 c13db47794881ed61e09dcdf7723b296 536 Gene3D G3DSA:1.20.58.100 425 536 3.8E-45 T 14-10-2018 D172_013770 c13db47794881ed61e09dcdf7723b296 536 SUPERFAMILY SSF56425 238 353 9.12E-41 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_013770 c13db47794881ed61e09dcdf7723b296 536 PIRSF PIRSF000171 1 535 5.2E-35 T 14-10-2018 D172_013770 c13db47794881ed61e09dcdf7723b296 536 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 9 520 1.0E-203 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 D172_019460 3a88b3cb0a4dbba116af07d6776729db 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 D172_019460 3a88b3cb0a4dbba116af07d6776729db 488 SUPERFAMILY SSF53720 3 456 2.62E-124 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D172_019460 3a88b3cb0a4dbba116af07d6776729db 488 Pfam PF00171 Aldehyde dehydrogenase family 17 461 3.4E-122 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D172_019460 3a88b3cb0a4dbba116af07d6776729db 488 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 5 486 2.6E-245 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 D172_019460 3a88b3cb0a4dbba116af07d6776729db 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 D172_019460 3a88b3cb0a4dbba116af07d6776729db 488 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 2 487 57.582 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 D172_019460 3a88b3cb0a4dbba116af07d6776729db 488 Gene3D G3DSA:3.40.605.10 10 450 4.3E-141 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D172_019460 3a88b3cb0a4dbba116af07d6776729db 488 Gene3D G3DSA:3.40.309.10 248 438 4.3E-141 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D172_020775 b0083989480a8472745fc77bace27577 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 227 2.9E-19 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D172_020775 b0083989480a8472745fc77bace27577 245 SUPERFAMILY SSF53850 25 245 1.97E-30 T 14-10-2018 D172_020775 b0083989480a8472745fc77bace27577 245 SMART SM00062 24 245 7.8E-4 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D172_020775 b0083989480a8472745fc77bace27577 245 Gene3D G3DSA:3.40.190.10 110 207 9.2E-25 T 14-10-2018 D172_020775 b0083989480a8472745fc77bace27577 245 Gene3D G3DSA:3.40.190.10 28 243 9.2E-25 T 14-10-2018 D172_007280 8640020def9610f8376b853711b30530 301 SUPERFAMILY SSF46785 7 112 8.16E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_007280 8640020def9610f8376b853711b30530 301 Gene3D G3DSA:3.40.190.290 91 293 9.5E-64 T 14-10-2018 D172_007280 8640020def9610f8376b853711b30530 301 Gene3D G3DSA:1.10.10.10 4 88 1.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_007280 8640020def9610f8376b853711b30530 301 Pfam PF03466 LysR substrate binding domain 90 293 2.3E-41 T 14-10-2018 IPR005119 LysR, substrate-binding D172_007280 8640020def9610f8376b853711b30530 301 SUPERFAMILY SSF53850 91 295 6.88E-43 T 14-10-2018 D172_007280 8640020def9610f8376b853711b30530 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.5E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020350 72bdd8048e32d53fa086db7697ac55a2 137 Gene3D G3DSA:3.30.160.20 1 137 1.1E-38 T 14-10-2018 D172_020350 72bdd8048e32d53fa086db7697ac55a2 137 Pfam PF00472 RF-1 domain 7 132 2.7E-24 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 D172_020350 72bdd8048e32d53fa086db7697ac55a2 137 SUPERFAMILY SSF75620 7 113 1.29E-11 T 14-10-2018 D172_020350 72bdd8048e32d53fa086db7697ac55a2 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 D172_015720 c15e665ba8fc744e66f88f0eb90fbe2e 279 Pfam PF00795 Carbon-nitrogen hydrolase 16 264 1.5E-44 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 D172_015720 c15e665ba8fc744e66f88f0eb90fbe2e 279 Gene3D G3DSA:3.60.110.10 1 277 9.2E-84 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D172_015720 c15e665ba8fc744e66f88f0eb90fbe2e 279 SUPERFAMILY SSF56317 8 271 1.57E-69 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D172_015040 b9fdeb93d471e370a056298e0ffa27bd 405 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 401 4.2E-112 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_015040 b9fdeb93d471e370a056298e0ffa27bd 405 PIRSF PIRSF000726 58 405 3.7E-126 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_015040 b9fdeb93d471e370a056298e0ffa27bd 405 PIRSF PIRSF000726 1 60 2.8E-22 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_015040 b9fdeb93d471e370a056298e0ffa27bd 405 Gene3D G3DSA:3.30.70.260 255 400 1.4E-42 T 14-10-2018 D172_015040 b9fdeb93d471e370a056298e0ffa27bd 405 SUPERFAMILY SSF53633 4 241 8.9E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D172_015040 b9fdeb93d471e370a056298e0ffa27bd 405 Pfam PF13840 ACT domain 338 398 1.4E-13 T 14-10-2018 IPR027795 CASTOR, ACT domain D172_015040 b9fdeb93d471e370a056298e0ffa27bd 405 SUPERFAMILY SSF55021 330 403 8.1E-21 T 14-10-2018 D172_015040 b9fdeb93d471e370a056298e0ffa27bd 405 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 2 401 1.2E-127 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_015040 b9fdeb93d471e370a056298e0ffa27bd 405 SUPERFAMILY SSF55021 250 328 4.04E-12 T 14-10-2018 D172_015040 b9fdeb93d471e370a056298e0ffa27bd 405 Pfam PF00696 Amino acid kinase family 3 229 4.1E-50 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D172_015040 b9fdeb93d471e370a056298e0ffa27bd 405 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 D172_015040 b9fdeb93d471e370a056298e0ffa27bd 405 Gene3D G3DSA:3.30.70.260 260 337 1.4E-42 T 14-10-2018 D172_015040 b9fdeb93d471e370a056298e0ffa27bd 405 Gene3D G3DSA:3.40.1160.10 1 254 5.6E-90 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D172_005765 25a5f777b9d12f6ceb86b189091e1322 182 Gene3D G3DSA:3.90.1340.10 9 59 4.6E-16 T 14-10-2018 IPR037053 Phage tail collar domain superfamily D172_005765 25a5f777b9d12f6ceb86b189091e1322 182 SUPERFAMILY SSF88874 1 176 4.97E-42 T 14-10-2018 D172_005765 25a5f777b9d12f6ceb86b189091e1322 182 Pfam PF07484 Phage Tail Collar Domain 8 63 2.8E-25 T 14-10-2018 IPR011083 Phage tail collar domain D172_005765 25a5f777b9d12f6ceb86b189091e1322 182 Gene3D G3DSA:4.10.1070.10 60 106 4.6E-16 T 14-10-2018 D172_000500 ec054abb059eabb7730bd7f09b2938bd 842 SUPERFAMILY SSF56935 41 842 7.33E-111 T 14-10-2018 D172_000500 ec054abb059eabb7730bd7f09b2938bd 842 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 176 5.5E-21 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_000500 ec054abb059eabb7730bd7f09b2938bd 842 Gene3D G3DSA:2.170.130.10 35 180 2.0E-33 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_000500 ec054abb059eabb7730bd7f09b2938bd 842 Pfam PF00593 TonB dependent receptor 321 841 3.6E-43 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_000500 ec054abb059eabb7730bd7f09b2938bd 842 Gene3D G3DSA:2.40.170.20 272 842 6.4E-57 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_000905 7bc91cec4892880818032666dec83995 689 Gene3D G3DSA:3.40.50.12320 195 347 1.1E-42 T 14-10-2018 D172_000905 7bc91cec4892880818032666dec83995 689 Gene3D G3DSA:3.40.630.30 350 554 3.2E-60 T 14-10-2018 D172_000905 7bc91cec4892880818032666dec83995 689 Pfam PF08351 Domain of unknown function (DUF1726) 66 146 2.1E-11 T 14-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 D172_000905 7bc91cec4892880818032666dec83995 689 Pfam PF05127 Helicase 198 357 2.2E-45 T 14-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 D172_000905 7bc91cec4892880818032666dec83995 689 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 22 689 39.389 T 14-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 D172_000905 7bc91cec4892880818032666dec83995 689 Gene3D G3DSA:3.40.50.11040 7 187 1.3E-39 T 14-10-2018 D172_000905 7bc91cec4892880818032666dec83995 689 Pfam PF13718 GNAT acetyltransferase 2 391 506 2.1E-18 T 14-10-2018 IPR000182 GNAT domain D172_000905 7bc91cec4892880818032666dec83995 689 SUPERFAMILY SSF55729 388 536 5.61E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_000905 7bc91cec4892880818032666dec83995 689 SUPERFAMILY SSF52540 174 301 6.14E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_008310 d51dfe898c291e7795b30cadd979ec57 272 Pfam PF00899 ThiF family 20 161 5.0E-35 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 D172_008310 d51dfe898c291e7795b30cadd979ec57 272 Gene3D G3DSA:3.40.50.720 1 269 2.3E-101 T 14-10-2018 D172_008310 d51dfe898c291e7795b30cadd979ec57 272 SUPERFAMILY SSF69572 9 261 4.71E-61 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 D172_012705 e8754b9d900c3fb9a8b331b6dba9c4bd 114 SUPERFAMILY SSF55248 16 112 3.01E-34 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 D172_012705 e8754b9d900c3fb9a8b331b6dba9c4bd 114 Gene3D G3DSA:3.30.1360.20 18 114 1.1E-31 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 D172_012705 e8754b9d900c3fb9a8b331b6dba9c4bd 114 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 16 111 22.221 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 D172_012705 e8754b9d900c3fb9a8b331b6dba9c4bd 114 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 18 109 8.2E-31 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 D172_006945 b55d8b70c8abc07a71a4191beb0e034f 190 Pfam PF04542 Sigma-70 region 2 16 72 1.0E-6 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D172_006945 b55d8b70c8abc07a71a4191beb0e034f 190 Gene3D G3DSA:1.10.10.10 85 167 1.6E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_006945 b55d8b70c8abc07a71a4191beb0e034f 190 SUPERFAMILY SSF88946 9 86 1.29E-8 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D172_006945 b55d8b70c8abc07a71a4191beb0e034f 190 Gene3D G3DSA:1.10.1740.10 3 84 6.0E-7 T 14-10-2018 D172_006945 b55d8b70c8abc07a71a4191beb0e034f 190 SUPERFAMILY SSF88659 99 157 2.88E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_006945 b55d8b70c8abc07a71a4191beb0e034f 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 156 2.3E-17 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D172_006945 b55d8b70c8abc07a71a4191beb0e034f 190 Pfam PF08281 Sigma-70, region 4 113 156 5.9E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_006040 1814f7fb44ecaacea7c9abd1c6d1c45f 575 Pfam PF07244 Surface antigen variable number repeat 104 185 2.6E-7 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 D172_006040 1814f7fb44ecaacea7c9abd1c6d1c45f 575 Pfam PF17243 POTRA domain TamA domain 1 30 97 2.6E-12 T 14-10-2018 IPR035243 TamA, POTRA domain 1 D172_006040 1814f7fb44ecaacea7c9abd1c6d1c45f 575 Gene3D G3DSA:3.10.20.310 101 187 1.1E-19 T 14-10-2018 D172_006040 1814f7fb44ecaacea7c9abd1c6d1c45f 575 Gene3D G3DSA:2.40.160.50 265 575 1.6E-92 T 14-10-2018 D172_006040 1814f7fb44ecaacea7c9abd1c6d1c45f 575 Gene3D G3DSA:3.10.20.310 188 264 8.0E-16 T 14-10-2018 D172_006040 1814f7fb44ecaacea7c9abd1c6d1c45f 575 Gene3D G3DSA:3.10.20.310 29 99 2.8E-11 T 14-10-2018 D172_006040 1814f7fb44ecaacea7c9abd1c6d1c45f 575 Pfam PF01103 Surface antigen 279 563 1.5E-27 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 D172_017455 93292c3c28294a00ac805a98d3a3a9be 368 Gene3D G3DSA:2.120.10.30 27 368 4.2E-107 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_017455 93292c3c28294a00ac805a98d3a3a9be 368 SUPERFAMILY SSF63829 44 335 1.57E-19 T 14-10-2018 D172_017455 93292c3c28294a00ac805a98d3a3a9be 368 Pfam PF03022 Major royal jelly protein 101 311 4.9E-19 T 14-10-2018 IPR017996 Major royal jelly protein/protein yellow D172_000205 1956af2038b3e522c27aeca9cc4dbbb8 149 PRINTS PR00369 Flavodoxin signature 52 63 1.8E-6 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D172_000205 1956af2038b3e522c27aeca9cc4dbbb8 149 PRINTS PR00369 Flavodoxin signature 5 18 1.8E-6 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D172_000205 1956af2038b3e522c27aeca9cc4dbbb8 149 PRINTS PR00369 Flavodoxin signature 82 92 1.8E-6 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 D172_000205 1956af2038b3e522c27aeca9cc4dbbb8 149 SUPERFAMILY SSF52218 1 146 2.72E-38 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_000205 1956af2038b3e522c27aeca9cc4dbbb8 149 Pfam PF00258 Flavodoxin 7 138 4.3E-22 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 D172_000205 1956af2038b3e522c27aeca9cc4dbbb8 149 Gene3D G3DSA:3.40.50.360 1 146 9.0E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_010725 033dd68c32beec0bc39e70e7c3593a28 186 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 14-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 D172_010725 033dd68c32beec0bc39e70e7c3593a28 186 PIRSF PIRSF000303 1 163 8.3E-57 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D172_010725 033dd68c32beec0bc39e70e7c3593a28 186 Pfam PF00255 Glutathione peroxidase 4 111 1.2E-34 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D172_010725 033dd68c32beec0bc39e70e7c3593a28 186 Gene3D G3DSA:3.40.30.10 1 172 1.5E-59 T 14-10-2018 D172_010725 033dd68c32beec0bc39e70e7c3593a28 186 SUPERFAMILY SSF52833 2 159 4.99E-50 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_010725 033dd68c32beec0bc39e70e7c3593a28 186 PRINTS PR01011 Glutathione peroxidase family signature 22 39 1.7E-15 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D172_010725 033dd68c32beec0bc39e70e7c3593a28 186 PRINTS PR01011 Glutathione peroxidase family signature 57 73 1.7E-15 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D172_010725 033dd68c32beec0bc39e70e7c3593a28 186 PRINTS PR01011 Glutathione peroxidase family signature 123 132 1.7E-15 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D172_020890 b1410e7edaa037904596cce574f67222 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.7E-6 T 14-10-2018 D172_020890 b1410e7edaa037904596cce574f67222 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.7E-6 T 14-10-2018 D172_020890 b1410e7edaa037904596cce574f67222 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.7E-6 T 14-10-2018 D172_020890 b1410e7edaa037904596cce574f67222 434 SUPERFAMILY SSF51905 7 224 6.79E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_020890 b1410e7edaa037904596cce574f67222 434 Gene3D G3DSA:3.50.50.100 1 413 5.0E-113 T 14-10-2018 D172_020890 b1410e7edaa037904596cce574f67222 434 SUPERFAMILY SSF51905 167 351 1.27E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_020890 b1410e7edaa037904596cce574f67222 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 5.9E-11 T 14-10-2018 D172_020890 b1410e7edaa037904596cce574f67222 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.9E-11 T 14-10-2018 D172_020890 b1410e7edaa037904596cce574f67222 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 5.9E-11 T 14-10-2018 D172_020890 b1410e7edaa037904596cce574f67222 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 338 8.8E-62 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D172_005595 224f850125c227b5f50bc42977d1f0ef 119 PRINTS PR00061 Ribosomal protein L19 signature 92 117 2.2E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_005595 224f850125c227b5f50bc42977d1f0ef 119 PRINTS PR00061 Ribosomal protein L19 signature 8 37 2.2E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_005595 224f850125c227b5f50bc42977d1f0ef 119 PRINTS PR00061 Ribosomal protein L19 signature 38 67 2.2E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_005595 224f850125c227b5f50bc42977d1f0ef 119 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 6 118 31.436 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_005595 224f850125c227b5f50bc42977d1f0ef 119 SUPERFAMILY SSF50104 6 118 5.62E-46 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily D172_005595 224f850125c227b5f50bc42977d1f0ef 119 Pfam PF01245 Ribosomal protein L19 7 117 1.0E-49 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_005595 224f850125c227b5f50bc42977d1f0ef 119 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 6 117 2.7E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_005595 224f850125c227b5f50bc42977d1f0ef 119 PIRSF PIRSF002191 1 119 1.3E-50 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_005595 224f850125c227b5f50bc42977d1f0ef 119 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_005595 224f850125c227b5f50bc42977d1f0ef 119 Gene3D G3DSA:2.30.30.790 1 119 8.8E-15 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_005350 df5d58e44db0a7815abcd51d61b53637 497 Pfam PF00854 POT family 87 451 1.5E-59 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 D172_005350 df5d58e44db0a7815abcd51d61b53637 497 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 148 160 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 D172_005350 df5d58e44db0a7815abcd51d61b53637 497 SUPERFAMILY SSF103473 10 485 8.63E-32 T 14-10-2018 IPR036259 MFS transporter superfamily D172_005350 df5d58e44db0a7815abcd51d61b53637 497 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 483 1.8E-120 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 D172_005350 df5d58e44db0a7815abcd51d61b53637 497 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 75 99 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 D172_005350 df5d58e44db0a7815abcd51d61b53637 497 Gene3D G3DSA:1.20.1250.20 1 497 4.5E-130 T 14-10-2018 D172_019570 0af874d8a23253aaba239fac022c030d 783 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 158 2.1E-11 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_019570 0af874d8a23253aaba239fac022c030d 783 SUPERFAMILY SSF56935 36 780 1.08E-109 T 14-10-2018 D172_019570 0af874d8a23253aaba239fac022c030d 783 Pfam PF00593 TonB dependent receptor 264 777 7.1E-30 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_020520 f25c98c912168c95c43dc8651e0c536f 201 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 11 169 4.0E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_020520 f25c98c912168c95c43dc8651e0c536f 201 SUPERFAMILY SSF56784 9 197 1.0E-35 T 14-10-2018 IPR036412 HAD-like superfamily D172_020520 f25c98c912168c95c43dc8651e0c536f 201 Gene3D G3DSA:1.10.260.80 21 72 7.3E-52 T 14-10-2018 D172_020520 f25c98c912168c95c43dc8651e0c536f 201 Gene3D G3DSA:3.40.50.1000 10 186 7.3E-52 T 14-10-2018 IPR023214 HAD superfamily D172_020520 f25c98c912168c95c43dc8651e0c536f 201 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 87 162 1.1E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_020520 f25c98c912168c95c43dc8651e0c536f 201 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 167 1.4E-18 T 14-10-2018 D172_013315 c83433d52c5f2aaf1a48e74b68fe0a7d 316 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 248 268 1.9E-5 T 14-10-2018 D172_013315 c83433d52c5f2aaf1a48e74b68fe0a7d 316 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 228 247 1.9E-5 T 14-10-2018 D172_013315 c83433d52c5f2aaf1a48e74b68fe0a7d 316 Gene3D G3DSA:3.30.1330.60 110 270 4.7E-36 T 14-10-2018 IPR036737 OmpA-like domain superfamily D172_013315 c83433d52c5f2aaf1a48e74b68fe0a7d 316 Pfam PF00691 OmpA family 162 259 8.6E-13 T 14-10-2018 IPR006665 OmpA-like domain D172_013315 c83433d52c5f2aaf1a48e74b68fe0a7d 316 SUPERFAMILY SSF103088 150 265 6.93E-22 T 14-10-2018 IPR036737 OmpA-like domain superfamily D172_013315 c83433d52c5f2aaf1a48e74b68fe0a7d 316 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 10 59 7.7E-17 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain D172_002460 d8fce8d47285ff63109cc5ced6057dd4 51 SUPERFAMILY SSF57829 1 49 3.66E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 D172_002460 d8fce8d47285ff63109cc5ced6057dd4 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_002460 d8fce8d47285ff63109cc5ced6057dd4 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.462 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002460 d8fce8d47285ff63109cc5ced6057dd4 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 4.9E-25 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002460 d8fce8d47285ff63109cc5ced6057dd4 51 Gene3D G3DSA:2.20.28.120 1 51 1.4E-28 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002460 d8fce8d47285ff63109cc5ced6057dd4 51 Pfam PF00471 Ribosomal protein L33 4 49 6.0E-19 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_015465 72ca83f9e0060389779b8fd8cba9a323 553 SMART SM00065 38 211 4.1E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_015465 72ca83f9e0060389779b8fd8cba9a323 553 Pfam PF01590 GAF domain 40 200 3.3E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_015465 72ca83f9e0060389779b8fd8cba9a323 553 SUPERFAMILY SSF109604 210 304 1.54E-8 T 14-10-2018 D172_015465 72ca83f9e0060389779b8fd8cba9a323 553 SUPERFAMILY SSF55781 23 221 3.08E-23 T 14-10-2018 D172_015465 72ca83f9e0060389779b8fd8cba9a323 553 Gene3D G3DSA:1.10.3210.10 399 533 5.4E-29 T 14-10-2018 D172_015465 72ca83f9e0060389779b8fd8cba9a323 553 Gene3D G3DSA:1.10.3210.10 212 397 1.5E-19 T 14-10-2018 D172_015465 72ca83f9e0060389779b8fd8cba9a323 553 SMART SM00471 228 491 0.0049 T 14-10-2018 IPR003607 HD/PDEase domain D172_015465 72ca83f9e0060389779b8fd8cba9a323 553 Gene3D G3DSA:3.30.450.40 14 211 9.6E-32 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_015465 72ca83f9e0060389779b8fd8cba9a323 553 Pfam PF13487 HD domain 408 473 4.2E-19 T 14-10-2018 D172_015465 72ca83f9e0060389779b8fd8cba9a323 553 SUPERFAMILY SSF109604 408 520 2.79E-9 T 14-10-2018 D172_002400 bc2fe0143a5a827f9ae6901bd35be619 310 SUPERFAMILY SSF56327 147 309 7.26E-42 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 D172_002400 bc2fe0143a5a827f9ae6901bd35be619 310 PIRSF PIRSF000102 1 308 4.1E-63 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 D172_002400 bc2fe0143a5a827f9ae6901bd35be619 310 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 310 51.836 T 14-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 D172_002400 bc2fe0143a5a827f9ae6901bd35be619 310 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 308 2.4E-48 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 D172_002400 bc2fe0143a5a827f9ae6901bd35be619 310 Gene3D G3DSA:3.90.110.10 147 310 5.6E-51 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 D172_002400 bc2fe0143a5a827f9ae6901bd35be619 310 SUPERFAMILY SSF51735 1 145 2.17E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_002400 bc2fe0143a5a827f9ae6901bd35be619 310 Gene3D G3DSA:3.40.50.720 1 146 2.3E-61 T 14-10-2018 D172_002400 bc2fe0143a5a827f9ae6901bd35be619 310 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 2.6E-45 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 D172_002400 bc2fe0143a5a827f9ae6901bd35be619 310 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 309 7.6E-126 T 14-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 D172_002400 bc2fe0143a5a827f9ae6901bd35be619 310 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 14-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 D172_001610 9dacdf786d8404550755d823630f36a6 164 Pfam PF00466 Ribosomal protein L10 6 101 3.2E-25 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 D172_001610 9dacdf786d8404550755d823630f36a6 164 Gene3D G3DSA:3.30.70.1730 1 124 4.8E-34 T 14-10-2018 D172_001610 9dacdf786d8404550755d823630f36a6 164 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001610 9dacdf786d8404550755d823630f36a6 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 23.062 T 14-10-2018 IPR022973 Ribosomal protein L10 D172_001610 9dacdf786d8404550755d823630f36a6 164 SUPERFAMILY SSF160369 4 155 2.48E-42 T 14-10-2018 D172_009910 5486fa37c9815c18b293772252800ffd 173 ProSitePatterns PS00018 EF-hand calcium-binding domain. 61 73 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_009910 5486fa37c9815c18b293772252800ffd 173 ProSitePatterns PS00018 EF-hand calcium-binding domain. 138 150 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_009910 5486fa37c9815c18b293772252800ffd 173 SUPERFAMILY SSF47473 17 156 5.82E-17 T 14-10-2018 IPR011992 EF-hand domain pair D172_009910 5486fa37c9815c18b293772252800ffd 173 Pfam PF13202 EF hand 57 74 0.0011 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_009910 5486fa37c9815c18b293772252800ffd 173 Gene3D G3DSA:1.10.238.10 99 162 2.3E-8 T 14-10-2018 D172_009910 5486fa37c9815c18b293772252800ffd 173 Gene3D G3DSA:1.10.238.10 20 83 2.4E-9 T 14-10-2018 D172_003760 d59538436c71e6c737aedbd315f00cb4 247 SUPERFAMILY SSF75217 69 245 7.85E-50 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases D172_003760 d59538436c71e6c737aedbd315f00cb4 247 Gene3D G3DSA:3.30.1330.30 1 77 1.1E-26 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like D172_003760 d59538436c71e6c737aedbd315f00cb4 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 4.0E-84 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 D172_003760 d59538436c71e6c737aedbd315f00cb4 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.017 T 14-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB D172_003760 d59538436c71e6c737aedbd315f00cb4 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 6.6E-41 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 D172_003760 d59538436c71e6c737aedbd315f00cb4 247 SMART SM00967 5 81 1.5E-20 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 D172_003760 d59538436c71e6c737aedbd315f00cb4 247 SUPERFAMILY SSF55315 3 76 4.12E-19 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like D172_003760 d59538436c71e6c737aedbd315f00cb4 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 2.9E-20 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 D172_003760 d59538436c71e6c737aedbd315f00cb4 247 Gene3D G3DSA:3.40.1280.10 79 244 6.7E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D172_005005 0d0d275e3b31d7b64ea23d64d35fb5c9 306 SUPERFAMILY SSF55073 152 256 1.92E-19 T 14-10-2018 IPR029787 Nucleotide cyclase D172_005005 0d0d275e3b31d7b64ea23d64d35fb5c9 306 SMART SM00267 135 302 2.5E-7 T 14-10-2018 IPR000160 GGDEF domain D172_005005 0d0d275e3b31d7b64ea23d64d35fb5c9 306 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 150 264 1.5E-19 T 14-10-2018 IPR000160 GGDEF domain D172_005005 0d0d275e3b31d7b64ea23d64d35fb5c9 306 Pfam PF00990 Diguanylate cyclase, GGDEF domain 151 298 2.3E-21 T 14-10-2018 IPR000160 GGDEF domain D172_005005 0d0d275e3b31d7b64ea23d64d35fb5c9 306 Gene3D G3DSA:3.30.70.270 132 302 4.8E-25 T 14-10-2018 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 Gene3D G3DSA:3.50.50.60 239 565 3.2E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 238 561 1.9E-57 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 Gene3D G3DSA:3.50.50.60 388 513 3.2E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 SUPERFAMILY SSF55424 579 694 7.56E-36 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 Pfam PF09335 SNARE associated Golgi protein 67 183 1.8E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 271 281 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 583 689 1.1E-28 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 SUPERFAMILY SSF51905 240 615 4.09E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 258 5.5E-26 T 14-10-2018 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 369 387 5.5E-26 T 14-10-2018 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 526 548 5.5E-26 T 14-10-2018 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 412 430 5.5E-26 T 14-10-2018 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 499 515 5.5E-26 T 14-10-2018 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 437 4.4E-54 T 14-10-2018 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 666 686 4.4E-54 T 14-10-2018 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 372 381 4.4E-54 T 14-10-2018 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 500 514 4.4E-54 T 14-10-2018 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 260 4.4E-54 T 14-10-2018 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 285 4.4E-54 T 14-10-2018 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 541 548 4.4E-54 T 14-10-2018 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 644 659 4.4E-54 T 14-10-2018 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 579 600 4.4E-54 T 14-10-2018 D172_018215 1b68e46fbd593b6ed7da88dca62d52c4 717 Gene3D G3DSA:3.30.390.30 582 702 5.9E-38 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 D172_017030 8beef7dad340bd674ace76e032ae4063 314 SUPERFAMILY SSF52540 9 250 4.33E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_017030 8beef7dad340bd674ace76e032ae4063 314 PIRSF PIRSF006230 1 277 1.5E-99 T 14-10-2018 IPR016478 GTPase, MTG1 D172_017030 8beef7dad340bd674ace76e032ae4063 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 272 5.2E-105 T 14-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis D172_017030 8beef7dad340bd674ace76e032ae4063 314 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 117 137 3.5E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_017030 8beef7dad340bd674ace76e032ae4063 314 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 163 178 3.5E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_017030 8beef7dad340bd674ace76e032ae4063 314 Gene3D G3DSA:3.40.50.300 3 171 3.8E-44 T 14-10-2018 D172_017030 8beef7dad340bd674ace76e032ae4063 314 Gene3D G3DSA:1.10.1580.10 174 265 3.1E-23 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily D172_017030 8beef7dad340bd674ace76e032ae4063 314 Pfam PF01926 50S ribosome-binding GTPase 117 178 1.5E-14 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 D172_008505 c9ec6539186d30dedcfd6e60ac0dad3f 308 SUPERFAMILY SSF52402 2 183 3.18E-50 T 14-10-2018 D172_008505 c9ec6539186d30dedcfd6e60ac0dad3f 308 Gene3D G3DSA:3.40.50.1220 183 308 8.7E-58 T 14-10-2018 D172_008505 c9ec6539186d30dedcfd6e60ac0dad3f 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 1.2E-35 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 D172_008505 c9ec6539186d30dedcfd6e60ac0dad3f 308 PIRSF PIRSF000089 1 308 8.8E-104 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 D172_008505 c9ec6539186d30dedcfd6e60ac0dad3f 308 SMART SM00893 3 181 7.8E-43 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 D172_008505 c9ec6539186d30dedcfd6e60ac0dad3f 308 Pfam PF01012 Electron transfer flavoprotein domain 3 162 2.6E-33 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 D172_008505 c9ec6539186d30dedcfd6e60ac0dad3f 308 Gene3D G3DSA:3.40.50.620 3 182 1.2E-49 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_008505 c9ec6539186d30dedcfd6e60ac0dad3f 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 D172_008505 c9ec6539186d30dedcfd6e60ac0dad3f 308 SUPERFAMILY SSF52467 188 307 8.41E-48 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily D172_019770 c787a4232cb95898b9b6da442648cb56 196 PIRSF PIRSF000495 1 196 2.4E-62 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 D172_019770 c787a4232cb95898b9b6da442648cb56 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 194 31.249 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 D172_019770 c787a4232cb95898b9b6da442648cb56 196 SUPERFAMILY SSF52317 2 194 2.14E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_019770 c787a4232cb95898b9b6da442648cb56 196 Pfam PF00117 Glutamine amidotransferase class-I 42 191 5.2E-18 T 14-10-2018 IPR017926 Glutamine amidotransferase D172_019770 c787a4232cb95898b9b6da442648cb56 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 193 5.2E-61 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 D172_019770 c787a4232cb95898b9b6da442648cb56 196 Gene3D G3DSA:3.40.50.880 1 196 2.7E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_019380 551290f269a3429aade289d5b4fdc01d 409 SUPERFAMILY SSF53901 1 251 2.33E-57 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_019380 551290f269a3429aade289d5b4fdc01d 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 362 6.8E-28 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal D172_019380 551290f269a3429aade289d5b4fdc01d 409 Gene3D G3DSA:3.40.47.10 5 259 5.3E-60 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_019380 551290f269a3429aade289d5b4fdc01d 409 Gene3D G3DSA:3.40.47.10 260 407 1.8E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_019380 551290f269a3429aade289d5b4fdc01d 409 SMART SM00825 Beta-ketoacyl synthase 4 408 1.9E-12 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D172_019380 551290f269a3429aade289d5b4fdc01d 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site D172_019380 551290f269a3429aade289d5b4fdc01d 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 246 8.0E-43 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D172_019380 551290f269a3429aade289d5b4fdc01d 409 SUPERFAMILY SSF53901 215 406 1.18E-60 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_010070 2f672762d9935b1aa91a059c591cdd77 590 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 21 587 1.0E-204 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 D172_010070 2f672762d9935b1aa91a059c591cdd77 590 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 13 590 38.381 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 D172_010070 2f672762d9935b1aa91a059c591cdd77 590 PIRSF PIRSF000719 12 590 5.9E-180 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 D172_010070 2f672762d9935b1aa91a059c591cdd77 590 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 21 590 0.0 T 14-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 D172_012580 629a644ac4046de6ce69e8fd937d27d4 385 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 7 381 2.4E-139 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 D172_012580 629a644ac4046de6ce69e8fd937d27d4 385 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 7 383 41.653 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 D172_012580 629a644ac4046de6ce69e8fd937d27d4 385 Pfam PF02684 Lipid-A-disaccharide synthetase 10 377 1.3E-127 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 D172_012580 629a644ac4046de6ce69e8fd937d27d4 385 SUPERFAMILY SSF53756 9 382 1.0E-28 T 14-10-2018 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 Gene3D G3DSA:1.10.730.10 386 523 8.7E-34 T 14-10-2018 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 SUPERFAMILY SSF52374 3 384 4.65E-101 T 14-10-2018 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 SUPERFAMILY SSF50249 568 672 1.93E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 538 672 3.7E-46 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 5.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 5.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 PRINTS PR01041 Methionyl-tRNA synthetase signature 381 392 5.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 PRINTS PR01041 Methionyl-tRNA synthetase signature 249 260 5.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 5.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 PRINTS PR01041 Methionyl-tRNA synthetase signature 288 303 5.6E-25 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 532 4.2E-185 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 Hamap MF_00098 Methionine--tRNA ligase [metG]. 4 542 40.426 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 Gene3D G3DSA:3.40.50.620 6 381 9.7E-155 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 SUPERFAMILY SSF47323 387 544 5.61E-44 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 Pfam PF09334 tRNA synthetases class I (M) 6 393 5.5E-159 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 SUPERFAMILY SSF57770 140 174 4.19E-12 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 Pfam PF01588 Putative tRNA binding domain 578 670 1.4E-25 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 Pfam PF08264 Anticodon-binding domain of tRNA 413 499 1.2E-5 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 Gene3D G3DSA:2.40.50.140 562 673 4.3E-36 T 14-10-2018 D172_010045 4f213db7d9f9c143b558f2adf1b2ce43 673 Gene3D G3DSA:2.20.28.20 140 174 9.7E-155 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 D172_020690 4060f34d45e1ff985cdf5335fbac942d 69 SMART SM00357 6 69 9.2E-30 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 D172_020690 4060f34d45e1ff985cdf5335fbac942d 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 3.2E-29 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_020690 4060f34d45e1ff985cdf5335fbac942d 69 PIRSF PIRSF002599 1 69 2.0E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 D172_020690 4060f34d45e1ff985cdf5335fbac942d 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 14-10-2018 IPR019844 Cold-shock conserved site D172_020690 4060f34d45e1ff985cdf5335fbac942d 69 PRINTS PR00050 Cold shock protein signature 42 60 3.3E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_020690 4060f34d45e1ff985cdf5335fbac942d 69 PRINTS PR00050 Cold shock protein signature 7 22 3.3E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_020690 4060f34d45e1ff985cdf5335fbac942d 69 PRINTS PR00050 Cold shock protein signature 27 36 3.3E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_020690 4060f34d45e1ff985cdf5335fbac942d 69 Gene3D G3DSA:2.40.50.140 4 68 2.7E-29 T 14-10-2018 D172_020690 4060f34d45e1ff985cdf5335fbac942d 69 SUPERFAMILY SSF50249 5 68 2.08E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_006885 9b5973c2526e570e34e0031a74937d9f 895 Gene3D G3DSA:2.170.130.10 28 164 1.3E-38 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_006885 9b5973c2526e570e34e0031a74937d9f 895 SUPERFAMILY SSF56935 33 894 3.14E-96 T 14-10-2018 D172_006885 9b5973c2526e570e34e0031a74937d9f 895 Pfam PF00593 TonB dependent receptor 375 894 4.7E-42 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_006885 9b5973c2526e570e34e0031a74937d9f 895 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 160 5.8E-25 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_000190 b11f2afd6aaae297a254835fb6ac94ba 91 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 11 79 24.014 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor D172_000190 b11f2afd6aaae297a254835fb6ac94ba 91 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 26 78 1.0E-23 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor D172_000190 b11f2afd6aaae297a254835fb6ac94ba 91 SMART SM01234 11 78 2.5E-42 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor D172_000190 b11f2afd6aaae297a254835fb6ac94ba 91 Pfam PF01809 Haemolytic domain 14 78 1.5E-28 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor D172_000190 b11f2afd6aaae297a254835fb6ac94ba 91 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 15 84 3.3E-33 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor D172_011925 9ff37a701df3d99c4158afcd09a509ea 279 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 26 274 5.0E-90 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 D172_011925 9ff37a701df3d99c4158afcd09a509ea 279 Gene3D G3DSA:3.40.50.150 90 278 7.8E-57 T 14-10-2018 D172_011925 9ff37a701df3d99c4158afcd09a509ea 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 183 189 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D172_011925 9ff37a701df3d99c4158afcd09a509ea 279 Gene3D G3DSA:1.10.8.10 3 87 8.8E-24 T 14-10-2018 D172_011925 9ff37a701df3d99c4158afcd09a509ea 279 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 278 43.392 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 D172_011925 9ff37a701df3d99c4158afcd09a509ea 279 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 16 278 2.5E-84 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 D172_011925 9ff37a701df3d99c4158afcd09a509ea 279 SUPERFAMILY SSF53335 15 276 1.94E-53 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_011925 9ff37a701df3d99c4158afcd09a509ea 279 Pfam PF13847 Methyltransferase domain 114 243 1.2E-18 T 14-10-2018 IPR025714 Methyltransferase domain D172_010540 cffedeed8d260d2123d5a7ff3ae85483 95 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 7 87 1.0E-10 T 14-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 D172_010540 cffedeed8d260d2123d5a7ff3ae85483 95 Pfam PF10963 Phage tail assembly chaperone 7 88 4.9E-24 T 14-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 D172_019505 cd3f51392b9d98ccb36ba63eb7350138 845 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 22 823 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 D172_019505 cd3f51392b9d98ccb36ba63eb7350138 845 PIRSF PIRSF000460 11 844 3.6E-224 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 D172_019505 cd3f51392b9d98ccb36ba63eb7350138 845 Gene3D G3DSA:3.40.50.2000 35 825 0.0 T 14-10-2018 D172_019505 cd3f51392b9d98ccb36ba63eb7350138 845 SUPERFAMILY SSF53756 21 828 0.0 T 14-10-2018 D172_019505 cd3f51392b9d98ccb36ba63eb7350138 845 Gene3D G3DSA:3.40.50.2000 482 808 0.0 T 14-10-2018 D172_019505 cd3f51392b9d98ccb36ba63eb7350138 845 Pfam PF00343 Carbohydrate phosphorylase 111 823 0.0 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 D172_019505 cd3f51392b9d98ccb36ba63eb7350138 845 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 668 680 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 D172_007995 36b6312a08af0205bc4184f83d43adca 763 Pfam PF01136 Peptidase family U32 540 674 1.0E-5 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 D172_007995 36b6312a08af0205bc4184f83d43adca 763 Pfam PF01136 Peptidase family U32 79 292 2.4E-65 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 D172_007995 36b6312a08af0205bc4184f83d43adca 763 Pfam PF12392 Collagenase 376 453 3.5E-5 T 14-10-2018 IPR020988 Peptidase U32, collagenase D172_004805 d8040b658507b91db31e0a95ecc81cc7 407 Gene3D G3DSA:3.40.50.2300 123 250 4.0E-29 T 14-10-2018 D172_004805 d8040b658507b91db31e0a95ecc81cc7 407 SUPERFAMILY SSF55073 259 407 4.0E-40 T 14-10-2018 IPR029787 Nucleotide cyclase D172_004805 d8040b658507b91db31e0a95ecc81cc7 407 Gene3D G3DSA:3.30.70.270 251 407 1.1E-47 T 14-10-2018 D172_004805 d8040b658507b91db31e0a95ecc81cc7 407 SMART SM00448 2 117 2.3E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004805 d8040b658507b91db31e0a95ecc81cc7 407 SMART SM00448 123 237 2.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004805 d8040b658507b91db31e0a95ecc81cc7 407 Gene3D G3DSA:3.40.50.2300 1 121 1.6E-17 T 14-10-2018 D172_004805 d8040b658507b91db31e0a95ecc81cc7 407 SUPERFAMILY SSF52172 122 254 4.41E-30 T 14-10-2018 IPR011006 CheY-like superfamily D172_004805 d8040b658507b91db31e0a95ecc81cc7 407 SMART SM00267 243 407 1.8E-41 T 14-10-2018 IPR000160 GGDEF domain D172_004805 d8040b658507b91db31e0a95ecc81cc7 407 SUPERFAMILY SSF52172 1 102 2.42E-16 T 14-10-2018 IPR011006 CheY-like superfamily D172_004805 d8040b658507b91db31e0a95ecc81cc7 407 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 252 406 1.8E-37 T 14-10-2018 IPR000160 GGDEF domain D172_004805 d8040b658507b91db31e0a95ecc81cc7 407 Pfam PF00072 Response regulator receiver domain 4 104 1.5E-10 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004805 d8040b658507b91db31e0a95ecc81cc7 407 Pfam PF00072 Response regulator receiver domain 126 235 7.4E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004805 d8040b658507b91db31e0a95ecc81cc7 407 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 404 2.1E-38 T 14-10-2018 IPR000160 GGDEF domain D172_008825 4645d6aec51d07e539b3924b4a199bbd 440 Pfam PF13726 Na+-H+ antiporter family 2 88 3.5E-31 T 14-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal D172_008825 4645d6aec51d07e539b3924b4a199bbd 440 Pfam PF03553 Na+/H+ antiporter family 150 434 3.1E-63 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 D172_007595 4997f37c86f11f71237fed446e761eaf 222 Gene3D G3DSA:3.40.50.1820 35 220 8.1E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_007595 4997f37c86f11f71237fed446e761eaf 222 SUPERFAMILY SSF53474 28 150 1.73E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_003545 7382e5e0eaa6d696ddc56baf48f248e9 197 SUPERFAMILY SSF53697 1 190 5.26E-36 T 14-10-2018 D172_003545 7382e5e0eaa6d696ddc56baf48f248e9 197 Gene3D G3DSA:3.40.50.10490 1 195 1.5E-44 T 14-10-2018 D172_003545 7382e5e0eaa6d696ddc56baf48f248e9 197 Pfam PF13580 SIS domain 21 143 1.6E-21 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D172_016190 03ebe40ab61e918135ff92153b0cbb0a 328 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 2.0E-22 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_016190 03ebe40ab61e918135ff92153b0cbb0a 328 Gene3D G3DSA:2.170.120.12 53 177 1.3E-82 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_016190 03ebe40ab61e918135ff92153b0cbb0a 328 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 328 1.0E-35 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_016190 03ebe40ab61e918135ff92153b0cbb0a 328 Gene3D G3DSA:3.30.1360.10 19 228 1.3E-82 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_016190 03ebe40ab61e918135ff92153b0cbb0a 328 SUPERFAMILY SSF47789 251 324 2.88E-25 T 14-10-2018 D172_016190 03ebe40ab61e918135ff92153b0cbb0a 328 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 2.3E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_016190 03ebe40ab61e918135ff92153b0cbb0a 328 SUPERFAMILY SSF56553 53 178 2.09E-40 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_016190 03ebe40ab61e918135ff92153b0cbb0a 328 Gene3D G3DSA:1.10.150.20 244 328 2.8E-38 T 14-10-2018 D172_016190 03ebe40ab61e918135ff92153b0cbb0a 328 SMART SM00662 23 234 1.1E-104 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_016190 03ebe40ab61e918135ff92153b0cbb0a 328 SUPERFAMILY SSF55257 6 231 2.06E-30 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_016190 03ebe40ab61e918135ff92153b0cbb0a 328 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.385 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_016190 03ebe40ab61e918135ff92153b0cbb0a 328 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 3.6E-24 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_016190 03ebe40ab61e918135ff92153b0cbb0a 328 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 2.4E-109 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_005990 92959dcc87ef402902756cc8cfad01cc 202 Gene3D G3DSA:1.20.1270.340 1 94 6.4E-7 T 14-10-2018 IPR038338 PriB/PriC superfamily D172_005990 92959dcc87ef402902756cc8cfad01cc 202 Pfam PF07445 Primosomal replication protein priC 8 197 7.6E-45 T 14-10-2018 IPR010890 Primosomal replication PriB/PriC D172_013235 7f59f5247126a97b1e067f76236e7c01 243 PRINTS PR01805 VacJ lipoprotein signature 47 63 4.9E-25 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 D172_013235 7f59f5247126a97b1e067f76236e7c01 243 PRINTS PR01805 VacJ lipoprotein signature 134 151 4.9E-25 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 D172_013235 7f59f5247126a97b1e067f76236e7c01 243 PRINTS PR01805 VacJ lipoprotein signature 29 42 4.9E-25 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 D172_013235 7f59f5247126a97b1e067f76236e7c01 243 PRINTS PR01805 VacJ lipoprotein signature 98 115 4.9E-25 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 D172_013235 7f59f5247126a97b1e067f76236e7c01 243 Pfam PF04333 MlaA lipoprotein 28 217 2.4E-67 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 D172_010065 5dc39326c731590cfe86e082204d49d5 320 Gene3D G3DSA:3.90.180.10 10 317 6.0E-93 T 14-10-2018 D172_010065 5dc39326c731590cfe86e082204d49d5 320 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 2 318 1.2E-123 T 14-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 D172_010065 5dc39326c731590cfe86e082204d49d5 320 SUPERFAMILY SSF51735 108 277 3.49E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_010065 5dc39326c731590cfe86e082204d49d5 320 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 83 8.2E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D172_010065 5dc39326c731590cfe86e082204d49d5 320 SMART SM00829 9 317 2.9E-22 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D172_010065 5dc39326c731590cfe86e082204d49d5 320 Pfam PF00107 Zinc-binding dehydrogenase 147 264 3.8E-21 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D172_010065 5dc39326c731590cfe86e082204d49d5 320 SUPERFAMILY SSF50129 6 137 1.52E-31 T 14-10-2018 IPR011032 GroES-like superfamily D172_010065 5dc39326c731590cfe86e082204d49d5 320 Gene3D G3DSA:3.40.50.720 116 256 6.0E-93 T 14-10-2018 D172_020215 af1a8904218e6bb9226f8628b86c4fc8 1048 Pfam PF00271 Helicase conserved C-terminal domain 895 992 5.6E-17 T 14-10-2018 IPR001650 Helicase, C-terminal D172_020215 af1a8904218e6bb9226f8628b86c4fc8 1048 SMART SM00487 586 773 1.1E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_020215 af1a8904218e6bb9226f8628b86c4fc8 1048 SUPERFAMILY SSF52540 589 800 3.95E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_020215 af1a8904218e6bb9226f8628b86c4fc8 1048 Gene3D G3DSA:3.40.50.300 807 1006 1.9E-76 T 14-10-2018 D172_020215 af1a8904218e6bb9226f8628b86c4fc8 1048 Pfam PF00176 SNF2 family N-terminal domain 602 873 1.1E-63 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 D172_020215 af1a8904218e6bb9226f8628b86c4fc8 1048 SUPERFAMILY SSF52540 801 1047 9.02E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_020215 af1a8904218e6bb9226f8628b86c4fc8 1048 SMART SM00490 912 992 5.4E-23 T 14-10-2018 IPR001650 Helicase, C-terminal D172_020215 af1a8904218e6bb9226f8628b86c4fc8 1048 Gene3D G3DSA:3.40.50.10810 591 801 1.3E-67 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily D172_020215 af1a8904218e6bb9226f8628b86c4fc8 1048 Gene3D G3DSA:1.20.120.850 822 1041 1.9E-76 T 14-10-2018 D172_003815 355fa14df5b836ec50b7c0076cbb665f 297 PIRSF PIRSF034934 3 295 3.0E-58 T 14-10-2018 IPR017034 Abortive infection system protein AbiD/AbiF D172_003815 355fa14df5b836ec50b7c0076cbb665f 297 Pfam PF07751 Abi-like protein 33 215 4.5E-48 T 14-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like D172_007820 d3db7c49d993e947beb807bac83b70ff 67 PIRSF PIRSF037225 1 65 6.4E-26 T 14-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 D172_007820 d3db7c49d993e947beb807bac83b70ff 67 Pfam PF14255 Cysteine-rich CPXCG 9 60 8.1E-24 T 14-10-2018 IPR025990 Cysteine-rich CPXCG protein D172_017925 46e0b90c51f6c85fd204ca8d8362324d 409 Pfam PF00266 Aminotransferase class-V 17 357 8.8E-25 T 14-10-2018 IPR000192 Aminotransferase class V domain D172_017925 46e0b90c51f6c85fd204ca8d8362324d 409 Gene3D G3DSA:3.90.1150.10 15 384 1.1E-132 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_017925 46e0b90c51f6c85fd204ca8d8362324d 409 PIRSF PIRSF000524 8 409 1.9E-104 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 D172_017925 46e0b90c51f6c85fd204ca8d8362324d 409 Gene3D G3DSA:3.40.640.10 26 287 1.1E-132 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_017925 46e0b90c51f6c85fd204ca8d8362324d 409 SUPERFAMILY SSF53383 6 391 1.1E-85 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_002030 b5b7a528c721dd689bc6c3bdda9f4e0f 267 Gene3D G3DSA:3.30.540.10 1 140 2.9E-51 T 14-10-2018 D172_002030 b5b7a528c721dd689bc6c3bdda9f4e0f 267 SUPERFAMILY SSF56655 1 261 8.38E-85 T 14-10-2018 D172_002030 b5b7a528c721dd689bc6c3bdda9f4e0f 267 Gene3D G3DSA:3.40.190.80 141 267 1.7E-35 T 14-10-2018 D172_002030 b5b7a528c721dd689bc6c3bdda9f4e0f 267 Pfam PF00459 Inositol monophosphatase family 2 258 1.4E-69 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D172_002030 b5b7a528c721dd689bc6c3bdda9f4e0f 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.5E-31 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 D172_002030 b5b7a528c721dd689bc6c3bdda9f4e0f 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.5E-31 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 D172_002030 b5b7a528c721dd689bc6c3bdda9f4e0f 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.5E-31 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 D172_002030 b5b7a528c721dd689bc6c3bdda9f4e0f 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.5E-31 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 D172_002030 b5b7a528c721dd689bc6c3bdda9f4e0f 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 5.8E-54 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D172_002030 b5b7a528c721dd689bc6c3bdda9f4e0f 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 5.8E-54 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D172_002030 b5b7a528c721dd689bc6c3bdda9f4e0f 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 5.8E-54 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D172_002030 b5b7a528c721dd689bc6c3bdda9f4e0f 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 5.8E-54 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D172_002030 b5b7a528c721dd689bc6c3bdda9f4e0f 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 5.8E-54 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D172_002030 b5b7a528c721dd689bc6c3bdda9f4e0f 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 5.8E-54 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D172_002030 b5b7a528c721dd689bc6c3bdda9f4e0f 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site D172_009385 25fb6e5fecf5b68d65c3a2040a27dcd4 517 Gene3D G3DSA:3.50.50.60 2 513 1.8E-181 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_009385 25fb6e5fecf5b68d65c3a2040a27dcd4 517 PIRSF PIRSF011396 1 514 1.7E-170 T 14-10-2018 IPR033856 Flavin-dependent tryptophan halogenase D172_009385 25fb6e5fecf5b68d65c3a2040a27dcd4 517 SUPERFAMILY SSF51905 4 414 1.07E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_009385 25fb6e5fecf5b68d65c3a2040a27dcd4 517 Pfam PF04820 Tryptophan halogenase 8 467 1.1E-119 T 14-10-2018 IPR006905 Flavin-dependent halogenase D172_016345 9ea37b5aabb91e9c3a6e8a869ae733f9 251 Gene3D G3DSA:2.40.160.20 28 251 1.1E-6 T 14-10-2018 D172_016345 9ea37b5aabb91e9c3a6e8a869ae733f9 251 Pfam PF06629 MltA-interacting protein MipA 33 251 2.0E-46 T 14-10-2018 IPR010583 MltA-interacting MipA D172_015360 fd88178f6d66618ca2d27b367554e8c4 346 Gene3D G3DSA:3.40.50.2000 166 331 9.6E-41 T 14-10-2018 D172_015360 fd88178f6d66618ca2d27b367554e8c4 346 Pfam PF13439 Glycosyltransferase Family 4 15 168 2.2E-9 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D172_015360 fd88178f6d66618ca2d27b367554e8c4 346 Pfam PF00534 Glycosyl transferases group 1 175 298 1.1E-23 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 D172_015360 fd88178f6d66618ca2d27b367554e8c4 346 SUPERFAMILY SSF53756 4 345 2.76E-56 T 14-10-2018 D172_015360 fd88178f6d66618ca2d27b367554e8c4 346 Gene3D G3DSA:3.40.50.2000 15 340 9.6E-41 T 14-10-2018 D172_000085 b87ab68446a2077918ebcab56e9e34e9 71 ProSitePatterns PS00018 EF-hand calcium-binding domain. 55 67 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_000085 b87ab68446a2077918ebcab56e9e34e9 71 SUPERFAMILY SSF47473 16 70 4.47E-11 T 14-10-2018 IPR011992 EF-hand domain pair D172_000085 b87ab68446a2077918ebcab56e9e34e9 71 Pfam PF13202 EF hand 24 40 0.0026 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_000085 b87ab68446a2077918ebcab56e9e34e9 71 Pfam PF13202 EF hand 47 70 4.4E-6 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_000085 b87ab68446a2077918ebcab56e9e34e9 71 Gene3D G3DSA:1.10.238.10 14 71 1.2E-10 T 14-10-2018 D172_013225 d4a2ee30cf18c3c245576746162e5d62 506 Pfam PF00474 Sodium:solute symporter family 30 444 1.3E-97 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D172_013225 d4a2ee30cf18c3c245576746162e5d62 506 Gene3D G3DSA:1.20.1730.10 17 504 2.6E-89 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily D172_013225 d4a2ee30cf18c3c245576746162e5d62 506 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 30 444 9.2E-90 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D172_013225 d4a2ee30cf18c3c245576746162e5d62 506 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 1 505 1.2E-203 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 D172_013225 d4a2ee30cf18c3c245576746162e5d62 506 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 426 446 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site D172_014030 8014bacce50b5344088d6c340010d094 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 1.0E-30 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 D172_014030 8014bacce50b5344088d6c340010d094 119 SUPERFAMILY SSF55620 1 115 1.83E-32 T 14-10-2018 D172_014030 8014bacce50b5344088d6c340010d094 119 SMART SM00905 4 114 7.8E-43 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 D172_014030 8014bacce50b5344088d6c340010d094 119 Gene3D G3DSA:3.30.1130.10 1 116 4.7E-39 T 14-10-2018 D172_014030 8014bacce50b5344088d6c340010d094 119 Pfam PF02152 Dihydroneopterin aldolase 4 113 2.8E-30 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 D172_014030 8014bacce50b5344088d6c340010d094 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 2.6E-23 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 D172_005065 174635eae57e571fa706047a1632444c 165 Pfam PF01799 [2Fe-2S] binding domain 72 144 6.6E-28 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 D172_005065 174635eae57e571fa706047a1632444c 165 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 51 2.8E-6 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 D172_005065 174635eae57e571fa706047a1632444c 165 Gene3D G3DSA:1.10.150.120 76 157 1.5E-26 T 14-10-2018 D172_005065 174635eae57e571fa706047a1632444c 165 SUPERFAMILY SSF54292 2 77 3.15E-25 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D172_005065 174635eae57e571fa706047a1632444c 165 Gene3D G3DSA:3.10.20.30 1 75 9.3E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily D172_005065 174635eae57e571fa706047a1632444c 165 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 D172_005065 174635eae57e571fa706047a1632444c 165 SUPERFAMILY SSF47741 72 152 6.15E-31 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily D172_015555 59e08ecb4a03c245a0ca477de1a1189a 393 SMART SM00448 3 115 6.1E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_015555 59e08ecb4a03c245a0ca477de1a1189a 393 Gene3D G3DSA:3.40.50.12740 1 165 6.9E-39 T 14-10-2018 D172_015555 59e08ecb4a03c245a0ca477de1a1189a 393 SUPERFAMILY SSF52172 3 126 8.68E-35 T 14-10-2018 IPR011006 CheY-like superfamily D172_015555 59e08ecb4a03c245a0ca477de1a1189a 393 Pfam PF00072 Response regulator receiver domain 5 116 7.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_016705 0416e40afdcd9872520129678e058f30 517 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 201 214 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D172_016705 0416e40afdcd9872520129678e058f30 517 Gene3D G3DSA:1.10.238.260 282 395 1.3E-32 T 14-10-2018 D172_016705 0416e40afdcd9872520129678e058f30 517 Gene3D G3DSA:3.30.160.270 396 503 1.7E-12 T 14-10-2018 D172_016705 0416e40afdcd9872520129678e058f30 517 SUPERFAMILY SSF110921 394 501 5.23E-22 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D172_016705 0416e40afdcd9872520129678e058f30 517 SUPERFAMILY SSF51569 4 293 4.94E-96 T 14-10-2018 D172_016705 0416e40afdcd9872520129678e058f30 517 Pfam PF00682 HMGL-like 7 275 5.4E-94 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 D172_016705 0416e40afdcd9872520129678e058f30 517 Gene3D G3DSA:3.20.20.70 2 279 5.9E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_016705 0416e40afdcd9872520129678e058f30 517 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 4 511 40.58 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D172_016705 0416e40afdcd9872520129678e058f30 517 Pfam PF08502 LeuA allosteric (dimerisation) domain 372 501 5.7E-26 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D172_016705 0416e40afdcd9872520129678e058f30 517 SMART SM00917 371 502 4.3E-30 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D172_016705 0416e40afdcd9872520129678e058f30 517 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 14 30 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D172_016705 0416e40afdcd9872520129678e058f30 517 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 6 499 3.5E-225 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 D172_015460 b231a97abc12baaec0d818909c5f4de3 666 SUPERFAMILY SSF55073 403 588 1.18E-51 T 14-10-2018 IPR029787 Nucleotide cyclase D172_015460 b231a97abc12baaec0d818909c5f4de3 666 SMART SM00044 372 569 1.8E-6 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 D172_015460 b231a97abc12baaec0d818909c5f4de3 666 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 403 583 9.0E-31 T 14-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 D172_015460 b231a97abc12baaec0d818909c5f4de3 666 Gene3D G3DSA:3.30.70.1230 397 602 3.2E-57 T 14-10-2018 IPR029787 Nucleotide cyclase D172_015460 b231a97abc12baaec0d818909c5f4de3 666 Pfam PF05226 CHASE2 domain 4 306 3.8E-49 T 14-10-2018 IPR007890 CHASE2 D172_015460 b231a97abc12baaec0d818909c5f4de3 666 SMART SM01080 1 308 4.1E-44 T 14-10-2018 IPR007890 CHASE2 D172_006665 3ec3ba83de871af731b6e0db3860995e 452 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 5 447 48.777 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 D172_006665 3ec3ba83de871af731b6e0db3860995e 452 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 17 448 7.4E-154 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 D172_006665 3ec3ba83de871af731b6e0db3860995e 452 Gene3D G3DSA:2.120.10.30 184 452 2.6E-91 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_006665 3ec3ba83de871af731b6e0db3860995e 452 Pfam PF04052 TolB amino-terminal domain 24 126 1.3E-33 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 D172_006665 3ec3ba83de871af731b6e0db3860995e 452 Gene3D G3DSA:3.40.50.10070 23 182 1.6E-46 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 D172_006665 3ec3ba83de871af731b6e0db3860995e 452 SUPERFAMILY SSF52964 29 180 1.09E-37 T 14-10-2018 D172_006665 3ec3ba83de871af731b6e0db3860995e 452 Pfam PF07676 WD40-like Beta Propeller Repeat 222 247 1.3E-6 T 14-10-2018 IPR011659 WD40-like Beta Propeller D172_006665 3ec3ba83de871af731b6e0db3860995e 452 Pfam PF07676 WD40-like Beta Propeller Repeat 262 277 0.042 T 14-10-2018 IPR011659 WD40-like Beta Propeller D172_006665 3ec3ba83de871af731b6e0db3860995e 452 Pfam PF07676 WD40-like Beta Propeller Repeat 392 413 0.28 T 14-10-2018 IPR011659 WD40-like Beta Propeller D172_006665 3ec3ba83de871af731b6e0db3860995e 452 Pfam PF07676 WD40-like Beta Propeller Repeat 302 336 5.2E-9 T 14-10-2018 IPR011659 WD40-like Beta Propeller D172_006665 3ec3ba83de871af731b6e0db3860995e 452 SUPERFAMILY SSF69304 174 449 1.26E-53 T 14-10-2018 D172_002980 a926a8cfc673ed9df73d55d7ce9ea24d 242 Gene3D G3DSA:3.40.30.10 84 239 4.2E-49 T 14-10-2018 D172_002980 a926a8cfc673ed9df73d55d7ce9ea24d 242 Gene3D G3DSA:3.10.450.70 23 83 1.9E-20 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 D172_002980 a926a8cfc673ed9df73d55d7ce9ea24d 242 SUPERFAMILY SSF54423 32 86 3.53E-14 T 14-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 D172_002980 a926a8cfc673ed9df73d55d7ce9ea24d 242 Pfam PF10411 Disulfide bond isomerase protein N-terminus 38 84 2.3E-15 T 14-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal D172_002980 a926a8cfc673ed9df73d55d7ce9ea24d 242 Pfam PF13098 Thioredoxin-like domain 112 236 1.1E-27 T 14-10-2018 IPR012336 Thioredoxin-like fold D172_002980 a926a8cfc673ed9df73d55d7ce9ea24d 242 SUPERFAMILY SSF52833 103 237 4.55E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_000260 7db54268b75deacc1c795018bbec001d 286 Gene3D G3DSA:3.40.1380.10 61 205 9.6E-108 T 14-10-2018 D172_000260 7db54268b75deacc1c795018bbec001d 286 SUPERFAMILY SSF52943 2 286 1.28E-91 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000260 7db54268b75deacc1c795018bbec001d 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 7.1E-38 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000260 7db54268b75deacc1c795018bbec001d 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 7.1E-38 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000260 7db54268b75deacc1c795018bbec001d 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 7.1E-38 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000260 7db54268b75deacc1c795018bbec001d 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 7.1E-38 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000260 7db54268b75deacc1c795018bbec001d 286 Pfam PF00231 ATP synthase 5 285 1.2E-92 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000260 7db54268b75deacc1c795018bbec001d 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 9.2E-106 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000260 7db54268b75deacc1c795018bbec001d 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 35.951 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000260 7db54268b75deacc1c795018bbec001d 286 Gene3D G3DSA:1.10.287.80 6 282 9.6E-108 T 14-10-2018 D172_004640 deef8341ebc2b2358d1363201046ab26 274 Pfam PF01551 Peptidase family M23 176 269 1.3E-26 T 14-10-2018 IPR016047 Peptidase M23 D172_004640 deef8341ebc2b2358d1363201046ab26 274 SMART SM00257 49 93 1.6E-9 T 14-10-2018 IPR018392 LysM domain D172_004640 deef8341ebc2b2358d1363201046ab26 274 Gene3D G3DSA:2.70.70.10 137 273 1.2E-33 T 14-10-2018 IPR011055 Duplicated hybrid motif D172_004640 deef8341ebc2b2358d1363201046ab26 274 SUPERFAMILY SSF51261 50 273 1.99E-43 T 14-10-2018 IPR011055 Duplicated hybrid motif D172_004640 deef8341ebc2b2358d1363201046ab26 274 Pfam PF01476 LysM domain 50 92 4.3E-11 T 14-10-2018 IPR018392 LysM domain D172_004640 deef8341ebc2b2358d1363201046ab26 274 Gene3D G3DSA:3.10.350.10 48 91 1.1E-11 T 14-10-2018 IPR036779 LysM domain superfamily D172_006255 86d1596be8c39025f6deea85cfebab34 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.241 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 D172_006255 86d1596be8c39025f6deea85cfebab34 592 SUPERFAMILY SSF55681 108 584 1.38E-101 T 14-10-2018 D172_006255 86d1596be8c39025f6deea85cfebab34 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.1E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_006255 86d1596be8c39025f6deea85cfebab34 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.1E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_006255 86d1596be8c39025f6deea85cfebab34 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.1E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_006255 86d1596be8c39025f6deea85cfebab34 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.1E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_006255 86d1596be8c39025f6deea85cfebab34 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 3.6E-15 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 D172_006255 86d1596be8c39025f6deea85cfebab34 592 Gene3D G3DSA:3.30.930.10 118 577 9.2E-197 T 14-10-2018 D172_006255 86d1596be8c39025f6deea85cfebab34 592 SUPERFAMILY SSF55261 288 419 1.14E-45 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 D172_006255 86d1596be8c39025f6deea85cfebab34 592 Gene3D G3DSA:3.30.1360.30 271 420 9.2E-197 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 D172_006255 86d1596be8c39025f6deea85cfebab34 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 585 2.0E-260 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 D172_006255 86d1596be8c39025f6deea85cfebab34 592 Pfam PF02938 GAD domain 307 406 2.8E-31 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 D172_006255 86d1596be8c39025f6deea85cfebab34 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 7.3E-106 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_006255 86d1596be8c39025f6deea85cfebab34 592 SUPERFAMILY SSF50249 1 105 2.29E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_006255 86d1596be8c39025f6deea85cfebab34 592 Gene3D G3DSA:2.40.50.140 1 105 1.0E-33 T 14-10-2018 D172_018150 c0400b4031a6ad92ed1983547a7ca440 269 Pfam PF00106 short chain dehydrogenase 10 203 3.8E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018150 c0400b4031a6ad92ed1983547a7ca440 269 Gene3D G3DSA:3.40.50.720 1 264 3.7E-59 T 14-10-2018 D172_018150 c0400b4031a6ad92ed1983547a7ca440 269 PIRSF PIRSF000126 1 266 2.6E-73 T 14-10-2018 D172_018150 c0400b4031a6ad92ed1983547a7ca440 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018150 c0400b4031a6ad92ed1983547a7ca440 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018150 c0400b4031a6ad92ed1983547a7ca440 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 2.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018150 c0400b4031a6ad92ed1983547a7ca440 269 SUPERFAMILY SSF51735 4 254 9.72E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_018150 c0400b4031a6ad92ed1983547a7ca440 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 6.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018150 c0400b4031a6ad92ed1983547a7ca440 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 6.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018150 c0400b4031a6ad92ed1983547a7ca440 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 6.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018150 c0400b4031a6ad92ed1983547a7ca440 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 6.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018150 c0400b4031a6ad92ed1983547a7ca440 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 6.3E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_011125 1e7be8685ed375698af69a60bd6591c5 350 Hamap MF_00219 Dihydroorotase [pyrC]. 10 350 46.498 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_011125 1e7be8685ed375698af69a60bd6591c5 350 SUPERFAMILY SSF51556 10 349 2.34E-144 T 14-10-2018 IPR032466 Metal-dependent hydrolase D172_011125 1e7be8685ed375698af69a60bd6591c5 350 ProSitePatterns PS00483 Dihydroorotase signature 2. 252 263 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_011125 1e7be8685ed375698af69a60bd6591c5 350 ProSitePatterns PS00482 Dihydroorotase signature 1. 19 27 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_011125 1e7be8685ed375698af69a60bd6591c5 350 Pfam PF01979 Amidohydrolase family 19 307 3.9E-12 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 D172_011125 1e7be8685ed375698af69a60bd6591c5 350 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 12 349 2.3E-138 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_011125 1e7be8685ed375698af69a60bd6591c5 350 Gene3D G3DSA:3.20.20.140 10 350 4.6E-107 T 14-10-2018 D172_011125 1e7be8685ed375698af69a60bd6591c5 350 PIRSF PIRSF001237 8 350 1.4E-141 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 D172_009545 c884eaf1ac93e5b0f4e647e0a49f1d29 274 Gene3D G3DSA:2.40.50.40 167 236 9.0E-14 T 14-10-2018 D172_009545 c884eaf1ac93e5b0f4e647e0a49f1d29 274 SMART SM00448 4 116 1.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_009545 c884eaf1ac93e5b0f4e647e0a49f1d29 274 Pfam PF00072 Response regulator receiver domain 7 117 1.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_009545 c884eaf1ac93e5b0f4e647e0a49f1d29 274 SMART SM00850 175 273 8.8E-36 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 D172_009545 c884eaf1ac93e5b0f4e647e0a49f1d29 274 Pfam PF04397 LytTr DNA-binding domain 176 272 6.8E-24 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 D172_009545 c884eaf1ac93e5b0f4e647e0a49f1d29 274 SUPERFAMILY SSF52172 4 132 1.85E-32 T 14-10-2018 IPR011006 CheY-like superfamily D172_009545 c884eaf1ac93e5b0f4e647e0a49f1d29 274 Gene3D G3DSA:3.40.50.2300 2 137 2.8E-34 T 14-10-2018 D172_016520 70f5290660ac0be1de2735d0d41394b0 343 Gene3D G3DSA:3.20.20.370 17 239 3.6E-60 T 14-10-2018 D172_016520 70f5290660ac0be1de2735d0d41394b0 343 SUPERFAMILY SSF88713 38 214 5.56E-39 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 D172_016520 70f5290660ac0be1de2735d0d41394b0 343 Pfam PF01522 Polysaccharide deacetylase 74 207 3.1E-29 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 D172_007675 2250a4af71a8e4aa8c22a62a6c3b3eba 376 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 119 322 2.1E-10 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region D172_007675 2250a4af71a8e4aa8c22a62a6c3b3eba 376 Gene3D G3DSA:2.120.10.30 31 349 1.9E-20 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_007675 2250a4af71a8e4aa8c22a62a6c3b3eba 376 SUPERFAMILY SSF63829 65 348 1.21E-29 T 14-10-2018 D172_014945 65246600b2a68b894358490d39490327 391 Pfam PF01098 Cell cycle protein 25 378 4.6E-112 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_014945 65246600b2a68b894358490d39490327 391 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 23 376 2.2E-130 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_014945 65246600b2a68b894358490d39490327 391 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 19 386 40.541 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_014945 65246600b2a68b894358490d39490327 391 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 335 359 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_014345 bcf9d755868dfdf38d50f20b36d84fb4 217 PIRSF PIRSF000498 1 210 1.2E-76 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_014345 bcf9d755868dfdf38d50f20b36d84fb4 217 SUPERFAMILY SSF63380 1 90 9.35E-22 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D172_014345 bcf9d755868dfdf38d50f20b36d84fb4 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 1.8E-64 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_014345 bcf9d755868dfdf38d50f20b36d84fb4 217 Pfam PF00677 Lumazine binding domain 100 184 4.0E-23 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_014345 bcf9d755868dfdf38d50f20b36d84fb4 217 Pfam PF00677 Lumazine binding domain 3 87 2.7E-19 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_014345 bcf9d755868dfdf38d50f20b36d84fb4 217 SUPERFAMILY SSF63380 93 196 2.21E-31 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D172_014345 bcf9d755868dfdf38d50f20b36d84fb4 217 Gene3D G3DSA:2.40.30.20 1 89 1.1E-24 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_014345 bcf9d755868dfdf38d50f20b36d84fb4 217 Gene3D G3DSA:2.40.30.20 102 203 2.1E-32 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_005245 c066ed8a05ddf1151c337c2e0b6a1006 227 SUPERFAMILY SSF52317 1 226 1.53E-75 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_005245 c066ed8a05ddf1151c337c2e0b6a1006 227 Gene3D G3DSA:3.40.50.880 1 227 9.3E-79 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_005245 c066ed8a05ddf1151c337c2e0b6a1006 227 Pfam PF01965 DJ-1/PfpI family 28 223 1.8E-15 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 D172_006035 839bfe9fcd41788919094ac58dd30d9e 111 Pfam PF06877 Regulator of ribonuclease activity B 6 104 3.9E-21 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain D172_006035 839bfe9fcd41788919094ac58dd30d9e 111 SUPERFAMILY SSF89946 1 107 4.18E-28 T 14-10-2018 IPR036701 RraB-like superfamily D172_006035 839bfe9fcd41788919094ac58dd30d9e 111 Gene3D G3DSA:3.30.70.970 2 111 3.2E-7 T 14-10-2018 IPR036701 RraB-like superfamily D172_003715 31c36f19232363a0f75a2ec92235399c 471 Gene3D G3DSA:2.20.200.10 101 345 7.0E-99 T 14-10-2018 D172_003715 31c36f19232363a0f75a2ec92235399c 471 Pfam PF02321 Outer membrane efflux protein 64 247 1.6E-23 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D172_003715 31c36f19232363a0f75a2ec92235399c 471 Pfam PF02321 Outer membrane efflux protein 277 454 2.8E-20 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D172_003715 31c36f19232363a0f75a2ec92235399c 471 Gene3D G3DSA:1.20.1600.10 54 456 7.0E-99 T 14-10-2018 D172_003715 31c36f19232363a0f75a2ec92235399c 471 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 455 4.4E-77 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 D172_003715 31c36f19232363a0f75a2ec92235399c 471 SUPERFAMILY SSF56954 5 457 5.1E-89 T 14-10-2018 D172_007200 d7e3339a483bd95191e053879d09352f 156 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 1 156 32.231 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D172_007200 d7e3339a483bd95191e053879d09352f 156 Gene3D G3DSA:3.30.70.640 1 156 7.6E-63 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D172_007200 d7e3339a483bd95191e053879d09352f 156 SUPERFAMILY SSF55040 9 153 3.01E-55 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D172_007200 d7e3339a483bd95191e053879d09352f 156 Pfam PF01967 MoaC family 13 148 2.7E-49 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D172_007200 d7e3339a483bd95191e053879d09352f 156 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 2 150 2.8E-57 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 D172_007355 75196415f929251933c01422e13bb4b6 102 Gene3D G3DSA:3.30.750.24 2 102 3.8E-20 T 14-10-2018 IPR036513 STAS domain superfamily D172_007355 75196415f929251933c01422e13bb4b6 102 SUPERFAMILY SSF52091 2 101 1.57E-20 T 14-10-2018 IPR036513 STAS domain superfamily D172_007355 75196415f929251933c01422e13bb4b6 102 Pfam PF01740 STAS domain 3 98 6.7E-14 T 14-10-2018 IPR002645 STAS domain D172_007330 1bb840f16dded924bae5714d2cfde65a 234 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 187 215 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D172_007330 1bb840f16dded924bae5714d2cfde65a 234 SUPERFAMILY SSF51161 113 232 5.24E-31 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily D172_007330 1bb840f16dded924bae5714d2cfde65a 234 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 179 213 1.3E-7 T 14-10-2018 IPR001451 Hexapeptide repeat D172_007330 1bb840f16dded924bae5714d2cfde65a 234 Gene3D G3DSA:2.160.10.10 66 234 1.1E-34 T 14-10-2018 D172_006445 931b99b7f218530208755891c8531554 326 SUPERFAMILY SSF55681 91 326 2.58E-82 T 14-10-2018 D172_006445 931b99b7f218530208755891c8531554 326 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 7 325 49.341 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 D172_006445 931b99b7f218530208755891c8531554 326 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 86 2.4E-25 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 D172_006445 931b99b7f218530208755891c8531554 326 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 37 325 1.5E-115 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 D172_006445 931b99b7f218530208755891c8531554 326 Gene3D G3DSA:3.30.930.10 6 326 4.4E-126 T 14-10-2018 D172_006445 931b99b7f218530208755891c8531554 326 Pfam PF01409 tRNA synthetases class II core domain (F) 91 325 7.4E-107 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 D172_006445 931b99b7f218530208755891c8531554 326 SUPERFAMILY SSF46589 12 98 1.46E-23 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 D172_009010 5ff5179754c2ecf18cb46a4dfb223aa8 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 D172_009010 5ff5179754c2ecf18cb46a4dfb223aa8 385 SUPERFAMILY SSF56645 1 240 1.14E-81 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 D172_009010 5ff5179754c2ecf18cb46a4dfb223aa8 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 D172_009010 5ff5179754c2ecf18cb46a4dfb223aa8 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 3.1E-48 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 D172_009010 5ff5179754c2ecf18cb46a4dfb223aa8 385 Gene3D G3DSA:1.10.540.10 1 117 8.0E-37 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 D172_009010 5ff5179754c2ecf18cb46a4dfb223aa8 385 SUPERFAMILY SSF47203 226 379 6.6E-59 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 D172_009010 5ff5179754c2ecf18cb46a4dfb223aa8 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 9.2E-26 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 D172_009010 5ff5179754c2ecf18cb46a4dfb223aa8 385 Gene3D G3DSA:2.40.110.10 120 232 5.2E-43 T 14-10-2018 D172_009010 5ff5179754c2ecf18cb46a4dfb223aa8 385 PIRSF PIRSF016578 3 382 1.0E-23 T 14-10-2018 D172_009010 5ff5179754c2ecf18cb46a4dfb223aa8 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 3.8E-31 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 D172_009010 5ff5179754c2ecf18cb46a4dfb223aa8 385 Gene3D G3DSA:1.20.140.10 233 385 3.5E-54 T 14-10-2018 D172_014340 88cae35cdc25319b6103dada14d77e8c 370 SUPERFAMILY SSF142695 205 368 1.22E-45 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D172_014340 88cae35cdc25319b6103dada14d77e8c 370 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 36.695 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_014340 88cae35cdc25319b6103dada14d77e8c 370 Gene3D G3DSA:3.40.50.10990 206 369 1.5E-28 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D172_014340 88cae35cdc25319b6103dada14d77e8c 370 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.2E-80 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_014340 88cae35cdc25319b6103dada14d77e8c 370 Pfam PF00925 GTP cyclohydrolase II 208 367 4.1E-37 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D172_014340 88cae35cdc25319b6103dada14d77e8c 370 SUPERFAMILY SSF55821 3 201 3.66E-83 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily D172_014340 88cae35cdc25319b6103dada14d77e8c 370 PIRSF PIRSF001259 1 370 3.0E-122 T 14-10-2018 D172_014340 88cae35cdc25319b6103dada14d77e8c 370 Gene3D G3DSA:3.90.870.10 1 205 7.0E-84 T 14-10-2018 D172_014340 88cae35cdc25319b6103dada14d77e8c 370 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 199 3.5E-72 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_012780 8dd922571a33c757fb8c8e11823b1b92 633 Pfam PF13616 PPIC-type PPIASE domain 260 366 1.1E-27 T 14-10-2018 D172_012780 8dd922571a33c757fb8c8e11823b1b92 633 SUPERFAMILY SSF109998 40 241 1.96E-30 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily D172_012780 8dd922571a33c757fb8c8e11823b1b92 633 Gene3D G3DSA:1.10.4030.30 247 378 1.2E-33 T 14-10-2018 D172_012780 8dd922571a33c757fb8c8e11823b1b92 633 SUPERFAMILY SSF54534 264 368 8.5E-28 T 14-10-2018 D172_012780 8dd922571a33c757fb8c8e11823b1b92 633 Pfam PF13624 SurA N-terminal domain 1 165 4.8E-48 T 14-10-2018 D172_012780 8dd922571a33c757fb8c8e11823b1b92 633 Gene3D G3DSA:3.10.50.40 268 367 1.2E-33 T 14-10-2018 D172_012780 8dd922571a33c757fb8c8e11823b1b92 633 Gene3D G3DSA:1.10.4030.30 36 206 5.8E-12 T 14-10-2018 D172_015120 03479e50fe9ee3d27bfd6dc0f99afe32 369 SUPERFAMILY SSF52540 43 197 9.19E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_015120 03479e50fe9ee3d27bfd6dc0f99afe32 369 Gene3D G3DSA:3.40.50.300 33 197 2.0E-22 T 14-10-2018 D172_015120 03479e50fe9ee3d27bfd6dc0f99afe32 369 Pfam PF03969 AFG1-like ATPase 313 368 3.1E-16 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 D172_015120 03479e50fe9ee3d27bfd6dc0f99afe32 369 Pfam PF03969 AFG1-like ATPase 10 287 4.4E-84 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 D172_015885 3e7c795fe5d9e3c49da1233c7209557d 106 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 11 98 2.0E-46 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 D172_015885 3e7c795fe5d9e3c49da1233c7209557d 106 Gene3D G3DSA:1.10.140.10 2 104 5.6E-55 T 14-10-2018 IPR023453 Methionine repressor MetJ domain superfamily D172_015885 3e7c795fe5d9e3c49da1233c7209557d 106 Pfam PF01340 Met Apo-repressor, MetJ 3 99 9.6E-60 T 14-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 D172_015885 3e7c795fe5d9e3c49da1233c7209557d 106 SUPERFAMILY SSF47598 2 102 7.56E-56 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 D172_010455 d010c5f41c72efa6e3e6448427d685cc 135 Gene3D G3DSA:1.25.40.10 14 134 5.8E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_010455 d010c5f41c72efa6e3e6448427d685cc 135 SUPERFAMILY SSF48452 46 119 3.37E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_010790 6147bb39a14006756879f3caddc6c48e 392 Pfam PF13437 HlyD family secretion protein 186 294 2.5E-10 T 14-10-2018 D172_010790 6147bb39a14006756879f3caddc6c48e 392 Gene3D G3DSA:2.40.30.170 54 307 1.6E-50 T 14-10-2018 D172_010790 6147bb39a14006756879f3caddc6c48e 392 Pfam PF13533 Biotin-lipoyl like 73 117 1.5E-5 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain D172_010790 6147bb39a14006756879f3caddc6c48e 392 Gene3D G3DSA:1.10.287.470 104 182 1.6E-50 T 14-10-2018 D172_010790 6147bb39a14006756879f3caddc6c48e 392 Gene3D G3DSA:2.40.50.100 67 216 1.6E-50 T 14-10-2018 D172_010790 6147bb39a14006756879f3caddc6c48e 392 Gene3D G3DSA:2.40.420.20 308 372 1.6E-50 T 14-10-2018 D172_010790 6147bb39a14006756879f3caddc6c48e 392 SUPERFAMILY SSF111369 56 273 2.35E-21 T 14-10-2018 D172_010790 6147bb39a14006756879f3caddc6c48e 392 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 374 5.9E-40 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D172_015860 0f3b2214693156c5aa86b55eac8c4f80 190 Pfam PF05137 Fimbrial assembly protein (PilN) 101 175 8.8E-14 T 14-10-2018 IPR007813 Fimbrial assembly PilN D172_009180 32703fb6619a07f5b140caabf08df402 236 Hamap MF_00238 Cytidylate kinase [cmk]. 7 227 33.428 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 D172_009180 32703fb6619a07f5b140caabf08df402 236 SUPERFAMILY SSF52540 6 224 5.33E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_009180 32703fb6619a07f5b140caabf08df402 236 Gene3D G3DSA:3.40.50.300 4 231 2.6E-81 T 14-10-2018 D172_009180 32703fb6619a07f5b140caabf08df402 236 TIGRFAM TIGR00017 cmk: cytidylate kinase 7 221 1.4E-79 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 D172_009180 32703fb6619a07f5b140caabf08df402 236 Pfam PF02224 Cytidylate kinase 9 222 6.8E-75 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 D172_006835 2a44c343f5829372f49217547e27774f 245 ProSitePatterns PS00042 Crp-type HTH domain signature. 191 214 - T 14-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 D172_006835 2a44c343f5829372f49217547e27774f 245 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 205 220 4.8E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D172_006835 2a44c343f5829372f49217547e27774f 245 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 189 205 4.8E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D172_006835 2a44c343f5829372f49217547e27774f 245 SUPERFAMILY SSF46785 161 240 5.89E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_006835 2a44c343f5829372f49217547e27774f 245 SMART SM00100 26 147 3.2E-18 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain D172_006835 2a44c343f5829372f49217547e27774f 245 Gene3D G3DSA:1.10.10.10 161 242 7.7E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_006835 2a44c343f5829372f49217547e27774f 245 SMART SM00419 183 231 6.0E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D172_006835 2a44c343f5829372f49217547e27774f 245 Gene3D G3DSA:2.60.120.10 39 160 1.0E-45 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_006835 2a44c343f5829372f49217547e27774f 245 Pfam PF00027 Cyclic nucleotide-binding domain 47 129 1.2E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain D172_006835 2a44c343f5829372f49217547e27774f 245 Pfam PF13545 Crp-like helix-turn-helix domain 164 237 6.3E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 D172_006835 2a44c343f5829372f49217547e27774f 245 SUPERFAMILY SSF51206 19 157 2.88E-27 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like D172_005200 f3b4556cbbfd91d9c998456e3473927c 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 6.8E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_005200 f3b4556cbbfd91d9c998456e3473927c 224 SUPERFAMILY SSF52172 4 119 1.57E-36 T 14-10-2018 IPR011006 CheY-like superfamily D172_005200 f3b4556cbbfd91d9c998456e3473927c 224 Pfam PF00072 Response regulator receiver domain 5 114 1.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005200 f3b4556cbbfd91d9c998456e3473927c 224 SMART SM00448 3 113 3.6E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005200 f3b4556cbbfd91d9c998456e3473927c 224 Gene3D G3DSA:1.10.10.10 131 223 9.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_005200 f3b4556cbbfd91d9c998456e3473927c 224 SUPERFAMILY SSF46894 130 221 2.27E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_005200 f3b4556cbbfd91d9c998456e3473927c 224 Gene3D G3DSA:3.40.50.2300 1 130 7.0E-33 T 14-10-2018 D172_005200 f3b4556cbbfd91d9c998456e3473927c 224 SMART SM00862 144 220 9.6E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_018165 87e713994c9d4a619676f7386d4c5613 977 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 162 4.0E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_018165 87e713994c9d4a619676f7386d4c5613 977 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 41 977 4.6E-187 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_018165 87e713994c9d4a619676f7386d4c5613 977 SUPERFAMILY SSF56935 32 977 1.23E-77 T 14-10-2018 D172_018165 87e713994c9d4a619676f7386d4c5613 977 Pfam PF00593 TonB dependent receptor 405 976 2.1E-31 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_018165 87e713994c9d4a619676f7386d4c5613 977 Gene3D G3DSA:2.170.130.10 48 166 7.6E-18 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_012410 8c7305fffb88257e265156367618cd64 161 SUPERFAMILY SSF89919 1 105 5.36E-35 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily D172_012410 8c7305fffb88257e265156367618cd64 161 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 98 2.0E-44 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 D172_012410 8c7305fffb88257e265156367618cd64 161 Gene3D G3DSA:3.30.300.20 1 106 9.6E-41 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta D172_012410 8c7305fffb88257e265156367618cd64 161 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 111 26.482 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 D172_012410 8c7305fffb88257e265156367618cd64 161 Pfam PF02033 Ribosome-binding factor A 6 110 4.2E-33 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 D172_012410 8c7305fffb88257e265156367618cd64 161 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 5 115 6.0E-39 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 D172_009525 13d13e7e9a265b491a3a403060c29c58 621 PIRSF PIRSF001217 2 620 1.6E-206 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 D172_009525 13d13e7e9a265b491a3a403060c29c58 621 Pfam PF01343 Peptidase family S49 132 289 2.0E-25 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 D172_009525 13d13e7e9a265b491a3a403060c29c58 621 Pfam PF01343 Peptidase family S49 389 539 1.4E-49 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 D172_009525 13d13e7e9a265b491a3a403060c29c58 621 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 10 612 5.7E-180 T 14-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 D172_009525 13d13e7e9a265b491a3a403060c29c58 621 Gene3D G3DSA:3.90.226.10 88 309 8.7E-155 T 14-10-2018 D172_009525 13d13e7e9a265b491a3a403060c29c58 621 SUPERFAMILY SSF52096 321 525 1.3E-43 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_009525 13d13e7e9a265b491a3a403060c29c58 621 Gene3D G3DSA:3.40.1750.10 180 495 8.7E-155 T 14-10-2018 D172_009525 13d13e7e9a265b491a3a403060c29c58 621 SUPERFAMILY SSF52096 23 277 1.49E-21 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_009525 13d13e7e9a265b491a3a403060c29c58 621 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 325 538 5.2E-51 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 D172_009525 13d13e7e9a265b491a3a403060c29c58 621 Gene3D G3DSA:3.90.226.10 312 538 8.7E-155 T 14-10-2018 D172_003790 46e7bb6c1d3cda5e15a07f5ff51a03f8 963 Gene3D G3DSA:3.40.640.10 527 757 1.1E-60 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_003790 46e7bb6c1d3cda5e15a07f5ff51a03f8 963 Gene3D G3DSA:3.40.640.10 97 356 2.9E-102 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_003790 46e7bb6c1d3cda5e15a07f5ff51a03f8 963 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 10 961 25.021 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 D172_003790 46e7bb6c1d3cda5e15a07f5ff51a03f8 963 SUPERFAMILY SSF53383 462 956 3.9E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_003790 46e7bb6c1d3cda5e15a07f5ff51a03f8 963 Pfam PF02347 Glycine cleavage system P-protein 463 738 9.9E-9 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 D172_003790 46e7bb6c1d3cda5e15a07f5ff51a03f8 963 Pfam PF02347 Glycine cleavage system P-protein 18 440 1.3E-176 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 D172_003790 46e7bb6c1d3cda5e15a07f5ff51a03f8 963 SUPERFAMILY SSF53383 19 441 2.16E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_003790 46e7bb6c1d3cda5e15a07f5ff51a03f8 963 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 19 955 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 D172_003790 46e7bb6c1d3cda5e15a07f5ff51a03f8 963 Gene3D G3DSA:3.90.1150.10 769 897 1.2E-39 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_012295 da626a24bcc2f085abdfc0a68a76fccc 654 Gene3D G3DSA:1.50.10.20 329 465 6.3E-11 T 14-10-2018 D172_012295 da626a24bcc2f085abdfc0a68a76fccc 654 SUPERFAMILY SSF48239 344 452 3.66E-13 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid D172_013325 606d3322d5555c96b9b68a8a91ebe921 376 Gene3D G3DSA:3.40.50.2300 2 131 8.2E-30 T 14-10-2018 D172_013325 606d3322d5555c96b9b68a8a91ebe921 376 PIRSF PIRSF000876 1 374 2.7E-127 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 D172_013325 606d3322d5555c96b9b68a8a91ebe921 376 Pfam PF00072 Response regulator receiver domain 5 109 1.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_013325 606d3322d5555c96b9b68a8a91ebe921 376 SMART SM00448 3 126 1.7E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_013325 606d3322d5555c96b9b68a8a91ebe921 376 Pfam PF01339 CheB methylesterase 189 369 1.4E-60 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 D172_013325 606d3322d5555c96b9b68a8a91ebe921 376 SUPERFAMILY SSF52172 3 109 2.42E-25 T 14-10-2018 IPR011006 CheY-like superfamily D172_013325 606d3322d5555c96b9b68a8a91ebe921 376 SUPERFAMILY SSF52738 184 371 4.45E-63 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal D172_013325 606d3322d5555c96b9b68a8a91ebe921 376 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 374 38.672 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 D172_013325 606d3322d5555c96b9b68a8a91ebe921 376 Gene3D G3DSA:3.40.50.180 179 375 1.4E-65 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal D172_016525 07546cbacce21849727bda28b8b6e832 343 Pfam PF00072 Response regulator receiver domain 4 108 3.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_016525 07546cbacce21849727bda28b8b6e832 343 SUPERFAMILY SSF52172 1 107 1.25E-28 T 14-10-2018 IPR011006 CheY-like superfamily D172_016525 07546cbacce21849727bda28b8b6e832 343 SMART SM00448 2 114 4.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_016525 07546cbacce21849727bda28b8b6e832 343 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 341 38.43 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 D172_016525 07546cbacce21849727bda28b8b6e832 343 SUPERFAMILY SSF52738 156 339 1.28E-62 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal D172_016525 07546cbacce21849727bda28b8b6e832 343 Pfam PF01339 CheB methylesterase 158 336 1.1E-52 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 D172_016525 07546cbacce21849727bda28b8b6e832 343 PIRSF PIRSF000876 1 343 2.1E-126 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 D172_016525 07546cbacce21849727bda28b8b6e832 343 Gene3D G3DSA:3.40.50.180 150 343 3.4E-67 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal D172_016525 07546cbacce21849727bda28b8b6e832 343 Gene3D G3DSA:3.40.50.2300 1 131 9.3E-32 T 14-10-2018 D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 Pfam PF14842 FliG N-terminal domain 17 118 2.8E-29 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 Gene3D G3DSA:1.10.220.30 101 206 1.2E-29 T 14-10-2018 D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 PIRSF PIRSF003161 12 346 3.2E-114 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 SUPERFAMILY SSF48029 14 129 6.54E-22 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 Pfam PF01706 FliG C-terminal domain 231 337 1.1E-39 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 Pfam PF14841 FliG middle domain 129 200 9.0E-27 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 Gene3D G3DSA:1.10.220.30 12 97 5.4E-19 T 14-10-2018 D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 SUPERFAMILY SSF48029 127 338 2.22E-68 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 Gene3D G3DSA:1.10.220.30 208 346 2.6E-43 T 14-10-2018 D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 47 73 3.1E-57 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 127 150 3.1E-57 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 239 259 3.1E-57 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 285 311 3.1E-57 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 18 34 3.1E-57 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 261 281 3.1E-57 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 208 233 3.1E-57 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D172_013425 f8fa1aca25f9eae49325cb4a93dbbce4 346 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 14 344 2.8E-95 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 D172_011255 b3f290dd2d10b5ad094d972c5af39ef6 218 Pfam PF01966 HD domain 33 135 1.6E-8 T 14-10-2018 IPR006674 HD domain D172_011255 b3f290dd2d10b5ad094d972c5af39ef6 218 SUPERFAMILY SSF109604 14 217 1.98E-59 T 14-10-2018 D172_011255 b3f290dd2d10b5ad094d972c5af39ef6 218 SMART SM00471 28 145 3.2E-4 T 14-10-2018 IPR003607 HD/PDEase domain D172_011255 b3f290dd2d10b5ad094d972c5af39ef6 218 Gene3D G3DSA:1.10.3210.50 9 218 1.5E-65 T 14-10-2018 D172_012745 7fbdd5d9bc3a78a12e2a22724c03ac3e 354 SUPERFAMILY SSF52540 10 252 4.52E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_012745 7fbdd5d9bc3a78a12e2a22724c03ac3e 354 SMART SM00382 30 182 4.3E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_012745 7fbdd5d9bc3a78a12e2a22724c03ac3e 354 SUPERFAMILY SSF46689 295 350 4.3E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_012745 7fbdd5d9bc3a78a12e2a22724c03ac3e 354 Gene3D G3DSA:1.10.8.60 182 265 1.7E-24 T 14-10-2018 D172_012745 7fbdd5d9bc3a78a12e2a22724c03ac3e 354 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 331 351 1.0E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_012745 7fbdd5d9bc3a78a12e2a22724c03ac3e 354 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 314 331 1.0E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_012745 7fbdd5d9bc3a78a12e2a22724c03ac3e 354 Pfam PF02954 Bacterial regulatory protein, Fis family 310 348 3.7E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_012745 7fbdd5d9bc3a78a12e2a22724c03ac3e 354 Gene3D G3DSA:1.10.10.60 301 351 7.1E-10 T 14-10-2018 D172_012745 7fbdd5d9bc3a78a12e2a22724c03ac3e 354 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 10 348 1.5E-170 T 14-10-2018 IPR014317 Transcription activator PspF D172_012745 7fbdd5d9bc3a78a12e2a22724c03ac3e 354 Gene3D G3DSA:3.40.50.300 1 181 4.0E-59 T 14-10-2018 D172_012745 7fbdd5d9bc3a78a12e2a22724c03ac3e 354 Pfam PF00158 Sigma-54 interaction domain 10 173 1.2E-60 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D172_012745 7fbdd5d9bc3a78a12e2a22724c03ac3e 354 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 224 233 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site D172_002885 19def92770795a95677e9509986d1921 310 Gene3D G3DSA:2.40.160.10 20 310 7.7E-50 T 14-10-2018 IPR023614 Porin domain superfamily D172_002885 19def92770795a95677e9509986d1921 310 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 172 184 6.1E-5 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 D172_002885 19def92770795a95677e9509986d1921 310 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 47 58 6.1E-5 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 D172_002885 19def92770795a95677e9509986d1921 310 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 302 310 6.1E-5 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 D172_002885 19def92770795a95677e9509986d1921 310 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 93 103 6.1E-5 T 14-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 D172_002885 19def92770795a95677e9509986d1921 310 Pfam PF13609 Gram-negative porin 11 295 1.2E-37 T 14-10-2018 D172_002885 19def92770795a95677e9509986d1921 310 SUPERFAMILY SSF56935 23 310 2.66E-54 T 14-10-2018 D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 Gene3D G3DSA:3.30.450.20 264 378 3.3E-33 T 14-10-2018 D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 SUPERFAMILY SSF58104 442 723 1.12E-75 T 14-10-2018 D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 SUPERFAMILY SSF55785 25 130 2.62E-23 T 14-10-2018 IPR035965 PAS domain superfamily D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 Gene3D G3DSA:1.10.287.950 421 724 1.1E-87 T 14-10-2018 D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 573 600 5.2E-54 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 650 679 5.2E-54 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 602 631 5.2E-54 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 496 525 5.2E-54 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 Gene3D G3DSA:3.30.450.20 6 139 5.8E-22 T 14-10-2018 D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 Gene3D G3DSA:3.30.450.20 140 263 1.1E-22 T 14-10-2018 D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 SMART SM00091 262 327 7.1 T 14-10-2018 IPR000014 PAS domain D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 SMART SM00091 12 82 3.2 T 14-10-2018 IPR000014 PAS domain D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 SMART SM00091 136 204 1.9 T 14-10-2018 IPR000014 PAS domain D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 Pfam PF08447 PAS fold 36 121 3.9E-13 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 Pfam PF08447 PAS fold 158 244 1.0E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 131 1.1E-11 T 14-10-2018 IPR000014 PAS domain D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 144 257 7.2E-14 T 14-10-2018 IPR000014 PAS domain D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 533 690 1.6E-54 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 SMART SM00283 475 722 8.6E-93 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 SMART SM00086 209 251 0.0098 T 14-10-2018 IPR001610 PAC motif D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 SMART SM00086 87 129 4.0E-5 T 14-10-2018 IPR001610 PAC motif D172_016540 46a111a05ee25c5cbe5a8a4f8feef34b 768 SUPERFAMILY SSF55785 146 253 6.11E-24 T 14-10-2018 IPR035965 PAS domain superfamily D172_004310 91029f4db109092ce53dce4bedbcd214 494 Gene3D G3DSA:1.10.10.350 371 493 8.2E-24 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 D172_004310 91029f4db109092ce53dce4bedbcd214 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 2.9E-21 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D172_004310 91029f4db109092ce53dce4bedbcd214 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 2.9E-21 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D172_004310 91029f4db109092ce53dce4bedbcd214 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 2.9E-21 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D172_004310 91029f4db109092ce53dce4bedbcd214 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 216 2.9E-21 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D172_004310 91029f4db109092ce53dce4bedbcd214 494 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 202 2.9E-21 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D172_004310 91029f4db109092ce53dce4bedbcd214 494 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 471 29.934 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 D172_004310 91029f4db109092ce53dce4bedbcd214 494 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_004310 91029f4db109092ce53dce4bedbcd214 494 SUPERFAMILY SSF48163 313 471 7.98E-34 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 D172_004310 91029f4db109092ce53dce4bedbcd214 494 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 468 7.9E-142 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 D172_004310 91029f4db109092ce53dce4bedbcd214 494 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 319 9.3E-107 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 D172_004310 91029f4db109092ce53dce4bedbcd214 494 SUPERFAMILY SSF52374 3 307 2.06E-107 T 14-10-2018 D172_004310 91029f4db109092ce53dce4bedbcd214 494 Gene3D G3DSA:3.40.50.620 1 328 1.0E-144 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_011875 dde2bb563d74f66e539a2c77c919ccff 242 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 9 222 2.3E-35 T 14-10-2018 D172_011875 dde2bb563d74f66e539a2c77c919ccff 242 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 3 240 26.204 T 14-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 D172_010590 d585ac5ac30ffca7a6fc2652e6938f03 593 Gene3D G3DSA:3.30.420.240 402 574 1.3E-6 T 14-10-2018 D172_010590 d585ac5ac30ffca7a6fc2652e6938f03 593 Pfam PF17289 Terminase RNaseH-like domain 419 574 1.4E-21 T 14-10-2018 IPR035421 Terminase, large subunit gp17-like D172_010590 d585ac5ac30ffca7a6fc2652e6938f03 593 Pfam PF03237 Terminase-like family 167 390 3.2E-35 T 14-10-2018 IPR004921 Terminase large subunit, T4likevirus-type D172_010590 d585ac5ac30ffca7a6fc2652e6938f03 593 Gene3D G3DSA:3.40.50.300 97 311 4.1E-23 T 14-10-2018 D172_010590 d585ac5ac30ffca7a6fc2652e6938f03 593 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 7 64 1.1E-5 T 14-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 D172_013355 2975acc208ab5dc1da38a87f02546418 494 Pfam PF00448 SRP54-type protein, GTPase domain 278 466 8.2E-42 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D172_013355 2975acc208ab5dc1da38a87f02546418 494 Gene3D G3DSA:1.20.120.1380 248 460 1.8E-60 T 14-10-2018 D172_013355 2975acc208ab5dc1da38a87f02546418 494 Gene3D G3DSA:3.40.50.300 271 457 1.8E-60 T 14-10-2018 D172_013355 2975acc208ab5dc1da38a87f02546418 494 SMART SM00962 276 469 2.5E-67 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 D172_013355 2975acc208ab5dc1da38a87f02546418 494 SUPERFAMILY SSF52540 272 465 4.56E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_013355 2975acc208ab5dc1da38a87f02546418 494 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 364 1.4E-86 T 14-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 D172_013355 2975acc208ab5dc1da38a87f02546418 494 SMART SM00382 275 446 6.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_001685 bcd890c474782477427114a3fe836432 106 SUPERFAMILY SSF54913 2 105 2.59E-35 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta D172_001685 bcd890c474782477427114a3fe836432 106 Gene3D G3DSA:3.30.70.120 1 106 9.6E-37 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal D172_001685 bcd890c474782477427114a3fe836432 106 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 4.4E-34 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 D172_020595 8c7e70e7f9ff07dd9f9e7d99f62b292b 267 SUPERFAMILY SSF52540 5 236 1.2E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_020595 8c7e70e7f9ff07dd9f9e7d99f62b292b 267 SMART SM00382 26 219 2.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_020595 8c7e70e7f9ff07dd9f9e7d99f62b292b 267 Gene3D G3DSA:3.40.50.300 1 261 1.4E-62 T 14-10-2018 D172_020595 8c7e70e7f9ff07dd9f9e7d99f62b292b 267 Pfam PF00005 ABC transporter 17 172 2.6E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_019910 c366ce379f99ad8febaa73a97df12e1c 170 PIRSF PIRSF006173 3 166 2.1E-49 T 14-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 D172_019910 c366ce379f99ad8febaa73a97df12e1c 170 Pfam PF03692 Putative zinc- or iron-chelating domain 29 109 6.5E-9 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein D172_002510 aa0f46da27a73e5245396951744d4cba 526 Pfam PF00474 Sodium:solute symporter family 32 440 2.1E-42 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D172_002510 aa0f46da27a73e5245396951744d4cba 526 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 32 440 4.2E-66 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D172_002510 aa0f46da27a73e5245396951744d4cba 526 Gene3D G3DSA:1.20.1730.10 21 525 8.4E-108 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Gene3D G3DSA:2.40.50.100 714 788 7.9E-30 T 14-10-2018 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.185 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 2.7E-29 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Gene3D G3DSA:3.90.1100.10 643 713 3.9E-20 T 14-10-2018 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Gene3D G3DSA:3.90.1100.10 18 174 2.9E-56 T 14-10-2018 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 7.7E-22 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 1.2E-156 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Gene3D G3DSA:3.90.1110.10 316 441 3.0E-34 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Pfam PF04563 RNA polymerase beta subunit 27 500 6.8E-51 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 223 3.0E-6 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Pfam PF04561 RNA polymerase Rpb2, domain 2 355 454 3.0E-15 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Gene3D G3DSA:2.40.270.10 790 834 1.3E-6 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Gene3D G3DSA:2.40.50.150 835 953 1.4E-43 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Gene3D G3DSA:3.90.1800.10 1251 1308 7.8E-11 T 14-10-2018 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 2.3E-27 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Gene3D G3DSA:2.40.270.10 992 1241 1.3E-87 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 Gene3D G3DSA:3.90.1100.10 442 631 1.2E-69 T 14-10-2018 D172_001620 ab1e6de99472084a34836d7bb4000da9 1341 SUPERFAMILY SSF64484 12 1339 0.0 T 14-10-2018 D172_002600 358f21e22052bd90fbd65a99f5d49db8 964 Pfam PF00271 Helicase conserved C-terminal domain 488 597 1.1E-13 T 14-10-2018 IPR001650 Helicase, C-terminal D172_002600 358f21e22052bd90fbd65a99f5d49db8 964 Gene3D G3DSA:2.30.30.930 55 113 1.1E-19 T 14-10-2018 D172_002600 358f21e22052bd90fbd65a99f5d49db8 964 Gene3D G3DSA:3.40.50.300 425 629 4.3E-44 T 14-10-2018 D172_002600 358f21e22052bd90fbd65a99f5d49db8 964 SUPERFAMILY SSF52540 270 648 7.06E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_002600 358f21e22052bd90fbd65a99f5d49db8 964 Gene3D G3DSA:2.30.30.140 1 53 4.3E-23 T 14-10-2018 D172_002600 358f21e22052bd90fbd65a99f5d49db8 964 SUPERFAMILY SSF52540 124 378 6.07E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_002600 358f21e22052bd90fbd65a99f5d49db8 964 Gene3D G3DSA:3.30.360.80 710 782 4.5E-31 T 14-10-2018 D172_002600 358f21e22052bd90fbd65a99f5d49db8 964 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 963 27.926 T 14-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 D172_002600 358f21e22052bd90fbd65a99f5d49db8 964 Pfam PF12137 RNA polymerase recycling family C-terminal 601 962 6.9E-147 T 14-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 D172_002600 358f21e22052bd90fbd65a99f5d49db8 964 Gene3D G3DSA:3.40.50.10810 149 424 4.7E-90 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily D172_002600 358f21e22052bd90fbd65a99f5d49db8 964 SMART SM00487 149 341 1.4E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_002600 358f21e22052bd90fbd65a99f5d49db8 964 Pfam PF00176 SNF2 family N-terminal domain 173 399 6.9E-17 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 D172_002600 358f21e22052bd90fbd65a99f5d49db8 964 SMART SM00490 513 597 7.9E-12 T 14-10-2018 IPR001650 Helicase, C-terminal D172_009160 825438b2d82e234b4a9d460a74330007 378 SUPERFAMILY SSF48452 194 325 1.59E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_009160 825438b2d82e234b4a9d460a74330007 378 SUPERFAMILY SSF48452 39 233 7.21E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_009160 825438b2d82e234b4a9d460a74330007 378 Gene3D G3DSA:1.25.40.10 167 237 2.5E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_009160 825438b2d82e234b4a9d460a74330007 378 Gene3D G3DSA:1.25.40.10 38 166 3.2E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_003395 7359edabfcec463b1c6dc30e4d503998 90 Gene3D G3DSA:3.30.1340.10 3 89 2.6E-26 T 14-10-2018 IPR035895 HPr-like superfamily D172_003395 7359edabfcec463b1c6dc30e4d503998 90 SUPERFAMILY SSF55594 5 89 3.01E-24 T 14-10-2018 IPR035895 HPr-like superfamily D172_003395 7359edabfcec463b1c6dc30e4d503998 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 5.3E-10 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like D172_003395 7359edabfcec463b1c6dc30e4d503998 90 PRINTS PR00107 Phosphocarrier protein signature 39 54 5.3E-10 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like D172_003395 7359edabfcec463b1c6dc30e4d503998 90 PRINTS PR00107 Phosphocarrier protein signature 54 71 5.3E-10 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like D172_003395 7359edabfcec463b1c6dc30e4d503998 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site D172_003395 7359edabfcec463b1c6dc30e4d503998 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 82 2.4E-22 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like D172_003395 7359edabfcec463b1c6dc30e4d503998 90 Pfam PF00381 PTS HPr component phosphorylation site 5 83 2.5E-23 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like D172_000815 be95b86ce752b2f36dad388214c2adc8 488 SUPERFAMILY SSF143968 323 485 1.7E-67 T 14-10-2018 D172_000815 be95b86ce752b2f36dad388214c2adc8 488 Gene3D G3DSA:3.40.1670.10 337 454 6.0E-52 T 14-10-2018 D172_000815 be95b86ce752b2f36dad388214c2adc8 488 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 73.463 T 14-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 D172_000815 be95b86ce752b2f36dad388214c2adc8 488 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 8.0E-181 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 D172_000815 be95b86ce752b2f36dad388214c2adc8 488 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 6.8E-176 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 D172_000815 be95b86ce752b2f36dad388214c2adc8 488 SUPERFAMILY SSF50475 3 322 1.02E-129 T 14-10-2018 D172_000815 be95b86ce752b2f36dad388214c2adc8 488 Gene3D G3DSA:1.20.5.570 455 488 2.4E-13 T 14-10-2018 D172_019500 34a220b2d8896a1b24cb41c225c18d84 687 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 14 102 4.1E-15 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 D172_019500 34a220b2d8896a1b24cb41c225c18d84 687 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 10 677 5.1E-266 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 D172_019500 34a220b2d8896a1b24cb41c225c18d84 687 Pfam PF00128 Alpha amylase, catalytic domain 191 273 5.2E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D172_019500 34a220b2d8896a1b24cb41c225c18d84 687 Gene3D G3DSA:3.20.20.80 144 580 1.6E-163 T 14-10-2018 D172_019500 34a220b2d8896a1b24cb41c225c18d84 687 Gene3D G3DSA:2.60.40.10 1 142 1.2E-36 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_019500 34a220b2d8896a1b24cb41c225c18d84 687 SUPERFAMILY SSF51445 147 572 3.52E-118 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_019500 34a220b2d8896a1b24cb41c225c18d84 687 Gene3D G3DSA:2.60.40.1180 585 679 5.1E-8 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta D172_019500 34a220b2d8896a1b24cb41c225c18d84 687 SUPERFAMILY SSF51011 586 677 6.65E-14 T 14-10-2018 D172_019500 34a220b2d8896a1b24cb41c225c18d84 687 SMART SM00642 185 566 2.0E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D172_019500 34a220b2d8896a1b24cb41c225c18d84 687 SUPERFAMILY SSF81296 10 118 3.8E-32 T 14-10-2018 IPR014756 Immunoglobulin E-set D172_009615 d3f5ad0a330501190266c0126963fcec 232 Gene3D G3DSA:3.40.50.300 3 231 7.0E-64 T 14-10-2018 D172_009615 d3f5ad0a330501190266c0126963fcec 232 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_009615 d3f5ad0a330501190266c0126963fcec 232 SUPERFAMILY SSF52540 5 224 1.6E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_009615 d3f5ad0a330501190266c0126963fcec 232 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 224 3.4E-99 T 14-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 D172_009615 d3f5ad0a330501190266c0126963fcec 232 Pfam PF00005 ABC transporter 25 173 4.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_009615 d3f5ad0a330501190266c0126963fcec 232 SMART SM00382 34 222 5.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_005155 677232f96d26fd9786ffec8dd7a95c11 346 SUPERFAMILY SSF46689 18 114 1.79E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_005155 677232f96d26fd9786ffec8dd7a95c11 346 SUPERFAMILY SSF53098 160 335 4.05E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_005155 677232f96d26fd9786ffec8dd7a95c11 346 Pfam PF00665 Integrase core domain 161 283 5.8E-21 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_005155 677232f96d26fd9786ffec8dd7a95c11 346 Gene3D G3DSA:3.30.420.10 161 325 1.4E-16 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_005155 677232f96d26fd9786ffec8dd7a95c11 346 Pfam PF13551 Winged helix-turn helix 11 74 2.4E-20 T 14-10-2018 D172_000295 677232f96d26fd9786ffec8dd7a95c11 346 SUPERFAMILY SSF46689 18 114 1.79E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_000295 677232f96d26fd9786ffec8dd7a95c11 346 SUPERFAMILY SSF53098 160 335 4.05E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_000295 677232f96d26fd9786ffec8dd7a95c11 346 Pfam PF00665 Integrase core domain 161 283 5.8E-21 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_000295 677232f96d26fd9786ffec8dd7a95c11 346 Gene3D G3DSA:3.30.420.10 161 325 1.4E-16 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_000295 677232f96d26fd9786ffec8dd7a95c11 346 Pfam PF13551 Winged helix-turn helix 11 74 2.4E-20 T 14-10-2018 D172_004175 8e9d064ec15fc88fe8750b2e80f28172 544 SMART SM01049 36 130 4.6E-42 T 14-10-2018 IPR033480 Single Cache domain 2 D172_004175 8e9d064ec15fc88fe8750b2e80f28172 544 SMART SM00283 282 543 5.6E-79 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_004175 8e9d064ec15fc88fe8750b2e80f28172 544 SMART SM00304 213 267 4.8E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_004175 8e9d064ec15fc88fe8750b2e80f28172 544 SUPERFAMILY SSF58104 235 544 2.62E-76 T 14-10-2018 D172_004175 8e9d064ec15fc88fe8750b2e80f28172 544 Pfam PF08269 Cache domain 30 184 6.1E-45 T 14-10-2018 IPR004010 Double Cache domain 2 D172_004175 8e9d064ec15fc88fe8750b2e80f28172 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 380 407 7.4E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_004175 8e9d064ec15fc88fe8750b2e80f28172 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 409 438 7.4E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_004175 8e9d064ec15fc88fe8750b2e80f28172 544 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 9 34 7.4E-21 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_004175 8e9d064ec15fc88fe8750b2e80f28172 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 508 5.4E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_004175 8e9d064ec15fc88fe8750b2e80f28172 544 Gene3D G3DSA:3.30.450.20 35 190 2.7E-61 T 14-10-2018 D172_004175 8e9d064ec15fc88fe8750b2e80f28172 544 Gene3D G3DSA:1.10.287.950 213 544 5.0E-74 T 14-10-2018 D172_013330 f2d5a832276dec5069646f687066fed9 729 SMART SM01231 344 404 1.6E-18 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 D172_013330 f2d5a832276dec5069646f687066fed9 729 Pfam PF01627 Hpt domain 7 99 2.6E-15 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D172_013330 f2d5a832276dec5069646f687066fed9 729 SUPERFAMILY SSF55874 407 590 2.23E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_013330 f2d5a832276dec5069646f687066fed9 729 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 546 9.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013330 f2d5a832276dec5069646f687066fed9 729 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 9.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013330 f2d5a832276dec5069646f687066fed9 729 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 508 9.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013330 f2d5a832276dec5069646f687066fed9 729 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 9.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_013330 f2d5a832276dec5069646f687066fed9 729 SUPERFAMILY SSF50341 591 724 1.83E-28 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 D172_013330 f2d5a832276dec5069646f687066fed9 729 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 345 403 1.2E-12 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 D172_013330 f2d5a832276dec5069646f687066fed9 729 Gene3D G3DSA:2.40.50.180 615 679 5.2E-34 T 14-10-2018 D172_013330 f2d5a832276dec5069646f687066fed9 729 SMART SM00073 5 102 1.2E-20 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D172_013330 f2d5a832276dec5069646f687066fed9 729 Gene3D G3DSA:1.20.120.160 3 137 2.6E-36 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_013330 f2d5a832276dec5069646f687066fed9 729 SMART SM00260 584 724 3.3E-34 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D172_013330 f2d5a832276dec5069646f687066fed9 729 SUPERFAMILY SSF47384 345 405 1.06E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_013330 f2d5a832276dec5069646f687066fed9 729 Gene3D G3DSA:1.10.287.560 344 404 3.8E-19 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 D172_013330 f2d5a832276dec5069646f687066fed9 729 Pfam PF01584 CheW-like domain 598 726 1.5E-22 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D172_013330 f2d5a832276dec5069646f687066fed9 729 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 452 591 1.5E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_013330 f2d5a832276dec5069646f687066fed9 729 SUPERFAMILY SSF47226 5 122 7.85E-30 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_013330 f2d5a832276dec5069646f687066fed9 729 Gene3D G3DSA:2.30.30.40 592 720 5.2E-34 T 14-10-2018 D172_013330 f2d5a832276dec5069646f687066fed9 729 SMART SM00387 449 592 3.7E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_013330 f2d5a832276dec5069646f687066fed9 729 Gene3D G3DSA:3.30.565.10 405 591 5.9E-56 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_018890 d516272c92485a89bbeac41adcc84dfa 208 SUPERFAMILY SSF46689 14 91 2.39E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_018890 d516272c92485a89bbeac41adcc84dfa 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 66 4.5E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_018890 d516272c92485a89bbeac41adcc84dfa 208 Gene3D G3DSA:1.10.357.10 2 204 3.4E-32 T 14-10-2018 D172_018890 d516272c92485a89bbeac41adcc84dfa 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 1.1E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_018890 d516272c92485a89bbeac41adcc84dfa 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 1.1E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_015945 8d01d1c02424d1b908f279449c85d8c3 349 SUPERFAMILY SSF52768 45 324 1.48E-47 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily D172_015945 8d01d1c02424d1b908f279449c85d8c3 349 Pfam PF00491 Arginase family 94 323 7.4E-20 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 D172_015945 8d01d1c02424d1b908f279449c85d8c3 349 Gene3D G3DSA:3.40.800.10 26 338 2.7E-35 T 14-10-2018 D172_001125 33f5de11a53c4761c5c22bd645096f24 127 SUPERFAMILY SSF55174 2 70 2.22E-16 T 14-10-2018 D172_001125 33f5de11a53c4761c5c22bd645096f24 127 Pfam PF13275 S4 domain 8 69 2.9E-22 T 14-10-2018 D172_001125 33f5de11a53c4761c5c22bd645096f24 127 Gene3D G3DSA:3.10.290.10 2 71 8.8E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D172_019675 6af143b269e7e06270f1410f38c85921 1007 SUPERFAMILY SSF55486 209 374 7.08E-16 T 14-10-2018 D172_019675 6af143b269e7e06270f1410f38c85921 1007 Gene3D G3DSA:2.60.40.10 813 886 3.1E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_019675 6af143b269e7e06270f1410f38c85921 1007 Gene3D G3DSA:2.60.40.10 887 974 1.3E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_019675 6af143b269e7e06270f1410f38c85921 1007 SUPERFAMILY SSF49299 891 969 4.45E-16 T 14-10-2018 IPR035986 PKD domain superfamily D172_019675 6af143b269e7e06270f1410f38c85921 1007 Pfam PF00801 PKD domain 826 876 4.8E-8 T 14-10-2018 IPR000601 PKD domain D172_019675 6af143b269e7e06270f1410f38c85921 1007 Pfam PF00801 PKD domain 738 795 5.9E-6 T 14-10-2018 IPR000601 PKD domain D172_019675 6af143b269e7e06270f1410f38c85921 1007 Pfam PF00801 PKD domain 901 952 1.0E-9 T 14-10-2018 IPR000601 PKD domain D172_019675 6af143b269e7e06270f1410f38c85921 1007 Pfam PF05547 Immune inhibitor A peptidase M6 103 726 1.0E-167 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 D172_019675 6af143b269e7e06270f1410f38c85921 1007 Gene3D G3DSA:2.60.40.10 726 810 4.5E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_019675 6af143b269e7e06270f1410f38c85921 1007 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 112 406 5.6E-64 T 14-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 D172_019675 6af143b269e7e06270f1410f38c85921 1007 SUPERFAMILY SSF49299 825 886 6.15E-12 T 14-10-2018 IPR035986 PKD domain superfamily D172_019675 6af143b269e7e06270f1410f38c85921 1007 SUPERFAMILY SSF49299 734 808 1.57E-12 T 14-10-2018 IPR035986 PKD domain superfamily D172_019675 6af143b269e7e06270f1410f38c85921 1007 SMART SM00089 729 807 0.43 T 14-10-2018 IPR022409 PKD/Chitinase domain D172_019675 6af143b269e7e06270f1410f38c85921 1007 SMART SM00089 889 968 3.0E-11 T 14-10-2018 IPR022409 PKD/Chitinase domain D172_019675 6af143b269e7e06270f1410f38c85921 1007 SMART SM00089 812 887 5.1E-10 T 14-10-2018 IPR022409 PKD/Chitinase domain D172_016390 47456ef31f06565adfcc67532d0577ad 419 SUPERFAMILY SSF50182 190 257 1.14E-11 T 14-10-2018 IPR010920 LSM domain superfamily D172_016390 47456ef31f06565adfcc67532d0577ad 419 Gene3D G3DSA:2.30.30.60 207 248 9.0E-6 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily D172_016390 47456ef31f06565adfcc67532d0577ad 419 Pfam PF00924 Mechanosensitive ion channel 149 382 3.2E-42 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 D172_021015 60cb878e346d325c33214f50f0f5d2d6 206 Gene3D G3DSA:1.25.40.10 84 189 1.2E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_021015 60cb878e346d325c33214f50f0f5d2d6 206 SUPERFAMILY SSF48452 88 182 7.59E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_021015 60cb878e346d325c33214f50f0f5d2d6 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 200 3.0E-57 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 D172_021015 60cb878e346d325c33214f50f0f5d2d6 206 PIRSF PIRSF006170 1 205 6.3E-56 T 14-10-2018 IPR026039 Uncharacterised protein family UPF0070 D172_001480 1ac6448d86e3c9df0cc140cd42299064 377 SUPERFAMILY SSF51395 1 356 1.47E-100 T 14-10-2018 D172_001480 1ac6448d86e3c9df0cc140cd42299064 377 Gene3D G3DSA:3.20.20.70 1 362 5.4E-117 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_001480 1ac6448d86e3c9df0cc140cd42299064 377 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 330 1.6E-72 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 D172_001110 89b970fbbd83c5492df68349184697a5 246 PIRSF PIRSF000857 1 244 8.5E-57 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 D172_001110 89b970fbbd83c5492df68349184697a5 246 SUPERFAMILY SSF52402 23 206 6.28E-53 T 14-10-2018 D172_001110 89b970fbbd83c5492df68349184697a5 246 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 20 240 9.8E-88 T 14-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 D172_001110 89b970fbbd83c5492df68349184697a5 246 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 47 217 1.7E-52 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 D172_001110 89b970fbbd83c5492df68349184697a5 246 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 7 241 39.468 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 D172_001110 89b970fbbd83c5492df68349184697a5 246 Gene3D G3DSA:3.40.50.620 2 214 7.2E-63 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_001110 89b970fbbd83c5492df68349184697a5 246 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 31 240 4.7E-86 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 D172_007540 a6262fb3d34704e4650cd53ea8db96b6 313 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 D172_007540 a6262fb3d34704e4650cd53ea8db96b6 313 SUPERFAMILY SSF51569 2 312 4.71E-109 T 14-10-2018 D172_007540 a6262fb3d34704e4650cd53ea8db96b6 313 TIGRFAM TIGR00874 talAB: transaldolase 3 311 3.6E-146 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 D172_007540 a6262fb3d34704e4650cd53ea8db96b6 313 Hamap MF_00492 Transaldolase [tal]. 2 312 49.841 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 D172_007540 a6262fb3d34704e4650cd53ea8db96b6 313 Gene3D G3DSA:3.20.20.70 1 313 2.5E-134 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_007540 a6262fb3d34704e4650cd53ea8db96b6 313 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 305 1.8E-102 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 D172_007540 a6262fb3d34704e4650cd53ea8db96b6 313 ProSitePatterns PS00958 Transaldolase active site. 122 139 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 D172_008395 4f09dd60de28e13371546c6f0065e75e 73 Pfam PF10981 Protein of unknown function (DUF2788) 17 67 6.4E-20 T 14-10-2018 IPR021249 Protein of unknown function DUF2788 D172_017155 145b5c0a1625643e12cfe92a799eabf9 458 Pfam PF12146 Serine aminopeptidase, S33 125 244 6.8E-10 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 D172_017155 145b5c0a1625643e12cfe92a799eabf9 458 Gene3D G3DSA:3.40.50.1820 112 337 1.5E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_017155 145b5c0a1625643e12cfe92a799eabf9 458 SUPERFAMILY SSF53474 118 331 1.56E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_013010 f548d4a5b034bb67dcdd4fcc2151bd01 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 186 206 3.9E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_013010 f548d4a5b034bb67dcdd4fcc2151bd01 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 403 3.9E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_013010 f548d4a5b034bb67dcdd4fcc2151bd01 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 3.9E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_013010 f548d4a5b034bb67dcdd4fcc2151bd01 541 SUPERFAMILY SSF58104 232 540 4.45E-68 T 14-10-2018 D172_013010 f548d4a5b034bb67dcdd4fcc2151bd01 541 Gene3D G3DSA:1.10.287.950 212 541 2.0E-62 T 14-10-2018 D172_013010 f548d4a5b034bb67dcdd4fcc2151bd01 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 503 9.0E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_013010 f548d4a5b034bb67dcdd4fcc2151bd01 541 SMART SM00283 278 539 6.0E-65 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_011645 3370e8280a287a0cb83e3d8788834b76 310 Pfam PF00294 pfkB family carbohydrate kinase 1 297 1.3E-53 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB D172_011645 3370e8280a287a0cb83e3d8788834b76 310 SUPERFAMILY SSF53613 1 297 1.23E-67 T 14-10-2018 IPR029056 Ribokinase-like D172_011645 3370e8280a287a0cb83e3d8788834b76 310 Gene3D G3DSA:3.40.1190.20 1 304 1.0E-70 T 14-10-2018 IPR029056 Ribokinase-like D172_000975 30ca6800e036e0c2ab7162200caee200 204 Pfam PF03458 UPF0126 domain 94 164 4.3E-19 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 D172_000975 30ca6800e036e0c2ab7162200caee200 204 Pfam PF03458 UPF0126 domain 7 77 1.3E-22 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 D172_017450 2939f1345ccb4b3a398879c2dfbcee7a 448 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 445 3.8E-213 T 14-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 D172_017450 2939f1345ccb4b3a398879c2dfbcee7a 448 SUPERFAMILY SSF55909 3 445 1.96E-201 T 14-10-2018 D172_017450 2939f1345ccb4b3a398879c2dfbcee7a 448 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 446 58.874 T 14-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 D172_017450 2939f1345ccb4b3a398879c2dfbcee7a 448 Pfam PF04996 Succinylarginine dihydrolase 3 445 1.2E-215 T 14-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 D172_017450 2939f1345ccb4b3a398879c2dfbcee7a 448 Gene3D G3DSA:3.75.10.20 1 448 3.1E-203 T 14-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 D172_017845 8099a4c31426bed4b85c0cad418ce83f 372 Pfam PF01609 Transposase DDE domain 104 340 2.7E-21 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D172_017845 8099a4c31426bed4b85c0cad418ce83f 372 Pfam PF13808 DDE_Tnp_1-associated 8 94 4.3E-31 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal D172_018510 c722e1b8da4c4a5494f262febbb85725 276 Pfam PF10354 Domain of unknown function (DUF2431) 10 184 1.1E-29 T 14-10-2018 IPR019446 Domain of unknown function DUF2431 D172_008710 f4946559b55b4abe31f7c1d637d4a7c2 383 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 350 35.636 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 D172_008710 f4946559b55b4abe31f7c1d637d4a7c2 383 SUPERFAMILY SSF56059 92 298 5.83E-56 T 14-10-2018 D172_008710 f4946559b55b4abe31f7c1d637d4a7c2 383 Gene3D G3DSA:3.30.470.20 164 380 1.1E-73 T 14-10-2018 D172_008710 f4946559b55b4abe31f7c1d637d4a7c2 383 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 354 2.5E-103 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 D172_008710 f4946559b55b4abe31f7c1d637d4a7c2 383 Pfam PF02222 ATP-grasp domain 101 278 8.0E-52 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type D172_008710 f4946559b55b4abe31f7c1d637d4a7c2 383 SUPERFAMILY SSF52440 2 88 9.64E-16 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily D172_008710 f4946559b55b4abe31f7c1d637d4a7c2 383 Gene3D G3DSA:3.40.50.20 1 81 4.1E-18 T 14-10-2018 D172_008710 f4946559b55b4abe31f7c1d637d4a7c2 383 SUPERFAMILY SSF51246 303 373 1.26E-16 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 D172_008710 f4946559b55b4abe31f7c1d637d4a7c2 383 Gene3D G3DSA:3.30.1490.20 92 163 9.4E-20 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D172_015825 881aba47666cf3fc2c03b14aad81b51f 289 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 183 189 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D172_015825 881aba47666cf3fc2c03b14aad81b51f 289 TIGRFAM TIGR00571 dam: DNA adenine methylase 6 273 2.2E-88 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D172_015825 881aba47666cf3fc2c03b14aad81b51f 289 Gene3D G3DSA:3.40.50.150 8 244 2.9E-79 T 14-10-2018 D172_015825 881aba47666cf3fc2c03b14aad81b51f 289 Gene3D G3DSA:1.10.1020.10 62 161 2.9E-79 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 D172_015825 881aba47666cf3fc2c03b14aad81b51f 289 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 36 50 2.9E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D172_015825 881aba47666cf3fc2c03b14aad81b51f 289 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 11 27 2.9E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D172_015825 881aba47666cf3fc2c03b14aad81b51f 289 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 180 192 2.9E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D172_015825 881aba47666cf3fc2c03b14aad81b51f 289 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 55 68 2.9E-17 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D172_015825 881aba47666cf3fc2c03b14aad81b51f 289 SUPERFAMILY SSF53335 6 273 2.41E-71 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_015825 881aba47666cf3fc2c03b14aad81b51f 289 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 11 257 2.7E-64 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 D172_015825 881aba47666cf3fc2c03b14aad81b51f 289 PIRSF PIRSF000398 2 280 2.1E-64 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 SUPERFAMILY SSF82693 143 327 6.63E-18 T 14-10-2018 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 SUPERFAMILY SSF82714 699 783 4.32E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 Gene3D G3DSA:1.20.1640.10 505 1001 1.3E-259 T 14-10-2018 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 Pfam PF00873 AcrB/AcrD/AcrF family 7 1004 4.6E-236 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 Gene3D G3DSA:3.30.70.1430 559 648 1.3E-259 T 14-10-2018 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 SUPERFAMILY SSF82866 787 1009 1.03E-43 T 14-10-2018 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 SUPERFAMILY SSF82714 186 269 7.59E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 SUPERFAMILY SSF82693 45 135 9.94E-19 T 14-10-2018 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 Gene3D G3DSA:3.30.70.1320 137 329 1.3E-259 T 14-10-2018 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 Gene3D G3DSA:3.30.70.1430 43 794 1.3E-259 T 14-10-2018 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 Gene3D G3DSA:3.30.2090.10 698 786 1.3E-259 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 Gene3D G3DSA:3.30.2090.10 182 272 1.3E-259 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 Gene3D G3DSA:1.20.1640.10 13 504 1.3E-259 T 14-10-2018 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 Gene3D G3DSA:3.30.70.1440 649 843 1.3E-259 T 14-10-2018 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 SUPERFAMILY SSF82693 557 650 1.83E-8 T 14-10-2018 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 SUPERFAMILY SSF82866 297 492 1.31E-44 T 14-10-2018 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 PRINTS PR00702 Acriflavin resistance protein family signature 13 37 5.2E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 5.2E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 5.2E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 5.2E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 5.2E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 5.2E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_001455 3775b7f8d6118df1c5e303a21b664309 1030 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 5.2E-58 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_002155 246efe5f260defb9eaf2934ea4e45a47 326 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 6 322 2.4E-131 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 D172_002155 246efe5f260defb9eaf2934ea4e45a47 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 97 115 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 D172_002155 246efe5f260defb9eaf2934ea4e45a47 326 Gene3D G3DSA:1.10.1200.80 255 326 4.6E-6 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 D172_002155 246efe5f260defb9eaf2934ea4e45a47 326 PIRSF PIRSF006621 3 326 2.6E-105 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 D172_002155 246efe5f260defb9eaf2934ea4e45a47 326 Pfam PF01207 Dihydrouridine synthase (Dus) 16 321 7.7E-111 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 D172_002155 246efe5f260defb9eaf2934ea4e45a47 326 SUPERFAMILY SSF51395 13 321 9.16E-89 T 14-10-2018 D172_002155 246efe5f260defb9eaf2934ea4e45a47 326 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 4 324 50.308 T 14-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 D172_002155 246efe5f260defb9eaf2934ea4e45a47 326 Gene3D G3DSA:3.20.20.70 9 252 4.8E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_020305 88cb7f1805fe02b8a88c995f2997fc54 288 Gene3D G3DSA:3.40.190.290 91 288 8.2E-9 T 14-10-2018 D172_020305 88cb7f1805fe02b8a88c995f2997fc54 288 Gene3D G3DSA:1.10.10.10 2 85 1.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_020305 88cb7f1805fe02b8a88c995f2997fc54 288 Pfam PF03466 LysR substrate binding domain 89 287 9.4E-16 T 14-10-2018 IPR005119 LysR, substrate-binding D172_020305 88cb7f1805fe02b8a88c995f2997fc54 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 3.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020305 88cb7f1805fe02b8a88c995f2997fc54 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020305 88cb7f1805fe02b8a88c995f2997fc54 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020305 88cb7f1805fe02b8a88c995f2997fc54 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020305 88cb7f1805fe02b8a88c995f2997fc54 288 SUPERFAMILY SSF46785 3 85 6.67E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_020305 88cb7f1805fe02b8a88c995f2997fc54 288 SUPERFAMILY SSF53850 88 287 4.16E-15 T 14-10-2018 D172_002720 4c560e7651e6ce88c6c33e9eaf8b4959 148 Gene3D G3DSA:3.30.420.140 10 146 1.8E-41 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 D172_002720 4c560e7651e6ce88c6c33e9eaf8b4959 148 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 12 147 24.061 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 D172_002720 4c560e7651e6ce88c6c33e9eaf8b4959 148 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 15 144 5.6E-49 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 D172_002720 4c560e7651e6ce88c6c33e9eaf8b4959 148 SMART SM00732 12 112 1.2E-31 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 D172_002720 4c560e7651e6ce88c6c33e9eaf8b4959 148 SUPERFAMILY SSF53098 13 145 2.43E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_002720 4c560e7651e6ce88c6c33e9eaf8b4959 148 Pfam PF03652 Holliday junction resolvase 13 144 9.5E-40 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 D172_016955 4f1274984d68cf8ef526b2f9c732cba8 261 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 D172_016955 4f1274984d68cf8ef526b2f9c732cba8 261 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 D172_016955 4f1274984d68cf8ef526b2f9c732cba8 261 Pfam PF01026 TatD related DNase 6 256 2.7E-72 T 14-10-2018 IPR001130 TatD family GO:0016788 D172_016955 4f1274984d68cf8ef526b2f9c732cba8 261 Gene3D G3DSA:3.20.20.140 3 261 6.6E-99 T 14-10-2018 D172_016955 4f1274984d68cf8ef526b2f9c732cba8 261 PIRSF PIRSF005902 1 261 1.7E-76 T 14-10-2018 IPR001130 TatD family GO:0016788 D172_016955 4f1274984d68cf8ef526b2f9c732cba8 261 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 5 257 6.4E-68 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 D172_016955 4f1274984d68cf8ef526b2f9c732cba8 261 SUPERFAMILY SSF51556 5 258 5.45E-82 T 14-10-2018 IPR032466 Metal-dependent hydrolase D172_000955 958391b3af2a92702a3f19935193b7df 267 Gene3D G3DSA:3.40.190.80 151 251 3.1E-26 T 14-10-2018 D172_000955 958391b3af2a92702a3f19935193b7df 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 204 228 3.0E-5 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D172_000955 958391b3af2a92702a3f19935193b7df 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 3.0E-5 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D172_000955 958391b3af2a92702a3f19935193b7df 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 3.0E-5 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D172_000955 958391b3af2a92702a3f19935193b7df 267 Pfam PF00459 Inositol monophosphatase family 5 242 8.1E-48 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 D172_000955 958391b3af2a92702a3f19935193b7df 267 Gene3D G3DSA:3.30.540.10 1 150 1.9E-41 T 14-10-2018 D172_000955 958391b3af2a92702a3f19935193b7df 267 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 4 249 37.627 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 D172_000955 958391b3af2a92702a3f19935193b7df 267 SUPERFAMILY SSF56655 2 257 3.14E-69 T 14-10-2018 D172_000955 958391b3af2a92702a3f19935193b7df 267 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 7 247 7.4E-84 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 D172_015865 b99d62ffcbbb57a4286a0561568809c2 359 SMART SM00842 13 180 1.4E-4 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 D172_015865 b99d62ffcbbb57a4286a0561568809c2 359 Gene3D G3DSA:3.30.420.40 187 318 2.6E-77 T 14-10-2018 D172_015865 b99d62ffcbbb57a4286a0561568809c2 359 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 12 354 6.2E-100 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM D172_015865 b99d62ffcbbb57a4286a0561568809c2 359 PIRSF PIRSF019169 1 355 2.7E-115 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM D172_015865 b99d62ffcbbb57a4286a0561568809c2 359 Pfam PF11104 Type IV pilus assembly protein PilM; 15 354 2.5E-139 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM D172_015865 b99d62ffcbbb57a4286a0561568809c2 359 SUPERFAMILY SSF53067 193 353 2.28E-24 T 14-10-2018 D172_015865 b99d62ffcbbb57a4286a0561568809c2 359 Gene3D G3DSA:3.30.1490.300 89 148 2.6E-77 T 14-10-2018 D172_015865 b99d62ffcbbb57a4286a0561568809c2 359 Gene3D G3DSA:3.30.420.40 14 352 2.6E-77 T 14-10-2018 D172_015865 b99d62ffcbbb57a4286a0561568809c2 359 SUPERFAMILY SSF53067 12 179 5.27E-14 T 14-10-2018 D172_004065 7548f1d4f30bfd518f13d5a2c67923ec 264 SUPERFAMILY SSF46689 215 258 2.06E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_004065 7548f1d4f30bfd518f13d5a2c67923ec 264 Pfam PF02311 AraC-like ligand binding domain 23 86 1.8E-5 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 D172_004065 7548f1d4f30bfd518f13d5a2c67923ec 264 SUPERFAMILY SSF46689 158 209 9.86E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_004065 7548f1d4f30bfd518f13d5a2c67923ec 264 SUPERFAMILY SSF51182 23 91 1.1E-9 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily D172_004065 7548f1d4f30bfd518f13d5a2c67923ec 264 Gene3D G3DSA:2.60.120.10 12 105 1.7E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_004065 7548f1d4f30bfd518f13d5a2c67923ec 264 Pfam PF12833 Helix-turn-helix domain 180 256 1.4E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_004065 7548f1d4f30bfd518f13d5a2c67923ec 264 Gene3D G3DSA:1.10.10.60 155 260 4.3E-18 T 14-10-2018 D172_004065 7548f1d4f30bfd518f13d5a2c67923ec 264 SMART SM00342 174 256 7.0E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_010265 2e2dcc46b20cbada841f8b6d731acf4e 268 Gene3D G3DSA:1.10.530.10 128 267 2.3E-12 T 14-10-2018 D172_010265 2e2dcc46b20cbada841f8b6d731acf4e 268 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 131 263 5.9E-16 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 D172_016245 2ea57ee39ca1deba89c1899da632c371 130 Gene3D G3DSA:3.30.1490.10 73 129 1.5E-22 T 14-10-2018 D172_016245 2ea57ee39ca1deba89c1899da632c371 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.492 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016245 2ea57ee39ca1deba89c1899da632c371 130 Pfam PF00410 Ribosomal protein S8 5 129 3.7E-46 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016245 2ea57ee39ca1deba89c1899da632c371 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016245 2ea57ee39ca1deba89c1899da632c371 130 Gene3D G3DSA:3.30.1370.30 2 72 4.7E-25 T 14-10-2018 D172_016245 2ea57ee39ca1deba89c1899da632c371 130 SUPERFAMILY SSF56047 5 129 1.03E-43 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_020480 7b43fa2c9679213926cd94a963358c26 130 SUPERFAMILY SSF158682 18 126 2.49E-8 T 14-10-2018 IPR029024 TerB-like D172_020480 7b43fa2c9679213926cd94a963358c26 130 Gene3D G3DSA:1.10.3680.10 12 128 2.8E-6 T 14-10-2018 IPR029024 TerB-like D172_000575 a22f9391f415f200f29514a5564d1760 392 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 372 1.1E-36 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D172_000575 a22f9391f415f200f29514a5564d1760 392 Gene3D G3DSA:1.10.287.470 105 179 4.2E-47 T 14-10-2018 D172_000575 a22f9391f415f200f29514a5564d1760 392 Gene3D G3DSA:2.40.420.20 306 370 4.2E-47 T 14-10-2018 D172_000575 a22f9391f415f200f29514a5564d1760 392 SUPERFAMILY SSF111369 59 254 2.35E-19 T 14-10-2018 D172_000575 a22f9391f415f200f29514a5564d1760 392 Pfam PF13437 HlyD family secretion protein 72 150 1.2E-5 T 14-10-2018 D172_000575 a22f9391f415f200f29514a5564d1760 392 Pfam PF13437 HlyD family secretion protein 183 292 8.4E-7 T 14-10-2018 D172_000575 a22f9391f415f200f29514a5564d1760 392 Gene3D G3DSA:2.40.30.170 59 305 4.2E-47 T 14-10-2018 D172_000575 a22f9391f415f200f29514a5564d1760 392 Gene3D G3DSA:2.40.50.100 68 213 4.2E-47 T 14-10-2018 D172_016255 7f758559d91b4bcf30e1c37fb6cd078e 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 4.8E-42 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016255 7f758559d91b4bcf30e1c37fb6cd078e 179 Pfam PF00281 Ribosomal protein L5 24 80 1.2E-27 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016255 7f758559d91b4bcf30e1c37fb6cd078e 179 PIRSF PIRSF002161 1 179 6.8E-65 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016255 7f758559d91b4bcf30e1c37fb6cd078e 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.793 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_016255 7f758559d91b4bcf30e1c37fb6cd078e 179 SUPERFAMILY SSF55282 1 178 9.42E-78 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016255 7f758559d91b4bcf30e1c37fb6cd078e 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016255 7f758559d91b4bcf30e1c37fb6cd078e 179 Gene3D G3DSA:3.30.1440.10 1 179 4.0E-81 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_003165 d4eec234d785f9cd3fd568a79c6887d4 352 SUPERFAMILY SSF52540 119 340 1.5E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_003165 d4eec234d785f9cd3fd568a79c6887d4 352 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 80 338 9.5E-82 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 D172_003165 d4eec234d785f9cd3fd568a79c6887d4 352 Gene3D G3DSA:2.40.50.140 42 107 2.8E-19 T 14-10-2018 D172_003165 d4eec234d785f9cd3fd568a79c6887d4 352 Gene3D G3DSA:3.40.50.300 108 279 2.0E-50 T 14-10-2018 D172_003165 d4eec234d785f9cd3fd568a79c6887d4 352 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 47 344 36.319 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 D172_003165 d4eec234d785f9cd3fd568a79c6887d4 352 Gene3D G3DSA:1.10.40.50 280 348 3.8E-23 T 14-10-2018 D172_003165 d4eec234d785f9cd3fd568a79c6887d4 352 Pfam PF03193 RsgA GTPase 106 280 1.0E-54 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 Pfam PF00072 Response regulator receiver domain 1031 1142 3.3E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 SMART SM00448 1029 1142 4.7E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 PRINTS PR00344 Bacterial sensor protein C-terminal signature 993 1006 4.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 PRINTS PR00344 Bacterial sensor protein C-terminal signature 955 965 4.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 PRINTS PR00344 Bacterial sensor protein C-terminal signature 937 951 4.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 PRINTS PR00344 Bacterial sensor protein C-terminal signature 969 987 4.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 SUPERFAMILY SSF55785 609 731 3.62E-10 T 14-10-2018 IPR035965 PAS domain superfamily D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 SMART SM00388 792 857 1.2E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 Gene3D G3DSA:1.20.1730.10 37 514 2.5E-15 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 Gene3D G3DSA:3.30.450.20 606 738 1.9E-12 T 14-10-2018 D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 SUPERFAMILY SSF52172 1029 1144 1.08E-20 T 14-10-2018 IPR011006 CheY-like superfamily D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 902 1007 3.3E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 Gene3D G3DSA:3.40.50.2300 1026 1146 3.1E-22 T 14-10-2018 D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 Pfam PF00512 His Kinase A (phospho-acceptor) domain 792 857 4.3E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 Pfam PF12860 PAS fold 624 737 1.7E-42 T 14-10-2018 D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 SUPERFAMILY SSF55874 848 1007 4.19E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 SMART SM00387 901 1009 3.9E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 SUPERFAMILY SSF47384 777 857 1.39E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 Gene3D G3DSA:1.10.287.130 755 855 3.5E-12 T 14-10-2018 D172_014505 7646bcc01f98ae4b481e3a3ecc13cdd4 1146 Gene3D G3DSA:3.30.565.10 862 1007 2.6E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_014880 2159bd79ff2776a975a58e3a3809f188 857 Gene3D G3DSA:1.10.390.60 217 456 2.4E-78 T 14-10-2018 D172_014880 2159bd79ff2776a975a58e3a3809f188 857 Pfam PF01433 Peptidase family M1 domain 223 450 2.3E-74 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_014880 2159bd79ff2776a975a58e3a3809f188 857 Gene3D G3DSA:2.60.40.1910 457 538 5.3E-10 T 14-10-2018 D172_014880 2159bd79ff2776a975a58e3a3809f188 857 SUPERFAMILY SSF55486 219 463 5.27E-71 T 14-10-2018 D172_014880 2159bd79ff2776a975a58e3a3809f188 857 SUPERFAMILY SSF63737 26 211 2.35E-42 T 14-10-2018 D172_014880 2159bd79ff2776a975a58e3a3809f188 857 Gene3D G3DSA:2.60.40.1730 12 212 1.1E-44 T 14-10-2018 D172_014880 2159bd79ff2776a975a58e3a3809f188 857 Pfam PF11838 ERAP1-like C-terminal domain 524 833 3.1E-46 T 14-10-2018 IPR024571 ERAP1-like C-terminal domain D172_014880 2159bd79ff2776a975a58e3a3809f188 857 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 147 162 7.1E-25 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_014880 2159bd79ff2776a975a58e3a3809f188 857 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 271 281 7.1E-25 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_014880 2159bd79ff2776a975a58e3a3809f188 857 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 307 322 7.1E-25 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_014880 2159bd79ff2776a975a58e3a3809f188 857 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 326 338 7.1E-25 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_014880 2159bd79ff2776a975a58e3a3809f188 857 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 194 209 7.1E-25 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_014880 2159bd79ff2776a975a58e3a3809f188 857 Gene3D G3DSA:1.25.50.20 543 857 8.9E-27 T 14-10-2018 D172_000215 98fb0e8d4a8894a41e94948e3ad41def 206 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 205 3.2E-55 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 D172_000215 98fb0e8d4a8894a41e94948e3ad41def 206 Gene3D G3DSA:3.40.50.150 2 206 2.5E-68 T 14-10-2018 D172_000215 98fb0e8d4a8894a41e94948e3ad41def 206 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 202 28.061 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 D172_000215 98fb0e8d4a8894a41e94948e3ad41def 206 Pfam PF02527 rRNA small subunit methyltransferase G 21 201 1.9E-60 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 D172_000215 98fb0e8d4a8894a41e94948e3ad41def 206 PIRSF PIRSF003078 2 206 1.3E-59 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 D172_000215 98fb0e8d4a8894a41e94948e3ad41def 206 SUPERFAMILY SSF53335 3 205 1.48E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_011450 038987997703abdd16e78873f23f9bb4 226 Gene3D G3DSA:3.40.50.150 1 174 8.9E-46 T 14-10-2018 D172_011450 038987997703abdd16e78873f23f9bb4 226 SUPERFAMILY SSF53335 16 144 5.46E-7 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_011450 038987997703abdd16e78873f23f9bb4 226 PIRSF PIRSF028234 1 226 3.4E-65 T 14-10-2018 IPR016876 Uncharacterised conserved protein UCP028234 D172_011450 038987997703abdd16e78873f23f9bb4 226 Pfam PF12847 Methyltransferase domain 3 166 1.3E-28 T 14-10-2018 D172_004620 8326fca38b587f332fc54023272821bf 350 Gene3D G3DSA:3.30.2340.10 163 290 3.8E-100 T 14-10-2018 D172_004620 8326fca38b587f332fc54023272821bf 350 Gene3D G3DSA:3.30.2350.20 14 326 3.8E-100 T 14-10-2018 D172_004620 8326fca38b587f332fc54023272821bf 350 SUPERFAMILY SSF55120 4 329 1.44E-81 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_004620 8326fca38b587f332fc54023272821bf 350 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 182 326 3.9E-13 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_004620 8326fca38b587f332fc54023272821bf 350 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 6 163 1.4E-35 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_004620 8326fca38b587f332fc54023272821bf 350 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 2 331 26.429 T 14-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_005940 96bbc39e77cef2e30b6f19d4c9a303e4 88 Pfam PF01527 Transposase 2 71 8.8E-20 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_005940 96bbc39e77cef2e30b6f19d4c9a303e4 88 SUPERFAMILY SSF46689 1 71 3.4E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_012515 96bbc39e77cef2e30b6f19d4c9a303e4 88 Pfam PF01527 Transposase 2 71 8.8E-20 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_012515 96bbc39e77cef2e30b6f19d4c9a303e4 88 SUPERFAMILY SSF46689 1 71 3.4E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_011615 96bbc39e77cef2e30b6f19d4c9a303e4 88 Pfam PF01527 Transposase 2 71 8.8E-20 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_011615 96bbc39e77cef2e30b6f19d4c9a303e4 88 SUPERFAMILY SSF46689 1 71 3.4E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_006570 96bbc39e77cef2e30b6f19d4c9a303e4 88 Pfam PF01527 Transposase 2 71 8.8E-20 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_006570 96bbc39e77cef2e30b6f19d4c9a303e4 88 SUPERFAMILY SSF46689 1 71 3.4E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_017385 96bbc39e77cef2e30b6f19d4c9a303e4 88 Pfam PF01527 Transposase 2 71 8.8E-20 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_017385 96bbc39e77cef2e30b6f19d4c9a303e4 88 SUPERFAMILY SSF46689 1 71 3.4E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_020730 96bbc39e77cef2e30b6f19d4c9a303e4 88 Pfam PF01527 Transposase 2 71 8.8E-20 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_020730 96bbc39e77cef2e30b6f19d4c9a303e4 88 SUPERFAMILY SSF46689 1 71 3.4E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_019805 ba3c79f31acd07564dacf58852f24649 427 Pfam PF00999 Sodium/hydrogen exchanger family 31 416 7.3E-45 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 D172_001495 ec0a4a65f828c5a50d7282b51d99500f 225 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 18 214 4.9E-21 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 D172_001495 ec0a4a65f828c5a50d7282b51d99500f 225 Gene3D G3DSA:3.20.20.70 1 218 5.1E-43 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_001495 ec0a4a65f828c5a50d7282b51d99500f 225 SUPERFAMILY SSF51366 4 216 1.73E-35 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D172_001495 ec0a4a65f828c5a50d7282b51d99500f 225 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 9 219 22.905 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 D172_016915 09c55d99d914192e1940b179cef47e53 328 SUPERFAMILY SSF55073 174 325 3.06E-22 T 14-10-2018 IPR029787 Nucleotide cyclase D172_016915 09c55d99d914192e1940b179cef47e53 328 Gene3D G3DSA:3.30.70.270 154 326 2.9E-26 T 14-10-2018 D172_016915 09c55d99d914192e1940b179cef47e53 328 SMART SM00267 157 327 1.8E-14 T 14-10-2018 IPR000160 GGDEF domain D172_016915 09c55d99d914192e1940b179cef47e53 328 Pfam PF00990 Diguanylate cyclase, GGDEF domain 170 321 3.0E-21 T 14-10-2018 IPR000160 GGDEF domain D172_016915 09c55d99d914192e1940b179cef47e53 328 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 165 322 2.8E-20 T 14-10-2018 IPR000160 GGDEF domain D172_004745 86930ba000b53e65417278e4bc04e70c 902 SUPERFAMILY SSF88713 505 755 8.06E-10 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 D172_004745 86930ba000b53e65417278e4bc04e70c 902 Pfam PF03537 Glycoside-hydrolase family GH114 51 251 4.4E-9 T 14-10-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain D172_004745 86930ba000b53e65417278e4bc04e70c 902 Gene3D G3DSA:3.20.20.370 503 758 1.3E-6 T 14-10-2018 D172_004745 86930ba000b53e65417278e4bc04e70c 902 Gene3D G3DSA:3.20.20.70 34 265 3.9E-15 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_004745 86930ba000b53e65417278e4bc04e70c 902 SUPERFAMILY SSF51445 26 260 2.11E-24 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_006950 c753fca7a4eb3176914a60b4019bd178 358 Gene3D G3DSA:3.55.50.30 279 354 1.4E-6 T 14-10-2018 D172_006950 c753fca7a4eb3176914a60b4019bd178 358 Pfam PF04773 FecR protein 123 215 9.9E-19 T 14-10-2018 IPR006860 FecR protein D172_006950 c753fca7a4eb3176914a60b4019bd178 358 Pfam PF16344 Domain of unknown function (DUF4974) 252 343 1.7E-7 T 14-10-2018 IPR032508 Protein FecR, C-terminal D172_006950 c753fca7a4eb3176914a60b4019bd178 358 PIRSF PIRSF018266 6 355 3.7E-58 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component D172_006950 c753fca7a4eb3176914a60b4019bd178 358 Gene3D G3DSA:2.60.120.1440 102 253 2.5E-24 T 14-10-2018 D172_013525 6d81bbdfdafb046ae83c96c0e80d9c25 247 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 1.7E-28 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G D172_013525 6d81bbdfdafb046ae83c96c0e80d9c25 247 SUPERFAMILY SSF117143 77 205 7.85E-15 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like D172_013525 6d81bbdfdafb046ae83c96c0e80d9c25 247 Pfam PF00460 Flagella basal body rod protein 6 35 4.8E-6 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 D172_013525 6d81bbdfdafb046ae83c96c0e80d9c25 247 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 240 1.5E-22 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D172_000700 9fe96207ff30e5301299d6016f900d91 402 Pfam PF05569 BlaR1 peptidase M56 77 265 1.5E-35 T 14-10-2018 IPR008756 Peptidase M56 D172_000700 9fe96207ff30e5301299d6016f900d91 402 Gene3D G3DSA:3.30.2420.10 304 391 2.3E-23 T 14-10-2018 D172_000700 9fe96207ff30e5301299d6016f900d91 402 PRINTS PR01374 Gram-negative bacterial tonB protein signature 347 364 4.8E-13 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_000700 9fe96207ff30e5301299d6016f900d91 402 PRINTS PR01374 Gram-negative bacterial tonB protein signature 328 346 4.8E-13 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_000700 9fe96207ff30e5301299d6016f900d91 402 PRINTS PR01374 Gram-negative bacterial tonB protein signature 307 328 4.8E-13 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_000700 9fe96207ff30e5301299d6016f900d91 402 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 312 385 5.2E-18 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 D172_000700 9fe96207ff30e5301299d6016f900d91 402 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 315 383 1.6E-15 T 14-10-2018 IPR006260 TonB/TolA, C-terminal D172_000700 9fe96207ff30e5301299d6016f900d91 402 SUPERFAMILY SSF74653 306 380 2.62E-19 T 14-10-2018 D172_008690 7f1d90f5ca5712466a07e0a6788caf07 293 Gene3D G3DSA:3.40.50.1820 31 292 1.1E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_008690 7f1d90f5ca5712466a07e0a6788caf07 293 SUPERFAMILY SSF53474 33 284 2.65E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_008690 7f1d90f5ca5712466a07e0a6788caf07 293 Pfam PF00756 Putative esterase 44 269 9.7E-21 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 D172_014940 10746b98bd1e3ef2eae4aca31784cbf4 358 SUPERFAMILY SSF53756 3 355 2.47E-116 T 14-10-2018 D172_014940 10746b98bd1e3ef2eae4aca31784cbf4 358 Gene3D G3DSA:3.40.50.2000 1 176 1.0E-66 T 14-10-2018 D172_014940 10746b98bd1e3ef2eae4aca31784cbf4 358 Gene3D G3DSA:3.40.50.2000 177 337 2.3E-46 T 14-10-2018 D172_014940 10746b98bd1e3ef2eae4aca31784cbf4 358 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 347 1.7E-102 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_014940 10746b98bd1e3ef2eae4aca31784cbf4 358 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 180 339 9.0E-38 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 D172_014940 10746b98bd1e3ef2eae4aca31784cbf4 358 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 354 35.818 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_014940 10746b98bd1e3ef2eae4aca31784cbf4 358 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 142 8.2E-45 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_002865 9f1ed583021c5d48844d7c9d2bffa123 307 SUPERFAMILY SSF103481 43 145 3.92E-13 T 14-10-2018 D172_002865 9f1ed583021c5d48844d7c9d2bffa123 307 Pfam PF00892 EamA-like transporter family 9 143 1.4E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_002865 9f1ed583021c5d48844d7c9d2bffa123 307 SUPERFAMILY SSF103481 185 290 1.7E-9 T 14-10-2018 D172_002865 9f1ed583021c5d48844d7c9d2bffa123 307 TIGRFAM TIGR00688 rarD: protein RarD 9 262 5.4E-82 T 14-10-2018 IPR004626 RarD protein GO:0005887 D172_005170 ddb4d175267c7e6762a039935e640f33 495 Pfam PF07687 Peptidase dimerisation domain 279 359 6.6E-6 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain D172_005170 ddb4d175267c7e6762a039935e640f33 495 Gene3D G3DSA:3.30.70.360 207 404 1.2E-96 T 14-10-2018 D172_005170 ddb4d175267c7e6762a039935e640f33 495 Gene3D G3DSA:3.40.630.10 40 492 1.2E-96 T 14-10-2018 D172_005170 ddb4d175267c7e6762a039935e640f33 495 Gene3D G3DSA:3.30.70.360 225 312 1.2E-96 T 14-10-2018 D172_005170 ddb4d175267c7e6762a039935e640f33 495 SUPERFAMILY SSF53187 31 494 5.71E-45 T 14-10-2018 D172_005170 ddb4d175267c7e6762a039935e640f33 495 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 43 486 6.4E-78 T 14-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 D172_005170 ddb4d175267c7e6762a039935e640f33 495 SUPERFAMILY SSF55031 207 399 1.21E-42 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain D172_005170 ddb4d175267c7e6762a039935e640f33 495 Pfam PF01546 Peptidase family M20/M25/M40 105 489 9.2E-24 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 D172_015280 3bcecb2666ff7908f2ab75db670b9aae 161 Gene3D G3DSA:2.160.10.10 11 161 2.5E-38 T 14-10-2018 D172_015280 3bcecb2666ff7908f2ab75db670b9aae 161 SUPERFAMILY SSF51161 39 159 9.29E-35 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily D172_015280 3bcecb2666ff7908f2ab75db670b9aae 161 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 107 141 8.1E-11 T 14-10-2018 IPR001451 Hexapeptide repeat D172_015280 3bcecb2666ff7908f2ab75db670b9aae 161 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 49 84 0.0027 T 14-10-2018 IPR001451 Hexapeptide repeat D172_016010 1c1689593b116ed87eaf2e04ab0ba59e 177 Pfam PF04751 Protein of unknown function (DUF615) 17 170 3.4E-46 T 14-10-2018 IPR006839 Ribosome-associated, YjgA D172_016010 1c1689593b116ed87eaf2e04ab0ba59e 177 Gene3D G3DSA:1.10.60.30 107 175 7.4E-23 T 14-10-2018 D172_016010 1c1689593b116ed87eaf2e04ab0ba59e 177 Gene3D G3DSA:1.10.60.30 27 104 4.2E-14 T 14-10-2018 D172_016010 1c1689593b116ed87eaf2e04ab0ba59e 177 SUPERFAMILY SSF158710 28 173 1.28E-42 T 14-10-2018 IPR023153 PSPTO4464-like domain superfamily D172_016010 1c1689593b116ed87eaf2e04ab0ba59e 177 PIRSF PIRSF016183 1 176 3.8E-48 T 14-10-2018 IPR006839 Ribosome-associated, YjgA D172_010035 573c43fc46ec8affa564f8918f177e1f 194 SUPERFAMILY SSF51283 1 191 3.01E-57 T 14-10-2018 IPR036157 dUTPase-like superfamily D172_010035 573c43fc46ec8affa564f8918f177e1f 194 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 4.8E-66 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 D172_010035 573c43fc46ec8affa564f8918f177e1f 194 Gene3D G3DSA:2.70.40.10 1 194 1.4E-50 T 14-10-2018 IPR036157 dUTPase-like superfamily D172_010035 573c43fc46ec8affa564f8918f177e1f 194 Pfam PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) 3 139 2.1E-7 T 14-10-2018 IPR010550 Deoxycytidine triphosphate deaminase, bacterial GO:0008829|GO:0009394 D172_010035 573c43fc46ec8affa564f8918f177e1f 194 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 32.918 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 D172_001420 7354528426de1fb33d19e8c327b2e6cb 338 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 334 1.5E-148 T 14-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 D172_001420 7354528426de1fb33d19e8c327b2e6cb 338 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 335 5.9E-143 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 D172_001420 7354528426de1fb33d19e8c327b2e6cb 338 Gene3D G3DSA:3.40.630.30 1 273 1.3E-123 T 14-10-2018 D172_001420 7354528426de1fb33d19e8c327b2e6cb 338 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 335 1.8E-146 T 14-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 D172_001420 7354528426de1fb33d19e8c327b2e6cb 338 Gene3D G3DSA:2.40.40.20 276 338 8.0E-6 T 14-10-2018 D172_001420 7354528426de1fb33d19e8c327b2e6cb 338 SUPERFAMILY SSF55729 1 335 6.93E-138 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_018310 ed340e05fc8af38c0c8191a189361c27 495 SMART SM00858 11 82 2.6E-12 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 D172_018310 ed340e05fc8af38c0c8191a189361c27 495 Gene3D G3DSA:3.90.1210.30 4 85 4.8E-27 T 14-10-2018 D172_018310 ed340e05fc8af38c0c8191a189361c27 495 Pfam PF08666 SAF domain 11 81 7.8E-10 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 D172_018310 ed340e05fc8af38c0c8191a189361c27 495 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 110 494 4.3E-150 T 14-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 D172_013475 3f25597d870ab7efcecb8818d8e78c04 140 SUPERFAMILY SSF160214 46 139 1.83E-26 T 14-10-2018 IPR035924 FlaG-like superfamily D172_013475 3f25597d870ab7efcecb8818d8e78c04 140 Pfam PF03646 FlaG protein 41 138 1.0E-27 T 14-10-2018 IPR005186 FlaG protein D172_013475 3f25597d870ab7efcecb8818d8e78c04 140 Gene3D G3DSA:3.30.160.170 36 136 1.9E-18 T 14-10-2018 IPR035924 FlaG-like superfamily D172_008555 f02c96b7a887aee23d2e0796032bdc79 383 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 D172_008555 f02c96b7a887aee23d2e0796032bdc79 383 Gene3D G3DSA:3.40.640.10 50 286 1.2E-115 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_008555 f02c96b7a887aee23d2e0796032bdc79 383 Gene3D G3DSA:3.90.1150.10 33 375 1.2E-115 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_008555 f02c96b7a887aee23d2e0796032bdc79 383 Pfam PF00155 Aminotransferase class I and II 40 378 2.1E-53 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D172_008555 f02c96b7a887aee23d2e0796032bdc79 383 SUPERFAMILY SSF53383 3 379 2.45E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_011030 8f06bb5d6fb0f8f7017351aa0a466a27 245 Pfam PF00849 RNA pseudouridylate synthase 41 195 1.1E-25 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_011030 8f06bb5d6fb0f8f7017351aa0a466a27 245 SUPERFAMILY SSF55120 32 243 3.68E-52 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_011030 8f06bb5d6fb0f8f7017351aa0a466a27 245 Gene3D G3DSA:3.30.2350.10 24 244 1.6E-59 T 14-10-2018 D172_009720 f8058a6de90f9a657c8e49ed5b67132b 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 79 157 2.7E-7 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 D172_009720 f8058a6de90f9a657c8e49ed5b67132b 158 Gene3D G3DSA:3.10.50.30 75 158 9.3E-7 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 D172_009720 f8058a6de90f9a657c8e49ed5b67132b 158 PIRSF PIRSF006092 2 158 5.8E-8 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 D172_009720 f8058a6de90f9a657c8e49ed5b67132b 158 SUPERFAMILY SSF54534 79 157 7.72E-9 T 14-10-2018 D172_013985 306d6c1d500709fe75260d35d2677d58 541 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 66 441 7.0E-48 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 D172_013985 306d6c1d500709fe75260d35d2677d58 541 Gene3D G3DSA:3.90.1150.170 57 523 5.3E-103 T 14-10-2018 D172_013985 306d6c1d500709fe75260d35d2677d58 541 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 526 5.2E-292 T 14-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 D172_013985 306d6c1d500709fe75260d35d2677d58 541 Gene3D G3DSA:3.40.640.10 121 386 5.3E-103 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_013985 306d6c1d500709fe75260d35d2677d58 541 SUPERFAMILY SSF53383 24 528 8.11E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_000910 a7f21757e35153d51e22b46ef585d50e 721 Gene3D G3DSA:3.40.50.300 10 271 1.1E-97 T 14-10-2018 D172_000910 a7f21757e35153d51e22b46ef585d50e 721 SUPERFAMILY SSF52540 5 640 1.57E-174 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_000910 a7f21757e35153d51e22b46ef585d50e 721 Gene3D G3DSA:1.10.486.10 380 536 1.3E-128 T 14-10-2018 D172_000910 a7f21757e35153d51e22b46ef585d50e 721 Pfam PF13361 UvrD-like helicase C-terminal domain 275 614 1.4E-76 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 D172_000910 a7f21757e35153d51e22b46ef585d50e 721 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 719 0.0 T 14-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 D172_000910 a7f21757e35153d51e22b46ef585d50e 721 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 270 9.7E-74 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 D172_000910 a7f21757e35153d51e22b46ef585d50e 721 Gene3D G3DSA:1.10.10.160 114 186 1.1E-97 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily D172_000910 a7f21757e35153d51e22b46ef585d50e 721 Gene3D G3DSA:3.40.50.300 279 634 1.3E-128 T 14-10-2018 D172_002990 9cbe59d3e93b5767a0dee120cb4c1199 296 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 296 31.998 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 D172_002990 9cbe59d3e93b5767a0dee120cb4c1199 296 Pfam PF00472 RF-1 domain 159 268 1.3E-40 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 D172_002990 9cbe59d3e93b5767a0dee120cb4c1199 296 Gene3D G3DSA:3.30.160.20 157 252 2.9E-95 T 14-10-2018 D172_002990 9cbe59d3e93b5767a0dee120cb4c1199 296 Pfam PF03462 PCRF domain 8 150 7.1E-45 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 D172_002990 9cbe59d3e93b5767a0dee120cb4c1199 296 SMART SM00937 16 126 9.0E-54 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 D172_002990 9cbe59d3e93b5767a0dee120cb4c1199 296 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 176 192 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 D172_002990 9cbe59d3e93b5767a0dee120cb4c1199 296 Gene3D G3DSA:3.30.70.1660 61 289 2.9E-95 T 14-10-2018 D172_002990 9cbe59d3e93b5767a0dee120cb4c1199 296 SUPERFAMILY SSF75620 6 295 9.94E-120 T 14-10-2018 D172_002990 9cbe59d3e93b5767a0dee120cb4c1199 296 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 294 6.5E-145 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 D172_002990 9cbe59d3e93b5767a0dee120cb4c1199 296 Gene3D G3DSA:1.20.58.410 1 47 2.6E-8 T 14-10-2018 D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 Gene3D G3DSA:2.60.40.10 132 226 6.4E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 Gene3D G3DSA:2.60.40.10 232 330 2.2E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 Pfam PF00801 PKD domain 44 115 3.4E-7 T 14-10-2018 IPR000601 PKD domain D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 SUPERFAMILY SSF49299 139 220 1.7E-5 T 14-10-2018 IPR035986 PKD domain superfamily D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 SUPERFAMILY SSF49299 227 322 1.96E-8 T 14-10-2018 IPR035986 PKD domain superfamily D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 SUPERFAMILY SSF49299 325 416 2.09E-7 T 14-10-2018 IPR035986 PKD domain superfamily D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 Gene3D G3DSA:2.60.40.10 30 131 3.4E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 SUPERFAMILY SSF49299 510 604 9.81E-7 T 14-10-2018 IPR035986 PKD domain superfamily D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 SMART SM00089 514 605 0.14 T 14-10-2018 IPR022409 PKD/Chitinase domain D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 SMART SM00089 229 323 0.38 T 14-10-2018 IPR022409 PKD/Chitinase domain D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 SMART SM00089 422 508 0.52 T 14-10-2018 IPR022409 PKD/Chitinase domain D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 SMART SM00089 134 224 2.0 T 14-10-2018 IPR022409 PKD/Chitinase domain D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 SMART SM00089 39 130 2.2E-5 T 14-10-2018 IPR022409 PKD/Chitinase domain D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 SMART SM00089 328 418 2.0 T 14-10-2018 IPR022409 PKD/Chitinase domain D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 SUPERFAMILY SSF49299 35 128 4.32E-7 T 14-10-2018 IPR035986 PKD domain superfamily D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 Gene3D G3DSA:2.60.40.10 334 415 1.3E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 Gene3D G3DSA:2.60.40.10 522 603 6.5E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_000490 682d54a75b55e9b1b922a688ed0fc89e 798 Gene3D G3DSA:2.60.40.10 428 507 4.7E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_010350 32af1427d69fb089595babc911dfba39 167 Pfam PF06127 Protein of unknown function (DUF962) 1 146 1.8E-23 T 14-10-2018 IPR009305 Protein of unknown function DUF962 D172_003570 9b6b16becee6cfaac9a78114c28a6203 662 Pfam PF13175 AAA ATPase domain 1 370 3.9E-55 T 14-10-2018 D172_003570 9b6b16becee6cfaac9a78114c28a6203 662 SUPERFAMILY SSF52540 1 373 6.68E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_003570 9b6b16becee6cfaac9a78114c28a6203 662 Gene3D G3DSA:3.40.50.300 1 378 2.1E-15 T 14-10-2018 D172_012045 39e1efda19db8681a748400bffe4062f 152 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 146 22.338 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 D172_012045 39e1efda19db8681a748400bffe4062f 152 Pfam PF02130 Uncharacterized protein family UPF0054 19 142 1.7E-34 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 D172_012045 39e1efda19db8681a748400bffe4062f 152 SUPERFAMILY SSF55486 5 148 1.3E-44 T 14-10-2018 D172_012045 39e1efda19db8681a748400bffe4062f 152 Gene3D G3DSA:3.40.390.30 2 152 4.3E-51 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 D172_012045 39e1efda19db8681a748400bffe4062f 152 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 38 143 4.1E-33 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 D172_012045 39e1efda19db8681a748400bffe4062f 152 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 112 122 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site D172_007610 53abc15957e6115165117a7975e79aca 112 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 1.2E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_007610 53abc15957e6115165117a7975e79aca 112 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.2E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_007610 53abc15957e6115165117a7975e79aca 112 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.2E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_007610 53abc15957e6115165117a7975e79aca 112 SUPERFAMILY SSF46955 1 110 8.06E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily D172_007610 53abc15957e6115165117a7975e79aca 112 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_007610 53abc15957e6115165117a7975e79aca 112 SMART SM00422 1 69 3.5E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_007610 53abc15957e6115165117a7975e79aca 112 Pfam PF13411 MerR HTH family regulatory protein 2 65 1.1E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_007610 53abc15957e6115165117a7975e79aca 112 Gene3D G3DSA:1.10.1660.10 1 111 2.8E-26 T 14-10-2018 D172_011050 a5294301c2de1af46f064f7a1c90177b 865 Gene3D G3DSA:1.20.272.10 242 361 3.6E-35 T 14-10-2018 D172_011050 a5294301c2de1af46f064f7a1c90177b 865 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 737 862 2.9E-24 T 14-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_011050 a5294301c2de1af46f064f7a1c90177b 865 Gene3D G3DSA:1.10.8.60 8 240 1.5E-105 T 14-10-2018 D172_011050 a5294301c2de1af46f064f7a1c90177b 865 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.6E-44 T 14-10-2018 D172_011050 a5294301c2de1af46f064f7a1c90177b 865 SUPERFAMILY SSF48019 244 361 8.16E-25 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 D172_011050 a5294301c2de1af46f064f7a1c90177b 865 Gene3D G3DSA:3.40.50.300 13 177 1.5E-105 T 14-10-2018 D172_011050 a5294301c2de1af46f064f7a1c90177b 865 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 361 2.1E-27 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 D172_011050 a5294301c2de1af46f064f7a1c90177b 865 SUPERFAMILY SSF52540 29 225 6.85E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_011050 a5294301c2de1af46f064f7a1c90177b 865 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 1.6E-136 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 D172_011050 a5294301c2de1af46f064f7a1c90177b 865 Gene3D G3DSA:3.30.300.150 729 847 2.4E-20 T 14-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_011050 a5294301c2de1af46f064f7a1c90177b 865 SMART SM00382 37 178 5.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_017795 e92bba658cbf01e4e605b91a557a51cd 296 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 31 261 1.7E-81 T 14-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC D172_017795 e92bba658cbf01e4e605b91a557a51cd 296 Pfam PF02625 XdhC and CoxI family 26 84 9.5E-16 T 14-10-2018 IPR003777 XdhC- CoxI D172_017795 e92bba658cbf01e4e605b91a557a51cd 296 Pfam PF13478 XdhC Rossmann domain 120 260 4.0E-32 T 14-10-2018 IPR027051 XdhC Rossmann domain D172_017795 e92bba658cbf01e4e605b91a557a51cd 296 Gene3D G3DSA:3.40.50.720 117 264 1.4E-31 T 14-10-2018 D172_010810 57a76a16d8fb792261ce9b71a6e27d62 114 SUPERFAMILY SSF54593 6 112 4.19E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_010810 57a76a16d8fb792261ce9b71a6e27d62 114 Gene3D G3DSA:3.10.180.10 3 114 1.4E-11 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_001230 4573ac83c4953fae2f5fd435cb388463 246 Gene3D G3DSA:2.160.10.10 55 232 2.5E-50 T 14-10-2018 D172_001230 4573ac83c4953fae2f5fd435cb388463 246 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 143 176 2.9E-7 T 14-10-2018 IPR001451 Hexapeptide repeat D172_001230 4573ac83c4953fae2f5fd435cb388463 246 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 102 130 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D172_001230 4573ac83c4953fae2f5fd435cb388463 246 SUPERFAMILY SSF51161 7 186 8.43E-43 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily D172_001230 4573ac83c4953fae2f5fd435cb388463 246 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 5 39 1.2E-6 T 14-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 D172_000275 333058cb1c1fd7795cc6903064c577a4 711 SMART SM00862 33 106 2.7E-11 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_000275 333058cb1c1fd7795cc6903064c577a4 711 SUPERFAMILY SSF82171 195 599 3.49E-13 T 14-10-2018 D172_000275 333058cb1c1fd7795cc6903064c577a4 711 Gene3D G3DSA:1.10.10.10 5 109 1.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_000275 333058cb1c1fd7795cc6903064c577a4 711 SUPERFAMILY SSF46894 13 108 6.8E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_000275 333058cb1c1fd7795cc6903064c577a4 711 Gene3D G3DSA:2.120.10.30 180 394 1.1E-9 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_000275 333058cb1c1fd7795cc6903064c577a4 711 Pfam PF00486 Transcriptional regulatory protein, C terminal 35 106 4.3E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_007835 bc795b03cd6f52dd3abcf13becc8a7a1 119 Pfam PF12514 Protein of unknown function (DUF3718) 40 105 2.6E-9 T 14-10-2018 IPR022193 Protein of unknown function DUF3718 D172_007890 1521995602a70866dec7c8185ae45623 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.2E-40 T 14-10-2018 D172_007890 1521995602a70866dec7c8185ae45623 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 3.2E-40 T 14-10-2018 D172_007890 1521995602a70866dec7c8185ae45623 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 3.2E-40 T 14-10-2018 D172_007890 1521995602a70866dec7c8185ae45623 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 3.2E-40 T 14-10-2018 D172_007890 1521995602a70866dec7c8185ae45623 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.2E-40 T 14-10-2018 D172_007890 1521995602a70866dec7c8185ae45623 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 D172_007890 1521995602a70866dec7c8185ae45623 316 Gene3D G3DSA:3.50.50.60 9 312 6.3E-124 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_007890 1521995602a70866dec7c8185ae45623 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 9.0E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_007890 1521995602a70866dec7c8185ae45623 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 9.0E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_007890 1521995602a70866dec7c8185ae45623 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 9.0E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_007890 1521995602a70866dec7c8185ae45623 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 9.0E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_007890 1521995602a70866dec7c8185ae45623 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 9.0E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_007890 1521995602a70866dec7c8185ae45623 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 9.0E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_007890 1521995602a70866dec7c8185ae45623 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 9.0E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_007890 1521995602a70866dec7c8185ae45623 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 9.0E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_007890 1521995602a70866dec7c8185ae45623 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 9.0E-78 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 D172_007890 1521995602a70866dec7c8185ae45623 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 6.0E-123 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 D172_007890 1521995602a70866dec7c8185ae45623 316 SUPERFAMILY SSF51905 2 313 3.28E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_007890 1521995602a70866dec7c8185ae45623 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 4.0E-48 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 D172_007890 1521995602a70866dec7c8185ae45623 316 Gene3D G3DSA:3.50.50.60 118 244 6.3E-124 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_018050 45574aa44e6a6e0c9f181a1e6bf48037 409 Gene3D G3DSA:1.20.1250.20 17 203 2.6E-34 T 14-10-2018 D172_018050 45574aa44e6a6e0c9f181a1e6bf48037 409 Pfam PF07690 Major Facilitator Superfamily 21 357 1.3E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_018050 45574aa44e6a6e0c9f181a1e6bf48037 409 PRINTS PR01035 Tetracycline resistance protein signature 341 364 5.7E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D172_018050 45574aa44e6a6e0c9f181a1e6bf48037 409 PRINTS PR01035 Tetracycline resistance protein signature 29 45 5.7E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D172_018050 45574aa44e6a6e0c9f181a1e6bf48037 409 PRINTS PR01035 Tetracycline resistance protein signature 142 164 5.7E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D172_018050 45574aa44e6a6e0c9f181a1e6bf48037 409 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 86 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D172_018050 45574aa44e6a6e0c9f181a1e6bf48037 409 SUPERFAMILY SSF103473 16 393 5.62E-58 T 14-10-2018 IPR036259 MFS transporter superfamily D172_018050 45574aa44e6a6e0c9f181a1e6bf48037 409 Gene3D G3DSA:1.20.1250.20 205 393 7.3E-28 T 14-10-2018 D172_007005 ac9d343ea28874f2bc7031911cacadb7 319 Gene3D G3DSA:3.30.2350.10 93 318 3.3E-81 T 14-10-2018 D172_007005 ac9d343ea28874f2bc7031911cacadb7 319 Pfam PF01479 S4 domain 21 66 3.7E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_007005 ac9d343ea28874f2bc7031911cacadb7 319 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_007005 ac9d343ea28874f2bc7031911cacadb7 319 Pfam PF00849 RNA pseudouridylate synthase 102 250 3.5E-35 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_007005 ac9d343ea28874f2bc7031911cacadb7 319 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 17 314 1.3E-89 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_007005 ac9d343ea28874f2bc7031911cacadb7 319 Gene3D G3DSA:3.10.290.10 9 73 1.1E-14 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D172_007005 ac9d343ea28874f2bc7031911cacadb7 319 SUPERFAMILY SSF55120 88 311 6.88E-64 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_007005 ac9d343ea28874f2bc7031911cacadb7 319 SMART SM00363 21 86 1.0E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_007005 ac9d343ea28874f2bc7031911cacadb7 319 SUPERFAMILY SSF55174 20 71 6.39E-8 T 14-10-2018 D172_008020 d8a8e4b41e1caa4e05dc307e1e903a99 236 SUPERFAMILY SSF141523 49 166 8.37E-8 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like D172_002110 fd1e77f011eba46cd7ba715e38016a56 513 Gene3D G3DSA:2.40.128.600 399 499 2.4E-9 T 14-10-2018 D172_002110 fd1e77f011eba46cd7ba715e38016a56 513 Pfam PF00144 Beta-lactamase 28 359 2.2E-66 T 14-10-2018 IPR001466 Beta-lactamase-related D172_002110 fd1e77f011eba46cd7ba715e38016a56 513 Gene3D G3DSA:3.40.710.10 26 374 6.7E-96 T 14-10-2018 D172_002110 fd1e77f011eba46cd7ba715e38016a56 513 SUPERFAMILY SSF56601 25 381 4.85E-86 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D172_002110 fd1e77f011eba46cd7ba715e38016a56 513 Pfam PF11954 Domain of unknown function (DUF3471) 409 510 6.8E-23 T 14-10-2018 IPR021860 Peptidase S12, Pab87-related, C-terminal D172_011195 3494a43fb24ad2fde0d864ed85e2b08d 191 Gene3D G3DSA:3.90.79.10 8 187 1.3E-38 T 14-10-2018 D172_011195 3494a43fb24ad2fde0d864ed85e2b08d 191 SUPERFAMILY SSF55811 27 180 2.71E-28 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D172_011195 3494a43fb24ad2fde0d864ed85e2b08d 191 Pfam PF00293 NUDIX domain 28 145 8.0E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D172_013140 3feed6d14e785e1022cea852708bd65e 301 Pfam PF03466 LysR substrate binding domain 90 294 1.8E-30 T 14-10-2018 IPR005119 LysR, substrate-binding D172_013140 3feed6d14e785e1022cea852708bd65e 301 SUPERFAMILY SSF53850 91 296 2.02E-24 T 14-10-2018 D172_013140 3feed6d14e785e1022cea852708bd65e 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_013140 3feed6d14e785e1022cea852708bd65e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_013140 3feed6d14e785e1022cea852708bd65e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_013140 3feed6d14e785e1022cea852708bd65e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_013140 3feed6d14e785e1022cea852708bd65e 301 Gene3D G3DSA:3.40.190.10 165 268 2.6E-22 T 14-10-2018 D172_013140 3feed6d14e785e1022cea852708bd65e 301 Gene3D G3DSA:1.10.10.10 1 83 3.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_013140 3feed6d14e785e1022cea852708bd65e 301 Gene3D G3DSA:3.40.190.10 91 286 2.6E-22 T 14-10-2018 D172_013140 3feed6d14e785e1022cea852708bd65e 301 SUPERFAMILY SSF46785 1 86 8.66E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_020245 b54a20b63e6d1574e06eba681b733824 191 Pfam PF01965 DJ-1/PfpI family 3 169 5.9E-21 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 D172_020245 b54a20b63e6d1574e06eba681b733824 191 Gene3D G3DSA:3.40.50.880 1 191 1.9E-56 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_020245 b54a20b63e6d1574e06eba681b733824 191 SUPERFAMILY SSF52317 1 189 4.95E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_002275 1fd4daac9a31d72b84067ac9e5ac37be 315 SUPERFAMILY SSF53474 18 297 2.48E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_002275 1fd4daac9a31d72b84067ac9e5ac37be 315 Pfam PF12146 Serine aminopeptidase, S33 45 296 3.6E-44 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 D172_002275 1fd4daac9a31d72b84067ac9e5ac37be 315 Gene3D G3DSA:3.40.50.1820 23 314 1.5E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_001895 4b5e69bcecc00bdaba2e4e7a67b0daa8 188 SMART SM00782 6 52 2.1E-17 T 14-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial D172_001895 4b5e69bcecc00bdaba2e4e7a67b0daa8 188 Pfam PF03831 PhnA domain 123 188 5.4E-27 T 14-10-2018 IPR013988 PhnA protein, C-terminal D172_001895 4b5e69bcecc00bdaba2e4e7a67b0daa8 188 Gene3D G3DSA:2.30.30.40 120 188 9.2E-29 T 14-10-2018 D172_001895 4b5e69bcecc00bdaba2e4e7a67b0daa8 188 SUPERFAMILY SSF82057 117 188 1.56E-24 T 14-10-2018 D172_011580 70b4e775a66449187f127182881f20c6 97 PIRSF PIRSF029218 1 97 2.0E-29 T 14-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 D172_011580 70b4e775a66449187f127182881f20c6 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 92 1.6E-17 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family D172_011580 70b4e775a66449187f127182881f20c6 97 Gene3D G3DSA:3.30.2310.20 1 97 4.7E-24 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D172_010175 c7bc9263adbaba80d2c5e8c0e37e796b 89 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.9E-13 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_010175 c7bc9263adbaba80d2c5e8c0e37e796b 89 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.9E-13 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_010175 c7bc9263adbaba80d2c5e8c0e37e796b 89 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.9E-13 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_010175 c7bc9263adbaba80d2c5e8c0e37e796b 89 SUPERFAMILY SSF47729 1 89 1.91E-28 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D172_010175 c7bc9263adbaba80d2c5e8c0e37e796b 89 Pfam PF00216 Bacterial DNA-binding protein 1 88 5.6E-29 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_010175 c7bc9263adbaba80d2c5e8c0e37e796b 89 Gene3D G3DSA:4.10.520.10 1 89 2.6E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D172_010175 c7bc9263adbaba80d2c5e8c0e37e796b 89 SMART SM00411 1 89 7.3E-30 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_010705 5bd167b880154c8e4f39ad33e0d9a4de 129 SUPERFAMILY SSF55729 32 107 9.78E-5 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_002345 ac5d0721b008eae9f293bff40b62c415 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 3.0E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_002345 ac5d0721b008eae9f293bff40b62c415 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 3.0E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_002345 ac5d0721b008eae9f293bff40b62c415 249 SMART SM00895 98 224 2.5E-16 T 14-10-2018 IPR011711 GntR, C-terminal D172_002345 ac5d0721b008eae9f293bff40b62c415 249 SUPERFAMILY SSF48008 94 231 3.92E-19 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_002345 ac5d0721b008eae9f293bff40b62c415 249 Gene3D G3DSA:1.10.10.10 2 73 3.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_002345 ac5d0721b008eae9f293bff40b62c415 249 Pfam PF07729 FCD domain 98 223 1.7E-18 T 14-10-2018 IPR011711 GntR, C-terminal D172_002345 ac5d0721b008eae9f293bff40b62c415 249 Gene3D G3DSA:1.20.120.530 96 232 4.4E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal D172_002345 ac5d0721b008eae9f293bff40b62c415 249 SMART SM00345 14 73 7.2E-30 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_002345 ac5d0721b008eae9f293bff40b62c415 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 4.2E-26 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_002345 ac5d0721b008eae9f293bff40b62c415 249 SUPERFAMILY SSF46785 6 76 3.78E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_016330 a1a4c03ff81b1d1ba64115c90319a983 114 Pfam PF00581 Rhodanese-like domain 23 105 8.6E-10 T 14-10-2018 IPR001763 Rhodanese-like domain D172_016330 a1a4c03ff81b1d1ba64115c90319a983 114 Gene3D G3DSA:3.40.250.10 2 105 5.9E-18 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily D172_016330 a1a4c03ff81b1d1ba64115c90319a983 114 SMART SM00450 19 107 0.0021 T 14-10-2018 IPR001763 Rhodanese-like domain D172_016330 a1a4c03ff81b1d1ba64115c90319a983 114 SUPERFAMILY SSF52821 10 103 1.65E-22 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily D172_008655 4ba885e8123638ff30dad60e1b80da7c 703 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 62 703 1.1E-93 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 D172_008655 4ba885e8123638ff30dad60e1b80da7c 703 Pfam PF00593 TonB dependent receptor 234 702 3.0E-55 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_008655 4ba885e8123638ff30dad60e1b80da7c 703 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 163 1.2E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_008655 4ba885e8123638ff30dad60e1b80da7c 703 Gene3D G3DSA:2.40.170.20 175 703 5.2E-116 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_008655 4ba885e8123638ff30dad60e1b80da7c 703 SUPERFAMILY SSF56935 41 703 1.83E-126 T 14-10-2018 D172_008655 4ba885e8123638ff30dad60e1b80da7c 703 Gene3D G3DSA:2.170.130.10 48 174 2.5E-23 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_004830 4fe56b00c37e1f762c2922810a4bc794 426 Pfam PF00202 Aminotransferase class-III 32 396 4.3E-76 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D172_004830 4fe56b00c37e1f762c2922810a4bc794 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 425 6.7E-192 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 D172_004830 4fe56b00c37e1f762c2922810a4bc794 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D172_004830 4fe56b00c37e1f762c2922810a4bc794 426 SUPERFAMILY SSF53383 2 425 7.06E-132 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_004830 4fe56b00c37e1f762c2922810a4bc794 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 104.46 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 D172_004830 4fe56b00c37e1f762c2922810a4bc794 426 Gene3D G3DSA:3.40.640.10 69 317 1.1E-176 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_004830 4fe56b00c37e1f762c2922810a4bc794 426 Gene3D G3DSA:3.90.1150.10 8 418 1.1E-176 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_012390 bd211e476f7fab763d92a1e0466bd10f 292 Pfam PF13181 Tetratricopeptide repeat 101 134 0.036 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_012390 bd211e476f7fab763d92a1e0466bd10f 292 Pfam PF13181 Tetratricopeptide repeat 67 99 0.019 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_012390 bd211e476f7fab763d92a1e0466bd10f 292 SUPERFAMILY SSF48452 38 285 2.63E-62 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_012390 bd211e476f7fab763d92a1e0466bd10f 292 PIRSF PIRSF004654 1 292 2.9E-103 T 14-10-2018 IPR023605 Lipoprotein NlpI D172_012390 bd211e476f7fab763d92a1e0466bd10f 292 SMART SM00028 67 100 0.21 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_012390 bd211e476f7fab763d92a1e0466bd10f 292 SMART SM00028 135 168 110.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_012390 bd211e476f7fab763d92a1e0466bd10f 292 SMART SM00028 239 272 20.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_012390 bd211e476f7fab763d92a1e0466bd10f 292 SMART SM00028 101 134 1.1E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_012390 bd211e476f7fab763d92a1e0466bd10f 292 Gene3D G3DSA:1.25.40.10 31 292 3.7E-78 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_011930 fb3e7d5335fb1fbacbfef69fd3af0194 361 Pfam PF00472 RF-1 domain 215 323 2.3E-41 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 D172_011930 fb3e7d5335fb1fbacbfef69fd3af0194 361 Gene3D G3DSA:3.30.70.1660 113 344 3.8E-96 T 14-10-2018 D172_011930 fb3e7d5335fb1fbacbfef69fd3af0194 361 SMART SM00937 67 180 3.4E-69 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 D172_011930 fb3e7d5335fb1fbacbfef69fd3af0194 361 Pfam PF03462 PCRF domain 13 205 2.9E-77 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 D172_011930 fb3e7d5335fb1fbacbfef69fd3af0194 361 SUPERFAMILY SSF75620 12 355 2.09E-135 T 14-10-2018 D172_011930 fb3e7d5335fb1fbacbfef69fd3af0194 361 Gene3D G3DSA:3.30.160.20 212 299 3.8E-96 T 14-10-2018 D172_011930 fb3e7d5335fb1fbacbfef69fd3af0194 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 7.8E-170 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 D172_011930 fb3e7d5335fb1fbacbfef69fd3af0194 361 Gene3D G3DSA:1.20.58.410 4 101 6.9E-8 T 14-10-2018 D172_011930 fb3e7d5335fb1fbacbfef69fd3af0194 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 D172_011930 fb3e7d5335fb1fbacbfef69fd3af0194 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 41.551 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 D172_014220 3e1eb6e4747de594807328185b3e5492 1296 SUPERFAMILY SSF55326 618 815 4.19E-64 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily D172_014220 3e1eb6e4747de594807328185b3e5492 1296 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1294 0.0 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D172_014220 3e1eb6e4747de594807328185b3e5492 1296 SUPERFAMILY SSF56042 429 612 4.64E-52 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily D172_014220 3e1eb6e4747de594807328185b3e5492 1296 SUPERFAMILY SSF52317 1037 1295 1.34E-99 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_014220 3e1eb6e4747de594807328185b3e5492 1296 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1296 21.427 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D172_014220 3e1eb6e4747de594807328185b3e5492 1296 SUPERFAMILY SSF55326 219 425 3.35E-64 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily D172_014220 3e1eb6e4747de594807328185b3e5492 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 429 586 1.7E-27 T 14-10-2018 IPR010918 PurM-like, C-terminal domain D172_014220 3e1eb6e4747de594807328185b3e5492 1296 Pfam PF02769 AIR synthase related protein, C-terminal domain 835 962 1.5E-12 T 14-10-2018 IPR010918 PurM-like, C-terminal domain D172_014220 3e1eb6e4747de594807328185b3e5492 1296 Gene3D G3DSA:1.10.8.750 151 211 6.7E-25 T 14-10-2018 D172_014220 3e1eb6e4747de594807328185b3e5492 1296 Gene3D G3DSA:3.30.1330.10 612 807 1.6E-21 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily D172_014220 3e1eb6e4747de594807328185b3e5492 1296 SUPERFAMILY SSF56042 823 1034 1.36E-54 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily D172_014220 3e1eb6e4747de594807328185b3e5492 1296 SUPERFAMILY SSF109736 154 218 2.75E-20 T 14-10-2018 D172_014220 3e1eb6e4747de594807328185b3e5492 1296 SUPERFAMILY SSF82697 1 148 2.77E-52 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 D172_014220 3e1eb6e4747de594807328185b3e5492 1296 SMART SM01211 1040 1295 5.8E-156 T 14-10-2018 D172_014220 3e1eb6e4747de594807328185b3e5492 1296 Gene3D G3DSA:3.40.50.880 982 1296 7.2E-139 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_014220 3e1eb6e4747de594807328185b3e5492 1296 Gene3D G3DSA:3.30.1330.10 212 418 3.5E-42 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily D172_014220 3e1eb6e4747de594807328185b3e5492 1296 Gene3D G3DSA:3.90.650.10 808 981 3.1E-30 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily D172_014220 3e1eb6e4747de594807328185b3e5492 1296 Gene3D G3DSA:3.90.650.10 419 603 1.1E-52 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily D172_014220 3e1eb6e4747de594807328185b3e5492 1296 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1040 1293 2.5E-107 T 14-10-2018 D172_009300 181b0345e15bf0c47dfd5ac1c688cfc7 1157 Pfam PF00593 TonB dependent receptor 458 1156 2.9E-30 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_009300 181b0345e15bf0c47dfd5ac1c688cfc7 1157 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 44 1157 9.7E-166 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_009300 181b0345e15bf0c47dfd5ac1c688cfc7 1157 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 162 5.5E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_009300 181b0345e15bf0c47dfd5ac1c688cfc7 1157 SUPERFAMILY SSF56935 44 1157 9.52E-80 T 14-10-2018 D172_009300 181b0345e15bf0c47dfd5ac1c688cfc7 1157 Gene3D G3DSA:2.170.130.10 50 167 1.8E-16 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_020820 a014aba246dd0d892c75845260b9334b 365 SUPERFAMILY SSF46785 296 359 3.86E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_020820 a014aba246dd0d892c75845260b9334b 365 Gene3D G3DSA:1.10.3290.10 36 328 5.6E-48 T 14-10-2018 IPR036597 Fido-like domain superfamily D172_020820 a014aba246dd0d892c75845260b9334b 365 SUPERFAMILY SSF140931 94 292 7.32E-40 T 14-10-2018 IPR036597 Fido-like domain superfamily D172_020820 a014aba246dd0d892c75845260b9334b 365 Pfam PF13776 Domain of unknown function (DUF4172) 2 82 4.9E-30 T 14-10-2018 IPR025230 Domain of unknown function DUF4172 D172_020820 a014aba246dd0d892c75845260b9334b 365 Pfam PF02661 Fic/DOC family 111 222 3.0E-18 T 14-10-2018 IPR003812 Fido domain D172_003365 496f96b5c6db87cb30eacfe7f64e5d1e 295 Pfam PF10987 Protein of unknown function (DUF2806) 61 278 8.7E-77 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 D172_003365 496f96b5c6db87cb30eacfe7f64e5d1e 295 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 43 288 3.6E-93 T 14-10-2018 IPR021254 Protein of unknown function DUF2806 D172_007150 e3eb0f33f58a323af9f28c42af51f2c3 342 SUPERFAMILY SSF52540 6 212 7.22E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_007150 e3eb0f33f58a323af9f28c42af51f2c3 342 ProSitePatterns PS00211 ABC transporters family signature. 125 139 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_007150 e3eb0f33f58a323af9f28c42af51f2c3 342 Gene3D G3DSA:3.40.50.300 2 223 3.1E-48 T 14-10-2018 D172_007150 e3eb0f33f58a323af9f28c42af51f2c3 342 SUPERFAMILY SSF50331 238 338 5.39E-6 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal D172_007150 e3eb0f33f58a323af9f28c42af51f2c3 342 Pfam PF00005 ABC transporter 16 152 2.2E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_007150 e3eb0f33f58a323af9f28c42af51f2c3 342 SMART SM00382 23 200 7.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_016595 53116cb42b9de17d9cce4771fa3b7d03 176 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 24 166 8.1E-45 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016595 53116cb42b9de17d9cce4771fa3b7d03 176 PIRSF PIRSF005413 2 176 5.1E-55 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016595 53116cb42b9de17d9cce4771fa3b7d03 176 SUPERFAMILY SSF110111 48 169 5.23E-36 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016595 53116cb42b9de17d9cce4771fa3b7d03 176 Gene3D G3DSA:2.60.370.10 46 176 7.4E-39 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_000105 ad8df3dba7f8713f88e61ba0eb0266f6 483 Pfam PF02386 Cation transport protein 39 477 3.0E-87 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 D172_000105 ad8df3dba7f8713f88e61ba0eb0266f6 483 PIRSF PIRSF006247 1 483 5.1E-179 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 D172_000105 ad8df3dba7f8713f88e61ba0eb0266f6 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 5.6E-116 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 D172_012625 7196161f8d6117de7e8025a85e3bac25 340 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 330 2.5E-114 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 D172_012625 7196161f8d6117de7e8025a85e3bac25 340 SUPERFAMILY SSF51161 34 318 4.5E-84 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily D172_012625 7196161f8d6117de7e8025a85e3bac25 340 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 119 147 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D172_012625 7196161f8d6117de7e8025a85e3bac25 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 223 258 8.0E-6 T 14-10-2018 IPR001451 Hexapeptide repeat D172_012625 7196161f8d6117de7e8025a85e3bac25 340 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 128 162 3.4E-9 T 14-10-2018 IPR001451 Hexapeptide repeat D172_012625 7196161f8d6117de7e8025a85e3bac25 340 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 327 35.352 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 D172_012625 7196161f8d6117de7e8025a85e3bac25 340 Gene3D G3DSA:2.160.10.10 101 310 2.6E-63 T 14-10-2018 D172_012625 7196161f8d6117de7e8025a85e3bac25 340 Gene3D G3DSA:3.40.1390.10 1 99 1.0E-33 T 14-10-2018 D172_012625 7196161f8d6117de7e8025a85e3bac25 340 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 89 2.6E-22 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 D172_012935 f7c0073eca4973079e31fb740160c0bc 144 Pfam PF14316 Domain of unknown function (DUF4381) 8 116 1.1E-20 T 14-10-2018 IPR025489 Protein of unknown function (DUF4381 D172_018580 ebb5590b5428cad41b6bb9ea9e9dfc65 317 PRINTS PR00721 Stomatin signature 83 104 8.7E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 D172_018580 ebb5590b5428cad41b6bb9ea9e9dfc65 317 PRINTS PR00721 Stomatin signature 138 161 8.7E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 D172_018580 ebb5590b5428cad41b6bb9ea9e9dfc65 317 PRINTS PR00721 Stomatin signature 181 202 8.7E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 D172_018580 ebb5590b5428cad41b6bb9ea9e9dfc65 317 PRINTS PR00721 Stomatin signature 162 180 8.7E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 D172_018580 ebb5590b5428cad41b6bb9ea9e9dfc65 317 PRINTS PR00721 Stomatin signature 118 135 8.7E-28 T 14-10-2018 IPR001972 Stomatin family GO:0016020 D172_018580 ebb5590b5428cad41b6bb9ea9e9dfc65 317 SMART SM00244 28 186 4.2E-61 T 14-10-2018 IPR001107 Band 7 domain D172_018580 ebb5590b5428cad41b6bb9ea9e9dfc65 317 Pfam PF16200 C-terminal region of band_7 252 313 2.4E-17 T 14-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 D172_018580 ebb5590b5428cad41b6bb9ea9e9dfc65 317 Pfam PF01145 SPFH domain / Band 7 family 33 202 2.4E-29 T 14-10-2018 IPR001107 Band 7 domain D172_018580 ebb5590b5428cad41b6bb9ea9e9dfc65 317 Gene3D G3DSA:3.30.479.30 56 188 1.2E-42 T 14-10-2018 D172_018580 ebb5590b5428cad41b6bb9ea9e9dfc65 317 SUPERFAMILY SSF117892 59 193 3.53E-42 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily D172_011100 7416705fd4bccd47d0c3500121183dc2 134 Gene3D G3DSA:3.30.420.270 60 129 1.2E-11 T 14-10-2018 D172_011100 7416705fd4bccd47d0c3500121183dc2 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 124 2.8E-30 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 D172_005405 df62f18011b8d2f412ceda37c7fbe859 178 SUPERFAMILY SSF54637 27 166 9.26E-26 T 14-10-2018 IPR029069 HotDog domain superfamily D172_005405 df62f18011b8d2f412ceda37c7fbe859 178 Pfam PF13279 Thioesterase-like superfamily 34 164 3.3E-19 T 14-10-2018 D172_005405 df62f18011b8d2f412ceda37c7fbe859 178 Gene3D G3DSA:3.10.129.10 25 143 7.4E-14 T 14-10-2018 D172_019210 18bd92a33288df0c93238b2de08f17f8 129 Gene3D G3DSA:1.20.120.10 22 117 2.7E-6 T 14-10-2018 D172_019210 18bd92a33288df0c93238b2de08f17f8 129 Pfam PF07361 Cytochrome b562 23 116 6.7E-18 T 14-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 D172_019210 18bd92a33288df0c93238b2de08f17f8 129 SUPERFAMILY SSF47175 23 115 2.35E-11 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 D172_018420 98fa22ab68c10c41330a023f32b21ebc 118 Gene3D G3DSA:3.40.50.300 19 117 4.7E-45 T 14-10-2018 D172_018420 98fa22ab68c10c41330a023f32b21ebc 118 SUPERFAMILY SSF52540 20 69 7.44E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_004305 ae23d2ff98528328f54183e7b86d977d 119 Gene3D G3DSA:3.40.30.10 19 117 1.6E-15 T 14-10-2018 D172_004305 ae23d2ff98528328f54183e7b86d977d 119 Pfam PF00462 Glutaredoxin 43 97 4.0E-12 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 D172_004305 ae23d2ff98528328f54183e7b86d977d 119 SUPERFAMILY SSF52833 41 117 3.8E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_019020 066e874a3c30c994a782feeb0d367e92 153 Pfam PF04073 Aminoacyl-tRNA editing domain 32 144 8.6E-23 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 D172_019020 066e874a3c30c994a782feeb0d367e92 153 Gene3D G3DSA:3.90.960.10 1 153 2.6E-50 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 D172_019020 066e874a3c30c994a782feeb0d367e92 153 SUPERFAMILY SSF55826 2 149 1.22E-37 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 D172_019020 066e874a3c30c994a782feeb0d367e92 153 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 150 5.7E-51 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC D172_019020 066e874a3c30c994a782feeb0d367e92 153 PIRSF PIRSF006181 1 152 2.2E-50 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC D172_001690 51b7110d8f9871b36dd5d8386bd5577d 609 Pfam PF11412 Disulphide bond corrector protein DsbC 32 138 2.2E-24 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain D172_001690 51b7110d8f9871b36dd5d8386bd5577d 609 ProSitePatterns PS00194 Thioredoxin family active site. 513 531 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 D172_001690 51b7110d8f9871b36dd5d8386bd5577d 609 SUPERFAMILY SSF74863 32 144 1.83E-34 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily D172_001690 51b7110d8f9871b36dd5d8386bd5577d 609 Gene3D G3DSA:3.40.30.10 479 606 3.6E-30 T 14-10-2018 D172_001690 51b7110d8f9871b36dd5d8386bd5577d 609 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 213 414 3.0E-18 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 D172_001690 51b7110d8f9871b36dd5d8386bd5577d 609 SUPERFAMILY SSF52833 488 601 3.39E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_001690 51b7110d8f9871b36dd5d8386bd5577d 609 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 605 34.468 T 14-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 D172_001690 51b7110d8f9871b36dd5d8386bd5577d 609 Pfam PF13098 Thioredoxin-like domain 507 601 2.0E-10 T 14-10-2018 IPR012336 Thioredoxin-like fold D172_001690 51b7110d8f9871b36dd5d8386bd5577d 609 Gene3D G3DSA:2.60.40.1250 27 160 1.0E-35 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily D172_002900 431f24b7038c872e205dc4723bccf37c 494 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 230 5.9E-22 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain D172_002900 431f24b7038c872e205dc4723bccf37c 494 Gene3D G3DSA:3.40.50.880 248 433 4.3E-18 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_002900 431f24b7038c872e205dc4723bccf37c 494 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 4 483 4.4E-151 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 D172_002900 431f24b7038c872e205dc4723bccf37c 494 Gene3D G3DSA:3.40.50.300 1 242 4.5E-56 T 14-10-2018 D172_002900 431f24b7038c872e205dc4723bccf37c 494 SUPERFAMILY SSF52540 1 237 1.05E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_002900 431f24b7038c872e205dc4723bccf37c 494 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 491 191.469 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 D172_002900 431f24b7038c872e205dc4723bccf37c 494 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 249 440 1.1E-56 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 D172_002900 431f24b7038c872e205dc4723bccf37c 494 SUPERFAMILY SSF52317 190 371 6.25E-36 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_001445 0c4f923550241578b9030f7ce8b64925 447 Gene3D G3DSA:3.90.230.10 195 445 4.7E-17 T 14-10-2018 D172_001445 0c4f923550241578b9030f7ce8b64925 447 Pfam PF00557 Metallopeptidase family M24 209 414 5.5E-10 T 14-10-2018 IPR000994 Peptidase M24 D172_001445 0c4f923550241578b9030f7ce8b64925 447 SUPERFAMILY SSF55920 197 436 5.63E-16 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like D172_013185 060c3d6d82b08937fde853cb2d860dfa 201 PIRSF PIRSF000239 1 200 2.3E-58 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D172_013185 060c3d6d82b08937fde853cb2d860dfa 201 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 161 195 5.8E-10 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D172_013185 060c3d6d82b08937fde853cb2d860dfa 201 Pfam PF00578 AhpC/TSA family 5 140 1.8E-34 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D172_013185 060c3d6d82b08937fde853cb2d860dfa 201 SUPERFAMILY SSF52833 3 195 2.86E-65 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_013185 060c3d6d82b08937fde853cb2d860dfa 201 Gene3D G3DSA:3.40.30.10 2 198 1.2E-71 T 14-10-2018 D172_014930 4b0ccbbd436dd7d1818a2ab0297a78fa 306 Gene3D G3DSA:3.40.50.20 1 90 1.9E-31 T 14-10-2018 D172_014930 4b0ccbbd436dd7d1818a2ab0297a78fa 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 10 305 1.1E-102 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_014930 4b0ccbbd436dd7d1818a2ab0297a78fa 306 Gene3D G3DSA:3.30.470.20 91 301 4.2E-74 T 14-10-2018 D172_014930 4b0ccbbd436dd7d1818a2ab0297a78fa 306 Gene3D G3DSA:3.30.1490.20 117 183 4.2E-74 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D172_014930 4b0ccbbd436dd7d1818a2ab0297a78fa 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 69 80 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_014930 4b0ccbbd436dd7d1818a2ab0297a78fa 306 PIRSF PIRSF039102 7 58 4.6E-9 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_014930 4b0ccbbd436dd7d1818a2ab0297a78fa 306 PIRSF PIRSF039102 47 306 9.1E-86 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_014930 4b0ccbbd436dd7d1818a2ab0297a78fa 306 Pfam PF07478 D-ala D-ala ligase C-terminus 109 303 1.0E-60 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_014930 4b0ccbbd436dd7d1818a2ab0297a78fa 306 SUPERFAMILY SSF52440 10 102 4.99E-31 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily D172_014930 4b0ccbbd436dd7d1818a2ab0297a78fa 306 Pfam PF01820 D-ala D-ala ligase N-terminus 10 92 3.7E-19 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_014930 4b0ccbbd436dd7d1818a2ab0297a78fa 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_014930 4b0ccbbd436dd7d1818a2ab0297a78fa 306 SUPERFAMILY SSF56059 103 302 6.73E-54 T 14-10-2018 D172_014930 4b0ccbbd436dd7d1818a2ab0297a78fa 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 9 306 35.814 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_005340 488f655ab0b44e8c1a0983e348dacac8 348 PIRSF PIRSF009283 1 348 6.9E-106 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 D172_005340 488f655ab0b44e8c1a0983e348dacac8 348 SUPERFAMILY SSF54593 6 335 6.7E-70 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_005340 488f655ab0b44e8c1a0983e348dacac8 348 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 348 4.8E-118 T 14-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 D172_005340 488f655ab0b44e8c1a0983e348dacac8 348 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 156 270 1.4E-13 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D172_005340 488f655ab0b44e8c1a0983e348dacac8 348 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 5 141 5.5E-43 T 14-10-2018 D172_005340 488f655ab0b44e8c1a0983e348dacac8 348 Gene3D G3DSA:3.10.180.10 2 151 8.1E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_005340 488f655ab0b44e8c1a0983e348dacac8 348 Gene3D G3DSA:3.10.180.10 152 348 2.2E-60 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_000630 5e00eaa598325f24d5f7c59a9fd7934f 144 Pfam PF09335 SNARE associated Golgi protein 17 134 1.7E-14 T 14-10-2018 IPR032816 SNARE associated Golgi protein D172_000630 5e00eaa598325f24d5f7c59a9fd7934f 144 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 2 114 2.0E-6 T 14-10-2018 IPR020143 Uncharacterised protein family, RP436 D172_010370 455069d4e7488dd6996a97db2b34219a 988 Gene3D G3DSA:2.170.130.10 28 172 3.5E-21 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_010370 455069d4e7488dd6996a97db2b34219a 988 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 163 8.4E-19 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_010370 455069d4e7488dd6996a97db2b34219a 988 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 37 988 2.5E-188 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_010370 455069d4e7488dd6996a97db2b34219a 988 SUPERFAMILY SSF56935 29 988 1.06E-86 T 14-10-2018 D172_010370 455069d4e7488dd6996a97db2b34219a 988 Pfam PF00593 TonB dependent receptor 476 987 3.2E-28 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_020055 f317c46c695f307b4826364d4e3f2daf 143 Gene3D G3DSA:3.30.70.920 60 143 1.1E-12 T 14-10-2018 D172_020055 f317c46c695f307b4826364d4e3f2daf 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 5.1E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_020055 f317c46c695f307b4826364d4e3f2daf 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 5.1E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_020055 f317c46c695f307b4826364d4e3f2daf 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 5.1E-8 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_020055 f317c46c695f307b4826364d4e3f2daf 143 SMART SM00344 6 112 1.8E-16 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 D172_020055 f317c46c695f307b4826364d4e3f2daf 143 Pfam PF13404 AsnC-type helix-turn-helix domain 7 46 4.7E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_020055 f317c46c695f307b4826364d4e3f2daf 143 Pfam PF01037 Lrp/AsnC ligand binding domain 73 141 7.4E-12 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D172_020055 f317c46c695f307b4826364d4e3f2daf 143 SUPERFAMILY SSF46785 5 60 3.24E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_020055 f317c46c695f307b4826364d4e3f2daf 143 Gene3D G3DSA:1.10.10.10 7 58 9.6E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_020055 f317c46c695f307b4826364d4e3f2daf 143 SUPERFAMILY SSF54909 68 142 2.15E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel D172_020055 f317c46c695f307b4826364d4e3f2daf 143 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site D172_011650 98682246c00274d6869068d88e8e3191 433 SUPERFAMILY SSF103473 4 429 4.84E-78 T 14-10-2018 IPR036259 MFS transporter superfamily D172_011650 98682246c00274d6869068d88e8e3191 433 Gene3D G3DSA:1.20.1250.20 1 205 1.6E-41 T 14-10-2018 D172_011650 98682246c00274d6869068d88e8e3191 433 Pfam PF07690 Major Facilitator Superfamily 14 386 7.1E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_011650 98682246c00274d6869068d88e8e3191 433 Gene3D G3DSA:1.20.1250.20 230 427 8.5E-29 T 14-10-2018 D172_015155 9ec11849fb6de73d750267080db16ead 277 Gene3D G3DSA:3.40.250.10 1 144 5.2E-33 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily D172_015155 9ec11849fb6de73d750267080db16ead 277 SUPERFAMILY SSF52821 154 275 1.96E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily D172_015155 9ec11849fb6de73d750267080db16ead 277 Pfam PF00581 Rhodanese-like domain 155 266 2.5E-10 T 14-10-2018 IPR001763 Rhodanese-like domain D172_015155 9ec11849fb6de73d750267080db16ead 277 Pfam PF00581 Rhodanese-like domain 40 123 1.1E-9 T 14-10-2018 IPR001763 Rhodanese-like domain D172_015155 9ec11849fb6de73d750267080db16ead 277 SMART SM00450 5 127 2.0E-7 T 14-10-2018 IPR001763 Rhodanese-like domain D172_015155 9ec11849fb6de73d750267080db16ead 277 SMART SM00450 151 270 1.7E-14 T 14-10-2018 IPR001763 Rhodanese-like domain D172_015155 9ec11849fb6de73d750267080db16ead 277 SUPERFAMILY SSF52821 3 178 2.75E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily D172_015155 9ec11849fb6de73d750267080db16ead 277 Gene3D G3DSA:3.40.250.10 153 276 1.6E-36 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily D172_014150 54ec11f1617cc9364c9457aa0a2ec62b 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 8 397 2.3E-205 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 D172_014150 54ec11f1617cc9364c9457aa0a2ec62b 397 Gene3D G3DSA:3.40.640.10 58 296 3.2E-132 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_014150 54ec11f1617cc9364c9457aa0a2ec62b 397 SUPERFAMILY SSF53383 6 395 5.05E-119 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_014150 54ec11f1617cc9364c9457aa0a2ec62b 397 Pfam PF00155 Aminotransferase class I and II 43 386 6.7E-73 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D172_014150 54ec11f1617cc9364c9457aa0a2ec62b 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 3 395 53.303 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 D172_014150 54ec11f1617cc9364c9457aa0a2ec62b 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 D172_014150 54ec11f1617cc9364c9457aa0a2ec62b 397 Gene3D G3DSA:3.90.1150.10 37 387 3.2E-132 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_008420 c061fe774ba323bc6f97a487c72663ac 404 Gene3D G3DSA:3.40.50.970 4 402 8.3E-128 T 14-10-2018 D172_008420 c061fe774ba323bc6f97a487c72663ac 404 SUPERFAMILY SSF52518 24 398 1.25E-98 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold D172_008420 c061fe774ba323bc6f97a487c72663ac 404 Pfam PF00676 Dehydrogenase E1 component 56 361 4.7E-87 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 D172_016880 7dc40c340a780bacece086a5b005fb38 209 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 10 199 1.2E-69 T 14-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 D172_016880 7dc40c340a780bacece086a5b005fb38 209 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 194 1.6E-40 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal D172_016880 7dc40c340a780bacece086a5b005fb38 209 Gene3D G3DSA:3.40.225.10 2 206 1.9E-49 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily D172_016880 7dc40c340a780bacece086a5b005fb38 209 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 204 100.022 T 14-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 D172_016880 7dc40c340a780bacece086a5b005fb38 209 SUPERFAMILY SSF53639 4 195 3.14E-43 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily D172_016880 7dc40c340a780bacece086a5b005fb38 209 SMART SM01007 8 195 1.6E-49 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal D172_020160 51491733abb5936275c96b7defcdd9d5 403 SUPERFAMILY SSF56349 50 393 1.24E-23 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D172_020160 51491733abb5936275c96b7defcdd9d5 403 Pfam PF00589 Phage integrase family 254 389 1.8E-9 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D172_020160 51491733abb5936275c96b7defcdd9d5 403 Gene3D G3DSA:1.10.443.10 207 396 1.8E-18 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D172_001385 b6ac495be84dcd0d1f80b4bbfee8229f 354 PIRSF PIRSF000808 1 342 4.7E-114 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 D172_001385 b6ac495be84dcd0d1f80b4bbfee8229f 354 Gene3D G3DSA:3.30.428.10 176 352 9.2E-67 T 14-10-2018 IPR036265 HIT-like superfamily D172_001385 b6ac495be84dcd0d1f80b4bbfee8229f 354 Gene3D G3DSA:3.30.428.10 41 175 8.5E-53 T 14-10-2018 IPR036265 HIT-like superfamily D172_001385 b6ac495be84dcd0d1f80b4bbfee8229f 354 SUPERFAMILY SSF54197 5 174 1.3E-62 T 14-10-2018 IPR036265 HIT-like superfamily D172_001385 b6ac495be84dcd0d1f80b4bbfee8229f 354 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 175 5.0E-66 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 D172_001385 b6ac495be84dcd0d1f80b4bbfee8229f 354 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 346 1.0E-58 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 D172_001385 b6ac495be84dcd0d1f80b4bbfee8229f 354 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 14-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 D172_001385 b6ac495be84dcd0d1f80b4bbfee8229f 354 SUPERFAMILY SSF54197 179 345 2.38E-49 T 14-10-2018 IPR036265 HIT-like superfamily D172_001385 b6ac495be84dcd0d1f80b4bbfee8229f 354 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 5 347 3.0E-152 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 D172_002575 8b24858a4d34d206d9235dcc275e1509 333 Gene3D G3DSA:3.30.200.20 1 90 2.3E-16 T 14-10-2018 D172_002575 8b24858a4d34d206d9235dcc275e1509 333 Pfam PF01636 Phosphotransferase enzyme family 24 237 1.8E-21 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase D172_002575 8b24858a4d34d206d9235dcc275e1509 333 SUPERFAMILY SSF56112 4 319 1.2E-46 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily D172_002575 8b24858a4d34d206d9235dcc275e1509 333 Gene3D G3DSA:3.90.1200.10 91 333 1.7E-61 T 14-10-2018 D172_017340 46b70bfd09b3f697cdd09e5dd885e4f3 297 SUPERFAMILY SSF53850 95 293 7.96E-21 T 14-10-2018 D172_017340 46b70bfd09b3f697cdd09e5dd885e4f3 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 291 6.9E-91 T 14-10-2018 IPR017685 HTH-type transcriptional regulator ArgP D172_017340 46b70bfd09b3f697cdd09e5dd885e4f3 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.3E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_017340 46b70bfd09b3f697cdd09e5dd885e4f3 297 Gene3D G3DSA:1.10.10.10 1 81 5.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_017340 46b70bfd09b3f697cdd09e5dd885e4f3 297 Gene3D G3DSA:3.40.190.290 90 294 2.4E-58 T 14-10-2018 D172_017340 46b70bfd09b3f697cdd09e5dd885e4f3 297 Pfam PF03466 LysR substrate binding domain 95 289 2.0E-16 T 14-10-2018 IPR005119 LysR, substrate-binding D172_017340 46b70bfd09b3f697cdd09e5dd885e4f3 297 SUPERFAMILY SSF46785 1 111 3.22E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_017340 46b70bfd09b3f697cdd09e5dd885e4f3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_017340 46b70bfd09b3f697cdd09e5dd885e4f3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_017340 46b70bfd09b3f697cdd09e5dd885e4f3 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_020705 362fd5fd915abf508a6564a1b455352a 210 SUPERFAMILY SSF52540 4 201 4.95E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_020705 362fd5fd915abf508a6564a1b455352a 210 Hamap MF_00551 Uridine kinase [udk]. 1 209 37.164 T 14-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 D172_020705 362fd5fd915abf508a6564a1b455352a 210 TIGRFAM TIGR00235 udk: uridine kinase 4 208 6.7E-81 T 14-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 D172_020705 362fd5fd915abf508a6564a1b455352a 210 Gene3D G3DSA:3.40.50.300 3 210 4.4E-60 T 14-10-2018 D172_020705 362fd5fd915abf508a6564a1b455352a 210 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 6 195 4.1E-40 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 D172_020705 362fd5fd915abf508a6564a1b455352a 210 PRINTS PR00988 Uridine kinase signature 4 21 3.6E-32 T 14-10-2018 D172_020705 362fd5fd915abf508a6564a1b455352a 210 PRINTS PR00988 Uridine kinase signature 38 49 3.6E-32 T 14-10-2018 D172_020705 362fd5fd915abf508a6564a1b455352a 210 PRINTS PR00988 Uridine kinase signature 139 149 3.6E-32 T 14-10-2018 D172_020705 362fd5fd915abf508a6564a1b455352a 210 PRINTS PR00988 Uridine kinase signature 83 98 3.6E-32 T 14-10-2018 D172_020705 362fd5fd915abf508a6564a1b455352a 210 PRINTS PR00988 Uridine kinase signature 153 164 3.6E-32 T 14-10-2018 D172_020705 362fd5fd915abf508a6564a1b455352a 210 PRINTS PR00988 Uridine kinase signature 175 188 3.6E-32 T 14-10-2018 D172_016840 b8b02a78ae60da38edc496c15726e556 718 SUPERFAMILY SSF52172 474 594 4.27E-27 T 14-10-2018 IPR011006 CheY-like superfamily D172_016840 b8b02a78ae60da38edc496c15726e556 718 SMART SM00388 230 295 9.2E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_016840 b8b02a78ae60da38edc496c15726e556 718 Gene3D G3DSA:3.30.565.10 298 458 2.6E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_016840 b8b02a78ae60da38edc496c15726e556 718 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 294 1.3E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_016840 b8b02a78ae60da38edc496c15726e556 718 SUPERFAMILY SSF55874 285 452 1.07E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_016840 b8b02a78ae60da38edc496c15726e556 718 SMART SM00387 342 456 1.7E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_016840 b8b02a78ae60da38edc496c15726e556 718 SMART SM00448 475 589 6.9E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_016840 b8b02a78ae60da38edc496c15726e556 718 Pfam PF00072 Response regulator receiver domain 477 589 1.2E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_016840 b8b02a78ae60da38edc496c15726e556 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 4.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_016840 b8b02a78ae60da38edc496c15726e556 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 4.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_016840 b8b02a78ae60da38edc496c15726e556 718 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 4.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_016840 b8b02a78ae60da38edc496c15726e556 718 SUPERFAMILY SSF47384 215 294 2.35E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_016840 b8b02a78ae60da38edc496c15726e556 718 Gene3D G3DSA:3.40.50.2300 463 599 6.3E-29 T 14-10-2018 D172_016840 b8b02a78ae60da38edc496c15726e556 718 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 452 3.1E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_016840 b8b02a78ae60da38edc496c15726e556 718 Gene3D G3DSA:1.10.287.130 209 293 1.0E-17 T 14-10-2018 D172_011380 4f3d7d8a72711a5bc99c52cda08747f4 345 Pfam PF02371 Transposase IS116/IS110/IS902 family 222 305 4.7E-18 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D172_011380 4f3d7d8a72711a5bc99c52cda08747f4 345 Pfam PF01548 Transposase 6 144 9.0E-15 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D172_003565 4f3d7d8a72711a5bc99c52cda08747f4 345 Pfam PF02371 Transposase IS116/IS110/IS902 family 222 305 4.7E-18 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D172_003565 4f3d7d8a72711a5bc99c52cda08747f4 345 Pfam PF01548 Transposase 6 144 9.0E-15 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D172_003825 4f3d7d8a72711a5bc99c52cda08747f4 345 Pfam PF02371 Transposase IS116/IS110/IS902 family 222 305 4.7E-18 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D172_003825 4f3d7d8a72711a5bc99c52cda08747f4 345 Pfam PF01548 Transposase 6 144 9.0E-15 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D172_005415 00097b274c342a5ba1d76dd142247f4c 394 Pfam PF01546 Peptidase family M20/M25/M40 78 388 4.0E-34 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 D172_005415 00097b274c342a5ba1d76dd142247f4c 394 SUPERFAMILY SSF55031 194 301 2.75E-20 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain D172_005415 00097b274c342a5ba1d76dd142247f4c 394 Gene3D G3DSA:3.30.70.360 194 306 9.9E-103 T 14-10-2018 D172_005415 00097b274c342a5ba1d76dd142247f4c 394 Pfam PF07687 Peptidase dimerisation domain 190 291 1.2E-18 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain D172_005415 00097b274c342a5ba1d76dd142247f4c 394 Gene3D G3DSA:3.40.630.10 23 379 9.9E-103 T 14-10-2018 D172_005415 00097b274c342a5ba1d76dd142247f4c 394 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 77 86 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 D172_005415 00097b274c342a5ba1d76dd142247f4c 394 SUPERFAMILY SSF53187 15 389 6.01E-57 T 14-10-2018 D172_017055 323c85b0c00539f780fad40ad3e589ac 954 SUPERFAMILY SSF56935 35 954 5.7E-93 T 14-10-2018 D172_017055 323c85b0c00539f780fad40ad3e589ac 954 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 171 2.9E-23 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_017055 323c85b0c00539f780fad40ad3e589ac 954 Pfam PF00593 TonB dependent receptor 353 936 1.9E-40 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_017055 323c85b0c00539f780fad40ad3e589ac 954 Gene3D G3DSA:2.170.130.10 41 176 6.3E-34 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_010625 fb682cf9fb1896a98c522d705df8d1b8 81 Pfam PF04606 Ogr/Delta-like zinc finger 5 52 6.5E-15 T 14-10-2018 IPR007684 Zinc finger, Ogr/Delta-type D172_000180 1041afcb240260d13ce8cdd0099b509e 44 Pfam PF00468 Ribosomal protein L34 1 44 4.7E-25 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_000180 1041afcb240260d13ce8cdd0099b509e 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 6.0E-16 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_000180 1041afcb240260d13ce8cdd0099b509e 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.884 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_000180 1041afcb240260d13ce8cdd0099b509e 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.0E-25 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_000180 1041afcb240260d13ce8cdd0099b509e 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_019815 fa96978b9c7e70accd764bc74dc4fbe0 616 Gene3D G3DSA:3.40.630.10 119 409 6.0E-77 T 14-10-2018 D172_019815 fa96978b9c7e70accd764bc74dc4fbe0 616 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 536 599 2.1E-11 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial D172_019815 fa96978b9c7e70accd764bc74dc4fbe0 616 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 430 496 3.4E-10 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial D172_019815 fa96978b9c7e70accd764bc74dc4fbe0 616 Pfam PF04389 Peptidase family M28 194 388 1.9E-30 T 14-10-2018 IPR007484 Peptidase M28 D172_019815 fa96978b9c7e70accd764bc74dc4fbe0 616 Gene3D G3DSA:2.60.120.380 410 510 4.0E-33 T 14-10-2018 D172_019815 fa96978b9c7e70accd764bc74dc4fbe0 616 Gene3D G3DSA:2.60.120.380 519 614 9.6E-29 T 14-10-2018 D172_019815 fa96978b9c7e70accd764bc74dc4fbe0 616 SUPERFAMILY SSF53187 120 399 4.37E-57 T 14-10-2018 D172_019815 fa96978b9c7e70accd764bc74dc4fbe0 616 PIRSF PIRSF036685 517 616 2.3E-27 T 14-10-2018 IPR012189 Peptidase M28E, aminopeptidase AP1 D172_019815 fa96978b9c7e70accd764bc74dc4fbe0 616 PIRSF PIRSF036685 3 511 7.0E-197 T 14-10-2018 IPR012189 Peptidase M28E, aminopeptidase AP1 D172_003415 e02c8fd09e324da1e9a2c8e59ec30d1b 499 Pfam PF04552 Sigma-54, DNA binding domain 339 496 4.4E-72 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding D172_003415 e02c8fd09e324da1e9a2c8e59ec30d1b 499 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 477 484 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D172_003415 e02c8fd09e324da1e9a2c8e59ec30d1b 499 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 5.4E-17 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D172_003415 e02c8fd09e324da1e9a2c8e59ec30d1b 499 PIRSF PIRSF000774 1 499 1.1E-153 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D172_003415 e02c8fd09e324da1e9a2c8e59ec30d1b 499 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 386 405 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D172_003415 e02c8fd09e324da1e9a2c8e59ec30d1b 499 PRINTS PR00045 Sigma-54 factor signature 414 425 9.9E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D172_003415 e02c8fd09e324da1e9a2c8e59ec30d1b 499 PRINTS PR00045 Sigma-54 factor signature 398 410 9.9E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D172_003415 e02c8fd09e324da1e9a2c8e59ec30d1b 499 PRINTS PR00045 Sigma-54 factor signature 472 490 9.9E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D172_003415 e02c8fd09e324da1e9a2c8e59ec30d1b 499 PRINTS PR00045 Sigma-54 factor signature 208 225 9.9E-32 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D172_003415 e02c8fd09e324da1e9a2c8e59ec30d1b 499 Gene3D G3DSA:1.10.10.1330 133 273 3.4E-21 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily D172_003415 e02c8fd09e324da1e9a2c8e59ec30d1b 499 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 496 1.3E-154 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 D172_003415 e02c8fd09e324da1e9a2c8e59ec30d1b 499 Gene3D G3DSA:1.10.10.60 439 496 1.5E-24 T 14-10-2018 D172_003415 e02c8fd09e324da1e9a2c8e59ec30d1b 499 Pfam PF04963 Sigma-54 factor, core binding domain 131 325 2.3E-58 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 D172_005945 de448570f51e7e9d476b180c4247a363 275 Gene3D G3DSA:3.30.420.10 107 243 5.9E-24 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_005945 de448570f51e7e9d476b180c4247a363 275 Pfam PF00665 Integrase core domain 108 221 1.9E-27 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_005945 de448570f51e7e9d476b180c4247a363 275 SUPERFAMILY SSF53098 101 260 1.77E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 Gene3D G3DSA:3.30.565.10 354 538 1.8E-56 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 SMART SM00387 398 539 4.0E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 SUPERFAMILY SSF55874 351 541 2.29E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 SMART SM00073 5 102 1.3E-29 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 Pfam PF01627 Hpt domain 8 106 3.4E-18 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 SMART SM01231 289 353 2.1E-19 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 Gene3D G3DSA:1.10.287.560 289 353 1.3E-16 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 Gene3D G3DSA:1.20.120.160 1 143 9.5E-40 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 Pfam PF01584 CheW-like domain 546 672 3.9E-24 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 Gene3D G3DSA:2.30.30.40 539 667 3.3E-36 T 14-10-2018 D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 538 1.6E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 517 7.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 536 7.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 7.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 493 7.4E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 SUPERFAMILY SSF47384 290 354 1.14E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 SMART SM00260 531 671 2.5E-40 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 Gene3D G3DSA:2.40.50.180 562 626 3.3E-36 T 14-10-2018 D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 SUPERFAMILY SSF47226 5 127 1.27E-31 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 290 353 2.3E-17 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 D172_016550 095271ee8ad636bf7a78a135eb3c264b 695 SUPERFAMILY SSF50341 538 671 1.7E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 D172_008340 789a9b7f107c9e49f07c8750c5731e0f 590 PIRSF PIRSF000171 1 582 1.6E-52 T 14-10-2018 D172_008340 789a9b7f107c9e49f07c8750c5731e0f 590 Gene3D G3DSA:3.50.50.60 9 416 6.5E-169 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_008340 789a9b7f107c9e49f07c8750c5731e0f 590 SUPERFAMILY SSF46977 454 590 5.1E-45 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_008340 789a9b7f107c9e49f07c8750c5731e0f 590 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 590 2.2E-238 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_008340 789a9b7f107c9e49f07c8750c5731e0f 590 Gene3D G3DSA:3.90.700.10 246 350 6.5E-169 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_008340 789a9b7f107c9e49f07c8750c5731e0f 590 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 590 4.7E-269 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_008340 789a9b7f107c9e49f07c8750c5731e0f 590 SUPERFAMILY SSF51905 5 437 3.75E-74 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_008340 789a9b7f107c9e49f07c8750c5731e0f 590 Gene3D G3DSA:4.10.80.40 550 590 2.3E-21 T 14-10-2018 D172_008340 789a9b7f107c9e49f07c8750c5731e0f 590 Gene3D G3DSA:1.20.58.100 431 549 7.9E-37 T 14-10-2018 D172_008340 789a9b7f107c9e49f07c8750c5731e0f 590 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 590 1.7E-35 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_008340 789a9b7f107c9e49f07c8750c5731e0f 590 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_008340 789a9b7f107c9e49f07c8750c5731e0f 590 Pfam PF00890 FAD binding domain 9 405 1.7E-119 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_008340 789a9b7f107c9e49f07c8750c5731e0f 590 SUPERFAMILY SSF56425 236 356 1.64E-41 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_011790 cf99ebaea146213ecacd74eb4ab44ec8 172 Pfam PF11143 Protein of unknown function (DUF2919) 4 154 2.4E-42 T 14-10-2018 IPR021318 Protein of unknown function DUF2919 D172_020675 f3c0086c2064c53d52f6356efb090566 117 Pfam PF13473 Cupredoxin-like domain 16 107 4.9E-24 T 14-10-2018 IPR028096 EfeO-type cupredoxin-like domain D172_020675 f3c0086c2064c53d52f6356efb090566 117 Gene3D G3DSA:2.60.40.420 16 108 6.1E-17 T 14-10-2018 IPR008972 Cupredoxin D172_020675 f3c0086c2064c53d52f6356efb090566 117 SUPERFAMILY SSF49503 12 108 1.04E-11 T 14-10-2018 IPR008972 Cupredoxin D172_015065 738ce7d4d2bca08f18ad62743af71928 371 Gene3D G3DSA:3.30.1150.10 273 369 4.2E-20 T 14-10-2018 D172_015065 738ce7d4d2bca08f18ad62743af71928 371 PRINTS PR01374 Gram-negative bacterial tonB protein signature 286 307 9.6E-6 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_015065 738ce7d4d2bca08f18ad62743af71928 371 PRINTS PR01374 Gram-negative bacterial tonB protein signature 326 343 9.6E-6 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_015065 738ce7d4d2bca08f18ad62743af71928 371 PRINTS PR01374 Gram-negative bacterial tonB protein signature 307 325 9.6E-6 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_015065 738ce7d4d2bca08f18ad62743af71928 371 SUPERFAMILY SSF74653 284 366 5.89E-21 T 14-10-2018 D172_015065 738ce7d4d2bca08f18ad62743af71928 371 Gene3D G3DSA:1.25.40.10 143 272 4.4E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_015065 738ce7d4d2bca08f18ad62743af71928 371 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 292 368 1.2E-10 T 14-10-2018 IPR006260 TonB/TolA, C-terminal D172_015065 738ce7d4d2bca08f18ad62743af71928 371 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 291 368 3.8E-15 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 D172_015065 738ce7d4d2bca08f18ad62743af71928 371 SUPERFAMILY SSF48452 174 275 4.22E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_004825 d017a8397b2aa274a7ddc81f7480c530 613 Gene3D G3DSA:1.10.287.950 285 613 1.5E-61 T 14-10-2018 D172_004825 d017a8397b2aa274a7ddc81f7480c530 613 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 423 576 8.3E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_004825 d017a8397b2aa274a7ddc81f7480c530 613 SUPERFAMILY SSF58104 304 612 1.57E-64 T 14-10-2018 D172_004825 d017a8397b2aa274a7ddc81f7480c530 613 SMART SM00283 351 612 7.3E-62 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_000645 73fc36fba56dcd939bd52bf361ce7bec 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_000645 73fc36fba56dcd939bd52bf361ce7bec 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_000645 73fc36fba56dcd939bd52bf361ce7bec 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_000645 73fc36fba56dcd939bd52bf361ce7bec 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 237 2.1E-26 T 14-10-2018 D172_000645 73fc36fba56dcd939bd52bf361ce7bec 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D172_000645 73fc36fba56dcd939bd52bf361ce7bec 239 Gene3D G3DSA:3.40.50.720 4 239 4.3E-45 T 14-10-2018 D172_000645 73fc36fba56dcd939bd52bf361ce7bec 239 SUPERFAMILY SSF51735 5 238 1.58E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_010415 7db9c8232efeb7762fc9c17d1814e1f3 171 SUPERFAMILY SSF51261 25 148 1.1E-27 T 14-10-2018 IPR011055 Duplicated hybrid motif D172_010415 7db9c8232efeb7762fc9c17d1814e1f3 171 Pfam PF01551 Peptidase family M23 52 139 1.6E-20 T 14-10-2018 IPR016047 Peptidase M23 D172_010415 7db9c8232efeb7762fc9c17d1814e1f3 171 Gene3D G3DSA:2.70.70.10 19 159 5.6E-27 T 14-10-2018 IPR011055 Duplicated hybrid motif D172_015940 caac4a687098e01b61ea1a2f9c224e57 165 SUPERFAMILY SSF89562 2 158 1.44E-38 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily D172_015940 caac4a687098e01b61ea1a2f9c224e57 165 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 45.51 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 D172_015940 caac4a687098e01b61ea1a2f9c224e57 165 Gene3D G3DSA:3.50.30.40 1 161 2.2E-54 T 14-10-2018 D172_015940 caac4a687098e01b61ea1a2f9c224e57 165 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 1.6E-88 T 14-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 D172_015940 caac4a687098e01b61ea1a2f9c224e57 165 Pfam PF03737 Aldolase/RraA 5 152 1.2E-32 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein D172_015940 caac4a687098e01b61ea1a2f9c224e57 165 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 7.3E-59 T 14-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 D172_004070 d0ff864b5d3338d3834ca9bbbb9e1d74 686 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 151 1.1E-14 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_004070 d0ff864b5d3338d3834ca9bbbb9e1d74 686 Gene3D G3DSA:2.40.170.20 172 686 8.0E-74 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_004070 d0ff864b5d3338d3834ca9bbbb9e1d74 686 Gene3D G3DSA:2.170.130.10 28 155 8.7E-22 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_004070 d0ff864b5d3338d3834ca9bbbb9e1d74 686 SUPERFAMILY SSF56935 18 686 1.32E-109 T 14-10-2018 D172_004070 d0ff864b5d3338d3834ca9bbbb9e1d74 686 Pfam PF00593 TonB dependent receptor 168 685 1.1E-46 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_001200 50bd3d6b5063f8c7457bfccdbab2cb53 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 2.0E-62 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 D172_001200 50bd3d6b5063f8c7457bfccdbab2cb53 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.715 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 D172_001200 50bd3d6b5063f8c7457bfccdbab2cb53 145 Gene3D G3DSA:3.50.80.10 1 145 8.3E-57 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily D172_001200 50bd3d6b5063f8c7457bfccdbab2cb53 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 4 143 2.1E-54 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 D172_001200 50bd3d6b5063f8c7457bfccdbab2cb53 145 SUPERFAMILY SSF69500 1 143 1.96E-55 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily D172_001400 a557947644c9d1f9d0c7d9fe586d2647 82 Gene3D G3DSA:1.20.58.660 11 82 2.3E-13 T 14-10-2018 D172_001400 a557947644c9d1f9d0c7d9fe586d2647 82 Pfam PF04325 Protein of unknown function (DUF465) 29 75 8.8E-11 T 14-10-2018 IPR007420 Protein of unknown function DUF465 D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 188 310 3.1E-11 T 14-10-2018 IPR000014 PAS domain D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 68 191 8.7E-8 T 14-10-2018 IPR000014 PAS domain D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 SUPERFAMILY SSF55785 55 182 1.21E-11 T 14-10-2018 IPR035965 PAS domain superfamily D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 SUPERFAMILY SSF55073 320 470 5.73E-44 T 14-10-2018 IPR029787 Nucleotide cyclase D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 SMART SM00091 192 255 0.058 T 14-10-2018 IPR000014 PAS domain D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 SMART SM00091 70 134 78.0 T 14-10-2018 IPR000014 PAS domain D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 Gene3D G3DSA:3.30.450.20 60 181 6.6E-15 T 14-10-2018 D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 SUPERFAMILY SSF141868 485 734 8.24E-83 T 14-10-2018 IPR035919 EAL domain superfamily D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 SUPERFAMILY SSF55785 203 310 1.39E-11 T 14-10-2018 IPR035965 PAS domain superfamily D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 Gene3D G3DSA:3.30.70.270 308 483 2.5E-54 T 14-10-2018 D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 SMART SM00267 303 470 2.2E-53 T 14-10-2018 IPR000160 GGDEF domain D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 Pfam PF13426 PAS domain 203 302 9.1E-8 T 14-10-2018 IPR000014 PAS domain D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 Gene3D G3DSA:3.30.450.20 186 307 2.2E-18 T 14-10-2018 D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 Gene3D G3DSA:3.20.20.450 484 734 5.2E-92 T 14-10-2018 IPR035919 EAL domain superfamily D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 Pfam PF00563 EAL domain 492 720 5.5E-68 T 14-10-2018 IPR001633 EAL domain D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 SMART SM00052 480 725 4.4E-103 T 14-10-2018 IPR001633 EAL domain D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 Pfam PF08447 PAS fold 115 178 4.3E-10 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 311 470 4.9E-38 T 14-10-2018 IPR000160 GGDEF domain D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 Pfam PF00990 Diguanylate cyclase, GGDEF domain 315 465 7.8E-44 T 14-10-2018 IPR000160 GGDEF domain D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 SMART SM00086 141 184 44.0 T 14-10-2018 IPR001610 PAC motif D172_005805 1a689e093cebb6f95d13f53d631f76ee 753 SMART SM00086 261 303 1.2 T 14-10-2018 IPR001610 PAC motif D172_002205 85e521d1c9d577372c915a8568287546 287 Pfam PF04545 Sigma-70, region 4 233 283 6.0E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 D172_002205 85e521d1c9d577372c915a8568287546 287 PRINTS PR00046 Major sigma-70 factor signature 80 93 3.6E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_002205 85e521d1c9d577372c915a8568287546 287 PRINTS PR00046 Major sigma-70 factor signature 237 249 3.6E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_002205 85e521d1c9d577372c915a8568287546 287 PRINTS PR00046 Major sigma-70 factor signature 256 271 3.6E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_002205 85e521d1c9d577372c915a8568287546 287 PRINTS PR00046 Major sigma-70 factor signature 271 282 3.6E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_002205 85e521d1c9d577372c915a8568287546 287 SUPERFAMILY SSF88946 15 125 1.11E-39 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D172_002205 85e521d1c9d577372c915a8568287546 287 Gene3D G3DSA:1.20.140.160 132 287 7.3E-16 T 14-10-2018 D172_002205 85e521d1c9d577372c915a8568287546 287 Gene3D G3DSA:1.20.120.1810 11 125 3.8E-29 T 14-10-2018 D172_002205 85e521d1c9d577372c915a8568287546 287 Pfam PF00140 Sigma-70 factor, region 1.2 22 48 5.3E-6 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_002205 85e521d1c9d577372c915a8568287546 287 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 52 286 7.7E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D172_002205 85e521d1c9d577372c915a8568287546 287 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 287 50.857 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_002205 85e521d1c9d577372c915a8568287546 287 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 18 286 9.7E-126 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_002205 85e521d1c9d577372c915a8568287546 287 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 256 282 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_002205 85e521d1c9d577372c915a8568287546 287 SUPERFAMILY SSF88659 201 286 7.29E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_002205 85e521d1c9d577372c915a8568287546 287 Pfam PF04542 Sigma-70 region 2 56 125 2.2E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D172_002205 85e521d1c9d577372c915a8568287546 287 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 80 93 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 D172_018255 1c883b2eb337e287d1d9675ef7e744bf 551 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 395 409 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_018255 1c883b2eb337e287d1d9675ef7e744bf 551 Pfam PF00849 RNA pseudouridylate synthase 356 504 7.8E-31 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_018255 1c883b2eb337e287d1d9675ef7e744bf 551 Gene3D G3DSA:3.30.2350.10 339 550 1.0E-63 T 14-10-2018 D172_018255 1c883b2eb337e287d1d9675ef7e744bf 551 SUPERFAMILY SSF55120 348 548 2.56E-60 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_018110 5c7d590a65a20f6bf218da538b98c844 265 SUPERFAMILY SSF53098 102 260 7.59E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_018110 5c7d590a65a20f6bf218da538b98c844 265 Gene3D G3DSA:3.30.420.10 104 260 2.5E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_018110 5c7d590a65a20f6bf218da538b98c844 265 Pfam PF00665 Integrase core domain 109 222 1.7E-30 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_018110 5c7d590a65a20f6bf218da538b98c844 265 Pfam PF13276 HTH-like domain 33 84 1.6E-8 T 14-10-2018 IPR025948 HTH-like domain D172_017755 0c573fcdcc0bd66014eec28076fcef8a 133 Pfam PF10627 Curli assembly protein CsgE 31 129 1.5E-31 T 14-10-2018 IPR018900 Curli assembly protein CsgE D172_015775 fec9e121cd8114db34e9aed8fbb3c7ad 241 Hamap MF_00984 Single-stranded DNA-binding protein. 5 117 37.895 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D172_015775 fec9e121cd8114db34e9aed8fbb3c7ad 241 Pfam PF00436 Single-strand binding protein family 5 112 2.2E-41 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 D172_015775 fec9e121cd8114db34e9aed8fbb3c7ad 241 SUPERFAMILY SSF50249 3 171 8.57E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_015775 fec9e121cd8114db34e9aed8fbb3c7ad 241 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 241 2.8E-48 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 D172_015775 fec9e121cd8114db34e9aed8fbb3c7ad 241 PIRSF PIRSF002070 127 212 4000.0 T 14-10-2018 D172_015775 fec9e121cd8114db34e9aed8fbb3c7ad 241 PIRSF PIRSF002070 1 160 4.3E-36 T 14-10-2018 D172_015775 fec9e121cd8114db34e9aed8fbb3c7ad 241 Gene3D G3DSA:2.40.50.140 1 115 2.9E-48 T 14-10-2018 D172_008610 ee6599dc82f6e42eece114fda45c9462 68 PIRSF PIRSF002599 1 66 4.5E-12 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 D172_008610 ee6599dc82f6e42eece114fda45c9462 68 PRINTS PR00050 Cold shock protein signature 25 34 2.1E-5 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_008610 ee6599dc82f6e42eece114fda45c9462 68 PRINTS PR00050 Cold shock protein signature 39 57 2.1E-5 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_008610 ee6599dc82f6e42eece114fda45c9462 68 PRINTS PR00050 Cold shock protein signature 4 19 2.1E-5 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_008610 ee6599dc82f6e42eece114fda45c9462 68 Gene3D G3DSA:2.40.50.140 1 65 3.1E-14 T 14-10-2018 D172_008610 ee6599dc82f6e42eece114fda45c9462 68 SUPERFAMILY SSF50249 1 64 7.71E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_008610 ee6599dc82f6e42eece114fda45c9462 68 SMART SM00357 3 68 3.6E-4 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 D172_008610 ee6599dc82f6e42eece114fda45c9462 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 57 2.0E-9 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_014370 b592dafc62bdc541dc34bbef58b52c07 311 Pfam PF08544 GHMP kinases C terminal 221 285 2.3E-4 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain D172_014370 b592dafc62bdc541dc34bbef58b52c07 311 Gene3D G3DSA:3.30.230.10 4 168 5.8E-74 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D172_014370 b592dafc62bdc541dc34bbef58b52c07 311 Gene3D G3DSA:3.30.70.890 169 278 5.8E-74 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily D172_014370 b592dafc62bdc541dc34bbef58b52c07 311 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 91 102 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 D172_014370 b592dafc62bdc541dc34bbef58b52c07 311 PIRSF PIRSF000676 1 308 8.3E-68 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 D172_014370 b592dafc62bdc541dc34bbef58b52c07 311 TIGRFAM TIGR00191 thrB: homoserine kinase 3 306 1.8E-76 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 D172_014370 b592dafc62bdc541dc34bbef58b52c07 311 Hamap MF_00384 Homoserine kinase [thrB]. 4 308 25.006 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 D172_014370 b592dafc62bdc541dc34bbef58b52c07 311 Pfam PF00288 GHMP kinases N terminal domain 85 151 7.0E-13 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 D172_014370 b592dafc62bdc541dc34bbef58b52c07 311 SUPERFAMILY SSF54211 1 154 2.5E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_014370 b592dafc62bdc541dc34bbef58b52c07 311 SUPERFAMILY SSF55060 172 289 1.62E-21 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily D172_014370 b592dafc62bdc541dc34bbef58b52c07 311 PRINTS PR00958 Homoserine kinase signature 9 24 1.5E-26 T 14-10-2018 D172_014370 b592dafc62bdc541dc34bbef58b52c07 311 PRINTS PR00958 Homoserine kinase signature 138 151 1.5E-26 T 14-10-2018 D172_014370 b592dafc62bdc541dc34bbef58b52c07 311 PRINTS PR00958 Homoserine kinase signature 255 270 1.5E-26 T 14-10-2018 D172_014370 b592dafc62bdc541dc34bbef58b52c07 311 PRINTS PR00958 Homoserine kinase signature 98 113 1.5E-26 T 14-10-2018 D172_014370 b592dafc62bdc541dc34bbef58b52c07 311 PRINTS PR00958 Homoserine kinase signature 176 193 1.5E-26 T 14-10-2018 D172_010840 0b8f69a97dcb150574cbc21d5eb76c3a 258 Gene3D G3DSA:3.40.190.100 88 201 2.9E-36 T 14-10-2018 D172_010840 0b8f69a97dcb150574cbc21d5eb76c3a 258 Gene3D G3DSA:3.40.190.10 7 258 2.9E-36 T 14-10-2018 D172_010840 0b8f69a97dcb150574cbc21d5eb76c3a 258 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 5 258 8.7E-46 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 D172_010840 0b8f69a97dcb150574cbc21d5eb76c3a 258 SUPERFAMILY SSF53850 6 257 5.84E-38 T 14-10-2018 D172_010815 abebee56b6ce1017b21bbb31a3f45474 311 Gene3D G3DSA:3.40.190.290 90 291 9.1E-48 T 14-10-2018 D172_010815 abebee56b6ce1017b21bbb31a3f45474 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.7E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_010815 abebee56b6ce1017b21bbb31a3f45474 311 Gene3D G3DSA:1.10.10.10 1 87 3.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_010815 abebee56b6ce1017b21bbb31a3f45474 311 SUPERFAMILY SSF53850 88 294 2.53E-36 T 14-10-2018 D172_010815 abebee56b6ce1017b21bbb31a3f45474 311 SUPERFAMILY SSF46785 1 111 1.97E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_010815 abebee56b6ce1017b21bbb31a3f45474 311 Pfam PF03466 LysR substrate binding domain 87 291 3.1E-36 T 14-10-2018 IPR005119 LysR, substrate-binding D172_012110 7959577836ec37f4a5196c32578e4f5d 193 Pfam PF01810 LysE type translocator 15 188 1.6E-21 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D172_012755 8d3ad63577cd737d120394a2e2897af1 344 SUPERFAMILY SSF161098 93 320 9.48E-21 T 14-10-2018 IPR035906 MetI-like superfamily D172_012755 8d3ad63577cd737d120394a2e2897af1 344 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 335 2.1E-42 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D172_007545 9efc4bc0a74d42269a180e6d403880b4 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 5 439 1.6E-208 T 14-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 D172_007545 9efc4bc0a74d42269a180e6d403880b4 439 SUPERFAMILY SSF51658 5 439 3.66E-165 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily D172_007545 9efc4bc0a74d42269a180e6d403880b4 439 PRINTS PR00688 Xylose isomerase signature 302 313 4.6E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 D172_007545 9efc4bc0a74d42269a180e6d403880b4 439 PRINTS PR00688 Xylose isomerase signature 135 155 4.6E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 D172_007545 9efc4bc0a74d42269a180e6d403880b4 439 PRINTS PR00688 Xylose isomerase signature 209 228 4.6E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 D172_007545 9efc4bc0a74d42269a180e6d403880b4 439 PRINTS PR00688 Xylose isomerase signature 94 116 4.6E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 D172_007545 9efc4bc0a74d42269a180e6d403880b4 439 PRINTS PR00688 Xylose isomerase signature 335 346 4.6E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 D172_007545 9efc4bc0a74d42269a180e6d403880b4 439 PRINTS PR00688 Xylose isomerase signature 273 300 4.6E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 D172_007545 9efc4bc0a74d42269a180e6d403880b4 439 PRINTS PR00688 Xylose isomerase signature 158 177 4.6E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 D172_007545 9efc4bc0a74d42269a180e6d403880b4 439 PRINTS PR00688 Xylose isomerase signature 182 203 4.6E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 D172_007545 9efc4bc0a74d42269a180e6d403880b4 439 PRINTS PR00688 Xylose isomerase signature 231 255 4.6E-84 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 D172_007545 9efc4bc0a74d42269a180e6d403880b4 439 Hamap MF_00455 Xylose isomerase [xylA]. 12 439 51.223 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 D172_007545 9efc4bc0a74d42269a180e6d403880b4 439 Gene3D G3DSA:3.20.20.150 3 439 1.0E-181 T 14-10-2018 D172_017875 ce2898548da6b32370ff452d9ef2d268 167 Gene3D G3DSA:3.40.630.30 1 161 4.7E-29 T 14-10-2018 D172_017875 ce2898548da6b32370ff452d9ef2d268 167 SUPERFAMILY SSF55729 1 161 7.57E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_017875 ce2898548da6b32370ff452d9ef2d268 167 Pfam PF13302 Acetyltransferase (GNAT) domain 12 143 3.9E-17 T 14-10-2018 IPR000182 GNAT domain D172_004210 4da34054af7bec853a1d630a0795c5a2 558 Pfam PF07969 Amidohydrolase family 73 545 2.0E-101 T 14-10-2018 IPR013108 Amidohydrolase 3 D172_004210 4da34054af7bec853a1d630a0795c5a2 558 Gene3D G3DSA:3.20.20.140 84 508 2.1E-146 T 14-10-2018 D172_004210 4da34054af7bec853a1d630a0795c5a2 558 SUPERFAMILY SSF51556 83 509 6.01E-36 T 14-10-2018 IPR032466 Metal-dependent hydrolase D172_004210 4da34054af7bec853a1d630a0795c5a2 558 Gene3D G3DSA:2.30.40.10 43 525 2.1E-146 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D172_004210 4da34054af7bec853a1d630a0795c5a2 558 SUPERFAMILY SSF51338 28 550 4.32E-14 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D172_004210 4da34054af7bec853a1d630a0795c5a2 558 Gene3D G3DSA:3.10.310.70 102 217 2.1E-146 T 14-10-2018 D172_015640 892134a22f718a69a60f061c9e8b2f06 479 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 240 364 3.1E-10 T 14-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain D172_015640 892134a22f718a69a60f061c9e8b2f06 479 Pfam PF17482 Phage tail sheath C-terminal domain 368 472 2.4E-13 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain D172_016585 fcf05bbe86fa042ba5f568ae2077fcd4 246 Pfam PF02104 SURF1 family 22 227 3.1E-27 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_020815 c3f8a538980186d153e81931d2f00e89 129 Gene3D G3DSA:3.30.460.10 1 112 3.4E-16 T 14-10-2018 D172_020815 c3f8a538980186d153e81931d2f00e89 129 Pfam PF01909 Nucleotidyltransferase domain 6 81 1.3E-10 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 D172_020815 c3f8a538980186d153e81931d2f00e89 129 SUPERFAMILY SSF81301 4 108 1.57E-15 T 14-10-2018 D172_016700 7a618e7c72670e18f16c4a31b0731dc1 358 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 8 348 6.3E-155 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 D172_016700 7a618e7c72670e18f16c4a31b0731dc1 358 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 8 352 1.7E-128 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 D172_016700 7a618e7c72670e18f16c4a31b0731dc1 358 SUPERFAMILY SSF53659 4 358 2.88E-120 T 14-10-2018 D172_016700 7a618e7c72670e18f16c4a31b0731dc1 358 SMART SM01329 7 354 3.1E-195 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 D172_016700 7a618e7c72670e18f16c4a31b0731dc1 358 Gene3D G3DSA:3.40.718.10 1 358 4.3E-148 T 14-10-2018 D172_016700 7a618e7c72670e18f16c4a31b0731dc1 358 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 358 49.978 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 D172_016700 7a618e7c72670e18f16c4a31b0731dc1 358 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 D172_016225 c1d94e5e8e832254a20b7431a6e80765 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 6 59 4.9E-26 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_016225 c1d94e5e8e832254a20b7431a6e80765 60 SUPERFAMILY SSF55129 4 59 2.09E-21 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily D172_016225 c1d94e5e8e832254a20b7431a6e80765 60 Pfam PF00327 Ribosomal protein L30p/L7e 6 56 5.5E-21 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain D172_016225 c1d94e5e8e832254a20b7431a6e80765 60 ProSitePatterns PS00634 Ribosomal protein L30 signature. 24 56 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site D172_016225 c1d94e5e8e832254a20b7431a6e80765 60 Gene3D G3DSA:3.30.1390.20 1 59 1.0E-26 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily D172_016225 c1d94e5e8e832254a20b7431a6e80765 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 60 21.321 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_016225 c1d94e5e8e832254a20b7431a6e80765 60 PIRSF PIRSF002211 1 60 6.1E-28 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_008115 c6bb6044000c18dc82de93cc021967ec 423 SUPERFAMILY SSF55785 148 254 4.19E-9 T 14-10-2018 IPR035965 PAS domain superfamily D172_008115 c6bb6044000c18dc82de93cc021967ec 423 Pfam PF00990 Diguanylate cyclase, GGDEF domain 257 416 6.1E-47 T 14-10-2018 IPR000160 GGDEF domain D172_008115 c6bb6044000c18dc82de93cc021967ec 423 Gene3D G3DSA:3.30.70.270 247 421 3.3E-54 T 14-10-2018 D172_008115 c6bb6044000c18dc82de93cc021967ec 423 SMART SM00267 246 421 2.1E-58 T 14-10-2018 IPR000160 GGDEF domain D172_008115 c6bb6044000c18dc82de93cc021967ec 423 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 130 251 8.0E-7 T 14-10-2018 IPR000014 PAS domain D172_008115 c6bb6044000c18dc82de93cc021967ec 423 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 420 4.6E-51 T 14-10-2018 IPR000160 GGDEF domain D172_008115 c6bb6044000c18dc82de93cc021967ec 423 Gene3D G3DSA:3.30.450.20 124 246 1.4E-8 T 14-10-2018 D172_008115 c6bb6044000c18dc82de93cc021967ec 423 SUPERFAMILY SSF55073 262 420 6.67E-45 T 14-10-2018 IPR029787 Nucleotide cyclase D172_003520 9e0c1d1dcb5796be274821238258942b 421 SUPERFAMILY SSF81342 7 285 2.04E-93 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 D172_003520 9e0c1d1dcb5796be274821238258942b 421 SUPERFAMILY SSF81648 205 391 8.5E-47 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 D172_003520 9e0c1d1dcb5796be274821238258942b 421 Pfam PF00033 Cytochrome b/b6/petB 25 212 8.5E-65 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 D172_003520 9e0c1d1dcb5796be274821238258942b 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 296 397 5.6E-42 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 D172_003520 9e0c1d1dcb5796be274821238258942b 421 Gene3D G3DSA:1.20.810.10 2 421 2.7E-150 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 D172_003520 9e0c1d1dcb5796be274821238258942b 421 PIRSF PIRSF038885 1 421 1.2E-156 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 D172_008455 0f812f0d94df3768603b59c91ad47f75 262 Pfam PF00005 ABC transporter 38 180 3.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_008455 0f812f0d94df3768603b59c91ad47f75 262 SMART SM00382 46 228 2.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_008455 0f812f0d94df3768603b59c91ad47f75 262 Gene3D G3DSA:3.40.50.300 9 261 2.3E-63 T 14-10-2018 D172_008455 0f812f0d94df3768603b59c91ad47f75 262 SUPERFAMILY SSF52540 34 242 1.44E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_016340 8d5f641d4e418dae4bd05fe63903ec43 181 Pfam PF03703 Bacterial PH domain 62 131 5.6E-16 T 14-10-2018 IPR005182 Domain of unknown function DUF304 D172_010095 7da8eb0c1d9179b2d0aba9b67884c009 422 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 31 409 2.6E-93 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 D172_010095 7da8eb0c1d9179b2d0aba9b67884c009 422 SUPERFAMILY SSF53659 4 421 1.17E-120 T 14-10-2018 D172_010095 7da8eb0c1d9179b2d0aba9b67884c009 422 Gene3D G3DSA:3.40.718.10 1 422 6.5E-147 T 14-10-2018 D172_010095 7da8eb0c1d9179b2d0aba9b67884c009 422 SMART SM01329 30 418 5.5E-140 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 D172_018410 7daab14a755f58f63977e26b3d2c743f 277 SUPERFAMILY SSF56349 4 262 1.12E-49 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D172_018410 7daab14a755f58f63977e26b3d2c743f 277 Pfam PF00589 Phage integrase family 100 259 7.7E-39 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D172_018410 7daab14a755f58f63977e26b3d2c743f 277 Gene3D G3DSA:1.10.150.130 2 90 7.1E-15 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal D172_018410 7daab14a755f58f63977e26b3d2c743f 277 Gene3D G3DSA:1.10.443.10 92 265 2.6E-49 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D172_018410 7daab14a755f58f63977e26b3d2c743f 277 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 4 84 4.5E-11 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D172_016320 ca382d37539b48e4e0b4672178d79e1c 102 SUPERFAMILY SSF46785 9 97 7.92E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_016320 ca382d37539b48e4e0b4672178d79e1c 102 Pfam PF01022 Bacterial regulatory protein, arsR family 24 66 1.4E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D172_016320 ca382d37539b48e4e0b4672178d79e1c 102 Gene3D G3DSA:1.10.10.10 2 102 7.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_016320 ca382d37539b48e4e0b4672178d79e1c 102 SMART SM00418 15 93 3.3E-23 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D172_016320 ca382d37539b48e4e0b4672178d79e1c 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 8.1E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D172_016320 ca382d37539b48e4e0b4672178d79e1c 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 8.1E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D172_016320 ca382d37539b48e4e0b4672178d79e1c 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 8.1E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 D172_020150 2abf9a6e20c7c27996d68063957099d0 112 Pfam PF12472 Phage related protein 67 103 2.1E-5 T 14-10-2018 IPR021096 Vibrio phage VSK, Orf152 D172_006350 c919955208113e049cad8aa3907292b0 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 11 311 2.4E-131 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 D172_006350 c919955208113e049cad8aa3907292b0 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 D172_006350 c919955208113e049cad8aa3907292b0 322 Gene3D G3DSA:3.40.50.1100 12 306 1.1E-124 T 14-10-2018 D172_006350 c919955208113e049cad8aa3907292b0 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 10 311 5.8E-138 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 D172_006350 c919955208113e049cad8aa3907292b0 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 2.6E-67 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D172_006350 c919955208113e049cad8aa3907292b0 322 SUPERFAMILY SSF53686 4 317 6.29E-94 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D172_006350 c919955208113e049cad8aa3907292b0 322 Gene3D G3DSA:3.40.50.1100 43 145 1.1E-124 T 14-10-2018 D172_004040 382a7a96abdd2e096a98a31db61e453a 329 Pfam PF00487 Fatty acid desaturase 61 318 2.7E-21 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 D172_005635 0605e767c5d8c1cf72187340da1fcfa1 396 Pfam PF00155 Aminotransferase class I and II 27 390 5.4E-74 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D172_005635 0605e767c5d8c1cf72187340da1fcfa1 396 PRINTS PR00799 Aspartate aminotransferase signature 272 297 2.2E-32 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 D172_005635 0605e767c5d8c1cf72187340da1fcfa1 396 PRINTS PR00799 Aspartate aminotransferase signature 174 193 2.2E-32 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 D172_005635 0605e767c5d8c1cf72187340da1fcfa1 396 PRINTS PR00799 Aspartate aminotransferase signature 205 217 2.2E-32 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 D172_005635 0605e767c5d8c1cf72187340da1fcfa1 396 PRINTS PR00799 Aspartate aminotransferase signature 340 358 2.2E-32 T 14-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 D172_005635 0605e767c5d8c1cf72187340da1fcfa1 396 SUPERFAMILY SSF53383 1 396 1.88E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_005635 0605e767c5d8c1cf72187340da1fcfa1 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 242 255 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 D172_005635 0605e767c5d8c1cf72187340da1fcfa1 396 Gene3D G3DSA:3.40.640.10 60 299 3.7E-150 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_005635 0605e767c5d8c1cf72187340da1fcfa1 396 Gene3D G3DSA:3.90.1150.10 6 391 3.7E-150 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_001850 375e87bba2852edf3595bece300f05d4 525 Gene3D G3DSA:3.30.750.170 76 429 9.2E-65 T 14-10-2018 D172_001850 375e87bba2852edf3595bece300f05d4 525 Gene3D G3DSA:3.90.226.10 233 474 9.2E-65 T 14-10-2018 D172_001850 375e87bba2852edf3595bece300f05d4 525 SUPERFAMILY SSF50156 137 226 3.09E-5 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 D172_001850 375e87bba2852edf3595bece300f05d4 525 SUPERFAMILY SSF52096 116 443 1.82E-29 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_001850 375e87bba2852edf3595bece300f05d4 525 Pfam PF03572 Peptidase family S41 248 401 1.0E-15 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D172_001850 375e87bba2852edf3595bece300f05d4 525 Gene3D G3DSA:2.30.42.10 128 232 9.2E-65 T 14-10-2018 D172_007670 d103c2c45039d3e97f1b56c38fc4b819 623 SUPERFAMILY SSF69318 61 287 1.23E-24 T 14-10-2018 D172_007670 d103c2c45039d3e97f1b56c38fc4b819 623 SUPERFAMILY SSF69318 267 541 3.66E-14 T 14-10-2018 D172_007670 d103c2c45039d3e97f1b56c38fc4b819 623 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 64 120 6.0E-8 T 14-10-2018 D172_007670 d103c2c45039d3e97f1b56c38fc4b819 623 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 222 283 8.3E-9 T 14-10-2018 D172_007670 d103c2c45039d3e97f1b56c38fc4b819 623 Pfam PF07593 ASPIC and UnbV 555 609 3.4E-7 T 14-10-2018 IPR011519 ASPIC/UnbV D172_013400 8c17609a1436543a05cd751c96c52884 176 Pfam PF03748 Flagellar basal body-associated protein FliL 75 176 1.4E-20 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 D172_007290 92dc4ee68ccadb89cfd8e60ecefde562 496 SUPERFAMILY SSF52091 392 484 3.53E-13 T 14-10-2018 IPR036513 STAS domain superfamily D172_007290 92dc4ee68ccadb89cfd8e60ecefde562 496 Gene3D G3DSA:3.30.750.24 387 484 4.6E-27 T 14-10-2018 IPR036513 STAS domain superfamily D172_007290 92dc4ee68ccadb89cfd8e60ecefde562 496 ProSitePatterns PS01130 SLC26A transporters signature. 42 63 - T 14-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 D172_007290 92dc4ee68ccadb89cfd8e60ecefde562 496 Pfam PF01740 STAS domain 403 485 8.2E-9 T 14-10-2018 IPR002645 STAS domain D172_007290 92dc4ee68ccadb89cfd8e60ecefde562 496 Pfam PF00916 Sulfate permease family 14 143 4.8E-29 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 D172_007290 92dc4ee68ccadb89cfd8e60ecefde562 496 Pfam PF00916 Sulfate permease family 168 345 3.5E-27 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 D172_009470 a62cdb57b1f8ea158110e6c6effc1462 369 SMART SM00922 151 248 2.3E-23 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal D172_009470 a62cdb57b1f8ea158110e6c6effc1462 369 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 36 132 1.9E-15 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain D172_009470 a62cdb57b1f8ea158110e6c6effc1462 369 Pfam PF13378 Enolase C-terminal domain-like 163 359 2.1E-55 T 14-10-2018 IPR029065 Enolase C-terminal domain-like D172_009470 a62cdb57b1f8ea158110e6c6effc1462 369 Gene3D G3DSA:3.30.390.10 7 129 3.3E-28 T 14-10-2018 IPR029017 Enolase-like, N-terminal D172_009470 a62cdb57b1f8ea158110e6c6effc1462 369 SUPERFAMILY SSF54826 7 133 1.48E-31 T 14-10-2018 D172_009470 a62cdb57b1f8ea158110e6c6effc1462 369 SUPERFAMILY SSF51604 121 367 4.32E-67 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily D172_009470 a62cdb57b1f8ea158110e6c6effc1462 369 Gene3D G3DSA:3.20.20.120 130 357 5.3E-74 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily D172_002310 2bf5e047c0fe46f3d3c4dde8986bef83 294 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 150 167 2.3E-25 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial D172_002310 2bf5e047c0fe46f3d3c4dde8986bef83 294 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 230 245 2.3E-25 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial D172_002310 2bf5e047c0fe46f3d3c4dde8986bef83 294 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 207 217 2.3E-25 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial D172_002310 2bf5e047c0fe46f3d3c4dde8986bef83 294 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 218 229 2.3E-25 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial D172_002310 2bf5e047c0fe46f3d3c4dde8986bef83 294 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 22 130 9.0E-34 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal D172_002310 2bf5e047c0fe46f3d3c4dde8986bef83 294 Pfam PF01478 Type IV leader peptidase family 142 250 2.5E-23 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 D172_010945 0ce5b8ca44d9169c8452465b64d808c1 417 Pfam PF13437 HlyD family secretion protein 239 330 1.6E-12 T 14-10-2018 D172_010945 0ce5b8ca44d9169c8452465b64d808c1 417 Pfam PF13533 Biotin-lipoyl like 92 123 2.0E-5 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain D172_010945 0ce5b8ca44d9169c8452465b64d808c1 417 Gene3D G3DSA:1.10.287.470 111 238 3.6E-37 T 14-10-2018 D172_010945 0ce5b8ca44d9169c8452465b64d808c1 417 Gene3D G3DSA:2.40.30.170 67 344 3.6E-37 T 14-10-2018 D172_010945 0ce5b8ca44d9169c8452465b64d808c1 417 Gene3D G3DSA:2.40.50.100 78 273 3.6E-37 T 14-10-2018 D172_010945 0ce5b8ca44d9169c8452465b64d808c1 417 Gene3D G3DSA:2.40.420.20 66 402 3.6E-37 T 14-10-2018 D172_004585 119de7f66a919d97977f211f83d6ed65 281 SMART SM00382 25 187 2.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_004585 119de7f66a919d97977f211f83d6ed65 281 SUPERFAMILY SSF52540 7 273 1.14E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_004585 119de7f66a919d97977f211f83d6ed65 281 Gene3D G3DSA:3.40.50.300 10 194 1.4E-27 T 14-10-2018 D172_004585 119de7f66a919d97977f211f83d6ed65 281 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 177 9.2E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D172_015210 e483d96ec5eb3aa5dbe9a41d49ae8afa 354 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 139 320 1.9E-9 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 D172_015210 e483d96ec5eb3aa5dbe9a41d49ae8afa 354 PIRSF PIRSF028458 13 354 7.5E-113 T 14-10-2018 IPR016886 Predicted glycerophosphotransferase UCP028458 D172_015210 e483d96ec5eb3aa5dbe9a41d49ae8afa 354 Gene3D G3DSA:3.40.50.12580 151 302 5.4E-10 T 14-10-2018 D172_015210 e483d96ec5eb3aa5dbe9a41d49ae8afa 354 SUPERFAMILY SSF53756 22 324 1.15E-19 T 14-10-2018 D172_003425 e043cb18b564325fe9e6fe7fd39aaa54 180 Pfam PF03968 OstA-like protein 36 147 1.8E-22 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal D172_003425 e043cb18b564325fe9e6fe7fd39aaa54 180 Gene3D G3DSA:2.60.450.10 29 165 1.4E-31 T 14-10-2018 D172_003425 e043cb18b564325fe9e6fe7fd39aaa54 180 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 30 167 3.1E-39 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 D172_019580 a3316e1c290a13de334dc53b87240ff3 492 SMART SM00495 445 488 4.4E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 D172_019580 a3316e1c290a13de334dc53b87240ff3 492 Gene3D G3DSA:2.10.10.20 431 492 6.9E-17 T 14-10-2018 D172_019580 a3316e1c290a13de334dc53b87240ff3 492 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 160 169 - T 14-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 D172_019580 a3316e1c290a13de334dc53b87240ff3 492 SUPERFAMILY SSF51055 434 492 2.35E-11 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 D172_019580 a3316e1c290a13de334dc53b87240ff3 492 Pfam PF02412 Thrombospondin type 3 repeat 397 416 0.0061 T 14-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 D172_019580 a3316e1c290a13de334dc53b87240ff3 492 Pfam PF02412 Thrombospondin type 3 repeat 358 379 0.0024 T 14-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 D172_019580 a3316e1c290a13de334dc53b87240ff3 492 SUPERFAMILY SSF51445 34 323 7.05E-81 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_019580 a3316e1c290a13de334dc53b87240ff3 492 Pfam PF14600 Cellulose-binding domain 432 492 4.9E-27 T 14-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 D172_019580 a3316e1c290a13de334dc53b87240ff3 492 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 48 293 1.1E-56 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 D172_019580 a3316e1c290a13de334dc53b87240ff3 492 Gene3D G3DSA:3.20.20.80 33 325 1.8E-94 T 14-10-2018 D172_019580 a3316e1c290a13de334dc53b87240ff3 492 SUPERFAMILY SSF103647 327 419 3.4E-19 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 D172_014215 7dce4c5a50527abcba6700ecd63ca2cf 816 Pfam PF11739 Dicarboxylate transport 612 806 9.9E-47 T 14-10-2018 IPR021730 Dicarboxylate transport D172_017515 b786dff74b20c07181e08ca39a82ab94 657 Gene3D G3DSA:3.30.200.20 29 121 5.0E-21 T 14-10-2018 D172_017515 b786dff74b20c07181e08ca39a82ab94 657 SUPERFAMILY SSF56112 34 295 2.02E-56 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily D172_017515 b786dff74b20c07181e08ca39a82ab94 657 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 167 179 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 D172_017515 b786dff74b20c07181e08ca39a82ab94 657 Pfam PF00069 Protein kinase domain 42 261 1.2E-39 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 D172_017515 b786dff74b20c07181e08ca39a82ab94 657 Gene3D G3DSA:1.10.510.10 122 309 3.4E-36 T 14-10-2018 D172_017515 b786dff74b20c07181e08ca39a82ab94 657 SMART SM00220 40 312 1.2E-32 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 D172_019600 467da6e881b17059025c900d575df07a 207 Gene3D G3DSA:1.10.10.10 137 206 5.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_019600 467da6e881b17059025c900d575df07a 207 SUPERFAMILY SSF88946 24 127 1.61E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D172_019600 467da6e881b17059025c900d575df07a 207 SUPERFAMILY SSF88659 137 203 6.54E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_019600 467da6e881b17059025c900d575df07a 207 Gene3D G3DSA:1.10.1740.10 28 111 6.3E-20 T 14-10-2018 D172_019600 467da6e881b17059025c900d575df07a 207 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 43 202 7.8E-28 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D172_019600 467da6e881b17059025c900d575df07a 207 Pfam PF04542 Sigma-70 region 2 47 113 9.6E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D172_019600 467da6e881b17059025c900d575df07a 207 Pfam PF04545 Sigma-70, region 4 152 200 2.3E-13 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 D172_009855 a0cd676514e189d65cae50c9df26145a 540 SUPERFAMILY SSF51011 467 537 2.94E-10 T 14-10-2018 D172_009855 a0cd676514e189d65cae50c9df26145a 540 Gene3D G3DSA:3.20.20.80 6 459 1.5E-181 T 14-10-2018 D172_009855 a0cd676514e189d65cae50c9df26145a 540 Pfam PF16657 Maltogenic Amylase, C-terminal domain 467 536 7.1E-9 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal D172_009855 a0cd676514e189d65cae50c9df26145a 540 SMART SM00642 14 404 3.6E-117 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D172_009855 a0cd676514e189d65cae50c9df26145a 540 Gene3D G3DSA:3.90.400.10 106 176 1.5E-181 T 14-10-2018 D172_009855 a0cd676514e189d65cae50c9df26145a 540 SUPERFAMILY SSF51445 4 464 4.81E-132 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_009855 a0cd676514e189d65cae50c9df26145a 540 Gene3D G3DSA:2.60.40.1180 468 540 8.7E-8 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta D172_009855 a0cd676514e189d65cae50c9df26145a 540 Pfam PF00128 Alpha amylase, catalytic domain 29 376 2.9E-93 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D172_014415 f9f5b9bfafa6567e04d147aa2a530a67 314 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 14 242 1.4E-37 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 D172_014415 f9f5b9bfafa6567e04d147aa2a530a67 314 SUPERFAMILY SSF52374 12 293 1.66E-74 T 14-10-2018 D172_014415 f9f5b9bfafa6567e04d147aa2a530a67 314 PRINTS PR00987 Glutamyl-tRNA synthetase signature 193 201 1.1E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D172_014415 f9f5b9bfafa6567e04d147aa2a530a67 314 PRINTS PR00987 Glutamyl-tRNA synthetase signature 16 28 1.1E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D172_014415 f9f5b9bfafa6567e04d147aa2a530a67 314 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 58 1.1E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D172_014415 f9f5b9bfafa6567e04d147aa2a530a67 314 PRINTS PR00987 Glutamyl-tRNA synthetase signature 177 187 1.1E-10 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 D172_014415 f9f5b9bfafa6567e04d147aa2a530a67 314 Gene3D G3DSA:3.40.50.620 88 225 1.9E-100 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_014415 f9f5b9bfafa6567e04d147aa2a530a67 314 Gene3D G3DSA:3.40.50.620 13 291 1.9E-100 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_014415 f9f5b9bfafa6567e04d147aa2a530a67 314 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 13 276 1.1E-103 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 D172_014415 f9f5b9bfafa6567e04d147aa2a530a67 314 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 13 297 37.109 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 D172_006840 65eb3009dd095dc95b8a733cb01c5233 223 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 212 1.4E-54 T 14-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain D172_016770 92c3473aac72c1eb6fc15484aa132222 84 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 67 2.0E-31 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 D172_016770 92c3473aac72c1eb6fc15484aa132222 84 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 2.8E-31 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 D172_016770 92c3473aac72c1eb6fc15484aa132222 84 Gene3D G3DSA:1.10.10.610 1 76 2.4E-27 T 14-10-2018 IPR036685 YehU-like superfamily D172_016770 92c3473aac72c1eb6fc15484aa132222 84 SUPERFAMILY SSF118001 1 71 3.53E-27 T 14-10-2018 IPR036685 YehU-like superfamily D172_016770 92c3473aac72c1eb6fc15484aa132222 84 PIRSF PIRSF006169 1 76 1.2E-31 T 14-10-2018 IPR010648 Uncharacterised protein family UPF0270 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 Gene3D G3DSA:1.10.274.10 194 318 2.5E-58 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 Gene3D G3DSA:3.30.450.40 1 165 2.2E-44 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_013675 7f7ee14f8e6dea6198386f814569f676 754 Pfam PF01590 GAF domain 20 153 4.5E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 428 712 1.7E-87 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 Gene3D G3DSA:3.20.20.60 405 746 6.6E-96 T 14-10-2018 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 Pfam PF00391 PEP-utilising enzyme, mobile domain 324 396 1.3E-15 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 736 3.9E-128 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 SUPERFAMILY SSF55781 2 160 6.76E-29 T 14-10-2018 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 Pfam PF05524 PEP-utilising enzyme, N-terminal 176 298 2.6E-19 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 483 1.4E-21 T 14-10-2018 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 619 634 1.4E-21 T 14-10-2018 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 636 651 1.4E-21 T 14-10-2018 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 672 684 1.4E-21 T 14-10-2018 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 SUPERFAMILY SSF51621 428 720 8.38E-88 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 SUPERFAMILY SSF52009 297 415 1.83E-28 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 Gene3D G3DSA:3.50.30.10 177 404 2.5E-58 T 14-10-2018 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 SMART SM00065 17 164 9.2E-18 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_013675 7f7ee14f8e6dea6198386f814569f676 754 SUPERFAMILY SSF47831 204 315 3.92E-24 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 D172_014130 0dc3445102b77e905bca494192495b9b 132 Pfam PF03748 Flagellar basal body-associated protein FliL 29 130 6.3E-17 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 D172_001915 9c0e25b17a26133ea12fb1accdc5acb5 458 SUPERFAMILY SSF56954 8 439 2.35E-52 T 14-10-2018 D172_001915 9c0e25b17a26133ea12fb1accdc5acb5 458 Pfam PF02321 Outer membrane efflux protein 46 229 2.2E-18 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D172_001915 9c0e25b17a26133ea12fb1accdc5acb5 458 Pfam PF02321 Outer membrane efflux protein 259 438 2.5E-17 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D172_001915 9c0e25b17a26133ea12fb1accdc5acb5 458 Gene3D G3DSA:1.20.1600.10 36 440 2.0E-48 T 14-10-2018 D172_002690 2f1728dcac3cf16b4f2c8823a6c35311 147 Pfam PF14467 Domain of unknown function (DUF4426) 30 147 3.5E-48 T 14-10-2018 IPR025218 Domain of unknown function DUF4426 D172_002690 2f1728dcac3cf16b4f2c8823a6c35311 147 Gene3D G3DSA:2.60.40.3340 19 147 3.9E-41 T 14-10-2018 D172_005365 e31ef2835e9e74ce36755cdfc6a9a04a 748 Pfam PF03170 Bacterial cellulose synthase subunit 47 649 5.4E-184 T 14-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 D172_005365 e31ef2835e9e74ce36755cdfc6a9a04a 748 PRINTS PR01440 Cellulose synthase subunit B signature 163 184 1.2E-30 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 D172_005365 e31ef2835e9e74ce36755cdfc6a9a04a 748 PRINTS PR01440 Cellulose synthase subunit B signature 369 390 1.2E-30 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 D172_005365 e31ef2835e9e74ce36755cdfc6a9a04a 748 PRINTS PR01440 Cellulose synthase subunit B signature 286 307 1.2E-30 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 D172_005365 e31ef2835e9e74ce36755cdfc6a9a04a 748 PRINTS PR01440 Cellulose synthase subunit B signature 501 520 1.2E-30 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 D172_005365 e31ef2835e9e74ce36755cdfc6a9a04a 748 PRINTS PR01440 Cellulose synthase subunit B signature 538 558 1.2E-30 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 D172_005365 e31ef2835e9e74ce36755cdfc6a9a04a 748 PRINTS PR01440 Cellulose synthase subunit B signature 453 472 1.2E-30 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 D172_005365 e31ef2835e9e74ce36755cdfc6a9a04a 748 PRINTS PR01440 Cellulose synthase subunit B signature 205 228 1.2E-30 T 14-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 D172_005365 e31ef2835e9e74ce36755cdfc6a9a04a 748 Gene3D G3DSA:2.60.120.260 335 493 1.2E-15 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_005365 e31ef2835e9e74ce36755cdfc6a9a04a 748 Gene3D G3DSA:2.60.120.260 45 177 2.0E-19 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_002845 d878f4024741ec2038cf5d191d616cae 567 Pfam PF01103 Surface antigen 184 555 1.3E-6 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 D172_002845 d878f4024741ec2038cf5d191d616cae 567 Gene3D G3DSA:2.40.160.50 130 566 1.1E-21 T 14-10-2018 D172_007265 b56964a4795c7d15e47be36a580daba2 135 PIRSF PIRSF018297 2 129 8.3E-36 T 14-10-2018 IPR006440 Death on curing protein GO:0016301 D172_007265 b56964a4795c7d15e47be36a580daba2 135 Gene3D G3DSA:1.20.120.1870 5 135 8.8E-30 T 14-10-2018 D172_007265 b56964a4795c7d15e47be36a580daba2 135 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 9 121 1.6E-15 T 14-10-2018 IPR006440 Death on curing protein GO:0016301 D172_001240 a03c5dcf042d9d280ea9c714fd986229 232 Pfam PF03352 Methyladenine glycosylase 39 132 1.8E-15 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 D172_001240 a03c5dcf042d9d280ea9c714fd986229 232 SUPERFAMILY SSF48150 37 183 3.61E-40 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 D172_001240 a03c5dcf042d9d280ea9c714fd986229 232 Gene3D G3DSA:1.10.340.30 32 153 5.9E-19 T 14-10-2018 D172_015540 90ca272b323b1bb6c22e32692f21f904 569 Pfam PF07980 SusD family 288 569 8.2E-37 T 14-10-2018 IPR012944 RagB/SusD domain D172_015540 90ca272b323b1bb6c22e32692f21f904 569 Gene3D G3DSA:1.25.40.390 33 569 1.8E-123 T 14-10-2018 D172_015540 90ca272b323b1bb6c22e32692f21f904 569 Pfam PF14322 Starch-binding associating with outer membrane 114 234 5.6E-8 T 14-10-2018 IPR033985 SusD-like, N-terminal D172_015540 90ca272b323b1bb6c22e32692f21f904 569 SUPERFAMILY SSF48452 19 569 1.13E-95 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_002925 cf69a12c5a980a5ba2da3a21d5418deb 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 D172_002925 cf69a12c5a980a5ba2da3a21d5418deb 316 Gene3D G3DSA:3.20.20.70 1 316 2.5E-122 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_002925 cf69a12c5a980a5ba2da3a21d5418deb 316 TIGRFAM TIGR00874 talAB: transaldolase 4 311 2.1E-132 T 14-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 D172_002925 cf69a12c5a980a5ba2da3a21d5418deb 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 D172_002925 cf69a12c5a980a5ba2da3a21d5418deb 316 SUPERFAMILY SSF51569 1 314 7.64E-106 T 14-10-2018 D172_002925 cf69a12c5a980a5ba2da3a21d5418deb 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 311 3.6E-94 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 D172_009820 ff0db2509a8f92e16a60605d8566e842 894 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 162 1.9E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_009820 ff0db2509a8f92e16a60605d8566e842 894 Gene3D G3DSA:2.40.170.20 337 894 7.1E-51 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_009820 ff0db2509a8f92e16a60605d8566e842 894 Gene3D G3DSA:2.40.170.20 47 274 1.2E-47 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_009820 ff0db2509a8f92e16a60605d8566e842 894 Pfam PF00593 TonB dependent receptor 310 892 1.1E-30 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_009820 ff0db2509a8f92e16a60605d8566e842 894 SUPERFAMILY SSF56935 37 894 9.62E-97 T 14-10-2018 D172_000530 28dd9049ce187d7de8bbfc1f399c3658 160 Pfam PF01047 MarR family 31 89 3.8E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_000530 28dd9049ce187d7de8bbfc1f399c3658 160 Gene3D G3DSA:1.10.10.10 1 137 1.0E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_000530 28dd9049ce187d7de8bbfc1f399c3658 160 SUPERFAMILY SSF46785 2 139 5.94E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_000530 28dd9049ce187d7de8bbfc1f399c3658 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 1.6E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_000530 28dd9049ce187d7de8bbfc1f399c3658 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 1.6E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_000530 28dd9049ce187d7de8bbfc1f399c3658 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 1.6E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_000530 28dd9049ce187d7de8bbfc1f399c3658 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 1.6E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_000530 28dd9049ce187d7de8bbfc1f399c3658 160 SMART SM00347 24 124 1.7E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_019240 5cc61826203d046c16c6e7a9b191893d 295 Gene3D G3DSA:1.10.10.10 6 92 4.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_019240 5cc61826203d046c16c6e7a9b191893d 295 Pfam PF03466 LysR substrate binding domain 91 292 8.9E-38 T 14-10-2018 IPR005119 LysR, substrate-binding D172_019240 5cc61826203d046c16c6e7a9b191893d 295 Gene3D G3DSA:3.40.190.10 94 289 6.0E-56 T 14-10-2018 D172_019240 5cc61826203d046c16c6e7a9b191893d 295 SUPERFAMILY SSF46785 8 84 4.57E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_019240 5cc61826203d046c16c6e7a9b191893d 295 Gene3D G3DSA:3.40.190.10 166 264 6.0E-56 T 14-10-2018 D172_019240 5cc61826203d046c16c6e7a9b191893d 295 SUPERFAMILY SSF53850 93 293 1.13E-37 T 14-10-2018 D172_019240 5cc61826203d046c16c6e7a9b191893d 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 5.6E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_017735 98962bcd3fc299fde8b7f79079aa7764 503 ProSitePatterns PS00927 Trehalase signature 1. 109 122 - T 14-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 D172_017735 98962bcd3fc299fde8b7f79079aa7764 503 PRINTS PR00744 Glycosyl hydrolase family 37 signature 266 283 1.3E-38 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 D172_017735 98962bcd3fc299fde8b7f79079aa7764 503 PRINTS PR00744 Glycosyl hydrolase family 37 signature 482 495 1.3E-38 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 D172_017735 98962bcd3fc299fde8b7f79079aa7764 503 PRINTS PR00744 Glycosyl hydrolase family 37 signature 405 421 1.3E-38 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 D172_017735 98962bcd3fc299fde8b7f79079aa7764 503 PRINTS PR00744 Glycosyl hydrolase family 37 signature 298 315 1.3E-38 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 D172_017735 98962bcd3fc299fde8b7f79079aa7764 503 PRINTS PR00744 Glycosyl hydrolase family 37 signature 151 169 1.3E-38 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 D172_017735 98962bcd3fc299fde8b7f79079aa7764 503 PRINTS PR00744 Glycosyl hydrolase family 37 signature 341 357 1.3E-38 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 D172_017735 98962bcd3fc299fde8b7f79079aa7764 503 ProSitePatterns PS00928 Trehalase signature 2. 412 421 - T 14-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 D172_017735 98962bcd3fc299fde8b7f79079aa7764 503 Gene3D G3DSA:1.50.10.10 1 502 1.1E-169 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 D172_017735 98962bcd3fc299fde8b7f79079aa7764 503 Pfam PF01204 Trehalase 52 498 1.4E-136 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 D172_017735 98962bcd3fc299fde8b7f79079aa7764 503 SUPERFAMILY SSF48208 3 495 1.28E-144 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 D172_016750 90e2453c09f6451dc1342444a05b7000 67 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 3 60 1.1E-25 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 D172_016750 90e2453c09f6451dc1342444a05b7000 67 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 55 5.6E-18 T 14-10-2018 IPR012658 Conserved hypothetical protein CHP02443 D172_000745 233446f6063c6e6edfa903fcf8c28a0d 203 Gene3D G3DSA:3.30.450.40 38 202 6.4E-17 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_000745 233446f6063c6e6edfa903fcf8c28a0d 203 Pfam PF04340 Protein of unknown function, DUF484 2 190 3.4E-29 T 14-10-2018 IPR007435 Protein of unknown function DUF484 D172_001185 555adabb93639aada4fc44193666e6ed 363 SUPERFAMILY SSF56281 97 325 3.92E-26 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_001185 555adabb93639aada4fc44193666e6ed 363 Gene3D G3DSA:3.60.15.10 68 363 4.3E-61 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_001185 555adabb93639aada4fc44193666e6ed 363 Pfam PF12706 Beta-lactamase superfamily domain 115 318 6.4E-27 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_014195 cb7d7a0a4faf60356d0a9db44532260a 427 SUPERFAMILY SSF53756 57 423 1.73E-13 T 14-10-2018 D172_014195 cb7d7a0a4faf60356d0a9db44532260a 427 Gene3D G3DSA:3.40.50.2000 221 407 6.9E-59 T 14-10-2018 D172_014195 cb7d7a0a4faf60356d0a9db44532260a 427 Gene3D G3DSA:3.40.50.11720 34 213 2.8E-45 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 D172_014195 cb7d7a0a4faf60356d0a9db44532260a 427 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 215 4.6E-58 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 D172_018720 1915b0437fecfa278a127f34e5146a51 334 Gene3D G3DSA:3.40.640.10 1 244 1.7E-90 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_018720 1915b0437fecfa278a127f34e5146a51 334 Gene3D G3DSA:3.90.1150.10 245 334 6.0E-23 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_018720 1915b0437fecfa278a127f34e5146a51 334 SUPERFAMILY SSF53383 1 331 1.61E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_018720 1915b0437fecfa278a127f34e5146a51 334 Pfam PF01212 Beta-eliminating lyase 3 281 1.4E-89 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 D172_018720 1915b0437fecfa278a127f34e5146a51 334 PIRSF PIRSF017617 1 334 5.1E-129 T 14-10-2018 IPR023603 Threonine aldolase D172_000705 ddf8f559277a4e0c53dbbe1c83e46d5d 124 PIRSF PIRSF019455 1 124 1.1E-39 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 D172_000705 ddf8f559277a4e0c53dbbe1c83e46d5d 124 Gene3D G3DSA:1.10.4040.10 70 122 5.7E-14 T 14-10-2018 D172_000705 ddf8f559277a4e0c53dbbe1c83e46d5d 124 Gene3D G3DSA:1.10.10.10 2 69 2.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_000705 ddf8f559277a4e0c53dbbe1c83e46d5d 124 SUPERFAMILY SSF46785 1 122 4.03E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_000705 ddf8f559277a4e0c53dbbe1c83e46d5d 124 Pfam PF03965 Penicillinase repressor 4 117 5.8E-35 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 D172_015430 965af65d4d2ed172e5a03d5155d05069 272 SUPERFAMILY SSF82689 172 270 1.22E-34 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 D172_015430 965af65d4d2ed172e5a03d5155d05069 272 Gene3D G3DSA:2.30.30.60 120 169 1.6E-22 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily D172_015430 965af65d4d2ed172e5a03d5155d05069 272 Pfam PF05552 Conserved TM helix 6 54 1.1E-9 T 14-10-2018 IPR008910 Conserved TM helix D172_015430 965af65d4d2ed172e5a03d5155d05069 272 SUPERFAMILY SSF50182 105 170 1.96E-18 T 14-10-2018 IPR010920 LSM domain superfamily D172_015430 965af65d4d2ed172e5a03d5155d05069 272 Pfam PF00924 Mechanosensitive ion channel 62 259 1.3E-59 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 D172_015430 965af65d4d2ed172e5a03d5155d05069 272 SUPERFAMILY SSF82861 19 103 2.48E-18 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 D172_015430 965af65d4d2ed172e5a03d5155d05069 272 Gene3D G3DSA:3.30.70.100 170 264 2.8E-27 T 14-10-2018 D172_012185 3b031f326e78427d1d1d2c2c6e2bca1d 386 Gene3D G3DSA:2.60.410.10 280 370 4.4E-29 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D172_012185 3b031f326e78427d1d1d2c2c6e2bca1d 386 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 260 1.1E-88 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 D172_012185 3b031f326e78427d1d1d2c2c6e2bca1d 386 SMART SM00936 280 370 1.0E-35 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D172_012185 3b031f326e78427d1d1d2c2c6e2bca1d 386 SUPERFAMILY SSF69189 280 372 7.85E-26 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D172_012185 3b031f326e78427d1d1d2c2c6e2bca1d 386 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 370 1.6E-25 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D172_012185 3b031f326e78427d1d1d2c2c6e2bca1d 386 Gene3D G3DSA:3.40.710.10 23 279 1.7E-89 T 14-10-2018 D172_012185 3b031f326e78427d1d1d2c2c6e2bca1d 386 SUPERFAMILY SSF56601 7 280 3.94E-82 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D172_012185 3b031f326e78427d1d1d2c2c6e2bca1d 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 1.7E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 D172_012185 3b031f326e78427d1d1d2c2c6e2bca1d 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 1.7E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 D172_012185 3b031f326e78427d1d1d2c2c6e2bca1d 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 1.7E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 D172_015535 7120f78a4e33499814ed278765a29ef0 445 Pfam PF00083 Sugar (and other) transporter 8 431 5.5E-102 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 D172_015535 7120f78a4e33499814ed278765a29ef0 445 Gene3D G3DSA:1.20.1250.20 2 212 1.0E-53 T 14-10-2018 D172_015535 7120f78a4e33499814ed278765a29ef0 445 ProSitePatterns PS00217 Sugar transport proteins signature 2. 104 129 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D172_015535 7120f78a4e33499814ed278765a29ef0 445 Gene3D G3DSA:1.20.1250.20 217 439 1.1E-56 T 14-10-2018 D172_015535 7120f78a4e33499814ed278765a29ef0 445 PRINTS PR00171 Sugar transporter signature 335 356 4.7E-22 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_015535 7120f78a4e33499814ed278765a29ef0 445 PRINTS PR00171 Sugar transporter signature 250 260 4.7E-22 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_015535 7120f78a4e33499814ed278765a29ef0 445 PRINTS PR00171 Sugar transporter signature 358 370 4.7E-22 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_015535 7120f78a4e33499814ed278765a29ef0 445 PRINTS PR00171 Sugar transporter signature 99 118 4.7E-22 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_015535 7120f78a4e33499814ed278765a29ef0 445 PRINTS PR00171 Sugar transporter signature 15 25 4.7E-22 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_015535 7120f78a4e33499814ed278765a29ef0 445 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 3 430 1.4E-101 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_015535 7120f78a4e33499814ed278765a29ef0 445 SUPERFAMILY SSF103473 11 431 3.4E-63 T 14-10-2018 IPR036259 MFS transporter superfamily D172_015480 8915b060f97182346ad30795941c566d 112 Gene3D G3DSA:3.10.20.30 1 112 8.8E-35 T 14-10-2018 IPR012675 Beta-grasp domain superfamily D172_015480 8915b060f97182346ad30795941c566d 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 D172_015480 8915b060f97182346ad30795941c566d 112 SUPERFAMILY SSF54292 4 103 1.24E-31 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D172_015480 8915b060f97182346ad30795941c566d 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 7.8E-56 T 14-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 D172_015480 8915b060f97182346ad30795941c566d 112 PRINTS PR00355 Adrenodoxin signature 42 52 1.9E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 D172_015480 8915b060f97182346ad30795941c566d 112 PRINTS PR00355 Adrenodoxin signature 60 74 1.9E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 D172_015480 8915b060f97182346ad30795941c566d 112 PRINTS PR00355 Adrenodoxin signature 83 91 1.9E-10 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 D172_015480 8915b060f97182346ad30795941c566d 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 2.1E-14 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 D172_004410 6354be1c99caadc453ea64d5c38f4577 960 SUPERFAMILY SSF63411 270 465 5.0E-28 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D172_004410 6354be1c99caadc453ea64d5c38f4577 960 Gene3D G3DSA:3.30.830.10 268 458 3.2E-34 T 14-10-2018 D172_004410 6354be1c99caadc453ea64d5c38f4577 960 Gene3D G3DSA:3.30.830.10 45 264 1.9E-58 T 14-10-2018 D172_004410 6354be1c99caadc453ea64d5c38f4577 960 Pfam PF00675 Insulinase (Peptidase family M16) 59 204 6.7E-26 T 14-10-2018 IPR011765 Peptidase M16, N-terminal D172_004410 6354be1c99caadc453ea64d5c38f4577 960 SUPERFAMILY SSF63411 47 254 1.25E-46 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D172_004410 6354be1c99caadc453ea64d5c38f4577 960 SUPERFAMILY SSF63411 490 674 9.17E-31 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D172_004410 6354be1c99caadc453ea64d5c38f4577 960 Pfam PF05193 Peptidase M16 inactive domain 645 837 1.1E-8 T 14-10-2018 IPR007863 Peptidase M16, C-terminal D172_004410 6354be1c99caadc453ea64d5c38f4577 960 Pfam PF05193 Peptidase M16 inactive domain 221 393 6.7E-19 T 14-10-2018 IPR007863 Peptidase M16, C-terminal D172_004410 6354be1c99caadc453ea64d5c38f4577 960 Gene3D G3DSA:3.30.830.10 490 691 4.9E-31 T 14-10-2018 D172_004410 6354be1c99caadc453ea64d5c38f4577 960 Gene3D G3DSA:3.30.830.10 702 899 7.6E-35 T 14-10-2018 D172_004410 6354be1c99caadc453ea64d5c38f4577 960 SUPERFAMILY SSF63411 707 913 2.67E-18 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 D172_008590 f28955cbe453a78b3104e70e8840a3cc 97 Pfam PF01527 Transposase 1 75 3.0E-17 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_008590 f28955cbe453a78b3104e70e8840a3cc 97 Gene3D G3DSA:1.10.10.60 8 89 1.1E-12 T 14-10-2018 D172_008590 f28955cbe453a78b3104e70e8840a3cc 97 SUPERFAMILY SSF46689 3 95 6.63E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_014680 f28955cbe453a78b3104e70e8840a3cc 97 Pfam PF01527 Transposase 1 75 3.0E-17 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_014680 f28955cbe453a78b3104e70e8840a3cc 97 Gene3D G3DSA:1.10.10.60 8 89 1.1E-12 T 14-10-2018 D172_014680 f28955cbe453a78b3104e70e8840a3cc 97 SUPERFAMILY SSF46689 3 95 6.63E-24 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_019070 44f8002d2f69a325659296df62c83590 287 PIRSF PIRSF028200 9 287 4.9E-50 T 14-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 D172_007815 5aa37f422c0595b35b738ec390d204ac 208 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 205 2.9E-60 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_007815 5aa37f422c0595b35b738ec390d204ac 208 Pfam PF00677 Lumazine binding domain 3 92 5.2E-18 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_007815 5aa37f422c0595b35b738ec390d204ac 208 Pfam PF00677 Lumazine binding domain 106 190 6.4E-20 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_007815 5aa37f422c0595b35b738ec390d204ac 208 PIRSF PIRSF000498 1 208 1.4E-60 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 D172_007815 5aa37f422c0595b35b738ec390d204ac 208 Gene3D G3DSA:2.40.30.20 1 95 8.9E-26 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_007815 5aa37f422c0595b35b738ec390d204ac 208 SUPERFAMILY SSF63380 99 204 5.19E-29 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D172_007815 5aa37f422c0595b35b738ec390d204ac 208 SUPERFAMILY SSF63380 1 94 3.66E-22 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D172_007815 5aa37f422c0595b35b738ec390d204ac 208 Gene3D G3DSA:2.40.30.20 100 195 3.7E-28 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 D172_006745 dcb66cafd6a4ec2a2bc08a269d2230a2 987 Gene3D G3DSA:2.170.130.10 58 181 3.8E-13 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_006745 dcb66cafd6a4ec2a2bc08a269d2230a2 987 SUPERFAMILY SSF56935 53 986 7.33E-87 T 14-10-2018 D172_006745 dcb66cafd6a4ec2a2bc08a269d2230a2 987 Pfam PF00593 TonB dependent receptor 457 985 1.1E-36 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_006745 dcb66cafd6a4ec2a2bc08a269d2230a2 987 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 58 986 3.8E-148 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_006745 dcb66cafd6a4ec2a2bc08a269d2230a2 987 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 177 1.8E-11 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_017745 046608d9ce1046425c96996086a482ad 257 Gene3D G3DSA:3.40.50.10610 127 257 1.2E-48 T 14-10-2018 D172_017745 046608d9ce1046425c96996086a482ad 257 Gene3D G3DSA:3.40.50.10610 33 123 2.8E-36 T 14-10-2018 D172_017745 046608d9ce1046425c96996086a482ad 257 Pfam PF03783 Curli production assembly/transport component CsgG 44 254 9.2E-85 T 14-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 D172_008040 2d4497851f16abf58d40f9170e17b3f6 139 SUPERFAMILY SSF161084 5 131 3.14E-24 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily D172_008040 2d4497851f16abf58d40f9170e17b3f6 139 Pfam PF01124 MAPEG family 9 133 2.1E-19 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein D172_008040 2d4497851f16abf58d40f9170e17b3f6 139 Gene3D G3DSA:1.20.120.550 2 138 1.6E-20 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily D172_008665 3ce510aeb4b875e2c94e7572de2b04fd 199 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 26 176 2.3E-40 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_008665 3ce510aeb4b875e2c94e7572de2b04fd 199 Pfam PF01625 Peptide methionine sulfoxide reductase 27 177 3.6E-47 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_008665 3ce510aeb4b875e2c94e7572de2b04fd 199 SUPERFAMILY SSF55068 8 188 3.4E-62 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_008665 3ce510aeb4b875e2c94e7572de2b04fd 199 Gene3D G3DSA:3.30.1060.10 5 183 1.5E-52 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_008665 3ce510aeb4b875e2c94e7572de2b04fd 199 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 25 183 29.564 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_007105 f2909e3be450cb91dabb9d1f0238a0ef 374 Pfam PF00285 Citrate synthase, C-terminal domain 10 356 6.1E-110 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 D172_007105 f2909e3be450cb91dabb9d1f0238a0ef 374 Gene3D G3DSA:1.10.580.10 31 354 6.7E-117 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 D172_007105 f2909e3be450cb91dabb9d1f0238a0ef 374 Gene3D G3DSA:1.10.230.10 223 321 6.7E-117 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain D172_007105 f2909e3be450cb91dabb9d1f0238a0ef 374 PIRSF PIRSF001369 4 374 6.1E-115 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type D172_007105 f2909e3be450cb91dabb9d1f0238a0ef 374 SUPERFAMILY SSF48256 9 374 3.53E-124 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 D172_007105 f2909e3be450cb91dabb9d1f0238a0ef 374 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 10 374 1.2E-153 T 14-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 D172_007105 f2909e3be450cb91dabb9d1f0238a0ef 374 PRINTS PR00143 Citrate synthase signature 197 225 5.6E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 D172_007105 f2909e3be450cb91dabb9d1f0238a0ef 374 PRINTS PR00143 Citrate synthase signature 250 270 5.6E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 D172_007105 f2909e3be450cb91dabb9d1f0238a0ef 374 PRINTS PR00143 Citrate synthase signature 327 341 5.6E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 D172_007105 f2909e3be450cb91dabb9d1f0238a0ef 374 PRINTS PR00143 Citrate synthase signature 307 323 5.6E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 D172_007105 f2909e3be450cb91dabb9d1f0238a0ef 374 PRINTS PR00143 Citrate synthase signature 175 190 5.6E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 D172_007105 f2909e3be450cb91dabb9d1f0238a0ef 374 PRINTS PR00143 Citrate synthase signature 125 138 5.6E-36 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 D172_007105 f2909e3be450cb91dabb9d1f0238a0ef 374 ProSitePatterns PS00480 Citrate synthase signature. 257 269 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 D172_002435 9f39f9af0a1e163f028c3cb438b857f5 922 SUPERFAMILY SSF82171 192 646 1.83E-19 T 14-10-2018 D172_002435 9f39f9af0a1e163f028c3cb438b857f5 922 Pfam PF00326 Prolyl oligopeptidase family 727 906 1.9E-25 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 D172_002435 9f39f9af0a1e163f028c3cb438b857f5 922 Gene3D G3DSA:2.120.10.30 416 648 7.0E-9 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_002435 9f39f9af0a1e163f028c3cb438b857f5 922 SUPERFAMILY SSF53474 648 905 2.1E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_002435 9f39f9af0a1e163f028c3cb438b857f5 922 Gene3D G3DSA:3.40.50.1820 649 915 3.4E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_012665 090a9d7088517645090aeac5fb31a3e0 249 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 10 240 8.4E-101 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 D172_012665 090a9d7088517645090aeac5fb31a3e0 249 Pfam PF00696 Amino acid kinase family 11 219 1.1E-27 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D172_012665 090a9d7088517645090aeac5fb31a3e0 249 Gene3D G3DSA:3.40.1160.10 4 247 5.2E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D172_012665 090a9d7088517645090aeac5fb31a3e0 249 SUPERFAMILY SSF53633 7 240 8.64E-70 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D172_012665 090a9d7088517645090aeac5fb31a3e0 249 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 42.856 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 D172_012665 090a9d7088517645090aeac5fb31a3e0 249 PIRSF PIRSF005650 4 248 1.5E-88 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 D172_006580 9ec570b24745fe694224dcb5a03de6a0 423 Gene3D G3DSA:3.40.50.300 3 384 2.4E-16 T 14-10-2018 D172_006580 9ec570b24745fe694224dcb5a03de6a0 423 SUPERFAMILY SSF52540 47 375 1.4E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006580 9ec570b24745fe694224dcb5a03de6a0 423 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 48 363 1.1E-37 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D172_009970 b4b5d6a23b2902f26643caa2b2058829 232 SUPERFAMILY SSF55166 20 179 1.53E-16 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 D172_009970 b4b5d6a23b2902f26643caa2b2058829 232 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 180 4.5E-28 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 D172_009970 b4b5d6a23b2902f26643caa2b2058829 232 Gene3D G3DSA:3.30.1380.10 9 200 1.8E-28 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 D172_004675 659a372b9f835813227ee3f75e259936 646 ProSitePatterns PS00455 Putative AMP-binding domain signature. 259 270 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_004675 659a372b9f835813227ee3f75e259936 646 Pfam PF00501 AMP-binding enzyme 82 520 1.1E-94 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_004675 659a372b9f835813227ee3f75e259936 646 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 19 641 1.0E-304 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 D172_004675 659a372b9f835813227ee3f75e259936 646 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 23 80 1.3E-20 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 D172_004675 659a372b9f835813227ee3f75e259936 646 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 643 52.301 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 D172_004675 659a372b9f835813227ee3f75e259936 646 Gene3D G3DSA:3.30.300.30 516 645 8.2E-31 T 14-10-2018 D172_004675 659a372b9f835813227ee3f75e259936 646 SUPERFAMILY SSF56801 7 641 1.07E-184 T 14-10-2018 D172_004675 659a372b9f835813227ee3f75e259936 646 Gene3D G3DSA:3.40.50.12780 49 513 8.1E-108 T 14-10-2018 D172_004675 659a372b9f835813227ee3f75e259936 646 Pfam PF13193 AMP-binding enzyme C-terminal domain 529 607 1.6E-22 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain D172_011870 731c6e5fc00c3a67d1f6db8a7388ae62 188 SUPERFAMILY SSF52540 18 180 1.72E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_011870 731c6e5fc00c3a67d1f6db8a7388ae62 188 Gene3D G3DSA:3.40.50.300 5 171 2.7E-17 T 14-10-2018 D172_020400 4b1e532210d65f84ec9c6eeacad57df0 406 SUPERFAMILY SSF56645 2 264 2.88E-57 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 D172_020400 4b1e532210d65f84ec9c6eeacad57df0 406 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 251 399 1.0E-27 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 D172_020400 4b1e532210d65f84ec9c6eeacad57df0 406 Gene3D G3DSA:1.20.140.10 252 405 5.0E-32 T 14-10-2018 D172_020400 4b1e532210d65f84ec9c6eeacad57df0 406 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 134 4.8E-13 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 D172_020400 4b1e532210d65f84ec9c6eeacad57df0 406 Gene3D G3DSA:1.10.540.10 1 136 3.1E-48 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 D172_020400 4b1e532210d65f84ec9c6eeacad57df0 406 SUPERFAMILY SSF47203 250 405 2.74E-37 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 D172_020400 4b1e532210d65f84ec9c6eeacad57df0 406 Gene3D G3DSA:2.40.110.10 137 251 3.7E-38 T 14-10-2018 D172_020400 4b1e532210d65f84ec9c6eeacad57df0 406 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 139 238 1.0E-15 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 D172_013605 7de54f53434ca2d491683bad4172de2d 310 SUPERFAMILY SSF64182 2 306 8.72E-9 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily D172_013605 7de54f53434ca2d491683bad4172de2d 310 PIRSF PIRSF028235 1 310 7.6E-160 T 14-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 D172_016105 d197bd3d95433dfc006acdaf3a0c87b1 618 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 1.4E-243 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D172_016105 d197bd3d95433dfc006acdaf3a0c87b1 618 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 44.08 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D172_016105 d197bd3d95433dfc006acdaf3a0c87b1 618 Pfam PF00920 Dehydratase family 34 607 2.6E-211 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D172_016105 d197bd3d95433dfc006acdaf3a0c87b1 618 SUPERFAMILY SSF52016 421 612 5.73E-59 T 14-10-2018 D172_016105 d197bd3d95433dfc006acdaf3a0c87b1 618 SUPERFAMILY SSF143975 3 420 1.44E-129 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D172_016105 d197bd3d95433dfc006acdaf3a0c87b1 618 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D172_016105 d197bd3d95433dfc006acdaf3a0c87b1 618 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 D172_016105 d197bd3d95433dfc006acdaf3a0c87b1 618 Gene3D G3DSA:3.50.30.80 421 573 4.6E-53 T 14-10-2018 D172_014235 a1dbf82b86985fb3b4c28dbcd7415b2b 434 SUPERFAMILY SSF53613 36 417 1.99E-43 T 14-10-2018 IPR029056 Ribokinase-like D172_014235 a1dbf82b86985fb3b4c28dbcd7415b2b 434 Pfam PF00294 pfkB family carbohydrate kinase 134 294 3.8E-11 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB D172_002115 726f2e25345f763ec30aec057f766ddb 305 SUPERFAMILY SSF52768 1 304 1.15E-91 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily D172_002115 726f2e25345f763ec30aec057f766ddb 305 Pfam PF00850 Histone deacetylase domain 20 302 5.3E-71 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D172_002115 726f2e25345f763ec30aec057f766ddb 305 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 1.2E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D172_002115 726f2e25345f763ec30aec057f766ddb 305 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 1.2E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D172_002115 726f2e25345f763ec30aec057f766ddb 305 PRINTS PR01270 Histone deacetylase superfamily signature 232 242 1.2E-16 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D172_002115 726f2e25345f763ec30aec057f766ddb 305 Gene3D G3DSA:3.40.800.20 1 305 4.4E-102 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D172_000355 f1e174e2e37279b458b60584ea7e6f18 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 326 436 4.3E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_000355 f1e174e2e37279b458b60584ea7e6f18 439 SMART SM00387 325 439 2.8E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_000355 f1e174e2e37279b458b60584ea7e6f18 439 SUPERFAMILY SSF55874 270 438 2.51E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_000355 f1e174e2e37279b458b60584ea7e6f18 439 Gene3D G3DSA:3.30.565.10 285 438 1.2E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_000355 f1e174e2e37279b458b60584ea7e6f18 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 1.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000355 f1e174e2e37279b458b60584ea7e6f18 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 1.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000355 f1e174e2e37279b458b60584ea7e6f18 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 1.2E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_009670 b722474098943a01b133ba05969c70f6 336 Pfam PF01965 DJ-1/PfpI family 51 151 1.0E-9 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 D172_009670 b722474098943a01b133ba05969c70f6 336 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 281 323 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D172_009670 b722474098943a01b133ba05969c70f6 336 SMART SM00342 244 327 2.4E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_009670 b722474098943a01b133ba05969c70f6 336 SUPERFAMILY SSF46689 227 279 7.53E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_009670 b722474098943a01b133ba05969c70f6 336 SUPERFAMILY SSF46689 280 328 4.3E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_009670 b722474098943a01b133ba05969c70f6 336 SUPERFAMILY SSF52317 9 207 1.69E-29 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_009670 b722474098943a01b133ba05969c70f6 336 Gene3D G3DSA:1.10.10.60 225 333 1.4E-29 T 14-10-2018 D172_009670 b722474098943a01b133ba05969c70f6 336 Gene3D G3DSA:3.40.50.880 4 216 2.0E-40 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_009670 b722474098943a01b133ba05969c70f6 336 Pfam PF12833 Helix-turn-helix domain 250 328 1.6E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_007745 79cbed441dedd5b2043a54da020f1fef 387 SMART SM00922 149 245 2.2E-25 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal D172_007745 79cbed441dedd5b2043a54da020f1fef 387 SUPERFAMILY SSF51604 114 385 2.23E-73 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily D172_007745 79cbed441dedd5b2043a54da020f1fef 387 SUPERFAMILY SSF54826 1 131 6.51E-32 T 14-10-2018 D172_007745 79cbed441dedd5b2043a54da020f1fef 387 Pfam PF13378 Enolase C-terminal domain-like 157 376 3.9E-62 T 14-10-2018 IPR029065 Enolase C-terminal domain-like D172_007745 79cbed441dedd5b2043a54da020f1fef 387 Gene3D G3DSA:3.20.20.120 119 376 4.6E-124 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily D172_007745 79cbed441dedd5b2043a54da020f1fef 387 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 29 126 1.5E-16 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain D172_007745 79cbed441dedd5b2043a54da020f1fef 387 Gene3D G3DSA:3.30.390.10 3 380 4.6E-124 T 14-10-2018 IPR029017 Enolase-like, N-terminal D172_008210 1e16cb812838f119107696fcc0e94950 864 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 445 543 1.1E-21 T 14-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold D172_008210 1e16cb812838f119107696fcc0e94950 864 Gene3D G3DSA:1.10.1740.60 196 280 5.5E-38 T 14-10-2018 D172_008210 1e16cb812838f119107696fcc0e94950 864 SUPERFAMILY SSF63737 6 194 1.57E-47 T 14-10-2018 D172_008210 1e16cb812838f119107696fcc0e94950 864 Gene3D G3DSA:1.10.390.10 281 444 1.6E-67 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily D172_008210 1e16cb812838f119107696fcc0e94950 864 Gene3D G3DSA:2.60.40.1730 17 195 2.0E-65 T 14-10-2018 D172_008210 1e16cb812838f119107696fcc0e94950 864 Pfam PF01433 Peptidase family M1 domain 209 440 1.2E-58 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_008210 1e16cb812838f119107696fcc0e94950 864 Gene3D G3DSA:1.25.50.10 545 864 3.5E-98 T 14-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily D172_008210 1e16cb812838f119107696fcc0e94950 864 SUPERFAMILY SSF55486 205 449 2.2E-70 T 14-10-2018 D172_008210 1e16cb812838f119107696fcc0e94950 864 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 548 864 3.6E-102 T 14-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal D172_008210 1e16cb812838f119107696fcc0e94950 864 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 14 863 0.0 T 14-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 D172_008210 1e16cb812838f119107696fcc0e94950 864 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 128 143 4.1E-10 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_008210 1e16cb812838f119107696fcc0e94950 864 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 259 269 4.1E-10 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_008210 1e16cb812838f119107696fcc0e94950 864 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 177 192 4.1E-10 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_008210 1e16cb812838f119107696fcc0e94950 864 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 295 310 4.1E-10 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_008210 1e16cb812838f119107696fcc0e94950 864 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 314 326 4.1E-10 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_008210 1e16cb812838f119107696fcc0e94950 864 Gene3D G3DSA:2.60.40.1840 445 543 2.4E-21 T 14-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily D172_010040 ca4430d83f8515cbb20cc24474a44b71 358 Gene3D G3DSA:3.40.50.300 87 334 5.8E-83 T 14-10-2018 D172_010040 ca4430d83f8515cbb20cc24474a44b71 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 96 336 8.5E-98 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 D172_010040 ca4430d83f8515cbb20cc24474a44b71 358 ProSitePatterns PS01215 Mrp family signature. 203 219 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 D172_010040 ca4430d83f8515cbb20cc24474a44b71 358 SUPERFAMILY SSF52540 91 319 1.51E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_010040 ca4430d83f8515cbb20cc24474a44b71 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 91 343 36.2 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein D172_000155 04f882d14c2586d09c4b77490f759ec9 300 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 298 4.3E-167 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_000155 04f882d14c2586d09c4b77490f759ec9 300 SUPERFAMILY SSF55681 8 290 1.1E-133 T 14-10-2018 D172_000155 04f882d14c2586d09c4b77490f759ec9 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 1.5E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_000155 04f882d14c2586d09c4b77490f759ec9 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 251 267 1.5E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_000155 04f882d14c2586d09c4b77490f759ec9 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 1.5E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_000155 04f882d14c2586d09c4b77490f759ec9 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 1.5E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_000155 04f882d14c2586d09c4b77490f759ec9 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 1.5E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_000155 04f882d14c2586d09c4b77490f759ec9 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 1.5E-69 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_000155 04f882d14c2586d09c4b77490f759ec9 300 Gene3D G3DSA:3.30.930.10 1 214 1.6E-110 T 14-10-2018 D172_000155 04f882d14c2586d09c4b77490f759ec9 300 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 291 60.567 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_000155 04f882d14c2586d09c4b77490f759ec9 300 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 290 5.9E-151 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 D172_000155 04f882d14c2586d09c4b77490f759ec9 300 Gene3D G3DSA:1.20.58.180 215 296 5.7E-35 T 14-10-2018 D172_003055 1d42b5c1a61942643827a80deb15fc2d 547 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 144 276 1.0E-13 T 14-10-2018 IPR000477 Reverse transcriptase domain D172_001505 38a092520fe62e591f717def5b6e5039 265 Pfam PF00561 alpha/beta hydrolase fold 19 124 5.9E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_001505 38a092520fe62e591f717def5b6e5039 265 Gene3D G3DSA:3.40.50.1820 5 263 2.5E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_001505 38a092520fe62e591f717def5b6e5039 265 PRINTS PR00412 Epoxide hydrolase signature 43 58 8.6E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D172_001505 38a092520fe62e591f717def5b6e5039 265 PRINTS PR00412 Epoxide hydrolase signature 237 259 8.6E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D172_001505 38a092520fe62e591f717def5b6e5039 265 PRINTS PR00412 Epoxide hydrolase signature 205 221 8.6E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D172_001505 38a092520fe62e591f717def5b6e5039 265 SUPERFAMILY SSF53474 10 261 3.21E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_019360 f4e43a7ec2194cfce9e2f661859016d5 186 Pfam PF11659 Protein of unknown function (DUF3261) 53 185 1.4E-18 T 14-10-2018 IPR021675 Protein of unknown function DUF3261 D172_000370 41f0a6c0cb3de712f2d5d43d2ab4db0b 233 Pfam PF00005 ABC transporter 21 169 5.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_000370 41f0a6c0cb3de712f2d5d43d2ab4db0b 233 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_000370 41f0a6c0cb3de712f2d5d43d2ab4db0b 233 SUPERFAMILY SSF52540 1 221 2.4E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_000370 41f0a6c0cb3de712f2d5d43d2ab4db0b 233 SMART SM00382 30 224 5.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_000370 41f0a6c0cb3de712f2d5d43d2ab4db0b 233 Gene3D G3DSA:3.40.50.300 1 231 5.2E-70 T 14-10-2018 D172_001695 96193fa0f8bbd00b78a789fcc78e2966 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D172_001695 96193fa0f8bbd00b78a789fcc78e2966 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 7 145 6.9E-62 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D172_001695 96193fa0f8bbd00b78a789fcc78e2966 150 Pfam PF01220 Dehydroquinase class II 7 142 1.1E-60 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D172_001695 96193fa0f8bbd00b78a789fcc78e2966 150 SUPERFAMILY SSF52304 6 148 1.01E-61 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D172_001695 96193fa0f8bbd00b78a789fcc78e2966 150 PIRSF PIRSF001399 3 149 1.1E-60 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D172_001695 96193fa0f8bbd00b78a789fcc78e2966 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 8 149 1.0E-73 T 14-10-2018 D172_001695 96193fa0f8bbd00b78a789fcc78e2966 150 Gene3D G3DSA:3.40.50.9100 1 149 1.1E-65 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D172_001695 96193fa0f8bbd00b78a789fcc78e2966 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 70.065 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 D172_004755 e6e515fa20a5a81d59f538f796f9e229 162 SUPERFAMILY SSF46785 13 155 4.18E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_004755 e6e515fa20a5a81d59f538f796f9e229 162 SMART SM00347 38 138 2.1E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_004755 e6e515fa20a5a81d59f538f796f9e229 162 Gene3D G3DSA:1.10.10.10 4 154 3.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_004755 e6e515fa20a5a81d59f538f796f9e229 162 ProSitePatterns PS01117 MarR-type HTH domain signature. 77 111 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site D172_004755 e6e515fa20a5a81d59f538f796f9e229 162 Pfam PF01047 MarR family 45 102 8.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_002835 3b23d56ef6631591882ab210592b9252 352 SUPERFAMILY SSF53187 26 320 3.11E-74 T 14-10-2018 D172_002835 3b23d56ef6631591882ab210592b9252 352 Gene3D G3DSA:3.40.630.10 18 321 1.2E-93 T 14-10-2018 D172_002835 3b23d56ef6631591882ab210592b9252 352 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 318 7.9E-65 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 D172_002835 3b23d56ef6631591882ab210592b9252 352 PIRSF PIRSF039012 5 325 9.0E-93 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 D172_002665 bc2d2ede36549bb176dc684ebbb0d704 238 Gene3D G3DSA:3.30.110.170 43 209 2.5E-9 T 14-10-2018 D172_002665 bc2d2ede36549bb176dc684ebbb0d704 238 PIRSF PIRSF029033 2 238 3.4E-90 T 14-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein D172_002665 bc2d2ede36549bb176dc684ebbb0d704 238 Pfam PF04402 Protein of unknown function (DUF541) 41 232 1.2E-16 T 14-10-2018 IPR007497 Protein of unknown function DUF541 D172_002665 bc2d2ede36549bb176dc684ebbb0d704 238 Gene3D G3DSA:3.30.70.2970 53 168 2.5E-9 T 14-10-2018 D172_007735 d1b43f024b9a661db258e12faaae9406 327 Gene3D G3DSA:2.70.98.10 15 327 7.3E-29 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 D172_007735 d1b43f024b9a661db258e12faaae9406 327 SUPERFAMILY SSF74650 5 294 4.44E-14 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 D172_016055 a05a60ca126a4535eea4252ead078752 215 SUPERFAMILY SSF52317 1 211 1.79E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_016055 a05a60ca126a4535eea4252ead078752 215 PIRSF PIRSF006320 1 215 7.8E-99 T 14-10-2018 IPR026041 Glyoxalase ElbB D172_016055 a05a60ca126a4535eea4252ead078752 215 Gene3D G3DSA:3.40.50.880 1 215 2.0E-82 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_010405 bb91e623232f7182932c7fdda2327973 314 SUPERFAMILY SSF46785 7 92 8.71E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_010405 bb91e623232f7182932c7fdda2327973 314 Gene3D G3DSA:1.10.10.10 4 86 1.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_010405 bb91e623232f7182932c7fdda2327973 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 5.5E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_010405 bb91e623232f7182932c7fdda2327973 314 SUPERFAMILY SSF53850 93 298 2.78E-37 T 14-10-2018 D172_010405 bb91e623232f7182932c7fdda2327973 314 Pfam PF03466 LysR substrate binding domain 92 295 4.5E-41 T 14-10-2018 IPR005119 LysR, substrate-binding D172_010405 bb91e623232f7182932c7fdda2327973 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_010405 bb91e623232f7182932c7fdda2327973 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_010405 bb91e623232f7182932c7fdda2327973 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_010405 bb91e623232f7182932c7fdda2327973 314 Gene3D G3DSA:3.40.190.290 95 302 1.7E-37 T 14-10-2018 D172_021030 25ec0020f2e4fade153ac03e08a3ab4d 282 Gene3D G3DSA:1.10.260.40 4 112 5.2E-20 T 14-10-2018 D172_021030 25ec0020f2e4fade153ac03e08a3ab4d 282 Pfam PF13464 Domain of unknown function (DUF4115) 205 278 7.5E-19 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 D172_021030 25ec0020f2e4fade153ac03e08a3ab4d 282 Pfam PF13413 Helix-turn-helix domain 19 78 2.5E-16 T 14-10-2018 D172_018020 08dd65c63b7be6b8ae8c666fcc0bd9fb 295 SUPERFAMILY SSF46785 8 111 1.46E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_018020 08dd65c63b7be6b8ae8c666fcc0bd9fb 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 1.2E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_018020 08dd65c63b7be6b8ae8c666fcc0bd9fb 295 Gene3D G3DSA:3.40.190.290 90 291 2.4E-60 T 14-10-2018 D172_018020 08dd65c63b7be6b8ae8c666fcc0bd9fb 295 Gene3D G3DSA:1.10.10.10 4 88 6.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_018020 08dd65c63b7be6b8ae8c666fcc0bd9fb 295 SUPERFAMILY SSF53850 88 293 1.71E-46 T 14-10-2018 D172_018020 08dd65c63b7be6b8ae8c666fcc0bd9fb 295 Pfam PF03466 LysR substrate binding domain 88 288 4.4E-43 T 14-10-2018 IPR005119 LysR, substrate-binding D172_019775 0823b157a0ee1d403a4d1b7e0258e368 353 Pfam PF08645 Polynucleotide kinase 3 phosphatase 9 131 3.1E-7 T 14-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 D172_019775 0823b157a0ee1d403a4d1b7e0258e368 353 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 4 158 1.7E-66 T 14-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 D172_019775 0823b157a0ee1d403a4d1b7e0258e368 353 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 223 236 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 D172_019775 0823b157a0ee1d403a4d1b7e0258e368 353 Gene3D G3DSA:3.40.50.1000 1 158 2.8E-44 T 14-10-2018 IPR023214 HAD superfamily D172_019775 0823b157a0ee1d403a4d1b7e0258e368 353 SUPERFAMILY SSF56784 1 149 1.34E-36 T 14-10-2018 IPR036412 HAD-like superfamily D172_019775 0823b157a0ee1d403a4d1b7e0258e368 353 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 164 353 33.603 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 D172_019775 0823b157a0ee1d403a4d1b7e0258e368 353 SUPERFAMILY SSF54211 164 247 9.11E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_019775 0823b157a0ee1d403a4d1b7e0258e368 353 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 147 5.2E-27 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 D172_019775 0823b157a0ee1d403a4d1b7e0258e368 353 Gene3D G3DSA:3.30.230.40 159 251 2.7E-33 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 D172_019775 0823b157a0ee1d403a4d1b7e0258e368 353 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 353 46.674 T 14-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 D172_019775 0823b157a0ee1d403a4d1b7e0258e368 353 Gene3D G3DSA:3.30.230.40 252 353 1.2E-30 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 D172_019775 0823b157a0ee1d403a4d1b7e0258e368 353 SUPERFAMILY SSF54211 250 338 2.4E-25 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_019775 0823b157a0ee1d403a4d1b7e0258e368 353 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 145 1.6E-44 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 D172_019775 0823b157a0ee1d403a4d1b7e0258e368 353 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 193 334 1.2E-57 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 D172_010260 61b57a4aeaa2ec20a5cc876b56aadb45 222 Pfam PF11205 Protein of unknown function (DUF2987) 26 174 6.7E-48 T 14-10-2018 IPR021370 Protein of unknown function DUF2987 D172_019965 2ef1adf7098a052344fbdc90a25e7a05 446 SMART SM00028 176 209 11.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_019965 2ef1adf7098a052344fbdc90a25e7a05 446 SMART SM00028 388 421 1.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_019965 2ef1adf7098a052344fbdc90a25e7a05 446 SMART SM00028 352 385 150.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_019965 2ef1adf7098a052344fbdc90a25e7a05 446 SMART SM00028 102 135 37.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_019965 2ef1adf7098a052344fbdc90a25e7a05 446 Pfam PF13181 Tetratricopeptide repeat 178 206 0.029 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_019965 2ef1adf7098a052344fbdc90a25e7a05 446 SUPERFAMILY SSF81901 179 419 2.07E-14 T 14-10-2018 D172_019965 2ef1adf7098a052344fbdc90a25e7a05 446 Gene3D G3DSA:1.25.40.10 355 440 8.2E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_019965 2ef1adf7098a052344fbdc90a25e7a05 446 SUPERFAMILY SSF48452 100 206 1.61E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_019965 2ef1adf7098a052344fbdc90a25e7a05 446 Gene3D G3DSA:1.25.40.10 42 354 7.4E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_010525 9aefa859900ceb4d7c020e94582c759d 376 Pfam PF04865 Baseplate J-like protein 75 318 3.9E-22 T 14-10-2018 IPR006949 Baseplate protein J-like D172_010905 6b9a66195aad9048d9958f7ac8e63279 203 Hamap MF_01151 Protein GrpE [grpE]. 2 199 21.86 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D172_010905 6b9a66195aad9048d9958f7ac8e63279 203 Pfam PF01025 GrpE 36 199 3.3E-54 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D172_010905 6b9a66195aad9048d9958f7ac8e63279 203 Gene3D G3DSA:2.30.22.10 143 199 3.0E-26 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 D172_010905 6b9a66195aad9048d9958f7ac8e63279 203 PRINTS PR00773 GrpE protein signature 96 111 1.8E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D172_010905 6b9a66195aad9048d9958f7ac8e63279 203 PRINTS PR00773 GrpE protein signature 178 197 1.8E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D172_010905 6b9a66195aad9048d9958f7ac8e63279 203 PRINTS PR00773 GrpE protein signature 68 84 1.8E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D172_010905 6b9a66195aad9048d9958f7ac8e63279 203 PRINTS PR00773 GrpE protein signature 151 166 1.8E-27 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D172_010905 6b9a66195aad9048d9958f7ac8e63279 203 SUPERFAMILY SSF58014 46 143 9.15E-29 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 D172_010905 6b9a66195aad9048d9958f7ac8e63279 203 ProSitePatterns PS01071 grpE protein signature. 154 197 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 D172_010905 6b9a66195aad9048d9958f7ac8e63279 203 SUPERFAMILY SSF51064 144 200 4.32E-20 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 D172_010905 6b9a66195aad9048d9958f7ac8e63279 203 Gene3D G3DSA:3.90.20.20 36 142 2.8E-31 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 D172_013340 b6ac3e1b62a0926e0e3e3b86077f198a 127 SMART SM00448 5 119 8.0E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_013340 b6ac3e1b62a0926e0e3e3b86077f198a 127 SUPERFAMILY SSF52172 3 125 1.57E-38 T 14-10-2018 IPR011006 CheY-like superfamily D172_013340 b6ac3e1b62a0926e0e3e3b86077f198a 127 Pfam PF00072 Response regulator receiver domain 7 119 9.1E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_013340 b6ac3e1b62a0926e0e3e3b86077f198a 127 Gene3D G3DSA:3.40.50.2300 1 126 1.1E-40 T 14-10-2018 D172_020850 c0e8600267dbc241d89b87e207b9aec1 247 SUPERFAMILY SSF55486 24 217 2.05E-16 T 14-10-2018 D172_020850 c0e8600267dbc241d89b87e207b9aec1 247 Gene3D G3DSA:3.40.390.10 3 204 2.5E-13 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 D172_020850 c0e8600267dbc241d89b87e207b9aec1 247 Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like 37 222 1.1E-16 T 14-10-2018 D172_015060 fff26bd5b6087880801d3cfba2b1b1c0 207 SUPERFAMILY SSF142695 19 171 4.18E-51 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D172_015060 fff26bd5b6087880801d3cfba2b1b1c0 207 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 2 201 34.793 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D172_015060 fff26bd5b6087880801d3cfba2b1b1c0 207 Pfam PF00925 GTP cyclohydrolase II 20 171 3.6E-54 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D172_015060 fff26bd5b6087880801d3cfba2b1b1c0 207 Gene3D G3DSA:3.40.50.10990 5 174 3.1E-60 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 D172_013215 a4dcfa10d742c4bfc2283279e3dc20d3 98 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 37 98 2.0E-22 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain D172_013215 a4dcfa10d742c4bfc2283279e3dc20d3 98 SMART SM00278 46 65 0.015 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D172_013215 a4dcfa10d742c4bfc2283279e3dc20d3 98 SMART SM00278 76 95 3.1 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 D172_013215 a4dcfa10d742c4bfc2283279e3dc20d3 98 Gene3D G3DSA:1.10.150.280 25 98 7.3E-23 T 14-10-2018 D172_013215 a4dcfa10d742c4bfc2283279e3dc20d3 98 Pfam PF12836 Helix-hairpin-helix motif 37 97 2.0E-22 T 14-10-2018 D172_013215 a4dcfa10d742c4bfc2283279e3dc20d3 98 SUPERFAMILY SSF47781 36 98 7.11E-26 T 14-10-2018 IPR010994 RuvA domain 2-like D172_017415 6004d45b09e67d54c1450c9b56398378 108 Gene3D G3DSA:1.10.10.60 10 91 1.6E-6 T 14-10-2018 D172_017415 6004d45b09e67d54c1450c9b56398378 108 SUPERFAMILY SSF46689 5 93 1.16E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_017415 6004d45b09e67d54c1450c9b56398378 108 Pfam PF01527 Transposase 5 77 2.0E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_000600 46185943dd199c8d2ac42d31c8c0595e 724 Pfam PF00326 Prolyl oligopeptidase family 505 721 2.7E-66 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 D172_000600 46185943dd199c8d2ac42d31c8c0595e 724 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 650 672 6.1E-49 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_000600 46185943dd199c8d2ac42d31c8c0595e 724 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 574 594 6.1E-49 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_000600 46185943dd199c8d2ac42d31c8c0595e 724 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 544 563 6.1E-49 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_000600 46185943dd199c8d2ac42d31c8c0595e 724 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 490 508 6.1E-49 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_000600 46185943dd199c8d2ac42d31c8c0595e 724 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 632 647 6.1E-49 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_000600 46185943dd199c8d2ac42d31c8c0595e 724 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 516 540 6.1E-49 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_000600 46185943dd199c8d2ac42d31c8c0595e 724 Gene3D G3DSA:2.130.10.120 113 447 7.2E-251 T 14-10-2018 D172_000600 46185943dd199c8d2ac42d31c8c0595e 724 SUPERFAMILY SSF50993 41 452 4.45E-94 T 14-10-2018 D172_000600 46185943dd199c8d2ac42d31c8c0595e 724 Gene3D G3DSA:3.40.50.1820 62 716 7.2E-251 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_000600 46185943dd199c8d2ac42d31c8c0595e 724 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 45 446 3.4E-99 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 D172_000600 46185943dd199c8d2ac42d31c8c0595e 724 SUPERFAMILY SSF53474 456 700 7.52E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_015110 798e9eae22410a121141f13b6cbfc6c3 218 Gene3D G3DSA:3.30.1150.10 128 217 5.8E-10 T 14-10-2018 D172_015110 798e9eae22410a121141f13b6cbfc6c3 218 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 157 217 2.9E-6 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 D172_015110 798e9eae22410a121141f13b6cbfc6c3 218 SUPERFAMILY SSF74653 157 216 1.7E-6 T 14-10-2018 D172_018810 1521a0d1cb4a9189203301952bc2aff6 256 SUPERFAMILY SSF81901 49 252 3.66E-11 T 14-10-2018 D172_018810 1521a0d1cb4a9189203301952bc2aff6 256 Gene3D G3DSA:1.25.40.10 27 256 1.5E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_005440 7e9fb2e71d3f26ec787dabde83da560f 127 Pfam PF00072 Response regulator receiver domain 7 117 1.4E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005440 7e9fb2e71d3f26ec787dabde83da560f 127 Gene3D G3DSA:3.40.50.2300 2 126 7.6E-30 T 14-10-2018 D172_005440 7e9fb2e71d3f26ec787dabde83da560f 127 SMART SM00448 5 117 1.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005440 7e9fb2e71d3f26ec787dabde83da560f 127 SUPERFAMILY SSF52172 4 121 1.2E-29 T 14-10-2018 IPR011006 CheY-like superfamily D172_007380 abce29bcf05a9a0d33dd6bcb92aa2fd7 466 SUPERFAMILY SSF52540 140 383 4.5E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_007380 abce29bcf05a9a0d33dd6bcb92aa2fd7 466 SMART SM00382 161 304 3.4E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_007380 abce29bcf05a9a0d33dd6bcb92aa2fd7 466 SUPERFAMILY SSF52172 3 185 9.39E-39 T 14-10-2018 IPR011006 CheY-like superfamily D172_007380 abce29bcf05a9a0d33dd6bcb92aa2fd7 466 Gene3D G3DSA:1.10.8.60 313 392 5.6E-20 T 14-10-2018 D172_007380 abce29bcf05a9a0d33dd6bcb92aa2fd7 466 Gene3D G3DSA:3.40.50.2300 1 130 9.4E-28 T 14-10-2018 D172_007380 abce29bcf05a9a0d33dd6bcb92aa2fd7 466 SUPERFAMILY SSF46689 410 462 7.47E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_007380 abce29bcf05a9a0d33dd6bcb92aa2fd7 466 Gene3D G3DSA:3.40.50.300 131 312 1.9E-60 T 14-10-2018 D172_007380 abce29bcf05a9a0d33dd6bcb92aa2fd7 466 Pfam PF02954 Bacterial regulatory protein, Fis family 422 460 3.6E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 D172_007380 abce29bcf05a9a0d33dd6bcb92aa2fd7 466 Pfam PF00072 Response regulator receiver domain 5 111 1.1E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_007380 abce29bcf05a9a0d33dd6bcb92aa2fd7 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site D172_007380 abce29bcf05a9a0d33dd6bcb92aa2fd7 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 D172_007380 abce29bcf05a9a0d33dd6bcb92aa2fd7 466 Pfam PF00158 Sigma-54 interaction domain 141 308 6.5E-66 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 D172_007380 abce29bcf05a9a0d33dd6bcb92aa2fd7 466 Gene3D G3DSA:1.10.10.60 420 463 8.5E-10 T 14-10-2018 D172_007380 abce29bcf05a9a0d33dd6bcb92aa2fd7 466 SMART SM00448 3 113 5.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_011420 a36a6ca191746ac46107401fdd855f77 247 Gene3D G3DSA:2.20.130.10 147 206 4.6E-36 T 14-10-2018 D172_011420 a36a6ca191746ac46107401fdd855f77 247 Pfam PF13649 Methyltransferase domain 45 135 2.8E-10 T 14-10-2018 D172_011420 a36a6ca191746ac46107401fdd855f77 247 SUPERFAMILY SSF53335 6 246 7.86E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_011420 a36a6ca191746ac46107401fdd855f77 247 Gene3D G3DSA:3.40.50.150 12 215 4.6E-36 T 14-10-2018 D172_000120 e745ef5e349da0aec3b56cd10cbf58aa 628 Pfam PF14718 Soluble lytic murein transglycosylase L domain 395 460 7.0E-21 T 14-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 D172_000120 e745ef5e349da0aec3b56cd10cbf58aa 628 Pfam PF01464 Transglycosylase SLT domain 473 574 2.6E-24 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 D172_000120 e745ef5e349da0aec3b56cd10cbf58aa 628 SUPERFAMILY SSF48435 25 466 2.22E-108 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 D172_000120 e745ef5e349da0aec3b56cd10cbf58aa 628 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 490 518 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 D172_000120 e745ef5e349da0aec3b56cd10cbf58aa 628 Gene3D G3DSA:1.10.1240.20 393 461 4.5E-6 T 14-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 D172_000120 e745ef5e349da0aec3b56cd10cbf58aa 628 Gene3D G3DSA:1.25.20.10 25 376 1.7E-83 T 14-10-2018 D172_000120 e745ef5e349da0aec3b56cd10cbf58aa 628 SUPERFAMILY SSF53955 441 608 6.48E-43 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily D172_000120 e745ef5e349da0aec3b56cd10cbf58aa 628 Gene3D G3DSA:1.10.530.10 462 620 3.2E-45 T 14-10-2018 D172_015515 1e2ced0ab7b410fe8ae757903fb5f133 241 PIRSF PIRSF004808 1 241 1.2E-73 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 D172_015515 1e2ced0ab7b410fe8ae757903fb5f133 241 SUPERFAMILY SSF75217 5 166 2.94E-39 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases D172_015515 1e2ced0ab7b410fe8ae757903fb5f133 241 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 3 238 8.6E-84 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 D172_015515 1e2ced0ab7b410fe8ae757903fb5f133 241 Gene3D G3DSA:3.40.1280.10 1 165 2.6E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D172_015515 1e2ced0ab7b410fe8ae757903fb5f133 241 Gene3D G3DSA:1.10.8.590 166 241 5.9E-26 T 14-10-2018 D172_015515 1e2ced0ab7b410fe8ae757903fb5f133 241 Pfam PF00588 SpoU rRNA Methylase family 6 155 1.8E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 D172_003595 c4fbd67519af24b6e0919758d75a426d 80 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 79 5.0E-15 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 D172_003595 c4fbd67519af24b6e0919758d75a426d 80 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 9 75 2.0E-15 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 D172_003595 c4fbd67519af24b6e0919758d75a426d 80 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 80 22.57 T 14-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 D172_006185 79e758829ba673fae707a325c0cedebb 672 Pfam PF07715 TonB-dependent Receptor Plug Domain 35 131 2.7E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_006185 79e758829ba673fae707a325c0cedebb 672 Gene3D G3DSA:2.170.130.10 31 137 2.1E-39 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_006185 79e758829ba673fae707a325c0cedebb 672 SUPERFAMILY SSF56935 18 672 7.79E-90 T 14-10-2018 D172_006185 79e758829ba673fae707a325c0cedebb 672 Gene3D G3DSA:2.40.170.20 139 672 6.5E-92 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_006185 79e758829ba673fae707a325c0cedebb 672 Pfam PF00593 TonB dependent receptor 169 671 2.1E-31 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_015565 f2e7d14d492c898eb59633a69391fbae 226 PIRSF PIRSF028451 1 224 2.2E-81 T 14-10-2018 IPR015996 Uncharacterised conserved protein UCP028451 D172_015565 f2e7d14d492c898eb59633a69391fbae 226 Pfam PF09365 Conserved hypothetical protein (DUF2461) 5 203 9.6E-61 T 14-10-2018 IPR012808 Conserved hypothetical protein CHP02453 D172_015565 f2e7d14d492c898eb59633a69391fbae 226 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 2 203 4.2E-77 T 14-10-2018 IPR012808 Conserved hypothetical protein CHP02453 D172_006315 0bd61576bc1de2367a5b7b38e9509d4a 393 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 9 387 1.5E-156 T 14-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 D172_006315 0bd61576bc1de2367a5b7b38e9509d4a 393 PIRSF PIRSF001434 1 390 4.4E-120 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D172_006315 0bd61576bc1de2367a5b7b38e9509d4a 393 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 387 8.1E-110 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D172_006315 0bd61576bc1de2367a5b7b38e9509d4a 393 SUPERFAMILY SSF53383 25 387 1.77E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_006315 0bd61576bc1de2367a5b7b38e9509d4a 393 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 201 215 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D172_006315 0bd61576bc1de2367a5b7b38e9509d4a 393 Gene3D G3DSA:3.40.640.10 3 257 1.3E-73 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_006315 0bd61576bc1de2367a5b7b38e9509d4a 393 Gene3D G3DSA:3.90.1150.10 258 389 4.0E-36 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_002655 21dd5cfd3350e92395591e475f2f60b6 317 SUPERFAMILY SSF81324 21 250 6.93E-50 T 14-10-2018 D172_002655 21dd5cfd3350e92395591e475f2f60b6 317 PRINTS PR00169 Potassium channel signature 19 47 2.2E-32 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 D172_002655 21dd5cfd3350e92395591e475f2f60b6 317 PRINTS PR00169 Potassium channel signature 132 158 2.2E-32 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 D172_002655 21dd5cfd3350e92395591e475f2f60b6 317 PRINTS PR00169 Potassium channel signature 61 84 2.2E-32 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 D172_002655 21dd5cfd3350e92395591e475f2f60b6 317 PRINTS PR00169 Potassium channel signature 221 247 2.2E-32 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 D172_002655 21dd5cfd3350e92395591e475f2f60b6 317 PRINTS PR00169 Potassium channel signature 161 184 2.2E-32 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 D172_002655 21dd5cfd3350e92395591e475f2f60b6 317 PRINTS PR00169 Potassium channel signature 192 214 2.2E-32 T 14-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 D172_002655 21dd5cfd3350e92395591e475f2f60b6 317 Gene3D G3DSA:1.10.287.70 25 251 1.2E-60 T 14-10-2018 D172_002655 21dd5cfd3350e92395591e475f2f60b6 317 Pfam PF00520 Ion transport protein 27 253 6.4E-30 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 D172_016930 553d2b9021a91643feb5fab1d57dae97 533 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 444 5.4E-175 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 D172_016930 553d2b9021a91643feb5fab1d57dae97 533 SUPERFAMILY SSF56112 91 438 4.52E-41 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily D172_016930 553d2b9021a91643feb5fab1d57dae97 533 Pfam PF03109 ABC1 family 114 232 2.1E-32 T 14-10-2018 IPR004147 UbiB domain D172_016930 553d2b9021a91643feb5fab1d57dae97 533 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 530 52.122 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 D172_016310 a084e843813ab4f02246fac7c03db6cc 292 SMART SM00382 26 233 1.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_016310 a084e843813ab4f02246fac7c03db6cc 292 Pfam PF00005 ABC transporter 18 162 5.0E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_016310 a084e843813ab4f02246fac7c03db6cc 292 Gene3D G3DSA:3.40.50.300 1 237 1.8E-57 T 14-10-2018 D172_016310 a084e843813ab4f02246fac7c03db6cc 292 SUPERFAMILY SSF52540 2 222 4.83E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_016310 a084e843813ab4f02246fac7c03db6cc 292 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_014070 448eea24bb9a649395dd8e447764f51f 292 Pfam PF01040 UbiA prenyltransferase family 29 271 1.9E-61 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 D172_014070 448eea24bb9a649395dd8e447764f51f 292 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 6 289 29.475 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 D172_014070 448eea24bb9a649395dd8e447764f51f 292 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 13 287 2.0E-103 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 D172_014070 448eea24bb9a649395dd8e447764f51f 292 Gene3D G3DSA:1.10.357.140 24 169 2.6E-39 T 14-10-2018 D172_014070 448eea24bb9a649395dd8e447764f51f 292 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 68 90 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site D172_014070 448eea24bb9a649395dd8e447764f51f 292 Gene3D G3DSA:1.20.120.1780 170 291 9.8E-13 T 14-10-2018 D172_016045 f2ca04070ff65f87a77f8db4f6ae2a95 195 SMART SM00867 24 193 2.2E-14 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like D172_016045 f2ca04070ff65f87a77f8db4f6ae2a95 195 Gene3D G3DSA:2.40.128.110 20 195 1.7E-47 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily D172_016045 f2ca04070ff65f87a77f8db4f6ae2a95 195 PIRSF PIRSF029811 1 195 7.1E-71 T 14-10-2018 IPR027016 Uncharacterised protein with YceI domain D172_016045 f2ca04070ff65f87a77f8db4f6ae2a95 195 Pfam PF04264 YceI-like domain 25 191 3.9E-12 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like D172_016045 f2ca04070ff65f87a77f8db4f6ae2a95 195 SUPERFAMILY SSF101874 22 195 2.09E-20 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily D172_005120 2e0f6b622b7686560890e567f5dbe637 446 Pfam PF07394 Protein of unknown function (DUF1501) 42 426 6.5E-51 T 14-10-2018 IPR010869 Protein of unknown function DUF1501 D172_003085 369b3fabe51ff9a8a0bcb12a3eea2264 163 Pfam PF11454 Protein of unknown function (DUF3016) 23 155 2.7E-41 T 14-10-2018 IPR021557 Protein of unknown function DUF3016 D172_008520 c391c84f0205df1bbcfb0220fd51d4d0 209 SUPERFAMILY SSF51161 23 206 3.05E-46 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily D172_008520 c391c84f0205df1bbcfb0220fd51d4d0 209 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 149 1.9E-9 T 14-10-2018 IPR001451 Hexapeptide repeat D172_008520 c391c84f0205df1bbcfb0220fd51d4d0 209 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 124 152 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D172_008520 c391c84f0205df1bbcfb0220fd51d4d0 209 Gene3D G3DSA:2.160.10.10 1 209 7.0E-76 T 14-10-2018 D172_009965 0b1d43e0a5707c28423293148bca6c87 376 Gene3D G3DSA:3.30.70.360 180 293 3.5E-129 T 14-10-2018 D172_009965 0b1d43e0a5707c28423293148bca6c87 376 Gene3D G3DSA:3.40.630.10 8 363 3.5E-129 T 14-10-2018 D172_009965 0b1d43e0a5707c28423293148bca6c87 376 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 374 4.7E-168 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 D172_009965 0b1d43e0a5707c28423293148bca6c87 376 SUPERFAMILY SSF55031 180 289 1.08E-31 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain D172_009965 0b1d43e0a5707c28423293148bca6c87 376 Pfam PF07687 Peptidase dimerisation domain 176 283 2.0E-26 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain D172_009965 0b1d43e0a5707c28423293148bca6c87 376 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 98 136 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 D172_009965 0b1d43e0a5707c28423293148bca6c87 376 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 376 52.344 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 D172_009965 0b1d43e0a5707c28423293148bca6c87 376 Pfam PF01546 Peptidase family M20/M25/M40 63 372 1.5E-44 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 D172_009965 0b1d43e0a5707c28423293148bca6c87 376 SUPERFAMILY SSF53187 4 375 1.23E-64 T 14-10-2018 D172_001995 051112e3a75c8bd144fbe4f3371b0104 343 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 47.406 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 D172_001995 051112e3a75c8bd144fbe4f3371b0104 343 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 1.4E-157 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 D172_001995 051112e3a75c8bd144fbe4f3371b0104 343 SUPERFAMILY SSF111337 1 340 2.49E-138 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 D172_001995 051112e3a75c8bd144fbe4f3371b0104 343 Pfam PF02547 Queuosine biosynthesis protein 4 340 3.1E-133 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 D172_001995 051112e3a75c8bd144fbe4f3371b0104 343 Gene3D G3DSA:2.40.10.240 64 161 2.8E-120 T 14-10-2018 D172_001995 051112e3a75c8bd144fbe4f3371b0104 343 Gene3D G3DSA:3.40.1780.10 14 339 2.8E-120 T 14-10-2018 D172_005560 1d398328b0ec13f9423356b8e85f50e9 202 SUPERFAMILY SSF53955 7 161 3.44E-23 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily D172_005560 1d398328b0ec13f9423356b8e85f50e9 202 Gene3D G3DSA:1.10.530.10 36 185 3.4E-12 T 14-10-2018 D172_009845 11e0c3d6456b22a7c39176ce7601cedb 498 SUPERFAMILY SSF51905 4 423 1.78E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_009845 11e0c3d6456b22a7c39176ce7601cedb 498 Gene3D G3DSA:3.50.50.60 1 498 4.4E-187 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_009845 11e0c3d6456b22a7c39176ce7601cedb 498 Pfam PF04820 Tryptophan halogenase 7 459 8.2E-179 T 14-10-2018 IPR006905 Flavin-dependent halogenase D172_009845 11e0c3d6456b22a7c39176ce7601cedb 498 PIRSF PIRSF011396 1 498 1.4E-200 T 14-10-2018 IPR033856 Flavin-dependent tryptophan halogenase D172_019605 b4f8fda93f9b9e92623c8a33a4935b46 226 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 4 223 2.0E-54 T 14-10-2018 IPR012807 Anti-sigma factor ChrR, putative D172_019605 b4f8fda93f9b9e92623c8a33a4935b46 226 Gene3D G3DSA:2.60.120.10 118 206 1.4E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_019605 b4f8fda93f9b9e92623c8a33a4935b46 226 SUPERFAMILY SSF51182 134 205 1.03E-16 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily D172_019605 b4f8fda93f9b9e92623c8a33a4935b46 226 Gene3D G3DSA:1.10.10.1320 1 117 1.2E-13 T 14-10-2018 D172_019605 b4f8fda93f9b9e92623c8a33a4935b46 226 Pfam PF12973 ChrR Cupin-like domain 138 201 5.4E-16 T 14-10-2018 IPR025979 ChrR-like cupin domain D172_005345 9d498e5eea5e6584882b4b13e1ec897f 915 Gene3D G3DSA:3.60.21.10 183 465 9.6E-41 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like D172_005345 9d498e5eea5e6584882b4b13e1ec897f 915 Pfam PF00149 Calcineurin-like phosphoesterase 186 395 4.1E-9 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D172_005345 9d498e5eea5e6584882b4b13e1ec897f 915 SUPERFAMILY SSF56300 184 464 8.92E-44 T 14-10-2018 D172_005345 9d498e5eea5e6584882b4b13e1ec897f 915 PRINTS PR01607 Apyrase family signature 407 427 5.9E-7 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D172_005345 9d498e5eea5e6584882b4b13e1ec897f 915 PRINTS PR01607 Apyrase family signature 379 402 5.9E-7 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D172_005345 9d498e5eea5e6584882b4b13e1ec897f 915 PRINTS PR01607 Apyrase family signature 183 201 5.9E-7 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D172_005345 9d498e5eea5e6584882b4b13e1ec897f 915 PRINTS PR01607 Apyrase family signature 360 377 5.9E-7 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D172_005345 9d498e5eea5e6584882b4b13e1ec897f 915 SUPERFAMILY SSF49899 716 863 4.16E-6 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D172_008355 c860441c7e94e88aa9e0356e8b7ecd80 505 Gene3D G3DSA:3.30.559.10 273 505 3.6E-96 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 D172_008355 c860441c7e94e88aa9e0356e8b7ecd80 505 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 139 168 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 D172_008355 c860441c7e94e88aa9e0356e8b7ecd80 505 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 D172_008355 c860441c7e94e88aa9e0356e8b7ecd80 505 SUPERFAMILY SSF47005 209 253 1.44E-11 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 D172_008355 c860441c7e94e88aa9e0356e8b7ecd80 505 Gene3D G3DSA:4.10.320.10 212 254 2.4E-17 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 D172_008355 c860441c7e94e88aa9e0356e8b7ecd80 505 SUPERFAMILY SSF51230 115 207 9.42E-23 T 14-10-2018 IPR011053 Single hybrid motif D172_008355 c860441c7e94e88aa9e0356e8b7ecd80 505 Gene3D G3DSA:2.40.50.100 110 211 1.9E-19 T 14-10-2018 D172_008355 c860441c7e94e88aa9e0356e8b7ecd80 505 Gene3D G3DSA:2.40.50.100 1 101 4.6E-20 T 14-10-2018 D172_008355 c860441c7e94e88aa9e0356e8b7ecd80 505 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 275 503 1.5E-80 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 D172_008355 c860441c7e94e88aa9e0356e8b7ecd80 505 SUPERFAMILY SSF52777 277 504 5.78E-88 T 14-10-2018 D172_008355 c860441c7e94e88aa9e0356e8b7ecd80 505 Pfam PF02817 e3 binding domain 216 248 1.5E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 D172_008355 c860441c7e94e88aa9e0356e8b7ecd80 505 Pfam PF00364 Biotin-requiring enzyme 4 74 2.9E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment D172_008355 c860441c7e94e88aa9e0356e8b7ecd80 505 Pfam PF00364 Biotin-requiring enzyme 116 185 1.1E-15 T 14-10-2018 IPR000089 Biotin/lipoyl attachment D172_008355 c860441c7e94e88aa9e0356e8b7ecd80 505 SUPERFAMILY SSF51230 1 95 4.45E-23 T 14-10-2018 IPR011053 Single hybrid motif D172_008355 c860441c7e94e88aa9e0356e8b7ecd80 505 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 115 505 1.9E-180 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 D172_000590 757c97193945269e46b595c339459fac 156 Pfam PF11026 Protein of unknown function (DUF2721) 18 144 6.8E-33 T 14-10-2018 IPR021279 Protein of unknown function DUF2721 D172_019110 d9581b7975c668c76026abeb54cd8c56 389 Gene3D G3DSA:1.10.287.470 96 169 1.1E-80 T 14-10-2018 D172_019110 d9581b7975c668c76026abeb54cd8c56 389 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 363 6.5E-74 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D172_019110 d9581b7975c668c76026abeb54cd8c56 389 SUPERFAMILY SSF111369 53 288 6.15E-51 T 14-10-2018 D172_019110 d9581b7975c668c76026abeb54cd8c56 389 Gene3D G3DSA:2.40.50.100 61 204 1.1E-80 T 14-10-2018 D172_019110 d9581b7975c668c76026abeb54cd8c56 389 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 283 5.3E-19 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D172_019110 d9581b7975c668c76026abeb54cd8c56 389 Gene3D G3DSA:2.40.420.20 294 362 1.1E-80 T 14-10-2018 D172_019110 d9581b7975c668c76026abeb54cd8c56 389 Gene3D G3DSA:2.40.30.170 50 293 1.1E-80 T 14-10-2018 D172_001860 0f786c6154cbf702e571c5df175887fd 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 65 76 2.4E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001860 0f786c6154cbf702e571c5df175887fd 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 157 2.4E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001860 0f786c6154cbf702e571c5df175887fd 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.4E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001860 0f786c6154cbf702e571c5df175887fd 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 176 2.4E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001860 0f786c6154cbf702e571c5df175887fd 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 112 128 2.4E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001860 0f786c6154cbf702e571c5df175887fd 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 2.4E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001860 0f786c6154cbf702e571c5df175887fd 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 65 76 6.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001860 0f786c6154cbf702e571c5df175887fd 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 157 6.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001860 0f786c6154cbf702e571c5df175887fd 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 118 126 6.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_001860 0f786c6154cbf702e571c5df175887fd 242 SUPERFAMILY SSF51735 3 241 6.45E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_001860 0f786c6154cbf702e571c5df175887fd 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 240 2.3E-45 T 14-10-2018 D172_001860 0f786c6154cbf702e571c5df175887fd 242 Gene3D G3DSA:3.40.50.720 1 242 5.1E-65 T 14-10-2018 D172_014205 180c6bcd8228569f247760f2041a2ccf 109 PIRSF PIRSF025560 1 109 6.7E-33 T 14-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 D172_014205 180c6bcd8228569f247760f2041a2ccf 109 Pfam PF07027 Protein of unknown function (DUF1318) 21 109 1.6E-31 T 14-10-2018 IPR008309 Uncharacterised conserved protein UCP025560 D172_006440 618a3db9c1b0f928fbfcafc3158c34c7 228 Gene3D G3DSA:1.10.8.60 162 228 4.4E-27 T 14-10-2018 D172_006440 618a3db9c1b0f928fbfcafc3158c34c7 228 SUPERFAMILY SSF52540 8 207 4.41E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006440 618a3db9c1b0f928fbfcafc3158c34c7 228 Gene3D G3DSA:3.40.50.300 1 158 5.6E-28 T 14-10-2018 D172_006440 618a3db9c1b0f928fbfcafc3158c34c7 228 Pfam PF00308 Bacterial dnaA protein 89 207 2.7E-17 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA D172_006440 618a3db9c1b0f928fbfcafc3158c34c7 228 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 2 227 5.3E-74 T 14-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 D172_012160 116a4e50b8e7b17ebe5fef54a6f856cf 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 3.9E-39 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS D172_012160 116a4e50b8e7b17ebe5fef54a6f856cf 105 Pfam PF02410 Ribosomal silencing factor during starvation 12 104 2.9E-29 T 14-10-2018 D172_012160 116a4e50b8e7b17ebe5fef54a6f856cf 105 SUPERFAMILY SSF81301 2 105 2.29E-39 T 14-10-2018 D172_012160 116a4e50b8e7b17ebe5fef54a6f856cf 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 25.3 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS D172_012160 116a4e50b8e7b17ebe5fef54a6f856cf 105 Gene3D G3DSA:3.30.460.10 1 105 1.0E-38 T 14-10-2018 D172_019295 11c9db3f132e4a9e91557efaee0ad742 260 SMART SM00563 91 199 9.3E-22 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D172_019295 11c9db3f132e4a9e91557efaee0ad742 260 SUPERFAMILY SSF69593 31 195 7.59E-24 T 14-10-2018 D172_019295 11c9db3f132e4a9e91557efaee0ad742 260 Pfam PF01553 Acyltransferase 78 196 4.5E-18 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D172_018755 e2e7ac7caccb37a34773a868c60aab9f 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 4.7E-12 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D172_018755 e2e7ac7caccb37a34773a868c60aab9f 128 Gene3D G3DSA:3.10.180.10 8 127 2.2E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_018755 e2e7ac7caccb37a34773a868c60aab9f 128 SUPERFAMILY SSF54593 3 127 9.63E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_008535 ef8e1b9c074c7344c665e807ae6d68eb 346 Gene3D G3DSA:3.40.190.10 144 327 2.8E-70 T 14-10-2018 D172_008535 ef8e1b9c074c7344c665e807ae6d68eb 346 SUPERFAMILY SSF53850 46 334 1.78E-48 T 14-10-2018 D172_008535 ef8e1b9c074c7344c665e807ae6d68eb 346 PIRSF PIRSF002825 1 346 7.6E-92 T 14-10-2018 IPR026045 Ferric binding protein D172_008535 ef8e1b9c074c7344c665e807ae6d68eb 346 Pfam PF13343 Bacterial extracellular solute-binding protein 100 317 1.0E-11 T 14-10-2018 D172_008535 ef8e1b9c074c7344c665e807ae6d68eb 346 Gene3D G3DSA:3.40.190.10 47 315 2.8E-70 T 14-10-2018 D172_003330 4f4fe3d97ca7c8de2dcc9b41c5707bab 310 PIRSF PIRSF006621 1 309 1.3E-64 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 D172_003330 4f4fe3d97ca7c8de2dcc9b41c5707bab 310 Pfam PF01207 Dihydrouridine synthase (Dus) 1 296 1.0E-82 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 D172_003330 4f4fe3d97ca7c8de2dcc9b41c5707bab 310 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 310 47.761 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 D172_003330 4f4fe3d97ca7c8de2dcc9b41c5707bab 310 Gene3D G3DSA:3.20.20.70 1 233 9.3E-68 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_003330 4f4fe3d97ca7c8de2dcc9b41c5707bab 310 SUPERFAMILY SSF51395 1 290 1.1E-67 T 14-10-2018 D172_003330 4f4fe3d97ca7c8de2dcc9b41c5707bab 310 Gene3D G3DSA:1.20.120.1460 236 310 1.4E-26 T 14-10-2018 D172_003330 4f4fe3d97ca7c8de2dcc9b41c5707bab 310 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 76 94 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 D172_003330 4f4fe3d97ca7c8de2dcc9b41c5707bab 310 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 309 3.8E-144 T 14-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 D172_020980 71a184d16ca8e50ba8393a378efd8ea2 356 Pfam PF03601 Conserved hypothetical protein 698 23 334 1.3E-96 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 D172_020980 71a184d16ca8e50ba8393a378efd8ea2 356 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 23 353 1.7E-100 T 14-10-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 D172_010675 1bca85628b8e59cf7a9d4270b7a59926 72 Gene3D G3DSA:1.10.260.40 1 72 1.2E-18 T 14-10-2018 D172_010675 1bca85628b8e59cf7a9d4270b7a59926 72 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 4 66 2.5E-18 T 14-10-2018 IPR031856 Putative bacterial antitoxin YdaS D172_010675 1bca85628b8e59cf7a9d4270b7a59926 72 SUPERFAMILY SSF47413 4 62 4.12E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D172_019615 6a99d3b615f6f79d0020a389640ff8f9 464 Gene3D G3DSA:1.10.579.10 286 464 2.0E-77 T 14-10-2018 D172_019615 6a99d3b615f6f79d0020a389640ff8f9 464 Gene3D G3DSA:1.25.40.80 133 279 6.8E-63 T 14-10-2018 D172_019615 6a99d3b615f6f79d0020a389640ff8f9 464 Pfam PF03441 FAD binding domain of DNA photolyase 268 463 2.4E-83 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 D172_019615 6a99d3b615f6f79d0020a389640ff8f9 464 SUPERFAMILY SSF52425 3 184 1.7E-44 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 D172_019615 6a99d3b615f6f79d0020a389640ff8f9 464 SUPERFAMILY SSF48173 188 463 1.83E-101 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 D172_019615 6a99d3b615f6f79d0020a389640ff8f9 464 Pfam PF00875 DNA photolyase 4 164 6.1E-38 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 D172_019615 6a99d3b615f6f79d0020a389640ff8f9 464 Gene3D G3DSA:3.40.50.620 4 195 6.8E-63 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_019615 6a99d3b615f6f79d0020a389640ff8f9 464 PRINTS PR00147 DNA photolyase signature 142 158 4.0E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 D172_019615 6a99d3b615f6f79d0020a389640ff8f9 464 PRINTS PR00147 DNA photolyase signature 318 334 4.0E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 D172_019615 6a99d3b615f6f79d0020a389640ff8f9 464 PRINTS PR00147 DNA photolyase signature 338 356 4.0E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 D172_019615 6a99d3b615f6f79d0020a389640ff8f9 464 PRINTS PR00147 DNA photolyase signature 377 391 4.0E-29 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 D172_019615 6a99d3b615f6f79d0020a389640ff8f9 464 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 338 357 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal D172_017680 2aea5b53b79dc82335e3f76230e279d0 388 Gene3D G3DSA:3.40.50.1820 64 291 7.7E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_017680 2aea5b53b79dc82335e3f76230e279d0 388 SUPERFAMILY SSF53474 78 229 4.45E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_017680 2aea5b53b79dc82335e3f76230e279d0 388 Pfam PF01764 Lipase (class 3) 82 211 5.6E-25 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 D172_003065 40414bcdefec8b87c99a07919c6300f0 197 Pfam PF04542 Sigma-70 region 2 42 98 6.5E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D172_003065 40414bcdefec8b87c99a07919c6300f0 197 Gene3D G3DSA:1.10.10.10 130 192 2.4E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_003065 40414bcdefec8b87c99a07919c6300f0 197 SUPERFAMILY SSF88659 134 190 4.14E-6 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_003065 40414bcdefec8b87c99a07919c6300f0 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 189 4.1E-14 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D172_003065 40414bcdefec8b87c99a07919c6300f0 197 SUPERFAMILY SSF88946 19 109 6.28E-18 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D172_003065 40414bcdefec8b87c99a07919c6300f0 197 Gene3D G3DSA:1.10.1740.10 9 95 3.2E-18 T 14-10-2018 D172_017405 f83d13c4bbd269f0cadaa1a0d5cd9e21 278 Gene3D G3DSA:3.30.420.10 106 240 3.7E-13 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_017405 f83d13c4bbd269f0cadaa1a0d5cd9e21 278 SUPERFAMILY SSF53098 101 263 4.05E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_017405 f83d13c4bbd269f0cadaa1a0d5cd9e21 278 Pfam PF00665 Integrase core domain 109 223 1.6E-31 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_002595 3e0ed38ef5b605756a41124fe5865215 217 SUPERFAMILY SSF55120 7 214 1.07E-65 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_002595 3e0ed38ef5b605756a41124fe5865215 217 Gene3D G3DSA:3.30.2350.10 3 216 1.8E-71 T 14-10-2018 D172_002595 3e0ed38ef5b605756a41124fe5865215 217 Pfam PF00849 RNA pseudouridylate synthase 21 167 2.4E-30 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_002595 3e0ed38ef5b605756a41124fe5865215 217 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 8 214 1.5E-61 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_019075 021039c12d09520b19e097ba562270c4 342 Pfam PF02625 XdhC and CoxI family 16 81 9.4E-16 T 14-10-2018 IPR003777 XdhC- CoxI D172_019075 021039c12d09520b19e097ba562270c4 342 Pfam PF13478 XdhC Rossmann domain 183 322 6.6E-27 T 14-10-2018 IPR027051 XdhC Rossmann domain D172_019075 021039c12d09520b19e097ba562270c4 342 Gene3D G3DSA:3.40.50.720 181 341 5.8E-38 T 14-10-2018 D172_013275 60f77234630c39f8b10046561356ae65 228 PIRSF PIRSF002764 4 228 8.6E-81 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria D172_013275 60f77234630c39f8b10046561356ae65 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 164 183 3.3E-63 T 14-10-2018 D172_013275 60f77234630c39f8b10046561356ae65 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 84 107 3.3E-63 T 14-10-2018 D172_013275 60f77234630c39f8b10046561356ae65 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 109 127 3.3E-63 T 14-10-2018 D172_013275 60f77234630c39f8b10046561356ae65 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 35 56 3.3E-63 T 14-10-2018 D172_013275 60f77234630c39f8b10046561356ae65 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 201 224 3.3E-63 T 14-10-2018 D172_013275 60f77234630c39f8b10046561356ae65 228 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 61 78 3.3E-63 T 14-10-2018 D172_013275 60f77234630c39f8b10046561356ae65 228 Pfam PF03379 CcmB protein 12 225 1.4E-83 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013275 60f77234630c39f8b10046561356ae65 228 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 15 224 4.7E-86 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria D172_016740 98148c6ca988a15de5c51b591892fc17 332 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 14-10-2018 IPR019775 WD40 repeat, conserved site D172_016740 98148c6ca988a15de5c51b591892fc17 332 SUPERFAMILY SSF50998 34 317 4.24E-49 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily D172_016740 98148c6ca988a15de5c51b591892fc17 332 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 49 63 - T 14-10-2018 IPR019775 WD40 repeat, conserved site D172_016740 98148c6ca988a15de5c51b591892fc17 332 Gene3D G3DSA:2.130.10.10 155 331 6.6E-31 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_016740 98148c6ca988a15de5c51b591892fc17 332 Pfam PF00400 WD domain, G-beta repeat 157 189 4.4E-4 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 D172_016740 98148c6ca988a15de5c51b591892fc17 332 Gene3D G3DSA:2.130.10.10 14 154 8.1E-14 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_016740 98148c6ca988a15de5c51b591892fc17 332 SMART SM00320 23 62 71.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 D172_016740 98148c6ca988a15de5c51b591892fc17 332 SMART SM00320 109 148 61.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 D172_016740 98148c6ca988a15de5c51b591892fc17 332 SMART SM00320 233 274 0.61 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 D172_016740 98148c6ca988a15de5c51b591892fc17 332 SMART SM00320 150 189 4.4E-5 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 D172_016740 98148c6ca988a15de5c51b591892fc17 332 SMART SM00320 192 230 1.0 T 14-10-2018 IPR001680 WD40 repeat GO:0005515 D172_005905 22d3573cdc0dcbfef342d1ee4d1ccf29 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 D172_005905 22d3573cdc0dcbfef342d1ee4d1ccf29 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 1.6E-41 T 14-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 D172_005905 22d3573cdc0dcbfef342d1ee4d1ccf29 87 Gene3D G3DSA:3.40.30.10 3 85 1.5E-22 T 14-10-2018 D172_005905 22d3573cdc0dcbfef342d1ee4d1ccf29 87 PRINTS PR00160 Glutaredoxin signature 66 79 2.0E-8 T 14-10-2018 IPR014025 Glutaredoxin subgroup D172_005905 22d3573cdc0dcbfef342d1ee4d1ccf29 87 PRINTS PR00160 Glutaredoxin signature 52 65 2.0E-8 T 14-10-2018 IPR014025 Glutaredoxin subgroup D172_005905 22d3573cdc0dcbfef342d1ee4d1ccf29 87 PRINTS PR00160 Glutaredoxin signature 3 21 2.0E-8 T 14-10-2018 IPR014025 Glutaredoxin subgroup D172_005905 22d3573cdc0dcbfef342d1ee4d1ccf29 87 Pfam PF00462 Glutaredoxin 4 69 1.7E-14 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 D172_005905 22d3573cdc0dcbfef342d1ee4d1ccf29 87 SUPERFAMILY SSF52833 4 82 4.33E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_013060 8c7a622b7589047effb37f338c618700 384 Pfam PF00144 Beta-lactamase 41 362 4.9E-51 T 14-10-2018 IPR001466 Beta-lactamase-related D172_013060 8c7a622b7589047effb37f338c618700 384 Gene3D G3DSA:3.40.710.10 33 375 1.3E-67 T 14-10-2018 D172_013060 8c7a622b7589047effb37f338c618700 384 SUPERFAMILY SSF56601 41 375 1.88E-66 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D172_002580 5ae607169f27efd187a4e98fb94979dc 219 Gene3D G3DSA:3.90.550.10 1 219 6.7E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_002580 5ae607169f27efd187a4e98fb94979dc 219 Pfam PF00483 Nucleotidyl transferase 2 140 4.0E-24 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 D172_002580 5ae607169f27efd187a4e98fb94979dc 219 SUPERFAMILY SSF53448 1 216 2.19E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_015990 f0e5d0b3cc1cc9de3cafe291a42b2b5e 366 Gene3D G3DSA:3.90.1200.10 119 348 2.1E-9 T 14-10-2018 D172_015990 f0e5d0b3cc1cc9de3cafe291a42b2b5e 366 SUPERFAMILY SSF56112 11 342 7.14E-28 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily D172_015990 f0e5d0b3cc1cc9de3cafe291a42b2b5e 366 Pfam PF01636 Phosphotransferase enzyme family 22 255 1.6E-17 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase D172_005140 746f20d8f355f9df8d68156ec523b594 432 SUPERFAMILY SSF58104 221 430 1.57E-48 T 14-10-2018 D172_005140 746f20d8f355f9df8d68156ec523b594 432 SUPERFAMILY SSF55785 31 132 6.63E-18 T 14-10-2018 IPR035965 PAS domain superfamily D172_005140 746f20d8f355f9df8d68156ec523b594 432 Gene3D G3DSA:1.10.287.950 250 432 3.5E-42 T 14-10-2018 D172_005140 746f20d8f355f9df8d68156ec523b594 432 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 353 382 1.7E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_005140 746f20d8f355f9df8d68156ec523b594 432 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 251 280 1.7E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_005140 746f20d8f355f9df8d68156ec523b594 432 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 1.7E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_005140 746f20d8f355f9df8d68156ec523b594 432 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 324 351 1.7E-26 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_005140 746f20d8f355f9df8d68156ec523b594 432 Gene3D G3DSA:3.30.450.20 156 249 2.4E-18 T 14-10-2018 D172_005140 746f20d8f355f9df8d68156ec523b594 432 SMART SM00283 230 431 8.0E-21 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_005140 746f20d8f355f9df8d68156ec523b594 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 139 8.5E-14 T 14-10-2018 IPR000014 PAS domain D172_005140 746f20d8f355f9df8d68156ec523b594 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 260 2.5E-14 T 14-10-2018 IPR000014 PAS domain D172_005140 746f20d8f355f9df8d68156ec523b594 432 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 298 430 9.6E-36 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_005140 746f20d8f355f9df8d68156ec523b594 432 SUPERFAMILY SSF55785 154 255 3.49E-20 T 14-10-2018 IPR035965 PAS domain superfamily D172_005140 746f20d8f355f9df8d68156ec523b594 432 SMART SM00086 213 255 7.9E-7 T 14-10-2018 IPR001610 PAC motif D172_005140 746f20d8f355f9df8d68156ec523b594 432 SMART SM00086 94 135 1.5 T 14-10-2018 IPR001610 PAC motif D172_005140 746f20d8f355f9df8d68156ec523b594 432 Pfam PF13426 PAS domain 39 134 2.6E-10 T 14-10-2018 IPR000014 PAS domain D172_005140 746f20d8f355f9df8d68156ec523b594 432 Pfam PF13426 PAS domain 159 254 7.7E-12 T 14-10-2018 IPR000014 PAS domain D172_005140 746f20d8f355f9df8d68156ec523b594 432 Gene3D G3DSA:3.30.450.20 16 155 8.1E-18 T 14-10-2018 D172_015550 621fbc053a5db11395f9b66dae75da76 251 Gene3D G3DSA:3.40.50.150 57 251 2.1E-75 T 14-10-2018 D172_015550 621fbc053a5db11395f9b66dae75da76 251 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 1 248 37.838 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 D172_015550 621fbc053a5db11395f9b66dae75da76 251 Pfam PF04445 Putative SAM-dependent methyltransferase 19 247 1.4E-103 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 D172_015550 621fbc053a5db11395f9b66dae75da76 251 SUPERFAMILY SSF53335 13 247 3.34E-73 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_003660 b02907ef896d921ca290b2eafea0c50b 341 Pfam PF08468 Methyltransferase small domain N-terminal 8 164 8.5E-41 T 14-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 D172_003660 b02907ef896d921ca290b2eafea0c50b 341 Gene3D G3DSA:3.40.50.150 160 341 1.2E-39 T 14-10-2018 D172_003660 b02907ef896d921ca290b2eafea0c50b 341 Gene3D G3DSA:3.40.50.150 1 159 9.3E-43 T 14-10-2018 D172_003660 b02907ef896d921ca290b2eafea0c50b 341 Pfam PF05175 Methyltransferase small domain 175 339 9.5E-48 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 D172_003660 b02907ef896d921ca290b2eafea0c50b 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 272 278 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D172_003660 b02907ef896d921ca290b2eafea0c50b 341 SUPERFAMILY SSF53335 169 320 1.13E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_003660 b02907ef896d921ca290b2eafea0c50b 341 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 341 39.724 T 14-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 D172_005925 474d2a7fe3c6c59e2316bacae493c900 474 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D172_005925 474d2a7fe3c6c59e2316bacae493c900 474 ProSitePatterns PS00216 Sugar transport proteins signature 1. 326 343 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D172_005925 474d2a7fe3c6c59e2316bacae493c900 474 SUPERFAMILY SSF103473 12 472 7.46E-71 T 14-10-2018 IPR036259 MFS transporter superfamily D172_005925 474d2a7fe3c6c59e2316bacae493c900 474 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 96 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D172_005925 474d2a7fe3c6c59e2316bacae493c900 474 Pfam PF00083 Sugar (and other) transporter 27 474 5.7E-114 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 D172_005925 474d2a7fe3c6c59e2316bacae493c900 474 PRINTS PR00171 Sugar transporter signature 402 414 5.0E-24 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_005925 474d2a7fe3c6c59e2316bacae493c900 474 PRINTS PR00171 Sugar transporter signature 282 292 5.0E-24 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_005925 474d2a7fe3c6c59e2316bacae493c900 474 PRINTS PR00171 Sugar transporter signature 379 400 5.0E-24 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_005925 474d2a7fe3c6c59e2316bacae493c900 474 PRINTS PR00171 Sugar transporter signature 33 43 5.0E-24 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_005925 474d2a7fe3c6c59e2316bacae493c900 474 PRINTS PR00171 Sugar transporter signature 116 135 5.0E-24 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_005925 474d2a7fe3c6c59e2316bacae493c900 474 Gene3D G3DSA:1.20.1250.20 16 474 1.6E-121 T 14-10-2018 D172_005925 474d2a7fe3c6c59e2316bacae493c900 474 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 17 473 4.8E-112 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 D172_007825 9518ff9612c02bf272f4e454f687750b 290 Gene3D G3DSA:3.90.1200.10 96 289 8.6E-58 T 14-10-2018 D172_007825 9518ff9612c02bf272f4e454f687750b 290 Gene3D G3DSA:3.30.200.20 1 93 3.3E-11 T 14-10-2018 D172_007825 9518ff9612c02bf272f4e454f687750b 290 SUPERFAMILY SSF56112 17 276 3.74E-30 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily D172_007825 9518ff9612c02bf272f4e454f687750b 290 PIRSF PIRSF006221 1 288 8.8E-81 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 D172_007825 9518ff9612c02bf272f4e454f687750b 290 Pfam PF03881 Fructosamine kinase 1 284 2.1E-96 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 D172_010325 09199000d9fbe0300434cfbbe9d7ac30 121 Pfam PF07883 Cupin domain 36 96 1.6E-11 T 14-10-2018 IPR013096 Cupin 2, conserved barrel D172_010325 09199000d9fbe0300434cfbbe9d7ac30 121 Gene3D G3DSA:2.60.120.10 1 101 2.1E-37 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_010325 09199000d9fbe0300434cfbbe9d7ac30 121 SUPERFAMILY SSF51182 3 110 1.23E-27 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily D172_013885 effe7c229edb13e4864f2bcd488cd837 178 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 162 35.835 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_013885 effe7c229edb13e4864f2bcd488cd837 178 SUPERFAMILY SSF55068 3 168 5.49E-72 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_013885 effe7c229edb13e4864f2bcd488cd837 178 Gene3D G3DSA:3.30.1060.10 1 165 8.8E-72 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_013885 effe7c229edb13e4864f2bcd488cd837 178 Pfam PF01625 Peptide methionine sulfoxide reductase 8 158 4.0E-64 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_013885 effe7c229edb13e4864f2bcd488cd837 178 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 7 157 1.2E-58 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 D172_007770 e98d5125eb64b133026510c9e3b4b5fe 943 Pfam PF00593 TonB dependent receptor 412 941 8.1E-35 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_007770 e98d5125eb64b133026510c9e3b4b5fe 943 Gene3D G3DSA:2.170.130.10 35 159 2.0E-16 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_007770 e98d5125eb64b133026510c9e3b4b5fe 943 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 148 4.5E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_007770 e98d5125eb64b133026510c9e3b4b5fe 943 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 36 943 8.0E-197 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_007770 e98d5125eb64b133026510c9e3b4b5fe 943 SUPERFAMILY SSF56935 33 943 7.12E-84 T 14-10-2018 D172_003870 907ba52e053f4a3cfafd7ba71f345654 113 SMART SM00507 19 73 2.0E-5 T 14-10-2018 IPR003615 HNH nuclease D172_003870 907ba52e053f4a3cfafd7ba71f345654 113 Pfam PF01844 HNH endonuclease 30 78 2.3E-11 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 D172_015005 cac34c14054a971167457e2691160840 324 PIRSF PIRSF015753 5 323 2.5E-133 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 D172_015005 cac34c14054a971167457e2691160840 324 Gene3D G3DSA:3.40.30.130 1 179 5.6E-73 T 14-10-2018 D172_015005 cac34c14054a971167457e2691160840 324 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 157 7.4E-22 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D172_015005 cac34c14054a971167457e2691160840 324 SUPERFAMILY SSF52833 42 161 4.67E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_015005 cac34c14054a971167457e2691160840 324 Gene3D G3DSA:1.20.1050.10 180 323 1.2E-64 T 14-10-2018 D172_015005 cac34c14054a971167457e2691160840 324 SUPERFAMILY SSF47616 177 322 1.38E-31 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D172_015005 cac34c14054a971167457e2691160840 324 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 274 1.8E-10 T 14-10-2018 D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 SMART SM00388 301 366 6.9E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 524 8.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 481 8.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 467 8.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 8.9E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 Gene3D G3DSA:1.10.287.130 277 364 2.0E-19 T 14-10-2018 D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 Pfam PF00072 Response regulator receiver domain 550 663 5.0E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 Gene3D G3DSA:3.30.450.20 163 276 1.3E-13 T 14-10-2018 D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 Gene3D G3DSA:3.30.565.10 365 529 4.0E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 Pfam PF00512 His Kinase A (phospho-acceptor) domain 302 366 6.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 414 524 3.7E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 SMART SM00387 413 527 5.5E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 Pfam PF01590 GAF domain 30 151 8.5E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 SUPERFAMILY SSF55874 355 526 1.83E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 Gene3D G3DSA:3.40.50.12740 547 674 1.8E-34 T 14-10-2018 D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 SUPERFAMILY SSF55785 175 280 1.74E-10 T 14-10-2018 IPR035965 PAS domain superfamily D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 SUPERFAMILY SSF55781 18 162 3.49E-16 T 14-10-2018 D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 Gene3D G3DSA:3.30.450.40 1 162 9.2E-9 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 SUPERFAMILY SSF52172 548 668 3.13E-31 T 14-10-2018 IPR011006 CheY-like superfamily D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 SUPERFAMILY SSF47384 284 367 1.33E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_018540 21c5c8bb29c5a7b120bc8ef191bfbeaa 674 SMART SM00448 548 663 3.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_009220 3b7d5dcfc8b3b15923e11fe0c4503459 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 D172_009220 3b7d5dcfc8b3b15923e11fe0c4503459 482 Gene3D G3DSA:3.40.309.10 253 446 6.1E-178 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D172_009220 3b7d5dcfc8b3b15923e11fe0c4503459 482 Gene3D G3DSA:3.40.605.10 22 475 6.1E-178 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D172_009220 3b7d5dcfc8b3b15923e11fe0c4503459 482 SUPERFAMILY SSF53720 8 480 5.63E-154 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D172_009220 3b7d5dcfc8b3b15923e11fe0c4503459 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 D172_009220 3b7d5dcfc8b3b15923e11fe0c4503459 482 Pfam PF00171 Aldehyde dehydrogenase family 16 477 3.4E-159 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D172_015930 0dd1e14bb61c01866dd0bfc482f3d2a9 343 Pfam PF13528 Glycosyl transferase family 1 1 298 1.4E-37 T 14-10-2018 D172_015930 0dd1e14bb61c01866dd0bfc482f3d2a9 343 SUPERFAMILY SSF53756 1 292 7.22E-7 T 14-10-2018 D172_015930 0dd1e14bb61c01866dd0bfc482f3d2a9 343 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 311 5.4E-65 T 14-10-2018 IPR005262 Conserved hypothetical protein CHP00661 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 Gene3D G3DSA:3.20.20.10 66 345 7.9E-221 T 14-10-2018 IPR029066 PLP-binding barrel D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 SUPERFAMILY SSF50621 446 564 5.96E-7 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 PIRSF PIRSF001336 1 626 4.0E-234 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 SUPERFAMILY SSF51419 66 342 2.45E-62 T 14-10-2018 IPR029066 PLP-binding barrel D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 TIGRFAM TIGR01273 speA: arginine decarboxylase 4 624 1.0E-238 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 Gene3D G3DSA:1.20.58.930 362 454 7.9E-221 T 14-10-2018 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 83 340 1.3E-47 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 PRINTS PR01180 Arginine decarboxylase signature 169 190 2.4E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 PRINTS PR01180 Arginine decarboxylase signature 143 158 2.4E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 PRINTS PR01180 Arginine decarboxylase signature 193 215 2.4E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 PRINTS PR01180 Arginine decarboxylase signature 536 557 2.4E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 PRINTS PR01180 Arginine decarboxylase signature 458 479 2.4E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 PRINTS PR01180 Arginine decarboxylase signature 483 508 2.4E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 PRINTS PR01180 Arginine decarboxylase signature 320 337 2.4E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 PRINTS PR01180 Arginine decarboxylase signature 65 80 2.4E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 PRINTS PR01180 Arginine decarboxylase signature 89 103 2.4E-65 T 14-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 Gene3D G3DSA:2.40.37.10 12 563 7.9E-221 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 236 249 1.7E-16 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 330 349 1.7E-16 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 120 132 1.7E-16 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 97 115 1.7E-16 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_016405 6fb72e79f16d364219d82a3a4f8c3ca3 626 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 536 549 1.7E-16 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 D172_018955 108372ef9b59e62b2d348b7d4a866a2a 539 Pfam PF00149 Calcineurin-like phosphoesterase 29 250 8.0E-17 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D172_018955 108372ef9b59e62b2d348b7d4a866a2a 539 ProSitePatterns PS00785 5'-nucleotidase signature 1. 29 41 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D172_018955 108372ef9b59e62b2d348b7d4a866a2a 539 SUPERFAMILY SSF56300 26 332 1.14E-88 T 14-10-2018 D172_018955 108372ef9b59e62b2d348b7d4a866a2a 539 PRINTS PR01607 Apyrase family signature 202 219 4.2E-45 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D172_018955 108372ef9b59e62b2d348b7d4a866a2a 539 PRINTS PR01607 Apyrase family signature 27 45 4.2E-45 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D172_018955 108372ef9b59e62b2d348b7d4a866a2a 539 PRINTS PR01607 Apyrase family signature 233 256 4.2E-45 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D172_018955 108372ef9b59e62b2d348b7d4a866a2a 539 PRINTS PR01607 Apyrase family signature 278 298 4.2E-45 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D172_018955 108372ef9b59e62b2d348b7d4a866a2a 539 PRINTS PR01607 Apyrase family signature 412 435 4.2E-45 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D172_018955 108372ef9b59e62b2d348b7d4a866a2a 539 PRINTS PR01607 Apyrase family signature 479 498 4.2E-45 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D172_018955 108372ef9b59e62b2d348b7d4a866a2a 539 ProSitePatterns PS00786 5'-nucleotidase signature 2. 104 115 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D172_018955 108372ef9b59e62b2d348b7d4a866a2a 539 Gene3D G3DSA:3.60.21.10 23 357 2.2E-113 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like D172_018955 108372ef9b59e62b2d348b7d4a866a2a 539 SUPERFAMILY SSF55816 359 533 4.19E-47 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D172_018955 108372ef9b59e62b2d348b7d4a866a2a 539 Gene3D G3DSA:3.90.780.10 358 539 3.3E-54 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D172_018955 108372ef9b59e62b2d348b7d4a866a2a 539 Pfam PF02872 5'-nucleotidase, C-terminal domain 359 505 4.9E-30 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 D172_008290 81e4d24fd0b41c5d9c2dd5c41512cfc1 326 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 16 317 6.3E-104 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 D172_008290 81e4d24fd0b41c5d9c2dd5c41512cfc1 326 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 22 315 2.4E-82 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 D172_008290 81e4d24fd0b41c5d9c2dd5c41512cfc1 326 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 3 318 37.256 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 D172_008290 81e4d24fd0b41c5d9c2dd5c41512cfc1 326 SUPERFAMILY SSF52540 49 178 5.88E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_019300 35cee501382dac646be071bcb53acd7f 85 SUPERFAMILY SSF47336 5 83 2.36E-12 T 14-10-2018 IPR036736 ACP-like superfamily D172_019300 35cee501382dac646be071bcb53acd7f 85 Gene3D G3DSA:1.10.1200.10 3 85 2.1E-20 T 14-10-2018 IPR036736 ACP-like superfamily D172_019300 35cee501382dac646be071bcb53acd7f 85 Pfam PF00550 Phosphopantetheine attachment site 7 80 7.5E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain D172_005275 af80165b3c99a31df3af46ef7d5f2701 287 SUPERFAMILY SSF82861 25 108 6.67E-11 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 D172_005275 af80165b3c99a31df3af46ef7d5f2701 287 SUPERFAMILY SSF50182 109 175 1.9E-18 T 14-10-2018 IPR010920 LSM domain superfamily D172_005275 af80165b3c99a31df3af46ef7d5f2701 287 Pfam PF00924 Mechanosensitive ion channel 68 267 2.5E-46 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 D172_005275 af80165b3c99a31df3af46ef7d5f2701 287 Gene3D G3DSA:3.30.70.100 179 272 3.7E-23 T 14-10-2018 D172_005275 af80165b3c99a31df3af46ef7d5f2701 287 Gene3D G3DSA:2.30.30.60 125 174 4.9E-13 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily D172_005275 af80165b3c99a31df3af46ef7d5f2701 287 SUPERFAMILY SSF82689 179 279 6.02E-25 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 D172_019940 02ea9f47878b1b6b7ae02a557ede6bc1 250 SUPERFAMILY SSF47661 23 137 3.3E-5 T 14-10-2018 IPR010989 SNARE GO:0016020|GO:0016192 D172_019940 02ea9f47878b1b6b7ae02a557ede6bc1 250 PIRSF PIRSF028069 1 250 4.0E-85 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 D172_019940 02ea9f47878b1b6b7ae02a557ede6bc1 250 Pfam PF11932 Protein of unknown function (DUF3450) 8 246 3.0E-92 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 D172_019925 ab0cd3b17931c84be80dae1e68dac09e 417 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 104 406 7.6E-108 T 14-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 D172_019925 ab0cd3b17931c84be80dae1e68dac09e 417 Gene3D G3DSA:1.20.1250.20 225 412 7.1E-61 T 14-10-2018 D172_019925 ab0cd3b17931c84be80dae1e68dac09e 417 SUPERFAMILY SSF103473 17 415 3.53E-41 T 14-10-2018 IPR036259 MFS transporter superfamily D172_019925 ab0cd3b17931c84be80dae1e68dac09e 417 Pfam PF07690 Major Facilitator Superfamily 32 356 1.7E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_019925 ab0cd3b17931c84be80dae1e68dac09e 417 Gene3D G3DSA:1.20.1250.20 18 224 4.8E-61 T 14-10-2018 D172_003445 408b79db618bdd0cca41426d78a0cb4d 322 Pfam PF01699 Sodium/calcium exchanger protein 174 313 1.3E-28 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 D172_003445 408b79db618bdd0cca41426d78a0cb4d 322 Pfam PF01699 Sodium/calcium exchanger protein 4 140 1.1E-25 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 D172_003445 408b79db618bdd0cca41426d78a0cb4d 322 Gene3D G3DSA:1.20.58.1130 8 206 4.0E-83 T 14-10-2018 D172_003445 408b79db618bdd0cca41426d78a0cb4d 322 Gene3D G3DSA:1.20.1420.30 35 310 4.0E-83 T 14-10-2018 D172_003445 408b79db618bdd0cca41426d78a0cb4d 322 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 4 313 1.9E-75 T 14-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 D172_019140 4315d7c7f8f608a8180da54b42acb780 277 Pfam PF00589 Phage integrase family 100 259 8.9E-38 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D172_019140 4315d7c7f8f608a8180da54b42acb780 277 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 4 84 4.5E-11 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 D172_019140 4315d7c7f8f608a8180da54b42acb780 277 Gene3D G3DSA:1.10.443.10 92 265 7.3E-49 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D172_019140 4315d7c7f8f608a8180da54b42acb780 277 Gene3D G3DSA:1.10.150.130 2 90 7.1E-15 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal D172_019140 4315d7c7f8f608a8180da54b42acb780 277 SUPERFAMILY SSF56349 4 262 6.18E-50 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D172_007905 fbcc69bff0f91f176aaea29c9d7eff5c 159 Gene3D G3DSA:3.30.70.920 57 152 5.4E-25 T 14-10-2018 D172_007905 fbcc69bff0f91f176aaea29c9d7eff5c 159 SUPERFAMILY SSF46785 4 64 4.15E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_007905 fbcc69bff0f91f176aaea29c9d7eff5c 159 SMART SM00344 5 114 3.0E-49 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 D172_007905 fbcc69bff0f91f176aaea29c9d7eff5c 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site D172_007905 fbcc69bff0f91f176aaea29c9d7eff5c 159 Pfam PF01037 Lrp/AsnC ligand binding domain 71 145 7.5E-20 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D172_007905 fbcc69bff0f91f176aaea29c9d7eff5c 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 2.7E-20 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_007905 fbcc69bff0f91f176aaea29c9d7eff5c 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 2.7E-20 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_007905 fbcc69bff0f91f176aaea29c9d7eff5c 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 2.7E-20 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_007905 fbcc69bff0f91f176aaea29c9d7eff5c 159 Gene3D G3DSA:1.10.10.10 1 56 1.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_007905 fbcc69bff0f91f176aaea29c9d7eff5c 159 SUPERFAMILY SSF54909 67 148 7.37E-20 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel D172_007905 fbcc69bff0f91f176aaea29c9d7eff5c 159 Pfam PF13404 AsnC-type helix-turn-helix domain 5 46 2.0E-19 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_012840 78c16460abf26a8ef06eb08e52581d0f 459 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 458 3.0E-183 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 D172_012840 78c16460abf26a8ef06eb08e52581d0f 459 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 1.9E-135 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 D172_012840 78c16460abf26a8ef06eb08e52581d0f 459 SMART SM00840 341 402 9.6E-25 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 D172_012840 78c16460abf26a8ef06eb08e52581d0f 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.2E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 D172_012840 78c16460abf26a8ef06eb08e52581d0f 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.2E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 D172_012840 78c16460abf26a8ef06eb08e52581d0f 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 1.2E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 D172_012840 78c16460abf26a8ef06eb08e52581d0f 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 1.2E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 D172_012840 78c16460abf26a8ef06eb08e52581d0f 459 Pfam PF09190 DALR domain 341 402 5.4E-22 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 D172_012840 78c16460abf26a8ef06eb08e52581d0f 459 SUPERFAMILY SSF52374 2 313 1.02E-99 T 14-10-2018 D172_012840 78c16460abf26a8ef06eb08e52581d0f 459 Gene3D G3DSA:3.40.50.620 1 305 4.5E-135 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_012840 78c16460abf26a8ef06eb08e52581d0f 459 Gene3D G3DSA:1.20.120.640 306 458 9.0E-46 T 14-10-2018 D172_012840 78c16460abf26a8ef06eb08e52581d0f 459 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 458 38.599 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 D172_012840 78c16460abf26a8ef06eb08e52581d0f 459 SUPERFAMILY SSF47323 316 458 1.23E-38 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_014740 ed901a6561dda56aaae38e798d86566d 892 Gene3D G3DSA:2.40.170.20 482 890 5.1E-16 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_014740 ed901a6561dda56aaae38e798d86566d 892 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 187 1.1E-4 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_014740 ed901a6561dda56aaae38e798d86566d 892 SUPERFAMILY SSF56935 46 891 1.65E-50 T 14-10-2018 D172_014740 ed901a6561dda56aaae38e798d86566d 892 Gene3D G3DSA:2.170.130.10 46 193 1.6E-5 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_001370 d6fc000fb087606379d6ec39cbf76355 440 SUPERFAMILY SSF53474 78 351 3.06E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_001370 d6fc000fb087606379d6ec39cbf76355 440 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 78 174 2.7E-13 T 14-10-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 D172_019710 646d60a4c44d5ce7eaf24760eb1eca14 595 PIRSF PIRSF016493 16 585 2.0E-186 T 14-10-2018 IPR024191 Peptidase M61 D172_019710 646d60a4c44d5ce7eaf24760eb1eca14 595 SUPERFAMILY SSF55486 203 448 7.32E-9 T 14-10-2018 D172_019710 646d60a4c44d5ce7eaf24760eb1eca14 595 Gene3D G3DSA:2.30.42.10 481 590 3.2E-11 T 14-10-2018 D172_019710 646d60a4c44d5ce7eaf24760eb1eca14 595 Gene3D G3DSA:1.10.390.60 189 453 4.2E-77 T 14-10-2018 D172_019710 646d60a4c44d5ce7eaf24760eb1eca14 595 Gene3D G3DSA:2.60.40.3650 20 187 1.8E-44 T 14-10-2018 D172_019710 646d60a4c44d5ce7eaf24760eb1eca14 595 SUPERFAMILY SSF50156 486 556 4.26E-7 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 D172_019710 646d60a4c44d5ce7eaf24760eb1eca14 595 Pfam PF05299 M61 glycyl aminopeptidase 276 390 4.5E-38 T 14-10-2018 IPR007963 Peptidase M61, catalytic domain D172_015835 47e2cecd0d40fc78c4e6d57f7b1ae5ca 356 Gene3D G3DSA:3.40.50.1970 1 170 8.3E-64 T 14-10-2018 D172_015835 47e2cecd0d40fc78c4e6d57f7b1ae5ca 356 Gene3D G3DSA:1.20.1090.10 171 356 1.6E-69 T 14-10-2018 D172_015835 47e2cecd0d40fc78c4e6d57f7b1ae5ca 356 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 71.004 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 D172_015835 47e2cecd0d40fc78c4e6d57f7b1ae5ca 356 Pfam PF01761 3-dehydroquinate synthase 65 323 8.8E-112 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 D172_015835 47e2cecd0d40fc78c4e6d57f7b1ae5ca 356 PIRSF PIRSF001455 3 356 1.7E-114 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 D172_015835 47e2cecd0d40fc78c4e6d57f7b1ae5ca 356 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 352 1.9E-123 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 D172_015835 47e2cecd0d40fc78c4e6d57f7b1ae5ca 356 SUPERFAMILY SSF56796 4 355 2.88E-118 T 14-10-2018 D172_001060 7da47357125b10f3ecd3ab2141dab0db 92 SUPERFAMILY SSF54570 3 84 1.57E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001060 7da47357125b10f3ecd3ab2141dab0db 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001060 7da47357125b10f3ecd3ab2141dab0db 92 Gene3D G3DSA:3.30.860.10 1 92 1.6E-43 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001060 7da47357125b10f3ecd3ab2141dab0db 92 PIRSF PIRSF002144 1 92 5.5E-32 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001060 7da47357125b10f3ecd3ab2141dab0db 92 Pfam PF00203 Ribosomal protein S19 3 83 2.1E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001060 7da47357125b10f3ecd3ab2141dab0db 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.8E-46 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 D172_001060 7da47357125b10f3ecd3ab2141dab0db 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.9E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001060 7da47357125b10f3ecd3ab2141dab0db 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.9E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001060 7da47357125b10f3ecd3ab2141dab0db 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.9E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001060 7da47357125b10f3ecd3ab2141dab0db 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.779 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_018625 27747320e2b71ce001fca1b8fd21fd9e 225 SUPERFAMILY SSF47616 74 206 3.76E-17 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D172_018625 27747320e2b71ce001fca1b8fd21fd9e 225 Gene3D G3DSA:3.40.30.10 1 79 3.3E-22 T 14-10-2018 D172_018625 27747320e2b71ce001fca1b8fd21fd9e 225 Gene3D G3DSA:1.20.1050.10 80 222 7.6E-48 T 14-10-2018 D172_018625 27747320e2b71ce001fca1b8fd21fd9e 225 SUPERFAMILY SSF52833 1 97 5.04E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_018625 27747320e2b71ce001fca1b8fd21fd9e 225 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 1.1E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D172_018625 27747320e2b71ce001fca1b8fd21fd9e 225 Pfam PF00043 Glutathione S-transferase, C-terminal domain 116 193 7.1E-5 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal D172_004960 65fc8966769dacf4ef9f192f534fe7f9 208 Pfam PF00510 Cytochrome c oxidase subunit III 29 206 3.9E-13 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004960 65fc8966769dacf4ef9f192f534fe7f9 208 Gene3D G3DSA:1.20.120.80 23 208 1.0E-54 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004960 65fc8966769dacf4ef9f192f534fe7f9 208 SUPERFAMILY SSF81452 10 206 3.14E-56 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_004960 65fc8966769dacf4ef9f192f534fe7f9 208 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 29 208 2.6E-83 T 14-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 D172_001315 8be3858ef62e084f835137d3599ffa97 323 SUPERFAMILY SSF74650 5 323 1.63E-102 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 D172_001315 8be3858ef62e084f835137d3599ffa97 323 Pfam PF01263 Aldose 1-epimerase 12 320 1.1E-79 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 D172_001315 8be3858ef62e084f835137d3599ffa97 323 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 160 169 - T 14-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 D172_001315 8be3858ef62e084f835137d3599ffa97 323 Gene3D G3DSA:2.70.98.10 3 323 6.1E-110 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 D172_001315 8be3858ef62e084f835137d3599ffa97 323 PIRSF PIRSF005096 1 323 1.9E-103 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 D172_021085 1ffe5a4afe8f8d2de10de9a8d630966f 325 PIRSF PIRSF018266 1 324 4.5E-57 T 14-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component D172_021085 1ffe5a4afe8f8d2de10de9a8d630966f 325 Gene3D G3DSA:2.60.120.1440 109 247 2.2E-29 T 14-10-2018 D172_021085 1ffe5a4afe8f8d2de10de9a8d630966f 325 Pfam PF16344 Domain of unknown function (DUF4974) 224 318 1.6E-8 T 14-10-2018 IPR032508 Protein FecR, C-terminal D172_021085 1ffe5a4afe8f8d2de10de9a8d630966f 325 Pfam PF04773 FecR protein 126 215 5.7E-22 T 14-10-2018 IPR006860 FecR protein D172_021085 1ffe5a4afe8f8d2de10de9a8d630966f 325 Gene3D G3DSA:3.55.50.30 255 324 2.7E-5 T 14-10-2018 D172_009205 c8ffa8bbdf047ae823a2a03253219824 226 Gene3D G3DSA:1.10.150.240 28 95 1.4E-48 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D172_009205 c8ffa8bbdf047ae823a2a03253219824 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 96 193 7.5E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_009205 c8ffa8bbdf047ae823a2a03253219824 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 17 194 1.6E-31 T 14-10-2018 D172_009205 c8ffa8bbdf047ae823a2a03253219824 226 SUPERFAMILY SSF56784 13 200 2.67E-43 T 14-10-2018 IPR036412 HAD-like superfamily D172_009205 c8ffa8bbdf047ae823a2a03253219824 226 Gene3D G3DSA:3.40.50.1000 16 202 1.4E-48 T 14-10-2018 IPR023214 HAD superfamily D172_009205 c8ffa8bbdf047ae823a2a03253219824 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 101 190 3.8E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_001830 ce37909b9778d9ae35419f11510d14ca 323 Pfam PF00498 FHA domain 20 84 1.8E-14 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 D172_001830 ce37909b9778d9ae35419f11510d14ca 323 Gene3D G3DSA:2.60.200.20 3 99 2.0E-17 T 14-10-2018 D172_001830 ce37909b9778d9ae35419f11510d14ca 323 SUPERFAMILY SSF49879 19 92 4.21E-17 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 D172_001830 ce37909b9778d9ae35419f11510d14ca 323 SMART SM00240 18 68 3.7E-6 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 D172_017300 b9ef5386bc758c80614d7ddf07f5ec8c 210 Gene3D G3DSA:3.40.50.720 1 209 1.8E-42 T 14-10-2018 D172_017300 b9ef5386bc758c80614d7ddf07f5ec8c 210 SUPERFAMILY SSF51735 1 208 6.68E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_017300 b9ef5386bc758c80614d7ddf07f5ec8c 210 Pfam PF13460 NAD(P)H-binding 7 195 2.4E-24 T 14-10-2018 IPR016040 NAD(P)-binding domain D172_013850 84363922696144700f4029fb7e6fe083 305 SUPERFAMILY SSF52540 5 260 3.65E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_013850 84363922696144700f4029fb7e6fe083 305 SMART SM00382 42 196 6.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_013850 84363922696144700f4029fb7e6fe083 305 Pfam PF13401 AAA domain 42 172 3.8E-22 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_013850 84363922696144700f4029fb7e6fe083 305 Gene3D G3DSA:3.40.50.300 26 186 1.9E-18 T 14-10-2018 D172_005180 0fb03987592969161edb8ca1de179d14 202 Pfam PF01613 Flavin reductase like domain 22 165 6.5E-17 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 D172_005180 0fb03987592969161edb8ca1de179d14 202 Gene3D G3DSA:2.30.110.10 2 202 1.9E-59 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 D172_005180 0fb03987592969161edb8ca1de179d14 202 SUPERFAMILY SSF50475 5 193 7.36E-40 T 14-10-2018 D172_005180 0fb03987592969161edb8ca1de179d14 202 SMART SM00903 19 173 1.7E-11 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 D172_008860 15d76998ef92fbe1ff94c359e7e79e14 330 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 6 327 4.2E-134 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI D172_008860 15d76998ef92fbe1ff94c359e7e79e14 330 SMART SM00829 19 326 3.9E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D172_008860 15d76998ef92fbe1ff94c359e7e79e14 330 Gene3D G3DSA:3.40.50.720 129 296 6.3E-117 T 14-10-2018 D172_008860 15d76998ef92fbe1ff94c359e7e79e14 330 SUPERFAMILY SSF51735 119 295 5.09E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_008860 15d76998ef92fbe1ff94c359e7e79e14 330 Pfam PF00107 Zinc-binding dehydrogenase 162 273 2.4E-17 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D172_008860 15d76998ef92fbe1ff94c359e7e79e14 330 Gene3D G3DSA:3.90.180.10 20 326 6.3E-117 T 14-10-2018 D172_008860 15d76998ef92fbe1ff94c359e7e79e14 330 SUPERFAMILY SSF50129 6 149 1.42E-39 T 14-10-2018 IPR011032 GroES-like superfamily D172_015710 d52daaf8012695ceb5a4ea7bd12fa147 278 SUPERFAMILY SSF50182 90 161 1.83E-12 T 14-10-2018 IPR010920 LSM domain superfamily D172_015710 d52daaf8012695ceb5a4ea7bd12fa147 278 Pfam PF00924 Mechanosensitive ion channel 52 165 6.0E-17 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 D172_015710 d52daaf8012695ceb5a4ea7bd12fa147 278 Gene3D G3DSA:2.30.30.60 105 161 3.5E-9 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily D172_006990 dd7da9cc7822705b568402c1e26ea523 70 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 70 20.402 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 D172_006990 dd7da9cc7822705b568402c1e26ea523 70 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 2.0E-33 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 D172_006990 dd7da9cc7822705b568402c1e26ea523 70 Gene3D G3DSA:1.10.3390.10 1 70 3.9E-32 T 14-10-2018 IPR023202 YejL-like superfamily D172_006990 dd7da9cc7822705b568402c1e26ea523 70 SUPERFAMILY SSF158651 1 70 1.02E-27 T 14-10-2018 IPR023202 YejL-like superfamily D172_006990 dd7da9cc7822705b568402c1e26ea523 70 PIRSF PIRSF006188 1 70 1.9E-29 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 D172_006990 dd7da9cc7822705b568402c1e26ea523 70 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 1.2E-22 T 14-10-2018 IPR009857 Uncharacterised protein family UPF0352 D172_003410 491791e1d2c339ed966883b5bd02eddd 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 1.5E-33 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 D172_003410 491791e1d2c339ed966883b5bd02eddd 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 2.7E-28 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 D172_003410 491791e1d2c339ed966883b5bd02eddd 95 SUPERFAMILY SSF69754 1 95 5.1E-35 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like D172_003410 491791e1d2c339ed966883b5bd02eddd 95 Gene3D G3DSA:3.30.160.100 1 95 3.0E-36 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like D172_014055 70a4d26f0bc7fba83b17ca09fb2379a5 140 Pfam PF11026 Protein of unknown function (DUF2721) 4 120 3.6E-33 T 14-10-2018 IPR021279 Protein of unknown function DUF2721 D172_019330 1aacfcfb02139ebf7146193a4f9d3212 322 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 98 306 6.2E-10 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 D172_019330 1aacfcfb02139ebf7146193a4f9d3212 322 PIRSF PIRSF028561 1 321 4.7E-84 T 14-10-2018 IPR014548 Predicted acyltransferase D172_002615 9d194fc0932e7ba581b508c7b9a12696 299 Gene3D G3DSA:3.30.70.270 125 298 7.3E-59 T 14-10-2018 D172_002615 9d194fc0932e7ba581b508c7b9a12696 299 SMART SM00448 5 117 8.6E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_002615 9d194fc0932e7ba581b508c7b9a12696 299 Pfam PF00072 Response regulator receiver domain 7 114 2.6E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_002615 9d194fc0932e7ba581b508c7b9a12696 299 SUPERFAMILY SSF55073 139 297 3.4E-47 T 14-10-2018 IPR029787 Nucleotide cyclase D172_002615 9d194fc0932e7ba581b508c7b9a12696 299 Pfam PF00990 Diguanylate cyclase, GGDEF domain 134 295 7.3E-50 T 14-10-2018 IPR000160 GGDEF domain D172_002615 9d194fc0932e7ba581b508c7b9a12696 299 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 130 297 2.1E-52 T 14-10-2018 IPR000160 GGDEF domain D172_002615 9d194fc0932e7ba581b508c7b9a12696 299 Gene3D G3DSA:3.40.50.2300 1 124 5.7E-35 T 14-10-2018 D172_002615 9d194fc0932e7ba581b508c7b9a12696 299 SUPERFAMILY SSF52172 4 125 1.12E-36 T 14-10-2018 IPR011006 CheY-like superfamily D172_002615 9d194fc0932e7ba581b508c7b9a12696 299 SMART SM00267 123 299 4.5E-62 T 14-10-2018 IPR000160 GGDEF domain D172_007035 d2cc8ebcd18015878e1665769003d88c 308 Gene3D G3DSA:3.30.70.250 126 198 4.5E-96 T 14-10-2018 D172_007035 d2cc8ebcd18015878e1665769003d88c 308 PIRSF PIRSF000446 2 308 5.8E-119 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 D172_007035 d2cc8ebcd18015878e1665769003d88c 308 SUPERFAMILY SSF52151 5 306 7.32E-74 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D172_007035 d2cc8ebcd18015878e1665769003d88c 308 Pfam PF00698 Acyl transferase domain 8 267 1.3E-36 T 14-10-2018 IPR014043 Acyl transferase D172_007035 d2cc8ebcd18015878e1665769003d88c 308 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 4 291 1.3E-111 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 D172_007035 d2cc8ebcd18015878e1665769003d88c 308 SUPERFAMILY SSF55048 131 198 3.27E-17 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding D172_007035 d2cc8ebcd18015878e1665769003d88c 308 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 302 5.3E-25 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain D172_007035 d2cc8ebcd18015878e1665769003d88c 308 Gene3D G3DSA:3.40.366.10 8 287 4.5E-96 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 D172_003820 4161b6f4229788f0273535acc1ae4db8 80 SUPERFAMILY SSF53182 19 76 1.44E-10 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 D172_007215 b3a3f58f35a11b2ccdf27765b8b1819c 220 SUPERFAMILY SSF50800 1 213 1.83E-60 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily D172_007215 b3a3f58f35a11b2ccdf27765b8b1819c 220 Gene3D G3DSA:2.40.33.20 1 220 2.1E-63 T 14-10-2018 D172_007215 b3a3f58f35a11b2ccdf27765b8b1819c 220 Pfam PF03475 3-alpha domain 170 213 2.8E-6 T 14-10-2018 IPR005163 3-alpha domain D172_007215 b3a3f58f35a11b2ccdf27765b8b1819c 220 Pfam PF03473 MOSC domain 50 161 2.0E-19 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 D172_009145 58c34f96db8906c8f3890d6a0b4bcd71 276 PIRSF PIRSF012524 1 276 1.7E-74 T 14-10-2018 IPR014464 Conserved virulence factor B D172_009145 58c34f96db8906c8f3890d6a0b4bcd71 276 Gene3D G3DSA:1.10.10.10 215 275 8.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_009145 58c34f96db8906c8f3890d6a0b4bcd71 276 Pfam PF13509 S1 domain 70 126 1.1E-4 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain D172_009145 58c34f96db8906c8f3890d6a0b4bcd71 276 Pfam PF13509 S1 domain 4 64 2.8E-17 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain D172_007700 6e69d5ac0209c973a69a34b3e4c5bf22 843 Gene3D G3DSA:2.40.170.20 179 843 1.0E-75 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_007700 6e69d5ac0209c973a69a34b3e4c5bf22 843 Gene3D G3DSA:2.170.130.10 30 170 7.2E-25 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_007700 6e69d5ac0209c973a69a34b3e4c5bf22 843 Pfam PF00593 TonB dependent receptor 297 842 7.5E-30 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_007700 6e69d5ac0209c973a69a34b3e4c5bf22 843 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 161 2.3E-11 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_007700 6e69d5ac0209c973a69a34b3e4c5bf22 843 SUPERFAMILY SSF56935 37 843 6.51E-98 T 14-10-2018 D172_014300 f6978f7354293b806b07fb14d5602756 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 46 3.0E-17 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 D172_014300 f6978f7354293b806b07fb14d5602756 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 14.572 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 D172_014300 f6978f7354293b806b07fb14d5602756 80 PIRSF PIRSF006488 1 79 1.4E-23 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 D172_014300 f6978f7354293b806b07fb14d5602756 80 SUPERFAMILY SSF116842 2 74 1.06E-21 T 14-10-2018 D172_014300 f6978f7354293b806b07fb14d5602756 80 Gene3D G3DSA:1.10.287.1040 4 79 1.6E-22 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 D172_014300 f6978f7354293b806b07fb14d5602756 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 4.6E-22 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 D172_014300 f6978f7354293b806b07fb14d5602756 80 Pfam PF02609 Exonuclease VII small subunit 11 61 1.1E-18 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 D172_009995 714f3c2ac2d7e7a41b830098d77aa094 454 SMART SM00028 199 232 3.9E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_009995 714f3c2ac2d7e7a41b830098d77aa094 454 Gene3D G3DSA:1.25.40.10 28 282 5.5E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_009995 714f3c2ac2d7e7a41b830098d77aa094 454 SUPERFAMILY SSF48452 129 247 2.44E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_020875 8b090209c51acbee71e8006c2baec970 846 Pfam PF00593 TonB dependent receptor 279 845 1.8E-33 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_020875 8b090209c51acbee71e8006c2baec970 846 Gene3D G3DSA:2.40.170.20 256 846 5.3E-51 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_020875 8b090209c51acbee71e8006c2baec970 846 Gene3D G3DSA:2.170.130.10 32 176 1.2E-29 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_020875 8b090209c51acbee71e8006c2baec970 846 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 172 1.2E-19 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_020875 8b090209c51acbee71e8006c2baec970 846 SUPERFAMILY SSF56935 37 846 7.33E-95 T 14-10-2018 D172_004270 99538e423dfe5240f7b21d5a4a38c100 419 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 155 210 2.4E-8 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 D172_004270 99538e423dfe5240f7b21d5a4a38c100 419 Pfam PF01966 HD domain 229 305 5.2E-7 T 14-10-2018 IPR006674 HD domain D172_004270 99538e423dfe5240f7b21d5a4a38c100 419 SUPERFAMILY SSF81891 125 411 4.97E-39 T 14-10-2018 D172_004270 99538e423dfe5240f7b21d5a4a38c100 419 SUPERFAMILY SSF81301 7 124 1.96E-29 T 14-10-2018 D172_004270 99538e423dfe5240f7b21d5a4a38c100 419 Gene3D G3DSA:1.10.3090.10 127 416 2.4E-35 T 14-10-2018 D172_004270 99538e423dfe5240f7b21d5a4a38c100 419 PIRSF PIRSF000813 6 413 8.1E-145 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 D172_004270 99538e423dfe5240f7b21d5a4a38c100 419 Gene3D G3DSA:3.30.460.10 1 126 4.5E-30 T 14-10-2018 D172_004270 99538e423dfe5240f7b21d5a4a38c100 419 Pfam PF01743 Poly A polymerase head domain 8 127 5.9E-19 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 D172_006525 d6b8bf57c001f4cff2da1de117c145ae 955 Gene3D G3DSA:3.30.65.10 906 955 5.0E-5 T 14-10-2018 D172_006525 d6b8bf57c001f4cff2da1de117c145ae 955 Gene3D G3DSA:3.40.50.300 648 838 2.1E-24 T 14-10-2018 D172_006525 d6b8bf57c001f4cff2da1de117c145ae 955 Pfam PF13361 UvrD-like helicase C-terminal domain 675 817 2.8E-12 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 D172_006525 d6b8bf57c001f4cff2da1de117c145ae 955 SUPERFAMILY SSF57783 911 940 5.61E-6 T 14-10-2018 D172_006525 d6b8bf57c001f4cff2da1de117c145ae 955 SUPERFAMILY SSF52540 190 833 1.09E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006525 d6b8bf57c001f4cff2da1de117c145ae 955 Gene3D G3DSA:3.40.50.300 182 333 5.2E-22 T 14-10-2018 D172_006525 d6b8bf57c001f4cff2da1de117c145ae 955 Pfam PF00580 UvrD/REP helicase N-terminal domain 191 635 4.1E-38 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 D172_006525 d6b8bf57c001f4cff2da1de117c145ae 955 Gene3D G3DSA:3.40.50.300 431 641 4.3E-25 T 14-10-2018 D172_006525 d6b8bf57c001f4cff2da1de117c145ae 955 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 915 939 7.0E-7 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 D172_006525 d6b8bf57c001f4cff2da1de117c145ae 955 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 851 877 0.0036 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 D172_013520 0f48fd07845dd4d6caa798e6ddd822ed 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site D172_013520 0f48fd07845dd4d6caa798e6ddd822ed 262 SUPERFAMILY SSF117143 92 223 8.11E-33 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like D172_013520 0f48fd07845dd4d6caa798e6ddd822ed 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 1.6E-41 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G D172_013520 0f48fd07845dd4d6caa798e6ddd822ed 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 2.4E-30 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G D172_013520 0f48fd07845dd4d6caa798e6ddd822ed 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 1.6E-110 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 D172_013520 0f48fd07845dd4d6caa798e6ddd822ed 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 1.3E-24 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D172_013520 0f48fd07845dd4d6caa798e6ddd822ed 262 Pfam PF00460 Flagella basal body rod protein 5 35 2.3E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 D172_008090 0bf1e9b8795c1c9e7f6acfb975dab5c2 152 Gene3D G3DSA:3.40.630.30 3 142 1.0E-22 T 14-10-2018 D172_008090 0bf1e9b8795c1c9e7f6acfb975dab5c2 152 Pfam PF13673 Acetyltransferase (GNAT) domain 25 139 2.9E-10 T 14-10-2018 IPR000182 GNAT domain D172_008090 0bf1e9b8795c1c9e7f6acfb975dab5c2 152 SUPERFAMILY SSF55729 14 142 1.8E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_005015 d95202e834f081fb93b18651e6a86a2d 167 ProSitePatterns PS00194 Thioredoxin family active site. 55 73 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 D172_005015 d95202e834f081fb93b18651e6a86a2d 167 Pfam PF08534 Redoxin 30 147 3.4E-13 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 D172_005015 d95202e834f081fb93b18651e6a86a2d 167 SUPERFAMILY SSF52833 30 163 1.92E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_005015 d95202e834f081fb93b18651e6a86a2d 167 Gene3D G3DSA:3.40.30.10 14 159 6.2E-27 T 14-10-2018 D172_014210 00cc8a68e38ec70a51245a430dfec4a7 65 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 22 65 3.0E-18 T 14-10-2018 D172_014210 00cc8a68e38ec70a51245a430dfec4a7 65 Pfam PF13617 YnbE-like lipoprotein 10 62 3.2E-25 T 14-10-2018 IPR025985 YnbE-like lipoprotein D172_015245 5699d2a839ac84888ccb1b04789bfb64 651 Pfam PF02719 Polysaccharide biosynthesis protein 284 580 5.7E-130 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain D172_015245 5699d2a839ac84888ccb1b04789bfb64 651 SUPERFAMILY SSF51735 281 542 5.55E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_015245 5699d2a839ac84888ccb1b04789bfb64 651 Gene3D G3DSA:3.40.50.720 141 265 1.2E-28 T 14-10-2018 D172_015245 5699d2a839ac84888ccb1b04789bfb64 651 Gene3D G3DSA:3.40.50.720 279 610 1.3E-114 T 14-10-2018 D172_015245 5699d2a839ac84888ccb1b04789bfb64 651 SUPERFAMILY SSF51735 143 271 1.85E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_015245 5699d2a839ac84888ccb1b04789bfb64 651 Pfam PF13727 CoA-binding domain 69 239 1.4E-12 T 14-10-2018 D172_013110 316443b09857034b31c3a717a93a40d4 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 67 1.7E-28 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor D172_013110 316443b09857034b31c3a717a93a40d4 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 70 3.0E-19 T 14-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor D172_015530 6a85063c5ad5b907b2fc9d3e8a10c9c7 670 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 43 56 - T 14-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 D172_015530 6a85063c5ad5b907b2fc9d3e8a10c9c7 670 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 513 661 6.0E-23 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal D172_015530 6a85063c5ad5b907b2fc9d3e8a10c9c7 670 Gene3D G3DSA:2.115.10.20 355 518 1.7E-22 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily D172_015530 6a85063c5ad5b907b2fc9d3e8a10c9c7 670 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 43 287 2.1E-75 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal D172_015530 6a85063c5ad5b907b2fc9d3e8a10c9c7 670 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 431 510 1.0E-16 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal D172_015530 6a85063c5ad5b907b2fc9d3e8a10c9c7 670 SUPERFAMILY SSF75005 35 511 1.19E-100 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily D172_015530 6a85063c5ad5b907b2fc9d3e8a10c9c7 670 Gene3D G3DSA:2.60.120.560 519 669 1.1E-25 T 14-10-2018 D172_015530 6a85063c5ad5b907b2fc9d3e8a10c9c7 670 Gene3D G3DSA:2.115.10.20 35 353 8.1E-99 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily D172_015530 6a85063c5ad5b907b2fc9d3e8a10c9c7 670 SMART SM00640 43 631 1.4E-141 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 D172_015530 6a85063c5ad5b907b2fc9d3e8a10c9c7 670 SUPERFAMILY SSF49899 510 655 1.66E-20 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D172_007910 ad768cd6a2b423545186b9dccd1212c6 833 Gene3D G3DSA:3.30.980.40 339 443 3.6E-35 T 14-10-2018 D172_007910 ad768cd6a2b423545186b9dccd1212c6 833 Gene3D G3DSA:3.40.50.300 444 746 4.8E-118 T 14-10-2018 D172_007910 ad768cd6a2b423545186b9dccd1212c6 833 Pfam PF09397 Ftsk gamma domain 766 827 8.7E-27 T 14-10-2018 IPR018541 FtsK gamma domain D172_007910 ad768cd6a2b423545186b9dccd1212c6 833 SUPERFAMILY SSF46785 765 829 1.18E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_007910 ad768cd6a2b423545186b9dccd1212c6 833 Gene3D G3DSA:1.10.10.10 759 826 4.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_007910 ad768cd6a2b423545186b9dccd1212c6 833 SMART SM00843 765 830 4.6E-40 T 14-10-2018 IPR018541 FtsK gamma domain D172_007910 ad768cd6a2b423545186b9dccd1212c6 833 Pfam PF01580 FtsK/SpoIIIE family 447 660 1.6E-66 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 D172_007910 ad768cd6a2b423545186b9dccd1212c6 833 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 8 177 1.0E-36 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region D172_007910 ad768cd6a2b423545186b9dccd1212c6 833 SUPERFAMILY SSF52540 421 733 8.64E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_009390 0d10c7ebafb4397525457ae3694c33ac 923 SUPERFAMILY SSF56935 25 922 5.95E-89 T 14-10-2018 D172_009390 0d10c7ebafb4397525457ae3694c33ac 923 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 37 922 1.8E-187 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_009390 0d10c7ebafb4397525457ae3694c33ac 923 Pfam PF00593 TonB dependent receptor 337 920 2.0E-28 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_009390 0d10c7ebafb4397525457ae3694c33ac 923 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 162 2.4E-16 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_009390 0d10c7ebafb4397525457ae3694c33ac 923 Gene3D G3DSA:2.170.130.10 38 168 1.9E-17 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_007885 0d174adef965c654770262b24813b7f3 238 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 39 207 2.4E-70 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 D172_007885 0d174adef965c654770262b24813b7f3 238 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 42 221 1.3E-63 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 D172_007885 0d174adef965c654770262b24813b7f3 238 Gene3D G3DSA:3.40.630.70 64 237 8.8E-62 T 14-10-2018 D172_007885 0d174adef965c654770262b24813b7f3 238 SUPERFAMILY SSF55729 5 231 2.05E-88 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_007885 0d174adef965c654770262b24813b7f3 238 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 238 85.623 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 D172_007885 0d174adef965c654770262b24813b7f3 238 Gene3D G3DSA:2.30.210.20 4 63 1.9E-27 T 14-10-2018 D172_014330 1b4f95a171e03803f4a93d7ed4420941 136 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 133 3.1E-44 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 D172_014330 1b4f95a171e03803f4a93d7ed4420941 136 Gene3D G3DSA:1.10.940.10 1 136 3.9E-49 T 14-10-2018 IPR035926 NusB-like superfamily D172_014330 1b4f95a171e03803f4a93d7ed4420941 136 SUPERFAMILY SSF48013 3 135 2.62E-42 T 14-10-2018 IPR035926 NusB-like superfamily D172_014330 1b4f95a171e03803f4a93d7ed4420941 136 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 4 135 23.632 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 D172_014330 1b4f95a171e03803f4a93d7ed4420941 136 Pfam PF01029 NusB family 7 132 1.9E-35 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 D172_015475 c7b3b87c050ec13a60a6cffb016d5c7e 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 D172_015475 c7b3b87c050ec13a60a6cffb016d5c7e 475 Gene3D G3DSA:3.40.605.10 19 466 5.7E-164 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D172_015475 c7b3b87c050ec13a60a6cffb016d5c7e 475 SUPERFAMILY SSF53720 7 474 1.01E-150 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D172_015475 c7b3b87c050ec13a60a6cffb016d5c7e 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 D172_015475 c7b3b87c050ec13a60a6cffb016d5c7e 475 Gene3D G3DSA:3.40.309.10 256 443 5.7E-164 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D172_015475 c7b3b87c050ec13a60a6cffb016d5c7e 475 Pfam PF00171 Aldehyde dehydrogenase family 19 471 5.8E-153 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D172_013135 2bae8c5b0649f559de273d2dc9798556 328 SMART SM00267 148 325 4.2E-30 T 14-10-2018 IPR000160 GGDEF domain D172_013135 2bae8c5b0649f559de273d2dc9798556 328 SUPERFAMILY SSF55073 164 324 4.55E-34 T 14-10-2018 IPR029787 Nucleotide cyclase D172_013135 2bae8c5b0649f559de273d2dc9798556 328 Pfam PF00990 Diguanylate cyclase, GGDEF domain 159 321 1.5E-33 T 14-10-2018 IPR000160 GGDEF domain D172_013135 2bae8c5b0649f559de273d2dc9798556 328 Gene3D G3DSA:3.30.70.270 144 325 1.9E-40 T 14-10-2018 D172_013135 2bae8c5b0649f559de273d2dc9798556 328 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 157 324 5.7E-36 T 14-10-2018 IPR000160 GGDEF domain D172_015690 7d1774b4643f6149b1652702e3ec5b23 661 Gene3D G3DSA:3.40.50.300 380 579 9.7E-43 T 14-10-2018 D172_015690 7d1774b4643f6149b1652702e3ec5b23 661 SUPERFAMILY SSF52540 394 630 1.23E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_015690 7d1774b4643f6149b1652702e3ec5b23 661 SMART SM00382 431 563 5.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_015690 7d1774b4643f6149b1652702e3ec5b23 661 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 436 560 1.4E-26 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 D172_014495 0e1161da205253a1f4d3b0b80a3d4e4c 574 Pfam PF00474 Sodium:solute symporter family 381 496 1.4E-16 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D172_014495 0e1161da205253a1f4d3b0b80a3d4e4c 574 Pfam PF00474 Sodium:solute symporter family 33 303 1.2E-32 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D172_014495 0e1161da205253a1f4d3b0b80a3d4e4c 574 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 565 4.5E-261 T 14-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily D172_014495 0e1161da205253a1f4d3b0b80a3d4e4c 574 Gene3D G3DSA:1.20.1730.10 21 329 5.2E-35 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily D172_014495 0e1161da205253a1f4d3b0b80a3d4e4c 574 Gene3D G3DSA:1.20.1730.10 334 564 2.5E-27 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily D172_007075 769188604684046db268256d45213874 108 Gene3D G3DSA:2.40.10.220 2 108 9.2E-36 T 14-10-2018 D172_007075 769188604684046db268256d45213874 108 Pfam PF07238 PilZ domain 6 93 2.0E-7 T 14-10-2018 IPR009875 PilZ domain GO:0035438 D172_005695 5dc8426e48781d789dd7429abd6f100a 321 Pfam PF14240 YHYH protein 181 280 2.0E-12 T 14-10-2018 IPR025924 YHYH domain D172_001970 f8d0ffde86a501afc14e115d610d3695 225 Gene3D G3DSA:1.20.58.220 1 225 6.3E-61 T 14-10-2018 IPR038078 PhoU-like domain superfamily D172_001970 f8d0ffde86a501afc14e115d610d3695 225 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 7 225 9.2E-62 T 14-10-2018 IPR002727 Protein of unknown function DUF47 D172_001970 f8d0ffde86a501afc14e115d610d3695 225 Pfam PF01865 Protein of unknown function DUF47 7 224 1.7E-61 T 14-10-2018 IPR018445 Putative phosphate transport regulator D172_001970 f8d0ffde86a501afc14e115d610d3695 225 SUPERFAMILY SSF109755 48 215 7.43E-16 T 14-10-2018 D172_019085 dcdf37e41ef239147d7708450fec6c5d 162 SUPERFAMILY SSF47741 72 149 7.07E-30 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily D172_019085 dcdf37e41ef239147d7708450fec6c5d 162 Pfam PF01799 [2Fe-2S] binding domain 72 141 9.3E-26 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 D172_019085 dcdf37e41ef239147d7708450fec6c5d 162 SUPERFAMILY SSF54292 2 78 5.24E-25 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D172_019085 dcdf37e41ef239147d7708450fec6c5d 162 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 D172_019085 dcdf37e41ef239147d7708450fec6c5d 162 Gene3D G3DSA:1.10.150.120 76 154 2.2E-24 T 14-10-2018 D172_019085 dcdf37e41ef239147d7708450fec6c5d 162 Gene3D G3DSA:3.10.20.30 1 75 5.2E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily D172_019085 dcdf37e41ef239147d7708450fec6c5d 162 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 53 1.6E-5 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 D172_019890 68f4f9b51124182108d87397c018220a 336 Gene3D G3DSA:3.40.50.720 148 285 1.4E-133 T 14-10-2018 D172_019890 68f4f9b51124182108d87397c018220a 336 SUPERFAMILY SSF50129 1 158 4.41E-55 T 14-10-2018 IPR011032 GroES-like superfamily D172_019890 68f4f9b51124182108d87397c018220a 336 Pfam PF00107 Zinc-binding dehydrogenase 175 300 5.0E-30 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D172_019890 68f4f9b51124182108d87397c018220a 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 2.5E-34 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D172_019890 68f4f9b51124182108d87397c018220a 336 Gene3D G3DSA:3.90.180.10 13 332 1.4E-133 T 14-10-2018 D172_019890 68f4f9b51124182108d87397c018220a 336 SUPERFAMILY SSF51735 139 305 1.31E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_019890 68f4f9b51124182108d87397c018220a 336 SMART SM00829 11 334 1.0E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D172_019890 68f4f9b51124182108d87397c018220a 336 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 D172_014320 5eec869ea54d7801ee001476ab25cce0 161 SUPERFAMILY SSF101307 7 153 2.22E-43 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 D172_014320 5eec869ea54d7801ee001476ab25cce0 161 PIRSF PIRSF006162 3 160 1.8E-48 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 D172_014320 5eec869ea54d7801ee001476ab25cce0 161 Pfam PF04608 Phosphatidylglycerophosphatase A 14 153 6.1E-48 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 D172_016455 dc6bb53eec42332783ad3659c8f3b6e4 239 Gene3D G3DSA:3.40.50.2300 1 127 1.5E-39 T 14-10-2018 D172_016455 dc6bb53eec42332783ad3659c8f3b6e4 239 SMART SM00862 157 233 7.8E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_016455 dc6bb53eec42332783ad3659c8f3b6e4 239 SUPERFAMILY SSF46894 134 235 1.3E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_016455 dc6bb53eec42332783ad3659c8f3b6e4 239 Pfam PF00072 Response regulator receiver domain 8 118 1.6E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_016455 dc6bb53eec42332783ad3659c8f3b6e4 239 SUPERFAMILY SSF52172 4 127 4.13E-41 T 14-10-2018 IPR011006 CheY-like superfamily D172_016455 dc6bb53eec42332783ad3659c8f3b6e4 239 Gene3D G3DSA:1.10.10.10 131 239 1.9E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_016455 dc6bb53eec42332783ad3659c8f3b6e4 239 SMART SM00448 6 117 6.3E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_016455 dc6bb53eec42332783ad3659c8f3b6e4 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 2.2E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_002010 1656cbde2899ff024857f2faee80c755 619 Pfam PF02355 Protein export membrane protein 437 598 3.0E-18 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial D172_002010 1656cbde2899ff024857f2faee80c755 619 Pfam PF07549 SecD/SecF GG Motif 116 140 5.4E-6 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site D172_002010 1656cbde2899ff024857f2faee80c755 619 Gene3D G3DSA:3.30.70.3400 221 441 2.1E-47 T 14-10-2018 D172_002010 1656cbde2899ff024857f2faee80c755 619 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 2.8E-6 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_002010 1656cbde2899ff024857f2faee80c755 619 PRINTS PR00702 Acriflavin resistance protein family signature 507 531 2.8E-6 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_002010 1656cbde2899ff024857f2faee80c755 619 PRINTS PR00702 Acriflavin resistance protein family signature 582 605 2.8E-6 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 D172_002010 1656cbde2899ff024857f2faee80c755 619 SUPERFAMILY SSF82866 414 610 1.96E-44 T 14-10-2018 D172_002010 1656cbde2899ff024857f2faee80c755 619 Gene3D G3DSA:3.30.1360.200 281 435 2.1E-47 T 14-10-2018 D172_002010 1656cbde2899ff024857f2faee80c755 619 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 598 4.3E-79 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial D172_002010 1656cbde2899ff024857f2faee80c755 619 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 619 47.354 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 D172_002010 1656cbde2899ff024857f2faee80c755 619 Pfam PF13721 SecD export protein N-terminal TM region 2 102 7.9E-34 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain D172_002010 1656cbde2899ff024857f2faee80c755 619 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 604 7.9E-146 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 D172_001700 969671f86745079c2db1bfcac854011f 152 Gene3D G3DSA:2.40.50.100 74 152 3.1E-29 T 14-10-2018 D172_001700 969671f86745079c2db1bfcac854011f 152 Pfam PF00364 Biotin-requiring enzyme 77 151 6.4E-24 T 14-10-2018 IPR000089 Biotin/lipoyl attachment D172_001700 969671f86745079c2db1bfcac854011f 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 113 126 1.8E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 D172_001700 969671f86745079c2db1bfcac854011f 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 81 94 1.8E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 D172_001700 969671f86745079c2db1bfcac854011f 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 98 112 1.8E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 D172_001700 969671f86745079c2db1bfcac854011f 152 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 108 125 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 D172_001700 969671f86745079c2db1bfcac854011f 152 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 152 6.1E-56 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 D172_001700 969671f86745079c2db1bfcac854011f 152 SUPERFAMILY SSF51230 77 152 5.37E-24 T 14-10-2018 IPR011053 Single hybrid motif D172_002035 59471d27d279b6afb66f0e35e9c3ab05 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 8.8E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D172_002035 59471d27d279b6afb66f0e35e9c3ab05 138 Gene3D G3DSA:3.10.180.10 2 134 3.3E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_002035 59471d27d279b6afb66f0e35e9c3ab05 138 SUPERFAMILY SSF54593 2 131 6.71E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_007000 818a5283a1639b4ac8836fbca5906399 1097 Pfam PF10150 Ribonuclease E/G family 121 390 2.9E-95 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 D172_007000 818a5283a1639b4ac8836fbca5906399 1097 SUPERFAMILY SSF50249 40 123 1.72E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_007000 818a5283a1639b4ac8836fbca5906399 1097 SMART SM00316 37 119 4.2E-11 T 14-10-2018 IPR022967 RNA-binding domain, S1 D172_007000 818a5283a1639b4ac8836fbca5906399 1097 Gene3D G3DSA:3.40.1260.20 400 505 1.0E-38 T 14-10-2018 D172_007000 818a5283a1639b4ac8836fbca5906399 1097 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 4.4E-167 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 D172_007000 818a5283a1639b4ac8836fbca5906399 1097 Gene3D G3DSA:2.40.50.140 32 125 3.4E-30 T 14-10-2018 D172_007000 818a5283a1639b4ac8836fbca5906399 1097 Hamap MF_00970 Ribonuclease E [rne]. 1 1004 34.551 T 14-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 D172_007000 818a5283a1639b4ac8836fbca5906399 1097 Pfam PF00575 S1 RNA binding domain 36 118 1.9E-15 T 14-10-2018 IPR003029 S1 domain GO:0003676 D172_000985 63834a0401dd6f0ca80a66a9d1f6a0fc 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 232 1.8E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_000985 63834a0401dd6f0ca80a66a9d1f6a0fc 234 SUPERFAMILY SSF52172 3 130 2.28E-25 T 14-10-2018 IPR011006 CheY-like superfamily D172_000985 63834a0401dd6f0ca80a66a9d1f6a0fc 234 SUPERFAMILY SSF46894 133 232 5.1E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_000985 63834a0401dd6f0ca80a66a9d1f6a0fc 234 SMART SM00448 3 118 1.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_000985 63834a0401dd6f0ca80a66a9d1f6a0fc 234 SMART SM00862 157 232 5.0E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_000985 63834a0401dd6f0ca80a66a9d1f6a0fc 234 Pfam PF00072 Response regulator receiver domain 5 116 9.0E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_000985 63834a0401dd6f0ca80a66a9d1f6a0fc 234 Gene3D G3DSA:3.40.50.2300 1 125 7.5E-24 T 14-10-2018 D172_000985 63834a0401dd6f0ca80a66a9d1f6a0fc 234 Gene3D G3DSA:1.10.10.10 126 234 4.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_016665 446122ebb0476dbae9f65b7ecfec8385 146 Gene3D G3DSA:1.10.3680.10 1 138 1.6E-23 T 14-10-2018 IPR029024 TerB-like D172_016665 446122ebb0476dbae9f65b7ecfec8385 146 Pfam PF05099 Tellurite resistance protein TerB 9 141 2.7E-36 T 14-10-2018 IPR007791 Co-chaperone DjlA, N-terminal D172_016665 446122ebb0476dbae9f65b7ecfec8385 146 SUPERFAMILY SSF158682 16 143 4.45E-26 T 14-10-2018 IPR029024 TerB-like D172_001080 7de026577e2dd65666ebefc99aed53fb 63 Pfam PF00831 Ribosomal L29 protein 4 60 3.9E-24 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001080 7de026577e2dd65666ebefc99aed53fb 63 Gene3D G3DSA:1.10.287.310 1 62 7.4E-30 T 14-10-2018 D172_001080 7de026577e2dd65666ebefc99aed53fb 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.279 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001080 7de026577e2dd65666ebefc99aed53fb 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001080 7de026577e2dd65666ebefc99aed53fb 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 8.4E-23 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001080 7de026577e2dd65666ebefc99aed53fb 63 SUPERFAMILY SSF46561 1 61 2.88E-22 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_019345 263ad578ebdaa97e5024fa655dc3b615 169 Gene3D G3DSA:2.50.20.10 20 169 1.5E-11 T 14-10-2018 D172_019345 263ad578ebdaa97e5024fa655dc3b615 169 SUPERFAMILY SSF89392 26 166 2.12E-7 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX D172_019345 263ad578ebdaa97e5024fa655dc3b615 169 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 24 166 2.6E-7 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like D172_007050 0372fcc428c7ee6d8e0f5d9cf5c5bdfd 412 SUPERFAMILY SSF53901 3 252 2.28E-81 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_007050 0372fcc428c7ee6d8e0f5d9cf5c5bdfd 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 1.3E-64 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D172_007050 0372fcc428c7ee6d8e0f5d9cf5c5bdfd 412 SMART SM00825 Beta-ketoacyl synthase 6 412 3.7E-15 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D172_007050 0372fcc428c7ee6d8e0f5d9cf5c5bdfd 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 1.0E-36 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal D172_007050 0372fcc428c7ee6d8e0f5d9cf5c5bdfd 412 SUPERFAMILY SSF53901 214 411 9.8E-69 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_007050 0372fcc428c7ee6d8e0f5d9cf5c5bdfd 412 PIRSF PIRSF000447 1 412 1.5E-194 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 D172_007050 0372fcc428c7ee6d8e0f5d9cf5c5bdfd 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 4.3E-197 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 D172_007050 0372fcc428c7ee6d8e0f5d9cf5c5bdfd 412 Gene3D G3DSA:3.40.47.10 257 401 7.2E-51 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_007050 0372fcc428c7ee6d8e0f5d9cf5c5bdfd 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site D172_007050 0372fcc428c7ee6d8e0f5d9cf5c5bdfd 412 Gene3D G3DSA:3.40.47.10 1 255 2.0E-93 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_007780 09d1d96f4c24506ce30113b0de8ccbca 400 ProSitePatterns PS01034 Glycosyl hydrolases family 16 active sites. 162 173 - T 14-10-2018 IPR008263 Glycoside hydrolase, family 16, active site GO:0004553|GO:0005975 D172_007780 09d1d96f4c24506ce30113b0de8ccbca 400 Gene3D G3DSA:2.60.120.200 27 296 1.8E-81 T 14-10-2018 D172_007780 09d1d96f4c24506ce30113b0de8ccbca 400 SUPERFAMILY SSF49899 28 293 4.96E-60 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D172_007780 09d1d96f4c24506ce30113b0de8ccbca 400 Gene3D G3DSA:2.60.40.1080 316 400 3.9E-17 T 14-10-2018 D172_007780 09d1d96f4c24506ce30113b0de8ccbca 400 Pfam PF02368 Bacterial Ig-like domain (group 2) 320 388 7.8E-12 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 D172_007780 09d1d96f4c24506ce30113b0de8ccbca 400 SUPERFAMILY SSF49373 318 399 2.24E-15 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments D172_007780 09d1d96f4c24506ce30113b0de8ccbca 400 Pfam PF00722 Glycosyl hydrolases family 16 66 290 2.2E-20 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 D172_007780 09d1d96f4c24506ce30113b0de8ccbca 400 SMART SM00635 319 396 2.4E-14 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 D172_012300 73fe7b2069fb61330599e7cf0fd9d248 248 PRINTS PR01228 Eggshell protein signature 127 142 8.2E-6 T 14-10-2018 D172_012300 73fe7b2069fb61330599e7cf0fd9d248 248 PRINTS PR01228 Eggshell protein signature 63 74 8.2E-6 T 14-10-2018 D172_012300 73fe7b2069fb61330599e7cf0fd9d248 248 PRINTS PR01228 Eggshell protein signature 197 215 8.2E-6 T 14-10-2018 D172_012300 73fe7b2069fb61330599e7cf0fd9d248 248 PRINTS PR01228 Eggshell protein signature 152 162 8.2E-6 T 14-10-2018 D172_012860 b8cf2816c762eba4e170db7dbf439081 255 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 5 248 7.5E-107 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 D172_012860 b8cf2816c762eba4e170db7dbf439081 255 PIRSF PIRSF020736 1 253 1.4E-87 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 D172_012860 b8cf2816c762eba4e170db7dbf439081 255 SUPERFAMILY SSF47240 7 251 3.42E-72 T 14-10-2018 IPR009078 Ferritin-like superfamily D172_012860 b8cf2816c762eba4e170db7dbf439081 255 Gene3D G3DSA:1.20.1260.10 3 72 1.0E-16 T 14-10-2018 IPR012347 Ferritin-like D172_012860 b8cf2816c762eba4e170db7dbf439081 255 Gene3D G3DSA:1.20.1260.10 89 255 3.6E-52 T 14-10-2018 IPR012347 Ferritin-like D172_020715 eccdbe90c9b106526ef552fe08fcdfb1 234 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 D172_020715 eccdbe90c9b106526ef552fe08fcdfb1 234 Gene3D G3DSA:3.40.50.1580 1 234 3.4E-70 T 14-10-2018 D172_020715 eccdbe90c9b106526ef552fe08fcdfb1 234 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 2.6E-101 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 D172_020715 eccdbe90c9b106526ef552fe08fcdfb1 234 SUPERFAMILY SSF53167 3 233 6.15E-88 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 D172_020715 eccdbe90c9b106526ef552fe08fcdfb1 234 Pfam PF01048 Phosphorylase superfamily 17 221 1.5E-35 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 D172_020715 eccdbe90c9b106526ef552fe08fcdfb1 234 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 234 48.26 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 D172_005260 abfcc199d1222736a8279545d48f6536 441 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 95 299 7.7E-18 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 D172_005260 abfcc199d1222736a8279545d48f6536 441 SUPERFAMILY SSF51695 93 431 3.66E-63 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 D172_005260 abfcc199d1222736a8279545d48f6536 441 Gene3D G3DSA:3.20.20.190 89 432 1.5E-32 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 D172_001710 6513335700d96d729c8e7a269e986154 156 SUPERFAMILY SSF52540 22 141 2.83E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_001710 6513335700d96d729c8e7a269e986154 156 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 135 7.9E-42 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 D172_001710 6513335700d96d729c8e7a269e986154 156 Gene3D G3DSA:3.40.50.300 3 154 2.8E-48 T 14-10-2018 D172_001710 6513335700d96d729c8e7a269e986154 156 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 9 140 9.7E-50 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 D172_014075 cfef335706e62cbf6d82c96c17b2510e 183 Gene3D G3DSA:3.40.1410.10 6 182 1.0E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily D172_014075 cfef335706e62cbf6d82c96c17b2510e 183 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 10 182 24.899 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 D172_014075 cfef335706e62cbf6d82c96c17b2510e 183 SUPERFAMILY SSF64288 9 182 1.71E-35 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily D172_014075 cfef335706e62cbf6d82c96c17b2510e 183 Pfam PF04345 Chorismate lyase 10 180 5.1E-30 T 14-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 D172_007140 27d01f4063648e14e40deaddbcf614e4 233 Gene3D G3DSA:3.40.190.10 16 224 1.4E-48 T 14-10-2018 D172_007140 27d01f4063648e14e40deaddbcf614e4 233 SUPERFAMILY SSF53850 10 225 8.25E-37 T 14-10-2018 D172_007140 27d01f4063648e14e40deaddbcf614e4 233 Gene3D G3DSA:3.40.190.10 90 186 1.4E-48 T 14-10-2018 D172_007140 27d01f4063648e14e40deaddbcf614e4 233 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 20 217 3.8E-31 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 D172_007140 27d01f4063648e14e40deaddbcf614e4 233 Pfam PF13531 Bacterial extracellular solute-binding protein 12 225 1.7E-24 T 14-10-2018 D172_012080 1d60d0b3ecdfbdcd6ce7c706f0ba638f 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 84 3.3E-13 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family D172_012080 1d60d0b3ecdfbdcd6ce7c706f0ba638f 96 SUPERFAMILY SSF143011 1 82 5.49E-23 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D172_012080 1d60d0b3ecdfbdcd6ce7c706f0ba638f 96 Gene3D G3DSA:3.30.2310.20 1 95 5.7E-27 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D172_012080 1d60d0b3ecdfbdcd6ce7c706f0ba638f 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 83 4.4E-7 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family D172_012655 e0f9fd026ee4c043a3a4262b132b9499 259 Gene3D G3DSA:3.40.1180.10 6 247 2.1E-94 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 D172_012655 e0f9fd026ee4c043a3a4262b132b9499 259 SUPERFAMILY SSF64005 18 242 3.01E-88 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 D172_012655 e0f9fd026ee4c043a3a4262b132b9499 259 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 19 246 1.7E-94 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 D172_012655 e0f9fd026ee4c043a3a4262b132b9499 259 Pfam PF01255 Putative undecaprenyl diphosphate synthase 26 246 1.3E-80 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 D172_012655 e0f9fd026ee4c043a3a4262b132b9499 259 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 192 209 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 D172_012655 e0f9fd026ee4c043a3a4262b132b9499 259 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 19 247 40.266 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 D172_016210 3a85d6efb094f3d214a45121cf530ab5 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_016210 3a85d6efb094f3d214a45121cf530ab5 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 16.893 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_016210 3a85d6efb094f3d214a45121cf530ab5 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 1.0E-8 T 14-10-2018 D172_016210 3a85d6efb094f3d214a45121cf530ab5 37 SUPERFAMILY SSF57840 1 37 2.35E-16 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_016210 3a85d6efb094f3d214a45121cf530ab5 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 5.0E-23 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_016210 3a85d6efb094f3d214a45121cf530ab5 37 Pfam PF00444 Ribosomal protein L36 1 37 1.8E-18 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_014405 bb9eb090e970bf7e195b7ec4e84a4b2e 239 Gene3D G3DSA:3.40.1350.60 81 238 3.4E-54 T 14-10-2018 D172_014405 bb9eb090e970bf7e195b7ec4e84a4b2e 239 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 236 2.0E-75 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein D172_014405 bb9eb090e970bf7e195b7ec4e84a4b2e 239 Gene3D G3DSA:2.40.50.580 1 80 1.3E-26 T 14-10-2018 D172_014405 bb9eb090e970bf7e195b7ec4e84a4b2e 239 Pfam PF03749 Sugar fermentation stimulation protein 13 229 3.9E-72 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein D172_014405 bb9eb090e970bf7e195b7ec4e84a4b2e 239 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 239 55.822 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein D172_020080 0dd22cc7f880727ad46ee8a2b4fe191e 311 Pfam PF11185 Protein of unknown function (DUF2971) 87 172 3.8E-9 T 14-10-2018 IPR021352 Protein of unknown function DUF2971 D172_008330 cb628a9c4fcd918537f8a1e6209acaaf 110 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 65 78 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_008330 cb628a9c4fcd918537f8a1e6209acaaf 110 Gene3D G3DSA:1.20.1300.10 1 109 6.4E-32 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_008330 cb628a9c4fcd918537f8a1e6209acaaf 110 SUPERFAMILY SSF81343 2 109 1.64E-26 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_008330 cb628a9c4fcd918537f8a1e6209acaaf 110 PIRSF PIRSF000178 1 109 5.1E-22 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_008330 cb628a9c4fcd918537f8a1e6209acaaf 110 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 103 8.1E-23 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_008330 cb628a9c4fcd918537f8a1e6209acaaf 110 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 1 107 1.2E-34 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 D172_005920 539a8341f7319ecae1b954c444e79832 190 Pfam PF13505 Outer membrane protein beta-barrel domain 13 190 2.4E-17 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel D172_005920 539a8341f7319ecae1b954c444e79832 190 Gene3D G3DSA:2.40.160.20 26 190 1.0E-10 T 14-10-2018 D172_005920 539a8341f7319ecae1b954c444e79832 190 SUPERFAMILY SSF56925 34 186 8.63E-10 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D172_002375 6bb7b51deecd2f6e7ca3b39f52a67ff7 334 Gene3D G3DSA:3.40.190.10 23 294 4.9E-117 T 14-10-2018 D172_002375 6bb7b51deecd2f6e7ca3b39f52a67ff7 334 Gene3D G3DSA:3.40.190.10 118 324 4.9E-117 T 14-10-2018 D172_002375 6bb7b51deecd2f6e7ca3b39f52a67ff7 334 SUPERFAMILY SSF53850 21 331 5.67E-69 T 14-10-2018 D172_002375 6bb7b51deecd2f6e7ca3b39f52a67ff7 334 PIRSF PIRSF002825 8 334 1.5E-78 T 14-10-2018 IPR026045 Ferric binding protein D172_002375 6bb7b51deecd2f6e7ca3b39f52a67ff7 334 Pfam PF13343 Bacterial extracellular solute-binding protein 70 292 5.5E-16 T 14-10-2018 D172_008140 9202746ea67a977c67a7d557ba55f0a8 118 Pfam PF02635 DsrE/DsrF-like family 5 115 4.1E-14 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein D172_008140 9202746ea67a977c67a7d557ba55f0a8 118 Gene3D G3DSA:3.40.1260.10 1 117 3.9E-32 T 14-10-2018 IPR027396 DsrEFH-like D172_008140 9202746ea67a977c67a7d557ba55f0a8 118 SUPERFAMILY SSF75169 1 116 7.06E-30 T 14-10-2018 IPR027396 DsrEFH-like D172_004920 28e2097e71ecb7a7543f55c1f05508e6 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 194 4.3E-60 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 D172_004920 28e2097e71ecb7a7543f55c1f05508e6 210 PIRSF PIRSF006102 3 210 1.0E-65 T 14-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 D172_004920 28e2097e71ecb7a7543f55c1f05508e6 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 35.827 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 D172_004920 28e2097e71ecb7a7543f55c1f05508e6 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 207 1.1E-98 T 14-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 D172_014660 c5d417f60e809ad1027397422c282c03 627 SUPERFAMILY SSF56801 5 622 1.03E-153 T 14-10-2018 D172_014660 c5d417f60e809ad1027397422c282c03 627 Pfam PF00501 AMP-binding enzyme 65 502 2.8E-85 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_014660 c5d417f60e809ad1027397422c282c03 627 Gene3D G3DSA:3.40.50.12780 30 495 3.0E-104 T 14-10-2018 D172_014660 c5d417f60e809ad1027397422c282c03 627 ProSitePatterns PS00455 Putative AMP-binding domain signature. 238 249 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_014660 c5d417f60e809ad1027397422c282c03 627 Gene3D G3DSA:3.30.300.30 498 627 1.3E-24 T 14-10-2018 D172_014660 c5d417f60e809ad1027397422c282c03 627 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 5 57 6.1E-11 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 D172_014660 c5d417f60e809ad1027397422c282c03 627 Pfam PF13193 AMP-binding enzyme C-terminal domain 511 590 9.7E-24 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain D172_007930 bc5cd071a8ea0497822f1524b38f34e5 434 SUPERFAMILY SSF46589 1 112 3.77E-29 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 D172_007930 bc5cd071a8ea0497822f1524b38f34e5 434 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 430 40.306 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D172_007930 bc5cd071a8ea0497822f1524b38f34e5 434 SUPERFAMILY SSF55681 116 427 1.19E-97 T 14-10-2018 D172_007930 bc5cd071a8ea0497822f1524b38f34e5 434 Gene3D G3DSA:3.30.930.10 105 434 3.5E-113 T 14-10-2018 D172_007930 bc5cd071a8ea0497822f1524b38f34e5 434 Gene3D G3DSA:1.10.287.40 1 104 8.8E-20 T 14-10-2018 D172_007930 bc5cd071a8ea0497822f1524b38f34e5 434 PIRSF PIRSF001529 1 434 3.2E-177 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D172_007930 bc5cd071a8ea0497822f1524b38f34e5 434 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 231 408 3.0E-32 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 D172_007930 bc5cd071a8ea0497822f1524b38f34e5 434 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 4.1E-29 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 D172_007930 bc5cd071a8ea0497822f1524b38f34e5 434 PRINTS PR00981 Seryl-tRNA synthetase signature 272 284 1.3E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D172_007930 bc5cd071a8ea0497822f1524b38f34e5 434 PRINTS PR00981 Seryl-tRNA synthetase signature 359 375 1.3E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D172_007930 bc5cd071a8ea0497822f1524b38f34e5 434 PRINTS PR00981 Seryl-tRNA synthetase signature 341 357 1.3E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D172_007930 bc5cd071a8ea0497822f1524b38f34e5 434 PRINTS PR00981 Seryl-tRNA synthetase signature 284 297 1.3E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D172_007930 bc5cd071a8ea0497822f1524b38f34e5 434 PRINTS PR00981 Seryl-tRNA synthetase signature 324 337 1.3E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D172_007930 bc5cd071a8ea0497822f1524b38f34e5 434 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 425 2.3E-167 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 D172_018615 64b1fec0849bee416d8b4d91cbe90b38 185 Pfam PF01169 Uncharacterized protein family UPF0016 6 80 1.7E-18 T 14-10-2018 IPR001727 Gdt1 family D172_018615 64b1fec0849bee416d8b4d91cbe90b38 185 Pfam PF01169 Uncharacterized protein family UPF0016 105 178 2.7E-19 T 14-10-2018 IPR001727 Gdt1 family D172_014325 a583d92f97cc6b38e253000105e0ea54 324 PIRSF PIRSF005303 1 319 3.8E-85 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 D172_014325 a583d92f97cc6b38e253000105e0ea54 324 Gene3D G3DSA:3.30.1330.10 1 142 1.2E-48 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily D172_014325 a583d92f97cc6b38e253000105e0ea54 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 148 298 7.3E-9 T 14-10-2018 IPR010918 PurM-like, C-terminal domain D172_014325 a583d92f97cc6b38e253000105e0ea54 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 27 136 1.6E-25 T 14-10-2018 IPR016188 PurM-like, N-terminal domain D172_014325 a583d92f97cc6b38e253000105e0ea54 324 Gene3D G3DSA:3.90.650.10 144 320 6.2E-51 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily D172_014325 a583d92f97cc6b38e253000105e0ea54 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 319 7.5E-104 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 D172_014325 a583d92f97cc6b38e253000105e0ea54 324 SUPERFAMILY SSF55326 2 136 2.09E-37 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily D172_014325 a583d92f97cc6b38e253000105e0ea54 324 SUPERFAMILY SSF56042 140 303 1.94E-39 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily D172_014325 a583d92f97cc6b38e253000105e0ea54 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 319 28.054 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 D172_001755 7ceed4f6c398b7924a9ba9b5f62a83b8 212 Gene3D G3DSA:1.25.40.10 26 210 3.0E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_001755 7ceed4f6c398b7924a9ba9b5f62a83b8 212 SUPERFAMILY SSF81901 71 178 4.19E-19 T 14-10-2018 D172_001755 7ceed4f6c398b7924a9ba9b5f62a83b8 212 Pfam PF08238 Sel1 repeat 112 147 4.7E-5 T 14-10-2018 IPR006597 Sel1-like repeat D172_001755 7ceed4f6c398b7924a9ba9b5f62a83b8 212 Pfam PF08238 Sel1 repeat 156 175 46.0 T 14-10-2018 IPR006597 Sel1-like repeat D172_001755 7ceed4f6c398b7924a9ba9b5f62a83b8 212 Pfam PF08238 Sel1 repeat 81 110 0.006 T 14-10-2018 IPR006597 Sel1-like repeat D172_001755 7ceed4f6c398b7924a9ba9b5f62a83b8 212 SMART SM00671 112 147 1.3E-5 T 14-10-2018 IPR006597 Sel1-like repeat D172_001755 7ceed4f6c398b7924a9ba9b5f62a83b8 212 SMART SM00671 76 111 0.0023 T 14-10-2018 IPR006597 Sel1-like repeat D172_001755 7ceed4f6c398b7924a9ba9b5f62a83b8 212 SMART SM00671 148 183 110.0 T 14-10-2018 IPR006597 Sel1-like repeat D172_006335 55c062c196a0dc527dce67f100206b9d 267 Pfam PF16956 Putative general bacterial porin 1 267 1.1E-91 T 14-10-2018 IPR031593 Putative general bacterial porin D172_006335 55c062c196a0dc527dce67f100206b9d 267 SUPERFAMILY SSF56935 29 174 4.27E-6 T 14-10-2018 D172_001195 2c6d2f9dbd93c4e02a1fad39332af8ee 301 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 277 9.2E-80 T 14-10-2018 IPR017039 Virulence factor BrkB D172_001195 2c6d2f9dbd93c4e02a1fad39332af8ee 301 PIRSF PIRSF035875 5 295 7.5E-59 T 14-10-2018 IPR017039 Virulence factor BrkB D172_001195 2c6d2f9dbd93c4e02a1fad39332af8ee 301 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 12 291 23.327 T 14-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial D172_001195 2c6d2f9dbd93c4e02a1fad39332af8ee 301 Pfam PF03631 Virulence factor BrkB 32 277 1.3E-57 T 14-10-2018 IPR017039 Virulence factor BrkB D172_008125 3e8c31d2e8eb29f163c10ca7e9d4f918 228 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 84 98 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 D172_008125 3e8c31d2e8eb29f163c10ca7e9d4f918 228 Gene3D G3DSA:3.30.70.1560 113 212 6.5E-40 T 14-10-2018 D172_008125 3e8c31d2e8eb29f163c10ca7e9d4f918 228 Pfam PF00849 RNA pseudouridylate synthase 49 193 1.6E-16 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_008125 3e8c31d2e8eb29f163c10ca7e9d4f918 228 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 53 222 1.3E-55 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 D172_008125 3e8c31d2e8eb29f163c10ca7e9d4f918 228 SUPERFAMILY SSF55120 39 221 1.57E-43 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_008125 3e8c31d2e8eb29f163c10ca7e9d4f918 228 Gene3D G3DSA:3.30.70.580 38 112 1.7E-26 T 14-10-2018 D172_003535 4c19c6676c9344fbdaed4f7a23dfa826 145 PIRSF PIRSF005276 1 145 8.2E-53 T 14-10-2018 IPR007481 Stringent starvation protein B D172_003535 4c19c6676c9344fbdaed4f7a23dfa826 145 SUPERFAMILY SSF101738 1 110 1.44E-44 T 14-10-2018 IPR036760 SspB-like superfamily D172_003535 4c19c6676c9344fbdaed4f7a23dfa826 145 Pfam PF04386 Stringent starvation protein B 4 145 1.2E-33 T 14-10-2018 IPR007481 Stringent starvation protein B D172_003535 4c19c6676c9344fbdaed4f7a23dfa826 145 Gene3D G3DSA:2.30.30.220 1 126 1.5E-49 T 14-10-2018 IPR036760 SspB-like superfamily D172_014845 c8eeedcd3ec940e24f6c9b1006d3c2b9 375 SMART SM00448 4 117 2.1E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_014845 c8eeedcd3ec940e24f6c9b1006d3c2b9 375 Pfam PF00072 Response regulator receiver domain 6 117 2.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_014845 c8eeedcd3ec940e24f6c9b1006d3c2b9 375 Gene3D G3DSA:3.40.50.12740 4 175 1.3E-39 T 14-10-2018 D172_014845 c8eeedcd3ec940e24f6c9b1006d3c2b9 375 SUPERFAMILY SSF52172 5 138 2.28E-35 T 14-10-2018 IPR011006 CheY-like superfamily D172_006565 8e05cbda62f1d90ad4afedc84e058a63 275 SUPERFAMILY SSF53098 101 260 4.43E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_006565 8e05cbda62f1d90ad4afedc84e058a63 275 Pfam PF00665 Integrase core domain 108 221 3.2E-27 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_006565 8e05cbda62f1d90ad4afedc84e058a63 275 Gene3D G3DSA:3.30.420.10 107 243 6.5E-24 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_014815 101ba1a9eafade1821ce8de6e4233905 204 SUPERFAMILY SSF46894 128 204 4.08E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_014815 101ba1a9eafade1821ce8de6e4233905 204 SMART SM00421 141 198 3.5E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_014815 101ba1a9eafade1821ce8de6e4233905 204 Pfam PF00072 Response regulator receiver domain 4 119 3.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_014815 101ba1a9eafade1821ce8de6e4233905 204 SUPERFAMILY SSF52172 1 125 6.55E-28 T 14-10-2018 IPR011006 CheY-like superfamily D172_014815 101ba1a9eafade1821ce8de6e4233905 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 4.5E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_014815 101ba1a9eafade1821ce8de6e4233905 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 4.5E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_014815 101ba1a9eafade1821ce8de6e4233905 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 4.5E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_014815 101ba1a9eafade1821ce8de6e4233905 204 SMART SM00448 2 119 5.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_014815 101ba1a9eafade1821ce8de6e4233905 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 198 5.9E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_014815 101ba1a9eafade1821ce8de6e4233905 204 Gene3D G3DSA:3.40.50.12740 2 204 1.2E-54 T 14-10-2018 D172_012535 afd2a16fac97df05d171ce92065d6e49 292 Pfam PF11219 Protein of unknown function (DUF3014) 132 286 1.1E-55 T 14-10-2018 IPR021382 Protein of unknown function DUF3014 D172_018875 aeb92a8a2b8f8ae6b32ed22481e81f8d 389 SUPERFAMILY SSF111369 52 301 7.85E-84 T 14-10-2018 D172_018875 aeb92a8a2b8f8ae6b32ed22481e81f8d 389 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 376 3.9E-85 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D172_018875 aeb92a8a2b8f8ae6b32ed22481e81f8d 389 Gene3D G3DSA:1.10.287.470 99 172 1.1E-109 T 14-10-2018 D172_018875 aeb92a8a2b8f8ae6b32ed22481e81f8d 389 Gene3D G3DSA:2.40.420.20 305 374 1.1E-109 T 14-10-2018 D172_018875 aeb92a8a2b8f8ae6b32ed22481e81f8d 389 Gene3D G3DSA:2.40.50.100 64 208 1.1E-109 T 14-10-2018 D172_018875 aeb92a8a2b8f8ae6b32ed22481e81f8d 389 Gene3D G3DSA:2.40.30.170 51 304 1.1E-109 T 14-10-2018 D172_018875 aeb92a8a2b8f8ae6b32ed22481e81f8d 389 Pfam PF00529 HlyD membrane-fusion protein of T1SS 41 361 1.5E-10 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D172_018875 aeb92a8a2b8f8ae6b32ed22481e81f8d 389 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 294 3.9E-14 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D172_004180 e626f524bd549dc7f1ef9c9bae9bb567 741 SUPERFAMILY SSF53474 487 738 1.62E-77 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_004180 e626f524bd549dc7f1ef9c9bae9bb567 741 SUPERFAMILY SSF82171 24 473 9.55E-65 T 14-10-2018 D172_004180 e626f524bd549dc7f1ef9c9bae9bb567 741 Gene3D G3DSA:2.140.10.30 25 482 5.4E-156 T 14-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily D172_004180 e626f524bd549dc7f1ef9c9bae9bb567 741 Pfam PF00326 Prolyl oligopeptidase family 542 739 3.3E-58 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 D172_004180 e626f524bd549dc7f1ef9c9bae9bb567 741 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 128 451 4.7E-94 T 14-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 D172_004180 e626f524bd549dc7f1ef9c9bae9bb567 741 Gene3D G3DSA:3.40.50.1820 488 740 1.9E-79 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_020640 83fbffa3d908b0bc2941768692e8acee 217 Pfam PF12261 Thermostable hemolysin 25 186 4.7E-39 T 14-10-2018 IPR022050 Thermostable hemolysin D172_000665 ec53b322f4c65fadc9370bbfabba4a64 586 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 60 391 2.7E-76 T 14-10-2018 IPR003776 YcaO-like domain D172_000665 ec53b322f4c65fadc9370bbfabba4a64 586 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 14 403 9.5E-123 T 14-10-2018 IPR003776 YcaO-like domain D172_013660 c2202f08c0a02431faa457704ecfec1d 283 Pfam PF00303 Thymidylate synthase 2 283 2.2E-76 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D172_013660 c2202f08c0a02431faa457704ecfec1d 283 SUPERFAMILY SSF55831 1 283 5.23E-95 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D172_013660 c2202f08c0a02431faa457704ecfec1d 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 2.1E-48 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D172_013660 c2202f08c0a02431faa457704ecfec1d 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 2.5E-16 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D172_013660 c2202f08c0a02431faa457704ecfec1d 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 2.5E-16 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D172_013660 c2202f08c0a02431faa457704ecfec1d 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 2.5E-16 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D172_013660 c2202f08c0a02431faa457704ecfec1d 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 2.5E-16 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D172_013660 c2202f08c0a02431faa457704ecfec1d 283 Gene3D G3DSA:3.30.572.10 1 283 5.0E-83 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D172_013660 c2202f08c0a02431faa457704ecfec1d 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D172_013660 c2202f08c0a02431faa457704ecfec1d 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 32.137 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 D172_000560 b0100be3a943b4522d9a631420757acb 204 Pfam PF03083 Sugar efflux transporter for intercellular exchange 7 84 7.8E-6 T 14-10-2018 IPR004316 SWEET sugar transporter GO:0016021 Reactome: R-HSA-189200 D172_000560 b0100be3a943b4522d9a631420757acb 204 Pfam PF04193 PQ loop repeat 117 163 1.2E-5 T 14-10-2018 IPR006603 PQ-loop repeat D172_000560 b0100be3a943b4522d9a631420757acb 204 Gene3D G3DSA:1.20.1280.290 1 87 8.5E-11 T 14-10-2018 D172_020740 5fc4f1c21cedb09caebe0a59f3ed896e 247 Gene3D G3DSA:2.40.30.10 1 96 1.4E-27 T 14-10-2018 D172_020740 5fc4f1c21cedb09caebe0a59f3ed896e 247 SUPERFAMILY SSF63380 3 100 4.48E-22 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D172_020740 5fc4f1c21cedb09caebe0a59f3ed896e 247 Pfam PF00175 Oxidoreductase NAD-binding domain 111 221 3.0E-17 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D172_020740 5fc4f1c21cedb09caebe0a59f3ed896e 247 SUPERFAMILY SSF52343 103 247 9.82E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D172_020740 5fc4f1c21cedb09caebe0a59f3ed896e 247 Gene3D G3DSA:3.40.50.80 97 247 1.2E-41 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D172_020740 5fc4f1c21cedb09caebe0a59f3ed896e 247 Pfam PF00970 Oxidoreductase FAD-binding domain 18 91 3.7E-5 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 D172_006080 e5b02b3c16f876d6246751f9977a2018 217 Pfam PF00583 Acetyltransferase (GNAT) family 121 187 2.3E-6 T 14-10-2018 IPR000182 GNAT domain D172_006080 e5b02b3c16f876d6246751f9977a2018 217 Gene3D G3DSA:3.40.630.30 9 209 4.4E-15 T 14-10-2018 D172_006080 e5b02b3c16f876d6246751f9977a2018 217 SUPERFAMILY SSF55729 9 189 8.51E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_004845 3203ef1d765972085b5285d5e98783be 560 SUPERFAMILY SSF81340 5 428 1.24E-84 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 D172_004845 3203ef1d765972085b5285d5e98783be 560 Gene3D G3DSA:1.10.3080.10 3 424 2.0E-78 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 D172_004845 3203ef1d765972085b5285d5e98783be 560 PRINTS PR00762 Chloride channel signature 358 374 1.3E-18 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 D172_004845 3203ef1d765972085b5285d5e98783be 560 PRINTS PR00762 Chloride channel signature 112 131 1.3E-18 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 D172_004845 3203ef1d765972085b5285d5e98783be 560 PRINTS PR00762 Chloride channel signature 376 395 1.3E-18 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 D172_004845 3203ef1d765972085b5285d5e98783be 560 PRINTS PR00762 Chloride channel signature 163 182 1.3E-18 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 D172_004845 3203ef1d765972085b5285d5e98783be 560 Pfam PF00654 Voltage gated chloride channel 73 407 9.4E-70 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 D172_008855 7941b5f77e90d1b15b4732ef807395e7 211 Pfam PF16925 Bacterial transcriptional repressor C-terminal 96 209 1.1E-45 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal D172_008855 7941b5f77e90d1b15b4732ef807395e7 211 SUPERFAMILY SSF46689 15 90 7.7E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_008855 7941b5f77e90d1b15b4732ef807395e7 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 69 7.8E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_008855 7941b5f77e90d1b15b4732ef807395e7 211 Gene3D G3DSA:1.10.357.10 24 211 8.3E-56 T 14-10-2018 D172_008855 7941b5f77e90d1b15b4732ef807395e7 211 SUPERFAMILY SSF48498 96 209 6.47E-21 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D172_018930 68768d68c90cc132dc750bfd84ca54ac 1042 Gene3D G3DSA:2.60.40.1120 31 113 4.2E-6 T 14-10-2018 D172_018930 68768d68c90cc132dc750bfd84ca54ac 1042 SUPERFAMILY SSF49464 33 126 5.49E-7 T 14-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily D172_018930 68768d68c90cc132dc750bfd84ca54ac 1042 Pfam PF07715 TonB-dependent Receptor Plug Domain 136 236 2.2E-4 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_018930 68768d68c90cc132dc750bfd84ca54ac 1042 SUPERFAMILY SSF56935 120 999 5.86E-61 T 14-10-2018 D172_018930 68768d68c90cc132dc750bfd84ca54ac 1042 Gene3D G3DSA:2.170.130.10 114 241 6.7E-5 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_018930 68768d68c90cc132dc750bfd84ca54ac 1042 Pfam PF13620 Carboxypeptidase regulatory-like domain 33 114 1.7E-14 T 14-10-2018 D172_005570 fcaf784eb275011bafeebc286744f84a 268 Pfam PF01578 Cytochrome C assembly protein 42 264 8.7E-29 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 D172_007305 d6ae94afc1c47e12142e144fad148449 316 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 116 306 4.1E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase D172_007305 d6ae94afc1c47e12142e144fad148449 316 Gene3D G3DSA:3.60.10.10 98 316 2.0E-19 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D172_007305 d6ae94afc1c47e12142e144fad148449 316 SUPERFAMILY SSF56219 97 312 1.83E-22 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D172_005280 af7dbf8871c46da364024c3933e4c8bf 760 Gene3D G3DSA:2.40.170.20 47 760 5.1E-130 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_005280 af7dbf8871c46da364024c3933e4c8bf 760 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 164 2.3E-10 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_005280 af7dbf8871c46da364024c3933e4c8bf 760 Pfam PF00593 TonB dependent receptor 284 751 2.6E-39 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_005280 af7dbf8871c46da364024c3933e4c8bf 760 SUPERFAMILY SSF56935 35 759 9.31E-101 T 14-10-2018 D172_017090 c2f3fcebcac64f5854b272d3bd7361de 99 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 98 3.1E-25 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD D172_015325 360669b61b71f1062c8b0df95d5015d5 339 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 326 2.6E-163 T 14-10-2018 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00520+4.2.1.115|MetaCyc: PWY-6143|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 D172_015325 360669b61b71f1062c8b0df95d5015d5 339 Pfam PF02719 Polysaccharide biosynthesis protein 7 281 1.2E-97 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain D172_015325 360669b61b71f1062c8b0df95d5015d5 339 Gene3D G3DSA:3.40.50.720 5 310 4.0E-124 T 14-10-2018 D172_015325 360669b61b71f1062c8b0df95d5015d5 339 SUPERFAMILY SSF51735 1 248 2.1E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_015325 360669b61b71f1062c8b0df95d5015d5 339 Gene3D G3DSA:3.90.25.30 171 314 4.0E-124 T 14-10-2018 D172_016295 6311adad301972252bc371b3e51c5d49 107 Pfam PF06291 Bor protein 29 101 4.1E-12 T 14-10-2018 IPR010438 Bor GO:0009279 D172_009925 f7e7ef9edf34c71b8730840b677f1e7f 215 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 203 3.6E-10 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 D172_009750 bfcbe2c1bbed64fb6e3c85c792e9631d 237 Gene3D G3DSA:3.30.70.980 83 234 1.8E-41 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_009750 bfcbe2c1bbed64fb6e3c85c792e9631d 237 Gene3D G3DSA:3.30.70.980 131 201 1.8E-41 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_009750 bfcbe2c1bbed64fb6e3c85c792e9631d 237 Pfam PF01709 Transcriptional regulator 4 235 4.9E-72 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_009750 bfcbe2c1bbed64fb6e3c85c792e9631d 237 SUPERFAMILY SSF75625 1 236 4.58E-75 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_009750 bfcbe2c1bbed64fb6e3c85c792e9631d 237 Gene3D G3DSA:1.10.10.200 17 78 3.1E-18 T 14-10-2018 IPR017856 Integrase-like, N-terminal D172_009750 bfcbe2c1bbed64fb6e3c85c792e9631d 237 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 26.316 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_006455 513ae58318fb9099cb9a169f092d9bb4 99 SMART SM00411 3 92 5.3E-43 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_006455 513ae58318fb9099cb9a169f092d9bb4 99 Gene3D G3DSA:4.10.520.10 1 98 1.3E-38 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D172_006455 513ae58318fb9099cb9a169f092d9bb4 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 8.5E-34 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_006455 513ae58318fb9099cb9a169f092d9bb4 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 D172_006455 513ae58318fb9099cb9a169f092d9bb4 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.4E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_006455 513ae58318fb9099cb9a169f092d9bb4 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.4E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_006455 513ae58318fb9099cb9a169f092d9bb4 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.4E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_006455 513ae58318fb9099cb9a169f092d9bb4 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 3.6E-50 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 D172_006455 513ae58318fb9099cb9a169f092d9bb4 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.23 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 D172_006455 513ae58318fb9099cb9a169f092d9bb4 99 SUPERFAMILY SSF47729 3 92 2.21E-32 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D172_016855 e983d47f221c1e4963d438a9c6a6ebb6 100 Pfam PF01050 Mannose-6-phosphate isomerase 3 88 3.2E-23 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 D172_016855 e983d47f221c1e4963d438a9c6a6ebb6 100 SUPERFAMILY SSF51182 12 73 5.44E-10 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily D172_011120 7c5bf4c959042dbb5d77632713cc84d0 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 34 - T 14-10-2018 IPR019844 Cold-shock conserved site D172_011120 7c5bf4c959042dbb5d77632713cc84d0 67 PRINTS PR00050 Cold shock protein signature 25 34 1.1E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_011120 7c5bf4c959042dbb5d77632713cc84d0 67 PRINTS PR00050 Cold shock protein signature 5 20 1.1E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_011120 7c5bf4c959042dbb5d77632713cc84d0 67 PRINTS PR00050 Cold shock protein signature 40 58 1.1E-15 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_011120 7c5bf4c959042dbb5d77632713cc84d0 67 SMART SM00357 4 67 3.7E-26 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 D172_011120 7c5bf4c959042dbb5d77632713cc84d0 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.0E-27 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 D172_011120 7c5bf4c959042dbb5d77632713cc84d0 67 Gene3D G3DSA:2.40.50.140 2 66 5.9E-28 T 14-10-2018 D172_011120 7c5bf4c959042dbb5d77632713cc84d0 67 SUPERFAMILY SSF50249 3 65 1.9E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_011120 7c5bf4c959042dbb5d77632713cc84d0 67 PIRSF PIRSF002599 1 67 3.7E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 D172_001815 47f68d5563a7758ef2b10127d0ad653a 107 Gene3D G3DSA:1.10.760.10 18 106 7.9E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_001815 47f68d5563a7758ef2b10127d0ad653a 107 SUPERFAMILY SSF46626 15 106 2.44E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_001815 47f68d5563a7758ef2b10127d0ad653a 107 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 23 103 1.7E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_010800 3bfff0f92f86acdb9276029af47223d4 296 Gene3D G3DSA:3.40.50.1820 58 295 2.5E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_010800 3bfff0f92f86acdb9276029af47223d4 296 SUPERFAMILY SSF53474 71 295 5.86E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_010800 3bfff0f92f86acdb9276029af47223d4 296 Pfam PF01738 Dienelactone hydrolase family 86 293 5.2E-50 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 D172_001545 25e50ad165b5ace38656830584bff0de 574 SUPERFAMILY SSF116726 208 282 4.45E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D172_001545 25e50ad165b5ace38656830584bff0de 574 SUPERFAMILY SSF116726 292 350 4.32E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D172_001545 25e50ad165b5ace38656830584bff0de 574 Pfam PF03600 Citrate transporter 30 519 1.1E-31 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 D172_001545 25e50ad165b5ace38656830584bff0de 574 Gene3D G3DSA:3.30.70.1450 208 279 1.7E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D172_001545 25e50ad165b5ace38656830584bff0de 574 Gene3D G3DSA:3.30.70.1450 290 355 7.9E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D172_001545 25e50ad165b5ace38656830584bff0de 574 Pfam PF02080 TrkA-C domain 211 276 2.9E-7 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 D172_001545 25e50ad165b5ace38656830584bff0de 574 Pfam PF02080 TrkA-C domain 293 349 8.9E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 D172_003350 9cb364bc7925dc248bf3a93a7736497d 169 SUPERFAMILY SSF110087 13 153 5.1E-39 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily D172_003350 9cb364bc7925dc248bf3a93a7736497d 169 Pfam PF04314 Copper chaperone PCu(A)C 38 143 7.0E-29 T 14-10-2018 IPR007410 Copper chaperone PCuAC D172_003350 9cb364bc7925dc248bf3a93a7736497d 169 Gene3D G3DSA:2.60.40.1890 41 156 5.9E-32 T 14-10-2018 IPR036182 Copper chaperone PCuAC superfamily D172_011845 2f98f5bedb5a152a4f9f92198332b892 307 SUPERFAMILY SSF52768 12 303 5.94E-88 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily D172_011845 2f98f5bedb5a152a4f9f92198332b892 307 Gene3D G3DSA:3.40.800.10 1 307 3.1E-99 T 14-10-2018 D172_011845 2f98f5bedb5a152a4f9f92198332b892 307 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 D172_011845 2f98f5bedb5a152a4f9f92198332b892 307 PIRSF PIRSF036979 12 305 2.2E-90 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 D172_011845 2f98f5bedb5a152a4f9f92198332b892 307 TIGRFAM TIGR01230 agmatinase: agmatinase 22 299 4.9E-90 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 D172_011845 2f98f5bedb5a152a4f9f92198332b892 307 Pfam PF00491 Arginase family 33 297 1.4E-84 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 D172_007720 7487ce442247285f6e86fe8116a11df7 291 Gene3D G3DSA:2.120.10.30 1 288 3.1E-84 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_007720 7487ce442247285f6e86fe8116a11df7 291 SUPERFAMILY SSF63829 14 285 1.41E-52 T 14-10-2018 D172_007720 7487ce442247285f6e86fe8116a11df7 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 17 34 1.4E-32 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) D172_007720 7487ce442247285f6e86fe8116a11df7 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 131 153 1.4E-32 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) D172_007720 7487ce442247285f6e86fe8116a11df7 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 236 254 1.4E-32 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) D172_007720 7487ce442247285f6e86fe8116a11df7 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 91 112 1.4E-32 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) D172_007720 7487ce442247285f6e86fe8116a11df7 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 154 174 1.4E-32 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) D172_007720 7487ce442247285f6e86fe8116a11df7 291 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 195 212 1.4E-32 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) D172_007720 7487ce442247285f6e86fe8116a11df7 291 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 16 255 2.8E-60 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region D172_000340 22a3e75be7be0c77965d412d088fab46 421 SMART SM00257 374 417 1.3E-15 T 14-10-2018 IPR018392 LysM domain D172_000340 22a3e75be7be0c77965d412d088fab46 421 SMART SM00257 323 366 1.3E-13 T 14-10-2018 IPR018392 LysM domain D172_000340 22a3e75be7be0c77965d412d088fab46 421 Gene3D G3DSA:3.10.350.10 320 369 1.3E-16 T 14-10-2018 IPR036779 LysM domain superfamily D172_000340 22a3e75be7be0c77965d412d088fab46 421 Gene3D G3DSA:3.10.350.10 370 420 7.7E-17 T 14-10-2018 IPR036779 LysM domain superfamily D172_000340 22a3e75be7be0c77965d412d088fab46 421 SUPERFAMILY SSF54106 374 416 1.96E-11 T 14-10-2018 D172_000340 22a3e75be7be0c77965d412d088fab46 421 SUPERFAMILY SSF53955 100 243 1.05E-38 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily D172_000340 22a3e75be7be0c77965d412d088fab46 421 Gene3D G3DSA:1.10.530.10 95 252 2.1E-28 T 14-10-2018 D172_000340 22a3e75be7be0c77965d412d088fab46 421 SUPERFAMILY SSF54106 321 366 4.45E-11 T 14-10-2018 D172_000340 22a3e75be7be0c77965d412d088fab46 421 Pfam PF01464 Transglycosylase SLT domain 115 214 4.7E-22 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 D172_000340 22a3e75be7be0c77965d412d088fab46 421 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 121 149 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 D172_000340 22a3e75be7be0c77965d412d088fab46 421 Pfam PF01476 LysM domain 324 366 3.7E-13 T 14-10-2018 IPR018392 LysM domain D172_000340 22a3e75be7be0c77965d412d088fab46 421 Pfam PF01476 LysM domain 375 416 4.3E-14 T 14-10-2018 IPR018392 LysM domain D172_008765 0a387abc04428329d4db4605b77e2696 148 SUPERFAMILY SSF52172 36 147 1.85E-25 T 14-10-2018 IPR011006 CheY-like superfamily D172_008765 0a387abc04428329d4db4605b77e2696 148 Pfam PF00072 Response regulator receiver domain 37 143 1.0E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_008765 0a387abc04428329d4db4605b77e2696 148 Gene3D G3DSA:3.40.50.2300 22 148 1.5E-27 T 14-10-2018 D172_008765 0a387abc04428329d4db4605b77e2696 148 SMART SM00448 35 143 1.9E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_010440 c95583dd0ed1c4af8fd58a9d324151a4 297 Pfam PF05114 Protein of unknown function (DUF692) 8 271 7.3E-102 T 14-10-2018 IPR007801 Uncharacterised protein family UPF0276 D172_010440 c95583dd0ed1c4af8fd58a9d324151a4 297 SUPERFAMILY SSF51658 25 214 5.2E-15 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily D172_010440 c95583dd0ed1c4af8fd58a9d324151a4 297 Gene3D G3DSA:3.20.20.150 5 282 4.8E-91 T 14-10-2018 D172_020300 f107494ed68140f1d89abdc7384fa732 237 Gene3D G3DSA:3.90.550.10 1 190 1.5E-19 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_020300 f107494ed68140f1d89abdc7384fa732 237 SUPERFAMILY SSF53448 1 189 2.44E-23 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_020300 f107494ed68140f1d89abdc7384fa732 237 Pfam PF00535 Glycosyl transferase family 2 3 80 1.1E-9 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D172_019245 c7e3a600c4937666399ccc9817a41f92 390 Pfam PF07690 Major Facilitator Superfamily 9 320 2.7E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_019245 c7e3a600c4937666399ccc9817a41f92 390 Gene3D G3DSA:1.20.1250.20 3 377 3.3E-54 T 14-10-2018 D172_019245 c7e3a600c4937666399ccc9817a41f92 390 SUPERFAMILY SSF103473 3 378 3.14E-65 T 14-10-2018 IPR036259 MFS transporter superfamily D172_019245 c7e3a600c4937666399ccc9817a41f92 390 PRINTS PR01035 Tetracycline resistance protein signature 158 178 2.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D172_019245 c7e3a600c4937666399ccc9817a41f92 390 PRINTS PR01035 Tetracycline resistance protein signature 40 59 2.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D172_019245 c7e3a600c4937666399ccc9817a41f92 390 PRINTS PR01035 Tetracycline resistance protein signature 98 119 2.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D172_019245 c7e3a600c4937666399ccc9817a41f92 390 PRINTS PR01035 Tetracycline resistance protein signature 10 26 2.1E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 D172_017940 9ccdffd782ea2956d689f472edefd38f 401 Pfam PF01425 Amidase 23 203 2.9E-46 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 D172_017940 9ccdffd782ea2956d689f472edefd38f 401 SUPERFAMILY SSF75304 23 395 1.44E-74 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 D172_017940 9ccdffd782ea2956d689f472edefd38f 401 Gene3D G3DSA:3.90.1300.10 18 395 5.4E-78 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 D172_011230 46aef114c642eedc06b7e60078000ef7 175 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 170 3.5E-49 T 14-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) D172_017280 00570217219b15caee04214f96c46797 686 Gene3D G3DSA:2.170.130.10 49 166 1.6E-27 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_017280 00570217219b15caee04214f96c46797 686 Pfam PF00593 TonB dependent receptor 178 668 4.4E-21 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_017280 00570217219b15caee04214f96c46797 686 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 159 1.3E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_017280 00570217219b15caee04214f96c46797 686 SUPERFAMILY SSF56935 38 673 1.26E-81 T 14-10-2018 D172_017280 00570217219b15caee04214f96c46797 686 Gene3D G3DSA:2.40.170.20 167 669 2.6E-35 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_014420 a15880d68510ac13a6907af7ca175a71 473 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 231 293 2.4E-20 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 D172_014420 a15880d68510ac13a6907af7ca175a71 473 Gene3D G3DSA:3.30.460.10 40 200 2.4E-59 T 14-10-2018 D172_014420 a15880d68510ac13a6907af7ca175a71 473 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 42 467 1.9E-158 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 D172_014420 a15880d68510ac13a6907af7ca175a71 473 Gene3D G3DSA:1.10.3090.10 203 452 1.4E-88 T 14-10-2018 D172_014420 a15880d68510ac13a6907af7ca175a71 473 SUPERFAMILY SSF81301 46 201 4.14E-38 T 14-10-2018 D172_014420 a15880d68510ac13a6907af7ca175a71 473 Pfam PF12626 Polymerase A arginine-rich C-terminus 350 466 1.1E-37 T 14-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain D172_014420 a15880d68510ac13a6907af7ca175a71 473 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 37 469 36.921 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 D172_014420 a15880d68510ac13a6907af7ca175a71 473 SUPERFAMILY SSF81891 203 437 2.35E-46 T 14-10-2018 D172_014420 a15880d68510ac13a6907af7ca175a71 473 Pfam PF01743 Poly A polymerase head domain 73 203 6.9E-37 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 D172_013385 97da5268ffd4440837ca4791f37e9773 127 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 31 97 6.9E-23 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 D172_013385 97da5268ffd4440837ca4791f37e9773 127 Pfam PF04347 Flagellar biosynthesis protein, FliO 51 118 4.1E-16 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 D172_012915 51f6e726ed57b437a58cbf06ad609399 748 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 700 0.0 T 14-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D172_012915 51f6e726ed57b437a58cbf06ad609399 748 Gene3D G3DSA:3.40.50.720 309 494 3.5E-62 T 14-10-2018 D172_012915 51f6e726ed57b437a58cbf06ad609399 748 SUPERFAMILY SSF48179 611 700 1.28E-21 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_012915 51f6e726ed57b437a58cbf06ad609399 748 SUPERFAMILY SSF48179 492 592 2.89E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_012915 51f6e726ed57b437a58cbf06ad609399 748 Gene3D G3DSA:1.10.1040.50 495 695 6.1E-69 T 14-10-2018 D172_012915 51f6e726ed57b437a58cbf06ad609399 748 Gene3D G3DSA:3.90.226.10 2 307 1.1E-90 T 14-10-2018 D172_012915 51f6e726ed57b437a58cbf06ad609399 748 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 103 123 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 D172_012915 51f6e726ed57b437a58cbf06ad609399 748 SUPERFAMILY SSF52096 2 301 3.32E-61 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_012915 51f6e726ed57b437a58cbf06ad609399 748 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 202 3.4E-36 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 D172_012915 51f6e726ed57b437a58cbf06ad609399 748 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 489 514 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D172_012915 51f6e726ed57b437a58cbf06ad609399 748 SUPERFAMILY SSF51735 308 490 4.87E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_012915 51f6e726ed57b437a58cbf06ad609399 748 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 492 585 9.6E-27 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D172_012915 51f6e726ed57b437a58cbf06ad609399 748 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 311 489 1.5E-57 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 D172_017545 521029bbc8c505c4b487b748a523d81b 242 Gene3D G3DSA:3.40.1730.10 6 237 3.6E-59 T 14-10-2018 IPR038225 T6S-associated protein TagF superfamily D172_017545 521029bbc8c505c4b487b748a523d81b 242 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 9 138 7.6E-36 T 14-10-2018 IPR017748 T6S-associated protein TagF D172_017545 521029bbc8c505c4b487b748a523d81b 242 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 9 137 4.6E-36 T 14-10-2018 IPR017748 T6S-associated protein TagF D172_017545 521029bbc8c505c4b487b748a523d81b 242 PIRSF PIRSF029287 1 232 1.0E-33 T 14-10-2018 IPR017748 T6S-associated protein TagF D172_006360 767874f353b9a81df4a9888363c55d1f 216 SUPERFAMILY SSF52172 3 154 1.04E-33 T 14-10-2018 IPR011006 CheY-like superfamily D172_006360 767874f353b9a81df4a9888363c55d1f 216 SMART SM00448 2 115 1.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_006360 767874f353b9a81df4a9888363c55d1f 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 204 2.6E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_006360 767874f353b9a81df4a9888363c55d1f 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_006360 767874f353b9a81df4a9888363c55d1f 216 SMART SM00421 147 204 2.1E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_006360 767874f353b9a81df4a9888363c55d1f 216 Gene3D G3DSA:3.40.50.12740 2 210 5.5E-61 T 14-10-2018 D172_006360 767874f353b9a81df4a9888363c55d1f 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 8.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_006360 767874f353b9a81df4a9888363c55d1f 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 8.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_006360 767874f353b9a81df4a9888363c55d1f 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 8.0E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_006360 767874f353b9a81df4a9888363c55d1f 216 SUPERFAMILY SSF46894 133 211 4.08E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_006360 767874f353b9a81df4a9888363c55d1f 216 Pfam PF00072 Response regulator receiver domain 4 115 9.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_002090 e855673924ef8ccbada38525d764e6b1 161 PIRSF PIRSF003174 3 160 1.2E-45 T 14-10-2018 IPR010292 Uncharacterised protein family CreA D172_002090 e855673924ef8ccbada38525d764e6b1 161 Pfam PF05981 CreA protein 28 149 1.5E-44 T 14-10-2018 IPR010292 Uncharacterised protein family CreA D172_008440 629cb225c597d5cbf78568165e6c3e63 389 Pfam PF11449 Putative, 10TM heavy-metal exporter 39 388 6.3E-135 T 14-10-2018 IPR021552 Putative, 10TM heavy-metal exporter D172_020275 91a88a590e9397aae696a5b70727dfd6 502 SUPERFAMILY SSF53448 35 308 1.91E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_020275 91a88a590e9397aae696a5b70727dfd6 502 Gene3D G3DSA:3.90.550.10 41 265 3.7E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_020275 91a88a590e9397aae696a5b70727dfd6 502 Pfam PF13641 Glycosyltransferase like family 2 51 279 1.1E-27 T 14-10-2018 D172_015010 d20a74f063db2ddbad9a7521ff93975b 280 PIRSF PIRSF006232 1 280 9.8E-82 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 D172_015010 d20a74f063db2ddbad9a7521ff93975b 280 SUPERFAMILY SSF51182 4 279 4.05E-73 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily D172_015010 d20a74f063db2ddbad9a7521ff93975b 280 Pfam PF02678 Pirin 29 118 1.2E-31 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 D172_015010 d20a74f063db2ddbad9a7521ff93975b 280 Pfam PF05726 Pirin C-terminal cupin domain 178 278 9.6E-26 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 D172_015010 d20a74f063db2ddbad9a7521ff93975b 280 Gene3D G3DSA:2.60.120.10 140 247 2.7E-79 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_015010 d20a74f063db2ddbad9a7521ff93975b 280 Gene3D G3DSA:2.60.120.10 14 274 2.7E-79 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_020415 5e61d13e2c41537354343bde00930895 193 Pfam PF03167 Uracil DNA glycosylase superfamily 29 183 2.9E-29 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D172_020415 5e61d13e2c41537354343bde00930895 193 SUPERFAMILY SSF52141 4 191 5.56E-59 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D172_020415 5e61d13e2c41537354343bde00930895 193 Gene3D G3DSA:3.40.470.10 1 193 2.7E-76 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D172_020415 5e61d13e2c41537354343bde00930895 193 SMART SM00987 27 184 2.8E-34 T 14-10-2018 D172_020415 5e61d13e2c41537354343bde00930895 193 SMART SM00986 27 184 2.8E-34 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 D172_003170 98a118142fa3ed43188519737e3cb069 181 SMART SM00479 7 180 7.0E-19 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D172_003170 98a118142fa3ed43188519737e3cb069 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 41.996 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 D172_003170 98a118142fa3ed43188519737e3cb069 181 Pfam PF00929 Exonuclease 9 168 4.7E-37 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D172_003170 98a118142fa3ed43188519737e3cb069 181 SUPERFAMILY SSF53098 2 180 1.31E-47 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_003170 98a118142fa3ed43188519737e3cb069 181 Gene3D G3DSA:3.30.420.10 1 181 1.6E-73 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_011625 084e135270c91536fdb2e471c1ab4fea 910 SMART SM00710 627 657 1500.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_011625 084e135270c91536fdb2e471c1ab4fea 910 SMART SM00710 542 569 8900.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_011625 084e135270c91536fdb2e471c1ab4fea 910 SMART SM00710 662 684 3600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_011625 084e135270c91536fdb2e471c1ab4fea 910 SMART SM00710 605 626 1.1 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_011625 084e135270c91536fdb2e471c1ab4fea 910 SMART SM00710 708 729 7500.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat D172_011625 084e135270c91536fdb2e471c1ab4fea 910 Gene3D G3DSA:2.60.40.2700 201 285 1.3E-5 T 14-10-2018 D172_011625 084e135270c91536fdb2e471c1ab4fea 910 SUPERFAMILY SSF51126 388 728 2.57E-31 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor D172_011625 084e135270c91536fdb2e471c1ab4fea 910 Gene3D G3DSA:2.160.20.10 387 804 3.1E-46 T 14-10-2018 IPR012334 Pectin lyase fold D172_007370 a6c77948ea0ea0051513220ec7a60b25 234 SUPERFAMILY SSF52540 24 204 1.0E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_007370 a6c77948ea0ea0051513220ec7a60b25 234 Gene3D G3DSA:3.40.50.300 11 196 8.0E-16 T 14-10-2018 D172_013285 b0454b49189634831b1c56fbe9afbb93 786 Gene3D G3DSA:3.30.750.140 685 780 6.1E-7 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily D172_013285 b0454b49189634831b1c56fbe9afbb93 786 Pfam PF02120 Flagellar hook-length control protein FliK 697 773 1.7E-10 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal D172_007400 99c86a4f6859cdf1302c0b82f680a23d 132 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 33 117 8.9E-16 T 14-10-2018 IPR031982 Type IV minor pilin ComP D172_007400 99c86a4f6859cdf1302c0b82f680a23d 132 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 6.5E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_007400 99c86a4f6859cdf1302c0b82f680a23d 132 SUPERFAMILY SSF54523 12 125 2.83E-21 T 14-10-2018 D172_007400 99c86a4f6859cdf1302c0b82f680a23d 132 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 27 7.2E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_007400 99c86a4f6859cdf1302c0b82f680a23d 132 Gene3D G3DSA:3.30.700.10 12 132 2.5E-22 T 14-10-2018 D172_020015 f1f5236c4fe1c2d862297d7dec0f3229 172 Pfam PF14024 Protein of unknown function (DUF4240) 5 130 3.1E-31 T 14-10-2018 IPR025334 Domain of unknown function (DUF4240 D172_000350 eec21e14a303f523f07608d19d7eb1c9 88 SUPERFAMILY SSF143422 1 71 8.63E-16 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D172_000350 eec21e14a303f523f07608d19d7eb1c9 88 Gene3D G3DSA:3.30.70.1290 1 87 1.4E-19 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D172_000350 eec21e14a303f523f07608d19d7eb1c9 88 Pfam PF01797 Transposase IS200 like 1 67 1.2E-8 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D172_016940 eab099f63d10f044cbe2dea0e0f9afd1 110 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 37 55 5.9E-13 T 14-10-2018 D172_016940 eab099f63d10f044cbe2dea0e0f9afd1 110 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 18 37 5.9E-13 T 14-10-2018 D172_016940 eab099f63d10f044cbe2dea0e0f9afd1 110 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 1 77 3.3E-27 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 D172_016940 eab099f63d10f044cbe2dea0e0f9afd1 110 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 106 13.598 T 14-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 D172_016940 eab099f63d10f044cbe2dea0e0f9afd1 110 Pfam PF02416 mttA/Hcf106 family 1 27 1.8E-4 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 D172_010235 abb1918c99b0762088d6dda5b7ee112c 850 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 436 650 6.7E-33 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 D172_010235 abb1918c99b0762088d6dda5b7ee112c 850 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 71 395 7.3E-84 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_010235 abb1918c99b0762088d6dda5b7ee112c 850 SUPERFAMILY SSF52279 436 650 9.55E-45 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 D172_010235 abb1918c99b0762088d6dda5b7ee112c 850 PRINTS PR00133 Glycosyl hydrolase family 3 signature 207 223 1.8E-20 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_010235 abb1918c99b0762088d6dda5b7ee112c 850 PRINTS PR00133 Glycosyl hydrolase family 3 signature 317 335 1.8E-20 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_010235 abb1918c99b0762088d6dda5b7ee112c 850 PRINTS PR00133 Glycosyl hydrolase family 3 signature 137 153 1.8E-20 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_010235 abb1918c99b0762088d6dda5b7ee112c 850 PRINTS PR00133 Glycosyl hydrolase family 3 signature 247 263 1.8E-20 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_010235 abb1918c99b0762088d6dda5b7ee112c 850 PRINTS PR00133 Glycosyl hydrolase family 3 signature 161 180 1.8E-20 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 D172_010235 abb1918c99b0762088d6dda5b7ee112c 850 Gene3D G3DSA:2.60.120.430 671 850 3.3E-19 T 14-10-2018 D172_010235 abb1918c99b0762088d6dda5b7ee112c 850 Gene3D G3DSA:3.20.20.300 56 419 6.6E-134 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 D172_010235 abb1918c99b0762088d6dda5b7ee112c 850 Gene3D G3DSA:3.40.50.1700 421 652 1.0E-68 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 D172_010235 abb1918c99b0762088d6dda5b7ee112c 850 SUPERFAMILY SSF51445 54 435 4.95E-108 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_008830 94d9005dcb088d2ae478807acf64a82d 143 Gene3D G3DSA:3.10.129.10 3 139 6.8E-38 T 14-10-2018 D172_008830 94d9005dcb088d2ae478807acf64a82d 143 Pfam PF03061 Thioesterase superfamily 33 105 1.8E-13 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 D172_008830 94d9005dcb088d2ae478807acf64a82d 143 SUPERFAMILY SSF54637 13 133 1.32E-33 T 14-10-2018 IPR029069 HotDog domain superfamily D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 Pfam PF03924 CHASE domain 253 436 1.1E-32 T 14-10-2018 IPR006189 CHASE domain D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 Gene3D G3DSA:3.30.565.10 590 749 6.7E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 SUPERFAMILY SSF47384 511 592 1.06E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 Pfam PF00072 Response regulator receiver domain 777 886 2.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 Pfam PF00512 His Kinase A (phospho-acceptor) domain 527 591 6.4E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 Gene3D G3DSA:3.30.450.350 254 463 6.4E-22 T 14-10-2018 D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 Gene3D G3DSA:3.40.50.12740 773 894 7.4E-38 T 14-10-2018 D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 638 748 5.4E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 SMART SM01079 250 438 2.5E-41 T 14-10-2018 IPR006189 CHASE domain D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 SMART SM00387 638 749 3.1E-41 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 SUPERFAMILY SSF55874 580 747 6.68E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 SMART SM00448 774 887 2.2E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 SUPERFAMILY SSF52172 772 892 7.4E-36 T 14-10-2018 IPR011006 CheY-like superfamily D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 Gene3D G3DSA:1.10.287.130 494 589 3.2E-22 T 14-10-2018 D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 SMART SM00388 526 591 2.8E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 709 727 2.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 733 746 2.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 674 688 2.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 PRINTS PR00344 Bacterial sensor protein C-terminal signature 692 702 2.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_000795 f3602a1274664c6c5ce90386bc8ca6f9 894 Pfam PF05231 MASE1 9 183 2.3E-20 T 14-10-2018 IPR007895 MASE1 D172_017550 92dcd2b188305d441f4a16fe7ee4dbe1 265 SMART SM00331 12 240 7.9E-28 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D172_017550 92dcd2b188305d441f4a16fe7ee4dbe1 265 Gene3D G3DSA:3.60.40.10 3 244 3.9E-59 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D172_017550 92dcd2b188305d441f4a16fe7ee4dbe1 265 SMART SM00332 3 238 6.3E-18 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D172_017550 92dcd2b188305d441f4a16fe7ee4dbe1 265 SUPERFAMILY SSF81606 8 241 1.57E-58 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D172_017550 92dcd2b188305d441f4a16fe7ee4dbe1 265 Pfam PF13672 Protein phosphatase 2C 18 202 2.2E-14 T 14-10-2018 D172_020030 1f11edf5417fac2f306d1fed279f0cbe 137 SUPERFAMILY SSF51306 21 124 2.09E-21 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily D172_020030 1f11edf5417fac2f306d1fed279f0cbe 137 Pfam PF00717 Peptidase S24-like 46 88 5.4E-8 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D172_020030 1f11edf5417fac2f306d1fed279f0cbe 137 Gene3D G3DSA:2.10.109.10 14 127 1.2E-29 T 14-10-2018 D172_012900 d1b1f03e5d4ad903686eafa49d2ee213 1888 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1844 1887 5.1E-15 T 14-10-2018 IPR020011 Motility protein FimV, C-terminal D172_012900 d1b1f03e5d4ad903686eafa49d2ee213 1888 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 49 122 1.0E-29 T 14-10-2018 IPR020012 Motility protein FimV, N-terminal D172_020510 3b12a0b933ba948b15f58b4568e0bca6 815 Pfam PF01433 Peptidase family M1 domain 371 583 5.7E-15 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_020510 3b12a0b933ba948b15f58b4568e0bca6 815 SUPERFAMILY SSF55486 368 589 4.83E-40 T 14-10-2018 D172_020510 3b12a0b933ba948b15f58b4568e0bca6 815 Gene3D G3DSA:1.10.390.60 361 587 3.1E-30 T 14-10-2018 D172_004215 85ef44606b1aae77671a6dcea0177548 78 Pfam PF13202 EF hand 56 72 0.054 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_004215 85ef44606b1aae77671a6dcea0177548 78 Pfam PF13202 EF hand 27 45 3.5E-4 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_004215 85ef44606b1aae77671a6dcea0177548 78 ProSitePatterns PS00018 EF-hand calcium-binding domain. 60 72 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_004215 85ef44606b1aae77671a6dcea0177548 78 Gene3D G3DSA:1.10.238.10 16 78 1.7E-9 T 14-10-2018 D172_004215 85ef44606b1aae77671a6dcea0177548 78 SUPERFAMILY SSF47473 12 74 9.72E-10 T 14-10-2018 IPR011992 EF-hand domain pair D172_008295 ade1725d49ba6d9ff4c2aba95ee92a00 65 SUPERFAMILY SSF158997 1 56 2.75E-19 T 14-10-2018 D172_008295 ade1725d49ba6d9ff4c2aba95ee92a00 65 Pfam PF03966 Trm112p-like protein 5 42 8.5E-7 T 14-10-2018 IPR005651 Trm112-like D172_008295 ade1725d49ba6d9ff4c2aba95ee92a00 65 Gene3D G3DSA:2.20.25.10 10 65 4.9E-23 T 14-10-2018 D172_008295 ade1725d49ba6d9ff4c2aba95ee92a00 65 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 3 56 25.733 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 D172_004630 3deeab33b548110b050a9cae5147bfc6 212 SUPERFAMILY SSF53335 12 209 5.88E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_004630 3deeab33b548110b050a9cae5147bfc6 212 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 9 207 2.0E-63 T 14-10-2018 D172_004630 3deeab33b548110b050a9cae5147bfc6 212 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 4 212 37.0 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 D172_004630 3deeab33b548110b050a9cae5147bfc6 212 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 134 149 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 D172_004630 3deeab33b548110b050a9cae5147bfc6 212 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 8 209 5.6E-73 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 D172_004630 3deeab33b548110b050a9cae5147bfc6 212 Gene3D G3DSA:3.40.50.150 2 210 1.2E-69 T 14-10-2018 D172_009950 35cc6ec799f622fbc3e1aad0f994cf95 128 Gene3D G3DSA:3.30.2130.10 2 128 1.6E-38 T 14-10-2018 D172_009950 35cc6ec799f622fbc3e1aad0f994cf95 128 SUPERFAMILY SSF55021 61 125 4.58E-18 T 14-10-2018 D172_009950 35cc6ec799f622fbc3e1aad0f994cf95 128 PIRSF PIRSF008459 2 128 2.5E-39 T 14-10-2018 IPR016540 Uncharacterised conserved protein UCP008459 D172_009950 35cc6ec799f622fbc3e1aad0f994cf95 128 SUPERFAMILY SSF55021 1 57 8.39E-14 T 14-10-2018 D172_009950 35cc6ec799f622fbc3e1aad0f994cf95 128 Pfam PF13840 ACT domain 58 119 1.1E-20 T 14-10-2018 IPR027795 CASTOR, ACT domain D172_012855 40c701c1aea6d1e6594b86e85eb09434 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 244 1.2E-16 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D172_012855 40c701c1aea6d1e6594b86e85eb09434 261 Gene3D G3DSA:3.40.190.10 28 243 3.2E-22 T 14-10-2018 D172_012855 40c701c1aea6d1e6594b86e85eb09434 261 Gene3D G3DSA:3.40.190.10 104 202 3.2E-22 T 14-10-2018 D172_012855 40c701c1aea6d1e6594b86e85eb09434 261 SUPERFAMILY SSF53850 25 244 4.34E-26 T 14-10-2018 D172_019255 51b9966bc18314164077ee543def6552 95 Gene3D G3DSA:3.30.70.100 1 94 6.7E-23 T 14-10-2018 D172_019255 51b9966bc18314164077ee543def6552 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 2.3E-16 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain D172_019255 51b9966bc18314164077ee543def6552 95 SUPERFAMILY SSF54909 1 86 6.19E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel D172_007915 536551e81fd074baa89aa8bca111e8e4 208 Gene3D G3DSA:2.50.20.10 22 205 1.5E-43 T 14-10-2018 D172_007915 536551e81fd074baa89aa8bca111e8e4 208 SUPERFAMILY SSF89392 25 204 1.33E-42 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX D172_007915 536551e81fd074baa89aa8bca111e8e4 208 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 194 4.6E-36 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like D172_007915 536551e81fd074baa89aa8bca111e8e4 208 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 8 204 25.886 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 D172_007915 536551e81fd074baa89aa8bca111e8e4 208 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 205 2.1E-41 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 D172_007655 b664b60a6f052cc9f5f4d7b3e93a6cc1 808 Gene3D G3DSA:3.20.20.80 214 584 3.0E-39 T 14-10-2018 D172_007655 b664b60a6f052cc9f5f4d7b3e93a6cc1 808 Gene3D G3DSA:3.40.50.880 596 782 5.9E-7 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_007655 b664b60a6f052cc9f5f4d7b3e93a6cc1 808 SUPERFAMILY SSF51445 244 416 8.42E-8 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_006290 2eca59545f0646b54e5e94a2a6413874 464 SMART SM00490 257 338 9.1E-27 T 14-10-2018 IPR001650 Helicase, C-terminal D172_006290 2eca59545f0646b54e5e94a2a6413874 464 SMART SM00487 20 221 3.9E-60 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_006290 2eca59545f0646b54e5e94a2a6413874 464 Gene3D G3DSA:3.40.50.300 1 217 6.1E-77 T 14-10-2018 D172_006290 2eca59545f0646b54e5e94a2a6413874 464 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 461 50.228 T 14-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 D172_006290 2eca59545f0646b54e5e94a2a6413874 464 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D172_006290 2eca59545f0646b54e5e94a2a6413874 464 Pfam PF00271 Helicase conserved C-terminal domain 233 338 5.1E-25 T 14-10-2018 IPR001650 Helicase, C-terminal D172_006290 2eca59545f0646b54e5e94a2a6413874 464 Pfam PF00270 DEAD/DEAH box helicase 25 193 3.0E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D172_006290 2eca59545f0646b54e5e94a2a6413874 464 Gene3D G3DSA:3.40.50.300 218 415 1.5E-43 T 14-10-2018 D172_006290 2eca59545f0646b54e5e94a2a6413874 464 SUPERFAMILY SSF52540 73 357 2.37E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_011055 a9c374f4417ec6ca0d17d5c0348ec3fb 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 36.855 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 D172_011055 a9c374f4417ec6ca0d17d5c0348ec3fb 181 Pfam PF00156 Phosphoribosyl transferase domain 38 158 1.1E-13 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 D172_011055 a9c374f4417ec6ca0d17d5c0348ec3fb 181 Gene3D G3DSA:3.40.50.2020 2 181 4.7E-63 T 14-10-2018 D172_011055 a9c374f4417ec6ca0d17d5c0348ec3fb 181 SUPERFAMILY SSF53271 12 177 1.84E-50 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like D172_011055 a9c374f4417ec6ca0d17d5c0348ec3fb 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 1.9E-67 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 D172_018415 42d9535fb2d853931193fc79f8b32bea 363 Pfam PF04986 Putative transposase 138 302 3.4E-48 T 14-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 D172_018415 42d9535fb2d853931193fc79f8b32bea 363 Pfam PF14319 Transposase zinc-binding domain 8 114 1.5E-33 T 14-10-2018 IPR026889 Transposase zinc-binding domain D172_014835 622c0636a256c2c078db5243af2c1e3d 405 Gene3D G3DSA:1.10.287.950 75 405 8.0E-52 T 14-10-2018 D172_014835 622c0636a256c2c078db5243af2c1e3d 405 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 222 370 7.2E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_014835 622c0636a256c2c078db5243af2c1e3d 405 SUPERFAMILY SSF58104 96 403 3.31E-51 T 14-10-2018 D172_014835 622c0636a256c2c078db5243af2c1e3d 405 SMART SM00283 143 404 2.0E-27 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_004325 62877332fb56670f614f529185b87313 293 Pfam PF02517 CAAX protease self-immunity 187 279 3.8E-17 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 D172_018390 c31d17d446943e8b56de3cbdd4f4a20e 256 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 58 206 1.4E-14 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain D172_018390 c31d17d446943e8b56de3cbdd4f4a20e 256 SUPERFAMILY SSF52266 25 248 2.5E-45 T 14-10-2018 D172_018390 c31d17d446943e8b56de3cbdd4f4a20e 256 Gene3D G3DSA:3.40.50.1110 24 249 1.1E-63 T 14-10-2018 IPR036514 SGNH hydrolase superfamily D172_006475 3c7145f8f284d64a803d22b8c9c9d340 500 Pfam PF01235 Sodium:alanine symporter family 50 471 1.4E-140 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_006475 3c7145f8f284d64a803d22b8c9c9d340 500 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 451 1.7E-128 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_006475 3c7145f8f284d64a803d22b8c9c9d340 500 PRINTS PR00175 Sodium/alanine symporter signature 86 108 1.4E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_006475 3c7145f8f284d64a803d22b8c9c9d340 500 PRINTS PR00175 Sodium/alanine symporter signature 366 388 1.4E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_006475 3c7145f8f284d64a803d22b8c9c9d340 500 PRINTS PR00175 Sodium/alanine symporter signature 189 207 1.4E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_006475 3c7145f8f284d64a803d22b8c9c9d340 500 PRINTS PR00175 Sodium/alanine symporter signature 429 449 1.4E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_006475 3c7145f8f284d64a803d22b8c9c9d340 500 PRINTS PR00175 Sodium/alanine symporter signature 304 322 1.4E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_006475 3c7145f8f284d64a803d22b8c9c9d340 500 PRINTS PR00175 Sodium/alanine symporter signature 217 236 1.4E-53 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_006475 3c7145f8f284d64a803d22b8c9c9d340 500 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 D172_003385 6b19b73eee51e1b4e9cb28aaf90da5dc 183 Gene3D G3DSA:3.40.30.10 49 169 2.7E-22 T 14-10-2018 D172_003385 6b19b73eee51e1b4e9cb28aaf90da5dc 183 SUPERFAMILY SSF52833 48 173 1.66E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_003385 6b19b73eee51e1b4e9cb28aaf90da5dc 183 Pfam PF00578 AhpC/TSA family 53 149 4.5E-12 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D172_011270 3d24e12c567b29e7e1a0309bfb5c3d16 126 SUPERFAMILY SSF52172 5 125 4.98E-34 T 14-10-2018 IPR011006 CheY-like superfamily D172_011270 3d24e12c567b29e7e1a0309bfb5c3d16 126 Pfam PF00072 Response regulator receiver domain 13 123 8.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_011270 3d24e12c567b29e7e1a0309bfb5c3d16 126 SMART SM00448 10 122 8.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_011270 3d24e12c567b29e7e1a0309bfb5c3d16 126 Gene3D G3DSA:3.40.50.12740 9 126 8.1E-38 T 14-10-2018 D172_003655 6626726363d0db78145c887c566a57f6 534 SUPERFAMILY SSF47384 294 379 3.73E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_003655 6626726363d0db78145c887c566a57f6 534 SMART SM00387 425 534 3.4E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_003655 6626726363d0db78145c887c566a57f6 534 Pfam PF00512 His Kinase A (phospho-acceptor) domain 299 374 1.8E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_003655 6626726363d0db78145c887c566a57f6 534 SUPERFAMILY SSF55874 387 534 4.85E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_003655 6626726363d0db78145c887c566a57f6 534 Gene3D G3DSA:1.10.287.130 276 377 3.7E-18 T 14-10-2018 D172_003655 6626726363d0db78145c887c566a57f6 534 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 534 8.3E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_003655 6626726363d0db78145c887c566a57f6 534 Gene3D G3DSA:3.30.565.10 384 534 1.1E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_003655 6626726363d0db78145c887c566a57f6 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 493 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_003655 6626726363d0db78145c887c566a57f6 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 479 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_003655 6626726363d0db78145c887c566a57f6 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 514 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_003655 6626726363d0db78145c887c566a57f6 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 1.5E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_003655 6626726363d0db78145c887c566a57f6 534 SMART SM00304 190 243 1.7E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_013500 f9c503427acf16b5bcbd70788b65dacb 671 SUPERFAMILY SSF64518 120 435 1.83E-8 T 14-10-2018 D172_013500 f9c503427acf16b5bcbd70788b65dacb 671 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 340 2.0E-52 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 D172_013500 f9c503427acf16b5bcbd70788b65dacb 671 SUPERFAMILY SSF64518 361 668 1.96E-23 T 14-10-2018 D172_013500 f9c503427acf16b5bcbd70788b65dacb 671 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 627 668 7.9E-7 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D172_003100 7769ee412d726140adeb445217057fd5 337 TIGRFAM TIGR00238 TIGR00238: KamA family protein 11 325 1.2E-110 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase D172_003100 7769ee412d726140adeb445217057fd5 337 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 13 332 5.1E-145 T 14-10-2018 IPR022462 Lysine-2,3-aminomutase-like D172_003100 7769ee412d726140adeb445217057fd5 337 Pfam PF13353 4Fe-4S single cluster domain 110 180 7.4E-8 T 14-10-2018 D172_003100 7769ee412d726140adeb445217057fd5 337 Gene3D G3DSA:3.20.20.70 48 331 3.0E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_003100 7769ee412d726140adeb445217057fd5 337 SUPERFAMILY SSF102114 99 321 6.67E-26 T 14-10-2018 D172_003100 7769ee412d726140adeb445217057fd5 337 PIRSF PIRSF004911 1 337 5.2E-108 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase D172_003100 7769ee412d726140adeb445217057fd5 337 Pfam PF04055 Radical SAM superfamily 115 274 4.6E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D172_001355 82e666efdad6a7e6c90c7c34aa229aa1 313 Gene3D G3DSA:3.30.420.310 87 312 4.7E-62 T 14-10-2018 D172_001355 82e666efdad6a7e6c90c7c34aa229aa1 313 Gene3D G3DSA:3.30.420.300 2 86 4.4E-15 T 14-10-2018 D172_001355 82e666efdad6a7e6c90c7c34aa229aa1 313 Pfam PF05035 2-keto-3-deoxy-galactonokinase 11 306 5.2E-79 T 14-10-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 D172_001180 8a1d1341c60f9aef84a62307323d07f5 242 SUPERFAMILY SSF49344 21 239 3.57E-36 T 14-10-2018 D172_001180 8a1d1341c60f9aef84a62307323d07f5 242 Gene3D G3DSA:2.60.40.1190 20 239 7.5E-37 T 14-10-2018 D172_001180 8a1d1341c60f9aef84a62307323d07f5 242 Pfam PF06452 Carbohydrate family 9 binding domain-like 30 238 1.0E-56 T 14-10-2018 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6717|MetaCyc: PWY-6784 D172_001180 8a1d1341c60f9aef84a62307323d07f5 242 ProDom PD004647 DEGRADATION HYDROLASE GLYCOSIDASE XYLAN A XYLANASE PRECURSOR SIGNAL REPEAT 14- 26 109 5.0E-6 T 14-10-2018 D172_018885 8a1f10d1a84382fd8b041830aae6532a 472 SUPERFAMILY SSF56954 3 461 8.5E-112 T 14-10-2018 D172_018885 8a1f10d1a84382fd8b041830aae6532a 472 Gene3D G3DSA:2.20.200.10 96 349 9.4E-137 T 14-10-2018 D172_018885 8a1f10d1a84382fd8b041830aae6532a 472 Gene3D G3DSA:1.20.1600.10 50 460 9.4E-137 T 14-10-2018 D172_018885 8a1f10d1a84382fd8b041830aae6532a 472 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 460 2.9E-119 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 D172_018885 8a1f10d1a84382fd8b041830aae6532a 472 Pfam PF02321 Outer membrane efflux protein 279 458 4.0E-33 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D172_018885 8a1f10d1a84382fd8b041830aae6532a 472 Pfam PF02321 Outer membrane efflux protein 59 249 4.1E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D172_002950 9238bde52bf4f0231e77a8f092ca0b2a 408 SMART SM00487 20 222 2.2E-57 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_002950 9238bde52bf4f0231e77a8f092ca0b2a 408 Gene3D G3DSA:3.40.50.300 1 218 6.1E-73 T 14-10-2018 D172_002950 9238bde52bf4f0231e77a8f092ca0b2a 408 SUPERFAMILY SSF52540 75 361 1.2E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_002950 9238bde52bf4f0231e77a8f092ca0b2a 408 Pfam PF00270 DEAD/DEAH box helicase 25 195 1.1E-44 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D172_002950 9238bde52bf4f0231e77a8f092ca0b2a 408 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 1 408 49.774 T 14-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 D172_002950 9238bde52bf4f0231e77a8f092ca0b2a 408 Pfam PF00271 Helicase conserved C-terminal domain 232 340 4.7E-31 T 14-10-2018 IPR001650 Helicase, C-terminal D172_002950 9238bde52bf4f0231e77a8f092ca0b2a 408 SMART SM00490 259 340 2.0E-31 T 14-10-2018 IPR001650 Helicase, C-terminal D172_002950 9238bde52bf4f0231e77a8f092ca0b2a 408 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D172_002950 9238bde52bf4f0231e77a8f092ca0b2a 408 Gene3D G3DSA:3.40.50.300 219 408 9.5E-50 T 14-10-2018 D172_012240 3dd52bca710aefecca2bfa6f80247b85 71 Gene3D G3DSA:1.10.238.10 2 71 1.1E-11 T 14-10-2018 D172_012240 3dd52bca710aefecca2bfa6f80247b85 71 ProSitePatterns PS00018 EF-hand calcium-binding domain. 55 67 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_012240 3dd52bca710aefecca2bfa6f80247b85 71 Pfam PF13202 EF hand 23 40 1.4E-5 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_012240 3dd52bca710aefecca2bfa6f80247b85 71 Pfam PF13202 EF hand 47 70 7.8E-7 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_012240 3dd52bca710aefecca2bfa6f80247b85 71 SUPERFAMILY SSF47473 17 70 1.13E-11 T 14-10-2018 IPR011992 EF-hand domain pair D172_004940 80954daf8413d48478e1ea15b1007c2c 70 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 6.6E-20 T 14-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM D172_020880 be035003c3c608f591b6ba3e75fbba2b 66 Pfam PF03889 Domain of unknown function 20 56 8.9E-20 T 14-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 D172_017345 353585811c074f41ab30b66ef8f98f9c 437 SUPERFAMILY SSF55031 220 348 1.92E-6 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain D172_017345 353585811c074f41ab30b66ef8f98f9c 437 SUPERFAMILY SSF53187 31 435 1.29E-38 T 14-10-2018 D172_017345 353585811c074f41ab30b66ef8f98f9c 437 Gene3D G3DSA:3.30.70.360 220 345 6.4E-91 T 14-10-2018 D172_017345 353585811c074f41ab30b66ef8f98f9c 437 Pfam PF01546 Peptidase family M20/M25/M40 112 431 6.4E-19 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 D172_017345 353585811c074f41ab30b66ef8f98f9c 437 Gene3D G3DSA:3.40.630.10 47 422 6.4E-91 T 14-10-2018 D172_017345 353585811c074f41ab30b66ef8f98f9c 437 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 110 119 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 D172_017345 353585811c074f41ab30b66ef8f98f9c 437 Pfam PF07687 Peptidase dimerisation domain 218 332 1.3E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain D172_002540 6ca36288d6b9547cde6db2560f018af5 671 Gene3D G3DSA:1.10.287.950 341 671 6.9E-75 T 14-10-2018 D172_002540 6ca36288d6b9547cde6db2560f018af5 671 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 472 635 2.6E-42 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_002540 6ca36288d6b9547cde6db2560f018af5 671 SUPERFAMILY SSF58104 362 671 2.22E-74 T 14-10-2018 D172_002540 6ca36288d6b9547cde6db2560f018af5 671 SMART SM00283 409 670 3.0E-69 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_002540 6ca36288d6b9547cde6db2560f018af5 671 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 99 1.1E-7 T 14-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain D172_002540 6ca36288d6b9547cde6db2560f018af5 671 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 536 565 2.1E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_002540 6ca36288d6b9547cde6db2560f018af5 671 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 507 534 2.1E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_002540 6ca36288d6b9547cde6db2560f018af5 671 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 430 459 2.1E-22 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 D172_002540 6ca36288d6b9547cde6db2560f018af5 671 SMART SM00304 342 394 2.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_002540 6ca36288d6b9547cde6db2560f018af5 671 SMART SM00304 422 496 110.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_014355 b183aa9b750515dc2fc58aba1e80f6b2 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.3E-71 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 D172_014355 b183aa9b750515dc2fc58aba1e80f6b2 149 Pfam PF03477 ATP cone domain 50 136 3.8E-18 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 D172_014355 b183aa9b750515dc2fc58aba1e80f6b2 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 88.538 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 D172_012405 2ff2b1226bebb48d42f2957d099c9f08 319 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 219 5.9E-75 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_012405 2ff2b1226bebb48d42f2957d099c9f08 319 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 35 181 1.1E-50 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 D172_012405 2ff2b1226bebb48d42f2957d099c9f08 319 Gene3D G3DSA:2.30.130.10 251 310 3.0E-5 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 D172_012405 2ff2b1226bebb48d42f2957d099c9f08 319 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 182 249 9.0E-23 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 D172_012405 2ff2b1226bebb48d42f2957d099c9f08 319 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 17.177 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_012405 2ff2b1226bebb48d42f2957d099c9f08 319 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 253 306 9.0E-10 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_012405 2ff2b1226bebb48d42f2957d099c9f08 319 Gene3D G3DSA:3.30.2350.10 1 250 3.2E-85 T 14-10-2018 D172_012405 2ff2b1226bebb48d42f2957d099c9f08 319 SUPERFAMILY SSF55120 10 250 2.71E-75 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_020965 016f7320beed3bcb2b2b309aa37e5a0c 152 Gene3D G3DSA:3.40.30.10 33 148 2.7E-8 T 14-10-2018 D172_020965 016f7320beed3bcb2b2b309aa37e5a0c 152 SUPERFAMILY SSF52833 47 138 1.93E-9 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_004225 4eb9197fc30570cbb493ad8de0b3dc90 75 SUPERFAMILY SSF47473 26 73 6.18E-7 T 14-10-2018 IPR011992 EF-hand domain pair D172_004225 4eb9197fc30570cbb493ad8de0b3dc90 75 Gene3D G3DSA:1.10.238.10 16 74 1.3E-8 T 14-10-2018 D172_014365 afbefaf72b8eb3a4b7d9c085b3404ead 427 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 D172_014365 afbefaf72b8eb3a4b7d9c085b3404ead 427 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 91 361 1.9E-20 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D172_014365 afbefaf72b8eb3a4b7d9c085b3404ead 427 Gene3D G3DSA:3.40.50.1100 84 392 1.8E-131 T 14-10-2018 D172_014365 afbefaf72b8eb3a4b7d9c085b3404ead 427 Gene3D G3DSA:3.90.1380.10 1 79 1.0E-27 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily D172_014365 afbefaf72b8eb3a4b7d9c085b3404ead 427 TIGRFAM TIGR00260 thrC: threonine synthase 51 393 1.8E-99 T 14-10-2018 IPR004450 Threonine synthase-like D172_014365 afbefaf72b8eb3a4b7d9c085b3404ead 427 Pfam PF14821 Threonine synthase N terminus 8 78 1.4E-6 T 14-10-2018 IPR029144 Threonine synthase, N-terminal D172_014365 afbefaf72b8eb3a4b7d9c085b3404ead 427 Gene3D G3DSA:3.40.50.1100 101 399 1.8E-131 T 14-10-2018 D172_014365 afbefaf72b8eb3a4b7d9c085b3404ead 427 SUPERFAMILY SSF53686 1 425 3.93E-122 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D172_001055 d04eaaadf8be1d7f1031cfad29807cd0 274 Gene3D G3DSA:2.40.50.140 1 114 1.1E-50 T 14-10-2018 D172_001055 d04eaaadf8be1d7f1031cfad29807cd0 274 Gene3D G3DSA:4.10.950.10 196 274 5.5E-38 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001055 d04eaaadf8be1d7f1031cfad29807cd0 274 SMART SM01382 124 252 5.4E-95 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 D172_001055 d04eaaadf8be1d7f1031cfad29807cd0 274 PIRSF PIRSF002158 11 274 2.1E-104 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001055 d04eaaadf8be1d7f1031cfad29807cd0 274 Gene3D G3DSA:2.30.30.30 115 195 1.1E-33 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 D172_001055 d04eaaadf8be1d7f1031cfad29807cd0 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_001055 d04eaaadf8be1d7f1031cfad29807cd0 274 SMART SM01383 42 118 8.3E-47 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001055 d04eaaadf8be1d7f1031cfad29807cd0 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.949 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 D172_001055 d04eaaadf8be1d7f1031cfad29807cd0 274 SUPERFAMILY SSF50249 2 125 6.51E-50 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_001055 d04eaaadf8be1d7f1031cfad29807cd0 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.1E-34 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001055 d04eaaadf8be1d7f1031cfad29807cd0 274 SUPERFAMILY SSF50104 126 272 1.81E-62 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily D172_001055 d04eaaadf8be1d7f1031cfad29807cd0 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 273 1.8E-133 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 D172_001055 d04eaaadf8be1d7f1031cfad29807cd0 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.0E-57 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 D172_016325 b93137e5b9d402ada02c1065ae00ef69 62 Pfam PF11127 Protein of unknown function (DUF2892) 8 56 1.5E-10 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 D172_009875 77a2dbb64a255697543a49989319404b 1093 Gene3D G3DSA:2.60.40.10 270 359 5.6E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_009875 77a2dbb64a255697543a49989319404b 1093 Gene3D G3DSA:2.60.40.10 35 136 1.3E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_009875 77a2dbb64a255697543a49989319404b 1093 Gene3D G3DSA:2.60.40.10 711 793 4.2E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_009875 77a2dbb64a255697543a49989319404b 1093 Gene3D G3DSA:2.60.40.10 602 694 2.2E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_009875 77a2dbb64a255697543a49989319404b 1093 SUPERFAMILY SSF49373 62 135 2.46E-9 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments D172_009875 77a2dbb64a255697543a49989319404b 1093 SUPERFAMILY SSF49373 606 686 1.28E-8 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments D172_009875 77a2dbb64a255697543a49989319404b 1093 SUPERFAMILY SSF49373 176 247 8.44E-6 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments D172_009875 77a2dbb64a255697543a49989319404b 1093 SUPERFAMILY SSF49373 282 360 5.69E-12 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments D172_009875 77a2dbb64a255697543a49989319404b 1093 SUPERFAMILY SSF49373 407 481 1.26E-5 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments D172_009875 77a2dbb64a255697543a49989319404b 1093 SMART SM00634 50 137 0.044 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D172_009875 77a2dbb64a255697543a49989319404b 1093 SMART SM00634 273 357 0.011 T 14-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain D172_005115 566eb8aae0690dc63b84e5250857f988 635 Pfam PF08811 Protein of unknown function (DUF1800) 136 632 2.7E-84 T 14-10-2018 IPR014917 Protein of unknown function DUF1800 D172_005115 566eb8aae0690dc63b84e5250857f988 635 Gene3D G3DSA:2.60.40.10 27 124 4.6E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_014640 dd78510a120eee4ea2e52f9a88f2026f 254 SMART SM00062 23 249 6.4E-4 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D172_014640 dd78510a120eee4ea2e52f9a88f2026f 254 Gene3D G3DSA:3.40.190.10 107 206 3.8E-31 T 14-10-2018 D172_014640 dd78510a120eee4ea2e52f9a88f2026f 254 Gene3D G3DSA:3.40.190.10 29 245 3.8E-31 T 14-10-2018 D172_014640 dd78510a120eee4ea2e52f9a88f2026f 254 SUPERFAMILY SSF53850 24 246 2.37E-33 T 14-10-2018 D172_014640 dd78510a120eee4ea2e52f9a88f2026f 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 245 6.7E-24 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D172_012525 dedb0265b34845d43297fe8f0d4e8d5a 482 Pfam PF03572 Peptidase family S41 257 451 1.4E-15 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D172_012525 dedb0265b34845d43297fe8f0d4e8d5a 482 SUPERFAMILY SSF52096 81 460 2.49E-28 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_012525 dedb0265b34845d43297fe8f0d4e8d5a 482 Gene3D G3DSA:3.90.226.10 229 477 3.4E-17 T 14-10-2018 D172_020330 a138ff93793cdc6fb3715d7639978322 294 Pfam PF01564 Spermine/spermidine synthase domain 77 207 8.0E-12 T 14-10-2018 D172_020330 a138ff93793cdc6fb3715d7639978322 294 SUPERFAMILY SSF53335 16 243 1.16E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_020330 a138ff93793cdc6fb3715d7639978322 294 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 3 287 15.287 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 D172_020330 a138ff93793cdc6fb3715d7639978322 294 Gene3D G3DSA:3.40.50.150 31 284 9.7E-53 T 14-10-2018 D172_011655 bcd63c81c7717f1a7c344ab1731c818d 114 PIRSF PIRSF029883 5 114 3.6E-36 T 14-10-2018 IPR025499 Pectin degradation protein KdgF D172_011655 bcd63c81c7717f1a7c344ab1731c818d 114 SUPERFAMILY SSF51182 11 110 4.31E-20 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily D172_011655 bcd63c81c7717f1a7c344ab1731c818d 114 Pfam PF07883 Cupin domain 42 96 4.1E-12 T 14-10-2018 IPR013096 Cupin 2, conserved barrel D172_011655 bcd63c81c7717f1a7c344ab1731c818d 114 Gene3D G3DSA:2.60.120.10 1 114 2.0E-33 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_000855 37136ae023d040c46de5cf6e16748b12 190 SUPERFAMILY SSF46565 125 186 9.68E-9 T 14-10-2018 IPR036869 Chaperone J-domain superfamily D172_000855 37136ae023d040c46de5cf6e16748b12 190 Gene3D G3DSA:1.10.287.110 126 190 4.2E-8 T 14-10-2018 IPR036869 Chaperone J-domain superfamily D172_000855 37136ae023d040c46de5cf6e16748b12 190 Pfam PF12339 DNA-J related protein 3 119 3.7E-26 T 14-10-2018 IPR021059 DnaJ-related protein, N-terminal D172_000855 37136ae023d040c46de5cf6e16748b12 190 SMART SM00271 131 190 0.0044 T 14-10-2018 IPR001623 DnaJ domain D172_013745 f43287725633cee0a9928238e333e9df 595 SUPERFAMILY SSF54980 398 492 3.93E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like D172_013745 f43287725633cee0a9928238e333e9df 595 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site D172_013745 f43287725633cee0a9928238e333e9df 595 Gene3D G3DSA:3.30.70.2570 478 552 6.9E-32 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily D172_013745 f43287725633cee0a9928238e333e9df 595 SUPERFAMILY SSF52540 2 205 9.93E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_013745 f43287725633cee0a9928238e333e9df 595 Hamap MF_00071 Elongation factor 4 [lepA]. 1 595 297.743 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 D172_013745 f43287725633cee0a9928238e333e9df 595 Gene3D G3DSA:3.30.70.870 286 367 9.1E-35 T 14-10-2018 D172_013745 f43287725633cee0a9928238e333e9df 595 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.4E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_013745 f43287725633cee0a9928238e333e9df 595 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.4E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_013745 f43287725633cee0a9928238e333e9df 595 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.4E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_013745 f43287725633cee0a9928238e333e9df 595 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.4E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_013745 f43287725633cee0a9928238e333e9df 595 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.4E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_013745 f43287725633cee0a9928238e333e9df 595 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 177 2.4E-18 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 D172_013745 f43287725633cee0a9928238e333e9df 595 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 3.2E-53 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 D172_013745 f43287725633cee0a9928238e333e9df 595 Pfam PF06421 GTP-binding protein LepA C-terminus 486 592 3.4E-48 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal D172_013745 f43287725633cee0a9928238e333e9df 595 SMART SM00838 397 485 0.0099 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like D172_013745 f43287725633cee0a9928238e333e9df 595 TIGRFAM TIGR01393 lepA: elongation factor 4 2 593 5.8E-296 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 D172_013745 f43287725633cee0a9928238e333e9df 595 SUPERFAMILY SSF54980 292 370 1.08E-17 T 14-10-2018 IPR035647 EF-G domain III/V-like D172_013745 f43287725633cee0a9928238e333e9df 595 Gene3D G3DSA:2.40.30.10 186 283 2.1E-33 T 14-10-2018 D172_013745 f43287725633cee0a9928238e333e9df 595 Gene3D G3DSA:3.30.70.3380 368 477 2.6E-39 T 14-10-2018 D172_013745 f43287725633cee0a9928238e333e9df 595 Gene3D G3DSA:3.40.50.300 1 185 5.0E-72 T 14-10-2018 D172_013745 f43287725633cee0a9928238e333e9df 595 Pfam PF00679 Elongation factor G C-terminus 398 483 3.0E-21 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like D172_013745 f43287725633cee0a9928238e333e9df 595 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.2E-7 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 D172_013745 f43287725633cee0a9928238e333e9df 595 SUPERFAMILY SSF50447 165 288 6.86E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D172_003500 8b7463ca36726f851dacdfafd27186f1 362 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 362 53.05 T 14-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 D172_003500 8b7463ca36726f851dacdfafd27186f1 362 Pfam PF03969 AFG1-like ATPase 1 359 2.1E-149 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 D172_003500 8b7463ca36726f851dacdfafd27186f1 362 Gene3D G3DSA:3.40.50.300 9 186 8.9E-21 T 14-10-2018 D172_003500 8b7463ca36726f851dacdfafd27186f1 362 ProSitePatterns PS00414 Profilin signature. 1 9 - T 14-10-2018 IPR027310 Profilin conserved site GO:0003779 Reactome: R-HSA-376176|Reactome: R-HSA-5663220 D172_003500 8b7463ca36726f851dacdfafd27186f1 362 SUPERFAMILY SSF52540 20 182 7.91E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_011630 9ff628bd355c86703e1a84cfc05f3be0 320 Gene3D G3DSA:3.40.190.80 187 319 6.3E-45 T 14-10-2018 D172_011630 9ff628bd355c86703e1a84cfc05f3be0 320 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 261 273 - T 14-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_011630 9ff628bd355c86703e1a84cfc05f3be0 320 PIRSF PIRSF000904 2 320 5.8E-95 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_011630 9ff628bd355c86703e1a84cfc05f3be0 320 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 13 183 8.1E-47 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_011630 9ff628bd355c86703e1a84cfc05f3be0 320 SUPERFAMILY SSF56655 4 318 1.44E-92 T 14-10-2018 D172_011630 9ff628bd355c86703e1a84cfc05f3be0 320 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 295 320 8.0E-48 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_011630 9ff628bd355c86703e1a84cfc05f3be0 320 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 138 161 8.0E-48 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_011630 9ff628bd355c86703e1a84cfc05f3be0 320 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 169 192 8.0E-48 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_011630 9ff628bd355c86703e1a84cfc05f3be0 320 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 59 85 8.0E-48 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_011630 9ff628bd355c86703e1a84cfc05f3be0 320 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 22 49 8.0E-48 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_011630 9ff628bd355c86703e1a84cfc05f3be0 320 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 195 222 8.0E-48 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_011630 9ff628bd355c86703e1a84cfc05f3be0 320 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 317 38.24 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_011630 9ff628bd355c86703e1a84cfc05f3be0 320 Gene3D G3DSA:3.30.540.10 4 186 9.4E-52 T 14-10-2018 D172_011630 9ff628bd355c86703e1a84cfc05f3be0 320 PIRSF PIRSF500210 2 320 1.2E-96 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 D172_014575 201892733bf7c8cec7f8a1a94229ed70 417 Pfam PF02321 Outer membrane efflux protein 236 408 1.9E-18 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D172_014575 201892733bf7c8cec7f8a1a94229ed70 417 Pfam PF02321 Outer membrane efflux protein 29 208 7.9E-16 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D172_014575 201892733bf7c8cec7f8a1a94229ed70 417 Gene3D G3DSA:1.20.1600.10 18 416 1.4E-45 T 14-10-2018 D172_014575 201892733bf7c8cec7f8a1a94229ed70 417 SUPERFAMILY SSF56954 3 410 1.44E-59 T 14-10-2018 D172_014710 b923ccae7c0fc007dca86866ef56bc55 123 Gene3D G3DSA:1.10.10.10 12 123 3.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_014710 b923ccae7c0fc007dca86866ef56bc55 123 SMART SM00345 19 78 2.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_014710 b923ccae7c0fc007dca86866ef56bc55 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 3.0E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 D172_014710 b923ccae7c0fc007dca86866ef56bc55 123 SUPERFAMILY SSF46785 8 82 5.94E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_004505 bda902df303e0f437433b149f514b1c7 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site D172_004505 bda902df303e0f437433b149f514b1c7 409 Gene3D G3DSA:3.40.50.720 14 312 3.2E-110 T 14-10-2018 D172_004505 bda902df303e0f437433b149f514b1c7 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 1.7E-51 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 D172_004505 bda902df303e0f437433b149f514b1c7 409 Gene3D G3DSA:3.30.70.260 328 408 2.6E-32 T 14-10-2018 D172_004505 bda902df303e0f437433b149f514b1c7 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site D172_004505 bda902df303e0f437433b149f514b1c7 409 SUPERFAMILY SSF55021 333 408 1.62E-18 T 14-10-2018 D172_004505 bda902df303e0f437433b149f514b1c7 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 2.1E-38 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 D172_004505 bda902df303e0f437433b149f514b1c7 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 D172_004505 bda902df303e0f437433b149f514b1c7 409 Gene3D G3DSA:3.40.50.720 109 297 3.2E-110 T 14-10-2018 D172_004505 bda902df303e0f437433b149f514b1c7 409 SUPERFAMILY SSF51735 108 295 5.09E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_004505 bda902df303e0f437433b149f514b1c7 409 SUPERFAMILY SSF52283 8 134 5.29E-49 T 14-10-2018 D172_004505 bda902df303e0f437433b149f514b1c7 409 Pfam PF01842 ACT domain 344 400 3.9E-7 T 14-10-2018 IPR002912 ACT domain D172_009675 0e8205c1613754f0e9bb96b34b13e6e4 170 PRINTS PR01837 MgtC/SapB protein signature 66 88 2.0E-32 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 D172_009675 0e8205c1613754f0e9bb96b34b13e6e4 170 PRINTS PR01837 MgtC/SapB protein signature 20 39 2.0E-32 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 D172_009675 0e8205c1613754f0e9bb96b34b13e6e4 170 PRINTS PR01837 MgtC/SapB protein signature 39 57 2.0E-32 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 D172_009675 0e8205c1613754f0e9bb96b34b13e6e4 170 PRINTS PR01837 MgtC/SapB protein signature 93 117 2.0E-32 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 D172_009675 0e8205c1613754f0e9bb96b34b13e6e4 170 Pfam PF02308 MgtC family 18 138 4.8E-28 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 D172_004385 dcd2f0667ba1b906fd6d4a8f5b91a72e 476 Pfam PF00144 Beta-lactamase 161 459 5.4E-52 T 14-10-2018 IPR001466 Beta-lactamase-related D172_004385 dcd2f0667ba1b906fd6d4a8f5b91a72e 476 Gene3D G3DSA:3.40.710.10 151 473 6.5E-82 T 14-10-2018 D172_004385 dcd2f0667ba1b906fd6d4a8f5b91a72e 476 SUPERFAMILY SSF56601 156 461 7.77E-71 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D172_018565 12aded9edb8ef9e4783ae02bf8245b92 278 Gene3D G3DSA:3.40.1090.10 92 196 1.5E-10 T 14-10-2018 D172_018565 12aded9edb8ef9e4783ae02bf8245b92 278 Gene3D G3DSA:3.40.1090.10 1 84 4.2E-9 T 14-10-2018 D172_018565 12aded9edb8ef9e4783ae02bf8245b92 278 Pfam PF01734 Patatin-like phospholipase 9 172 1.3E-12 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 D172_018565 12aded9edb8ef9e4783ae02bf8245b92 278 SUPERFAMILY SSF52151 4 249 7.32E-36 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D172_004870 b470a6bcd992fb0df2dcd9fdb2d24f86 459 Gene3D G3DSA:1.20.1250.20 12 221 3.2E-12 T 14-10-2018 D172_004870 b470a6bcd992fb0df2dcd9fdb2d24f86 459 SUPERFAMILY SSF103473 10 449 2.49E-35 T 14-10-2018 IPR036259 MFS transporter superfamily D172_004870 b470a6bcd992fb0df2dcd9fdb2d24f86 459 Gene3D G3DSA:1.20.1250.20 254 453 1.5E-10 T 14-10-2018 D172_004870 b470a6bcd992fb0df2dcd9fdb2d24f86 459 Pfam PF07690 Major Facilitator Superfamily 22 350 3.5E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_015965 8ca493c4003ac25b2438e49735dbd205 557 Gene3D G3DSA:3.40.50.10730 141 348 4.5E-260 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D172_015965 8ca493c4003ac25b2438e49735dbd205 557 PIRSF PIRSF001423 1 557 5.0E-297 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D172_015965 8ca493c4003ac25b2438e49735dbd205 557 Pfam PF17392 Urocanase C-terminal domain 351 545 4.2E-94 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D172_015965 8ca493c4003ac25b2438e49735dbd205 557 Gene3D G3DSA:3.40.1770.10 17 541 4.5E-260 T 14-10-2018 D172_015965 8ca493c4003ac25b2438e49735dbd205 557 Pfam PF01175 Urocanase Rossmann-like domain 140 348 2.3E-86 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D172_015965 8ca493c4003ac25b2438e49735dbd205 557 TIGRFAM TIGR01228 hutU: urocanate hydratase 10 553 4.0E-297 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D172_015965 8ca493c4003ac25b2438e49735dbd205 557 Hamap MF_00577 Urocanate hydratase [hutU]. 2 555 49.833 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D172_015965 8ca493c4003ac25b2438e49735dbd205 557 SUPERFAMILY SSF111326 5 554 1.44E-261 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D172_015965 8ca493c4003ac25b2438e49735dbd205 557 Pfam PF17391 Urocanase N-terminal domain 11 137 1.3E-61 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D172_015965 8ca493c4003ac25b2438e49735dbd205 557 ProSitePatterns PS01233 Urocanase signature. 441 456 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D172_018555 35fc95837512773e0796f5378f8280f5 539 Pfam PF03929 PepSY-associated TM region 19 391 2.6E-47 T 14-10-2018 IPR005625 PepSY-associated TM protein D172_000945 c9c925981f6680bda36bc0cbced1e611 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 186 1.4E-14 T 14-10-2018 D172_000945 c9c925981f6680bda36bc0cbced1e611 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 69 185 9.3E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_000945 c9c925981f6680bda36bc0cbced1e611 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 133 149 4.1E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_000945 c9c925981f6680bda36bc0cbced1e611 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 4.1E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_000945 c9c925981f6680bda36bc0cbced1e611 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 171 4.1E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_000945 c9c925981f6680bda36bc0cbced1e611 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 102 115 4.1E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_000945 c9c925981f6680bda36bc0cbced1e611 215 SUPERFAMILY SSF56784 1 214 3.6E-45 T 14-10-2018 IPR036412 HAD-like superfamily D172_000945 c9c925981f6680bda36bc0cbced1e611 215 Gene3D G3DSA:3.40.50.1000 6 203 1.5E-22 T 14-10-2018 IPR023214 HAD superfamily D172_001745 772cdedadce729bcf72106c726248889 292 SUPERFAMILY SSF117892 56 192 1.7E-30 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily D172_001745 772cdedadce729bcf72106c726248889 292 Pfam PF01145 SPFH domain / Band 7 family 22 203 1.9E-34 T 14-10-2018 IPR001107 Band 7 domain D172_001745 772cdedadce729bcf72106c726248889 292 TIGRFAM TIGR01932 hflC: HflC protein 144 287 1.8E-56 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 D172_001745 772cdedadce729bcf72106c726248889 292 TIGRFAM TIGR01932 hflC: HflC protein 1 147 1.2E-48 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 D172_001745 772cdedadce729bcf72106c726248889 292 PIRSF PIRSF005651 1 292 2.5E-97 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 D172_001745 772cdedadce729bcf72106c726248889 292 SMART SM00244 18 187 4.2E-42 T 14-10-2018 IPR001107 Band 7 domain D172_001745 772cdedadce729bcf72106c726248889 292 Gene3D G3DSA:3.30.479.30 53 189 3.7E-22 T 14-10-2018 D172_014240 0ff21e56e3ddbd450c1c26d04b6f3f82 307 Pfam PF04960 Glutaminase 24 307 1.5E-108 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 D172_014240 0ff21e56e3ddbd450c1c26d04b6f3f82 307 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 307 1.1E-124 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 D172_014240 0ff21e56e3ddbd450c1c26d04b6f3f82 307 Gene3D G3DSA:3.40.710.10 2 307 5.0E-107 T 14-10-2018 D172_014240 0ff21e56e3ddbd450c1c26d04b6f3f82 307 Hamap MF_00313 Glutaminase [glsA]. 6 307 44.281 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 D172_014240 0ff21e56e3ddbd450c1c26d04b6f3f82 307 SUPERFAMILY SSF56601 3 307 6.42E-109 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D172_012545 c9a65cbef5cf6e5cbf73acb506b8ace6 657 Pfam PF00999 Sodium/hydrogen exchanger family 11 372 5.5E-65 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 D172_012545 c9a65cbef5cf6e5cbf73acb506b8ace6 657 SUPERFAMILY SSF116726 581 652 6.02E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D172_012545 c9a65cbef5cf6e5cbf73acb506b8ace6 657 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 284 5.6E-74 T 14-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 D172_012545 c9a65cbef5cf6e5cbf73acb506b8ace6 657 Pfam PF02254 TrkA-N domain 408 521 1.5E-21 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 D172_012545 c9a65cbef5cf6e5cbf73acb506b8ace6 657 Gene3D G3DSA:1.20.1530.20 3 383 5.9E-85 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily D172_012545 c9a65cbef5cf6e5cbf73acb506b8ace6 657 SUPERFAMILY SSF51735 405 547 1.77E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_012545 c9a65cbef5cf6e5cbf73acb506b8ace6 657 Gene3D G3DSA:3.30.70.1450 581 654 7.1E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 D172_012545 c9a65cbef5cf6e5cbf73acb506b8ace6 657 Pfam PF02080 TrkA-C domain 589 651 6.3E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 D172_012545 c9a65cbef5cf6e5cbf73acb506b8ace6 657 Gene3D G3DSA:3.40.50.720 403 565 3.0E-36 T 14-10-2018 D172_019720 1292314e09552dd61f66b251cc52f2b4 453 SMART SM00245 227 430 1.6E-6 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D172_019720 1292314e09552dd61f66b251cc52f2b4 453 Pfam PF03572 Peptidase family S41 256 426 3.9E-26 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D172_019720 1292314e09552dd61f66b251cc52f2b4 453 SUPERFAMILY SSF52096 121 451 2.49E-41 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_019720 1292314e09552dd61f66b251cc52f2b4 453 Gene3D G3DSA:3.90.226.10 194 449 1.1E-54 T 14-10-2018 D172_019720 1292314e09552dd61f66b251cc52f2b4 453 Gene3D G3DSA:3.30.750.44 123 408 1.1E-54 T 14-10-2018 D172_015185 4165315cd591ad0cf0937a39ab8b9d60 218 Gene3D G3DSA:2.60.40.420 45 145 1.7E-13 T 14-10-2018 IPR008972 Cupredoxin D172_015185 4165315cd591ad0cf0937a39ab8b9d60 218 SUPERFAMILY SSF49503 57 145 2.38E-17 T 14-10-2018 IPR008972 Cupredoxin D172_002820 2bbc7332f8216eba9f11a924aacb20e7 323 SUPERFAMILY SSF144083 258 320 1.7E-14 T 14-10-2018 D172_002820 2bbc7332f8216eba9f11a924aacb20e7 323 Gene3D G3DSA:3.30.460.20 1 133 1.0E-36 T 14-10-2018 D172_002820 2bbc7332f8216eba9f11a924aacb20e7 323 Pfam PF01544 CorA-like Mg2+ transporter protein 36 318 1.2E-60 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 D172_002820 2bbc7332f8216eba9f11a924aacb20e7 323 Gene3D G3DSA:1.20.58.340 134 262 2.2E-36 T 14-10-2018 D172_002820 2bbc7332f8216eba9f11a924aacb20e7 323 Gene3D G3DSA:1.20.58.340 266 323 3.6E-11 T 14-10-2018 D172_002820 2bbc7332f8216eba9f11a924aacb20e7 323 SUPERFAMILY SSF143865 3 256 1.23E-50 T 14-10-2018 D172_019305 bb293abeb50934676f8c5c6686972054 81 Gene3D G3DSA:1.10.1200.10 2 81 3.8E-16 T 14-10-2018 IPR036736 ACP-like superfamily D172_019305 bb293abeb50934676f8c5c6686972054 81 Pfam PF00550 Phosphopantetheine attachment site 10 75 6.1E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain D172_019305 bb293abeb50934676f8c5c6686972054 81 SUPERFAMILY SSF47336 4 80 1.83E-17 T 14-10-2018 IPR036736 ACP-like superfamily D172_019305 bb293abeb50934676f8c5c6686972054 81 Hamap MF_01217 Acyl carrier protein [acpP]. 6 80 13.763 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 D172_008095 5cb27127d1a05a1163d591847d0c9d08 381 SUPERFAMILY SSF51197 6 293 1.51E-75 T 14-10-2018 D172_008095 5cb27127d1a05a1163d591847d0c9d08 381 Gene3D G3DSA:2.60.120.650 3 207 2.4E-81 T 14-10-2018 D172_008095 5cb27127d1a05a1163d591847d0c9d08 381 Gene3D G3DSA:1.10.10.2510 208 381 3.2E-41 T 14-10-2018 D172_008095 5cb27127d1a05a1163d591847d0c9d08 381 Pfam PF08007 Cupin superfamily protein 12 313 2.8E-95 T 14-10-2018 IPR003347 JmjC domain D172_008095 5cb27127d1a05a1163d591847d0c9d08 381 SMART SM00558 94 218 1.7E-9 T 14-10-2018 IPR003347 JmjC domain D172_016610 0065185a625d9547a7ec1243cdd7945a 205 SUPERFAMILY SSF46785 3 70 2.72E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_016610 0065185a625d9547a7ec1243cdd7945a 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 153 165 8.8E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 D172_016610 0065185a625d9547a7ec1243cdd7945a 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 114 124 8.8E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 D172_016610 0065185a625d9547a7ec1243cdd7945a 205 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 136 8.8E-13 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 D172_016610 0065185a625d9547a7ec1243cdd7945a 205 Gene3D G3DSA:2.10.109.10 83 205 2.4E-44 T 14-10-2018 D172_016610 0065185a625d9547a7ec1243cdd7945a 205 Hamap MF_00015 LexA repressor [lexA]. 3 202 32.137 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 D172_016610 0065185a625d9547a7ec1243cdd7945a 205 Gene3D G3DSA:1.10.10.10 1 70 2.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_016610 0065185a625d9547a7ec1243cdd7945a 205 SUPERFAMILY SSF51306 78 201 7.5E-36 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily D172_016610 0065185a625d9547a7ec1243cdd7945a 205 TIGRFAM TIGR00498 lexA: repressor LexA 1 202 4.1E-80 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 D172_016610 0065185a625d9547a7ec1243cdd7945a 205 Pfam PF00717 Peptidase S24-like 117 183 8.8E-14 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C D172_016610 0065185a625d9547a7ec1243cdd7945a 205 Pfam PF01726 LexA DNA binding domain 1 65 8.9E-29 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 D172_014000 18466cb1b156efc78086b0d4b3402de0 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 137 161 3.6E-11 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 D172_014000 18466cb1b156efc78086b0d4b3402de0 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 195 214 3.6E-11 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 D172_014000 18466cb1b156efc78086b0d4b3402de0 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 57 79 3.6E-11 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 D172_014000 18466cb1b156efc78086b0d4b3402de0 255 PRINTS PR00164 ABC-2 type transport system membrane protein signature 175 194 3.6E-11 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 D172_014000 18466cb1b156efc78086b0d4b3402de0 255 Pfam PF01061 ABC-2 type transporter 8 217 3.6E-36 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 D172_014000 18466cb1b156efc78086b0d4b3402de0 255 PIRSF PIRSF006648 10 252 8.0E-24 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 D172_010890 9affc75e6f03ee23eb4fbda79ce67116 338 Pfam PF00561 alpha/beta hydrolase fold 73 188 7.0E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_010890 9affc75e6f03ee23eb4fbda79ce67116 338 SUPERFAMILY SSF53474 55 335 8.78E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_010890 9affc75e6f03ee23eb4fbda79ce67116 338 Gene3D G3DSA:3.40.50.1820 27 336 3.4E-73 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_010890 9affc75e6f03ee23eb4fbda79ce67116 338 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 113 6.5E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_010890 9affc75e6f03ee23eb4fbda79ce67116 338 PRINTS PR00111 Alpha/beta hydrolase fold signature 143 156 6.5E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_010890 9affc75e6f03ee23eb4fbda79ce67116 338 PRINTS PR00111 Alpha/beta hydrolase fold signature 157 170 6.5E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_009885 303f6e88ba494d34b8dc87ee8e26fea7 338 SUPERFAMILY SSF52096 87 288 1.9E-29 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_009885 303f6e88ba494d34b8dc87ee8e26fea7 338 Gene3D G3DSA:3.40.1750.20 191 255 5.3E-44 T 14-10-2018 D172_009885 303f6e88ba494d34b8dc87ee8e26fea7 338 Pfam PF08496 Peptidase family S49 N-terminal 2 147 1.4E-52 T 14-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 D172_009885 303f6e88ba494d34b8dc87ee8e26fea7 338 Gene3D G3DSA:3.90.226.10 98 290 5.3E-44 T 14-10-2018 D172_009885 303f6e88ba494d34b8dc87ee8e26fea7 338 Pfam PF01343 Peptidase family S49 151 298 2.0E-47 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 D172_021095 5512e9ae26d48cfddff3fcba9f73b02e 81 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D172_021095 5512e9ae26d48cfddff3fcba9f73b02e 81 Pfam PF00037 4Fe-4S binding domain 6 25 4.5E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D172_021095 5512e9ae26d48cfddff3fcba9f73b02e 81 SUPERFAMILY SSF54862 5 73 1.53E-18 T 14-10-2018 D172_021095 5512e9ae26d48cfddff3fcba9f73b02e 81 Gene3D G3DSA:3.30.70.20 2 81 2.6E-31 T 14-10-2018 D172_003115 3da63f5f1bf588566ba578dd6868ec43 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 149 2.4E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_003115 3da63f5f1bf588566ba578dd6868ec43 699 Pfam PF00593 TonB dependent receptor 245 697 4.0E-31 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_003115 3da63f5f1bf588566ba578dd6868ec43 699 Gene3D G3DSA:2.40.170.20 38 699 4.2E-117 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_003115 3da63f5f1bf588566ba578dd6868ec43 699 SUPERFAMILY SSF56935 21 698 3.85E-101 T 14-10-2018 D172_018370 9d66432313ba4d08a60de97fdc529ec1 477 Pfam PF02614 Glucuronate isomerase 20 459 1.3E-78 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 D172_018370 9d66432313ba4d08a60de97fdc529ec1 477 Hamap MF_00675 Uronate isomerase [uxaC]. 3 476 38.149 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 D172_018370 9d66432313ba4d08a60de97fdc529ec1 477 Gene3D G3DSA:3.20.20.140 20 462 1.0E-132 T 14-10-2018 D172_018370 9d66432313ba4d08a60de97fdc529ec1 477 SUPERFAMILY SSF51556 6 475 9.52E-150 T 14-10-2018 IPR032466 Metal-dependent hydrolase D172_018370 9d66432313ba4d08a60de97fdc529ec1 477 Gene3D G3DSA:1.10.2020.10 51 156 1.0E-132 T 14-10-2018 D172_004850 76f10a32b84781df8a0cc3985402a962 2092 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 209 348 1.3E-32 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 D172_004850 76f10a32b84781df8a0cc3985402a962 2092 SUPERFAMILY SSF103647 1253 1324 3.53E-5 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 D172_004850 76f10a32b84781df8a0cc3985402a962 2092 Gene3D G3DSA:3.10.170.10 200 352 2.1E-57 T 14-10-2018 D172_004850 76f10a32b84781df8a0cc3985402a962 2092 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 305 325 3.8E-19 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D172_004850 76f10a32b84781df8a0cc3985402a962 2092 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 360 371 3.8E-19 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D172_004850 76f10a32b84781df8a0cc3985402a962 2092 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 422 438 3.8E-19 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D172_004850 76f10a32b84781df8a0cc3985402a962 2092 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 339 355 3.8E-19 T 14-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 D172_004850 76f10a32b84781df8a0cc3985402a962 2092 Gene3D G3DSA:2.60.40.3010 1968 2053 7.1E-12 T 14-10-2018 D172_004850 76f10a32b84781df8a0cc3985402a962 2092 Gene3D G3DSA:1.10.390.10 353 500 3.7E-46 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily D172_004850 76f10a32b84781df8a0cc3985402a962 2092 Gene3D G3DSA:2.60.40.10 1867 1958 2.0E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_004850 76f10a32b84781df8a0cc3985402a962 2092 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 351 495 6.4E-32 T 14-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 D172_004850 76f10a32b84781df8a0cc3985402a962 2092 SUPERFAMILY SSF55486 201 498 9.89E-77 T 14-10-2018 D172_017760 876fc8ec1a4ca2ce80389ef0fe32543a 500 Pfam PF07012 Curlin associated repeat 329 363 2.1E-6 T 14-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 D172_017760 876fc8ec1a4ca2ce80389ef0fe32543a 500 Pfam PF07012 Curlin associated repeat 307 340 1.5E-6 T 14-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 D172_017760 876fc8ec1a4ca2ce80389ef0fe32543a 500 Pfam PF07012 Curlin associated repeat 262 294 5.2E-8 T 14-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 D172_017760 876fc8ec1a4ca2ce80389ef0fe32543a 500 Pfam PF07012 Curlin associated repeat 170 204 4.4E-5 T 14-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 D172_017760 876fc8ec1a4ca2ce80389ef0fe32543a 500 Pfam PF07012 Curlin associated repeat 409 440 2.0E-4 T 14-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 D172_017760 876fc8ec1a4ca2ce80389ef0fe32543a 500 Pfam PF07012 Curlin associated repeat 56 87 8.5E-6 T 14-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 D172_017760 876fc8ec1a4ca2ce80389ef0fe32543a 500 Pfam PF07012 Curlin associated repeat 216 250 7.2E-7 T 14-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 D172_020845 624065721449a7fafce9e570132abeb0 407 Gene3D G3DSA:3.30.1360.180 240 340 2.8E-110 T 14-10-2018 D172_020845 624065721449a7fafce9e570132abeb0 407 Gene3D G3DSA:3.40.720.10 29 385 2.8E-110 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D172_020845 624065721449a7fafce9e570132abeb0 407 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 29 342 8.8E-73 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 D172_020845 624065721449a7fafce9e570132abeb0 407 SUPERFAMILY SSF53649 20 382 1.96E-88 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D172_003525 ef1b41217197bd45985d09f3196a1bd3 249 Pfam PF02167 Cytochrome C1 family 39 248 5.5E-18 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 D172_003525 ef1b41217197bd45985d09f3196a1bd3 249 SUPERFAMILY SSF46626 23 213 3.58E-44 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_003525 ef1b41217197bd45985d09f3196a1bd3 249 Gene3D G3DSA:1.10.760.10 31 214 2.5E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 D172_012620 20fbfa3d3472ff4a83ae743606da79df 150 Gene3D G3DSA:3.10.129.10 3 150 3.2E-62 T 14-10-2018 D172_012620 20fbfa3d3472ff4a83ae743606da79df 150 SUPERFAMILY SSF54637 7 146 5.95E-52 T 14-10-2018 IPR029069 HotDog domain superfamily D172_012620 20fbfa3d3472ff4a83ae743606da79df 150 Pfam PF07977 FabA-like domain 17 141 3.1E-38 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D172_012620 20fbfa3d3472ff4a83ae743606da79df 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 2.5E-62 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D172_012620 20fbfa3d3472ff4a83ae743606da79df 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.261 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D172_009975 f4d4f8bcce877e7bd38132c1b038aa85 289 Pfam PF00892 EamA-like transporter family 152 283 1.4E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_009975 f4d4f8bcce877e7bd38132c1b038aa85 289 SUPERFAMILY SSF103481 189 287 4.58E-12 T 14-10-2018 D172_009975 f4d4f8bcce877e7bd38132c1b038aa85 289 SUPERFAMILY SSF103481 75 145 6.67E-5 T 14-10-2018 D172_009105 2b978a8c88241e49423a4fa11c7cc806 283 PIRSF PIRSF016184 30 272 2.3E-29 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 D172_009105 2b978a8c88241e49423a4fa11c7cc806 283 Pfam PF02567 Phenazine biosynthesis-like protein 38 259 1.6E-28 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 D172_009105 2b978a8c88241e49423a4fa11c7cc806 283 Gene3D G3DSA:3.10.310.10 142 282 5.5E-44 T 14-10-2018 D172_009105 2b978a8c88241e49423a4fa11c7cc806 283 Gene3D G3DSA:3.10.310.10 37 141 5.5E-44 T 14-10-2018 D172_009105 2b978a8c88241e49423a4fa11c7cc806 283 SUPERFAMILY SSF54506 38 282 4.71E-32 T 14-10-2018 D172_005840 bd34b4c016fae8b485c60153c900e41b 311 SUPERFAMILY SSF53335 21 300 1.3E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_005840 bd34b4c016fae8b485c60153c900e41b 311 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 11 307 51.285 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 D172_005840 bd34b4c016fae8b485c60153c900e41b 311 Pfam PF05175 Methyltransferase small domain 139 222 3.6E-16 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 D172_005840 bd34b4c016fae8b485c60153c900e41b 311 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 20 305 7.7E-82 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 D172_005840 bd34b4c016fae8b485c60153c900e41b 311 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 211 217 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D172_005840 bd34b4c016fae8b485c60153c900e41b 311 PIRSF PIRSF037167 5 311 2.1E-134 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 D172_005840 bd34b4c016fae8b485c60153c900e41b 311 Gene3D G3DSA:3.40.50.150 109 278 1.3E-44 T 14-10-2018 D172_005840 bd34b4c016fae8b485c60153c900e41b 311 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 18 301 1.5E-129 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 D172_011160 f2a1a9dac9a6d185a5fc27b8e18a26f0 190 Gene3D G3DSA:1.10.357.10 1 188 1.0E-41 T 14-10-2018 D172_011160 f2a1a9dac9a6d185a5fc27b8e18a26f0 190 SUPERFAMILY SSF46689 3 70 1.33E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_011160 f2a1a9dac9a6d185a5fc27b8e18a26f0 190 SUPERFAMILY SSF48498 98 176 1.08E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D172_011160 f2a1a9dac9a6d185a5fc27b8e18a26f0 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_011160 f2a1a9dac9a6d185a5fc27b8e18a26f0 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_011160 f2a1a9dac9a6d185a5fc27b8e18a26f0 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 50 1.4E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_014135 8dad63670e17611c28957c80682eec03 272 Pfam PF01694 Rhomboid family 129 264 2.2E-26 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 D172_014135 8dad63670e17611c28957c80682eec03 272 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 84 9.5E-28 T 14-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 D172_014135 8dad63670e17611c28957c80682eec03 272 SUPERFAMILY SSF144091 95 268 1.83E-32 T 14-10-2018 D172_014135 8dad63670e17611c28957c80682eec03 272 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 265 1.6E-97 T 14-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 D172_014135 8dad63670e17611c28957c80682eec03 272 Gene3D G3DSA:1.20.1540.10 95 267 1.6E-43 T 14-10-2018 IPR035952 Rhomboid-like superfamily D172_014135 8dad63670e17611c28957c80682eec03 272 Gene3D G3DSA:3.30.70.2350 1 68 8.4E-9 T 14-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily D172_001615 c93735d7e8e137be47c83e19bb3d3094 120 Gene3D G3DSA:1.20.5.710 2 49 5.9E-22 T 14-10-2018 D172_001615 c93735d7e8e137be47c83e19bb3d3094 120 SUPERFAMILY SSF48300 4 56 1.83E-15 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001615 c93735d7e8e137be47c83e19bb3d3094 120 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 48 7.2E-16 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001615 c93735d7e8e137be47c83e19bb3d3094 120 SUPERFAMILY SSF54736 49 120 5.23E-24 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D172_001615 c93735d7e8e137be47c83e19bb3d3094 120 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 54 120 8.1E-30 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001615 c93735d7e8e137be47c83e19bb3d3094 120 Gene3D G3DSA:3.30.1390.10 50 120 4.0E-30 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D172_001615 c93735d7e8e137be47c83e19bb3d3094 120 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 120 23.823 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001615 c93735d7e8e137be47c83e19bb3d3094 120 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 55 120 3.0E-28 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001615 c93735d7e8e137be47c83e19bb3d3094 120 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 120 1.8E-43 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_009465 02aa154577f42914e16f717caffbccff 390 PRINTS PR00359 B-class P450 signature 260 271 3.0E-32 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 D172_009465 02aa154577f42914e16f717caffbccff 390 PRINTS PR00359 B-class P450 signature 179 201 3.0E-32 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 D172_009465 02aa154577f42914e16f717caffbccff 390 PRINTS PR00359 B-class P450 signature 126 142 3.0E-32 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 D172_009465 02aa154577f42914e16f717caffbccff 390 PRINTS PR00359 B-class P450 signature 305 320 3.0E-32 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 D172_009465 02aa154577f42914e16f717caffbccff 390 PRINTS PR00359 B-class P450 signature 335 346 3.0E-32 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 D172_009465 02aa154577f42914e16f717caffbccff 390 PRINTS PR00359 B-class P450 signature 80 91 3.0E-32 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 D172_009465 02aa154577f42914e16f717caffbccff 390 PRINTS PR00359 B-class P450 signature 326 335 3.0E-32 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 D172_009465 02aa154577f42914e16f717caffbccff 390 PRINTS PR00359 B-class P450 signature 277 304 3.0E-32 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 D172_009465 02aa154577f42914e16f717caffbccff 390 Gene3D G3DSA:1.10.630.10 4 390 4.9E-74 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 D172_009465 02aa154577f42914e16f717caffbccff 390 Pfam PF00067 Cytochrome P450 155 348 9.9E-15 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 D172_009465 02aa154577f42914e16f717caffbccff 390 SUPERFAMILY SSF48264 32 387 1.31E-58 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 D172_019930 ae2b4476d2ad7b3c7363d6a3a7162793 362 SUPERFAMILY SSF55073 204 359 7.85E-42 T 14-10-2018 IPR029787 Nucleotide cyclase D172_019930 ae2b4476d2ad7b3c7363d6a3a7162793 362 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 198 359 1.1E-46 T 14-10-2018 IPR000160 GGDEF domain D172_019930 ae2b4476d2ad7b3c7363d6a3a7162793 362 Gene3D G3DSA:3.30.70.270 194 362 4.4E-48 T 14-10-2018 D172_019930 ae2b4476d2ad7b3c7363d6a3a7162793 362 SMART SM00267 188 360 3.7E-50 T 14-10-2018 IPR000160 GGDEF domain D172_019930 ae2b4476d2ad7b3c7363d6a3a7162793 362 Pfam PF00990 Diguanylate cyclase, GGDEF domain 199 356 1.6E-41 T 14-10-2018 IPR000160 GGDEF domain D172_015455 e892da13617ef0f5c6d3df25c8b752df 266 SMART SM00849 14 206 0.0027 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_015455 e892da13617ef0f5c6d3df25c8b752df 266 Gene3D G3DSA:3.60.15.10 3 265 4.3E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_015455 e892da13617ef0f5c6d3df25c8b752df 266 Pfam PF12706 Beta-lactamase superfamily domain 29 226 9.5E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_015455 e892da13617ef0f5c6d3df25c8b752df 266 SUPERFAMILY SSF56281 12 250 4.46E-40 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_015380 d2d49f201ae73d3bcec34713df72f38c 197 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 114 148 6.8E-8 T 14-10-2018 IPR001451 Hexapeptide repeat D172_015380 d2d49f201ae73d3bcec34713df72f38c 197 SUPERFAMILY SSF51161 28 174 5.13E-34 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily D172_015380 d2d49f201ae73d3bcec34713df72f38c 197 Gene3D G3DSA:2.160.10.10 15 197 2.7E-48 T 14-10-2018 D172_015380 d2d49f201ae73d3bcec34713df72f38c 197 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 122 150 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D172_000230 79c53e74f1aeaf345d1c78f2f5085b08 126 Pfam PF03899 ATP synthase I chain 15 111 2.5E-16 T 14-10-2018 IPR005598 ATP synthase protein I D172_000750 f62e3fb4aa98494f721532f359eae9ec 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 275 1.5E-98 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 D172_000750 f62e3fb4aa98494f721532f359eae9ec 276 SUPERFAMILY SSF54506 3 275 5.72E-53 T 14-10-2018 D172_000750 f62e3fb4aa98494f721532f359eae9ec 276 Gene3D G3DSA:3.10.310.10 117 263 1.2E-106 T 14-10-2018 D172_000750 f62e3fb4aa98494f721532f359eae9ec 276 Gene3D G3DSA:3.10.310.10 5 271 1.2E-106 T 14-10-2018 D172_000750 f62e3fb4aa98494f721532f359eae9ec 276 Pfam PF01678 Diaminopimelate epimerase 5 125 8.1E-35 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 D172_000750 f62e3fb4aa98494f721532f359eae9ec 276 Pfam PF01678 Diaminopimelate epimerase 154 268 2.2E-28 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 D172_000750 f62e3fb4aa98494f721532f359eae9ec 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 D172_000750 f62e3fb4aa98494f721532f359eae9ec 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 38.797 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 D172_007285 839e9bbe6f265a87fdc50dd489ba98b5 283 SUPERFAMILY SSF52402 162 283 2.6E-20 T 14-10-2018 D172_007285 839e9bbe6f265a87fdc50dd489ba98b5 283 PRINTS PR01438 Universal stress protein signature 163 181 2.4E-9 T 14-10-2018 IPR006015 Universal stress protein A D172_007285 839e9bbe6f265a87fdc50dd489ba98b5 283 PRINTS PR01438 Universal stress protein signature 243 255 2.4E-9 T 14-10-2018 IPR006015 Universal stress protein A D172_007285 839e9bbe6f265a87fdc50dd489ba98b5 283 PRINTS PR01438 Universal stress protein signature 261 283 2.4E-9 T 14-10-2018 IPR006015 Universal stress protein A D172_007285 839e9bbe6f265a87fdc50dd489ba98b5 283 Gene3D G3DSA:3.40.50.12370 2 283 1.0E-58 T 14-10-2018 D172_007285 839e9bbe6f265a87fdc50dd489ba98b5 283 SUPERFAMILY SSF52402 2 157 9.21E-16 T 14-10-2018 D172_007285 839e9bbe6f265a87fdc50dd489ba98b5 283 Pfam PF00582 Universal stress protein family 165 283 2.6E-11 T 14-10-2018 IPR006016 UspA D172_007285 839e9bbe6f265a87fdc50dd489ba98b5 283 Pfam PF00582 Universal stress protein family 2 157 9.6E-10 T 14-10-2018 IPR006016 UspA D172_014175 770c490825aa1b935222fb2f676b82cc 357 SUPERFAMILY SSF53756 55 352 2.89E-16 T 14-10-2018 D172_006770 2c3e4992149682bd898deb81d8577503 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 3.4E-32 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 D172_007060 e988a68c6e15197fcf9936d5d72616b4 328 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 327 31.389 T 14-10-2018 IPR003770 Endolytic murein transglycosylase D172_007060 e988a68c6e15197fcf9936d5d72616b4 328 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 2 327 4.3E-92 T 14-10-2018 IPR003770 Endolytic murein transglycosylase D172_007060 e988a68c6e15197fcf9936d5d72616b4 328 Gene3D G3DSA:3.30.160.60 294 328 8.7E-12 T 14-10-2018 D172_007060 e988a68c6e15197fcf9936d5d72616b4 328 Pfam PF02618 YceG-like family 39 320 4.6E-79 T 14-10-2018 IPR003770 Endolytic murein transglycosylase D172_009260 35f460500d327a0df1824a2de646ed48 518 Gene3D G3DSA:2.60.120.200 301 514 4.2E-22 T 14-10-2018 D172_009260 35f460500d327a0df1824a2de646ed48 518 Pfam PF04773 FecR protein 148 230 6.1E-8 T 14-10-2018 IPR006860 FecR protein D172_009260 35f460500d327a0df1824a2de646ed48 518 SUPERFAMILY SSF49899 277 513 7.36E-27 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D172_009260 35f460500d327a0df1824a2de646ed48 518 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 332 507 3.4E-14 T 14-10-2018 D172_002390 0a995242f7fb083eac9851fe0c759f0c 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 6.7E-42 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 D172_002390 0a995242f7fb083eac9851fe0c759f0c 299 Pfam PF04261 Dyp-type peroxidase family 44 293 3.1E-44 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 D172_002390 0a995242f7fb083eac9851fe0c759f0c 299 SUPERFAMILY SSF54909 1 298 1.79E-77 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel D172_007620 3cf855029da032eb094b481aeced1cc0 294 Gene3D G3DSA:3.40.190.290 94 281 1.2E-28 T 14-10-2018 D172_007620 3cf855029da032eb094b481aeced1cc0 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.3E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_007620 3cf855029da032eb094b481aeced1cc0 294 SUPERFAMILY SSF46785 4 113 4.76E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_007620 3cf855029da032eb094b481aeced1cc0 294 SUPERFAMILY SSF53850 92 284 7.24E-27 T 14-10-2018 D172_007620 3cf855029da032eb094b481aeced1cc0 294 Gene3D G3DSA:1.10.10.10 2 93 2.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_007620 3cf855029da032eb094b481aeced1cc0 294 Pfam PF03466 LysR substrate binding domain 92 281 3.0E-20 T 14-10-2018 IPR005119 LysR, substrate-binding D172_002590 fb60f40b4fe254b323d64254a69f27da 311 Pfam PF12048 Protein of unknown function (DUF3530) 26 308 1.4E-42 T 14-10-2018 IPR022529 Protein of unknown function DUF3530 D172_007740 213ae3438bec62d528743debef122993 475 Gene3D G3DSA:3.40.309.10 252 441 1.4E-146 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D172_007740 213ae3438bec62d528743debef122993 475 Gene3D G3DSA:3.40.605.10 16 468 1.4E-146 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D172_007740 213ae3438bec62d528743debef122993 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 D172_007740 213ae3438bec62d528743debef122993 475 Pfam PF00171 Aldehyde dehydrogenase family 17 469 8.6E-142 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D172_007740 213ae3438bec62d528743debef122993 475 SUPERFAMILY SSF53720 4 470 5.76E-139 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D172_000760 f13d5fd2cf60256a72cbb6eaddf47873 64 Pfam PF13627 Prokaryotic lipoprotein-attachment site 12 34 3.5E-8 T 14-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site D172_015595 42e59be6d46207ca52deaa0df2c064e8 1540 Gene3D G3DSA:2.160.10.10 963 1176 3.4E-6 T 14-10-2018 D172_015595 42e59be6d46207ca52deaa0df2c064e8 1540 SUPERFAMILY SSF51126 1311 1508 5.93E-5 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor D172_020915 df9399c78ba41ea6167e28dc3dbfb56c 205 Gene3D G3DSA:1.20.1050.10 84 198 1.7E-31 T 14-10-2018 D172_020915 df9399c78ba41ea6167e28dc3dbfb56c 205 SUPERFAMILY SSF52833 1 78 9.31E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_020915 df9399c78ba41ea6167e28dc3dbfb56c 205 Pfam PF14497 Glutathione S-transferase, C-terminal domain 117 193 1.9E-7 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal D172_020915 df9399c78ba41ea6167e28dc3dbfb56c 205 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 7.6E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D172_020915 df9399c78ba41ea6167e28dc3dbfb56c 205 Gene3D G3DSA:3.40.30.10 1 83 1.1E-33 T 14-10-2018 D172_020915 df9399c78ba41ea6167e28dc3dbfb56c 205 SUPERFAMILY SSF47616 82 199 3.48E-18 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D172_012210 0db3910aa393e89c965562538da7b165 79 SUPERFAMILY SSF54928 2 77 7.66E-24 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 D172_012210 0db3910aa393e89c965562538da7b165 79 SMART SM00360 2 75 5.4E-22 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 D172_012210 0db3910aa393e89c965562538da7b165 79 Gene3D G3DSA:3.30.70.330 1 79 9.4E-24 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily D172_012210 0db3910aa393e89c965562538da7b165 79 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 7.1E-20 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 D172_000245 0ff3f786bc0ba630e1fb0850cabccc31 156 Gene3D G3DSA:1.20.5.620 62 122 1.3E-18 T 14-10-2018 D172_000245 0ff3f786bc0ba630e1fb0850cabccc31 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 4.3E-34 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 D172_000245 0ff3f786bc0ba630e1fb0850cabccc31 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 11 156 3.8E-47 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 D172_000245 0ff3f786bc0ba630e1fb0850cabccc31 156 SUPERFAMILY SSF81573 63 121 1.18E-13 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily D172_000245 0ff3f786bc0ba630e1fb0850cabccc31 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 12.225 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 D172_012720 7db1fc2227082f01c226452b359cc081 341 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 98 323 7.9E-53 T 14-10-2018 IPR006507 Uncharacterised protein family UPF0283 D172_012720 7db1fc2227082f01c226452b359cc081 341 Pfam PF05128 Domain of unknown function (DUF697) 173 329 3.2E-47 T 14-10-2018 IPR021147 Protein of unknown function DUF697 D172_007430 5b08ca67ea7bf86d504fffe51dc03204 451 SUPERFAMILY SSF103473 13 433 1.09E-38 T 14-10-2018 IPR036259 MFS transporter superfamily D172_007430 5b08ca67ea7bf86d504fffe51dc03204 451 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 13 445 1.8E-117 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 D172_007430 5b08ca67ea7bf86d504fffe51dc03204 451 Pfam PF13347 MFS/sugar transport protein 15 434 1.8E-100 T 14-10-2018 D172_007430 5b08ca67ea7bf86d504fffe51dc03204 451 Gene3D G3DSA:1.20.1250.20 228 436 1.6E-10 T 14-10-2018 D172_007430 5b08ca67ea7bf86d504fffe51dc03204 451 Gene3D G3DSA:1.20.1250.20 14 219 1.1E-14 T 14-10-2018 D172_004885 fa108e77a9ba8ef68e7a211efc9ce897 377 Gene3D G3DSA:3.40.50.150 9 182 7.1E-54 T 14-10-2018 D172_004885 fa108e77a9ba8ef68e7a211efc9ce897 377 Gene3D G3DSA:3.40.50.150 187 376 2.2E-55 T 14-10-2018 D172_004885 fa108e77a9ba8ef68e7a211efc9ce897 377 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 375 50.345 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 D172_004885 fa108e77a9ba8ef68e7a211efc9ce897 377 SUPERFAMILY SSF53335 191 360 3.47E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_004885 fa108e77a9ba8ef68e7a211efc9ce897 377 PIRSF PIRSF037565 1 376 1.6E-163 T 14-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 D172_004885 fa108e77a9ba8ef68e7a211efc9ce897 377 Pfam PF05175 Methyltransferase small domain 200 371 1.8E-56 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 D172_004885 fa108e77a9ba8ef68e7a211efc9ce897 377 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 304 310 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D172_020420 d13606d49f95a0ac7ac3ad4d1e69f6f7 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 2.6E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D172_020420 d13606d49f95a0ac7ac3ad4d1e69f6f7 118 Gene3D G3DSA:3.10.180.10 6 117 2.4E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_020420 d13606d49f95a0ac7ac3ad4d1e69f6f7 118 SUPERFAMILY SSF54593 5 117 7.05E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_019785 6f113b41030cfe14542515b7a126836d 433 Gene3D G3DSA:3.40.50.1980 30 231 5.0E-113 T 14-10-2018 D172_019785 6f113b41030cfe14542515b7a126836d 433 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 229 261 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 D172_019785 6f113b41030cfe14542515b7a126836d 433 Gene3D G3DSA:3.40.50.1980 233 348 5.0E-113 T 14-10-2018 D172_019785 6f113b41030cfe14542515b7a126836d 433 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 32 425 4.2E-155 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D172_019785 6f113b41030cfe14542515b7a126836d 433 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 426 37.989 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D172_019785 6f113b41030cfe14542515b7a126836d 433 SUPERFAMILY SSF53720 14 426 1.67E-75 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D172_019785 6f113b41030cfe14542515b7a126836d 433 PRINTS PR00083 Histidinol dehydrogenase signature 31 55 6.5E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D172_019785 6f113b41030cfe14542515b7a126836d 433 PRINTS PR00083 Histidinol dehydrogenase signature 104 131 6.5E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D172_019785 6f113b41030cfe14542515b7a126836d 433 PRINTS PR00083 Histidinol dehydrogenase signature 167 193 6.5E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D172_019785 6f113b41030cfe14542515b7a126836d 433 PRINTS PR00083 Histidinol dehydrogenase signature 319 344 6.5E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D172_019785 6f113b41030cfe14542515b7a126836d 433 PRINTS PR00083 Histidinol dehydrogenase signature 229 250 6.5E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D172_019785 6f113b41030cfe14542515b7a126836d 433 PRINTS PR00083 Histidinol dehydrogenase signature 251 270 6.5E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D172_019785 6f113b41030cfe14542515b7a126836d 433 PRINTS PR00083 Histidinol dehydrogenase signature 360 378 6.5E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D172_019785 6f113b41030cfe14542515b7a126836d 433 PRINTS PR00083 Histidinol dehydrogenase signature 197 222 6.5E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D172_019785 6f113b41030cfe14542515b7a126836d 433 Pfam PF00815 Histidinol dehydrogenase 24 426 9.1E-157 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D172_019785 6f113b41030cfe14542515b7a126836d 433 PIRSF PIRSF000099 1 429 2.9E-152 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 D172_001430 a07132c2f530ef15eeaaefd4dcfd047a 115 Pfam PF12290 Protein of unknown function (DUF3802) 1 111 2.0E-46 T 14-10-2018 IPR020979 Uncharacterised protein family A0KLC6 D172_011330 f63e1552f467a6dd71184e7910aa1f96 115 Gene3D G3DSA:3.40.30.10 1 115 7.0E-45 T 14-10-2018 D172_011330 f63e1552f467a6dd71184e7910aa1f96 115 SUPERFAMILY SSF52833 2 115 3.92E-30 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_011330 f63e1552f467a6dd71184e7910aa1f96 115 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 115 4.6E-44 T 14-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 D172_011330 f63e1552f467a6dd71184e7910aa1f96 115 Pfam PF03960 ArsC family 6 112 1.7E-18 T 14-10-2018 IPR006660 Arsenate reductase-like D172_008070 9e83afba75336440d19821a35b719772 265 SUPERFAMILY SSF53335 12 228 1.11E-14 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_008070 9e83afba75336440d19821a35b719772 265 Gene3D G3DSA:3.40.50.150 26 245 1.9E-22 T 14-10-2018 D172_010015 046a33a2bd1294722ba4e95777bc5789 405 Pfam PF00155 Aminotransferase class I and II 35 384 1.5E-47 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D172_010015 046a33a2bd1294722ba4e95777bc5789 405 Gene3D G3DSA:3.40.640.10 53 294 4.7E-140 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_010015 046a33a2bd1294722ba4e95777bc5789 405 SUPERFAMILY SSF53383 6 401 2.45E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_010015 046a33a2bd1294722ba4e95777bc5789 405 Gene3D G3DSA:3.90.1150.10 21 398 4.7E-140 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_004200 3a02963a7346e9c8fcac81d0feb3f30d 218 SUPERFAMILY SSF51206 16 130 2.23E-17 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like D172_004200 3a02963a7346e9c8fcac81d0feb3f30d 218 Pfam PF00027 Cyclic nucleotide-binding domain 26 107 2.9E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain D172_004200 3a02963a7346e9c8fcac81d0feb3f30d 218 Gene3D G3DSA:2.60.120.10 4 133 1.2E-13 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_012770 2d63953415bc49742fe1543be4077f0c 253 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_012770 2d63953415bc49742fe1543be4077f0c 253 Gene3D G3DSA:3.40.50.300 2 253 4.1E-72 T 14-10-2018 D172_012770 2d63953415bc49742fe1543be4077f0c 253 Pfam PF00005 ABC transporter 29 178 1.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_012770 2d63953415bc49742fe1543be4077f0c 253 SMART SM00382 38 228 4.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_012770 2d63953415bc49742fe1543be4077f0c 253 SUPERFAMILY SSF52540 3 251 2.05E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_007190 2101d09c720b6bc33b4215aa7e369ec6 226 SUPERFAMILY SSF53448 9 208 1.82E-19 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_007190 2101d09c720b6bc33b4215aa7e369ec6 226 Pfam PF12804 MobA-like NTP transferase domain 11 149 1.2E-22 T 14-10-2018 IPR025877 MobA-like NTP transferase D172_007190 2101d09c720b6bc33b4215aa7e369ec6 226 Gene3D G3DSA:3.90.550.10 1 215 6.5E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_018795 ce87381edd090bbe0c7388c178983063 325 SUPERFAMILY SSF46785 1 86 3.11E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_018795 ce87381edd090bbe0c7388c178983063 325 Gene3D G3DSA:3.40.190.10 167 268 9.0E-99 T 14-10-2018 D172_018795 ce87381edd090bbe0c7388c178983063 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_018795 ce87381edd090bbe0c7388c178983063 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_018795 ce87381edd090bbe0c7388c178983063 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_018795 ce87381edd090bbe0c7388c178983063 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 4.5E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_018795 ce87381edd090bbe0c7388c178983063 325 Gene3D G3DSA:1.10.10.10 1 86 2.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_018795 ce87381edd090bbe0c7388c178983063 325 Gene3D G3DSA:3.40.190.10 92 304 9.0E-99 T 14-10-2018 D172_018795 ce87381edd090bbe0c7388c178983063 325 SUPERFAMILY SSF53850 92 322 2.38E-42 T 14-10-2018 D172_018795 ce87381edd090bbe0c7388c178983063 325 Pfam PF03466 LysR substrate binding domain 91 293 2.9E-40 T 14-10-2018 IPR005119 LysR, substrate-binding D172_001965 eeefaf5e702b2d9ab2f68efcab03c278 233 Gene3D G3DSA:1.20.58.220 1 116 5.9E-43 T 14-10-2018 IPR038078 PhoU-like domain superfamily D172_001965 eeefaf5e702b2d9ab2f68efcab03c278 233 PIRSF PIRSF003107 6 226 2.3E-71 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 D172_001965 eeefaf5e702b2d9ab2f68efcab03c278 233 Pfam PF01895 PhoU domain 25 111 2.3E-22 T 14-10-2018 IPR026022 PhoU domain D172_001965 eeefaf5e702b2d9ab2f68efcab03c278 233 Pfam PF01895 PhoU domain 127 212 1.4E-18 T 14-10-2018 IPR026022 PhoU domain D172_001965 eeefaf5e702b2d9ab2f68efcab03c278 233 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 12 221 5.3E-76 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 D172_001965 eeefaf5e702b2d9ab2f68efcab03c278 233 SUPERFAMILY SSF109755 12 231 3.56E-72 T 14-10-2018 D172_001965 eeefaf5e702b2d9ab2f68efcab03c278 233 Gene3D G3DSA:1.20.58.220 118 232 3.5E-36 T 14-10-2018 IPR038078 PhoU-like domain superfamily D172_007350 9d4c7aa0383b1ad63e862f85578634b1 601 Gene3D G3DSA:3.90.550.10 31 264 6.7E-16 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_007350 9d4c7aa0383b1ad63e862f85578634b1 601 SUPERFAMILY SSF53448 36 316 4.31E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_007350 9d4c7aa0383b1ad63e862f85578634b1 601 Pfam PF13641 Glycosyltransferase like family 2 48 247 2.3E-9 T 14-10-2018 D172_007350 9d4c7aa0383b1ad63e862f85578634b1 601 Pfam PF02397 Bacterial sugar transferase 403 596 2.9E-58 T 14-10-2018 IPR003362 Bacterial sugar transferase D172_008015 eeec463b6434ac35909ecd8d528c825d 364 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 29 315 3.4E-9 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase D172_008015 eeec463b6434ac35909ecd8d528c825d 364 SUPERFAMILY SSF56219 20 362 8.52E-26 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily D172_020990 dba6806f9b9d3035d734c86b4dccf3b9 575 Pfam PF05960 Bacterial protein of unknown function (DUF885) 54 563 9.6E-144 T 14-10-2018 IPR010281 Protein of unknown function DUF885 D172_018665 21901aaa7d6366f91814b46c412b76bd 156 Pfam PF00210 Ferritin-like domain 8 144 1.5E-35 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 D172_018665 21901aaa7d6366f91814b46c412b76bd 156 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 8.7E-53 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018665 21901aaa7d6366f91814b46c412b76bd 156 PRINTS PR00601 Bacterioferritin signature 23 43 9.3E-50 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018665 21901aaa7d6366f91814b46c412b76bd 156 PRINTS PR00601 Bacterioferritin signature 44 64 9.3E-50 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018665 21901aaa7d6366f91814b46c412b76bd 156 PRINTS PR00601 Bacterioferritin signature 129 150 9.3E-50 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018665 21901aaa7d6366f91814b46c412b76bd 156 PRINTS PR00601 Bacterioferritin signature 3 22 9.3E-50 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018665 21901aaa7d6366f91814b46c412b76bd 156 PRINTS PR00601 Bacterioferritin signature 86 106 9.3E-50 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018665 21901aaa7d6366f91814b46c412b76bd 156 PRINTS PR00601 Bacterioferritin signature 65 85 9.3E-50 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018665 21901aaa7d6366f91814b46c412b76bd 156 PRINTS PR00601 Bacterioferritin signature 107 127 9.3E-50 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_018665 21901aaa7d6366f91814b46c412b76bd 156 SUPERFAMILY SSF47240 1 155 1.23E-46 T 14-10-2018 IPR009078 Ferritin-like superfamily D172_018665 21901aaa7d6366f91814b46c412b76bd 156 Gene3D G3DSA:1.20.1260.10 1 155 5.8E-60 T 14-10-2018 IPR012347 Ferritin-like D172_018665 21901aaa7d6366f91814b46c412b76bd 156 PIRSF PIRSF002560 1 156 2.5E-63 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 D172_004555 802f3e43b25b6bb1f6d53bc3609c525d 118 SUPERFAMILY SSF69754 2 100 6.41E-27 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like D172_004555 802f3e43b25b6bb1f6d53bc3609c525d 118 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 6.9E-19 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 D172_004555 802f3e43b25b6bb1f6d53bc3609c525d 118 Gene3D G3DSA:3.30.160.100 1 107 6.6E-24 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like D172_004555 802f3e43b25b6bb1f6d53bc3609c525d 118 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 4.8E-20 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 D172_020950 7a024b152ad5783254d2c14e2d67541e 65 SUPERFAMILY SSF55331 2 60 9.44E-15 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily D172_020950 7a024b152ad5783254d2c14e2d67541e 65 Pfam PF01361 Tautomerase enzyme 2 58 6.4E-16 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 D172_020950 7a024b152ad5783254d2c14e2d67541e 65 Gene3D G3DSA:3.30.429.10 1 64 6.4E-17 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily D172_018200 bc74b63af150626daed5e12b71fa6e19 584 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 412 570 7.3E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D172_018200 bc74b63af150626daed5e12b71fa6e19 584 SUPERFAMILY SSF161098 34 298 3.92E-18 T 14-10-2018 IPR035906 MetI-like superfamily D172_018200 bc74b63af150626daed5e12b71fa6e19 584 Gene3D G3DSA:1.10.3720.10 324 575 1.0E-22 T 14-10-2018 IPR035906 MetI-like superfamily D172_018200 bc74b63af150626daed5e12b71fa6e19 584 Gene3D G3DSA:1.10.3720.10 32 307 9.5E-18 T 14-10-2018 IPR035906 MetI-like superfamily D172_018200 bc74b63af150626daed5e12b71fa6e19 584 SUPERFAMILY SSF161098 331 572 1.68E-27 T 14-10-2018 IPR035906 MetI-like superfamily D172_007100 1705176ba58445aff4b476a4ac4f2c27 292 ProSitePatterns PS00161 Isocitrate lyase signature. 117 122 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 D172_007100 1705176ba58445aff4b476a4ac4f2c27 292 Pfam PF13714 Phosphoenolpyruvate phosphomutase 13 250 3.2E-50 T 14-10-2018 D172_007100 1705176ba58445aff4b476a4ac4f2c27 292 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 4 287 1.6E-128 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 D172_007100 1705176ba58445aff4b476a4ac4f2c27 292 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 1 288 48.738 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 D172_007100 1705176ba58445aff4b476a4ac4f2c27 292 Gene3D G3DSA:3.20.20.60 2 292 8.6E-102 T 14-10-2018 D172_007100 1705176ba58445aff4b476a4ac4f2c27 292 SUPERFAMILY SSF51621 6 286 6.28E-99 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D172_013975 00c70a0c270b5e7ccb4b77308acf8581 336 SUPERFAMILY SSF51735 2 180 5.66E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_013975 00c70a0c270b5e7ccb4b77308acf8581 336 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 150 166 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D172_013975 00c70a0c270b5e7ccb4b77308acf8581 336 Gene3D G3DSA:3.40.50.720 5 328 1.9E-108 T 14-10-2018 D172_013975 00c70a0c270b5e7ccb4b77308acf8581 336 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 1 333 4.7E-109 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D172_013975 00c70a0c270b5e7ccb4b77308acf8581 336 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 333 35.547 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D172_013975 00c70a0c270b5e7ccb4b77308acf8581 336 Gene3D G3DSA:3.30.360.10 154 311 1.9E-108 T 14-10-2018 D172_013975 00c70a0c270b5e7ccb4b77308acf8581 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 310 5.5E-14 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 D172_013975 00c70a0c270b5e7ccb4b77308acf8581 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 147 5.1E-22 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 D172_013975 00c70a0c270b5e7ccb4b77308acf8581 336 SMART SM00859 2 147 9.2E-39 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 D172_013975 00c70a0c270b5e7ccb4b77308acf8581 336 SUPERFAMILY SSF55347 155 307 5.12E-46 T 14-10-2018 D172_005885 785e8bf2794773f8b7f268abcf8ba118 91 Pfam PF08891 YfcL protein 5 88 9.0E-29 T 14-10-2018 IPR014987 Uncharacterised protein family YfcL D172_002160 ac58f7968d197c8e28422791823ca4a3 293 SUPERFAMILY SSF53335 65 270 1.25E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_002160 ac58f7968d197c8e28422791823ca4a3 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 291 8.7E-98 T 14-10-2018 D172_002160 ac58f7968d197c8e28422791823ca4a3 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 284 8.0E-101 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 D172_002160 ac58f7968d197c8e28422791823ca4a3 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 291 32.249 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 D172_002160 ac58f7968d197c8e28422791823ca4a3 293 PIRSF PIRSF000401 1 293 7.3E-95 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 D172_002160 ac58f7968d197c8e28422791823ca4a3 293 Gene3D G3DSA:3.40.50.150 101 293 8.9E-55 T 14-10-2018 D172_018760 5c2aea2bd001be43984cfbd346d58d26 359 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 321 64.653 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D172_018760 5c2aea2bd001be43984cfbd346d58d26 359 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 232 321 1.6E-33 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D172_018760 5c2aea2bd001be43984cfbd346d58d26 359 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 321 2.0E-100 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D172_018760 5c2aea2bd001be43984cfbd346d58d26 359 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 105 182 3.0E-25 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 D172_018760 5c2aea2bd001be43984cfbd346d58d26 359 SUPERFAMILY SSF53901 2 322 6.97E-65 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_018760 5c2aea2bd001be43984cfbd346d58d26 359 Gene3D G3DSA:3.40.47.10 1 359 1.5E-133 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_009200 90cffd257173112781ebb778900fa633 236 Gene3D G3DSA:3.40.50.150 11 234 5.9E-71 T 14-10-2018 D172_009200 90cffd257173112781ebb778900fa633 236 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 235 36.133 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 D172_009200 90cffd257173112781ebb778900fa633 236 SUPERFAMILY SSF53335 17 215 1.67E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_009200 90cffd257173112781ebb778900fa633 236 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 6.9E-84 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 D172_009200 90cffd257173112781ebb778900fa633 236 Pfam PF13489 Methyltransferase domain 52 204 5.6E-24 T 14-10-2018 D172_005320 0d33155e587b253a72a9e2732f8b106d 157 SUPERFAMILY SSF54637 18 153 3.73E-22 T 14-10-2018 IPR029069 HotDog domain superfamily D172_005320 0d33155e587b253a72a9e2732f8b106d 157 Gene3D G3DSA:3.10.129.10 12 156 7.4E-45 T 14-10-2018 D172_005320 0d33155e587b253a72a9e2732f8b106d 157 Pfam PF14539 Domain of unknown function (DUF4442) 20 153 1.9E-51 T 14-10-2018 IPR027961 Protein of unknown function DUF4442 D172_007425 c8a06c8683419ce5041596c4ec503e2d 231 Gene3D G3DSA:3.90.79.10 8 140 3.4E-34 T 14-10-2018 D172_007425 c8a06c8683419ce5041596c4ec503e2d 231 Gene3D G3DSA:1.10.10.10 145 227 1.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_007425 c8a06c8683419ce5041596c4ec503e2d 231 SUPERFAMILY SSF55811 14 148 9.8E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D172_007425 c8a06c8683419ce5041596c4ec503e2d 231 SUPERFAMILY SSF46785 152 226 2.31E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_003880 add2962d0571bc2eec84991e8d299983 225 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 10 211 1.6E-88 T 14-10-2018 IPR008517 Protein of unknown function DUF799 D172_003880 add2962d0571bc2eec84991e8d299983 225 Gene3D G3DSA:3.40.50.10610 25 191 6.5E-62 T 14-10-2018 D172_005970 ca6ed2d692f321a82c82570a8edc3766 732 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 570 730 2.5E-26 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_005970 ca6ed2d692f321a82c82570a8edc3766 732 Gene3D G3DSA:3.30.420.10 563 731 4.1E-43 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_005970 ca6ed2d692f321a82c82570a8edc3766 732 SUPERFAMILY SSF53098 566 727 9.87E-50 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_005970 ca6ed2d692f321a82c82570a8edc3766 732 Pfam PF08774 VRR-NUC domain 487 559 6.8E-9 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 D172_005970 ca6ed2d692f321a82c82570a8edc3766 732 Gene3D G3DSA:3.40.1350.10 487 562 2.0E-10 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 D172_005970 ca6ed2d692f321a82c82570a8edc3766 732 SMART SM00990 447 559 4.4E-15 T 14-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 D172_005970 ca6ed2d692f321a82c82570a8edc3766 732 SMART SM00479 566 731 2.4E-35 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D172_005970 ca6ed2d692f321a82c82570a8edc3766 732 Pfam PF00929 Exonuclease 569 722 2.7E-24 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III D172_020365 ccfede35800f7afa312d5bc63cd44c66 1062 SUPERFAMILY SSF49478 778 836 3.02E-10 T 14-10-2018 D172_020365 ccfede35800f7afa312d5bc63cd44c66 1062 Gene3D G3DSA:2.60.40.10 774 896 2.4E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_020365 ccfede35800f7afa312d5bc63cd44c66 1062 SUPERFAMILY SSF110997 886 946 5.1E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D172_020365 ccfede35800f7afa312d5bc63cd44c66 1062 Pfam PF17210 SdrD B-like domain 787 837 3.3E-9 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain D172_006780 db456efcadde7f07e4d41d06a2493564 789 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 772 789 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site D172_006780 db456efcadde7f07e4d41d06a2493564 789 Pfam PF07715 TonB-dependent Receptor Plug Domain 39 144 4.5E-9 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_006780 db456efcadde7f07e4d41d06a2493564 789 SUPERFAMILY SSF56935 26 789 1.13E-85 T 14-10-2018 D172_006780 db456efcadde7f07e4d41d06a2493564 789 Gene3D G3DSA:2.170.130.10 37 165 4.9E-11 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_006780 db456efcadde7f07e4d41d06a2493564 789 Pfam PF00593 TonB dependent receptor 319 786 6.8E-40 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_013230 c3a15a735e2349e06ffc071cfa7ad1cc 408 SUPERFAMILY SSF141868 3 193 3.92E-27 T 14-10-2018 IPR035919 EAL domain superfamily D172_013230 c3a15a735e2349e06ffc071cfa7ad1cc 408 SMART SM00052 3 196 1.6E-4 T 14-10-2018 IPR001633 EAL domain D172_013230 c3a15a735e2349e06ffc071cfa7ad1cc 408 SUPERFAMILY SSF109604 182 399 2.29E-42 T 14-10-2018 D172_013230 c3a15a735e2349e06ffc071cfa7ad1cc 408 PIRSF PIRSF003180 1 404 6.6E-134 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing D172_013230 c3a15a735e2349e06ffc071cfa7ad1cc 408 Gene3D G3DSA:1.10.3210.10 196 404 1.2E-23 T 14-10-2018 D172_013230 c3a15a735e2349e06ffc071cfa7ad1cc 408 Gene3D G3DSA:3.20.20.450 49 195 1.0E-17 T 14-10-2018 IPR035919 EAL domain superfamily D172_013230 c3a15a735e2349e06ffc071cfa7ad1cc 408 Pfam PF00563 EAL domain 82 191 3.4E-11 T 14-10-2018 IPR001633 EAL domain D172_013230 c3a15a735e2349e06ffc071cfa7ad1cc 408 Pfam PF08668 HDOD domain 199 321 1.2E-16 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD D172_009250 f60c114aa6089b2fa39632e24f4fe1e1 486 SUPERFAMILY SSF46689 376 425 1.43E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_009250 f60c114aa6089b2fa39632e24f4fe1e1 486 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 442 457 5.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D172_009250 f60c114aa6089b2fa39632e24f4fe1e1 486 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 457 473 5.2E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D172_009250 f60c114aa6089b2fa39632e24f4fe1e1 486 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 429 469 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D172_009250 f60c114aa6089b2fa39632e24f4fe1e1 486 Pfam PF12833 Helix-turn-helix domain 400 474 1.9E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_009250 f60c114aa6089b2fa39632e24f4fe1e1 486 SMART SM00342 392 473 1.6E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_009250 f60c114aa6089b2fa39632e24f4fe1e1 486 Gene3D G3DSA:1.10.10.60 374 425 1.6E-9 T 14-10-2018 D172_009250 f60c114aa6089b2fa39632e24f4fe1e1 486 SUPERFAMILY SSF46689 428 477 4.03E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_009250 f60c114aa6089b2fa39632e24f4fe1e1 486 Gene3D G3DSA:1.10.10.60 426 480 1.7E-15 T 14-10-2018 D172_015075 00bb1b73899ebfb08e363f8b7c435ff5 338 Gene3D G3DSA:3.40.50.720 3 274 1.4E-141 T 14-10-2018 D172_015075 00bb1b73899ebfb08e363f8b7c435ff5 338 SUPERFAMILY SSF51735 1 337 6.75E-100 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_015075 00bb1b73899ebfb08e363f8b7c435ff5 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 4.4E-63 T 14-10-2018 IPR016040 NAD(P)-binding domain D172_015075 00bb1b73899ebfb08e363f8b7c435ff5 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 335 4.9E-141 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 D172_015075 00bb1b73899ebfb08e363f8b7c435ff5 338 Gene3D G3DSA:3.90.25.10 194 329 1.4E-141 T 14-10-2018 D172_015750 059627b69ff6667b593793205f0fc5f8 347 Pfam PF06723 MreB/Mbl protein 11 337 1.3E-146 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D172_015750 059627b69ff6667b593793205f0fc5f8 347 Gene3D G3DSA:3.90.640.10 190 263 5.1E-129 T 14-10-2018 D172_015750 059627b69ff6667b593793205f0fc5f8 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 3.1E-65 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D172_015750 059627b69ff6667b593793205f0fc5f8 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 3.1E-65 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D172_015750 059627b69ff6667b593793205f0fc5f8 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 3.1E-65 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D172_015750 059627b69ff6667b593793205f0fc5f8 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 3.1E-65 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D172_015750 059627b69ff6667b593793205f0fc5f8 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 3.1E-65 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D172_015750 059627b69ff6667b593793205f0fc5f8 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 3.6E-163 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 D172_015750 059627b69ff6667b593793205f0fc5f8 347 SUPERFAMILY SSF53067 9 152 3.35E-37 T 14-10-2018 D172_015750 059627b69ff6667b593793205f0fc5f8 347 SUPERFAMILY SSF53067 153 340 8.76E-51 T 14-10-2018 D172_015750 059627b69ff6667b593793205f0fc5f8 347 Gene3D G3DSA:3.30.420.40 14 331 5.1E-129 T 14-10-2018 D172_015750 059627b69ff6667b593793205f0fc5f8 347 Gene3D G3DSA:3.30.420.40 158 321 5.1E-129 T 14-10-2018 D172_003285 562ae34f35505eae8466595680a00704 436 Pfam PF07690 Major Facilitator Superfamily 12 348 5.5E-21 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_003285 562ae34f35505eae8466595680a00704 436 SUPERFAMILY SSF103473 9 418 1.07E-44 T 14-10-2018 IPR036259 MFS transporter superfamily D172_003285 562ae34f35505eae8466595680a00704 436 Gene3D G3DSA:1.20.1250.20 4 403 1.0E-39 T 14-10-2018 D172_010115 4fd0fd7602dcfca93752ecc94217559a 191 SUPERFAMILY SSF101874 23 191 3.92E-53 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily D172_010115 4fd0fd7602dcfca93752ecc94217559a 191 Gene3D G3DSA:2.40.128.110 24 191 3.7E-52 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily D172_010115 4fd0fd7602dcfca93752ecc94217559a 191 SMART SM00867 25 189 3.8E-67 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like D172_010115 4fd0fd7602dcfca93752ecc94217559a 191 Pfam PF04264 YceI-like domain 26 183 1.5E-38 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like D172_002290 93c9b5683ce61b33b8400ec461a57ed3 162 Gene3D G3DSA:1.20.120.1490 44 162 1.8E-22 T 14-10-2018 D172_002290 93c9b5683ce61b33b8400ec461a57ed3 162 Pfam PF07813 LTXXQ motif family protein 50 148 1.8E-9 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 D172_002290 93c9b5683ce61b33b8400ec461a57ed3 162 PIRSF PIRSF034445 6 160 2.1E-18 T 14-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 D172_008185 07ddb17e6b5d134f7fa8057aed2d9303 152 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 91 108 - T 14-10-2018 IPR000614 Free Met sulfoxide reductase conserved site D172_008185 07ddb17e6b5d134f7fa8057aed2d9303 152 SUPERFAMILY SSF55781 1 146 3.92E-42 T 14-10-2018 D172_008185 07ddb17e6b5d134f7fa8057aed2d9303 152 Gene3D G3DSA:3.30.450.40 1 152 9.2E-67 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_008185 07ddb17e6b5d134f7fa8057aed2d9303 152 Pfam PF13185 GAF domain 40 144 6.1E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 D172_002685 b923cd85456a0c563cad6202466abd54 199 Hamap MF_01405 dITP/XTP pyrophosphatase. 3 195 48.88 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 D172_002685 b923cd85456a0c563cad6202466abd54 199 SUPERFAMILY SSF52972 2 192 1.96E-70 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D172_002685 b923cd85456a0c563cad6202466abd54 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 190 7.5E-62 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 D172_002685 b923cd85456a0c563cad6202466abd54 199 Pfam PF01725 Ham1 family 5 190 6.5E-56 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 D172_002685 b923cd85456a0c563cad6202466abd54 199 Gene3D G3DSA:3.90.950.10 1 198 1.7E-75 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D172_001955 3310c4f96ba0e962f07cfb26d54a17e5 549 Gene3D G3DSA:1.10.3720.10 277 543 3.2E-29 T 14-10-2018 IPR035906 MetI-like superfamily D172_001955 3310c4f96ba0e962f07cfb26d54a17e5 549 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 317 545 1.1E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D172_001955 3310c4f96ba0e962f07cfb26d54a17e5 549 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 274 541 1.2E-75 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 D172_001955 3310c4f96ba0e962f07cfb26d54a17e5 549 SUPERFAMILY SSF161098 252 531 2.09E-34 T 14-10-2018 IPR035906 MetI-like superfamily D172_004905 c978f9361717e3e017f9eedda5ec6f29 447 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 257 2.7E-115 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 D172_004905 c978f9361717e3e017f9eedda5ec6f29 447 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 447 46.758 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 D172_004905 c978f9361717e3e017f9eedda5ec6f29 447 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 447 4.3E-189 T 14-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 D172_004905 c978f9361717e3e017f9eedda5ec6f29 447 Pfam PF11973 NQRA C-terminal domain 262 310 1.5E-21 T 14-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 D172_007955 4718b936ec5c4937340a163495f72259 176 Pfam PF02371 Transposase IS116/IS110/IS902 family 91 169 5.6E-17 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D172_020435 8dbef585ce9351ca763b2ae2f64cc220 111 Pfam PF11804 Protein of unknown function (DUF3325) 4 99 1.7E-16 T 14-10-2018 IPR021762 Protein of unknown function DUF3325 D172_008315 68ae8212b91ff3dbf6925611db8209bf 138 Gene3D G3DSA:3.90.1010.10 1 137 1.4E-42 T 14-10-2018 D172_008315 68ae8212b91ff3dbf6925611db8209bf 138 SUPERFAMILY SSF82649 2 135 5.75E-40 T 14-10-2018 D172_008315 68ae8212b91ff3dbf6925611db8209bf 138 Pfam PF02657 Fe-S metabolism associated domain 10 131 1.9E-38 T 14-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like D172_008120 e284e1871b31f4e22d236e2e94a34bb7 145 Gene3D G3DSA:3.90.79.10 1 145 8.2E-34 T 14-10-2018 D172_008120 e284e1871b31f4e22d236e2e94a34bb7 145 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D172_008120 e284e1871b31f4e22d236e2e94a34bb7 145 Pfam PF00293 NUDIX domain 3 118 2.6E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D172_008120 e284e1871b31f4e22d236e2e94a34bb7 145 SUPERFAMILY SSF55811 2 135 1.15E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D172_001460 869ff1784a249a84745ea82a19ff8dcd 371 Gene3D G3DSA:2.40.30.170 56 277 5.8E-48 T 14-10-2018 D172_001460 869ff1784a249a84745ea82a19ff8dcd 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 347 1.0E-48 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D172_001460 869ff1784a249a84745ea82a19ff8dcd 371 Gene3D G3DSA:2.40.420.20 278 347 5.8E-48 T 14-10-2018 D172_001460 869ff1784a249a84745ea82a19ff8dcd 371 Pfam PF13437 HlyD family secretion protein 163 258 6.5E-10 T 14-10-2018 D172_001460 869ff1784a249a84745ea82a19ff8dcd 371 SUPERFAMILY SSF111369 56 274 3.4E-23 T 14-10-2018 D172_001460 869ff1784a249a84745ea82a19ff8dcd 371 Gene3D G3DSA:1.10.287.470 101 160 5.8E-48 T 14-10-2018 D172_001460 869ff1784a249a84745ea82a19ff8dcd 371 Gene3D G3DSA:2.40.50.100 66 194 5.8E-48 T 14-10-2018 D172_018845 c90ee3f1904930bf74d5c5b6c6ed1385 881 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 538 550 - T 14-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D172_018845 c90ee3f1904930bf74d5c5b6c6ed1385 881 Pfam PF00311 Phosphoenolpyruvate carboxylase 133 881 3.7E-274 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D172_018845 c90ee3f1904930bf74d5c5b6c6ed1385 881 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 881 17.765 T 14-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D172_018845 c90ee3f1904930bf74d5c5b6c6ed1385 881 SUPERFAMILY SSF51621 6 881 6.75E-303 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D172_018845 c90ee3f1904930bf74d5c5b6c6ed1385 881 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 137 150 4.1E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D172_018845 c90ee3f1904930bf74d5c5b6c6ed1385 881 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 536 556 4.1E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D172_018845 c90ee3f1904930bf74d5c5b6c6ed1385 881 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 387 407 4.1E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D172_018845 c90ee3f1904930bf74d5c5b6c6ed1385 881 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 190 206 4.1E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D172_018845 c90ee3f1904930bf74d5c5b6c6ed1385 881 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 249 264 4.1E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D172_018845 c90ee3f1904930bf74d5c5b6c6ed1385 881 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 710 736 4.1E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D172_018845 c90ee3f1904930bf74d5c5b6c6ed1385 881 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 578 607 4.1E-67 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D172_018845 c90ee3f1904930bf74d5c5b6c6ed1385 881 Gene3D G3DSA:1.20.1440.90 277 390 4.3E-20 T 14-10-2018 D172_018845 c90ee3f1904930bf74d5c5b6c6ed1385 881 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 138 149 - T 14-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 D172_010785 75c853aef42b53e207ef9c9b08a54e99 87 Pfam PF03692 Putative zinc- or iron-chelating domain 8 65 1.1E-5 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein D172_003575 4f743b314cd7649607a523b3fa4d4a71 675 Gene3D G3DSA:3.40.50.300 3 157 1.1E-15 T 14-10-2018 D172_003575 4f743b314cd7649607a523b3fa4d4a71 675 SUPERFAMILY SSF52540 8 654 1.58E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_003575 4f743b314cd7649607a523b3fa4d4a71 675 Gene3D G3DSA:3.40.50.300 190 314 1.0E-15 T 14-10-2018 D172_003575 4f743b314cd7649607a523b3fa4d4a71 675 Gene3D G3DSA:3.40.50.300 479 659 1.7E-6 T 14-10-2018 D172_003575 4f743b314cd7649607a523b3fa4d4a71 675 Pfam PF13245 AAA domain 8 275 2.8E-19 T 14-10-2018 D172_013830 448e387b6408ff05bf9c70a9e13aeb9f 160 SUPERFAMILY SSF54909 72 153 1.74E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel D172_013830 448e387b6408ff05bf9c70a9e13aeb9f 160 Pfam PF01037 Lrp/AsnC ligand binding domain 76 148 3.9E-17 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain D172_013830 448e387b6408ff05bf9c70a9e13aeb9f 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 1.2E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_013830 448e387b6408ff05bf9c70a9e13aeb9f 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 1.2E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_013830 448e387b6408ff05bf9c70a9e13aeb9f 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 1.2E-17 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 D172_013830 448e387b6408ff05bf9c70a9e13aeb9f 160 Gene3D G3DSA:3.30.70.920 61 156 1.1E-20 T 14-10-2018 D172_013830 448e387b6408ff05bf9c70a9e13aeb9f 160 SMART SM00344 10 119 1.4E-38 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 D172_013830 448e387b6408ff05bf9c70a9e13aeb9f 160 SUPERFAMILY SSF46785 9 68 2.38E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_013830 448e387b6408ff05bf9c70a9e13aeb9f 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 57 1.5E-20 T 14-10-2018 D172_013830 448e387b6408ff05bf9c70a9e13aeb9f 160 ProSitePatterns PS00519 AsnC-type HTH domain signature. 28 54 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site D172_013830 448e387b6408ff05bf9c70a9e13aeb9f 160 Gene3D G3DSA:1.10.10.10 11 60 1.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_001865 948d0eefade80bb9673c81fa9b333703 162 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 137 5.3E-12 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D172_001865 948d0eefade80bb9673c81fa9b333703 162 Gene3D G3DSA:3.10.50.40 3 153 1.3E-50 T 14-10-2018 D172_001865 948d0eefade80bb9673c81fa9b333703 162 SUPERFAMILY SSF54534 2 140 1.02E-30 T 14-10-2018 D172_001865 948d0eefade80bb9673c81fa9b333703 162 Gene3D G3DSA:2.40.10.330 70 121 1.3E-50 T 14-10-2018 D172_014065 cbb91bd55792a9d54fa04872b5266d82 206 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 105 193 2.3E-21 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 D172_014065 cbb91bd55792a9d54fa04872b5266d82 206 Gene3D G3DSA:2.60.120.620 7 198 1.5E-43 T 14-10-2018 D172_014065 cbb91bd55792a9d54fa04872b5266d82 206 SMART SM00702 17 193 1.5E-22 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 D172_016615 cb3399069673fcf17a50883834a342f6 496 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 416 480 1.2E-8 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial D172_016615 cb3399069673fcf17a50883834a342f6 496 Gene3D G3DSA:2.60.120.380 397 495 2.3E-27 T 14-10-2018 D172_016615 cb3399069673fcf17a50883834a342f6 496 SUPERFAMILY SSF55486 191 367 1.16E-10 T 14-10-2018 D172_016615 cb3399069673fcf17a50883834a342f6 496 Pfam PF13688 Metallo-peptidase family M12 173 354 3.4E-14 T 14-10-2018 D172_014925 4c033a8fad58a1547c475eafeab2489b 259 Gene3D G3DSA:3.40.50.11690 121 250 6.2E-41 T 14-10-2018 D172_014925 4c033a8fad58a1547c475eafeab2489b 259 Pfam PF08478 POTRA domain, FtsQ-type 52 119 7.9E-19 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type D172_014925 4c033a8fad58a1547c475eafeab2489b 259 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 20 244 19.686 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 D172_014925 4c033a8fad58a1547c475eafeab2489b 259 Pfam PF03799 Cell division protein FtsQ 123 236 5.0E-25 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB D172_014925 4c033a8fad58a1547c475eafeab2489b 259 Gene3D G3DSA:3.10.20.310 52 119 2.0E-22 T 14-10-2018 D172_019905 0dea4e6f1f0393b26e9bd8ef0bcda8fc 613 Pfam PF05960 Bacterial protein of unknown function (DUF885) 70 605 2.3E-163 T 14-10-2018 IPR010281 Protein of unknown function DUF885 D172_019975 2a0f86ce1e9b2e098eb8c77f0924cce6 877 Gene3D G3DSA:2.170.130.10 28 159 1.6E-5 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_019975 2a0f86ce1e9b2e098eb8c77f0924cce6 877 Gene3D G3DSA:2.40.170.20 411 877 4.8E-27 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_019975 2a0f86ce1e9b2e098eb8c77f0924cce6 877 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 153 2.2E-5 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_019975 2a0f86ce1e9b2e098eb8c77f0924cce6 877 SUPERFAMILY SSF56935 37 877 8.9E-61 T 14-10-2018 D172_003130 53dbf94866c0f983893550ba40187307 650 Pfam PF13667 ThiC-associated domain 28 110 5.9E-34 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 D172_003130 53dbf94866c0f983893550ba40187307 650 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 149 602 100.103 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 D172_003130 53dbf94866c0f983893550ba40187307 650 Gene3D G3DSA:3.20.20.540 220 533 2.1E-154 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 D172_003130 53dbf94866c0f983893550ba40187307 650 Pfam PF01964 Radical SAM ThiC family 150 598 6.6E-200 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 D172_003130 53dbf94866c0f983893550ba40187307 650 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 149 601 3.6E-220 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 D172_019945 7b3d14fb9ef004de2355e6c5d165bc09 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 336 439 5.9E-30 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel D172_019945 7b3d14fb9ef004de2355e6c5d165bc09 455 PIRSF PIRSF037714 3 455 1.2E-173 T 14-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein D172_019900 7abe6860e0aefb4880067d5c4efcabb6 425 Gene3D G3DSA:3.20.20.140 82 383 7.9E-143 T 14-10-2018 D172_019900 7abe6860e0aefb4880067d5c4efcabb6 425 Pfam PF01979 Amidohydrolase family 76 417 1.8E-53 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 D172_019900 7abe6860e0aefb4880067d5c4efcabb6 425 SUPERFAMILY SSF51556 80 381 5.67E-104 T 14-10-2018 IPR032466 Metal-dependent hydrolase D172_019900 7abe6860e0aefb4880067d5c4efcabb6 425 Gene3D G3DSA:2.30.40.10 33 421 7.9E-143 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D172_019900 7abe6860e0aefb4880067d5c4efcabb6 425 SUPERFAMILY SSF51338 35 89 8.64E-10 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D172_020320 725a75761c0d4775cd07a39ba3111b53 233 SMART SM00953 62 213 2.1E-5 T 14-10-2018 IPR014914 RES domain D172_020320 725a75761c0d4775cd07a39ba3111b53 233 Pfam PF08808 RES domain 65 209 2.3E-20 T 14-10-2018 IPR014914 RES domain D172_000810 d2e849e264ade6ba60cfa85f656957c9 237 Gene3D G3DSA:2.40.30.10 2 99 5.7E-19 T 14-10-2018 D172_000810 d2e849e264ade6ba60cfa85f656957c9 237 SUPERFAMILY SSF52343 107 234 6.68E-34 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D172_000810 d2e849e264ade6ba60cfa85f656957c9 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 3.2E-21 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D172_000810 d2e849e264ade6ba60cfa85f656957c9 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 1.1E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D172_000810 d2e849e264ade6ba60cfa85f656957c9 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 1.1E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D172_000810 d2e849e264ade6ba60cfa85f656957c9 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 1.1E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D172_000810 d2e849e264ade6ba60cfa85f656957c9 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 1.1E-11 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 D172_000810 d2e849e264ade6ba60cfa85f656957c9 237 SUPERFAMILY SSF63380 3 75 4.3E-13 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D172_000810 d2e849e264ade6ba60cfa85f656957c9 237 Gene3D G3DSA:3.40.50.80 105 236 6.4E-26 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D172_007680 f01bffed4a283fa23e71f5ccbec48291 1236 SUPERFAMILY SSF56935 43 1236 2.72E-78 T 14-10-2018 D172_007680 f01bffed4a283fa23e71f5ccbec48291 1236 Gene3D G3DSA:2.170.130.10 50 176 2.0E-12 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_007680 f01bffed4a283fa23e71f5ccbec48291 1236 Gene3D G3DSA:2.40.170.20 837 1236 1.6E-41 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_007680 f01bffed4a283fa23e71f5ccbec48291 1236 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 43 1236 2.7E-161 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_007680 f01bffed4a283fa23e71f5ccbec48291 1236 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 171 1.1E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_007680 f01bffed4a283fa23e71f5ccbec48291 1236 Pfam PF00593 TonB dependent receptor 540 713 4.8E-4 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_007680 f01bffed4a283fa23e71f5ccbec48291 1236 Pfam PF00593 TonB dependent receptor 860 1233 6.7E-32 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_017085 cb041ccc33bcfa85dab146a318cf081f 234 Pfam PF03591 AzlC protein 17 157 2.8E-37 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease D172_011180 0f1e30f549f555e6fb8e127c68fa6bc8 346 SUPERFAMILY SSF51735 138 342 4.96E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_011180 0f1e30f549f555e6fb8e127c68fa6bc8 346 SMART SM00839 141 345 5.4E-63 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 D172_011180 0f1e30f549f555e6fb8e127c68fa6bc8 346 SUPERFAMILY SSF53223 4 143 3.07E-44 T 14-10-2018 D172_011180 0f1e30f549f555e6fb8e127c68fa6bc8 346 Gene3D G3DSA:3.40.50.10860 11 342 3.2E-136 T 14-10-2018 D172_011180 0f1e30f549f555e6fb8e127c68fa6bc8 346 PIRSF PIRSF000188 1 345 4.8E-146 T 14-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 D172_011180 0f1e30f549f555e6fb8e127c68fa6bc8 346 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 221 325 4.1E-8 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 D172_011180 0f1e30f549f555e6fb8e127c68fa6bc8 346 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 1.7E-15 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 D172_011180 0f1e30f549f555e6fb8e127c68fa6bc8 346 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 283 294 1.7E-15 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 D172_011180 0f1e30f549f555e6fb8e127c68fa6bc8 346 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 173 193 1.7E-15 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 D172_011180 0f1e30f549f555e6fb8e127c68fa6bc8 346 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 13 131 1.1E-25 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 D172_011180 0f1e30f549f555e6fb8e127c68fa6bc8 346 Gene3D G3DSA:3.40.50.720 134 335 3.2E-136 T 14-10-2018 D172_000685 315342619ee3ba444de1abfc0983a61b 105 Gene3D G3DSA:1.10.3730.20 1 105 1.4E-24 T 14-10-2018 D172_000685 315342619ee3ba444de1abfc0983a61b 105 Pfam PF00893 Small Multidrug Resistance protein 1 94 4.4E-21 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 D172_000685 315342619ee3ba444de1abfc0983a61b 105 SUPERFAMILY SSF103481 5 104 1.7E-15 T 14-10-2018 D172_015905 c5eca9c1496e76b1147bb7c0a971362d 175 SUPERFAMILY SSF110997 97 172 2.09E-18 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D172_015905 c5eca9c1496e76b1147bb7c0a971362d 175 Gene3D G3DSA:3.30.70.1070 93 172 2.3E-27 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D172_015905 c5eca9c1496e76b1147bb7c0a971362d 175 Pfam PF05036 Sporulation related domain 98 165 2.9E-16 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 D172_017490 f88d44f1293f92ada718aa651e2a8f7b 195 Gene3D G3DSA:1.10.357.10 54 173 2.3E-12 T 14-10-2018 D172_017490 f88d44f1293f92ada718aa651e2a8f7b 195 Gene3D G3DSA:1.10.10.60 5 53 6.6E-14 T 14-10-2018 D172_017490 f88d44f1293f92ada718aa651e2a8f7b 195 SUPERFAMILY SSF46689 7 79 1.54E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_017490 f88d44f1293f92ada718aa651e2a8f7b 195 SUPERFAMILY SSF48498 79 170 5.93E-12 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily D172_017490 f88d44f1293f92ada718aa651e2a8f7b 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 56 1.9E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_017490 f88d44f1293f92ada718aa651e2a8f7b 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_017490 f88d44f1293f92ada718aa651e2a8f7b 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.0E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_002965 28dfda2e4b18792e8113c496c71c4eef 148 Gene3D G3DSA:2.40.128.520 29 148 1.7E-19 T 14-10-2018 D172_002965 28dfda2e4b18792e8113c496c71c4eef 148 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 31 146 5.5E-31 T 14-10-2018 IPR019223 Domain of unknown function DUF2147 D172_001800 521fbc7676bcce4eb40c94b68116195e 166 Gene3D G3DSA:3.90.960.10 2 165 5.8E-43 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 D172_001800 521fbc7676bcce4eb40c94b68116195e 166 Pfam PF04073 Aminoacyl-tRNA editing domain 24 150 2.8E-20 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 D172_001800 521fbc7676bcce4eb40c94b68116195e 166 SUPERFAMILY SSF55826 4 163 3.92E-37 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 D172_007080 b3bcb5392af065ddab8a2b89fdbe0ea0 259 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 D172_007080 b3bcb5392af065ddab8a2b89fdbe0ea0 259 Pfam PF01026 TatD related DNase 3 254 5.0E-79 T 14-10-2018 IPR001130 TatD family GO:0016788 D172_007080 b3bcb5392af065ddab8a2b89fdbe0ea0 259 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 D172_007080 b3bcb5392af065ddab8a2b89fdbe0ea0 259 SUPERFAMILY SSF51556 2 256 5.4E-90 T 14-10-2018 IPR032466 Metal-dependent hydrolase D172_007080 b3bcb5392af065ddab8a2b89fdbe0ea0 259 PIRSF PIRSF005902 1 258 1.3E-82 T 14-10-2018 IPR001130 TatD family GO:0016788 D172_007080 b3bcb5392af065ddab8a2b89fdbe0ea0 259 Gene3D G3DSA:3.20.20.140 1 258 2.1E-99 T 14-10-2018 D172_007080 b3bcb5392af065ddab8a2b89fdbe0ea0 259 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 1.0E-92 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 D172_013585 6977eeb4c8e15a67d76594dcf1f4f71b 300 Pfam PF03466 LysR substrate binding domain 87 288 1.1E-37 T 14-10-2018 IPR005119 LysR, substrate-binding D172_013585 6977eeb4c8e15a67d76594dcf1f4f71b 300 SUPERFAMILY SSF46785 1 110 8.61E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_013585 6977eeb4c8e15a67d76594dcf1f4f71b 300 SUPERFAMILY SSF53850 88 288 6.79E-35 T 14-10-2018 D172_013585 6977eeb4c8e15a67d76594dcf1f4f71b 300 Gene3D G3DSA:1.10.10.10 1 85 9.9E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_013585 6977eeb4c8e15a67d76594dcf1f4f71b 300 Gene3D G3DSA:3.40.190.10 91 284 2.9E-51 T 14-10-2018 D172_013585 6977eeb4c8e15a67d76594dcf1f4f71b 300 Gene3D G3DSA:3.40.190.10 161 257 2.9E-51 T 14-10-2018 D172_013585 6977eeb4c8e15a67d76594dcf1f4f71b 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.9E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_013585 6977eeb4c8e15a67d76594dcf1f4f71b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_013585 6977eeb4c8e15a67d76594dcf1f4f71b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_013585 6977eeb4c8e15a67d76594dcf1f4f71b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.8E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_017580 b8a68afd585e7a6b8c9dfe6c1e03af63 161 Pfam PF04965 Gene 25-like lysozyme 37 136 2.8E-17 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD D172_017580 b8a68afd585e7a6b8c9dfe6c1e03af63 161 SUPERFAMILY SSF160719 34 146 8.11E-8 T 14-10-2018 D172_017580 b8a68afd585e7a6b8c9dfe6c1e03af63 161 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 10 150 5.8E-30 T 14-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein D172_002220 9583d2fcc1e7de9a642976a2fd5d3552 379 Gene3D G3DSA:2.70.70.10 238 377 8.8E-35 T 14-10-2018 IPR011055 Duplicated hybrid motif D172_002220 9583d2fcc1e7de9a642976a2fd5d3552 379 Pfam PF01551 Peptidase family M23 279 372 1.9E-23 T 14-10-2018 IPR016047 Peptidase M23 D172_002220 9583d2fcc1e7de9a642976a2fd5d3552 379 SUPERFAMILY SSF51261 183 376 1.31E-42 T 14-10-2018 IPR011055 Duplicated hybrid motif D172_017420 6ed40e6181056d590a467e0117342f15 126 Gene3D G3DSA:3.10.180.10 1 117 3.0E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_017420 6ed40e6181056d590a467e0117342f15 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 107 4.7E-10 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D172_017420 6ed40e6181056d590a467e0117342f15 126 SUPERFAMILY SSF54593 2 110 1.25E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_008480 befa3e68d9a3ab48594ccc225757295e 234 Gene3D G3DSA:3.30.2310.10 154 229 4.8E-21 T 14-10-2018 D172_008480 befa3e68d9a3ab48594ccc225757295e 234 Gene3D G3DSA:2.40.30.70 5 153 1.2E-44 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily D172_008480 befa3e68d9a3ab48594ccc225757295e 234 Pfam PF01980 Uncharacterised protein family UPF0066 21 143 9.7E-41 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain D172_008480 befa3e68d9a3ab48594ccc225757295e 234 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 148 3.3E-43 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain D172_008480 befa3e68d9a3ab48594ccc225757295e 234 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 14-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site D172_008480 befa3e68d9a3ab48594ccc225757295e 234 SUPERFAMILY SSF118196 1 229 3.53E-80 T 14-10-2018 IPR036413 YaeB-like superfamily D172_010205 55f0a4bfa4f2fc9b5c9a18a8ab469990 224 Gene3D G3DSA:3.40.50.2300 1 122 3.4E-40 T 14-10-2018 D172_010205 55f0a4bfa4f2fc9b5c9a18a8ab469990 224 Pfam PF00072 Response regulator receiver domain 3 112 8.6E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_010205 55f0a4bfa4f2fc9b5c9a18a8ab469990 224 SMART SM00448 1 112 3.1E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_010205 55f0a4bfa4f2fc9b5c9a18a8ab469990 224 SUPERFAMILY SSF52172 1 118 4.41E-38 T 14-10-2018 IPR011006 CheY-like superfamily D172_010205 55f0a4bfa4f2fc9b5c9a18a8ab469990 224 SMART SM00862 145 220 5.2E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_010205 55f0a4bfa4f2fc9b5c9a18a8ab469990 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 5.8E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_010205 55f0a4bfa4f2fc9b5c9a18a8ab469990 224 SUPERFAMILY SSF46894 118 220 1.08E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_010205 55f0a4bfa4f2fc9b5c9a18a8ab469990 224 Gene3D G3DSA:1.10.10.10 123 223 6.9E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_011640 748d44f2a32f5858691c21a95e482dee 205 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 203 2.4E-62 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D172_011640 748d44f2a32f5858691c21a95e482dee 205 Gene3D G3DSA:3.20.20.70 1 205 2.2E-60 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_011640 748d44f2a32f5858691c21a95e482dee 205 SUPERFAMILY SSF51569 3 203 3.48E-56 T 14-10-2018 D172_011640 748d44f2a32f5858691c21a95e482dee 205 Pfam PF01081 KDPG and KHG aldolase 8 197 5.9E-60 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D172_005710 d811bb56be0eccf75aa8416cfc848ea8 669 Gene3D G3DSA:3.30.9.10 352 573 1.6E-122 T 14-10-2018 D172_005710 d811bb56be0eccf75aa8416cfc848ea8 669 Gene3D G3DSA:3.40.50.150 5 255 1.1E-84 T 14-10-2018 D172_005710 d811bb56be0eccf75aa8416cfc848ea8 669 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 121 245 3.2E-35 T 14-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 D172_005710 d811bb56be0eccf75aa8416cfc848ea8 669 Pfam PF01266 FAD dependent oxidoreductase 268 635 7.8E-39 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 D172_005710 d811bb56be0eccf75aa8416cfc848ea8 669 SUPERFAMILY SSF51905 267 544 5.18E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_005710 d811bb56be0eccf75aa8416cfc848ea8 669 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 267 666 8.5E-140 T 14-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 D172_005710 d811bb56be0eccf75aa8416cfc848ea8 669 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 3 662 24.659 T 14-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 D172_005710 d811bb56be0eccf75aa8416cfc848ea8 669 Gene3D G3DSA:3.50.50.60 267 664 1.6E-122 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_010940 3cb670fc88bdd1e780e6450da031409c 1485 SUPERFAMILY SSF69336 1212 1464 1.57E-88 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 D172_010940 3cb670fc88bdd1e780e6450da031409c 1485 SUPERFAMILY SSF56235 12 429 1.09E-147 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_010940 3cb670fc88bdd1e780e6450da031409c 1485 Pfam PF04898 Glutamate synthase central domain 457 736 3.2E-105 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 D172_010940 3cb670fc88bdd1e780e6450da031409c 1485 Gene3D G3DSA:2.160.20.60 1197 1467 2.7E-99 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 D172_010940 3cb670fc88bdd1e780e6450da031409c 1485 Gene3D G3DSA:3.20.20.70 483 1170 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_010940 3cb670fc88bdd1e780e6450da031409c 1485 SUPERFAMILY SSF51395 435 1191 1.91E-255 T 14-10-2018 D172_010940 3cb670fc88bdd1e780e6450da031409c 1485 Pfam PF01645 Conserved region in glutamate synthase 792 1155 7.5E-156 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 D172_010940 3cb670fc88bdd1e780e6450da031409c 1485 Gene3D G3DSA:3.20.20.70 430 791 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_010940 3cb670fc88bdd1e780e6450da031409c 1485 Pfam PF00310 Glutamine amidotransferases class-II 12 425 4.7E-172 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain D172_010940 3cb670fc88bdd1e780e6450da031409c 1485 Pfam PF01493 GXGXG motif 1235 1419 7.9E-76 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 D172_010940 3cb670fc88bdd1e780e6450da031409c 1485 Gene3D G3DSA:3.60.20.10 12 545 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_002905 def921f4c4608bd6555b18b0857ad2fd 199 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 27 199 1.8E-66 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 D172_002905 def921f4c4608bd6555b18b0857ad2fd 199 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 31 199 2.7E-55 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 D172_002905 def921f4c4608bd6555b18b0857ad2fd 199 SUPERFAMILY SSF52540 10 199 3.72E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_002905 def921f4c4608bd6555b18b0857ad2fd 199 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 1 24 9.7E-6 T 14-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 D172_002905 def921f4c4608bd6555b18b0857ad2fd 199 PIRSF PIRSF015617 4 199 5.8E-61 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 D172_002905 def921f4c4608bd6555b18b0857ad2fd 199 Gene3D G3DSA:3.40.50.300 9 199 5.1E-66 T 14-10-2018 D172_009335 e50834ac6bffa8d73caa03324fbfee20 779 Gene3D G3DSA:3.20.20.80 234 776 1.7E-192 T 14-10-2018 D172_009335 e50834ac6bffa8d73caa03324fbfee20 779 SUPERFAMILY SSF51445 425 765 9.62E-27 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_009335 e50834ac6bffa8d73caa03324fbfee20 779 Gene3D G3DSA:2.60.120.430 42 232 1.0E-61 T 14-10-2018 D172_012585 cff81237abed25ccc5a6b9dd3f45db75 527 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 1.0E-174 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 D172_012585 cff81237abed25ccc5a6b9dd3f45db75 527 PIRSF PIRSF006446 353 526 1.0E-31 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 D172_012585 cff81237abed25ccc5a6b9dd3f45db75 527 PIRSF PIRSF006446 2 333 1.0E-111 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 D172_005470 56fdf7fafeff2acae624125b5f789762 146 Gene3D G3DSA:3.10.50.40 15 143 1.9E-41 T 14-10-2018 D172_005470 56fdf7fafeff2acae624125b5f789762 146 Gene3D G3DSA:2.40.10.330 74 130 1.9E-41 T 14-10-2018 D172_005470 56fdf7fafeff2acae624125b5f789762 146 SUPERFAMILY SSF54534 7 144 3.34E-33 T 14-10-2018 D172_005470 56fdf7fafeff2acae624125b5f789762 146 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 8 141 3.3E-12 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D172_001805 28c8885a3436847c536aa71e8c09c872 382 Gene3D G3DSA:1.20.1250.20 3 372 2.9E-35 T 14-10-2018 D172_001805 28c8885a3436847c536aa71e8c09c872 382 SUPERFAMILY SSF103473 3 378 4.19E-44 T 14-10-2018 IPR036259 MFS transporter superfamily D172_001805 28c8885a3436847c536aa71e8c09c872 382 Pfam PF07690 Major Facilitator Superfamily 7 308 5.3E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_004895 0d95df10fd6bc41d227834c3689d851a 103 Pfam PF01722 BolA-like protein 12 82 1.2E-28 T 14-10-2018 IPR002634 BolA protein D172_004895 0d95df10fd6bc41d227834c3689d851a 103 Gene3D G3DSA:3.30.300.90 1 87 9.9E-32 T 14-10-2018 D172_004895 0d95df10fd6bc41d227834c3689d851a 103 SUPERFAMILY SSF82657 1 87 1.96E-31 T 14-10-2018 IPR036065 BolA-like superfamily D172_004895 0d95df10fd6bc41d227834c3689d851a 103 PIRSF PIRSF003113 1 98 2.5E-37 T 14-10-2018 IPR002634 BolA protein D172_020780 fd0e531f99efbed62301dbe553287190 245 Gene3D G3DSA:3.40.190.10 35 234 1.1E-23 T 14-10-2018 D172_020780 fd0e531f99efbed62301dbe553287190 245 SMART SM00062 25 245 0.0016 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D172_020780 fd0e531f99efbed62301dbe553287190 245 SUPERFAMILY SSF53850 33 235 8.1E-29 T 14-10-2018 D172_020780 fd0e531f99efbed62301dbe553287190 245 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 237 6.8E-20 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D172_020780 fd0e531f99efbed62301dbe553287190 245 Gene3D G3DSA:3.40.190.10 110 210 1.1E-23 T 14-10-2018 D172_020695 c14c2dd2968f3cd490272b6c8b5f7a9d 226 Gene3D G3DSA:3.40.190.10 17 216 1.2E-17 T 14-10-2018 D172_020695 c14c2dd2968f3cd490272b6c8b5f7a9d 226 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 16 216 7.2E-14 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D172_020695 c14c2dd2968f3cd490272b6c8b5f7a9d 226 SUPERFAMILY SSF53850 7 216 6.18E-22 T 14-10-2018 D172_020695 c14c2dd2968f3cd490272b6c8b5f7a9d 226 Gene3D G3DSA:3.40.190.10 91 188 1.2E-17 T 14-10-2018 D172_000820 7612133df09fd0f875ad548eecd562a4 676 SMART SM00283 414 675 3.8E-48 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_000820 7612133df09fd0f875ad548eecd562a4 676 Gene3D G3DSA:1.10.287.950 347 676 1.2E-64 T 14-10-2018 D172_000820 7612133df09fd0f875ad548eecd562a4 676 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 476 641 1.2E-36 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_000820 7612133df09fd0f875ad548eecd562a4 676 SMART SM00304 347 399 0.0027 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 D172_000820 7612133df09fd0f875ad548eecd562a4 676 SUPERFAMILY SSF58104 367 676 2.09E-65 T 14-10-2018 D172_016565 adec2a3c784ae9ccf510c1ea1bc8b39d 205 SUPERFAMILY SSF52833 37 180 8.54E-41 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_016565 adec2a3c784ae9ccf510c1ea1bc8b39d 205 Gene3D G3DSA:3.40.30.10 32 185 4.6E-42 T 14-10-2018 D172_016565 adec2a3c784ae9ccf510c1ea1bc8b39d 205 Pfam PF02630 SCO1/SenC 37 175 8.6E-31 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_006545 5adecd6d7542219109deaa1476720a82 378 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 175 350 1.9E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_006545 5adecd6d7542219109deaa1476720a82 378 SUPERFAMILY SSF58104 131 376 3.66E-49 T 14-10-2018 D172_006545 5adecd6d7542219109deaa1476720a82 378 Gene3D G3DSA:1.10.287.950 93 378 8.3E-50 T 14-10-2018 D172_006545 5adecd6d7542219109deaa1476720a82 378 SMART SM00283 125 378 8.8E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_003140 1107de6921b837c08948630b626d653f 64 Pfam PF02597 ThiS family 17 64 8.7E-10 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 D172_003140 1107de6921b837c08948630b626d653f 64 SUPERFAMILY SSF54285 2 63 1.45E-13 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp D172_003140 1107de6921b837c08948630b626d653f 64 Gene3D G3DSA:3.10.20.30 1 64 9.3E-17 T 14-10-2018 IPR012675 Beta-grasp domain superfamily D172_003140 1107de6921b837c08948630b626d653f 64 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 64 9.3E-16 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis D172_002930 2071a9f68fdb4604323330c196c2c84d 259 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 256 36.687 T 14-10-2018 IPR005583 Peroxide stress protein YaaA D172_002930 2071a9f68fdb4604323330c196c2c84d 259 Pfam PF03883 Peroxide stress protein YaaA 1 243 1.1E-91 T 14-10-2018 IPR005583 Peroxide stress protein YaaA D172_013510 ad30f732e0667c7f3140c2834d0cbcbc 364 Pfam PF02119 Flagellar P-ring protein 23 363 1.4E-133 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D172_013510 ad30f732e0667c7f3140c2834d0cbcbc 364 Hamap MF_00416 Flagellar P-ring protein [flgI]. 5 364 38.012 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D172_013510 ad30f732e0667c7f3140c2834d0cbcbc 364 PRINTS PR01010 Flagellar P-ring protein signature 55 70 1.1E-79 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D172_013510 ad30f732e0667c7f3140c2834d0cbcbc 364 PRINTS PR01010 Flagellar P-ring protein signature 161 179 1.1E-79 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D172_013510 ad30f732e0667c7f3140c2834d0cbcbc 364 PRINTS PR01010 Flagellar P-ring protein signature 38 53 1.1E-79 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D172_013510 ad30f732e0667c7f3140c2834d0cbcbc 364 PRINTS PR01010 Flagellar P-ring protein signature 120 138 1.1E-79 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D172_013510 ad30f732e0667c7f3140c2834d0cbcbc 364 PRINTS PR01010 Flagellar P-ring protein signature 251 263 1.1E-79 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D172_013510 ad30f732e0667c7f3140c2834d0cbcbc 364 PRINTS PR01010 Flagellar P-ring protein signature 103 120 1.1E-79 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D172_013510 ad30f732e0667c7f3140c2834d0cbcbc 364 PRINTS PR01010 Flagellar P-ring protein signature 81 100 1.1E-79 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D172_013510 ad30f732e0667c7f3140c2834d0cbcbc 364 PRINTS PR01010 Flagellar P-ring protein signature 23 38 1.1E-79 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D172_013510 ad30f732e0667c7f3140c2834d0cbcbc 364 PRINTS PR01010 Flagellar P-ring protein signature 187 205 1.1E-79 T 14-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 D172_014695 170fe157e2076713dcea8c604f5ebe50 381 Pfam PF12698 ABC-2 family transporter protein 29 367 1.5E-20 T 14-10-2018 D172_009710 cc2c1e07c81979f0bc0c3032a6165422 99 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 4.7E-19 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family D172_009710 cc2c1e07c81979f0bc0c3032a6165422 99 Gene3D G3DSA:3.30.2310.20 1 96 2.0E-19 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D172_009710 cc2c1e07c81979f0bc0c3032a6165422 99 SUPERFAMILY SSF143011 1 86 3.61E-6 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily D172_012100 df3bbe736d11278a91362d3bb04a46e6 442 Pfam PF01554 MatE 4 164 4.4E-30 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D172_012100 df3bbe736d11278a91362d3bb04a46e6 442 Pfam PF01554 MatE 229 383 1.2E-25 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D172_012100 df3bbe736d11278a91362d3bb04a46e6 442 PIRSF PIRSF006603 1 433 1.9E-91 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D172_012100 df3bbe736d11278a91362d3bb04a46e6 442 TIGRFAM TIGR00797 matE: MATE efflux family protein 4 402 1.0E-71 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D172_008005 02874693ebfb07911fe72d75e6ccc907 235 SUPERFAMILY SSF46894 131 231 3.4E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_008005 02874693ebfb07911fe72d75e6ccc907 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 230 1.1E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_008005 02874693ebfb07911fe72d75e6ccc907 235 Gene3D G3DSA:3.40.50.2300 1 121 6.1E-33 T 14-10-2018 D172_008005 02874693ebfb07911fe72d75e6ccc907 235 Gene3D G3DSA:1.10.10.10 122 235 6.4E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_008005 02874693ebfb07911fe72d75e6ccc907 235 SUPERFAMILY SSF52172 2 125 6.97E-37 T 14-10-2018 IPR011006 CheY-like superfamily D172_008005 02874693ebfb07911fe72d75e6ccc907 235 SMART SM00448 3 113 2.4E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_008005 02874693ebfb07911fe72d75e6ccc907 235 Pfam PF00072 Response regulator receiver domain 5 113 6.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_008005 02874693ebfb07911fe72d75e6ccc907 235 SMART SM00862 154 230 1.9E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_004565 160101c0418171b6bcfc220f858ef06b 151 SUPERFAMILY SSF55729 1 150 3.42E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_004565 160101c0418171b6bcfc220f858ef06b 151 Pfam PF00583 Acetyltransferase (GNAT) family 43 129 1.7E-10 T 14-10-2018 IPR000182 GNAT domain D172_004565 160101c0418171b6bcfc220f858ef06b 151 Gene3D G3DSA:3.40.630.30 1 151 2.9E-34 T 14-10-2018 D172_005820 9a3ffcef0dbcceeaf6bfff3ab3f16fc3 117 Gene3D G3DSA:3.30.1330.40 1 117 4.2E-40 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 D172_005820 9a3ffcef0dbcceeaf6bfff3ab3f16fc3 117 Pfam PF01042 Endoribonuclease L-PSP 4 114 1.9E-25 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 D172_005820 9a3ffcef0dbcceeaf6bfff3ab3f16fc3 117 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 91 109 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 D172_005820 9a3ffcef0dbcceeaf6bfff3ab3f16fc3 117 SUPERFAMILY SSF55298 2 116 4.4E-32 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 D172_019120 0c3d2c0b3d54ffc8af21cd3c3a63c4b3 470 Gene3D G3DSA:1.20.1600.10 60 461 2.4E-77 T 14-10-2018 D172_019120 0c3d2c0b3d54ffc8af21cd3c3a63c4b3 470 Gene3D G3DSA:2.20.200.10 107 349 2.4E-77 T 14-10-2018 D172_019120 0c3d2c0b3d54ffc8af21cd3c3a63c4b3 470 Pfam PF02321 Outer membrane efflux protein 280 455 4.7E-16 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D172_019120 0c3d2c0b3d54ffc8af21cd3c3a63c4b3 470 Pfam PF02321 Outer membrane efflux protein 70 251 4.0E-18 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D172_019120 0c3d2c0b3d54ffc8af21cd3c3a63c4b3 470 SUPERFAMILY SSF56954 9 461 7.85E-64 T 14-10-2018 D172_007375 a871269b1f2c05fc535057190b9a1486 486 SUPERFAMILY SSF52172 140 264 7.12E-21 T 14-10-2018 IPR011006 CheY-like superfamily D172_007375 a871269b1f2c05fc535057190b9a1486 486 Gene3D G3DSA:3.30.565.10 9 135 3.5E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_007375 a871269b1f2c05fc535057190b9a1486 486 Pfam PF00072 Response regulator receiver domain 143 253 2.5E-13 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_007375 a871269b1f2c05fc535057190b9a1486 486 Gene3D G3DSA:3.60.40.10 292 486 1.1E-31 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D172_007375 a871269b1f2c05fc535057190b9a1486 486 SUPERFAMILY SSF81606 295 485 2.35E-9 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D172_007375 a871269b1f2c05fc535057190b9a1486 486 Pfam PF13581 Histidine kinase-like ATPase domain 16 127 6.0E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_007375 a871269b1f2c05fc535057190b9a1486 486 SMART SM00331 278 485 9.7E-10 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D172_007375 a871269b1f2c05fc535057190b9a1486 486 SMART SM00448 141 253 9.2E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_007375 a871269b1f2c05fc535057190b9a1486 486 Gene3D G3DSA:3.40.50.2300 136 267 4.9E-20 T 14-10-2018 D172_007375 a871269b1f2c05fc535057190b9a1486 486 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 304 485 1.5E-29 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 D172_004880 f98e14923b72b0fb7ae18d8482043381 184 Pfam PF03923 Uncharacterized lipoprotein 34 182 7.4E-34 T 14-10-2018 IPR005619 Uncharacterised protein family, YajG D172_006135 9f8439875d23415b8abfbeda3020a4d0 456 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 36 407 3.9E-129 T 14-10-2018 IPR020010 Conserved hypothetical protein CHP03503 D172_011170 32b145dacbe89a4264889d07643f517e 274 Gene3D G3DSA:1.10.472.150 42 162 1.1E-37 T 14-10-2018 D172_011170 32b145dacbe89a4264889d07643f517e 274 Gene3D G3DSA:3.40.390.10 166 274 7.0E-33 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 D172_011170 32b145dacbe89a4264889d07643f517e 274 SUPERFAMILY SSF55486 58 269 1.32E-55 T 14-10-2018 D172_011170 32b145dacbe89a4264889d07643f517e 274 Pfam PF06167 Glucose-regulated metallo-peptidase M90 30 267 1.9E-79 T 14-10-2018 IPR010384 MtfA family D172_001155 5ddcdad86427dc209bb6a3cd8eb2b4b6 176 Pfam PF13511 Domain of unknown function (DUF4124) 20 50 1.7E-6 T 14-10-2018 IPR025392 Domain of unknown function DUF4124 D172_002620 5caf645a3d2c82640f5d7b8921732448 126 Pfam PF11399 Protein of unknown function (DUF3192) 17 121 2.0E-32 T 14-10-2018 IPR021534 Protein of unknown function DUF3192 D172_002455 816a7ac793a95c9282f1e5f1c3e6b8b7 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 5.9E-25 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_002455 816a7ac793a95c9282f1e5f1c3e6b8b7 78 Pfam PF00830 Ribosomal L28 family 3 62 3.3E-24 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002455 816a7ac793a95c9282f1e5f1c3e6b8b7 78 Gene3D G3DSA:2.30.170.40 2 78 5.4E-31 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002455 816a7ac793a95c9282f1e5f1c3e6b8b7 78 SUPERFAMILY SSF143800 2 77 1.88E-28 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002455 816a7ac793a95c9282f1e5f1c3e6b8b7 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 19.941 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_016495 0d5e2d210b6389fb0981095bfda86609 225 Pfam PF00156 Phosphoribosyl transferase domain 173 220 1.3E-9 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 D172_016495 0d5e2d210b6389fb0981095bfda86609 225 SUPERFAMILY SSF53271 60 222 4.33E-24 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like D172_016495 0d5e2d210b6389fb0981095bfda86609 225 Gene3D G3DSA:3.40.50.2020 76 224 3.1E-16 T 14-10-2018 D172_009435 ed5fe0bf168f2edcfef470f0704e1ef6 640 Gene3D G3DSA:2.60.120.1200 519 638 4.6E-41 T 14-10-2018 D172_009435 ed5fe0bf168f2edcfef470f0704e1ef6 640 Gene3D G3DSA:2.60.40.1180 407 515 2.7E-16 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta D172_009435 ed5fe0bf168f2edcfef470f0704e1ef6 640 SUPERFAMILY SSF51445 142 347 6.67E-18 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_001490 7320dc60faf75c8c0dba7fecf4ef905e 214 SUPERFAMILY SSF53271 3 207 1.02E-52 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like D172_001490 7320dc60faf75c8c0dba7fecf4ef905e 214 Gene3D G3DSA:3.40.50.2020 1 209 2.7E-76 T 14-10-2018 D172_001490 7320dc60faf75c8c0dba7fecf4ef905e 214 Pfam PF14681 Uracil phosphoribosyltransferase 5 208 1.1E-66 T 14-10-2018 D172_018325 4dfd5b827d568215c606270fb58b6c71 280 SUPERFAMILY SSF51182 6 264 8.77E-104 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily D172_018325 4dfd5b827d568215c606270fb58b6c71 280 PIRSF PIRSF006625 5 280 4.0E-129 T 14-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 D172_018325 4dfd5b827d568215c606270fb58b6c71 280 Pfam PF04962 KduI/IolB family 52 270 4.0E-35 T 14-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 D172_018325 4dfd5b827d568215c606270fb58b6c71 280 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 5 280 53.178 T 14-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 D172_018325 4dfd5b827d568215c606270fb58b6c71 280 Gene3D G3DSA:2.60.120.520 34 146 1.1E-115 T 14-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 D172_018325 4dfd5b827d568215c606270fb58b6c71 280 Gene3D G3DSA:2.60.120.10 14 265 1.1E-115 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_016140 fb649e8eebf4911a2e9b7377942f5132 478 SMART SM00388 256 322 5.1E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_016140 fb649e8eebf4911a2e9b7377942f5132 478 SUPERFAMILY SSF55874 311 477 9.04E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_016140 fb649e8eebf4911a2e9b7377942f5132 478 Gene3D G3DSA:3.30.565.10 325 476 6.5E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_016140 fb649e8eebf4911a2e9b7377942f5132 478 SMART SM00387 367 478 3.7E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_016140 fb649e8eebf4911a2e9b7377942f5132 478 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 319 1.1E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 D172_016140 fb649e8eebf4911a2e9b7377942f5132 478 SUPERFAMILY SSF47384 241 321 1.02E-10 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_016140 fb649e8eebf4911a2e9b7377942f5132 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 477 1.0E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_016140 fb649e8eebf4911a2e9b7377942f5132 478 Gene3D G3DSA:1.10.287.130 206 323 1.7E-12 T 14-10-2018 D172_009035 9868afa80afa5aecd5040a032ef0f5ec 535 Pfam PF01039 Carboxyl transferase domain 49 525 1.9E-153 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 D172_009035 9868afa80afa5aecd5040a032ef0f5ec 535 Gene3D G3DSA:3.90.226.10 1 271 5.9E-94 T 14-10-2018 D172_009035 9868afa80afa5aecd5040a032ef0f5ec 535 SUPERFAMILY SSF52096 237 517 2.84E-87 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_009035 9868afa80afa5aecd5040a032ef0f5ec 535 SUPERFAMILY SSF52096 20 267 1.07E-71 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_009035 9868afa80afa5aecd5040a032ef0f5ec 535 Gene3D G3DSA:3.90.226.10 273 535 5.1E-104 T 14-10-2018 D172_013295 a9de44c618f5f40674b65fc7af163f57 133 Pfam PF10975 Protein of unknown function (DUF2802) 63 129 5.9E-23 T 14-10-2018 IPR021244 Protein of unknown function DUF2802 D172_016370 a27f5ae0c1331194d11c6a531e94d3bf 592 SUPERFAMILY SSF52540 344 589 9.4E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_016370 a27f5ae0c1331194d11c6a531e94d3bf 592 Gene3D G3DSA:1.20.1560.10 12 335 1.2E-83 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D172_016370 a27f5ae0c1331194d11c6a531e94d3bf 592 Pfam PF00005 ABC transporter 369 518 1.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_016370 a27f5ae0c1331194d11c6a531e94d3bf 592 Gene3D G3DSA:3.40.50.300 338 591 1.2E-91 T 14-10-2018 D172_016370 a27f5ae0c1331194d11c6a531e94d3bf 592 SMART SM00382 378 564 3.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_016370 a27f5ae0c1331194d11c6a531e94d3bf 592 Pfam PF00664 ABC transporter transmembrane region 31 299 4.6E-49 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D172_016370 a27f5ae0c1331194d11c6a531e94d3bf 592 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_016370 a27f5ae0c1331194d11c6a531e94d3bf 592 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 15 589 6.0E-256 T 14-10-2018 IPR011918 ABC transporter, ATP-binding/permease protein D172_016370 a27f5ae0c1331194d11c6a531e94d3bf 592 SUPERFAMILY SSF90123 19 334 4.19E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D172_000100 7ec19962e43b1aa5837e7b948a991269 217 Pfam PF07238 PilZ domain 109 192 3.2E-9 T 14-10-2018 IPR009875 PilZ domain GO:0035438 D172_000100 7ec19962e43b1aa5837e7b948a991269 217 Pfam PF12945 Flagellar protein YcgR 11 100 2.2E-12 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal D172_000100 7ec19962e43b1aa5837e7b948a991269 217 SUPERFAMILY SSF141371 4 109 1.8E-24 T 14-10-2018 D172_000100 7ec19962e43b1aa5837e7b948a991269 217 Gene3D G3DSA:2.30.110.10 2 108 2.5E-24 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 D172_000100 7ec19962e43b1aa5837e7b948a991269 217 SUPERFAMILY SSF141371 112 193 1.02E-9 T 14-10-2018 D172_000100 7ec19962e43b1aa5837e7b948a991269 217 Gene3D G3DSA:2.40.10.220 109 217 4.7E-9 T 14-10-2018 D172_003985 55037679e7a5a4dd43157889c3258f8c 404 Gene3D G3DSA:1.10.3210.10 4 323 6.9E-65 T 14-10-2018 D172_003985 55037679e7a5a4dd43157889c3258f8c 404 Pfam PF11871 Domain of unknown function (DUF3391) 3 126 1.1E-12 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 D172_003985 55037679e7a5a4dd43157889c3258f8c 404 SUPERFAMILY SSF109604 141 321 1.15E-28 T 14-10-2018 D172_003985 55037679e7a5a4dd43157889c3258f8c 404 SMART SM00471 156 292 8.4E-9 T 14-10-2018 IPR003607 HD/PDEase domain D172_003985 55037679e7a5a4dd43157889c3258f8c 404 Pfam PF13487 HD domain 212 274 7.6E-13 T 14-10-2018 D172_013370 3e8a6574c6ae7004de2242dba8a18040 259 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 254 2.8E-69 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 D172_013370 3e8a6574c6ae7004de2242dba8a18040 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 6.1E-18 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 D172_013370 3e8a6574c6ae7004de2242dba8a18040 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 6.1E-18 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 D172_013370 3e8a6574c6ae7004de2242dba8a18040 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 6.1E-18 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 D172_013370 3e8a6574c6ae7004de2242dba8a18040 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 6.1E-18 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 D172_013370 3e8a6574c6ae7004de2242dba8a18040 259 Pfam PF01311 Bacterial export proteins, family 1 14 244 1.2E-63 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 D172_003400 350d77eb9ea8f2d5462e8b991c503580 281 SUPERFAMILY SSF52540 2 152 5.02E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_003400 350d77eb9ea8f2d5462e8b991c503580 281 Gene3D G3DSA:3.40.50.300 2 167 3.1E-6 T 14-10-2018 D172_003400 350d77eb9ea8f2d5462e8b991c503580 281 PIRSF PIRSF005052 1 281 1.6E-106 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 D172_003400 350d77eb9ea8f2d5462e8b991c503580 281 Pfam PF03668 P-loop ATPase protein family 1 281 3.2E-110 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 D172_003400 350d77eb9ea8f2d5462e8b991c503580 281 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 39.896 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 D172_020935 6c4fb98dfba5a692360be243159e1c35 401 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 18 379 2.3E-94 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 D172_020935 6c4fb98dfba5a692360be243159e1c35 401 SUPERFAMILY SSF53067 17 343 2.98E-14 T 14-10-2018 D172_020935 6c4fb98dfba5a692360be243159e1c35 401 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 17 400 33.212 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 D172_020935 6c4fb98dfba5a692360be243159e1c35 401 Gene3D G3DSA:3.30.420.40 168 360 4.4E-107 T 14-10-2018 D172_020935 6c4fb98dfba5a692360be243159e1c35 401 Gene3D G3DSA:3.30.420.40 24 385 4.4E-107 T 14-10-2018 D172_011245 11473e6d02d960c93f3086ce76a036d8 232 Gene3D G3DSA:3.30.2010.10 131 223 2.7E-18 T 14-10-2018 D172_011245 11473e6d02d960c93f3086ce76a036d8 232 Pfam PF01863 Protein of unknown function DUF45 17 224 5.0E-41 T 14-10-2018 IPR002725 Protein of unknown function DUF45 D172_006515 d632a087f594e765cc1b349d3b75989a 305 Gene3D G3DSA:3.40.630.10 2 305 6.1E-111 T 14-10-2018 D172_006515 d632a087f594e765cc1b349d3b75989a 305 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 77 176 1.1E-6 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 D172_006515 d632a087f594e765cc1b349d3b75989a 305 SUPERFAMILY SSF53187 28 265 8.27E-36 T 14-10-2018 D172_015240 5ff4288592d203842bfa01e134e5263c 388 PIRSF PIRSF500134 338 388 0.098 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 D172_015240 5ff4288592d203842bfa01e134e5263c 388 PIRSF PIRSF500134 1 343 1.2E-120 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 D172_015240 5ff4288592d203842bfa01e134e5263c 388 SMART SM00984 300 387 1.5E-12 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D172_015240 5ff4288592d203842bfa01e134e5263c 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 1.1E-33 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D172_015240 5ff4288592d203842bfa01e134e5263c 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 2.8E-26 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 D172_015240 5ff4288592d203842bfa01e134e5263c 388 SUPERFAMILY SSF51735 1 194 4.8E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_015240 5ff4288592d203842bfa01e134e5263c 388 Gene3D G3DSA:3.40.50.720 1 193 5.9E-61 T 14-10-2018 D172_015240 5ff4288592d203842bfa01e134e5263c 388 PIRSF PIRSF000124 1 388 7.4E-136 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 D172_015240 5ff4288592d203842bfa01e134e5263c 388 SUPERFAMILY SSF52413 283 387 1.57E-27 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 D172_015240 5ff4288592d203842bfa01e134e5263c 388 Gene3D G3DSA:1.20.5.100 194 220 4.5E-20 T 14-10-2018 D172_015240 5ff4288592d203842bfa01e134e5263c 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 1.7E-103 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 D172_015240 5ff4288592d203842bfa01e134e5263c 388 SUPERFAMILY SSF48179 191 287 1.5E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_015240 5ff4288592d203842bfa01e134e5263c 388 Gene3D G3DSA:3.40.50.720 222 388 5.2E-66 T 14-10-2018 D172_013720 e9af12374caaa420453c711ff92c4865 243 Gene3D G3DSA:3.20.20.70 1 243 4.6E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_013720 e9af12374caaa420453c711ff92c4865 243 SUPERFAMILY SSF63892 4 242 1.57E-100 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 D172_013720 e9af12374caaa420453c711ff92c4865 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 3.1E-99 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 D172_013720 e9af12374caaa420453c711ff92c4865 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 129.268 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 D172_013720 e9af12374caaa420453c711ff92c4865 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 3.4E-103 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 D172_013410 d259b97b74fda659effeed86320ca2aa 148 Pfam PF02050 Flagellar FliJ protein 22 141 9.1E-28 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 D172_013410 d259b97b74fda659effeed86320ca2aa 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 4 141 1.2E-25 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 D172_004220 e4f42c03e6b5ae38b99c34ade8708646 78 Pfam PF13202 EF hand 57 71 0.14 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_004220 e4f42c03e6b5ae38b99c34ade8708646 78 Pfam PF13202 EF hand 26 44 0.017 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_004220 e4f42c03e6b5ae38b99c34ade8708646 78 SUPERFAMILY SSF47473 20 76 1.31E-10 T 14-10-2018 IPR011992 EF-hand domain pair D172_004220 e4f42c03e6b5ae38b99c34ade8708646 78 ProSitePatterns PS00018 EF-hand calcium-binding domain. 31 43 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_004220 e4f42c03e6b5ae38b99c34ade8708646 78 Gene3D G3DSA:1.10.238.10 17 77 2.2E-10 T 14-10-2018 D172_004220 e4f42c03e6b5ae38b99c34ade8708646 78 ProSitePatterns PS00018 EF-hand calcium-binding domain. 57 69 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_008515 184b397c6f99db891e1d8673f5ff6a41 144 Gene3D G3DSA:3.40.50.300 1 144 2.2E-29 T 14-10-2018 D172_008515 184b397c6f99db891e1d8673f5ff6a41 144 Pfam PF13671 AAA domain 4 142 2.0E-13 T 14-10-2018 D172_008515 184b397c6f99db891e1d8673f5ff6a41 144 SUPERFAMILY SSF52540 1 128 5.3E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_006845 ffc50f8e93b0bbe337df45aa1f41f285 55 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 48 4.6E-14 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type D172_006845 ffc50f8e93b0bbe337df45aa1f41f285 55 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 4.1E-20 T 14-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type D172_000615 5adbff88805f7ca8a798d4373f163165 241 Gene3D G3DSA:2.60.40.2130 44 191 9.4E-6 T 14-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 D172_017265 f7db9058041cac8695570d86ab47100b 211 Gene3D G3DSA:1.20.120.1630 11 211 1.7E-22 T 14-10-2018 D172_017265 f7db9058041cac8695570d86ab47100b 211 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 168 211 8.0E-11 T 14-10-2018 D172_017265 f7db9058041cac8695570d86ab47100b 211 Pfam PF04191 Phospholipid methyltransferase 101 200 1.1E-11 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 D172_019060 b2d480b4becaee6c5e4f4d577d456740 472 SUPERFAMILY SSF53720 16 445 2.62E-104 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D172_019060 b2d480b4becaee6c5e4f4d577d456740 472 Pfam PF00171 Aldehyde dehydrogenase family 20 441 1.2E-83 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D172_019060 b2d480b4becaee6c5e4f4d577d456740 472 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 216 223 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 D172_019060 b2d480b4becaee6c5e4f4d577d456740 472 PIRSF PIRSF036492 2 471 2.3E-155 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 D172_019060 b2d480b4becaee6c5e4f4d577d456740 472 Gene3D G3DSA:3.40.605.10 20 442 2.2E-149 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D172_019060 b2d480b4becaee6c5e4f4d577d456740 472 Gene3D G3DSA:3.40.309.10 220 422 2.2E-149 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D172_008870 6291bc16b263d1efbc76898ecdb7bc33 143 Pfam PF12975 Domain of unknown function (DUF3859) 5 126 4.7E-47 T 14-10-2018 IPR024331 Domain of unknown function DUF3859 D172_013505 ae7baa9d00d9ade0a7406116436287e3 331 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 12 315 2.2E-87 T 14-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 D172_013505 ae7baa9d00d9ade0a7406116436287e3 331 Gene3D G3DSA:1.10.530.10 173 312 3.5E-45 T 14-10-2018 D172_013505 ae7baa9d00d9ade0a7406116436287e3 331 Pfam PF10135 Rod binding protein 56 107 9.6E-16 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal D172_013505 ae7baa9d00d9ade0a7406116436287e3 331 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 179 317 2.2E-21 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 D172_013505 ae7baa9d00d9ade0a7406116436287e3 331 Gene3D G3DSA:2.10.70.40 207 259 3.5E-45 T 14-10-2018 D172_013505 ae7baa9d00d9ade0a7406116436287e3 331 PRINTS PR01002 Flagellar protein FlgJ signature 212 233 2.5E-29 T 14-10-2018 D172_013505 ae7baa9d00d9ade0a7406116436287e3 331 PRINTS PR01002 Flagellar protein FlgJ signature 299 317 2.5E-29 T 14-10-2018 D172_013505 ae7baa9d00d9ade0a7406116436287e3 331 PRINTS PR01002 Flagellar protein FlgJ signature 34 57 2.5E-29 T 14-10-2018 D172_013505 ae7baa9d00d9ade0a7406116436287e3 331 PRINTS PR01002 Flagellar protein FlgJ signature 192 210 2.5E-29 T 14-10-2018 D172_013505 ae7baa9d00d9ade0a7406116436287e3 331 PRINTS PR01002 Flagellar protein FlgJ signature 256 277 2.5E-29 T 14-10-2018 D172_013505 ae7baa9d00d9ade0a7406116436287e3 331 PRINTS PR01002 Flagellar protein FlgJ signature 234 255 2.5E-29 T 14-10-2018 D172_013505 ae7baa9d00d9ade0a7406116436287e3 331 SMART SM00047 163 320 2.1E-21 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 D172_001410 0d5888b862f02b593b3745cc9bc7e70e 386 Pfam PF08668 HDOD domain 110 259 2.7E-10 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD D172_001410 0d5888b862f02b593b3745cc9bc7e70e 386 SUPERFAMILY SSF109604 111 355 1.88E-13 T 14-10-2018 D172_001410 0d5888b862f02b593b3745cc9bc7e70e 386 Gene3D G3DSA:1.10.3210.10 102 357 1.4E-21 T 14-10-2018 D172_020900 930d7807a432f28e585e2230082b6b91 135 SUPERFAMILY SSF53850 14 132 1.15E-16 T 14-10-2018 D172_020900 930d7807a432f28e585e2230082b6b91 135 Gene3D G3DSA:3.40.190.10 19 134 1.1E-12 T 14-10-2018 D172_004930 4108b96445402ed5dd81b71cc9ce0ecb 409 Pfam PF00970 Oxidoreductase FAD-binding domain 201 268 6.2E-10 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 D172_004930 4108b96445402ed5dd81b71cc9ce0ecb 409 Pfam PF00175 Oxidoreductase NAD-binding domain 279 387 1.9E-18 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 D172_004930 4108b96445402ed5dd81b71cc9ce0ecb 409 Gene3D G3DSA:3.40.50.80 277 395 1.6E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D172_004930 4108b96445402ed5dd81b71cc9ce0ecb 409 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 47 116 2.2E-9 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 D172_004930 4108b96445402ed5dd81b71cc9ce0ecb 409 Gene3D G3DSA:2.40.30.10 128 266 1.4E-48 T 14-10-2018 D172_004930 4108b96445402ed5dd81b71cc9ce0ecb 409 SUPERFAMILY SSF52343 259 404 2.23E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain D172_004930 4108b96445402ed5dd81b71cc9ce0ecb 409 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 5 409 2.5E-225 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 D172_004930 4108b96445402ed5dd81b71cc9ce0ecb 409 SUPERFAMILY SSF54292 41 124 1.2E-21 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 D172_004930 4108b96445402ed5dd81b71cc9ce0ecb 409 SUPERFAMILY SSF63380 107 274 1.7E-33 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel D172_004930 4108b96445402ed5dd81b71cc9ce0ecb 409 Gene3D G3DSA:3.10.20.30 36 127 6.0E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily D172_004930 4108b96445402ed5dd81b71cc9ce0ecb 409 PIRSF PIRSF000044 1 409 7.0E-212 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 D172_004930 4108b96445402ed5dd81b71cc9ce0ecb 409 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 3 409 61.226 T 14-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 D172_018770 c83992e3d5c3ca9f1c0f74abcf691960 134 Pfam PF14534 Domain of unknown function (DUF4440) 15 116 3.4E-10 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 D172_018770 c83992e3d5c3ca9f1c0f74abcf691960 134 Gene3D G3DSA:3.10.450.50 8 123 2.2E-16 T 14-10-2018 D172_018770 c83992e3d5c3ca9f1c0f74abcf691960 134 SUPERFAMILY SSF54427 9 124 3.94E-18 T 14-10-2018 IPR032710 NTF2-like domain superfamily D172_005230 0b3517ab67138e6ac3a133f433dfd68c 412 Gene3D G3DSA:3.40.50.2300 148 284 8.1E-31 T 14-10-2018 D172_005230 0b3517ab67138e6ac3a133f433dfd68c 412 Pfam PF13458 Periplasmic binding protein 48 367 2.3E-16 T 14-10-2018 IPR028081 Leucine-binding protein domain D172_005230 0b3517ab67138e6ac3a133f433dfd68c 412 SUPERFAMILY SSF53822 45 364 1.21E-27 T 14-10-2018 IPR028082 Periplasmic binding protein-like I D172_005230 0b3517ab67138e6ac3a133f433dfd68c 412 Gene3D G3DSA:3.40.50.2300 47 362 8.1E-31 T 14-10-2018 D172_006355 f33b34ab1e00b6a5a9387901dc61a106 383 Gene3D G3DSA:1.10.3860.10 1 381 6.1E-48 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D172_006355 f33b34ab1e00b6a5a9387901dc61a106 383 PRINTS PR00173 Glutamate-aspartate symporter signature 1 18 6.6E-12 T 14-10-2018 D172_006355 f33b34ab1e00b6a5a9387901dc61a106 383 PRINTS PR00173 Glutamate-aspartate symporter signature 331 351 6.6E-12 T 14-10-2018 D172_006355 f33b34ab1e00b6a5a9387901dc61a106 383 PRINTS PR00173 Glutamate-aspartate symporter signature 39 59 6.6E-12 T 14-10-2018 D172_006355 f33b34ab1e00b6a5a9387901dc61a106 383 PRINTS PR00173 Glutamate-aspartate symporter signature 67 92 6.6E-12 T 14-10-2018 D172_006355 f33b34ab1e00b6a5a9387901dc61a106 383 PRINTS PR00173 Glutamate-aspartate symporter signature 266 292 6.6E-12 T 14-10-2018 D172_006355 f33b34ab1e00b6a5a9387901dc61a106 383 SUPERFAMILY SSF118215 3 377 1.31E-74 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D172_006355 f33b34ab1e00b6a5a9387901dc61a106 383 Pfam PF00375 Sodium:dicarboxylate symporter family 3 376 1.1E-72 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 D172_014025 3d45008d518a31d0520c9f900016d506 162 Gene3D G3DSA:3.30.70.560 1 154 2.1E-37 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D172_014025 3d45008d518a31d0520c9f900016d506 162 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 7.4E-28 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D172_014025 3d45008d518a31d0520c9f900016d506 162 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 2.5E-26 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D172_014025 3d45008d518a31d0520c9f900016d506 162 SUPERFAMILY SSF55083 1 155 1.03E-43 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D172_001205 ecef256d57fe843f80534660e7b5125b 237 Pfam PF01564 Spermine/spermidine synthase domain 86 206 1.7E-7 T 14-10-2018 D172_001205 ecef256d57fe843f80534660e7b5125b 237 Gene3D G3DSA:3.40.50.150 38 236 2.2E-33 T 14-10-2018 D172_001205 ecef256d57fe843f80534660e7b5125b 237 SUPERFAMILY SSF53335 18 235 5.89E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_010190 a1df1437f4e371d32df43b530f7ea148 474 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 1.5E-7 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D172_010190 a1df1437f4e371d32df43b530f7ea148 474 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 89 115 1.5E-7 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D172_010190 a1df1437f4e371d32df43b530f7ea148 474 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 297 317 1.5E-7 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D172_010190 a1df1437f4e371d32df43b530f7ea148 474 Pfam PF00209 Sodium:neurotransmitter symporter family 146 463 7.0E-25 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D172_010190 a1df1437f4e371d32df43b530f7ea148 474 Pfam PF00209 Sodium:neurotransmitter symporter family 5 119 1.8E-22 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 D172_010190 a1df1437f4e371d32df43b530f7ea148 474 SUPERFAMILY SSF161070 5 464 1.44E-110 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 D172_014425 23f486d1275c0678782335395089f344 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 1.7E-41 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D172_014425 23f486d1275c0678782335395089f344 161 SUPERFAMILY SSF55083 1 156 2.22E-51 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D172_014425 23f486d1275c0678782335395089f344 161 Gene3D G3DSA:3.30.70.560 2 159 3.0E-53 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D172_014425 23f486d1275c0678782335395089f344 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 5.0E-34 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 D172_019315 962a868ab552a6c97f8d8ee247686f7d 454 Pfam PF00501 AMP-binding enzyme 124 309 4.9E-13 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_019315 962a868ab552a6c97f8d8ee247686f7d 454 ProSitePatterns PS00455 Putative AMP-binding domain signature. 132 143 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_019315 962a868ab552a6c97f8d8ee247686f7d 454 Gene3D G3DSA:3.40.50.12780 1 338 9.3E-21 T 14-10-2018 D172_019315 962a868ab552a6c97f8d8ee247686f7d 454 SUPERFAMILY SSF56801 19 452 4.71E-43 T 14-10-2018 D172_019315 962a868ab552a6c97f8d8ee247686f7d 454 Gene3D G3DSA:3.30.300.30 344 453 1.6E-10 T 14-10-2018 D172_018290 4672d0205858e55dc06cfa63194106d1 205 Pfam PF01810 LysE type translocator 16 204 5.0E-29 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D172_018290 4672d0205858e55dc06cfa63194106d1 205 PIRSF PIRSF006324 1 205 6.1E-45 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D172_007460 c2178f1e2e8895eb1f30c732d068f3b8 494 Pfam PF04820 Tryptophan halogenase 8 458 6.5E-181 T 14-10-2018 IPR006905 Flavin-dependent halogenase D172_007460 c2178f1e2e8895eb1f30c732d068f3b8 494 SUPERFAMILY SSF51905 7 417 2.49E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_007460 c2178f1e2e8895eb1f30c732d068f3b8 494 Gene3D G3DSA:3.50.50.60 5 490 7.7E-183 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_007460 c2178f1e2e8895eb1f30c732d068f3b8 494 PIRSF PIRSF011396 1 494 2.6E-194 T 14-10-2018 IPR033856 Flavin-dependent tryptophan halogenase D172_002440 62a134fb5f6a67770478221f2c360053 195 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 195 40.128 T 14-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 D172_002440 62a134fb5f6a67770478221f2c360053 195 SUPERFAMILY SSF46689 5 72 1.75E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_002440 62a134fb5f6a67770478221f2c360053 195 Gene3D G3DSA:1.10.357.10 7 193 7.4E-63 T 14-10-2018 D172_002440 62a134fb5f6a67770478221f2c360053 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 3.0E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_001280 d201751d2db13becf036aff4f1edfe96 411 Pfam PF00266 Aminotransferase class-V 23 402 4.3E-66 T 14-10-2018 IPR000192 Aminotransferase class V domain D172_001280 d201751d2db13becf036aff4f1edfe96 411 Gene3D G3DSA:3.90.1150.10 23 403 4.7E-133 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_001280 d201751d2db13becf036aff4f1edfe96 411 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 404 6.3E-150 T 14-10-2018 IPR011340 Cysteine desulfurase-related D172_001280 d201751d2db13becf036aff4f1edfe96 411 SUPERFAMILY SSF53383 2 410 5.11E-89 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_001280 d201751d2db13becf036aff4f1edfe96 411 Gene3D G3DSA:3.40.640.10 31 289 4.7E-133 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_017210 3a0b0a224b5c45f69e893f6e2f31d540 230 Pfam PF04012 PspA/IM30 family 2 229 1.1E-39 T 14-10-2018 IPR007157 PspA/IM30 D172_005780 a8a57b16f91a9a8b289fd7abbd70bad2 397 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 165 176 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site D172_005780 a8a57b16f91a9a8b289fd7abbd70bad2 397 SUPERFAMILY SSF52743 162 373 1.22E-46 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D172_005780 a8a57b16f91a9a8b289fd7abbd70bad2 397 PRINTS PR00723 Subtilisin serine protease family (S8) signature 202 215 5.2E-10 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related D172_005780 a8a57b16f91a9a8b289fd7abbd70bad2 397 PRINTS PR00723 Subtilisin serine protease family (S8) signature 160 179 5.2E-10 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related D172_005780 a8a57b16f91a9a8b289fd7abbd70bad2 397 PRINTS PR00723 Subtilisin serine protease family (S8) signature 354 370 5.2E-10 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related D172_005780 a8a57b16f91a9a8b289fd7abbd70bad2 397 Pfam PF00082 Subtilase family 162 377 1.6E-26 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 D172_005780 a8a57b16f91a9a8b289fd7abbd70bad2 397 Gene3D G3DSA:3.40.50.200 151 390 4.2E-44 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D172_001295 501bc595859d51354e9ae3bfd01e8ecd 171 Gene3D G3DSA:1.10.10.10 110 168 1.6E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_001295 501bc595859d51354e9ae3bfd01e8ecd 171 SUPERFAMILY SSF88659 97 166 7.1E-9 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_001295 501bc595859d51354e9ae3bfd01e8ecd 171 Pfam PF04545 Sigma-70, region 4 115 162 2.2E-6 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 D172_001295 501bc595859d51354e9ae3bfd01e8ecd 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 165 1.4E-15 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D172_001295 501bc595859d51354e9ae3bfd01e8ecd 171 Gene3D G3DSA:1.10.1740.10 4 97 8.0E-6 T 14-10-2018 D172_001295 501bc595859d51354e9ae3bfd01e8ecd 171 SUPERFAMILY SSF88946 5 90 3.22E-9 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D172_001295 501bc595859d51354e9ae3bfd01e8ecd 171 Pfam PF04542 Sigma-70 region 2 10 76 5.4E-6 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 D172_019625 f7022c5ae67d24a5cfaaea66753070e0 236 Pfam PF00106 short chain dehydrogenase 3 177 4.9E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_019625 f7022c5ae67d24a5cfaaea66753070e0 236 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 126 154 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D172_019625 f7022c5ae67d24a5cfaaea66753070e0 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 8.7E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_019625 f7022c5ae67d24a5cfaaea66753070e0 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 175 8.7E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_019625 f7022c5ae67d24a5cfaaea66753070e0 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 113 129 8.7E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_019625 f7022c5ae67d24a5cfaaea66753070e0 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 158 8.7E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_019625 f7022c5ae67d24a5cfaaea66753070e0 236 SUPERFAMILY SSF51735 3 231 1.61E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_019625 f7022c5ae67d24a5cfaaea66753070e0 236 Gene3D G3DSA:3.40.50.720 2 225 1.1E-43 T 14-10-2018 D172_018385 91dc0718e099052fb55c5ea2c401b133 1009 Gene3D G3DSA:2.170.130.10 34 182 3.3E-13 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_018385 91dc0718e099052fb55c5ea2c401b133 1009 Pfam PF00593 TonB dependent receptor 475 1006 3.2E-33 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_018385 91dc0718e099052fb55c5ea2c401b133 1009 SUPERFAMILY SSF56935 37 1009 3.36E-79 T 14-10-2018 D172_018385 91dc0718e099052fb55c5ea2c401b133 1009 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 176 1.1E-13 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_018385 91dc0718e099052fb55c5ea2c401b133 1009 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 47 1009 4.6E-193 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_018385 91dc0718e099052fb55c5ea2c401b133 1009 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 992 1009 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site D172_013350 196a39ba4145032113e1b41552d16942 286 SUPERFAMILY SSF52540 24 282 1.02E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_013350 196a39ba4145032113e1b41552d16942 286 PIRSF PIRSF003092 6 286 6.1E-84 T 14-10-2018 IPR025501 ATP binding protein MinD D172_013350 196a39ba4145032113e1b41552d16942 286 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 24 262 8.4E-21 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 D172_013350 196a39ba4145032113e1b41552d16942 286 Gene3D G3DSA:3.40.50.300 23 264 4.8E-60 T 14-10-2018 D172_012145 1185a33a403b85c7fd9e8be79891356c 163 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 8 163 19.645 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 D172_012145 1185a33a403b85c7fd9e8be79891356c 163 Pfam PF04390 Lipopolysaccharide-assembly 49 160 2.1E-11 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 D172_012145 1185a33a403b85c7fd9e8be79891356c 163 Gene3D G3DSA:3.30.160.150 23 163 6.9E-46 T 14-10-2018 D172_016835 8a4c5b5d5024cff3cbc75c9f67f53726 218 SMART SM00421 152 209 4.3E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_016835 8a4c5b5d5024cff3cbc75c9f67f53726 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_016835 8a4c5b5d5024cff3cbc75c9f67f53726 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 2.3E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_016835 8a4c5b5d5024cff3cbc75c9f67f53726 218 Gene3D G3DSA:3.40.50.2300 19 138 5.8E-17 T 14-10-2018 D172_016835 8a4c5b5d5024cff3cbc75c9f67f53726 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 2.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_016835 8a4c5b5d5024cff3cbc75c9f67f53726 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 2.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_016835 8a4c5b5d5024cff3cbc75c9f67f53726 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 2.4E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_016835 8a4c5b5d5024cff3cbc75c9f67f53726 218 Gene3D G3DSA:1.10.10.10 142 213 1.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_016835 8a4c5b5d5024cff3cbc75c9f67f53726 218 SUPERFAMILY SSF46894 151 211 4.08E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_010020 cee4b88066fb6cd7f14878662e5fdb1f 114 SUPERFAMILY SSF47226 2 111 3.4E-15 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_010020 cee4b88066fb6cd7f14878662e5fdb1f 114 Gene3D G3DSA:1.20.120.160 2 114 2.6E-11 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_010020 cee4b88066fb6cd7f14878662e5fdb1f 114 Pfam PF01627 Hpt domain 26 97 3.5E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D172_018095 d1d56ff4df4b4023db4be77c682b5dd4 134 Pfam PF13673 Acetyltransferase (GNAT) domain 33 133 1.1E-15 T 14-10-2018 IPR000182 GNAT domain D172_018095 d1d56ff4df4b4023db4be77c682b5dd4 134 SUPERFAMILY SSF55729 7 121 5.32E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_018095 d1d56ff4df4b4023db4be77c682b5dd4 134 Gene3D G3DSA:3.40.630.30 1 134 4.0E-31 T 14-10-2018 D172_002105 b5f94e2b3d0ae5728b2087e838e71c70 164 Pfam PF13772 AIG2-like family 62 139 1.5E-12 T 14-10-2018 D172_002105 b5f94e2b3d0ae5728b2087e838e71c70 164 Gene3D G3DSA:3.10.490.10 1 164 1.2E-36 T 14-10-2018 D172_002105 b5f94e2b3d0ae5728b2087e838e71c70 164 SUPERFAMILY SSF110857 4 129 1.15E-18 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily D172_018725 1da2f786a4cfec582dd921fcdc793164 310 SUPERFAMILY SSF53335 45 298 6.57E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_018725 1da2f786a4cfec582dd921fcdc793164 310 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 7 300 52.46 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 D172_018725 1da2f786a4cfec582dd921fcdc793164 310 Gene3D G3DSA:3.40.50.150 40 298 2.9E-83 T 14-10-2018 D172_018725 1da2f786a4cfec582dd921fcdc793164 310 PIRSF PIRSF029038 1 309 1.3E-138 T 14-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 D172_018725 1da2f786a4cfec582dd921fcdc793164 310 Pfam PF05971 Protein of unknown function (DUF890) 6 298 7.9E-113 T 14-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 D172_011075 d21cda1101e417f2e23d7b49a63d09c5 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 D172_011075 d21cda1101e417f2e23d7b49a63d09c5 326 SUPERFAMILY SSF51395 1 315 2.75E-66 T 14-10-2018 D172_011075 d21cda1101e417f2e23d7b49a63d09c5 326 PIRSF PIRSF006621 1 326 1.6E-75 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 D172_011075 d21cda1101e417f2e23d7b49a63d09c5 326 Gene3D G3DSA:3.20.20.70 1 241 5.0E-71 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_011075 d21cda1101e417f2e23d7b49a63d09c5 326 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 314 49.327 T 14-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 D172_011075 d21cda1101e417f2e23d7b49a63d09c5 326 Gene3D G3DSA:1.20.225.30 247 317 1.6E-14 T 14-10-2018 D172_011075 d21cda1101e417f2e23d7b49a63d09c5 326 Pfam PF01207 Dihydrouridine synthase (Dus) 4 312 1.1E-70 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 D172_012875 a5b56e2044f4325c65e0e696d6768d91 164 Pfam PF02674 Colicin V production protein 4 141 1.6E-36 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 D172_005860 ec5ed00b4322ccba7c812de756e52580 126 Pfam PF13430 Domain of unknown function (DUF4112) 18 120 5.5E-35 T 14-10-2018 IPR025187 Protein of unknown function DUF4112 D172_012175 e3c16fdda29c8b4c4efb024473eef217 368 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 363 1.4E-132 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_012175 e3c16fdda29c8b4c4efb024473eef217 368 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_012175 e3c16fdda29c8b4c4efb024473eef217 368 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 11 366 27.817 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_012175 e3c16fdda29c8b4c4efb024473eef217 368 Pfam PF01098 Cell cycle protein 20 364 2.1E-106 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_021010 9a2591dea6f99ef042f7dea51c8b20a5 392 SMART SM00564 112 144 0.0011 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D172_021010 9a2591dea6f99ef042f7dea51c8b20a5 392 SMART SM00564 152 184 0.35 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D172_021010 9a2591dea6f99ef042f7dea51c8b20a5 392 SMART SM00564 249 280 17.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D172_021010 9a2591dea6f99ef042f7dea51c8b20a5 392 SMART SM00564 287 318 1.1 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D172_021010 9a2591dea6f99ef042f7dea51c8b20a5 392 SMART SM00564 328 359 9.6 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D172_021010 9a2591dea6f99ef042f7dea51c8b20a5 392 SMART SM00564 60 91 2.1E-4 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat D172_021010 9a2591dea6f99ef042f7dea51c8b20a5 392 Gene3D G3DSA:2.130.10.10 16 391 1.1E-96 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 D172_021010 9a2591dea6f99ef042f7dea51c8b20a5 392 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 390 37.367 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB D172_021010 9a2591dea6f99ef042f7dea51c8b20a5 392 SUPERFAMILY SSF50998 30 382 7.53E-80 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily D172_021010 9a2591dea6f99ef042f7dea51c8b20a5 392 Pfam PF13360 PQQ-like domain 41 94 3.3E-4 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat D172_021010 9a2591dea6f99ef042f7dea51c8b20a5 392 Pfam PF13360 PQQ-like domain 107 317 1.7E-43 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat D172_021010 9a2591dea6f99ef042f7dea51c8b20a5 392 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 6 388 7.5E-125 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB D172_010060 e61e4d688cbec1703abae3eeb643b2b7 84 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 7.6E-43 T 14-10-2018 IPR021376 Protein of unknown function DUF2999 D172_013780 8dd6001f629980cced84153883ab1b0a 83 SUPERFAMILY SSF109910 2 79 1.7E-26 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily D172_013780 8dd6001f629980cced84153883ab1b0a 83 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 4.2E-26 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase D172_013780 8dd6001f629980cced84153883ab1b0a 83 Gene3D G3DSA:1.10.150.250 1 83 3.2E-33 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily D172_015735 cfd38d2c31b29b4a357d01a7316f39bd 189 Hamap MF_00528 Septum formation protein Maf [maf]. 4 189 29.306 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 D172_015735 cfd38d2c31b29b4a357d01a7316f39bd 189 Pfam PF02545 Maf-like protein 5 185 6.8E-54 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 D172_015735 cfd38d2c31b29b4a357d01a7316f39bd 189 SUPERFAMILY SSF52972 3 184 1.11E-58 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D172_015735 cfd38d2c31b29b4a357d01a7316f39bd 189 PIRSF PIRSF006305 1 189 3.2E-49 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 D172_015735 cfd38d2c31b29b4a357d01a7316f39bd 189 Gene3D G3DSA:3.90.950.10 3 188 3.0E-67 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D172_015735 cfd38d2c31b29b4a357d01a7316f39bd 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 184 1.0E-54 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 D172_016395 273bd69eac34440dc752d0356d069038 306 SMART SM00563 85 225 9.5E-13 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D172_016395 273bd69eac34440dc752d0356d069038 306 Pfam PF01553 Acyltransferase 79 206 1.3E-12 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D172_016395 273bd69eac34440dc752d0356d069038 306 SUPERFAMILY SSF69593 6 208 9.55E-28 T 14-10-2018 D172_013170 b33d7a81a67de94d959d6b7a89b1237d 146 SUPERFAMILY SSF55961 1 144 1.76E-32 T 14-10-2018 D172_013170 b33d7a81a67de94d959d6b7a89b1237d 146 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 12 135 6.0E-28 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 D172_013170 b33d7a81a67de94d959d6b7a89b1237d 146 Gene3D G3DSA:3.30.530.20 2 144 5.1E-39 T 14-10-2018 IPR023393 START-like domain superfamily D172_008570 ac6aac490296336181e01b02970c3fd1 523 SUPERFAMILY SSF51905 28 346 1.38E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_008570 ac6aac490296336181e01b02970c3fd1 523 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 31 38 - T 14-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 D172_008570 ac6aac490296336181e01b02970c3fd1 523 Gene3D G3DSA:3.50.50.60 27 118 2.7E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_008570 ac6aac490296336181e01b02970c3fd1 523 Pfam PF01266 FAD dependent oxidoreductase 31 412 1.9E-8 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 D172_004700 5ae4e91ef7f28f4a42b065212237ddf7 441 SUPERFAMILY SSF141523 194 354 7.59E-17 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like D172_004700 5ae4e91ef7f28f4a42b065212237ddf7 441 Pfam PF01471 Putative peptidoglycan binding domain 136 168 6.3E-9 T 14-10-2018 IPR002477 Peptidoglycan binding-like D172_004700 5ae4e91ef7f28f4a42b065212237ddf7 441 SUPERFAMILY SSF47090 98 175 1.88E-11 T 14-10-2018 IPR036365 PGBD-like superfamily D172_004700 5ae4e91ef7f28f4a42b065212237ddf7 441 Pfam PF03734 L,D-transpeptidase catalytic domain 196 362 3.6E-27 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 D172_008910 c1326a02a50540b5c459533999562580 249 Pfam PF01564 Spermine/spermidine synthase domain 58 174 1.8E-7 T 14-10-2018 D172_008910 c1326a02a50540b5c459533999562580 249 SUPERFAMILY SSF53335 5 227 5.19E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_008910 c1326a02a50540b5c459533999562580 249 Gene3D G3DSA:3.40.50.150 19 241 1.6E-35 T 14-10-2018 D172_011110 4904f3d94580cc5cb0fe83b78f8ebd14 454 Pfam PF01618 MotA/TolQ/ExbB proton channel family 317 437 2.1E-28 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel D172_011110 4904f3d94580cc5cb0fe83b78f8ebd14 454 PIRSF PIRSF037714 3 454 4.6E-183 T 14-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein D172_003480 7287795a1dc23ee45b1563abb654c40b 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 44.458 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_003480 7287795a1dc23ee45b1563abb654c40b 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 3.1E-180 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 D172_003480 7287795a1dc23ee45b1563abb654c40b 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 9.2E-115 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 D172_003480 7287795a1dc23ee45b1563abb654c40b 419 Gene3D G3DSA:3.65.10.10 21 229 6.3E-166 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 D172_003480 7287795a1dc23ee45b1563abb654c40b 419 SUPERFAMILY SSF55205 1 417 2.29E-143 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 D172_003480 7287795a1dc23ee45b1563abb654c40b 419 Gene3D G3DSA:3.65.10.10 6 414 6.3E-166 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 D172_013530 0f3783762a35b677ae591ddd28696d6c 456 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 377 455 4.7E-14 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain D172_013530 0f3783762a35b677ae591ddd28696d6c 456 SUPERFAMILY SSF117143 79 417 4.58E-69 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like D172_013530 0f3783762a35b677ae591ddd28696d6c 456 Pfam PF07559 Flagellar basal body protein FlaE 183 336 6.2E-22 T 14-10-2018 IPR011491 Flagellar hook protein FlgE D172_013530 0f3783762a35b677ae591ddd28696d6c 456 Gene3D G3DSA:2.60.98.20 157 337 3.9E-22 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily D172_013530 0f3783762a35b677ae591ddd28696d6c 456 Pfam PF00460 Flagella basal body rod protein 3 33 1.1E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 D172_013530 0f3783762a35b677ae591ddd28696d6c 456 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 438 3.9E-95 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G D172_013530 0f3783762a35b677ae591ddd28696d6c 456 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site D172_011400 8a4d44ae7c913810fa8fe936ed9c0079 217 Pfam PF13281 Domain of unknown function (DUF4071) 62 128 1.8E-5 T 14-10-2018 IPR025136 Domain of unknown function DUF4071 D172_006060 7be546ea2520a3c372f9709e06c4d512 179 Gene3D G3DSA:3.40.1580.20 2 179 4.2E-62 T 14-10-2018 IPR038228 Syd superfamily D172_006060 7be546ea2520a3c372f9709e06c4d512 179 Pfam PF07348 Syd protein (SUKH-2) 7 178 4.5E-58 T 14-10-2018 IPR009948 Syd GO:0009898 D172_006060 7be546ea2520a3c372f9709e06c4d512 179 Hamap MF_01104 Protein Syd [syd]. 1 179 30.179 T 14-10-2018 IPR009948 Syd GO:0009898 D172_016555 36ee625b72945cf3a3ec880aea2577c3 120 SUPERFAMILY SSF52172 1 120 1.25E-38 T 14-10-2018 IPR011006 CheY-like superfamily D172_016555 36ee625b72945cf3a3ec880aea2577c3 120 Gene3D G3DSA:3.40.50.12740 2 120 2.7E-39 T 14-10-2018 D172_016555 36ee625b72945cf3a3ec880aea2577c3 120 SMART SM00448 2 115 3.2E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_016555 36ee625b72945cf3a3ec880aea2577c3 120 Pfam PF00072 Response regulator receiver domain 4 115 1.9E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_015395 c9df2cd49fcee828c9eb0be4de2777b7 185 SUPERFAMILY SSF51182 1 177 2.02E-73 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily D172_015395 c9df2cd49fcee828c9eb0be4de2777b7 185 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 174 6.1E-76 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 D172_015395 c9df2cd49fcee828c9eb0be4de2777b7 185 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 172 1.3E-72 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 D172_015395 c9df2cd49fcee828c9eb0be4de2777b7 185 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 176 3.0E-84 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 D172_015395 c9df2cd49fcee828c9eb0be4de2777b7 185 Gene3D G3DSA:2.60.120.10 1 177 6.5E-72 T 14-10-2018 IPR014710 RmlC-like jelly roll fold D172_018330 0ef9a8ba48783d7a5789bb6d78ed9383 325 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 32 309 1.7E-80 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 D172_018330 0ef9a8ba48783d7a5789bb6d78ed9383 325 SUPERFAMILY SSF53850 143 288 1.3E-5 T 14-10-2018 D172_018330 0ef9a8ba48783d7a5789bb6d78ed9383 325 Gene3D G3DSA:3.40.190.170 28 325 1.3E-96 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily D172_018330 0ef9a8ba48783d7a5789bb6d78ed9383 325 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 284 2.1E-70 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 D172_018330 0ef9a8ba48783d7a5789bb6d78ed9383 325 PIRSF PIRSF006470 1 325 3.3E-87 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 D172_001285 640cce6c4444c4ce262ef502ef679594 234 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 129 220 1.1E-11 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 D172_001285 640cce6c4444c4ce262ef502ef679594 234 SMART SM00702 3 221 0.0023 T 14-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 D172_003300 9451102af2ced1357a3386be333e8a5f 382 Gene3D G3DSA:1.10.287.470 90 181 7.1E-63 T 14-10-2018 D172_003300 9451102af2ced1357a3386be333e8a5f 382 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 363 2.5E-45 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D172_003300 9451102af2ced1357a3386be333e8a5f 382 SUPERFAMILY SSF111369 50 237 4.45E-12 T 14-10-2018 D172_003300 9451102af2ced1357a3386be333e8a5f 382 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 68 88 1.8E-6 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D172_003300 9451102af2ced1357a3386be333e8a5f 382 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 348 363 1.8E-6 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 D172_003300 9451102af2ced1357a3386be333e8a5f 382 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 264 2.7E-15 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain D172_003300 9451102af2ced1357a3386be333e8a5f 382 Gene3D G3DSA:2.40.30.170 45 301 7.1E-63 T 14-10-2018 D172_003300 9451102af2ced1357a3386be333e8a5f 382 Gene3D G3DSA:2.40.50.100 56 221 7.1E-63 T 14-10-2018 D172_003300 9451102af2ced1357a3386be333e8a5f 382 Gene3D G3DSA:2.40.420.20 43 359 7.1E-63 T 14-10-2018 D172_014810 c2e2871ea8b7bcb860d793c11a6bedee 572 Gene3D G3DSA:3.30.750.24 428 553 6.7E-17 T 14-10-2018 IPR036513 STAS domain superfamily D172_014810 c2e2871ea8b7bcb860d793c11a6bedee 572 Pfam PF00916 Sulfate permease family 23 386 1.9E-82 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 D172_014810 c2e2871ea8b7bcb860d793c11a6bedee 572 Pfam PF01740 STAS domain 443 536 6.0E-12 T 14-10-2018 IPR002645 STAS domain D172_014810 c2e2871ea8b7bcb860d793c11a6bedee 572 SUPERFAMILY SSF52091 446 537 2.35E-9 T 14-10-2018 IPR036513 STAS domain superfamily D172_002765 181d8403ba0611be8bc0d0050d532636 451 SUPERFAMILY SSF56954 3 438 2.88E-86 T 14-10-2018 D172_002765 181d8403ba0611be8bc0d0050d532636 451 Gene3D G3DSA:1.20.1600.10 24 451 6.8E-116 T 14-10-2018 D172_002765 181d8403ba0611be8bc0d0050d532636 451 Pfam PF02321 Outer membrane efflux protein 28 220 5.1E-26 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D172_002765 181d8403ba0611be8bc0d0050d532636 451 Pfam PF02321 Outer membrane efflux protein 245 434 9.2E-32 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 D172_002765 181d8403ba0611be8bc0d0050d532636 451 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 448 8.7E-104 T 14-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 D172_007410 28075729ac34a8fc05fa25f01da8d751 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 3.5E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_007410 28075729ac34a8fc05fa25f01da8d751 136 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_007410 28075729ac34a8fc05fa25f01da8d751 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 28 1.2E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_017365 0bece705484b3d998c295a82da1e7d72 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 221 304 4.9E-20 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D172_017365 0bece705484b3d998c295a82da1e7d72 347 Pfam PF01548 Transposase 12 155 9.4E-18 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D172_001765 85e30965e01fc11ac635735b4fe449c8 368 PIRSF PIRSF000729 2 366 1.2E-100 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 D172_001765 85e30965e01fc11ac635735b4fe449c8 368 Gene3D G3DSA:3.40.1160.10 2 262 3.6E-78 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D172_001765 85e30965e01fc11ac635735b4fe449c8 368 PRINTS PR00474 Glutamate 5-kinase family signature 44 58 4.3E-39 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D172_001765 85e30965e01fc11ac635735b4fe449c8 368 PRINTS PR00474 Glutamate 5-kinase family signature 114 135 4.3E-39 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D172_001765 85e30965e01fc11ac635735b4fe449c8 368 PRINTS PR00474 Glutamate 5-kinase family signature 146 173 4.3E-39 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D172_001765 85e30965e01fc11ac635735b4fe449c8 368 PRINTS PR00474 Glutamate 5-kinase family signature 207 227 4.3E-39 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 D172_001765 85e30965e01fc11ac635735b4fe449c8 368 ProSitePatterns PS00902 Glutamate 5-kinase signature. 205 222 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D172_001765 85e30965e01fc11ac635735b4fe449c8 368 Hamap MF_00456 Glutamate 5-kinase [proB]. 7 257 32.026 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D172_001765 85e30965e01fc11ac635735b4fe449c8 368 SUPERFAMILY SSF53633 7 255 4.45E-63 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily D172_001765 85e30965e01fc11ac635735b4fe449c8 368 SUPERFAMILY SSF88697 275 344 4.4E-10 T 14-10-2018 IPR015947 PUA-like superfamily D172_001765 85e30965e01fc11ac635735b4fe449c8 368 Pfam PF00696 Amino acid kinase family 8 233 4.4E-38 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 D172_001765 85e30965e01fc11ac635735b4fe449c8 368 TIGRFAM TIGR01027 proB: glutamate 5-kinase 7 350 3.2E-95 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 D172_001765 85e30965e01fc11ac635735b4fe449c8 368 Gene3D G3DSA:2.30.130.10 264 364 1.0E-9 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 D172_002775 ae6fe0f752656bc203f4c2e7c7533e2a 152 Pfam PF06853 Protein of unknown function (DUF1249) 27 140 1.1E-34 T 14-10-2018 IPR009659 Protein of unknown function DUF1249 D172_002780 5d6ed260a11affaf265dca673cc236bc 261 Pfam PF00149 Calcineurin-like phosphoesterase 15 201 4.2E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D172_002780 5d6ed260a11affaf265dca673cc236bc 261 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 259 30.401 T 14-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 D172_002780 5d6ed260a11affaf265dca673cc236bc 261 Gene3D G3DSA:3.60.21.10 5 259 1.1E-48 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like D172_002780 5d6ed260a11affaf265dca673cc236bc 261 SUPERFAMILY SSF56300 15 247 8.04E-40 T 14-10-2018 D172_009490 3dd251f2999c7a9d27e2679596953b65 206 Gene3D G3DSA:3.10.50.40 66 206 2.0E-50 T 14-10-2018 D172_009490 3dd251f2999c7a9d27e2679596953b65 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 114 201 1.0E-27 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D172_009490 3dd251f2999c7a9d27e2679596953b65 206 Gene3D G3DSA:1.10.287.460 3 65 1.2E-18 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 D172_009490 3dd251f2999c7a9d27e2679596953b65 206 SUPERFAMILY SSF54534 5 204 7.7E-55 T 14-10-2018 D172_009490 3dd251f2999c7a9d27e2679596953b65 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 107 3.8E-24 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 D172_002040 2776a8c0c18d7d9fa209f132861db689 221 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 103 187 3.2E-9 T 14-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF D172_014500 043d8bb607a2078a80c19e5f2bc3288f 87 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 1.7E-35 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted D172_014500 043d8bb607a2078a80c19e5f2bc3288f 87 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 1.9E-33 T 14-10-2018 IPR019886 Sodium symporter small subunit, predicted D172_010445 ee01e672b12295d4d9b41d308e9871c9 709 Gene3D G3DSA:1.20.1260.10 18 64 4.1E-6 T 14-10-2018 IPR012347 Ferritin-like D172_010445 ee01e672b12295d4d9b41d308e9871c9 709 Pfam PF12902 Ferritin-like 29 315 1.9E-17 T 14-10-2018 D172_018915 4bb8b6f34f0e7d7c71b63a0a3d9df6ed 209 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 208 3.5E-85 T 14-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 D172_018915 4bb8b6f34f0e7d7c71b63a0a3d9df6ed 209 Pfam PF14497 Glutathione S-transferase, C-terminal domain 121 193 1.1E-6 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal D172_018915 4bb8b6f34f0e7d7c71b63a0a3d9df6ed 209 SUPERFAMILY SSF52833 1 81 2.6E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_018915 4bb8b6f34f0e7d7c71b63a0a3d9df6ed 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 80 4.3E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D172_018915 4bb8b6f34f0e7d7c71b63a0a3d9df6ed 209 Gene3D G3DSA:1.20.1050.10 87 209 1.0E-51 T 14-10-2018 D172_018915 4bb8b6f34f0e7d7c71b63a0a3d9df6ed 209 SUPERFAMILY SSF47616 81 207 1.28E-31 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D172_018915 4bb8b6f34f0e7d7c71b63a0a3d9df6ed 209 Gene3D G3DSA:3.40.30.10 1 86 6.9E-26 T 14-10-2018 D172_021055 1fd7776b51caaccc14749569c95c9f20 290 SUPERFAMILY SSF103481 39 136 1.31E-11 T 14-10-2018 D172_021055 1fd7776b51caaccc14749569c95c9f20 290 SUPERFAMILY SSF103481 207 288 1.96E-7 T 14-10-2018 D172_021055 1fd7776b51caaccc14749569c95c9f20 290 Pfam PF00892 EamA-like transporter family 2 133 3.9E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_021055 1fd7776b51caaccc14749569c95c9f20 290 Pfam PF00892 EamA-like transporter family 145 286 2.0E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_005185 4f4e0cf1c68b2f438965150829e8036a 530 Pfam PF14240 YHYH protein 271 486 4.2E-17 T 14-10-2018 IPR025924 YHYH domain D172_005185 4f4e0cf1c68b2f438965150829e8036a 530 Gene3D G3DSA:2.60.40.3010 46 133 1.2E-13 T 14-10-2018 D172_012715 bcd0525988163fb59ae181c6bbba3277 393 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D172_012715 bcd0525988163fb59ae181c6bbba3277 393 PIRSF PIRSF001434 1 393 1.5E-149 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D172_012715 bcd0525988163fb59ae181c6bbba3277 393 SUPERFAMILY SSF53383 27 391 4.45E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_012715 bcd0525988163fb59ae181c6bbba3277 393 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 4 390 6.5E-172 T 14-10-2018 IPR006237 L-methionine gamma-lyase GO:0018826 KEGG: 00270+4.4.1.11|KEGG: 00450+4.4.1.11|KEGG: 00920+4.4.1.2|MetaCyc: PWY-7793 D172_012715 bcd0525988163fb59ae181c6bbba3277 393 Gene3D G3DSA:3.40.640.10 2 255 4.4E-92 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_012715 bcd0525988163fb59ae181c6bbba3277 393 Gene3D G3DSA:3.90.1150.10 258 392 4.5E-54 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_012715 bcd0525988163fb59ae181c6bbba3277 393 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 389 6.4E-149 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 D172_016920 fc0b552b43b829e506ae6210e2815a01 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 D172_016920 fc0b552b43b829e506ae6210e2815a01 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 1.7E-86 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 D172_016920 fc0b552b43b829e506ae6210e2815a01 251 SUPERFAMILY SSF53335 18 248 1.7E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_016920 fc0b552b43b829e506ae6210e2815a01 251 Gene3D G3DSA:3.40.50.150 31 251 5.1E-77 T 14-10-2018 D172_016920 fc0b552b43b829e506ae6210e2815a01 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 21 250 1.4E-102 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 D172_016920 fc0b552b43b829e506ae6210e2815a01 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.58 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 D172_016385 30bc20a6b388d36196cc9fda70dd5789 384 Pfam PF02417 Chromate transporter 213 374 4.9E-29 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 D172_016385 30bc20a6b388d36196cc9fda70dd5789 384 Pfam PF02417 Chromate transporter 4 167 3.1E-29 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 D172_016385 30bc20a6b388d36196cc9fda70dd5789 384 TIGRFAM TIGR00937 2A51: chromate efflux transporter 9 370 3.1E-77 T 14-10-2018 IPR014047 Chromate transporter, long chain D172_016385 30bc20a6b388d36196cc9fda70dd5789 384 PIRSF PIRSF004810 1 382 6.8E-98 T 14-10-2018 IPR014047 Chromate transporter, long chain D172_002830 5eb19eafa9d3fad8b7739645b0142dcc 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 54.061 T 14-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK D172_002830 5eb19eafa9d3fad8b7739645b0142dcc 301 Gene3D G3DSA:3.30.470.80 182 299 1.3E-42 T 14-10-2018 D172_002830 5eb19eafa9d3fad8b7739645b0142dcc 301 Gene3D G3DSA:3.40.50.20 1 114 2.2E-40 T 14-10-2018 D172_002830 5eb19eafa9d3fad8b7739645b0142dcc 301 Gene3D G3DSA:3.30.1490.20 115 181 1.3E-26 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 D172_002830 5eb19eafa9d3fad8b7739645b0142dcc 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 4.9E-86 T 14-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 D172_002830 5eb19eafa9d3fad8b7739645b0142dcc 301 SUPERFAMILY SSF56059 98 288 6.14E-50 T 14-10-2018 D172_002830 5eb19eafa9d3fad8b7739645b0142dcc 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 3.6E-67 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 D172_009245 20f69aafdf1cfe3396188664b7edfd9f 470 Gene3D G3DSA:3.30.1120.10 381 437 6.4E-118 T 14-10-2018 D172_009245 20f69aafdf1cfe3396188664b7edfd9f 470 SUPERFAMILY SSF53649 25 438 1.13E-114 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D172_009245 20f69aafdf1cfe3396188664b7edfd9f 470 Pfam PF00884 Sulfatase 27 348 1.4E-64 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 D172_009245 20f69aafdf1cfe3396188664b7edfd9f 470 Gene3D G3DSA:3.40.720.10 26 380 6.4E-118 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D172_014800 58747e92cae9c6f485e29e6013ddfbc1 979 Gene3D G3DSA:2.170.130.10 64 174 1.2E-12 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_014800 58747e92cae9c6f485e29e6013ddfbc1 979 SUPERFAMILY SSF56935 42 979 2.62E-79 T 14-10-2018 D172_014800 58747e92cae9c6f485e29e6013ddfbc1 979 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 53 979 1.2E-169 T 14-10-2018 IPR010104 Bacterial TonB-dependent receptor D172_014800 58747e92cae9c6f485e29e6013ddfbc1 979 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 171 1.2E-12 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_014800 58747e92cae9c6f485e29e6013ddfbc1 979 Pfam PF00593 TonB dependent receptor 422 977 3.9E-35 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_018680 98503c9843178efad5ab5602b279eed8 292 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 282 6.6E-66 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 D172_018680 98503c9843178efad5ab5602b279eed8 292 Pfam PF01545 Cation efflux family 20 211 5.9E-46 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 D172_018680 98503c9843178efad5ab5602b279eed8 292 Gene3D G3DSA:1.20.1510.10 15 211 3.5E-48 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily D172_018680 98503c9843178efad5ab5602b279eed8 292 SUPERFAMILY SSF161111 13 212 8.37E-54 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily D172_010280 8e9f2f3b733b52763c42c38e76f5eda7 104 Pfam PF06127 Protein of unknown function (DUF962) 8 102 5.8E-37 T 14-10-2018 IPR009305 Protein of unknown function DUF962 D172_006370 44da617362cb55c0ca6f3f40d4e7235a 181 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 48 70 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 D172_006370 44da617362cb55c0ca6f3f40d4e7235a 181 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 70 6.5E-18 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 D172_006370 44da617362cb55c0ca6f3f40d4e7235a 181 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 179 2.0E-53 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 D172_006370 44da617362cb55c0ca6f3f40d4e7235a 181 Gene3D G3DSA:1.20.120.1760 3 175 1.2E-17 T 14-10-2018 D172_006370 44da617362cb55c0ca6f3f40d4e7235a 181 PIRSF PIRSF000847 1 181 7.5E-46 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 D172_013655 39ecaea33aa6441d6751dea0e0e97faa 292 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 1 269 7.4E-113 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 D172_013655 39ecaea33aa6441d6751dea0e0e97faa 292 Pfam PF00483 Nucleotidyl transferase 2 269 2.7E-26 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 D172_013655 39ecaea33aa6441d6751dea0e0e97faa 292 SUPERFAMILY SSF53448 1 273 1.55E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_013655 39ecaea33aa6441d6751dea0e0e97faa 292 Gene3D G3DSA:3.90.550.10 1 292 1.6E-89 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_000470 4a8465b3c2e5d74fbcf14f57016e54ff 596 Pfam PF00245 Alkaline phosphatase 119 584 1.1E-117 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_000470 4a8465b3c2e5d74fbcf14f57016e54ff 596 SMART SM00098 120 587 2.8E-141 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_000470 4a8465b3c2e5d74fbcf14f57016e54ff 596 Gene3D G3DSA:3.40.720.10 86 596 4.6E-181 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D172_000470 4a8465b3c2e5d74fbcf14f57016e54ff 596 SUPERFAMILY SSF53649 110 586 1.96E-148 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D172_000470 4a8465b3c2e5d74fbcf14f57016e54ff 596 PRINTS PR00113 Alkaline phosphatase signature 222 242 5.3E-43 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_000470 4a8465b3c2e5d74fbcf14f57016e54ff 596 PRINTS PR00113 Alkaline phosphatase signature 175 190 5.3E-43 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_000470 4a8465b3c2e5d74fbcf14f57016e54ff 596 PRINTS PR00113 Alkaline phosphatase signature 119 139 5.3E-43 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_000470 4a8465b3c2e5d74fbcf14f57016e54ff 596 PRINTS PR00113 Alkaline phosphatase signature 384 413 5.3E-43 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 D172_014610 ab7fe4e96bf9e1e07d6b913d2a636793 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 126 5.1E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D172_014610 ab7fe4e96bf9e1e07d6b913d2a636793 139 Gene3D G3DSA:3.10.180.10 1 134 4.7E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_014610 ab7fe4e96bf9e1e07d6b913d2a636793 139 SUPERFAMILY SSF54593 5 130 2.96E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_011335 d5b82b2a3f415e580033915e397958be 184 Gene3D G3DSA:3.40.50.360 1 184 1.1E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_011335 d5b82b2a3f415e580033915e397958be 184 Pfam PF03358 NADPH-dependent FMN reductase 52 112 4.5E-6 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 D172_011335 d5b82b2a3f415e580033915e397958be 184 SUPERFAMILY SSF52218 4 183 3.15E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_011335 d5b82b2a3f415e580033915e397958be 184 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 5 183 3.0E-42 T 14-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 D172_000695 2b99c1cd4bb177f92ee6835747230782 127 Gene3D G3DSA:1.20.120.550 1 127 2.0E-16 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily D172_000695 2b99c1cd4bb177f92ee6835747230782 127 Pfam PF01124 MAPEG family 4 126 7.5E-20 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein D172_000695 2b99c1cd4bb177f92ee6835747230782 127 SUPERFAMILY SSF161084 2 124 8.83E-24 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily D172_008260 3a61f813a59dd0f916f2517c428f6558 79 Gene3D G3DSA:3.40.30.10 3 79 1.6E-21 T 14-10-2018 D172_008260 3a61f813a59dd0f916f2517c428f6558 79 SUPERFAMILY SSF52833 5 77 1.62E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_008260 3a61f813a59dd0f916f2517c428f6558 79 Pfam PF05768 Glutaredoxin-like domain (DUF836) 5 75 3.3E-15 T 14-10-2018 IPR008554 Glutaredoxin-like D172_020230 bd7b7c25ea0a2f8eb43b14a2347237c3 346 Gene3D G3DSA:3.30.420.10 161 325 1.4E-16 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_020230 bd7b7c25ea0a2f8eb43b14a2347237c3 346 SUPERFAMILY SSF46689 18 114 6.99E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_020230 bd7b7c25ea0a2f8eb43b14a2347237c3 346 Pfam PF00665 Integrase core domain 161 283 5.8E-21 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_020230 bd7b7c25ea0a2f8eb43b14a2347237c3 346 SUPERFAMILY SSF53098 160 334 4.93E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_020230 bd7b7c25ea0a2f8eb43b14a2347237c3 346 Pfam PF13551 Winged helix-turn helix 11 74 6.3E-20 T 14-10-2018 D172_012650 7f6f06f284373b43803f05e77301a16e 288 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 243 269 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 D172_012650 7f6f06f284373b43803f05e77301a16e 288 Pfam PF01148 Cytidylyltransferase family 3 282 1.1E-62 T 14-10-2018 D172_009840 e67f6b247be15cae01601d1d58fce918 616 SUPERFAMILY SSF51011 535 610 7.2E-11 T 14-10-2018 D172_009840 e67f6b247be15cae01601d1d58fce918 616 Gene3D G3DSA:2.60.40.10 21 104 1.1E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_009840 e67f6b247be15cae01601d1d58fce918 616 Pfam PF00128 Alpha amylase, catalytic domain 158 477 8.1E-54 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D172_009840 e67f6b247be15cae01601d1d58fce918 616 Gene3D G3DSA:2.60.40.1180 535 613 4.0E-17 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta D172_009840 e67f6b247be15cae01601d1d58fce918 616 Gene3D G3DSA:3.20.20.80 112 534 1.0E-135 T 14-10-2018 D172_009840 e67f6b247be15cae01601d1d58fce918 616 Pfam PF09087 Cyclomaltodextrinase, N-terminal 24 106 4.3E-23 T 14-10-2018 IPR015171 Cyclomaltodextrinase, N-terminal D172_009840 e67f6b247be15cae01601d1d58fce918 616 Pfam PF10438 Cyclo-malto-dextrinase C-terminal domain 536 610 1.3E-18 T 14-10-2018 IPR019492 Cyclo-malto-dextrinase, C-terminal D172_009840 e67f6b247be15cae01601d1d58fce918 616 SMART SM00642 124 525 1.8E-66 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 D172_009840 e67f6b247be15cae01601d1d58fce918 616 SUPERFAMILY SSF81296 20 106 3.36E-21 T 14-10-2018 IPR014756 Immunoglobulin E-set D172_009840 e67f6b247be15cae01601d1d58fce918 616 SUPERFAMILY SSF51445 119 532 1.28E-97 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_019780 d3f34ec6853567b5d7cdfbf3631f9b5e 369 Gene3D G3DSA:3.40.640.10 56 260 2.2E-99 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_019780 d3f34ec6853567b5d7cdfbf3631f9b5e 369 Pfam PF00155 Aminotransferase class I and II 47 346 3.0E-43 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D172_019780 d3f34ec6853567b5d7cdfbf3631f9b5e 369 SUPERFAMILY SSF53383 30 347 7.23E-56 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_019780 d3f34ec6853567b5d7cdfbf3631f9b5e 369 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 213 222 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 D172_019780 d3f34ec6853567b5d7cdfbf3631f9b5e 369 Gene3D G3DSA:3.90.1150.10 12 346 2.2E-99 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_019780 d3f34ec6853567b5d7cdfbf3631f9b5e 369 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 14 347 1.7E-86 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 D172_002695 2317b28ed23d591b2d4ef1e6abf40fce 177 Pfam PF02325 YGGT family 106 172 2.6E-21 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 D172_002695 2317b28ed23d591b2d4ef1e6abf40fce 177 Pfam PF02325 YGGT family 10 76 7.2E-19 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 D172_016200 da1cac728f00317169d15efe57cdb705 128 ProSitePatterns PS00054 Ribosomal protein S11 signature. 96 118 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site D172_016200 da1cac728f00317169d15efe57cdb705 128 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 128 32.684 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 D172_016200 da1cac728f00317169d15efe57cdb705 128 PIRSF PIRSF002131 1 128 7.0E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 D172_016200 da1cac728f00317169d15efe57cdb705 128 Gene3D G3DSA:3.30.420.80 2 128 4.7E-56 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 D172_016200 da1cac728f00317169d15efe57cdb705 128 SUPERFAMILY SSF53137 14 128 4.19E-47 T 14-10-2018 D172_016200 da1cac728f00317169d15efe57cdb705 128 Pfam PF00411 Ribosomal protein S11 18 127 1.1E-50 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 D172_016200 da1cac728f00317169d15efe57cdb705 128 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 9 125 2.5E-55 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_013550 508bb89468c7e0093e220c03952548da 277 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 270 1.5E-62 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal D172_013550 508bb89468c7e0093e220c03952548da 277 Gene3D G3DSA:1.10.155.10 1 74 4.0E-9 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily D172_013550 508bb89468c7e0093e220c03952548da 277 SUPERFAMILY SSF53335 76 269 5.77E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_013550 508bb89468c7e0093e220c03952548da 277 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 55 4.5E-12 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal D172_013550 508bb89468c7e0093e220c03952548da 277 SUPERFAMILY SSF47757 5 75 1.44E-15 T 14-10-2018 D172_013550 508bb89468c7e0093e220c03952548da 277 PRINTS PR00996 Glutamate methyltransferase family signature 232 255 1.4E-40 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D172_013550 508bb89468c7e0093e220c03952548da 277 PRINTS PR00996 Glutamate methyltransferase family signature 213 227 1.4E-40 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D172_013550 508bb89468c7e0093e220c03952548da 277 PRINTS PR00996 Glutamate methyltransferase family signature 144 160 1.4E-40 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D172_013550 508bb89468c7e0093e220c03952548da 277 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 1.4E-40 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D172_013550 508bb89468c7e0093e220c03952548da 277 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 1.4E-40 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D172_013550 508bb89468c7e0093e220c03952548da 277 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 1.4E-40 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D172_013550 508bb89468c7e0093e220c03952548da 277 SMART SM00138 8 273 1.3E-100 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 D172_013550 508bb89468c7e0093e220c03952548da 277 Gene3D G3DSA:3.40.50.150 75 276 5.4E-59 T 14-10-2018 D172_019660 a37844bc55ee2684a55efbdad1258b97 91 Gene3D G3DSA:4.10.520.10 1 90 6.8E-36 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D172_019660 a37844bc55ee2684a55efbdad1258b97 91 SUPERFAMILY SSF47729 1 90 1.31E-31 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 D172_019660 a37844bc55ee2684a55efbdad1258b97 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.3E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_019660 a37844bc55ee2684a55efbdad1258b97 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.3E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_019660 a37844bc55ee2684a55efbdad1258b97 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.3E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_019660 a37844bc55ee2684a55efbdad1258b97 91 SMART SM00411 1 90 2.3E-41 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_019660 a37844bc55ee2684a55efbdad1258b97 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.3E-33 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 D172_019660 a37844bc55ee2684a55efbdad1258b97 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 D172_013920 42fbaf6bcf22b78454fb2e3799c71595 163 SUPERFAMILY SSF52374 4 156 4.86E-45 T 14-10-2018 D172_013920 42fbaf6bcf22b78454fb2e3799c71595 163 Pfam PF01467 Cytidylyltransferase-like 6 134 2.1E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D172_013920 42fbaf6bcf22b78454fb2e3799c71595 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 60 1.0E-17 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 D172_013920 42fbaf6bcf22b78454fb2e3799c71595 163 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 1.1E-59 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D172_013920 42fbaf6bcf22b78454fb2e3799c71595 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 4.9E-49 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D172_013920 42fbaf6bcf22b78454fb2e3799c71595 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 4.9E-49 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D172_013920 42fbaf6bcf22b78454fb2e3799c71595 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 4.9E-49 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D172_013920 42fbaf6bcf22b78454fb2e3799c71595 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 4.9E-49 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D172_013920 42fbaf6bcf22b78454fb2e3799c71595 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 4.9E-49 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D172_013920 42fbaf6bcf22b78454fb2e3799c71595 163 Gene3D G3DSA:3.40.50.620 1 160 1.7E-56 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_013920 42fbaf6bcf22b78454fb2e3799c71595 163 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.933 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 D172_009550 c3606b83af8c086c0a6792b600d67666 357 Gene3D G3DSA:3.30.565.10 214 351 1.0E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_009550 c3606b83af8c086c0a6792b600d67666 357 Pfam PF06580 Histidine kinase 158 238 1.5E-24 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 D172_009550 c3606b83af8c086c0a6792b600d67666 357 SUPERFAMILY SSF55874 214 348 4.79E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_017575 185ad6b388929b0c1a80f2958b287123 258 Pfam PF07024 ImpE protein 140 250 3.4E-25 T 14-10-2018 IPR009211 Predicted virulence protein, SciE type D172_017575 185ad6b388929b0c1a80f2958b287123 258 Gene3D G3DSA:1.25.40.10 1 86 1.4E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_017575 185ad6b388929b0c1a80f2958b287123 258 SUPERFAMILY SSF144059 4 250 1.11E-60 T 14-10-2018 D172_019440 fdf46766b22098040e4cbb7bc9ceb28f 85 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 2.1E-30 T 14-10-2018 IPR021432 Protein of unknown function DUF3081 D172_009665 53442a517a9134ebde1ab8d1f88be7ec 635 Gene3D G3DSA:3.40.47.10 2 123 1.4E-5 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_009665 53442a517a9134ebde1ab8d1f88be7ec 635 Gene3D G3DSA:3.40.47.10 142 594 6.5E-78 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_009665 53442a517a9134ebde1ab8d1f88be7ec 635 SUPERFAMILY SSF53901 347 545 2.09E-27 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_009665 53442a517a9134ebde1ab8d1f88be7ec 635 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 387 500 2.0E-5 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal D172_009665 53442a517a9134ebde1ab8d1f88be7ec 635 SUPERFAMILY SSF53901 167 383 2.31E-28 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_009665 53442a517a9134ebde1ab8d1f88be7ec 635 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 160 372 2.0E-11 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D172_014705 9855a585d749bb0306f7e4b750289052 501 Pfam PF08386 TAP-like protein 378 476 1.3E-15 T 14-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal D172_014705 9855a585d749bb0306f7e4b750289052 501 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 88 96 1.9E-5 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 D172_014705 9855a585d749bb0306f7e4b750289052 501 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 119 130 1.9E-5 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 D172_014705 9855a585d749bb0306f7e4b750289052 501 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 198 212 1.9E-5 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 D172_014705 9855a585d749bb0306f7e4b750289052 501 SUPERFAMILY SSF53474 39 441 4.59E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_013155 90eed53f784e30d8d7b51c591909e10a 85 SUPERFAMILY SSF82771 6 77 7.59E-10 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 D172_013155 90eed53f784e30d8d7b51c591909e10a 85 Gene3D G3DSA:3.40.1440.10 1 85 7.5E-22 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 D172_013155 90eed53f784e30d8d7b51c591909e10a 85 Pfam PF01541 GIY-YIG catalytic domain 5 65 3.8E-10 T 14-10-2018 IPR000305 GIY-YIG endonuclease D172_015135 a31c2b6aa93e618fbad4142ab78d39f1 809 Pfam PF16313 Met-zincin 406 710 6.2E-68 T 14-10-2018 IPR032534 Domain of unknown function DUF4953 D172_015135 a31c2b6aa93e618fbad4142ab78d39f1 809 Gene3D G3DSA:3.40.390.10 345 481 8.9E-7 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 D172_015135 a31c2b6aa93e618fbad4142ab78d39f1 809 SUPERFAMILY SSF55486 282 484 1.04E-25 T 14-10-2018 D172_015135 a31c2b6aa93e618fbad4142ab78d39f1 809 Pfam PF17148 Domain of unknown function (DUF5117) 85 277 7.2E-38 T 14-10-2018 IPR033413 Domain of unknown function DUF5117 D172_003360 771ece96ff39be27805c107fe821670b 256 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 3 256 1.9E-84 T 14-10-2018 IPR026387 Outer membrane protein D172_004320 a29adf88507ec90f3cb31a12f472c477 131 Gene3D G3DSA:3.30.110.70 36 131 5.2E-8 T 14-10-2018 D172_012170 e4975859093d30309a0e30073b23f751 625 Gene3D G3DSA:3.90.1310.10 65 249 2.1E-48 T 14-10-2018 D172_012170 e4975859093d30309a0e30073b23f751 625 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 610 6.6E-70 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 D172_012170 e4975859093d30309a0e30073b23f751 625 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 617 50.493 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D172_012170 e4975859093d30309a0e30073b23f751 625 Gene3D G3DSA:3.30.1390.30 86 161 2.1E-48 T 14-10-2018 D172_012170 e4975859093d30309a0e30073b23f751 625 SUPERFAMILY SSF56519 57 254 2.75E-52 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 D172_012170 e4975859093d30309a0e30073b23f751 625 SUPERFAMILY SSF56601 255 615 1.18E-91 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D172_012170 e4975859093d30309a0e30073b23f751 625 Gene3D G3DSA:3.40.710.10 250 620 5.3E-93 T 14-10-2018 D172_012170 e4975859093d30309a0e30073b23f751 625 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 614 2.5E-236 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D172_012170 e4975859093d30309a0e30073b23f751 625 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 1.5E-43 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 D172_012215 1cf0cfd7dcf38b0129c11fb458d3b416 539 SUPERFAMILY SSF52025 133 247 2.2E-5 T 14-10-2018 D172_012215 1cf0cfd7dcf38b0129c11fb458d3b416 539 Gene3D G3DSA:3.50.30.30 100 290 5.5E-53 T 14-10-2018 D172_012215 1cf0cfd7dcf38b0129c11fb458d3b416 539 Gene3D G3DSA:3.40.630.10 60 491 5.5E-53 T 14-10-2018 D172_012215 1cf0cfd7dcf38b0129c11fb458d3b416 539 SUPERFAMILY SSF53187 36 518 8.75E-62 T 14-10-2018 D172_012215 1cf0cfd7dcf38b0129c11fb458d3b416 539 Pfam PF02225 PA domain 135 220 1.5E-6 T 14-10-2018 IPR003137 PA domain D172_012215 1cf0cfd7dcf38b0129c11fb458d3b416 539 Pfam PF04389 Peptidase family M28 300 494 1.8E-44 T 14-10-2018 IPR007484 Peptidase M28 D172_007055 ddbaa60ccd660c9e2b31994761b53517 267 Gene3D G3DSA:3.20.10.10 122 261 3.1E-43 T 14-10-2018 D172_007055 ddbaa60ccd660c9e2b31994761b53517 267 Pfam PF01063 Amino-transferase class IV 25 243 2.4E-46 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 D172_007055 ddbaa60ccd660c9e2b31994761b53517 267 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 7 258 3.1E-90 T 14-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 D172_007055 ddbaa60ccd660c9e2b31994761b53517 267 Gene3D G3DSA:3.30.470.10 5 112 1.7E-23 T 14-10-2018 D172_007055 ddbaa60ccd660c9e2b31994761b53517 267 SUPERFAMILY SSF56752 10 262 1.01E-61 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 D172_000650 3af10c08f2512b6223dcf512ea68d5c4 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 19 272 3.0E-63 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 D172_000650 3af10c08f2512b6223dcf512ea68d5c4 276 Gene3D G3DSA:3.40.50.620 1 276 7.0E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_000650 3af10c08f2512b6223dcf512ea68d5c4 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 45.942 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 D172_000650 3af10c08f2512b6223dcf512ea68d5c4 276 SUPERFAMILY SSF52402 2 276 9.16E-79 T 14-10-2018 D172_000650 3af10c08f2512b6223dcf512ea68d5c4 276 Pfam PF02540 NAD synthase 22 270 9.7E-63 T 14-10-2018 IPR022310 NAD/GMP synthase D172_004615 f77f1bebd15ca03229f6ef3434b2504a 165 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 33.031 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D172_004615 f77f1bebd15ca03229f6ef3434b2504a 165 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D172_004615 f77f1bebd15ca03229f6ef3434b2504a 165 Gene3D G3DSA:3.30.1330.50 1 165 1.7E-64 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D172_004615 f77f1bebd15ca03229f6ef3434b2504a 165 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 156 1.8E-62 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D172_004615 f77f1bebd15ca03229f6ef3434b2504a 165 Pfam PF02542 YgbB family 2 155 5.8E-60 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D172_004615 f77f1bebd15ca03229f6ef3434b2504a 165 SUPERFAMILY SSF69765 1 157 1.7E-61 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 D172_016235 2fd62a63b46f5b8d80a78ad1de4c8ae7 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 116 4.5E-39 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_016235 2fd62a63b46f5b8d80a78ad1de4c8ae7 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 116 24.824 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_016235 2fd62a63b46f5b8d80a78ad1de4c8ae7 116 SUPERFAMILY SSF53137 3 114 1.26E-47 T 14-10-2018 D172_016235 2fd62a63b46f5b8d80a78ad1de4c8ae7 116 Gene3D G3DSA:3.30.420.100 1 116 1.4E-41 T 14-10-2018 D172_016235 2fd62a63b46f5b8d80a78ad1de4c8ae7 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 116 1.0E-38 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_004485 7d704172aa4d33d7c7889f8ccadf96ef 342 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 122 332 1.3E-69 T 14-10-2018 D172_004485 7d704172aa4d33d7c7889f8ccadf96ef 342 Gene3D G3DSA:3.40.50.1000 61 333 9.9E-69 T 14-10-2018 IPR023214 HAD superfamily D172_004485 7d704172aa4d33d7c7889f8ccadf96ef 342 Pfam PF12710 haloacid dehalogenase-like hydrolase 163 297 5.7E-14 T 14-10-2018 D172_004485 7d704172aa4d33d7c7889f8ccadf96ef 342 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 129 299 6.3E-24 T 14-10-2018 D172_004485 7d704172aa4d33d7c7889f8ccadf96ef 342 SUPERFAMILY SSF56784 126 330 6.37E-44 T 14-10-2018 IPR036412 HAD-like superfamily D172_012280 419f1e2727a1b40b391f8742d47ed348 2666 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2375 2449 6.5E-18 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 D172_012280 419f1e2727a1b40b391f8742d47ed348 2666 Gene3D G3DSA:2.180.10.10 2181 2449 4.2E-36 T 14-10-2018 D172_012465 fb481787a37a3ad94afcb485141f1070 175 Gene3D G3DSA:3.40.30.10 7 168 5.2E-22 T 14-10-2018 D172_012465 fb481787a37a3ad94afcb485141f1070 175 SUPERFAMILY SSF52833 26 167 2.37E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_012465 fb481787a37a3ad94afcb485141f1070 175 Pfam PF00578 AhpC/TSA family 18 139 3.3E-17 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D172_020985 2bcab8a8e1808ce2ae7133afd8a397ec 435 Pfam PF00875 DNA photolyase 6 164 1.2E-25 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 D172_020985 2bcab8a8e1808ce2ae7133afd8a397ec 435 PRINTS PR00147 DNA photolyase signature 319 335 5.7E-12 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 D172_020985 2bcab8a8e1808ce2ae7133afd8a397ec 435 PRINTS PR00147 DNA photolyase signature 378 392 5.7E-12 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 D172_020985 2bcab8a8e1808ce2ae7133afd8a397ec 435 PRINTS PR00147 DNA photolyase signature 339 357 5.7E-12 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 D172_020985 2bcab8a8e1808ce2ae7133afd8a397ec 435 Gene3D G3DSA:1.10.579.10 296 430 1.4E-48 T 14-10-2018 D172_020985 2bcab8a8e1808ce2ae7133afd8a397ec 435 SUPERFAMILY SSF48173 198 415 1.44E-63 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 D172_020985 2bcab8a8e1808ce2ae7133afd8a397ec 435 SUPERFAMILY SSF52425 3 181 3.01E-38 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 D172_020985 2bcab8a8e1808ce2ae7133afd8a397ec 435 Gene3D G3DSA:3.40.50.620 5 129 6.4E-23 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_020985 2bcab8a8e1808ce2ae7133afd8a397ec 435 Gene3D G3DSA:1.25.40.80 133 292 8.2E-41 T 14-10-2018 D172_020985 2bcab8a8e1808ce2ae7133afd8a397ec 435 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 4 417 3.1E-141 T 14-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 D172_020985 2bcab8a8e1808ce2ae7133afd8a397ec 435 Pfam PF03441 FAD binding domain of DNA photolyase 272 415 1.8E-38 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 D172_010825 6e8e6dce8b98a76329a5dafd12a4239f 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 77 1.7E-12 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain D172_010825 6e8e6dce8b98a76329a5dafd12a4239f 96 SUPERFAMILY SSF54909 2 92 2.39E-24 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel D172_010825 6e8e6dce8b98a76329a5dafd12a4239f 96 Gene3D G3DSA:3.30.70.100 1 96 9.2E-25 T 14-10-2018 D172_016315 e6537509e569b8e945dbb9826fe7172a 225 SUPERFAMILY SSF55469 17 225 2.88E-43 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 D172_016315 e6537509e569b8e945dbb9826fe7172a 225 Gene3D G3DSA:3.40.109.10 8 224 4.2E-51 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 D172_016315 e6537509e569b8e945dbb9826fe7172a 225 Pfam PF00881 Nitroreductase family 33 201 3.8E-22 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 D172_004150 e03b0fc6fbf92ad7468c117948ab163a 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 178 3.0E-26 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 D172_004150 e03b0fc6fbf92ad7468c117948ab163a 204 SUPERFAMILY SSF56529 10 189 5.23E-46 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 D172_004150 e03b0fc6fbf92ad7468c117948ab163a 204 Gene3D G3DSA:3.90.850.10 8 204 5.9E-50 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 D172_002955 6fcdfaba1aca1d8228babd9c8d263d0a 232 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 2 232 52.256 T 14-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 D172_002955 6fcdfaba1aca1d8228babd9c8d263d0a 232 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 106 112 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D172_002955 6fcdfaba1aca1d8228babd9c8d263d0a 232 Pfam PF05175 Methyltransferase small domain 36 120 3.6E-13 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 D172_002955 6fcdfaba1aca1d8228babd9c8d263d0a 232 SUPERFAMILY SSF53335 6 162 1.64E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_002955 6fcdfaba1aca1d8228babd9c8d263d0a 232 Gene3D G3DSA:3.40.50.150 1 228 5.4E-50 T 14-10-2018 D172_012910 8103a4a695f8e79615efc748f74d8935 373 SUPERFAMILY SSF52283 4 102 1.42E-20 T 14-10-2018 D172_012910 8103a4a695f8e79615efc748f74d8935 373 Gene3D G3DSA:3.40.50.720 1 277 3.7E-109 T 14-10-2018 D172_012910 8103a4a695f8e79615efc748f74d8935 373 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 248 4.5E-33 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 D172_012910 8103a4a695f8e79615efc748f74d8935 373 Pfam PF11890 Domain of unknown function (DUF3410) 290 368 2.3E-21 T 14-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 D172_012910 8103a4a695f8e79615efc748f74d8935 373 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 273 5.1E-19 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 D172_012910 8103a4a695f8e79615efc748f74d8935 373 SUPERFAMILY SSF51735 92 246 9.69E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_012910 8103a4a695f8e79615efc748f74d8935 373 Gene3D G3DSA:3.30.1370.170 294 373 1.1E-21 T 14-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 D172_012910 8103a4a695f8e79615efc748f74d8935 373 Gene3D G3DSA:3.40.50.720 93 258 3.7E-109 T 14-10-2018 D172_012910 8103a4a695f8e79615efc748f74d8935 373 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 45.319 T 14-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 D172_012910 8103a4a695f8e79615efc748f74d8935 373 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 120 147 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 D172_008285 d6c58048fcd3253e1bf411982f17a5a3 581 Pfam PF00005 ABC transporter 355 506 6.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_008285 d6c58048fcd3253e1bf411982f17a5a3 581 Gene3D G3DSA:1.20.1560.10 1 324 1.4E-82 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D172_008285 d6c58048fcd3253e1bf411982f17a5a3 581 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 8 578 1.9E-224 T 14-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 D172_008285 d6c58048fcd3253e1bf411982f17a5a3 581 SUPERFAMILY SSF52540 328 577 1.46E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_008285 d6c58048fcd3253e1bf411982f17a5a3 581 Gene3D G3DSA:3.40.50.300 325 578 6.1E-88 T 14-10-2018 D172_008285 d6c58048fcd3253e1bf411982f17a5a3 581 SMART SM00382 364 552 4.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_008285 d6c58048fcd3253e1bf411982f17a5a3 581 SUPERFAMILY SSF90123 10 320 3.4E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 D172_008285 d6c58048fcd3253e1bf411982f17a5a3 581 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_008285 d6c58048fcd3253e1bf411982f17a5a3 581 Pfam PF00664 ABC transporter transmembrane region 26 294 4.8E-59 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 D172_013250 091a0db555996c0b5500d026bf5a8240 189 Pfam PF08534 Redoxin 38 173 1.6E-16 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 D172_013250 091a0db555996c0b5500d026bf5a8240 189 SUPERFAMILY SSF52833 37 188 1.49E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_013250 091a0db555996c0b5500d026bf5a8240 189 Gene3D G3DSA:3.40.30.10 23 189 1.8E-35 T 14-10-2018 D172_013250 091a0db555996c0b5500d026bf5a8240 189 ProSitePatterns PS00194 Thioredoxin family active site. 67 85 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 D172_013205 f8adb2f31e2f621954f9d3c64f706e0a 172 Pfam PF02600 Disulfide bond formation protein DsbB 10 160 2.1E-43 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 D172_013205 f8adb2f31e2f621954f9d3c64f706e0a 172 Gene3D G3DSA:1.20.1550.10 1 171 7.4E-53 T 14-10-2018 IPR023380 DsbB-like superfamily D172_013205 f8adb2f31e2f621954f9d3c64f706e0a 172 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 6 168 21.774 T 14-10-2018 IPR022920 Disulphide bond formation protein DsbB D172_013205 f8adb2f31e2f621954f9d3c64f706e0a 172 SUPERFAMILY SSF158442 14 161 7.32E-42 T 14-10-2018 IPR023380 DsbB-like superfamily D172_016125 79128f6197cc21afa140d9a7f1388a62 123 Gene3D G3DSA:1.10.3830.10 6 123 4.2E-31 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 D172_016125 79128f6197cc21afa140d9a7f1388a62 123 Pfam PF01219 Prokaryotic diacylglycerol kinase 21 121 1.0E-26 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 D172_016125 79128f6197cc21afa140d9a7f1388a62 123 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 74 85 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 D172_013375 015cce35502e2a57a3afa14a59062713 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.9E-14 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 D172_013375 015cce35502e2a57a3afa14a59062713 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.9E-14 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 D172_013375 015cce35502e2a57a3afa14a59062713 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.9E-14 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 D172_013375 015cce35502e2a57a3afa14a59062713 89 PIRSF PIRSF004669 1 89 1.2E-26 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 D172_013375 015cce35502e2a57a3afa14a59062713 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 6.5E-25 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 D172_009320 51c7ede02594a436027582f9c1501cf3 360 Gene3D G3DSA:2.115.10.20 1 360 1.1E-135 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily D172_009320 51c7ede02594a436027582f9c1501cf3 360 Pfam PF04616 Glycosyl hydrolases family 43 92 167 4.9E-8 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 D172_009320 51c7ede02594a436027582f9c1501cf3 360 SUPERFAMILY SSF75005 44 270 1.67E-34 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily D172_001810 a23faf329d65729a3b90632c83e2060d 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 3 179 7.8E-52 T 14-10-2018 IPR018636 Protein of unknown function DUF2058 D172_004590 6c307f4edc883ff3268ee2e20e0749ca 79 Gene3D G3DSA:2.30.30.320 4 79 2.0E-31 T 14-10-2018 IPR037135 DUF1653-like domain superfamily D172_004590 6c307f4edc883ff3268ee2e20e0749ca 79 Pfam PF07866 Protein of unknown function (DUF1653) 13 73 1.6E-29 T 14-10-2018 IPR023387 DUF1653-like domain D172_012440 d4e06dfec06cdd6437f969244487ef9a 517 Gene3D G3DSA:3.40.50.620 9 232 6.5E-97 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_012440 d4e06dfec06cdd6437f969244487ef9a 517 Gene3D G3DSA:1.10.10.1710 451 516 4.5E-26 T 14-10-2018 D172_012440 d4e06dfec06cdd6437f969244487ef9a 517 Gene3D G3DSA:1.25.40.80 134 326 6.5E-97 T 14-10-2018 D172_012440 d4e06dfec06cdd6437f969244487ef9a 517 Gene3D G3DSA:1.10.579.10 330 450 7.2E-55 T 14-10-2018 D172_012440 d4e06dfec06cdd6437f969244487ef9a 517 SUPERFAMILY SSF48173 231 503 1.31E-59 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 D172_012440 d4e06dfec06cdd6437f969244487ef9a 517 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 8 226 3.6E-67 T 14-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein D172_001325 27115eac7739a53166d39030ce00d526 508 Gene3D G3DSA:3.50.50.60 5 501 3.3E-184 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_001325 27115eac7739a53166d39030ce00d526 508 Pfam PF04820 Tryptophan halogenase 8 463 2.0E-125 T 14-10-2018 IPR006905 Flavin-dependent halogenase D172_001325 27115eac7739a53166d39030ce00d526 508 PIRSF PIRSF011396 1 507 1.4E-166 T 14-10-2018 IPR033856 Flavin-dependent tryptophan halogenase D172_001325 27115eac7739a53166d39030ce00d526 508 SUPERFAMILY SSF51905 4 421 2.59E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_019370 6d11f09e1772cb88efd04eeae72d1393 152 Gene3D G3DSA:3.10.129.10 5 141 6.6E-20 T 14-10-2018 D172_019370 6d11f09e1772cb88efd04eeae72d1393 152 PIRSF PIRSF020565 1 152 1.3E-51 T 14-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted D172_019370 6d11f09e1772cb88efd04eeae72d1393 152 SUPERFAMILY SSF54637 6 143 1.17E-24 T 14-10-2018 IPR029069 HotDog domain superfamily D172_009825 0aec1ffd450516df61d775cbbc4d1b9b 802 Gene3D G3DSA:2.70.98.10 33 324 2.4E-80 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 D172_009825 0aec1ffd450516df61d775cbbc4d1b9b 802 Pfam PF00723 Glycosyl hydrolases family 15 337 782 4.4E-42 T 14-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 D172_009825 0aec1ffd450516df61d775cbbc4d1b9b 802 SUPERFAMILY SSF48208 332 797 5.35E-80 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 D172_009825 0aec1ffd450516df61d775cbbc4d1b9b 802 Pfam PF09137 Glucodextranase, domain N 37 320 1.2E-77 T 14-10-2018 IPR015220 Glucodextranase, N-terminal KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 D172_009825 0aec1ffd450516df61d775cbbc4d1b9b 802 Gene3D G3DSA:1.50.10.10 329 802 2.2E-157 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 D172_009825 0aec1ffd450516df61d775cbbc4d1b9b 802 SUPERFAMILY SSF74650 35 324 5.49E-72 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 D172_001215 15eeaf57fcd9d95a990d075f9f60b3c6 344 SUPERFAMILY SSF56931 74 343 8.63E-93 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 D172_001215 15eeaf57fcd9d95a990d075f9f60b3c6 344 Gene3D G3DSA:2.40.230.10 72 344 1.4E-89 T 14-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 D172_001215 15eeaf57fcd9d95a990d075f9f60b3c6 344 Pfam PF02253 Phospholipase A1 71 340 5.1E-101 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 D172_001215 15eeaf57fcd9d95a990d075f9f60b3c6 344 PRINTS PR01486 Bacterial phospholipase A1 protein signature 124 141 1.9E-24 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 D172_001215 15eeaf57fcd9d95a990d075f9f60b3c6 344 PRINTS PR01486 Bacterial phospholipase A1 protein signature 146 162 1.9E-24 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 D172_001215 15eeaf57fcd9d95a990d075f9f60b3c6 344 PRINTS PR01486 Bacterial phospholipase A1 protein signature 313 333 1.9E-24 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 D172_001215 15eeaf57fcd9d95a990d075f9f60b3c6 344 PRINTS PR01486 Bacterial phospholipase A1 protein signature 169 188 1.9E-24 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 D172_001215 15eeaf57fcd9d95a990d075f9f60b3c6 344 PRINTS PR01486 Bacterial phospholipase A1 protein signature 215 233 1.9E-24 T 14-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 D172_000250 4c90a04c53a8826f7223553d6a2d3f44 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 17.986 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000250 4c90a04c53a8826f7223553d6a2d3f44 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 2.2E-48 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000250 4c90a04c53a8826f7223553d6a2d3f44 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 4.3E-49 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000250 4c90a04c53a8826f7223553d6a2d3f44 177 Gene3D G3DSA:1.10.520.20 2 106 1.9E-33 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000250 4c90a04c53a8826f7223553d6a2d3f44 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 2.1E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000250 4c90a04c53a8826f7223553d6a2d3f44 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 2.1E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000250 4c90a04c53a8826f7223553d6a2d3f44 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 2.1E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000250 4c90a04c53a8826f7223553d6a2d3f44 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 2.1E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000250 4c90a04c53a8826f7223553d6a2d3f44 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 2.1E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_000250 4c90a04c53a8826f7223553d6a2d3f44 177 SUPERFAMILY SSF47928 4 105 8.37E-24 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 D172_012695 1835eaf1fd3dd8b00f01e3062b7413cb 385 Gene3D G3DSA:3.40.50.1820 60 291 6.2E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_012695 1835eaf1fd3dd8b00f01e3062b7413cb 385 Pfam PF01764 Lipase (class 3) 82 207 3.1E-25 T 14-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 D172_012695 1835eaf1fd3dd8b00f01e3062b7413cb 385 SUPERFAMILY SSF53474 75 228 1.89E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_007155 e0e9bb86d49994072cc2c9be4c7c1bb4 252 Pfam PF00899 ThiF family 14 247 4.3E-61 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 D172_007155 e0e9bb86d49994072cc2c9be4c7c1bb4 252 Gene3D G3DSA:3.40.50.720 7 252 2.6E-84 T 14-10-2018 D172_007155 e0e9bb86d49994072cc2c9be4c7c1bb4 252 SUPERFAMILY SSF69572 6 251 6.8E-81 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 D172_018005 d1a39d054c5983afe8136a68d2756096 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 82 9.4E-14 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D172_018005 d1a39d054c5983afe8136a68d2756096 206 Gene3D G3DSA:3.40.30.10 4 203 2.6E-72 T 14-10-2018 D172_018005 d1a39d054c5983afe8136a68d2756096 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 135 202 2.7E-8 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal D172_018005 d1a39d054c5983afe8136a68d2756096 206 Gene3D G3DSA:1.20.1050.10 84 201 2.6E-72 T 14-10-2018 D172_018005 d1a39d054c5983afe8136a68d2756096 206 SUPERFAMILY SSF47616 81 205 2.23E-21 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D172_018005 d1a39d054c5983afe8136a68d2756096 206 SUPERFAMILY SSF52833 1 92 3.5E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_004085 3a5d828dc3e417359a15068986a9242b 82 Pfam PF10985 Protein of unknown function (DUF2805) 8 78 8.5E-30 T 14-10-2018 IPR019882 Conserved hypothetical protein CHP03643 D172_004085 3a5d828dc3e417359a15068986a9242b 82 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 7 76 2.6E-32 T 14-10-2018 IPR019882 Conserved hypothetical protein CHP03643 D172_009225 6c8900c3c92f723f3e89f90f21c0e142 254 SUPERFAMILY SSF51735 8 252 1.05E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_009225 6c8900c3c92f723f3e89f90f21c0e142 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 251 5.0E-55 T 14-10-2018 D172_009225 6c8900c3c92f723f3e89f90f21c0e142 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.7E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009225 6c8900c3c92f723f3e89f90f21c0e142 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.7E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009225 6c8900c3c92f723f3e89f90f21c0e142 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.7E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009225 6c8900c3c92f723f3e89f90f21c0e142 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.7E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009225 6c8900c3c92f723f3e89f90f21c0e142 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.7E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009225 6c8900c3c92f723f3e89f90f21c0e142 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.7E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009225 6c8900c3c92f723f3e89f90f21c0e142 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 7.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009225 6c8900c3c92f723f3e89f90f21c0e142 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 7.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009225 6c8900c3c92f723f3e89f90f21c0e142 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 7.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009225 6c8900c3c92f723f3e89f90f21c0e142 254 Gene3D G3DSA:3.40.50.720 1 252 5.7E-76 T 14-10-2018 D172_009225 6c8900c3c92f723f3e89f90f21c0e142 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D172_018610 9de00cfc7d82b30c5a0c78a1ad9549e3 717 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 700 717 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site D172_018610 9de00cfc7d82b30c5a0c78a1ad9549e3 717 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 162 2.8E-15 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_018610 9de00cfc7d82b30c5a0c78a1ad9549e3 717 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 717 3.5E-82 T 14-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 D172_018610 9de00cfc7d82b30c5a0c78a1ad9549e3 717 SUPERFAMILY SSF56935 36 717 4.88E-106 T 14-10-2018 D172_018610 9de00cfc7d82b30c5a0c78a1ad9549e3 717 Pfam PF00593 TonB dependent receptor 245 716 9.7E-46 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_018610 9de00cfc7d82b30c5a0c78a1ad9549e3 717 Gene3D G3DSA:2.40.170.20 171 717 4.1E-92 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_018610 9de00cfc7d82b30c5a0c78a1ad9549e3 717 Gene3D G3DSA:2.170.130.10 44 170 9.9E-28 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_012310 bfd979c2f2493713d66d8bf64a09a608 126 SUPERFAMILY SSF53098 5 93 5.84E-11 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_016805 6837d5e23cf31c4808aa17f5bb036d2e 236 Pfam PF03309 Type III pantothenate kinase 3 182 9.0E-35 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 D172_016805 6837d5e23cf31c4808aa17f5bb036d2e 236 Gene3D G3DSA:3.30.420.490 105 222 7.0E-48 T 14-10-2018 D172_016805 6837d5e23cf31c4808aa17f5bb036d2e 236 SUPERFAMILY SSF53067 105 233 1.42E-27 T 14-10-2018 D172_016805 6837d5e23cf31c4808aa17f5bb036d2e 236 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 234 17.152 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 D172_016805 6837d5e23cf31c4808aa17f5bb036d2e 236 Gene3D G3DSA:3.30.420.40 3 227 7.0E-48 T 14-10-2018 D172_016805 6837d5e23cf31c4808aa17f5bb036d2e 236 SUPERFAMILY SSF53067 1 101 9.39E-18 T 14-10-2018 D172_016805 6837d5e23cf31c4808aa17f5bb036d2e 236 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 227 2.7E-29 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 D172_008545 5105ab2fb31eb8537385d0a55779da23 433 Pfam PF00202 Aminotransferase class-III 28 427 5.6E-124 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D172_008545 5105ab2fb31eb8537385d0a55779da23 433 PIRSF PIRSF000521 30 429 2.6E-29 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D172_008545 5105ab2fb31eb8537385d0a55779da23 433 Gene3D G3DSA:3.90.1150.10 14 421 3.3E-157 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_008545 5105ab2fb31eb8537385d0a55779da23 433 Gene3D G3DSA:3.40.640.10 64 334 3.3E-157 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_008545 5105ab2fb31eb8537385d0a55779da23 433 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 246 283 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 D172_008545 5105ab2fb31eb8537385d0a55779da23 433 SUPERFAMILY SSF53383 10 428 1.26E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_008545 5105ab2fb31eb8537385d0a55779da23 433 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 16 427 1.0E-175 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 D172_002525 0ba9b15e7abfd191c3797ff1dfcf2b14 308 SUPERFAMILY SSF64182 3 305 4.84E-71 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily D172_002525 0ba9b15e7abfd191c3797ff1dfcf2b14 308 Gene3D G3DSA:3.90.1640.10 1 187 1.2E-66 T 14-10-2018 D172_002525 0ba9b15e7abfd191c3797ff1dfcf2b14 308 Gene3D G3DSA:3.10.310.20 188 308 3.0E-35 T 14-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 D172_002525 0ba9b15e7abfd191c3797ff1dfcf2b14 308 Pfam PF02833 DHHA2 domain 181 304 7.6E-19 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 D172_002525 0ba9b15e7abfd191c3797ff1dfcf2b14 308 SMART SM01131 179 305 5.4E-56 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 D172_002525 0ba9b15e7abfd191c3797ff1dfcf2b14 308 Pfam PF01368 DHH family 3 143 1.9E-20 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 D172_019705 22b29c3c9609106513ea84466ed653d3 511 Pfam PF00990 Diguanylate cyclase, GGDEF domain 351 506 1.1E-43 T 14-10-2018 IPR000160 GGDEF domain D172_019705 22b29c3c9609106513ea84466ed653d3 511 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 349 509 2.6E-46 T 14-10-2018 IPR000160 GGDEF domain D172_019705 22b29c3c9609106513ea84466ed653d3 511 SMART SM00267 340 510 3.9E-51 T 14-10-2018 IPR000160 GGDEF domain D172_019705 22b29c3c9609106513ea84466ed653d3 511 SUPERFAMILY SSF55073 355 509 4.16E-45 T 14-10-2018 IPR029787 Nucleotide cyclase D172_019705 22b29c3c9609106513ea84466ed653d3 511 Gene3D G3DSA:3.30.70.270 345 511 3.2E-50 T 14-10-2018 D172_005300 bbbc0f1c4803ec7a140d96e9f4e27bc8 454 SUPERFAMILY SSF53067 1 210 6.74E-27 T 14-10-2018 D172_005300 bbbc0f1c4803ec7a140d96e9f4e27bc8 454 Gene3D G3DSA:3.30.420.40 383 437 2.1E-10 T 14-10-2018 D172_005300 bbbc0f1c4803ec7a140d96e9f4e27bc8 454 Gene3D G3DSA:3.90.640.10 331 382 2.1E-10 T 14-10-2018 D172_005300 bbbc0f1c4803ec7a140d96e9f4e27bc8 454 SUPERFAMILY SSF53067 212 451 3.76E-28 T 14-10-2018 D172_005300 bbbc0f1c4803ec7a140d96e9f4e27bc8 454 Pfam PF00012 Hsp70 protein 131 240 4.7E-12 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 D172_016075 78b32b4716d907d4396095afe5002231 87 Pfam PF04380 Membrane fusogenic activity 1 78 2.4E-25 T 14-10-2018 IPR007475 Membrane fusogenic activity D172_018990 ea23370374d71e342ea6ba1775635d9f 202 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 28 194 3.4E-29 T 14-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component D172_018990 ea23370374d71e342ea6ba1775635d9f 202 SUPERFAMILY SSF159594 26 197 1.96E-17 T 14-10-2018 D172_003460 0779371582ac3df0a1f4b81fada8fa13 182 Pfam PF02470 MlaD protein 39 117 5.7E-16 T 14-10-2018 IPR003399 Mce/MlaD D172_003460 0779371582ac3df0a1f4b81fada8fa13 182 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 178 5.9E-48 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 D172_006100 9ac4a06b8e95f786a0dbd159d18241cc 254 SUPERFAMILY SSF55120 7 250 4.16E-61 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_006100 9ac4a06b8e95f786a0dbd159d18241cc 254 Gene3D G3DSA:3.30.2350.10 13 246 6.4E-60 T 14-10-2018 D172_006100 9ac4a06b8e95f786a0dbd159d18241cc 254 Pfam PF00849 RNA pseudouridylate synthase 21 181 3.2E-35 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_006100 9ac4a06b8e95f786a0dbd159d18241cc 254 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 61 75 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_015125 7540be605805269b217c989e2a914a1a 232 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 226 5.6E-46 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 D172_015125 7540be605805269b217c989e2a914a1a 232 Pfam PF01479 S4 domain 6 51 1.0E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_015125 7540be605805269b217c989e2a914a1a 232 SMART SM00363 5 62 4.3E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_015125 7540be605805269b217c989e2a914a1a 232 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 D172_015125 7540be605805269b217c989e2a914a1a 232 SUPERFAMILY SSF55120 64 230 4.5E-43 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_015125 7540be605805269b217c989e2a914a1a 232 Pfam PF00849 RNA pseudouridylate synthase 65 193 8.0E-15 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 D172_015125 7540be605805269b217c989e2a914a1a 232 Gene3D G3DSA:3.30.70.580 65 230 1.9E-55 T 14-10-2018 D172_015125 7540be605805269b217c989e2a914a1a 232 Gene3D G3DSA:3.30.70.1560 131 212 1.9E-55 T 14-10-2018 D172_015125 7540be605805269b217c989e2a914a1a 232 SUPERFAMILY SSF55174 5 92 4.86E-11 T 14-10-2018 D172_015125 7540be605805269b217c989e2a914a1a 232 Gene3D G3DSA:3.10.290.10 4 61 3.8E-14 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 D172_015375 c9263420822b2c60444835ec8292af42 198 Gene3D G3DSA:2.160.10.10 8 197 3.2E-34 T 14-10-2018 D172_015375 c9263420822b2c60444835ec8292af42 198 SUPERFAMILY SSF51161 70 192 4.84E-32 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily D172_015375 c9263420822b2c60444835ec8292af42 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 164 0.001 T 14-10-2018 IPR001451 Hexapeptide repeat D172_013860 dd7e9e7d8738e811fa9d39dba9c394dc 546 Gene3D G3DSA:2.60.40.10 122 220 1.6E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_013860 dd7e9e7d8738e811fa9d39dba9c394dc 546 Gene3D G3DSA:2.60.40.10 221 313 3.8E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_013860 dd7e9e7d8738e811fa9d39dba9c394dc 546 Pfam PF07603 Protein of unknown function (DUF1566) 385 544 5.1E-24 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 D172_005540 579fd54301763648249d8e8f6c8f0d79 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 24 242 4.2E-64 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase D172_005540 579fd54301763648249d8e8f6c8f0d79 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 241 3.0E-71 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase D172_005540 579fd54301763648249d8e8f6c8f0d79 243 Gene3D G3DSA:3.60.140.10 1 243 4.7E-86 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily D172_005540 579fd54301763648249d8e8f6c8f0d79 243 SUPERFAMILY SSF64438 3 242 2.38E-78 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic D172_002130 7d5ed5cbbe7c3d7ba831311b386f56b3 846 Gene3D G3DSA:3.20.20.450 582 840 1.3E-80 T 14-10-2018 IPR035919 EAL domain superfamily D172_002130 7d5ed5cbbe7c3d7ba831311b386f56b3 846 SUPERFAMILY SSF141868 589 838 4.84E-75 T 14-10-2018 IPR035919 EAL domain superfamily D172_002130 7d5ed5cbbe7c3d7ba831311b386f56b3 846 Pfam PF00990 Diguanylate cyclase, GGDEF domain 411 567 1.2E-7 T 14-10-2018 IPR000160 GGDEF domain D172_002130 7d5ed5cbbe7c3d7ba831311b386f56b3 846 Pfam PF07696 7TMR-DISM extracellular 2 49 178 5.7E-13 T 14-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 D172_002130 7d5ed5cbbe7c3d7ba831311b386f56b3 846 SMART SM00052 582 828 1.8E-76 T 14-10-2018 IPR001633 EAL domain D172_002130 7d5ed5cbbe7c3d7ba831311b386f56b3 846 Pfam PF07695 7TM diverse intracellular signalling 192 394 1.4E-36 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 D172_002130 7d5ed5cbbe7c3d7ba831311b386f56b3 846 SUPERFAMILY SSF55073 412 567 1.18E-7 T 14-10-2018 IPR029787 Nucleotide cyclase D172_002130 7d5ed5cbbe7c3d7ba831311b386f56b3 846 Pfam PF00563 EAL domain 588 822 2.8E-63 T 14-10-2018 IPR001633 EAL domain D172_002130 7d5ed5cbbe7c3d7ba831311b386f56b3 846 Gene3D G3DSA:2.60.40.2380 43 181 9.8E-8 T 14-10-2018 D172_002130 7d5ed5cbbe7c3d7ba831311b386f56b3 846 SMART SM00267 395 574 0.0023 T 14-10-2018 IPR000160 GGDEF domain D172_002130 7d5ed5cbbe7c3d7ba831311b386f56b3 846 Gene3D G3DSA:3.30.70.270 400 577 3.2E-12 T 14-10-2018 D172_013755 91a5e2fc5345d44181dc8e9eedba8971 316 PIRSF PIRSF005427 1 315 1.1E-91 T 14-10-2018 IPR005588 MucB/RseB D172_013755 91a5e2fc5345d44181dc8e9eedba8971 316 Pfam PF03888 MucB/RseB N-terminal domain 24 192 1.8E-56 T 14-10-2018 IPR033434 MucB/RseB, N-terminal D172_013755 91a5e2fc5345d44181dc8e9eedba8971 316 Gene3D G3DSA:2.50.20.10 22 205 1.7E-54 T 14-10-2018 D172_013755 91a5e2fc5345d44181dc8e9eedba8971 316 Gene3D G3DSA:3.30.200.100 218 315 2.5E-23 T 14-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily D172_013755 91a5e2fc5345d44181dc8e9eedba8971 316 Pfam PF17188 MucB/RseB C-terminal domain 217 312 8.4E-25 T 14-10-2018 IPR033436 MucB/RseB, C-terminal D172_018170 6285d72e3a91edaab2e3b414c15ea546 708 SUPERFAMILY SSF49899 40 329 8.27E-78 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D172_018170 6285d72e3a91edaab2e3b414c15ea546 708 Gene3D G3DSA:2.60.120.200 38 334 7.6E-88 T 14-10-2018 D172_018170 6285d72e3a91edaab2e3b414c15ea546 708 SUPERFAMILY SSF49785 540 707 5.7E-35 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_018170 6285d72e3a91edaab2e3b414c15ea546 708 Pfam PF00722 Glycosyl hydrolases family 16 78 275 1.1E-28 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 D172_018170 6285d72e3a91edaab2e3b414c15ea546 708 SUPERFAMILY SSF49785 365 537 3.83E-32 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_017830 fc348fd6fa52a0651e5b637e5b5bc7d8 488 PIRSF PIRSF002457 2 488 2.0E-136 T 14-10-2018 IPR030676 Citrate carrier CitT-related D172_017830 fc348fd6fa52a0651e5b637e5b5bc7d8 488 Pfam PF00939 Sodium:sulfate symporter transmembrane region 12 488 9.6E-143 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 D172_017830 fc348fd6fa52a0651e5b637e5b5bc7d8 488 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 27 482 3.6E-120 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 D172_004720 eb7a3b6353662fb8c15a9217b4220c3e 505 Gene3D G3DSA:3.40.50.2000 130 307 3.4E-9 T 14-10-2018 D172_004720 eb7a3b6353662fb8c15a9217b4220c3e 505 Pfam PF11997 Domain of unknown function (DUF3492) 6 288 4.8E-95 T 14-10-2018 IPR022622 Domain of unknown function DUF3492 D172_004720 eb7a3b6353662fb8c15a9217b4220c3e 505 Pfam PF00534 Glycosyl transferases group 1 316 476 6.9E-24 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 D172_004720 eb7a3b6353662fb8c15a9217b4220c3e 505 Gene3D G3DSA:3.40.50.2000 308 486 9.6E-33 T 14-10-2018 D172_004720 eb7a3b6353662fb8c15a9217b4220c3e 505 SUPERFAMILY SSF53756 9 501 1.06E-58 T 14-10-2018 D172_017315 0973b4b4482ed1f716c4325a959a8482 265 SMART SM00448 146 260 9.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_017315 0973b4b4482ed1f716c4325a959a8482 265 SMART SM00448 10 124 7.7E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_017315 0973b4b4482ed1f716c4325a959a8482 265 Pfam PF00072 Response regulator receiver domain 12 124 1.5E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_017315 0973b4b4482ed1f716c4325a959a8482 265 Pfam PF00072 Response regulator receiver domain 148 258 6.2E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_017315 0973b4b4482ed1f716c4325a959a8482 265 Gene3D G3DSA:3.40.50.2300 141 265 5.1E-30 T 14-10-2018 D172_017315 0973b4b4482ed1f716c4325a959a8482 265 Gene3D G3DSA:3.40.50.2300 6 131 1.1E-17 T 14-10-2018 D172_017315 0973b4b4482ed1f716c4325a959a8482 265 SUPERFAMILY SSF52172 146 264 5.12E-30 T 14-10-2018 IPR011006 CheY-like superfamily D172_017315 0973b4b4482ed1f716c4325a959a8482 265 SUPERFAMILY SSF52172 9 130 1.71E-19 T 14-10-2018 IPR011006 CheY-like superfamily D172_006120 6753c208a17fbdc06d0b6b51494dc30b 261 Pfam PF08241 Methyltransferase domain 74 125 2.3E-10 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 D172_006120 6753c208a17fbdc06d0b6b51494dc30b 261 SUPERFAMILY SSF53335 65 214 9.67E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_006120 6753c208a17fbdc06d0b6b51494dc30b 261 Gene3D G3DSA:3.40.50.150 16 183 3.4E-18 T 14-10-2018 D172_014715 a0b38b968390f6d601c2c70d81439c7f 278 SMART SM00382 30 209 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_014715 a0b38b968390f6d601c2c70d81439c7f 278 Gene3D G3DSA:3.40.50.300 1 240 3.7E-48 T 14-10-2018 D172_014715 a0b38b968390f6d601c2c70d81439c7f 278 SUPERFAMILY SSF52540 4 224 2.97E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_014715 a0b38b968390f6d601c2c70d81439c7f 278 Pfam PF00005 ABC transporter 21 160 9.6E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_003840 dfd45b0ae449b49b92e4ffb34a075671 333 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 2 179 1.1E-25 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase D172_020470 0a2bd489a92a8560007474c95d134773 201 SUPERFAMILY SSF51735 2 200 3.15E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_020470 0a2bd489a92a8560007474c95d134773 201 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 35 159 3.4E-11 T 14-10-2018 D172_020470 0a2bd489a92a8560007474c95d134773 201 Gene3D G3DSA:3.40.50.720 1 199 3.2E-30 T 14-10-2018 D172_003355 75f554465014fd2b0204b47d8bb6f474 328 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 8 328 3.8E-149 T 14-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 D172_003355 75f554465014fd2b0204b47d8bb6f474 328 PIRSF PIRSF029693 2 328 7.9E-146 T 14-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 D172_011515 0c67eaef5f5a168d3b0f999e0fce83b8 352 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 3.1E-129 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 D172_011515 0c67eaef5f5a168d3b0f999e0fce83b8 352 Pfam PF03116 NQR2, RnfD, RnfE family 5 347 1.4E-101 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 D172_011515 0c67eaef5f5a168d3b0f999e0fce83b8 352 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 349 26.677 T 14-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 D172_015815 2d6f0b8f07bca83fdba838ae35ab7908 227 Pfam PF00834 Ribulose-phosphate 3 epimerase family 10 207 2.4E-89 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 D172_015815 2d6f0b8f07bca83fdba838ae35ab7908 227 Gene3D G3DSA:3.20.20.70 9 225 8.3E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_015815 2d6f0b8f07bca83fdba838ae35ab7908 227 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 9 220 2.6E-96 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 D172_015815 2d6f0b8f07bca83fdba838ae35ab7908 227 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 37 51 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 D172_015815 2d6f0b8f07bca83fdba838ae35ab7908 227 SUPERFAMILY SSF51366 7 221 1.04E-75 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 D172_015815 2d6f0b8f07bca83fdba838ae35ab7908 227 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 140 162 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 D172_015815 2d6f0b8f07bca83fdba838ae35ab7908 227 PIRSF PIRSF001461 4 227 2.0E-104 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 D172_021075 63bd627526ff4504bed47af842a8db5a 561 Pfam PF00149 Calcineurin-like phosphoesterase 5 336 6.2E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D172_021075 63bd627526ff4504bed47af842a8db5a 561 SUPERFAMILY SSF56300 3 339 4.21E-24 T 14-10-2018 D172_021075 63bd627526ff4504bed47af842a8db5a 561 Gene3D G3DSA:3.60.21.10 189 396 1.5E-32 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like D172_021075 63bd627526ff4504bed47af842a8db5a 561 Gene3D G3DSA:3.60.21.10 2 148 7.1E-12 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like D172_007660 737d2704961443c5100236e9645f0106 507 SUPERFAMILY SSF53649 35 493 1.0E-101 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D172_007660 737d2704961443c5100236e9645f0106 507 ProSitePatterns PS00523 Sulfatases signature 1. 82 94 - T 14-10-2018 IPR024607 Sulfatase, conserved site D172_007660 737d2704961443c5100236e9645f0106 507 Gene3D G3DSA:3.40.720.10 36 505 8.9E-106 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D172_007660 737d2704961443c5100236e9645f0106 507 Pfam PF16347 Domain of unknown function (DUF4976) 397 488 3.7E-7 T 14-10-2018 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096|Reactome: R-HSA-2206307 D172_007660 737d2704961443c5100236e9645f0106 507 Pfam PF00884 Sulfatase 37 388 6.4E-50 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 D172_006005 aa382a5f00f33232927402aa802285a2 784 ProSitePatterns PS00116 DNA polymerase family B signature. 544 552 - T 14-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_006005 aa382a5f00f33232927402aa802285a2 784 SUPERFAMILY SSF53098 8 391 3.8E-80 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_006005 aa382a5f00f33232927402aa802285a2 784 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 418 431 2.7E-11 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_006005 aa382a5f00f33232927402aa802285a2 784 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 542 550 2.7E-11 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_006005 aa382a5f00f33232927402aa802285a2 784 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 490 502 2.7E-11 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_006005 aa382a5f00f33232927402aa802285a2 784 Gene3D G3DSA:3.30.420.10 160 349 1.7E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_006005 aa382a5f00f33232927402aa802285a2 784 SMART SM00486 157 556 3.1E-59 T 14-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_006005 aa382a5f00f33232927402aa802285a2 784 Pfam PF00136 DNA polymerase family B 378 741 2.9E-45 T 14-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_006005 aa382a5f00f33232927402aa802285a2 784 SUPERFAMILY SSF56672 387 772 1.84E-105 T 14-10-2018 D172_006005 aa382a5f00f33232927402aa802285a2 784 Gene3D G3DSA:2.40.50.590 8 157 4.7E-45 T 14-10-2018 D172_006005 aa382a5f00f33232927402aa802285a2 784 Gene3D G3DSA:3.90.1600.10 350 445 9.0E-28 T 14-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_006005 aa382a5f00f33232927402aa802285a2 784 Gene3D G3DSA:3.90.1600.10 455 634 1.3E-48 T 14-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_006005 aa382a5f00f33232927402aa802285a2 784 Gene3D G3DSA:1.10.132.60 641 784 1.0E-38 T 14-10-2018 D172_006005 aa382a5f00f33232927402aa802285a2 784 Gene3D G3DSA:3.30.70.2250 45 111 4.7E-45 T 14-10-2018 D172_006005 aa382a5f00f33232927402aa802285a2 784 Pfam PF03104 DNA polymerase family B, exonuclease domain 77 299 5.1E-20 T 14-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 D172_010900 4a733890015d833657116cf150644b53 400 Gene3D G3DSA:1.20.1720.10 13 389 1.4E-80 T 14-10-2018 D172_010900 4a733890015d833657116cf150644b53 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 12 385 1.5E-77 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 D172_010900 4a733890015d833657116cf150644b53 400 Pfam PF07690 Major Facilitator Superfamily 18 358 4.2E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_010900 4a733890015d833657116cf150644b53 400 SUPERFAMILY SSF103473 6 396 8.76E-53 T 14-10-2018 IPR036259 MFS transporter superfamily D172_008235 f1a07a55b23f3c34ef88c5ced5bff83a 773 SUPERFAMILY SSF82866 183 379 1.18E-26 T 14-10-2018 D172_008235 f1a07a55b23f3c34ef88c5ced5bff83a 773 Gene3D G3DSA:1.20.1640.10 203 388 7.0E-8 T 14-10-2018 D172_008235 f1a07a55b23f3c34ef88c5ced5bff83a 773 Gene3D G3DSA:1.20.1640.10 588 773 1.8E-9 T 14-10-2018 D172_008235 f1a07a55b23f3c34ef88c5ced5bff83a 773 Pfam PF02460 Patched family 162 295 2.5E-6 T 14-10-2018 IPR003392 Protein patched/dispatched GO:0016021 D172_008235 f1a07a55b23f3c34ef88c5ced5bff83a 773 Pfam PF03176 MMPL family 542 766 2.0E-12 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 D172_008235 f1a07a55b23f3c34ef88c5ced5bff83a 773 SUPERFAMILY SSF82866 611 768 6.54E-28 T 14-10-2018 D172_001730 3fbdf2edaa868a1d8d857dcf05ff4a30 87 SUPERFAMILY SSF50182 7 69 2.05E-24 T 14-10-2018 IPR010920 LSM domain superfamily D172_001730 3fbdf2edaa868a1d8d857dcf05ff4a30 87 Gene3D G3DSA:2.30.30.100 1 71 1.2E-33 T 14-10-2018 D172_001730 3fbdf2edaa868a1d8d857dcf05ff4a30 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.638 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 D172_001730 3fbdf2edaa868a1d8d857dcf05ff4a30 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 4.7E-30 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 D172_001730 3fbdf2edaa868a1d8d857dcf05ff4a30 87 Pfam PF17209 Hfq protein 7 68 6.1E-31 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 D172_005310 37bb155af6571f00ea3fdb58086c5a37 214 Pfam PF01810 LysE type translocator 17 213 1.4E-33 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D172_005310 37bb155af6571f00ea3fdb58086c5a37 214 PIRSF PIRSF006324 1 214 2.2E-63 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D172_018135 93e364616b7f250ef08d2aa34e49f4cf 185 Pfam PF00593 TonB dependent receptor 52 184 2.4E-8 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_018135 93e364616b7f250ef08d2aa34e49f4cf 185 SUPERFAMILY SSF56935 23 185 1.8E-13 T 14-10-2018 D172_018135 93e364616b7f250ef08d2aa34e49f4cf 185 Gene3D G3DSA:2.40.170.20 16 185 3.9E-12 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_011810 51619891c0a83d940deca15f8d4d0850 243 SUPERFAMILY SSF75217 98 242 9.81E-34 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases D172_011810 51619891c0a83d940deca15f8d4d0850 243 SUPERFAMILY SSF55315 4 93 4.0E-12 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like D172_011810 51619891c0a83d940deca15f8d4d0850 243 Gene3D G3DSA:3.30.1330.30 1 94 4.5E-17 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like D172_011810 51619891c0a83d940deca15f8d4d0850 243 Pfam PF00588 SpoU rRNA Methylase family 102 236 3.0E-29 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 D172_011810 51619891c0a83d940deca15f8d4d0850 243 Gene3D G3DSA:3.40.1280.10 96 243 5.8E-41 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal D172_004835 a82c14b370dd5be6a69b1f54deaa2d85 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 81 90 1.5E-31 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D172_004835 a82c14b370dd5be6a69b1f54deaa2d85 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 42 64 1.5E-31 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D172_004835 a82c14b370dd5be6a69b1f54deaa2d85 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 135 152 1.5E-31 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D172_004835 a82c14b370dd5be6a69b1f54deaa2d85 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 230 239 1.5E-31 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D172_004835 a82c14b370dd5be6a69b1f54deaa2d85 338 PRINTS PR00101 Aspartate carbamoyltransferase signature 297 311 1.5E-31 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D172_004835 a82c14b370dd5be6a69b1f54deaa2d85 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D172_004835 a82c14b370dd5be6a69b1f54deaa2d85 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.5E-44 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 D172_004835 a82c14b370dd5be6a69b1f54deaa2d85 338 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 315 4.5E-90 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 D172_004835 a82c14b370dd5be6a69b1f54deaa2d85 338 Gene3D G3DSA:3.40.50.1370 8 312 1.4E-99 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D172_004835 a82c14b370dd5be6a69b1f54deaa2d85 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 2.2E-19 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D172_004835 a82c14b370dd5be6a69b1f54deaa2d85 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 2.2E-19 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D172_004835 a82c14b370dd5be6a69b1f54deaa2d85 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 281 304 2.2E-19 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D172_004835 a82c14b370dd5be6a69b1f54deaa2d85 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 2.2E-19 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 D172_004835 a82c14b370dd5be6a69b1f54deaa2d85 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 159 314 6.8E-24 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 D172_004835 a82c14b370dd5be6a69b1f54deaa2d85 338 Gene3D G3DSA:3.40.50.1370 136 303 1.4E-99 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D172_004835 a82c14b370dd5be6a69b1f54deaa2d85 338 SUPERFAMILY SSF53671 2 317 1.05E-85 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 D172_005750 cf94cb88e9948518a1b0efbf7a4005bb 226 Gene3D G3DSA:2.60.120.330 25 223 1.3E-49 T 14-10-2018 IPR027443 Isopenicillin N synthase-like D172_005750 cf94cb88e9948518a1b0efbf7a4005bb 226 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 92 197 1.4E-16 T 14-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 D172_005750 cf94cb88e9948518a1b0efbf7a4005bb 226 SUPERFAMILY SSF51197 24 213 4.39E-53 T 14-10-2018 D172_007790 f7e7c213bd34c7b104282cf3786ef330 255 Gene3D G3DSA:3.90.850.10 2 254 7.0E-38 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 D172_007790 f7e7c213bd34c7b104282cf3786ef330 255 SUPERFAMILY SSF56529 7 252 6.8E-27 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 D172_016715 6729d0165a50dc2302c78fa668525456 377 PIRSF PIRSF000345 4 333 1.4E-94 T 14-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 D172_016715 6729d0165a50dc2302c78fa668525456 377 PRINTS PR00075 Fatty acid desaturase family 1 signature 186 207 1.4E-26 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 D172_016715 6729d0165a50dc2302c78fa668525456 377 PRINTS PR00075 Fatty acid desaturase family 1 signature 58 78 1.4E-26 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 D172_016715 6729d0165a50dc2302c78fa668525456 377 PRINTS PR00075 Fatty acid desaturase family 1 signature 8 28 1.4E-26 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 D172_016715 6729d0165a50dc2302c78fa668525456 377 PRINTS PR00075 Fatty acid desaturase family 1 signature 96 125 1.4E-26 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 D172_016715 6729d0165a50dc2302c78fa668525456 377 PRINTS PR00075 Fatty acid desaturase family 1 signature 229 243 1.4E-26 T 14-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 D172_016715 6729d0165a50dc2302c78fa668525456 377 Pfam PF00487 Fatty acid desaturase 38 262 6.7E-20 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 D172_012765 deaa47901834e7bbe8fef6972a747af6 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 1.2E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 D172_012765 deaa47901834e7bbe8fef6972a747af6 330 Pfam PF00005 ABC transporter 24 186 5.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_012765 deaa47901834e7bbe8fef6972a747af6 330 SUPERFAMILY SSF52540 3 258 3.0E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_012765 deaa47901834e7bbe8fef6972a747af6 330 Gene3D G3DSA:3.40.50.300 1 328 2.1E-77 T 14-10-2018 D172_012765 deaa47901834e7bbe8fef6972a747af6 330 SMART SM00382 32 238 8.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_012765 deaa47901834e7bbe8fef6972a747af6 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 323 6.2E-22 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 D172_020290 522c59e0d3feff9eac3d2aafa9ef86e3 250 SUPERFAMILY SSF53448 6 198 3.66E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_020290 522c59e0d3feff9eac3d2aafa9ef86e3 250 Pfam PF00535 Glycosyl transferase family 2 9 167 2.0E-13 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D172_020290 522c59e0d3feff9eac3d2aafa9ef86e3 250 Gene3D G3DSA:3.90.550.10 2 248 3.8E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_017685 873e0c8ebf5231a0fbbcb8f862d3d049 160 Gene3D G3DSA:1.10.1660.10 3 136 1.3E-33 T 14-10-2018 D172_017685 873e0c8ebf5231a0fbbcb8f862d3d049 160 SUPERFAMILY SSF46955 13 135 2.31E-28 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily D172_017685 873e0c8ebf5231a0fbbcb8f862d3d049 160 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 25 38 3.8E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_017685 873e0c8ebf5231a0fbbcb8f862d3d049 160 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 25 3.8E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_017685 873e0c8ebf5231a0fbbcb8f862d3d049 160 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 48 68 3.8E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_017685 873e0c8ebf5231a0fbbcb8f862d3d049 160 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 13 151 1.9E-64 T 14-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 D172_017685 873e0c8ebf5231a0fbbcb8f862d3d049 160 Pfam PF00376 MerR family regulatory protein 14 50 8.5E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_017685 873e0c8ebf5231a0fbbcb8f862d3d049 160 SMART SM00422 13 81 4.9E-20 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_017685 873e0c8ebf5231a0fbbcb8f862d3d049 160 Pfam PF09278 MerR, DNA binding 55 119 2.3E-17 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding D172_000095 b51f20960868db04339c35071d77be4e 70 ProSitePatterns PS00018 EF-hand calcium-binding domain. 55 67 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_000095 b51f20960868db04339c35071d77be4e 70 Pfam PF00036 EF hand 47 69 4.4E-6 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_000095 b51f20960868db04339c35071d77be4e 70 SUPERFAMILY SSF47473 14 69 8.85E-11 T 14-10-2018 IPR011992 EF-hand domain pair D172_000095 b51f20960868db04339c35071d77be4e 70 Gene3D G3DSA:1.10.238.10 13 70 2.1E-10 T 14-10-2018 D172_000095 b51f20960868db04339c35071d77be4e 70 Pfam PF13202 EF hand 24 40 0.0089 T 14-10-2018 IPR002048 EF-hand domain GO:0005509 D172_000995 e310c8ed6b8b3e7f29c54a994338aa3b 358 Pfam PF00571 CBS domain 265 314 1.4E-7 T 14-10-2018 IPR000644 CBS domain D172_000995 e310c8ed6b8b3e7f29c54a994338aa3b 358 SUPERFAMILY SSF54631 181 315 3.79E-26 T 14-10-2018 D172_000995 e310c8ed6b8b3e7f29c54a994338aa3b 358 SMART SM00116 266 314 6.3E-4 T 14-10-2018 IPR000644 CBS domain D172_000995 e310c8ed6b8b3e7f29c54a994338aa3b 358 Gene3D G3DSA:3.10.580.10 174 325 2.5E-39 T 14-10-2018 D172_000995 e310c8ed6b8b3e7f29c54a994338aa3b 358 Pfam PF01595 Domain of unknown function DUF21 8 179 4.7E-33 T 14-10-2018 IPR002550 CNNM, transmembrane domain D172_020065 cd74a4f998ae1e8db43f13c427da940b 303 PIRSF PIRSF028188 1 303 2.7E-111 T 14-10-2018 IPR014541 Predicted amidinotransferase, FN0238 type D172_020065 cd74a4f998ae1e8db43f13c427da940b 303 Pfam PF02274 Amidinotransferase 13 299 7.7E-65 T 14-10-2018 D172_020065 cd74a4f998ae1e8db43f13c427da940b 303 SUPERFAMILY SSF55909 9 296 1.09E-40 T 14-10-2018 D172_020065 cd74a4f998ae1e8db43f13c427da940b 303 Gene3D G3DSA:3.75.10.10 15 295 5.7E-42 T 14-10-2018 D172_017590 a5ac9e511a6847c5be3f2b6b31848d5d 329 Pfam PF06996 Type VI secretion, TssG 9 312 2.5E-72 T 14-10-2018 IPR010732 Type VI secretion, TssG-like D172_017590 a5ac9e511a6847c5be3f2b6b31848d5d 329 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 9 312 1.8E-64 T 14-10-2018 IPR010732 Type VI secretion, TssG-like D172_012960 80f559f8dc6979e9f5f6523e8f2e9034 250 Pfam PF11859 Protein of unknown function (DUF3379) 1 246 5.1E-72 T 14-10-2018 IPR021806 Protein of unknown function DUF3379 D172_004780 646d309412e33962ba7b197a29ed2507 507 SUPERFAMILY SSF55154 1 219 2.13E-42 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 D172_004780 646d309412e33962ba7b197a29ed2507 507 Pfam PF01928 CYTH domain 3 199 2.4E-22 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 D172_004780 646d309412e33962ba7b197a29ed2507 507 Gene3D G3DSA:1.40.20.10 264 408 3.7E-8 T 14-10-2018 IPR038186 CHAD domain superfamily D172_004780 646d309412e33962ba7b197a29ed2507 507 Gene3D G3DSA:2.40.320.10 1 202 2.4E-29 T 14-10-2018 D172_004780 646d309412e33962ba7b197a29ed2507 507 SMART SM01118 2 205 6.2E-33 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 D172_004780 646d309412e33962ba7b197a29ed2507 507 Pfam PF05235 CHAD domain 265 398 3.8E-7 T 14-10-2018 IPR007899 CHAD domain D172_001855 c24faef71a65f46cca4bceff88d6143e 279 SUPERFAMILY SSF51556 4 277 1.28E-33 T 14-10-2018 IPR032466 Metal-dependent hydrolase D172_001855 c24faef71a65f46cca4bceff88d6143e 279 Gene3D G3DSA:3.20.20.140 2 279 2.1E-42 T 14-10-2018 D172_001855 c24faef71a65f46cca4bceff88d6143e 279 Pfam PF04909 Amidohydrolase 150 277 3.9E-12 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 D172_014395 dbf9b0b85e1aec1a62cd0a0c25c7723b 188 Gene3D G3DSA:3.40.50.2020 1 181 6.0E-34 T 14-10-2018 D172_014395 dbf9b0b85e1aec1a62cd0a0c25c7723b 188 Pfam PF00156 Phosphoribosyl transferase domain 12 162 5.0E-11 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 D172_014395 dbf9b0b85e1aec1a62cd0a0c25c7723b 188 SUPERFAMILY SSF53271 3 162 9.42E-29 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like D172_003370 85ebec17da75ab91dfa5fc8a601cbaef 169 SUPERFAMILY SSF55961 8 148 4.4E-10 T 14-10-2018 D172_003370 85ebec17da75ab91dfa5fc8a601cbaef 169 Gene3D G3DSA:3.30.530.20 7 149 9.4E-6 T 14-10-2018 IPR023393 START-like domain superfamily D172_003370 85ebec17da75ab91dfa5fc8a601cbaef 169 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 7 148 1.7E-7 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase D172_020530 38b9b0613bd98849c327df15b7c98f8d 726 SUPERFAMILY SSF51645 4 724 1.44E-284 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 D172_020530 38b9b0613bd98849c327df15b7c98f8d 726 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 5 725 0.0 T 14-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 D172_020530 38b9b0613bd98849c327df15b7c98f8d 726 Pfam PF01274 Malate synthase 18 699 1.3E-158 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 D172_020530 38b9b0613bd98849c327df15b7c98f8d 726 Gene3D G3DSA:2.170.170.11 133 262 9.1E-268 T 14-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 D172_020530 38b9b0613bd98849c327df15b7c98f8d 726 Gene3D G3DSA:1.20.1220.12 583 726 1.4E-64 T 14-10-2018 D172_020530 38b9b0613bd98849c327df15b7c98f8d 726 Gene3D G3DSA:3.20.20.360 8 578 9.1E-268 T 14-10-2018 D172_020530 38b9b0613bd98849c327df15b7c98f8d 726 Hamap MF_00641 Malate synthase G [glcB]. 1 726 357.926 T 14-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 D172_009005 1a210839bd87bee09dbed9a27f201edf 263 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 D172_009005 1a210839bd87bee09dbed9a27f201edf 263 Gene3D G3DSA:3.90.226.10 6 262 4.5E-82 T 14-10-2018 D172_009005 1a210839bd87bee09dbed9a27f201edf 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 261 3.5E-60 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 D172_009005 1a210839bd87bee09dbed9a27f201edf 263 SUPERFAMILY SSF52096 7 262 1.29E-80 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_000550 64bbf157a1c6eb8337c73317e3732339 938 Pfam PF07676 WD40-like Beta Propeller Repeat 507 539 0.05 T 14-10-2018 IPR011659 WD40-like Beta Propeller D172_000550 64bbf157a1c6eb8337c73317e3732339 938 Gene3D G3DSA:2.120.10.30 459 647 1.0E-13 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_000550 64bbf157a1c6eb8337c73317e3732339 938 SUPERFAMILY SSF82171 285 578 5.49E-22 T 14-10-2018 D172_000550 64bbf157a1c6eb8337c73317e3732339 938 SUPERFAMILY SSF103515 668 771 2.22E-5 T 14-10-2018 IPR036709 Autotransporter beta-domain superfamily D172_006245 bf18b2bf02e3f05fc9611c90448cd252 166 Pfam PF01863 Protein of unknown function DUF45 93 151 6.0E-12 T 14-10-2018 IPR002725 Protein of unknown function DUF45 D172_006245 bf18b2bf02e3f05fc9611c90448cd252 166 Gene3D G3DSA:3.30.2010.10 79 158 5.2E-8 T 14-10-2018 D172_017135 987d008e09027cd31839fc871f47e0f4 374 SUPERFAMILY SSF53383 3 371 1.0E-62 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_017135 987d008e09027cd31839fc871f47e0f4 374 Gene3D G3DSA:3.40.640.10 23 283 4.0E-56 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_017135 987d008e09027cd31839fc871f47e0f4 374 Gene3D G3DSA:3.90.1150.10 12 362 4.0E-56 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_017135 987d008e09027cd31839fc871f47e0f4 374 Pfam PF00266 Aminotransferase class-V 24 362 6.0E-27 T 14-10-2018 IPR000192 Aminotransferase class V domain D172_016545 9c4b5cf37060f3f96277d1f1e925f798 161 SMART SM00260 18 159 1.3E-37 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D172_016545 9c4b5cf37060f3f96277d1f1e925f798 161 Gene3D G3DSA:2.30.30.40 24 153 2.7E-39 T 14-10-2018 D172_016545 9c4b5cf37060f3f96277d1f1e925f798 161 Gene3D G3DSA:2.40.50.180 41 154 2.7E-39 T 14-10-2018 D172_016545 9c4b5cf37060f3f96277d1f1e925f798 161 SUPERFAMILY SSF50341 12 157 2.35E-35 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 D172_016545 9c4b5cf37060f3f96277d1f1e925f798 161 Pfam PF01584 CheW-like domain 22 159 3.2E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D172_012530 e83b1135fc9de979cc491322ac3f0551 374 Gene3D G3DSA:1.10.10.60 261 314 1.8E-9 T 14-10-2018 D172_012530 e83b1135fc9de979cc491322ac3f0551 374 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 335 350 3.3E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D172_012530 e83b1135fc9de979cc491322ac3f0551 374 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 350 366 3.3E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 D172_012530 e83b1135fc9de979cc491322ac3f0551 374 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 319 362 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D172_012530 e83b1135fc9de979cc491322ac3f0551 374 SMART SM00342 282 366 3.1E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_012530 e83b1135fc9de979cc491322ac3f0551 374 Pfam PF12833 Helix-turn-helix domain 288 368 2.6E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_012530 e83b1135fc9de979cc491322ac3f0551 374 Gene3D G3DSA:1.10.10.60 315 372 5.0E-17 T 14-10-2018 D172_012530 e83b1135fc9de979cc491322ac3f0551 374 SUPERFAMILY SSF46689 320 369 7.17E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_004335 66bc3f542d33fb4e1af35580e34420f2 360 Pfam PF01548 Transposase 24 161 1.1E-10 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D172_004335 66bc3f542d33fb4e1af35580e34420f2 360 Pfam PF02371 Transposase IS116/IS110/IS902 family 226 306 5.9E-21 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D172_019870 3b12d0b2f9d27f182e93704a781f2016 234 Gene3D G3DSA:3.30.750.120 1 116 1.1E-32 T 14-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily D172_019870 3b12d0b2f9d27f182e93704a781f2016 234 SUPERFAMILY SSF63848 127 230 1.7E-30 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 D172_019870 3b12d0b2f9d27f182e93704a781f2016 234 Gene3D G3DSA:2.160.20.70 125 233 2.5E-30 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 D172_019870 3b12d0b2f9d27f182e93704a781f2016 234 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 128 228 6.9E-32 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 D172_019870 3b12d0b2f9d27f182e93704a781f2016 234 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 231 1.1E-67 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 D172_019870 3b12d0b2f9d27f182e93704a781f2016 234 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 3.3E-19 T 14-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 D172_019870 3b12d0b2f9d27f182e93704a781f2016 234 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 232 26.515 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 D172_011430 56c6ebbf87a6a7ab4aab82f53bbd4ba1 218 Gene3D G3DSA:3.40.50.620 2 215 5.1E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_011430 56c6ebbf87a6a7ab4aab82f53bbd4ba1 218 PIRSF PIRSF006293 1 218 1.6E-77 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 D172_011430 56c6ebbf87a6a7ab4aab82f53bbd4ba1 218 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 202 7.5E-64 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 D172_011430 56c6ebbf87a6a7ab4aab82f53bbd4ba1 218 Pfam PF06508 Queuosine biosynthesis protein QueC 4 207 5.4E-67 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 D172_011430 56c6ebbf87a6a7ab4aab82f53bbd4ba1 218 SUPERFAMILY SSF52402 3 217 1.76E-63 T 14-10-2018 D172_011430 56c6ebbf87a6a7ab4aab82f53bbd4ba1 218 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 215 50.583 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 D172_015955 d4013154065dbaa2132841332106ef01 415 Gene3D G3DSA:2.30.40.10 19 410 8.6E-166 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D172_015955 d4013154065dbaa2132841332106ef01 415 SUPERFAMILY SSF51338 13 414 2.88E-27 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D172_015955 d4013154065dbaa2132841332106ef01 415 SUPERFAMILY SSF51556 77 374 3.14E-84 T 14-10-2018 IPR032466 Metal-dependent hydrolase D172_015955 d4013154065dbaa2132841332106ef01 415 Pfam PF01979 Amidohydrolase family 75 392 1.5E-17 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 D172_015955 d4013154065dbaa2132841332106ef01 415 TIGRFAM TIGR01224 hutI: imidazolonepropionase 36 407 3.4E-144 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D172_015955 d4013154065dbaa2132841332106ef01 415 Hamap MF_00372 Imidazolonepropionase [hutI]. 14 415 42.119 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D172_015955 d4013154065dbaa2132841332106ef01 415 Gene3D G3DSA:3.20.20.140 78 375 8.6E-166 T 14-10-2018 D172_017295 5571f020d09ef75e86e2170ec7063072 299 Pfam PF03466 LysR substrate binding domain 88 285 3.9E-40 T 14-10-2018 IPR005119 LysR, substrate-binding D172_017295 5571f020d09ef75e86e2170ec7063072 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 3.3E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_017295 5571f020d09ef75e86e2170ec7063072 299 SUPERFAMILY SSF46785 5 88 5.44E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_017295 5571f020d09ef75e86e2170ec7063072 299 Gene3D G3DSA:3.40.190.290 91 288 8.7E-57 T 14-10-2018 D172_017295 5571f020d09ef75e86e2170ec7063072 299 SUPERFAMILY SSF53850 89 290 8.14E-42 T 14-10-2018 D172_017295 5571f020d09ef75e86e2170ec7063072 299 Gene3D G3DSA:1.10.10.10 3 89 4.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_014080 ae8a9018fc2ab7dd2e073962c05c0905 721 SUPERFAMILY SSF49299 513 580 1.7E-17 T 14-10-2018 IPR035986 PKD domain superfamily D172_014080 ae8a9018fc2ab7dd2e073962c05c0905 721 Gene3D G3DSA:3.10.170.10 170 350 4.6E-39 T 14-10-2018 D172_014080 ae8a9018fc2ab7dd2e073962c05c0905 721 SMART SM00089 504 581 5.0E-12 T 14-10-2018 IPR022409 PKD/Chitinase domain D172_014080 ae8a9018fc2ab7dd2e073962c05c0905 721 SUPERFAMILY SSF55486 224 496 2.01E-41 T 14-10-2018 D172_014080 ae8a9018fc2ab7dd2e073962c05c0905 721 Gene3D G3DSA:1.10.390.10 360 499 4.4E-16 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily D172_014080 ae8a9018fc2ab7dd2e073962c05c0905 721 Pfam PF00801 PKD domain 517 565 1.5E-10 T 14-10-2018 IPR000601 PKD domain D172_014080 ae8a9018fc2ab7dd2e073962c05c0905 721 Gene3D G3DSA:2.60.40.10 504 581 3.6E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_014080 ae8a9018fc2ab7dd2e073962c05c0905 721 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 191 346 3.3E-16 T 14-10-2018 IPR013856 Peptidase M4 domain GO:0004222 D172_020545 41eea032d5148f1d46209b51d6506084 436 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 8 355 6.1E-120 T 14-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase D172_020545 41eea032d5148f1d46209b51d6506084 436 SUPERFAMILY SSF51905 7 247 4.24E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_020545 41eea032d5148f1d46209b51d6506084 436 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 2.0E-5 T 14-10-2018 D172_020545 41eea032d5148f1d46209b51d6506084 436 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 2.0E-5 T 14-10-2018 D172_020545 41eea032d5148f1d46209b51d6506084 436 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 207 225 2.0E-5 T 14-10-2018 D172_020545 41eea032d5148f1d46209b51d6506084 436 Gene3D G3DSA:3.50.50.60 8 435 2.3E-147 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_020545 41eea032d5148f1d46209b51d6506084 436 SUPERFAMILY SSF51905 205 385 1.11E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_009635 9122406b49f2df86eca089b19c597c50 280 SUPERFAMILY SSF53474 2 278 1.18E-87 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_009635 9122406b49f2df86eca089b19c597c50 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 4 276 5.0E-113 T 14-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 D172_009635 9122406b49f2df86eca089b19c597c50 280 Pfam PF00756 Putative esterase 22 271 2.1E-60 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 D172_009635 9122406b49f2df86eca089b19c597c50 280 Gene3D G3DSA:3.40.50.1820 2 280 1.6E-94 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_004415 911b76fb5f8d12f6466b12e635fd4821 272 PIRSF PIRSF000441 3 59 450.0 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 D172_004415 911b76fb5f8d12f6466b12e635fd4821 272 PIRSF PIRSF000441 71 270 4.5E-65 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 D172_004415 911b76fb5f8d12f6466b12e635fd4821 272 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 198 226 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 D172_004415 911b76fb5f8d12f6466b12e635fd4821 272 SMART SM00971 5 109 8.4E-55 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 D172_004415 911b76fb5f8d12f6466b12e635fd4821 272 SUPERFAMILY SSF51161 4 253 5.13E-63 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily D172_004415 911b76fb5f8d12f6466b12e635fd4821 272 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 189 222 1.6E-8 T 14-10-2018 IPR001451 Hexapeptide repeat D172_004415 911b76fb5f8d12f6466b12e635fd4821 272 Gene3D G3DSA:1.10.3130.10 1 138 1.0E-48 T 14-10-2018 D172_004415 911b76fb5f8d12f6466b12e635fd4821 272 Pfam PF06426 Serine acetyltransferase, N-terminal 5 109 3.0E-35 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 D172_004415 911b76fb5f8d12f6466b12e635fd4821 272 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 77 238 8.2E-74 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 D172_004415 911b76fb5f8d12f6466b12e635fd4821 272 Gene3D G3DSA:2.160.10.10 139 264 8.7E-37 T 14-10-2018 D172_018275 c09614200fa1f0705c62b3708bde041b 409 Pfam PF13692 Glycosyl transferases group 1 197 334 9.1E-20 T 14-10-2018 D172_018275 c09614200fa1f0705c62b3708bde041b 409 Gene3D G3DSA:3.40.50.2000 184 347 2.3E-11 T 14-10-2018 D172_018275 c09614200fa1f0705c62b3708bde041b 409 SUPERFAMILY SSF53756 4 348 1.57E-20 T 14-10-2018 D172_019450 b02e2d68b941b36af832ff5a35249fc7 275 SUPERFAMILY SSF53850 62 229 4.15E-9 T 14-10-2018 D172_004115 4a56d4dd046c8016fd35018991b8b8a5 346 Gene3D G3DSA:3.20.20.70 2 345 5.4E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_004115 4a56d4dd046c8016fd35018991b8b8a5 346 Pfam PF03060 Nitronate monooxygenase 5 341 3.4E-67 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 D172_004115 4a56d4dd046c8016fd35018991b8b8a5 346 SUPERFAMILY SSF51412 7 323 1.43E-55 T 14-10-2018 D172_008280 0dcfa58e8a64c2acfb74d7d902762951 755 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 239 422 8.8E-23 T 14-10-2018 IPR004477 ComEC/Rec2-related protein D172_008280 0dcfa58e8a64c2acfb74d7d902762951 755 Gene3D G3DSA:3.60.15.10 511 744 3.8E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_008280 0dcfa58e8a64c2acfb74d7d902762951 755 SUPERFAMILY SSF56281 509 742 3.92E-36 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like D172_008280 0dcfa58e8a64c2acfb74d7d902762951 755 Pfam PF13567 Domain of unknown function (DUF4131) 15 178 2.7E-6 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 D172_008280 0dcfa58e8a64c2acfb74d7d902762951 755 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 118 728 5.6E-97 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 D172_008280 0dcfa58e8a64c2acfb74d7d902762951 755 Pfam PF03772 Competence protein 217 488 2.9E-52 T 14-10-2018 IPR004477 ComEC/Rec2-related protein D172_008280 0dcfa58e8a64c2acfb74d7d902762951 755 Pfam PF00753 Metallo-beta-lactamase superfamily 520 586 1.3E-5 T 14-10-2018 IPR001279 Metallo-beta-lactamase D172_008560 29ea000767fcb45761d62347d4f02402 291 SUPERFAMILY SSF53335 48 224 1.79E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_008560 29ea000767fcb45761d62347d4f02402 291 Gene3D G3DSA:3.40.50.150 61 253 1.3E-24 T 14-10-2018 D172_008560 29ea000767fcb45761d62347d4f02402 291 Pfam PF08241 Methyltransferase domain 86 173 4.3E-14 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 D172_020385 5c94d5f51183541efed936afc5515fe6 234 SMART SM00855 3 173 0.0012 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D172_020385 5c94d5f51183541efed936afc5515fe6 234 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 84 1.0E-9 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D172_020385 5c94d5f51183541efed936afc5515fe6 234 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 124 206 4.9E-11 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 D172_020385 5c94d5f51183541efed936afc5515fe6 234 SUPERFAMILY SSF53254 1 204 2.88E-34 T 14-10-2018 IPR029033 Histidine phosphatase superfamily D172_020385 5c94d5f51183541efed936afc5515fe6 234 Gene3D G3DSA:3.40.50.1240 3 221 3.0E-30 T 14-10-2018 IPR029033 Histidine phosphatase superfamily D172_016165 587b7de5586c60cf93ec7b09a42b655c 264 Gene3D G3DSA:3.10.180.10 7 132 8.6E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_016165 587b7de5586c60cf93ec7b09a42b655c 264 Gene3D G3DSA:3.10.180.10 138 261 1.5E-35 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_016165 587b7de5586c60cf93ec7b09a42b655c 264 SUPERFAMILY SSF54593 12 128 1.61E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_016165 587b7de5586c60cf93ec7b09a42b655c 264 SUPERFAMILY SSF54593 145 258 5.91E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_018365 dcd6905db63be782d9151402caefbcbd 850 SUPERFAMILY SSF48208 491 843 1.17E-58 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 D172_018365 dcd6905db63be782d9151402caefbcbd 850 Gene3D G3DSA:1.50.10.10 489 842 9.3E-120 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 D172_018365 dcd6905db63be782d9151402caefbcbd 850 Pfam PF16153 Domain of unknown function (DUF4861) 50 444 4.6E-90 T 14-10-2018 IPR032342 Protein of unknown function DUF4861 D172_018365 dcd6905db63be782d9151402caefbcbd 850 Pfam PF07470 Glycosyl Hydrolase Family 88 509 843 2.2E-85 T 14-10-2018 IPR010905 Glycosyl hydrolase, family 88 D172_017525 f104b9ee7d23fbe8424b720fa5002f51 154 Gene3D G3DSA:2.60.40.4150 23 152 9.0E-38 T 14-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily D172_017525 f104b9ee7d23fbe8424b720fa5002f51 154 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 16 145 1.7E-37 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN D172_017525 f104b9ee7d23fbe8424b720fa5002f51 154 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 8 146 2.8E-42 T 14-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN D172_005450 f10375c7a395faf42ea2a27d1eced88c 512 PRINTS PR01806 Virulence factor MviN signature 128 152 9.0E-77 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D172_005450 f10375c7a395faf42ea2a27d1eced88c 512 PRINTS PR01806 Virulence factor MviN signature 21 40 9.0E-77 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D172_005450 f10375c7a395faf42ea2a27d1eced88c 512 PRINTS PR01806 Virulence factor MviN signature 407 424 9.0E-77 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D172_005450 f10375c7a395faf42ea2a27d1eced88c 512 PRINTS PR01806 Virulence factor MviN signature 40 56 9.0E-77 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D172_005450 f10375c7a395faf42ea2a27d1eced88c 512 PRINTS PR01806 Virulence factor MviN signature 355 374 9.0E-77 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D172_005450 f10375c7a395faf42ea2a27d1eced88c 512 PRINTS PR01806 Virulence factor MviN signature 152 173 9.0E-77 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D172_005450 f10375c7a395faf42ea2a27d1eced88c 512 PRINTS PR01806 Virulence factor MviN signature 254 280 9.0E-77 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D172_005450 f10375c7a395faf42ea2a27d1eced88c 512 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 1 465 18.636 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D172_005450 f10375c7a395faf42ea2a27d1eced88c 512 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 1 499 1.7E-133 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D172_005450 f10375c7a395faf42ea2a27d1eced88c 512 PIRSF PIRSF002869 1 508 2.4E-150 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D172_005450 f10375c7a395faf42ea2a27d1eced88c 512 Pfam PF03023 MviN-like protein 16 473 3.3E-143 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ D172_015840 d31921431d07a6b4c08b77cd830efe0e 172 Pfam PF01202 Shikimate kinase 13 170 2.3E-55 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 D172_015840 d31921431d07a6b4c08b77cd830efe0e 172 Gene3D G3DSA:3.40.50.300 1 171 6.8E-57 T 14-10-2018 D172_015840 d31921431d07a6b4c08b77cd830efe0e 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 D172_015840 d31921431d07a6b4c08b77cd830efe0e 172 PRINTS PR01100 Shikimate kinase family signature 77 86 5.7E-29 T 14-10-2018 D172_015840 d31921431d07a6b4c08b77cd830efe0e 172 PRINTS PR01100 Shikimate kinase family signature 59 67 5.7E-29 T 14-10-2018 D172_015840 d31921431d07a6b4c08b77cd830efe0e 172 PRINTS PR01100 Shikimate kinase family signature 7 22 5.7E-29 T 14-10-2018 D172_015840 d31921431d07a6b4c08b77cd830efe0e 172 PRINTS PR01100 Shikimate kinase family signature 98 115 5.7E-29 T 14-10-2018 D172_015840 d31921431d07a6b4c08b77cd830efe0e 172 PRINTS PR01100 Shikimate kinase family signature 31 44 5.7E-29 T 14-10-2018 D172_015840 d31921431d07a6b4c08b77cd830efe0e 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.293 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 D172_015840 d31921431d07a6b4c08b77cd830efe0e 172 SUPERFAMILY SSF52540 4 170 8.42E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_005075 c01bf48a2418c546579e96b2105bc30f 65 Pfam PF05532 CsbD-like 4 56 8.2E-21 T 14-10-2018 IPR008462 CsbD-like domain D172_005075 c01bf48a2418c546579e96b2105bc30f 65 PIRSF PIRSF039008 1 65 5.0E-31 T 14-10-2018 IPR026042 Stress response protein YjbJ D172_005075 c01bf48a2418c546579e96b2105bc30f 65 Gene3D G3DSA:1.10.1470.10 1 64 5.4E-31 T 14-10-2018 IPR036629 YjbJ superfamily D172_005075 c01bf48a2418c546579e96b2105bc30f 65 SUPERFAMILY SSF69047 1 64 2.22E-24 T 14-10-2018 IPR036629 YjbJ superfamily D172_009135 3681ef7e89e4890161de4502b7051f94 335 Pfam PF00581 Rhodanese-like domain 127 220 6.6E-8 T 14-10-2018 IPR001763 Rhodanese-like domain D172_009135 3681ef7e89e4890161de4502b7051f94 335 SMART SM00450 123 224 1.2E-20 T 14-10-2018 IPR001763 Rhodanese-like domain D172_009135 3681ef7e89e4890161de4502b7051f94 335 SUPERFAMILY SSF52821 104 251 4.8E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily D172_009135 3681ef7e89e4890161de4502b7051f94 335 Gene3D G3DSA:3.30.70.100 2 106 7.6E-32 T 14-10-2018 D172_009135 3681ef7e89e4890161de4502b7051f94 335 Hamap MF_00469 UPF0176 protein YceA [yceA]. 12 264 45.708 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 D172_009135 3681ef7e89e4890161de4502b7051f94 335 Gene3D G3DSA:3.40.250.10 107 261 1.2E-51 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily D172_004910 2ecc841cc1952b12bb0fa17174110b4c 400 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 399 36.362 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 D172_004910 2ecc841cc1952b12bb0fa17174110b4c 400 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 395 7.0E-175 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 D172_004910 2ecc841cc1952b12bb0fa17174110b4c 400 Pfam PF03116 NQR2, RnfD, RnfE family 43 392 3.5E-106 T 14-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 D172_004910 2ecc841cc1952b12bb0fa17174110b4c 400 PIRSF PIRSF016055 1 400 1.3E-198 T 14-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 D172_010510 45ae339d7006e71c4dc0f98df8ba21dc 417 Pfam PF03781 Sulfatase-modifying factor enzyme 1 154 263 4.3E-7 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 D172_010510 45ae339d7006e71c4dc0f98df8ba21dc 417 SUPERFAMILY SSF56436 130 414 3.3E-22 T 14-10-2018 IPR016187 C-type lectin fold D172_010510 45ae339d7006e71c4dc0f98df8ba21dc 417 Gene3D G3DSA:3.90.1580.10 125 319 1.7E-7 T 14-10-2018 D172_015780 570d8b93b1431713dd767b72be890fc7 455 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 84 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D172_015780 570d8b93b1431713dd767b72be890fc7 455 SUPERFAMILY SSF103473 9 395 4.05E-64 T 14-10-2018 IPR036259 MFS transporter superfamily D172_015780 570d8b93b1431713dd767b72be890fc7 455 Gene3D G3DSA:1.20.1250.20 4 393 1.4E-82 T 14-10-2018 D172_015780 570d8b93b1431713dd767b72be890fc7 455 Pfam PF07690 Major Facilitator Superfamily 18 332 1.5E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_018375 9279ac1d8c31929370eeafdde39df94c 209 Gene3D G3DSA:3.20.20.70 2 209 4.8E-61 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_018375 9279ac1d8c31929370eeafdde39df94c 209 Pfam PF01081 KDPG and KHG aldolase 9 200 7.6E-60 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D172_018375 9279ac1d8c31929370eeafdde39df94c 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 207 5.3E-65 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D172_018375 9279ac1d8c31929370eeafdde39df94c 209 SUPERFAMILY SSF51569 6 206 2.2E-56 T 14-10-2018 D172_015390 69e66503712838ed6f73f5f66ed4d3f3 275 SUPERFAMILY SSF51735 5 240 1.4E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_015390 69e66503712838ed6f73f5f66ed4d3f3 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 203 2.4E-16 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 D172_015390 69e66503712838ed6f73f5f66ed4d3f3 275 Gene3D G3DSA:3.40.50.720 4 269 5.3E-30 T 14-10-2018 D172_012880 8334a482542d5366d4fabca5ffc65e1b 211 Gene3D G3DSA:3.30.70.1070 126 203 8.6E-8 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D172_012880 8334a482542d5366d4fabca5ffc65e1b 211 SUPERFAMILY SSF110997 131 204 6.41E-15 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 D172_012880 8334a482542d5366d4fabca5ffc65e1b 211 Pfam PF05036 Sporulation related domain 133 202 6.2E-13 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 D172_006535 4e5ad9355dcfea1674ab0c15c3d2470b 545 PIRSF PIRSF032067 9 545 7.0E-61 T 14-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 D172_000680 ed11e398573c45c442353891bf82c2aa 510 Gene3D G3DSA:3.40.630.30 2 221 1.6E-44 T 14-10-2018 D172_000680 ed11e398573c45c442353891bf82c2aa 510 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 369 389 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site D172_000680 ed11e398573c45c442353891bf82c2aa 510 Gene3D G3DSA:3.60.110.10 222 508 1.5E-58 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D172_000680 ed11e398573c45c442353891bf82c2aa 510 SUPERFAMILY SSF55729 7 139 4.66E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_000680 ed11e398573c45c442353891bf82c2aa 510 Pfam PF00795 Carbon-nitrogen hydrolase 224 447 7.8E-32 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 D172_000680 ed11e398573c45c442353891bf82c2aa 510 SUPERFAMILY SSF56317 220 485 3.27E-58 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D172_005705 f26b645eda3858bcfce1d454c1cc61c2 211 Pfam PF13460 NAD(P)H-binding 8 189 1.1E-41 T 14-10-2018 IPR016040 NAD(P)-binding domain D172_005705 f26b645eda3858bcfce1d454c1cc61c2 211 Gene3D G3DSA:3.40.50.720 1 211 2.0E-49 T 14-10-2018 D172_005705 f26b645eda3858bcfce1d454c1cc61c2 211 SUPERFAMILY SSF51735 2 203 2.33E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_009100 686140aab905225c8b753ea7f11c0418 557 Pfam PF13537 Glutamine amidotransferase domain 48 166 2.6E-39 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain D172_009100 686140aab905225c8b753ea7f11c0418 557 Gene3D G3DSA:3.60.20.10 2 193 1.1E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_009100 686140aab905225c8b753ea7f11c0418 557 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 7.4E-116 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 D172_009100 686140aab905225c8b753ea7f11c0418 557 Gene3D G3DSA:3.40.50.620 194 514 4.2E-114 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_009100 686140aab905225c8b753ea7f11c0418 557 PIRSF PIRSF001589 363 503 6.9E-30 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 D172_009100 686140aab905225c8b753ea7f11c0418 557 PIRSF PIRSF001589 1 366 4.6E-106 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 D172_009100 686140aab905225c8b753ea7f11c0418 557 SUPERFAMILY SSF52402 211 480 1.07E-75 T 14-10-2018 D172_009100 686140aab905225c8b753ea7f11c0418 557 Pfam PF00733 Asparagine synthase 212 366 6.2E-57 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 D172_009100 686140aab905225c8b753ea7f11c0418 557 SUPERFAMILY SSF56235 1 196 3.35E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_009080 2079aa76efb0d62cc7082e8c30caf14e 308 SUPERFAMILY SSF50891 189 286 1.67E-8 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily D172_009080 2079aa76efb0d62cc7082e8c30caf14e 308 SMART SM00797 23 296 4.0E-92 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B D172_009080 2079aa76efb0d62cc7082e8c30caf14e 308 Gene3D G3DSA:2.40.100.10 170 308 3.2E-40 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily D172_009080 2079aa76efb0d62cc7082e8c30caf14e 308 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 306 2.5E-83 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B D172_009080 2079aa76efb0d62cc7082e8c30caf14e 308 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 24 279 1.8E-78 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B D172_019865 6f57dac8e61a31b78bac02ef330a2335 269 Pfam PF13614 AAA domain 3 165 9.6E-22 T 14-10-2018 IPR025669 AAA domain D172_019865 6f57dac8e61a31b78bac02ef330a2335 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 267 4.8E-114 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 D172_019865 6f57dac8e61a31b78bac02ef330a2335 269 PIRSF PIRSF003092 1 269 1.6E-94 T 14-10-2018 IPR025501 ATP binding protein MinD D172_019865 6f57dac8e61a31b78bac02ef330a2335 269 SUPERFAMILY SSF52540 1 267 9.31E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_019865 6f57dac8e61a31b78bac02ef330a2335 269 Gene3D G3DSA:3.40.50.300 1 259 1.4E-73 T 14-10-2018 D172_019405 a0c3fdaebacc31c4528d6c57c095375a 641 SUPERFAMILY SSF141868 393 636 4.84E-77 T 14-10-2018 IPR035919 EAL domain superfamily D172_019405 a0c3fdaebacc31c4528d6c57c095375a 641 SMART SM00052 387 629 5.2E-83 T 14-10-2018 IPR001633 EAL domain D172_019405 a0c3fdaebacc31c4528d6c57c095375a 641 SMART SM00267 208 377 3.9E-45 T 14-10-2018 IPR000160 GGDEF domain D172_019405 a0c3fdaebacc31c4528d6c57c095375a 641 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 217 376 2.4E-34 T 14-10-2018 IPR000160 GGDEF domain D172_019405 a0c3fdaebacc31c4528d6c57c095375a 641 Pfam PF00563 EAL domain 394 624 1.1E-62 T 14-10-2018 IPR001633 EAL domain D172_019405 a0c3fdaebacc31c4528d6c57c095375a 641 Pfam PF00990 Diguanylate cyclase, GGDEF domain 220 371 1.4E-39 T 14-10-2018 IPR000160 GGDEF domain D172_019405 a0c3fdaebacc31c4528d6c57c095375a 641 SUPERFAMILY SSF55073 224 379 6.15E-42 T 14-10-2018 IPR029787 Nucleotide cyclase D172_019405 a0c3fdaebacc31c4528d6c57c095375a 641 Gene3D G3DSA:3.20.20.450 389 640 6.2E-81 T 14-10-2018 IPR035919 EAL domain superfamily D172_019405 a0c3fdaebacc31c4528d6c57c095375a 641 Gene3D G3DSA:3.30.70.270 213 380 1.3E-45 T 14-10-2018 D172_008915 c2a2b6995c7948c5e9b69e449862e661 325 PIRSF PIRSF034367 1 325 4.0E-185 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 D172_008915 c2a2b6995c7948c5e9b69e449862e661 325 Pfam PF08908 Domain of unknown function (DUF1852) 1 320 1.4E-177 T 14-10-2018 IPR015004 Protein of unknown function DUF1852 D172_000050 b5567668f73c9ee855e645c39fb61011 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 3.5E-57 T 14-10-2018 IPR007456 Smg D172_000050 b5567668f73c9ee855e645c39fb61011 157 Hamap MF_00598 Protein Smg [smg]. 1 157 30.189 T 14-10-2018 IPR007456 Smg D172_010450 be3e2c36f4cfb911f76eff136703f3e1 499 SUPERFAMILY SSF117074 63 99 8.63E-5 T 14-10-2018 D172_002500 d6ab4104eb57208d25abc7ca4d9c4534 433 Pfam PF01204 Trehalase 112 391 1.3E-12 T 14-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 D172_002500 d6ab4104eb57208d25abc7ca4d9c4534 433 Gene3D G3DSA:1.50.10.10 15 431 5.3E-111 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 D172_002500 d6ab4104eb57208d25abc7ca4d9c4534 433 SUPERFAMILY SSF48208 20 431 1.91E-68 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 D172_002315 2a99e130927c50dd340a4799cc3fe52e 409 Gene3D G3DSA:1.20.81.30 262 372 9.5E-29 T 14-10-2018 D172_002315 2a99e130927c50dd340a4799cc3fe52e 409 Gene3D G3DSA:1.20.81.30 60 177 9.3E-29 T 14-10-2018 D172_002315 2a99e130927c50dd340a4799cc3fe52e 409 Pfam PF00482 Type II secretion system (T2SS), protein F 280 401 1.3E-30 T 14-10-2018 IPR018076 Type II secretion system F domain D172_002315 2a99e130927c50dd340a4799cc3fe52e 409 Pfam PF00482 Type II secretion system (T2SS), protein F 76 198 1.1E-28 T 14-10-2018 IPR018076 Type II secretion system F domain D172_002315 2a99e130927c50dd340a4799cc3fe52e 409 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 170 198 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 D172_002315 2a99e130927c50dd340a4799cc3fe52e 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 170 198 1.1E-18 T 14-10-2018 IPR003004 GspF/PilC family D172_002315 2a99e130927c50dd340a4799cc3fe52e 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 374 388 1.1E-18 T 14-10-2018 IPR003004 GspF/PilC family D172_002315 2a99e130927c50dd340a4799cc3fe52e 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 390 409 1.1E-18 T 14-10-2018 IPR003004 GspF/PilC family D172_002315 2a99e130927c50dd340a4799cc3fe52e 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 71 83 1.1E-18 T 14-10-2018 IPR003004 GspF/PilC family D172_016265 b610c03d8b709a58dbec051e41cb94e6 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 D172_016265 b610c03d8b709a58dbec051e41cb94e6 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.9E-55 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 D172_016265 b610c03d8b709a58dbec051e41cb94e6 122 SUPERFAMILY SSF50193 1 122 3.4E-52 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 D172_016265 b610c03d8b709a58dbec051e41cb94e6 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.5E-58 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 D172_016265 b610c03d8b709a58dbec051e41cb94e6 122 SMART SM01374 1 122 1.6E-86 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 D172_016265 b610c03d8b709a58dbec051e41cb94e6 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.339 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 D172_016265 b610c03d8b709a58dbec051e41cb94e6 122 Gene3D G3DSA:2.40.150.20 1 122 2.8E-54 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 D172_015920 f1a45b94bc01f8a8e30bed3ef19f8ece 124 Pfam PF06155 Protein of unknown function (DUF971) 8 90 7.3E-24 T 14-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 D172_015920 f1a45b94bc01f8a8e30bed3ef19f8ece 124 Gene3D G3DSA:3.30.2020.30 1 96 1.6E-24 T 14-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 D172_013535 f5db3e0faec2083355ed0f6f53afe095 226 Pfam PF13861 FlgD Tudor-like domain 90 222 1.2E-7 T 14-10-2018 IPR025963 FlgD Tudor-like domain D172_013535 f5db3e0faec2083355ed0f6f53afe095 226 Pfam PF13860 FlgD Ig-like domain 106 183 1.4E-22 T 14-10-2018 IPR025965 FlgD Ig-like domain D172_013535 f5db3e0faec2083355ed0f6f53afe095 226 Gene3D G3DSA:2.30.30.910 91 217 2.9E-34 T 14-10-2018 D172_013535 f5db3e0faec2083355ed0f6f53afe095 226 Gene3D G3DSA:2.60.40.4070 106 192 2.9E-34 T 14-10-2018 D172_013535 f5db3e0faec2083355ed0f6f53afe095 226 Pfam PF03963 Flagellar hook capping protein - N-terminal region 18 81 7.1E-19 T 14-10-2018 IPR005648 Flagellar hook capping protein D172_008845 aadd1c09ae29ff5c7cbf4dfecf630864 171 SUPERFAMILY SSF54637 2 168 1.31E-57 T 14-10-2018 IPR029069 HotDog domain superfamily D172_008845 aadd1c09ae29ff5c7cbf4dfecf630864 171 Gene3D G3DSA:3.10.129.10 1 171 3.7E-65 T 14-10-2018 D172_008845 aadd1c09ae29ff5c7cbf4dfecf630864 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 171 9.8E-89 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D172_008845 aadd1c09ae29ff5c7cbf4dfecf630864 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 50.66 T 14-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D172_008845 aadd1c09ae29ff5c7cbf4dfecf630864 171 Pfam PF07977 FabA-like domain 28 158 2.7E-51 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D172_013045 eed468f32cb936b1ff24a7b52e1d02c4 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 5.4E-58 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 D172_013045 eed468f32cb936b1ff24a7b52e1d02c4 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.384 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 D172_013045 eed468f32cb936b1ff24a7b52e1d02c4 209 SUPERFAMILY SSF53335 30 208 4.65E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_013045 eed468f32cb936b1ff24a7b52e1d02c4 209 PIRSF PIRSF005461 1 209 3.1E-81 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 D172_013045 eed468f32cb936b1ff24a7b52e1d02c4 209 Gene3D G3DSA:3.40.50.150 30 208 1.6E-61 T 14-10-2018 D172_004705 e6bbcc3e1f5614451d6a7a32f26eb1fb 333 SUPERFAMILY SSF55166 183 328 2.63E-15 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 D172_004705 e6bbcc3e1f5614451d6a7a32f26eb1fb 333 Gene3D G3DSA:3.30.1380.10 184 298 1.4E-10 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 D172_004705 e6bbcc3e1f5614451d6a7a32f26eb1fb 333 Pfam PF08291 Peptidase M15 183 269 6.0E-9 T 14-10-2018 IPR013230 Peptidase M15A, C-terminal KEGG: 00550+3.4.17.14|MetaCyc: PWY-6470 D172_006510 e423e30af7d6c1f01c176dd9e451cfa4 460 Pfam PF13746 4Fe-4S dicluster domain 208 314 5.3E-43 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D172_006510 e423e30af7d6c1f01c176dd9e451cfa4 460 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 261 272 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D172_006510 e423e30af7d6c1f01c176dd9e451cfa4 460 SUPERFAMILY SSF54862 94 333 5.3E-27 T 14-10-2018 D172_006510 e423e30af7d6c1f01c176dd9e451cfa4 460 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 344 458 1.4E-27 T 14-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain D172_006510 e423e30af7d6c1f01c176dd9e451cfa4 460 Gene3D G3DSA:2.60.40.10 345 460 5.7E-34 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_006510 e423e30af7d6c1f01c176dd9e451cfa4 460 Gene3D G3DSA:3.30.70.3270 211 284 2.2E-5 T 14-10-2018 D172_006510 e423e30af7d6c1f01c176dd9e451cfa4 460 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 30 459 1.1E-164 T 14-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 D172_006510 e423e30af7d6c1f01c176dd9e451cfa4 460 Pfam PF12801 4Fe-4S binding domain 83 127 1.0E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D172_016400 a6c9d3b43e66c033f5c7cc4695c3d7e5 290 SMART SM00563 83 225 1.3E-19 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D172_016400 a6c9d3b43e66c033f5c7cc4695c3d7e5 290 Pfam PF01553 Acyltransferase 69 215 5.8E-17 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D172_016400 a6c9d3b43e66c033f5c7cc4695c3d7e5 290 SUPERFAMILY SSF69593 13 278 1.28E-34 T 14-10-2018 D172_011910 51c194d42bd7ba95b9766189e29de90e 275 Pfam PF13369 Transglutaminase-like superfamily 64 155 1.3E-5 T 14-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 D172_011910 51c194d42bd7ba95b9766189e29de90e 275 Pfam PF13371 Tetratricopeptide repeat 197 264 3.7E-19 T 14-10-2018 D172_017740 af777ec949de5441765ce2f982d1e339 229 SUPERFAMILY SSF46894 155 219 2.52E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_017740 af777ec949de5441765ce2f982d1e339 229 Gene3D G3DSA:1.10.10.10 140 223 1.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_017740 af777ec949de5441765ce2f982d1e339 229 ProSitePatterns PS00622 LuxR-type HTH domain signature. 177 204 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_017740 af777ec949de5441765ce2f982d1e339 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 162 217 3.3E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_017740 af777ec949de5441765ce2f982d1e339 229 SMART SM00421 160 217 8.1E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_017740 af777ec949de5441765ce2f982d1e339 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 177 7.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_017740 af777ec949de5441765ce2f982d1e339 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 193 7.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_017740 af777ec949de5441765ce2f982d1e339 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 205 7.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 D172_017740 af777ec949de5441765ce2f982d1e339 229 Gene3D G3DSA:3.40.50.2300 10 139 4.4E-20 T 14-10-2018 D172_001680 921ca473edfaf44db7a4afdde2114680 158 Pfam PF04186 FxsA cytoplasmic membrane protein 8 113 2.1E-35 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 D172_004450 362d024bd92cd566b4cc514aa0729c38 155 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 13 146 9.6E-33 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 D172_004450 362d024bd92cd566b4cc514aa0729c38 155 SUPERFAMILY SSF55729 4 149 3.27E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_004450 362d024bd92cd566b4cc514aa0729c38 155 Gene3D G3DSA:3.40.630.30 4 152 6.1E-39 T 14-10-2018 D172_004450 362d024bd92cd566b4cc514aa0729c38 155 Pfam PF00583 Acetyltransferase (GNAT) family 42 120 2.6E-15 T 14-10-2018 IPR000182 GNAT domain D172_007805 9a0af4ad19f222f4c479bb3f9ee262ac 350 Pfam PF11279 Protein of unknown function (DUF3080) 40 349 3.2E-71 T 14-10-2018 IPR021431 Protein of unknown function DUF3080 D172_006750 07efbf97d66bd308978a1702b4e0efc9 287 Gene3D G3DSA:3.40.50.1820 3 287 2.1E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_006750 07efbf97d66bd308978a1702b4e0efc9 287 SUPERFAMILY SSF53474 7 285 1.21E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_006750 07efbf97d66bd308978a1702b4e0efc9 287 Pfam PF00561 alpha/beta hydrolase fold 32 275 1.7E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_006750 07efbf97d66bd308978a1702b4e0efc9 287 PRINTS PR00412 Epoxide hydrolase signature 102 115 3.1E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D172_006750 07efbf97d66bd308978a1702b4e0efc9 287 PRINTS PR00412 Epoxide hydrolase signature 230 246 3.1E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D172_006750 07efbf97d66bd308978a1702b4e0efc9 287 PRINTS PR00412 Epoxide hydrolase signature 38 56 3.1E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D172_006750 07efbf97d66bd308978a1702b4e0efc9 287 PRINTS PR00412 Epoxide hydrolase signature 263 285 3.1E-7 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 D172_020745 cb2b80ff86d4d98436cf93f81521aabd 253 SUPERFAMILY SSF54427 140 252 2.23E-19 T 14-10-2018 IPR032710 NTF2-like domain superfamily D172_020745 cb2b80ff86d4d98436cf93f81521aabd 253 Pfam PF12680 SnoaL-like domain 145 248 1.1E-6 T 14-10-2018 IPR037401 SnoaL-like domain D172_020745 cb2b80ff86d4d98436cf93f81521aabd 253 Gene3D G3DSA:3.10.450.50 138 252 2.3E-28 T 14-10-2018 D172_017140 2e66410a9123f8a3dee700ba345014bb 389 Gene3D G3DSA:1.20.58.480 144 389 6.2E-106 T 14-10-2018 D172_017140 2e66410a9123f8a3dee700ba345014bb 389 Pfam PF08933 Domain of unknown function (DUF1864) 4 387 2.0E-206 T 14-10-2018 IPR015029 Protein of unknown function DUF1864 D172_017140 2e66410a9123f8a3dee700ba345014bb 389 Gene3D G3DSA:1.20.58.600 1 120 1.9E-55 T 14-10-2018 D172_017140 2e66410a9123f8a3dee700ba345014bb 389 SUPERFAMILY SSF140959 5 387 1.96E-113 T 14-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 D172_009415 2166b9e2fb38e5cb70a4c25870b01712 142 Gene3D G3DSA:1.25.40.10 56 137 3.1E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_009415 2166b9e2fb38e5cb70a4c25870b01712 142 SUPERFAMILY SSF48452 39 130 6.95E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_014180 e1eda1c3bef925d8bd593fde6dcf3160 501 Gene3D G3DSA:2.40.160.130 11 469 1.6E-123 T 14-10-2018 IPR038636 Capsule assembly protein Wzi superfamily D172_014180 e1eda1c3bef925d8bd593fde6dcf3160 501 Pfam PF14052 Capsule assembly protein Wzi 88 467 1.3E-90 T 14-10-2018 IPR026950 Capsule assembly protein Wzi D172_017700 e9ad0592446731ddde49a70e4b0ee2f6 207 SUPERFAMILY SSF52266 4 207 5.5E-24 T 14-10-2018 D172_017700 e9ad0592446731ddde49a70e4b0ee2f6 207 Gene3D G3DSA:3.40.50.1110 1 207 1.4E-59 T 14-10-2018 IPR036514 SGNH hydrolase superfamily D172_017700 e9ad0592446731ddde49a70e4b0ee2f6 207 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 7 183 8.4E-12 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain D172_009780 497f2a90b9012d7b86dd43c34f5de110 338 Gene3D G3DSA:3.40.50.2300 164 293 1.9E-69 T 14-10-2018 D172_009780 497f2a90b9012d7b86dd43c34f5de110 338 SMART SM00354 3 73 2.7E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_009780 497f2a90b9012d7b86dd43c34f5de110 338 Gene3D G3DSA:3.40.50.2300 57 310 1.9E-69 T 14-10-2018 D172_009780 497f2a90b9012d7b86dd43c34f5de110 338 Gene3D G3DSA:1.10.260.40 1 56 3.2E-24 T 14-10-2018 D172_009780 497f2a90b9012d7b86dd43c34f5de110 338 SUPERFAMILY SSF47413 1 61 6.86E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D172_009780 497f2a90b9012d7b86dd43c34f5de110 338 Pfam PF13377 Periplasmic binding protein-like domain 172 333 2.9E-42 T 14-10-2018 D172_009780 497f2a90b9012d7b86dd43c34f5de110 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 5.1E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_009780 497f2a90b9012d7b86dd43c34f5de110 338 SUPERFAMILY SSF53822 64 334 1.47E-74 T 14-10-2018 IPR028082 Periplasmic binding protein-like I D172_011915 31d8e812d2063d300603734e553d3b12 124 Pfam PF04247 Invasion gene expression up-regulator, SirB 3 120 3.7E-30 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB D172_011915 31d8e812d2063d300603734e553d3b12 124 PIRSF PIRSF005610 1 119 2.3E-16 T 14-10-2018 IPR007360 Invasion gene expression up-regulator, SirB D172_017840 9ce3347e7f22843a0f3cb0057d458083 83 Gene3D G3DSA:2.30.30.400 2 77 2.2E-19 T 14-10-2018 IPR038626 Rof-like superfamily D172_017840 9ce3347e7f22843a0f3cb0057d458083 83 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 1.7E-26 T 14-10-2018 IPR009778 Modulator of Rho-dependent transcription termination D172_017840 9ce3347e7f22843a0f3cb0057d458083 83 SUPERFAMILY SSF101744 1 81 1.05E-22 T 14-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 D172_003435 08dc9f0a509fefa07d7fbcb74f412823 183 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 21 173 3.9E-58 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D172_003435 08dc9f0a509fefa07d7fbcb74f412823 183 Pfam PF08282 haloacid dehalogenase-like hydrolase 90 153 5.6E-9 T 14-10-2018 D172_003435 08dc9f0a509fefa07d7fbcb74f412823 183 PIRSF PIRSF006118 8 182 9.6E-68 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 D172_003435 08dc9f0a509fefa07d7fbcb74f412823 183 Gene3D G3DSA:3.40.50.1000 1 182 1.8E-50 T 14-10-2018 IPR023214 HAD superfamily D172_003435 08dc9f0a509fefa07d7fbcb74f412823 183 SUPERFAMILY SSF56784 17 170 1.8E-36 T 14-10-2018 IPR036412 HAD-like superfamily D172_008740 10f1bf8be725c2be62e66d05a2a845d0 241 Gene3D G3DSA:3.30.70.2970 44 152 5.8E-41 T 14-10-2018 D172_008740 10f1bf8be725c2be62e66d05a2a845d0 241 Gene3D G3DSA:3.30.110.170 34 238 5.8E-41 T 14-10-2018 D172_008740 10f1bf8be725c2be62e66d05a2a845d0 241 Pfam PF04402 Protein of unknown function (DUF541) 32 238 7.8E-33 T 14-10-2018 IPR007497 Protein of unknown function DUF541 D172_012375 8cdf45bdd7f64d68a2feb3320f311131 117 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 103 4.9E-24 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like D172_006960 5a8e0caade6136cdf7ebeb32ac734f7e 131 Gene3D G3DSA:3.30.420.270 61 126 1.4E-5 T 14-10-2018 D172_006960 5a8e0caade6136cdf7ebeb32ac734f7e 131 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 129 9.6E-24 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 D172_009445 81bb63d8501121ce2d94ff53deddd18b 369 Gene3D G3DSA:3.40.50.720 171 310 1.7E-105 T 14-10-2018 D172_009445 81bb63d8501121ce2d94ff53deddd18b 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 152 2.0E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 D172_009445 81bb63d8501121ce2d94ff53deddd18b 369 SUPERFAMILY SSF50129 318 367 3.67E-6 T 14-10-2018 IPR011032 GroES-like superfamily D172_009445 81bb63d8501121ce2d94ff53deddd18b 369 SUPERFAMILY SSF51735 155 334 2.43E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_009445 81bb63d8501121ce2d94ff53deddd18b 369 SMART SM00829 11 365 1.5E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D172_009445 81bb63d8501121ce2d94ff53deddd18b 369 Gene3D G3DSA:3.90.180.10 17 361 1.7E-105 T 14-10-2018 D172_009445 81bb63d8501121ce2d94ff53deddd18b 369 SUPERFAMILY SSF50129 3 188 2.28E-44 T 14-10-2018 IPR011032 GroES-like superfamily D172_009445 81bb63d8501121ce2d94ff53deddd18b 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 D172_009445 81bb63d8501121ce2d94ff53deddd18b 369 Pfam PF00107 Zinc-binding dehydrogenase 194 299 4.9E-21 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 D172_006020 45f9f27210a457ac25c5d6ede35918c4 240 Pfam PF01609 Transposase DDE domain 155 226 1.1E-7 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 D172_006020 45f9f27210a457ac25c5d6ede35918c4 240 SUPERFAMILY SSF53098 122 228 1.67E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_015205 c98a0f41831275089a0138b1a590ad3c 166 Pfam PF11736 Protein of unknown function (DUF3299) 33 162 1.4E-43 T 14-10-2018 IPR021727 Protein of unknown function DUF3299 D172_015205 c98a0f41831275089a0138b1a590ad3c 166 Gene3D G3DSA:2.40.50.870 26 166 2.3E-46 T 14-10-2018 D172_002445 356a7da63103e572e5e71c8d79ee916a 397 SUPERFAMILY SSF102645 184 396 1.44E-77 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 D172_002445 356a7da63103e572e5e71c8d79ee916a 397 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 393 8.9E-147 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 D172_002445 356a7da63103e572e5e71c8d79ee916a 397 Gene3D G3DSA:3.40.50.10300 185 397 8.5E-78 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 D172_002445 356a7da63103e572e5e71c8d79ee916a 397 Gene3D G3DSA:3.40.50.1950 1 184 2.9E-59 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 D172_002445 356a7da63103e572e5e71c8d79ee916a 397 Pfam PF02441 Flavoprotein 7 178 3.8E-47 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 D172_002445 356a7da63103e572e5e71c8d79ee916a 397 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 368 9.8E-70 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 D172_002445 356a7da63103e572e5e71c8d79ee916a 397 SUPERFAMILY SSF52507 3 178 1.96E-60 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 D172_003775 83b7a64aaca00c271063e5356758b8e9 199 Gene3D G3DSA:3.30.1360.120 5 188 2.2E-6 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 D172_003775 83b7a64aaca00c271063e5356758b8e9 199 Gene3D G3DSA:3.30.70.1400 28 113 2.2E-6 T 14-10-2018 D172_003775 83b7a64aaca00c271063e5356758b8e9 199 SUPERFAMILY SSF103025 23 195 9.42E-8 T 14-10-2018 D172_019960 3ab7fe99fa87168ec684911538120feb 201 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 121 198 6.5E-21 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 D172_019960 3ab7fe99fa87168ec684911538120feb 201 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 122 197 2.3E-16 T 14-10-2018 IPR006260 TonB/TolA, C-terminal D172_019960 3ab7fe99fa87168ec684911538120feb 201 SUPERFAMILY SSF74653 112 192 3.01E-25 T 14-10-2018 D172_019960 3ab7fe99fa87168ec684911538120feb 201 Gene3D G3DSA:3.30.1150.10 106 200 2.6E-24 T 14-10-2018 D172_019960 3ab7fe99fa87168ec684911538120feb 201 PRINTS PR01374 Gram-negative bacterial tonB protein signature 156 173 6.8E-13 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_019960 3ab7fe99fa87168ec684911538120feb 201 PRINTS PR01374 Gram-negative bacterial tonB protein signature 58 68 6.8E-13 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_019960 3ab7fe99fa87168ec684911538120feb 201 PRINTS PR01374 Gram-negative bacterial tonB protein signature 137 155 6.8E-13 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_019960 3ab7fe99fa87168ec684911538120feb 201 PRINTS PR01374 Gram-negative bacterial tonB protein signature 116 137 6.8E-13 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_005515 298f844d717f4e3d02b6e9c2e1cacfb2 179 Gene3D G3DSA:3.55.40.10 36 177 4.9E-12 T 14-10-2018 D172_005515 298f844d717f4e3d02b6e9c2e1cacfb2 179 SUPERFAMILY SSF54523 15 145 2.04E-11 T 14-10-2018 D172_005515 298f844d717f4e3d02b6e9c2e1cacfb2 179 Pfam PF12019 Type II transport protein GspH 49 165 6.9E-13 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 D172_006075 8f10a452b55f3752459af5e5966e5efe 78 Pfam PF10982 Protein of unknown function (DUF2789) 1 73 1.7E-29 T 14-10-2018 IPR021250 Protein of unknown function DUF2789 D172_006075 8f10a452b55f3752459af5e5966e5efe 78 Gene3D G3DSA:1.10.10.1130 1 78 1.8E-30 T 14-10-2018 D172_007310 0ee4288e7b03c66a58c3a8113eda2631 306 SUPERFAMILY SSF53448 5 230 7.5E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_007310 0ee4288e7b03c66a58c3a8113eda2631 306 Gene3D G3DSA:3.90.550.10 2 261 4.5E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_007310 0ee4288e7b03c66a58c3a8113eda2631 306 Pfam PF00535 Glycosyl transferase family 2 6 150 1.7E-35 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D172_019490 f59edfa9704e3e6f68d64f123ee3b48f 663 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 320 650 2.1E-77 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 D172_019490 f59edfa9704e3e6f68d64f123ee3b48f 663 SUPERFAMILY SSF51445 167 651 4.38E-106 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_019490 f59edfa9704e3e6f68d64f123ee3b48f 663 Gene3D G3DSA:3.20.20.80 164 318 1.2E-15 T 14-10-2018 D172_019490 f59edfa9704e3e6f68d64f123ee3b48f 663 Pfam PF02446 4-alpha-glucanotransferase 173 317 1.2E-19 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 D172_019490 f59edfa9704e3e6f68d64f123ee3b48f 663 Pfam PF02446 4-alpha-glucanotransferase 321 639 7.8E-70 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 D172_019490 f59edfa9704e3e6f68d64f123ee3b48f 663 Gene3D G3DSA:3.20.20.80 319 658 2.6E-73 T 14-10-2018 D172_019690 73b9d02c3c375048c70ae11db1574ce9 125 Pfam PF11399 Protein of unknown function (DUF3192) 21 122 1.0E-36 T 14-10-2018 IPR021534 Protein of unknown function DUF3192 D172_014955 82874eb9a0e2f343765b9d6755484e6d 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.109 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_014955 82874eb9a0e2f343765b9d6755484e6d 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.4E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_014955 82874eb9a0e2f343765b9d6755484e6d 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_014955 82874eb9a0e2f343765b9d6755484e6d 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 4.7E-147 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_014955 82874eb9a0e2f343765b9d6755484e6d 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 D172_014955 82874eb9a0e2f343765b9d6755484e6d 360 Pfam PF00953 Glycosyl transferase family 4 99 283 6.3E-37 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 D172_014020 743cb75e2c8be3cc21f17145a055a61e 266 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.329 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 D172_014020 743cb75e2c8be3cc21f17145a055a61e 266 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 257 8.3E-72 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 D172_014020 743cb75e2c8be3cc21f17145a055a61e 266 Pfam PF02673 Bacitracin resistance protein BacA 7 258 1.5E-81 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 SUPERFAMILY SSF53732 3 651 2.49E-221 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 PRINTS PR00415 Aconitase family signature 274 287 2.6E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 PRINTS PR00415 Aconitase family signature 141 154 2.6E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 PRINTS PR00415 Aconitase family signature 517 530 2.6E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 PRINTS PR00415 Aconitase family signature 165 173 2.6E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 PRINTS PR00415 Aconitase family signature 198 211 2.6E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 PRINTS PR00415 Aconitase family signature 367 381 2.6E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 PRINTS PR00415 Aconitase family signature 212 227 2.6E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 PRINTS PR00415 Aconitase family signature 288 301 2.6E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 PRINTS PR00415 Aconitase family signature 455 466 2.6E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 ProSitePatterns PS01244 Aconitase family signature 2. 517 530 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 Gene3D G3DSA:1.10.1440.20 616 676 7.2E-21 T 14-10-2018 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 SUPERFAMILY SSF52016 655 913 8.83E-86 T 14-10-2018 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 Pfam PF00694 Aconitase C-terminal domain 716 843 2.5E-45 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 913 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 Pfam PF00330 Aconitase family (aconitate hydratase) 64 586 1.4E-178 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 Gene3D G3DSA:3.30.499.20 3 367 2.0E-161 T 14-10-2018 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 Gene3D G3DSA:3.30.499.10 368 614 5.8E-94 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 D172_001120 234c7d11f9a6a747eeb7867e4e195532 914 Gene3D G3DSA:3.20.19.10 678 914 5.5E-102 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 D172_012200 1dfb0a7867689fec1e40aadf3b07ac5b 321 Pfam PF04055 Radical SAM superfamily 91 252 1.3E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D172_012200 1dfb0a7867689fec1e40aadf3b07ac5b 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 29 73 4.2E-7 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D172_012200 1dfb0a7867689fec1e40aadf3b07ac5b 321 SMART SM00729 84 292 2.7E-21 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D172_012200 1dfb0a7867689fec1e40aadf3b07ac5b 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 153.894 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D172_012200 1dfb0a7867689fec1e40aadf3b07ac5b 321 Gene3D G3DSA:3.20.20.70 82 291 3.0E-22 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_012200 1dfb0a7867689fec1e40aadf3b07ac5b 321 SUPERFAMILY SSF102114 52 314 1.57E-64 T 14-10-2018 D172_012200 1dfb0a7867689fec1e40aadf3b07ac5b 321 PIRSF PIRSF005963 2 321 2.8E-130 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D172_012200 1dfb0a7867689fec1e40aadf3b07ac5b 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 320 2.7E-146 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 D172_009040 1eff2f334b65c6a89da4432058ebd740 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 255 7.3E-45 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 D172_009040 1eff2f334b65c6a89da4432058ebd740 256 Gene3D G3DSA:1.10.12.10 199 256 9.7E-25 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal D172_009040 1eff2f334b65c6a89da4432058ebd740 256 Gene3D G3DSA:3.90.226.10 2 195 4.1E-56 T 14-10-2018 D172_009040 1eff2f334b65c6a89da4432058ebd740 256 SUPERFAMILY SSF52096 5 255 5.27E-65 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_018870 75966fb721d5e87c04db4483f2af95c4 426 SUPERFAMILY SSF54631 199 334 6.96E-22 T 14-10-2018 D172_018870 75966fb721d5e87c04db4483f2af95c4 426 SUPERFAMILY SSF56176 343 424 1.06E-20 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D172_018870 75966fb721d5e87c04db4483f2af95c4 426 Pfam PF00571 CBS domain 279 329 1.0E-4 T 14-10-2018 IPR000644 CBS domain D172_018870 75966fb721d5e87c04db4483f2af95c4 426 Pfam PF00571 CBS domain 213 268 0.0057 T 14-10-2018 IPR000644 CBS domain D172_018870 75966fb721d5e87c04db4483f2af95c4 426 Gene3D G3DSA:3.30.465.10 346 424 1.5E-27 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 D172_018870 75966fb721d5e87c04db4483f2af95c4 426 Pfam PF03471 Transporter associated domain 346 423 1.3E-20 T 14-10-2018 IPR005170 Transporter-associated domain D172_018870 75966fb721d5e87c04db4483f2af95c4 426 Gene3D G3DSA:3.10.580.10 192 345 9.6E-30 T 14-10-2018 D172_018870 75966fb721d5e87c04db4483f2af95c4 426 SMART SM01091 345 425 2.1E-24 T 14-10-2018 IPR005170 Transporter-associated domain D172_018870 75966fb721d5e87c04db4483f2af95c4 426 Pfam PF01595 Domain of unknown function DUF21 7 196 4.4E-36 T 14-10-2018 IPR002550 CNNM, transmembrane domain D172_015425 0c2b7dc9f257924055ee862c3f105e97 260 Pfam PF04338 Protein of unknown function, DUF481 33 260 9.9E-61 T 14-10-2018 IPR007433 Protein of unknown function DUF481 D172_002560 e836cd434d18a8e008a0a035ad1c3ea4 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 326 35.086 T 14-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 D172_002560 e836cd434d18a8e008a0a035ad1c3ea4 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 323 1.5E-126 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 D172_002560 e836cd434d18a8e008a0a035ad1c3ea4 330 SUPERFAMILY SSF53659 3 325 1.25E-113 T 14-10-2018 D172_002560 e836cd434d18a8e008a0a035ad1c3ea4 330 Gene3D G3DSA:3.40.718.10 1 328 2.9E-124 T 14-10-2018 D172_002560 e836cd434d18a8e008a0a035ad1c3ea4 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 318 9.1E-108 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 D172_000840 97a070d32443f81e8e53ff673d8aacc3 466 Gene3D G3DSA:3.40.630.10 45 447 9.8E-147 T 14-10-2018 D172_000840 97a070d32443f81e8e53ff673d8aacc3 466 SUPERFAMILY SSF53187 38 455 2.52E-52 T 14-10-2018 D172_000840 97a070d32443f81e8e53ff673d8aacc3 466 Pfam PF04389 Peptidase family M28 258 446 2.4E-26 T 14-10-2018 IPR007484 Peptidase M28 D172_000840 97a070d32443f81e8e53ff673d8aacc3 466 Gene3D G3DSA:3.50.30.30 98 247 9.8E-147 T 14-10-2018 D172_018830 67b9e86433557ec6f2dbdfab9c52b872 202 Pfam PF01613 Flavin reductase like domain 31 164 9.1E-16 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 D172_018830 67b9e86433557ec6f2dbdfab9c52b872 202 Gene3D G3DSA:2.30.110.10 5 202 5.1E-42 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 D172_018830 67b9e86433557ec6f2dbdfab9c52b872 202 SUPERFAMILY SSF50475 18 196 1.47E-29 T 14-10-2018 D172_000115 b2c31021f67ecb98a90835d06c0ea910 440 Gene3D G3DSA:3.90.230.10 159 439 2.5E-75 T 14-10-2018 D172_000115 b2c31021f67ecb98a90835d06c0ea910 440 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 440 60.115 T 14-10-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 D172_000115 b2c31021f67ecb98a90835d06c0ea910 440 Pfam PF00557 Metallopeptidase family M24 166 427 2.8E-42 T 14-10-2018 IPR000994 Peptidase M24 D172_000115 b2c31021f67ecb98a90835d06c0ea910 440 SUPERFAMILY SSF55920 161 435 3.66E-56 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like D172_000115 b2c31021f67ecb98a90835d06c0ea910 440 Gene3D G3DSA:3.40.350.10 1 157 1.8E-63 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal D172_000115 b2c31021f67ecb98a90835d06c0ea910 440 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 332 344 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site D172_014860 4184d8f6ace128143762f80c0556f826 190 SUPERFAMILY SSF52833 36 187 7.7E-42 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_014860 4184d8f6ace128143762f80c0556f826 190 ProSitePatterns PS00460 Glutathione peroxidases active site. 57 72 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 D172_014860 4184d8f6ace128143762f80c0556f826 190 PRINTS PR01011 Glutathione peroxidase family signature 90 106 1.5E-10 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D172_014860 4184d8f6ace128143762f80c0556f826 190 PRINTS PR01011 Glutathione peroxidase family signature 149 158 1.5E-10 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D172_014860 4184d8f6ace128143762f80c0556f826 190 PRINTS PR01011 Glutathione peroxidase family signature 55 72 1.5E-10 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D172_014860 4184d8f6ace128143762f80c0556f826 190 Gene3D G3DSA:3.40.30.10 21 190 1.1E-42 T 14-10-2018 D172_014860 4184d8f6ace128143762f80c0556f826 190 Pfam PF00255 Glutathione peroxidase 46 142 2.5E-27 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D172_014860 4184d8f6ace128143762f80c0556f826 190 PIRSF PIRSF000303 13 190 7.2E-54 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 D172_010530 2f545758ed82ca6fb697fe7b33227654 109 Pfam PF10761 Protein of unknown function (DUF2590) 9 106 2.5E-29 T 14-10-2018 IPR019697 Bacteriophage HP1, Orf28 D172_017770 8109b98e8fe72bae75e91a8c7f5a1377 310 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 8 307 8.1E-154 T 14-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 D172_017770 8109b98e8fe72bae75e91a8c7f5a1377 310 Pfam PF01522 Polysaccharide deacetylase 78 167 1.6E-18 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 D172_017770 8109b98e8fe72bae75e91a8c7f5a1377 310 SUPERFAMILY SSF88713 7 307 2.18E-95 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 D172_017770 8109b98e8fe72bae75e91a8c7f5a1377 310 Gene3D G3DSA:3.20.20.370 2 310 1.3E-107 T 14-10-2018 D172_009625 07511ad8c99d3c5d51fa585b8a774130 317 Gene3D G3DSA:3.40.190.290 118 314 3.2E-60 T 14-10-2018 D172_009625 07511ad8c99d3c5d51fa585b8a774130 317 SUPERFAMILY SSF46785 27 138 7.35E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_009625 07511ad8c99d3c5d51fa585b8a774130 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 37 90 7.1E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_009625 07511ad8c99d3c5d51fa585b8a774130 317 SUPERFAMILY SSF53850 117 315 7.78E-40 T 14-10-2018 D172_009625 07511ad8c99d3c5d51fa585b8a774130 317 Gene3D G3DSA:1.10.10.10 30 116 1.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_009625 07511ad8c99d3c5d51fa585b8a774130 317 Pfam PF03466 LysR substrate binding domain 116 314 2.0E-39 T 14-10-2018 IPR005119 LysR, substrate-binding D172_016505 e246db8e1afcc9dc982b9bf5f09536a7 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 43.063 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 D172_016505 e246db8e1afcc9dc982b9bf5f09536a7 191 Gene3D G3DSA:3.30.300.130 105 191 2.5E-20 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily D172_016505 e246db8e1afcc9dc982b9bf5f09536a7 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 3.3E-95 T 14-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 D172_016505 e246db8e1afcc9dc982b9bf5f09536a7 191 SUPERFAMILY SSF89360 1 97 1.26E-20 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D172_016505 e246db8e1afcc9dc982b9bf5f09536a7 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 2.9E-12 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 D172_016505 e246db8e1afcc9dc982b9bf5f09536a7 191 Pfam PF01106 NifU-like domain 111 177 1.0E-19 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 D172_016505 e246db8e1afcc9dc982b9bf5f09536a7 191 SUPERFAMILY SSF117916 95 184 2.4E-22 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily D172_016505 e246db8e1afcc9dc982b9bf5f09536a7 191 Gene3D G3DSA:2.60.300.12 1 98 5.0E-15 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 D172_016505 e246db8e1afcc9dc982b9bf5f09536a7 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 118 178 1.0E-27 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 D172_000445 633669d5def9130dcc2fd733d97c1ed6 82 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 1.7E-34 T 14-10-2018 IPR021724 Protein of unknown function DUF3297 D172_020175 3eb33c5049f0cf9160c6c57096fe992d 69 Pfam PF09656 Putative transmembrane protein (PGPGW) 4 50 1.2E-6 T 14-10-2018 IPR019099 Uncharacterised protein family PGPGW, transmembrane D172_013130 113da8d484dff40553d70640dec7557c 291 Pfam PF06629 MltA-interacting protein MipA 51 291 8.5E-36 T 14-10-2018 IPR010583 MltA-interacting MipA D172_019565 c8264d7e901375d78fa314959670f493 209 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 11 208 2.7E-61 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 D172_019565 c8264d7e901375d78fa314959670f493 209 Pfam PF03006 Haemolysin-III related 8 201 8.0E-37 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 D172_004865 9e8a32ca77c033d7abb1035952b10755 79 SMART SM00530 17 72 1.4E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D172_004865 9e8a32ca77c033d7abb1035952b10755 79 Gene3D G3DSA:1.10.260.40 2 79 1.0E-27 T 14-10-2018 D172_004865 9e8a32ca77c033d7abb1035952b10755 79 Pfam PF01381 Helix-turn-helix 18 70 1.3E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 D172_004865 9e8a32ca77c033d7abb1035952b10755 79 SUPERFAMILY SSF47413 11 74 3.94E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D172_017040 96ff768723c39c0750cb5890975fca86 200 SUPERFAMILY SSF53474 5 193 1.2E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_017040 96ff768723c39c0750cb5890975fca86 200 Pfam PF07819 PGAP1-like protein 62 120 8.3E-11 T 14-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 D172_010255 bb771ed81c8aced21b9ec97344f4db62 334 SUPERFAMILY SSF47413 1 59 1.02E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 D172_010255 bb771ed81c8aced21b9ec97344f4db62 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_010255 bb771ed81c8aced21b9ec97344f4db62 334 Gene3D G3DSA:3.40.50.2300 62 305 1.4E-72 T 14-10-2018 D172_010255 bb771ed81c8aced21b9ec97344f4db62 334 SUPERFAMILY SSF53822 61 330 4.12E-79 T 14-10-2018 IPR028082 Periplasmic binding protein-like I D172_010255 bb771ed81c8aced21b9ec97344f4db62 334 SMART SM00354 1 71 6.2E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 D172_010255 bb771ed81c8aced21b9ec97344f4db62 334 Gene3D G3DSA:3.40.50.2300 160 289 1.4E-72 T 14-10-2018 D172_010255 bb771ed81c8aced21b9ec97344f4db62 334 Gene3D G3DSA:1.10.260.40 1 57 2.8E-23 T 14-10-2018 D172_010255 bb771ed81c8aced21b9ec97344f4db62 334 Pfam PF13377 Periplasmic binding protein-like domain 171 329 1.3E-30 T 14-10-2018 D172_004890 d4ad2d2002bb920758a10e650189a8a0 202 SUPERFAMILY SSF51197 9 194 3.71E-55 T 14-10-2018 D172_004890 d4ad2d2002bb920758a10e650189a8a0 202 Gene3D G3DSA:2.60.120.590 2 201 2.2E-57 T 14-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily D172_004890 d4ad2d2002bb920758a10e650189a8a0 202 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 15 192 3.7E-28 T 14-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like D172_003960 7d5bc6aaf54a12f319b350ab4b404df4 83 SUPERFAMILY SSF89957 1 77 2.98E-19 T 14-10-2018 IPR029756 MTH1187/YkoF-like D172_003960 7d5bc6aaf54a12f319b350ab4b404df4 83 Gene3D G3DSA:3.30.70.930 2 78 4.1E-13 T 14-10-2018 IPR029756 MTH1187/YkoF-like D172_003960 7d5bc6aaf54a12f319b350ab4b404df4 83 Pfam PF07615 YKOF-related Family 6 58 3.9E-5 T 14-10-2018 IPR011522 Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative D172_018350 ec46ecadcd03d61cfbbcdb6cb52bae89 316 SUPERFAMILY SSF53474 18 311 1.29E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_018350 ec46ecadcd03d61cfbbcdb6cb52bae89 316 Pfam PF07859 alpha/beta hydrolase fold 89 295 6.5E-27 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 D172_018350 ec46ecadcd03d61cfbbcdb6cb52bae89 316 Gene3D G3DSA:3.40.50.1820 30 315 1.3E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_015610 dd9e01faa2a7bcf332bbd1f0a1dd49a1 134 Pfam PF04965 Gene 25-like lysozyme 30 118 3.3E-15 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD D172_015610 dd9e01faa2a7bcf332bbd1f0a1dd49a1 134 SUPERFAMILY SSF160719 28 131 9.94E-24 T 14-10-2018 D172_015610 dd9e01faa2a7bcf332bbd1f0a1dd49a1 134 Gene3D G3DSA:3.10.450.40 2 133 2.5E-36 T 14-10-2018 D172_015790 cc6e7106953e3e52d934b1cb7d3a62d8 714 SUPERFAMILY SSF46894 3 97 8.5E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_015790 cc6e7106953e3e52d934b1cb7d3a62d8 714 SMART SM00862 23 96 7.1E-12 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_015790 cc6e7106953e3e52d934b1cb7d3a62d8 714 Gene3D G3DSA:2.120.10.30 288 450 2.9E-5 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_015790 cc6e7106953e3e52d934b1cb7d3a62d8 714 SUPERFAMILY SSF82171 168 503 2.2E-13 T 14-10-2018 D172_015790 cc6e7106953e3e52d934b1cb7d3a62d8 714 Pfam PF00486 Transcriptional regulatory protein, C terminal 26 96 3.2E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_015790 cc6e7106953e3e52d934b1cb7d3a62d8 714 SUPERFAMILY SSF101908 364 703 7.45E-9 T 14-10-2018 D172_015790 cc6e7106953e3e52d934b1cb7d3a62d8 714 Gene3D G3DSA:1.10.10.10 1 113 9.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_009980 0f9caf8f279534384bb8bb6ef5020821 257 Pfam PF09836 Putative DNA-binding domain 7 98 1.8E-14 T 14-10-2018 IPR018640 Putative DNA-binding domain, bacteria D172_010650 722b07ebaf5a1b66b5e42d512f3a5504 863 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 114 394 4.5E-68 T 14-10-2018 IPR008766 Replication gene A protein GO:0006260 D172_010650 722b07ebaf5a1b66b5e42d512f3a5504 863 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 477 525 4.5E-8 T 14-10-2018 IPR008766 Replication gene A protein GO:0006260 D172_019555 e5a7cd3cba73397eb9036d2a78bfbb19 103 SUPERFAMILY SSF46767 10 89 4.58E-22 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 D172_019555 e5a7cd3cba73397eb9036d2a78bfbb19 103 Gene3D G3DSA:1.10.10.10 6 103 1.5E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_019555 e5a7cd3cba73397eb9036d2a78bfbb19 103 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 11 88 4.1E-21 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 D172_011390 d2da6218d5df3118bde7a7f2c44972ce 130 Gene3D G3DSA:3.40.50.10140 3 129 1.3E-11 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily D172_011390 d2da6218d5df3118bde7a7f2c44972ce 130 Pfam PF13676 TIR domain 5 100 2.7E-10 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 D172_011390 d2da6218d5df3118bde7a7f2c44972ce 130 SUPERFAMILY SSF52200 4 102 3.66E-10 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily D172_020565 2de82269b3fcf06d6e43a15e50ac3511 556 Gene3D G3DSA:3.30.300.30 423 533 6.4E-25 T 14-10-2018 D172_020565 2de82269b3fcf06d6e43a15e50ac3511 556 Pfam PF00501 AMP-binding enzyme 19 428 9.3E-90 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_020565 2de82269b3fcf06d6e43a15e50ac3511 556 Pfam PF13193 AMP-binding enzyme C-terminal domain 436 515 2.2E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain D172_020565 2de82269b3fcf06d6e43a15e50ac3511 556 SUPERFAMILY SSF56801 10 525 2.22E-130 T 14-10-2018 D172_020565 2de82269b3fcf06d6e43a15e50ac3511 556 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_020565 2de82269b3fcf06d6e43a15e50ac3511 556 Gene3D G3DSA:3.40.50.12780 9 422 2.8E-119 T 14-10-2018 D172_020565 2de82269b3fcf06d6e43a15e50ac3511 556 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 40 452 2.1E-116 T 14-10-2018 IPR010071 Amino acid adenylation domain D172_018965 35d5274cc1cb648d36d040a719c58a81 246 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 101 116 1.9E-8 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D172_018965 35d5274cc1cb648d36d040a719c58a81 246 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 1.9E-8 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D172_018965 35d5274cc1cb648d36d040a719c58a81 246 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 1.9E-8 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D172_018965 35d5274cc1cb648d36d040a719c58a81 246 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 173 1.5E-31 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D172_018965 35d5274cc1cb648d36d040a719c58a81 246 Gene3D G3DSA:2.40.100.10 17 186 6.1E-39 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily D172_018965 35d5274cc1cb648d36d040a719c58a81 246 SUPERFAMILY SSF50891 19 173 4.38E-33 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily D172_013380 654f06e10ed1af04e66abf47a8ac8871 246 Pfam PF00813 FliP family 46 238 3.2E-75 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D172_013380 654f06e10ed1af04e66abf47a8ac8871 246 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 219 231 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D172_013380 654f06e10ed1af04e66abf47a8ac8871 246 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 46 242 2.2E-79 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 D172_013380 654f06e10ed1af04e66abf47a8ac8871 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 44 63 3.0E-64 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D172_013380 654f06e10ed1af04e66abf47a8ac8871 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 83 102 3.0E-64 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D172_013380 654f06e10ed1af04e66abf47a8ac8871 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 192 213 3.0E-64 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D172_013380 654f06e10ed1af04e66abf47a8ac8871 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 241 3.0E-64 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D172_013380 654f06e10ed1af04e66abf47a8ac8871 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 171 191 3.0E-64 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D172_013380 654f06e10ed1af04e66abf47a8ac8871 246 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 63 83 3.0E-64 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 D172_013380 654f06e10ed1af04e66abf47a8ac8871 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 42 51 4.3E-18 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 D172_013380 654f06e10ed1af04e66abf47a8ac8871 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 114 128 4.3E-18 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 D172_013380 654f06e10ed1af04e66abf47a8ac8871 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 102 114 4.3E-18 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 D172_013380 654f06e10ed1af04e66abf47a8ac8871 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 232 242 4.3E-18 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 D172_013380 654f06e10ed1af04e66abf47a8ac8871 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 142 154 4.3E-18 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 D172_013380 654f06e10ed1af04e66abf47a8ac8871 246 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 164 176 4.3E-18 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 D172_000540 cffd2c4d67844b39911143e52386482f 177 Pfam PF03703 Bacterial PH domain 85 150 1.3E-12 T 14-10-2018 IPR005182 Domain of unknown function DUF304 D172_009015 691c20247f2f8386811dee196cc33d61 496 Gene3D G3DSA:3.40.309.10 249 449 3.9E-139 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D172_009015 691c20247f2f8386811dee196cc33d61 496 Pfam PF00171 Aldehyde dehydrogenase family 13 476 6.0E-136 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D172_009015 691c20247f2f8386811dee196cc33d61 496 Gene3D G3DSA:3.40.605.10 23 457 3.9E-139 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D172_009015 691c20247f2f8386811dee196cc33d61 496 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 480 7.3E-236 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 D172_009015 691c20247f2f8386811dee196cc33d61 496 SUPERFAMILY SSF53720 2 482 1.03E-142 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D172_007480 2531bf9916662a9003f62d05d172b752 324 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 63 310 5.2E-40 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region D172_007480 2531bf9916662a9003f62d05d172b752 324 Gene3D G3DSA:2.120.10.30 37 324 1.0E-69 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_007480 2531bf9916662a9003f62d05d172b752 324 SUPERFAMILY SSF63829 47 322 1.01E-47 T 14-10-2018 D172_007480 2531bf9916662a9003f62d05d172b752 324 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 250 267 8.2E-11 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) D172_007480 2531bf9916662a9003f62d05d172b752 324 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 62 79 8.2E-11 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) D172_007480 2531bf9916662a9003f62d05d172b752 324 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 291 309 8.2E-11 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) D172_001390 5428388638937ac287686dfa612d8e4c 337 Gene3D G3DSA:3.90.25.10 193 328 7.7E-137 T 14-10-2018 D172_001390 5428388638937ac287686dfa612d8e4c 337 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 333 1.0E-130 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 D172_001390 5428388638937ac287686dfa612d8e4c 337 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 9.0E-5 T 14-10-2018 D172_001390 5428388638937ac287686dfa612d8e4c 337 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 9.0E-5 T 14-10-2018 D172_001390 5428388638937ac287686dfa612d8e4c 337 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 9.0E-5 T 14-10-2018 D172_001390 5428388638937ac287686dfa612d8e4c 337 Gene3D G3DSA:3.40.50.720 3 273 7.7E-137 T 14-10-2018 D172_001390 5428388638937ac287686dfa612d8e4c 337 SUPERFAMILY SSF51735 1 333 1.01E-89 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_001390 5428388638937ac287686dfa612d8e4c 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 4.5E-55 T 14-10-2018 IPR016040 NAD(P)-binding domain D172_008705 654b21b8c85ebb2033e91b2299454c22 160 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 31.551 T 14-10-2018 IPR033747 Class I PurE D172_008705 654b21b8c85ebb2033e91b2299454c22 160 SMART SM01001 1 152 5.6E-101 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 D172_008705 654b21b8c85ebb2033e91b2299454c22 160 Gene3D G3DSA:3.40.50.7700 1 160 8.4E-71 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 D172_008705 654b21b8c85ebb2033e91b2299454c22 160 PIRSF PIRSF001338 1 159 6.2E-66 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 D172_008705 654b21b8c85ebb2033e91b2299454c22 160 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 2.9E-65 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 D172_008705 654b21b8c85ebb2033e91b2299454c22 160 Pfam PF00731 AIR carboxylase 3 150 9.0E-64 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 D172_008705 654b21b8c85ebb2033e91b2299454c22 160 SUPERFAMILY SSF52255 2 157 5.1E-65 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 D172_006550 8f8b76daae1a8055148296b17abc7644 278 Pfam PF08376 Nitrate and nitrite sensing 49 273 1.1E-6 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein D172_020645 91ea3d8c8667a30d83d6b0dc74a5f2f0 489 Pfam PF00501 AMP-binding enzyme 26 375 3.7E-44 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 D172_020645 91ea3d8c8667a30d83d6b0dc74a5f2f0 489 Gene3D G3DSA:3.40.50.12780 8 368 1.1E-53 T 14-10-2018 D172_020645 91ea3d8c8667a30d83d6b0dc74a5f2f0 489 SUPERFAMILY SSF56801 19 483 4.97E-67 T 14-10-2018 D172_020645 91ea3d8c8667a30d83d6b0dc74a5f2f0 489 ProSitePatterns PS00455 Putative AMP-binding domain signature. 140 151 - T 14-10-2018 IPR020845 AMP-binding, conserved site D172_000800 bf59282456b35ef5c3ec57abace4d058 333 SUPERFAMILY SSF51556 4 323 8.51E-71 T 14-10-2018 IPR032466 Metal-dependent hydrolase D172_000800 bf59282456b35ef5c3ec57abace4d058 333 Gene3D G3DSA:3.20.20.140 1 333 4.1E-92 T 14-10-2018 D172_000800 bf59282456b35ef5c3ec57abace4d058 333 Pfam PF00962 Adenosine/AMP deaminase 6 326 6.0E-83 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 D172_000800 bf59282456b35ef5c3ec57abace4d058 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 328 2.1E-104 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 D172_000800 bf59282456b35ef5c3ec57abace4d058 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.235 T 14-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 D172_009880 02d2eec308e5a3c2f3da18b9840f2d48 444 Pfam PF00375 Sodium:dicarboxylate symporter family 9 416 2.0E-129 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 D172_009880 02d2eec308e5a3c2f3da18b9840f2d48 444 Gene3D G3DSA:1.10.3860.10 1 435 3.9E-138 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D172_009880 02d2eec308e5a3c2f3da18b9840f2d48 444 PRINTS PR00173 Glutamate-aspartate symporter signature 207 226 5.2E-43 T 14-10-2018 D172_009880 02d2eec308e5a3c2f3da18b9840f2d48 444 PRINTS PR00173 Glutamate-aspartate symporter signature 242 261 5.2E-43 T 14-10-2018 D172_009880 02d2eec308e5a3c2f3da18b9840f2d48 444 PRINTS PR00173 Glutamate-aspartate symporter signature 97 122 5.2E-43 T 14-10-2018 D172_009880 02d2eec308e5a3c2f3da18b9840f2d48 444 PRINTS PR00173 Glutamate-aspartate symporter signature 309 335 5.2E-43 T 14-10-2018 D172_009880 02d2eec308e5a3c2f3da18b9840f2d48 444 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 5.2E-43 T 14-10-2018 D172_009880 02d2eec308e5a3c2f3da18b9840f2d48 444 PRINTS PR00173 Glutamate-aspartate symporter signature 344 363 5.2E-43 T 14-10-2018 D172_009880 02d2eec308e5a3c2f3da18b9840f2d48 444 PRINTS PR00173 Glutamate-aspartate symporter signature 371 391 5.2E-43 T 14-10-2018 D172_009880 02d2eec308e5a3c2f3da18b9840f2d48 444 SUPERFAMILY SSF118215 9 418 2.09E-120 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 D172_020240 330fdffca0d1662a62f4d095201d3bf1 416 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 339 6.1E-53 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 D172_020240 330fdffca0d1662a62f4d095201d3bf1 416 SUPERFAMILY SSF51395 3 340 2.49E-92 T 14-10-2018 D172_020240 330fdffca0d1662a62f4d095201d3bf1 416 Gene3D G3DSA:3.20.20.70 2 352 8.8E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_018160 3d7a80a0f8ae41cc4a47e7edbe3e3a14 252 Gene3D G3DSA:3.40.50.720 1 251 1.0E-71 T 14-10-2018 D172_018160 3d7a80a0f8ae41cc4a47e7edbe3e3a14 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 2.8E-53 T 14-10-2018 D172_018160 3d7a80a0f8ae41cc4a47e7edbe3e3a14 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 2.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018160 3d7a80a0f8ae41cc4a47e7edbe3e3a14 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 2.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018160 3d7a80a0f8ae41cc4a47e7edbe3e3a14 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018160 3d7a80a0f8ae41cc4a47e7edbe3e3a14 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018160 3d7a80a0f8ae41cc4a47e7edbe3e3a14 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018160 3d7a80a0f8ae41cc4a47e7edbe3e3a14 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.0E-29 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018160 3d7a80a0f8ae41cc4a47e7edbe3e3a14 252 SUPERFAMILY SSF51735 3 252 1.23E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_018160 3d7a80a0f8ae41cc4a47e7edbe3e3a14 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 3.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018160 3d7a80a0f8ae41cc4a47e7edbe3e3a14 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 3.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018160 3d7a80a0f8ae41cc4a47e7edbe3e3a14 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 3.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009650 eb90a84d924992d72d29594cee263c73 138 PRINTS PR01837 MgtC/SapB protein signature 20 39 7.0E-22 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 D172_009650 eb90a84d924992d72d29594cee263c73 138 PRINTS PR01837 MgtC/SapB protein signature 93 117 7.0E-22 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 D172_009650 eb90a84d924992d72d29594cee263c73 138 PRINTS PR01837 MgtC/SapB protein signature 66 88 7.0E-22 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 D172_009650 eb90a84d924992d72d29594cee263c73 138 PRINTS PR01837 MgtC/SapB protein signature 39 57 7.0E-22 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 D172_009650 eb90a84d924992d72d29594cee263c73 138 Pfam PF02308 MgtC family 17 137 3.3E-27 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 D172_020585 b0ec4c667e110557419457f0ae94cb60 321 Gene3D G3DSA:3.40.50.1980 40 163 1.4E-37 T 14-10-2018 D172_020585 b0ec4c667e110557419457f0ae94cb60 321 Gene3D G3DSA:3.40.50.1980 164 304 1.6E-31 T 14-10-2018 D172_020585 b0ec4c667e110557419457f0ae94cb60 321 SUPERFAMILY SSF53807 44 295 3.53E-51 T 14-10-2018 D172_020585 b0ec4c667e110557419457f0ae94cb60 321 Pfam PF01497 Periplasmic binding protein 47 270 1.0E-24 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain D172_008760 de2e84862198a87e443c20194ec49b07 190 PIRSF PIRSF020736 2 190 1.1E-43 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 D172_008760 de2e84862198a87e443c20194ec49b07 190 SUPERFAMILY SSF47240 2 190 1.38E-62 T 14-10-2018 IPR009078 Ferritin-like superfamily D172_008760 de2e84862198a87e443c20194ec49b07 190 Gene3D G3DSA:1.20.1260.10 1 190 4.1E-59 T 14-10-2018 IPR012347 Ferritin-like D172_008760 de2e84862198a87e443c20194ec49b07 190 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 44 183 3.2E-29 T 14-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 D172_017970 076152f0fc894f48bf947b5bda88059c 224 Gene3D G3DSA:3.40.50.1000 8 193 6.5E-53 T 14-10-2018 IPR023214 HAD superfamily D172_017970 076152f0fc894f48bf947b5bda88059c 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 81 175 1.8E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_017970 076152f0fc894f48bf947b5bda88059c 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 44 184 1.2E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_017970 076152f0fc894f48bf947b5bda88059c 224 SUPERFAMILY SSF56784 5 209 4.36E-46 T 14-10-2018 IPR036412 HAD-like superfamily D172_017970 076152f0fc894f48bf947b5bda88059c 224 Gene3D G3DSA:1.10.150.240 20 86 6.5E-53 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D172_017970 076152f0fc894f48bf947b5bda88059c 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 2.6E-23 T 14-10-2018 D172_013165 47fd947cc7d452ba763d66b230d810d4 107 Pfam PF03658 RnfH family Ubiquitin 2 84 3.1E-32 T 14-10-2018 IPR005346 RnfH protein D172_013165 47fd947cc7d452ba763d66b230d810d4 107 Gene3D G3DSA:3.10.20.280 1 86 3.2E-31 T 14-10-2018 IPR037021 RnfH superfamily D172_013165 47fd947cc7d452ba763d66b230d810d4 107 SUPERFAMILY SSF54285 1 76 5.1E-24 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp D172_013165 47fd947cc7d452ba763d66b230d810d4 107 Hamap MF_00460 Protein RnfH [rnfH]. 2 92 24.898 T 14-10-2018 IPR005346 RnfH protein D172_002180 4f4bc0f808ecc7a4f7249763682c9879 71 Gene3D G3DSA:1.20.5.1150 16 54 3.9E-22 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002180 4f4bc0f808ecc7a4f7249763682c9879 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 23.25 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002180 4f4bc0f808ecc7a4f7249763682c9879 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 6.5E-25 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002180 4f4bc0f808ecc7a4f7249763682c9879 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 39 2.0E-7 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002180 4f4bc0f808ecc7a4f7249763682c9879 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.2E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002180 4f4bc0f808ecc7a4f7249763682c9879 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.2E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002180 4f4bc0f808ecc7a4f7249763682c9879 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.2E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002180 4f4bc0f808ecc7a4f7249763682c9879 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.2E-16 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002180 4f4bc0f808ecc7a4f7249763682c9879 71 Pfam PF01165 Ribosomal protein S21 4 56 5.0E-23 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_002180 4f4bc0f808ecc7a4f7249763682c9879 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_015440 54c38c8eeb2db46e5320230c2e971303 441 SUPERFAMILY SSF56935 154 441 1.83E-5 T 14-10-2018 D172_015440 54c38c8eeb2db46e5320230c2e971303 441 Pfam PF11059 Protein of unknown function (DUF2860) 319 439 9.8E-7 T 14-10-2018 IPR016896 Protein of unknown function DUF2860 D172_015440 54c38c8eeb2db46e5320230c2e971303 441 SUPERFAMILY SSF48452 63 116 2.1E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_000775 d8d943e31a40e7fe60557da73794280c 325 Pfam PF11141 Protein of unknown function (DUF2914) 262 322 6.5E-21 T 14-10-2018 IPR022606 Protein of unknown function DUF2914 D172_019845 dc80534b976be0c46abe009e359af75f 283 Pfam PF00561 alpha/beta hydrolase fold 24 128 2.2E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_019845 dc80534b976be0c46abe009e359af75f 283 SUPERFAMILY SSF53474 3 277 2.84E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_019845 dc80534b976be0c46abe009e359af75f 283 Gene3D G3DSA:3.40.50.1820 4 279 1.1E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_020540 6bcd47b3c6acb0a5c300aa66f9c0a2b7 674 Pfam PF07676 WD40-like Beta Propeller Repeat 78 113 3.0E-10 T 14-10-2018 IPR011659 WD40-like Beta Propeller D172_020540 6bcd47b3c6acb0a5c300aa66f9c0a2b7 674 Gene3D G3DSA:2.120.10.30 243 421 7.5E-17 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_020540 6bcd47b3c6acb0a5c300aa66f9c0a2b7 674 Gene3D G3DSA:2.120.10.30 66 242 4.8E-28 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_020540 6bcd47b3c6acb0a5c300aa66f9c0a2b7 674 Gene3D G3DSA:3.40.50.1820 424 674 8.3E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_020540 6bcd47b3c6acb0a5c300aa66f9c0a2b7 674 SUPERFAMILY SSF82171 34 419 7.72E-52 T 14-10-2018 D172_020540 6bcd47b3c6acb0a5c300aa66f9c0a2b7 674 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 189 280 1.3E-5 T 14-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 D172_020540 6bcd47b3c6acb0a5c300aa66f9c0a2b7 674 Pfam PF00326 Prolyl oligopeptidase family 465 673 1.8E-55 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 D172_020540 6bcd47b3c6acb0a5c300aa66f9c0a2b7 674 SUPERFAMILY SSF53474 418 673 2.03E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_005825 8d1c37b76ada43c6c6b591e975dff6dd 245 Gene3D G3DSA:3.40.50.720 2 244 5.4E-79 T 14-10-2018 D172_005825 8d1c37b76ada43c6c6b591e975dff6dd 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 5.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_005825 8d1c37b76ada43c6c6b591e975dff6dd 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 5.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_005825 8d1c37b76ada43c6c6b591e975dff6dd 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_005825 8d1c37b76ada43c6c6b591e975dff6dd 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 245 1.1E-61 T 14-10-2018 D172_005825 8d1c37b76ada43c6c6b591e975dff6dd 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.2E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_005825 8d1c37b76ada43c6c6b591e975dff6dd 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.2E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_005825 8d1c37b76ada43c6c6b591e975dff6dd 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.2E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_005825 8d1c37b76ada43c6c6b591e975dff6dd 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.2E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_005825 8d1c37b76ada43c6c6b591e975dff6dd 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 4.2E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_005825 8d1c37b76ada43c6c6b591e975dff6dd 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.2E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_005825 8d1c37b76ada43c6c6b591e975dff6dd 245 SUPERFAMILY SSF51735 6 245 5.88E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_006495 a7490b4860a5eb60345a135ebd4864ab 184 Pfam PF07273 Protein of unknown function (DUF1439) 26 176 4.9E-40 T 14-10-2018 IPR010835 Protein of unknown function DUF1439 D172_006495 a7490b4860a5eb60345a135ebd4864ab 184 Gene3D G3DSA:3.15.10.40 12 181 3.3E-32 T 14-10-2018 D172_017555 e20fe9623ea563e97c36e05b38e47eee 371 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 138 1.1E-23 T 14-10-2018 IPR010657 ImpA, N-terminal D172_017555 e20fe9623ea563e97c36e05b38e47eee 371 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 4 363 8.2E-74 T 14-10-2018 IPR017740 Type VI secretion system-associated, ImpA D172_004140 bc9296262bbf736276f7fc4b0babccc7 153 SUPERFAMILY SSF52172 6 144 3.84E-34 T 14-10-2018 IPR011006 CheY-like superfamily D172_004140 bc9296262bbf736276f7fc4b0babccc7 153 Pfam PF00072 Response regulator receiver domain 11 133 4.1E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_004140 bc9296262bbf736276f7fc4b0babccc7 153 Gene3D G3DSA:3.40.50.2300 3 152 1.3E-36 T 14-10-2018 D172_004140 bc9296262bbf736276f7fc4b0babccc7 153 SMART SM00448 9 134 1.9E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_005490 4040a1254fea47bb8af4e4e5ae355fbc 186 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 4.0E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_005490 4040a1254fea47bb8af4e4e5ae355fbc 186 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 2.1E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_005490 4040a1254fea47bb8af4e4e5ae355fbc 186 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 10 149 2.3E-21 T 14-10-2018 IPR013362 Pilus modification type IV, PilV D172_005490 4040a1254fea47bb8af4e4e5ae355fbc 186 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_006305 3562f7bd8dff4ee218d96916fe797e69 162 Pfam PF01936 NYN domain 8 156 7.2E-36 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type D172_006305 3562f7bd8dff4ee218d96916fe797e69 162 Gene3D G3DSA:3.40.50.1010 2 162 2.6E-48 T 14-10-2018 D172_019955 b1387c680064cbadacf300d2d2876095 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 134 1.0E-32 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 D172_019955 b1387c680064cbadacf300d2d2876095 136 Gene3D G3DSA:3.30.420.270 63 131 3.7E-10 T 14-10-2018 D172_000950 61b03dff6bc305597e947c930cc41c2d 190 Pfam PF00293 NUDIX domain 50 153 7.9E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 D172_000950 61b03dff6bc305597e947c930cc41c2d 190 SUPERFAMILY SSF55811 4 183 1.62E-38 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 D172_000950 61b03dff6bc305597e947c930cc41c2d 190 ProSitePatterns PS00893 Nudix box signature. 83 104 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 D172_000950 61b03dff6bc305597e947c930cc41c2d 190 Gene3D G3DSA:3.90.79.10 10 188 2.3E-48 T 14-10-2018 D172_000950 61b03dff6bc305597e947c930cc41c2d 190 PRINTS PR00502 NUDIX hydrolase family signature 92 107 8.8E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D172_000950 61b03dff6bc305597e947c930cc41c2d 190 PRINTS PR00502 NUDIX hydrolase family signature 78 92 8.8E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 D172_011210 e74f6fc9ff587c213d5fbe6eba18c2db 154 SMART SM00671 70 105 1.7E-4 T 14-10-2018 IPR006597 Sel1-like repeat D172_011210 e74f6fc9ff587c213d5fbe6eba18c2db 154 Gene3D G3DSA:1.25.40.10 36 144 9.4E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_011210 e74f6fc9ff587c213d5fbe6eba18c2db 154 Pfam PF08238 Sel1 repeat 71 105 4.9E-5 T 14-10-2018 IPR006597 Sel1-like repeat D172_011210 e74f6fc9ff587c213d5fbe6eba18c2db 154 Pfam PF08238 Sel1 repeat 54 68 23.0 T 14-10-2018 IPR006597 Sel1-like repeat D172_011210 e74f6fc9ff587c213d5fbe6eba18c2db 154 SUPERFAMILY SSF81901 37 122 2.88E-11 T 14-10-2018 D172_016685 297d4e0a95ad6bd315af735b2b6e8330 499 Pfam PF11840 Protein of unknown function (DUF3360) 12 494 4.3E-261 T 14-10-2018 IPR021794 Protein of unknown function DUF3360 D172_001025 e1284d95811b340afa87af644cfa2c76 285 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 8.2E-100 T 14-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 D172_001025 e1284d95811b340afa87af644cfa2c76 285 Gene3D G3DSA:3.10.129.90 1 285 5.3E-110 T 14-10-2018 D172_001025 e1284d95811b340afa87af644cfa2c76 285 SUPERFAMILY SSF54637 116 283 7.46E-62 T 14-10-2018 IPR029069 HotDog domain superfamily D172_001025 e1284d95811b340afa87af644cfa2c76 285 Pfam PF13622 Thioesterase-like superfamily 32 282 4.6E-62 T 14-10-2018 D172_001025 e1284d95811b340afa87af644cfa2c76 285 SUPERFAMILY SSF54637 4 114 1.4E-41 T 14-10-2018 IPR029069 HotDog domain superfamily D172_006285 d6135807a81851ea8cf914d4a2d8f6ae 279 SUPERFAMILY SSF51197 1 276 1.79E-61 T 14-10-2018 D172_006285 d6135807a81851ea8cf914d4a2d8f6ae 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 151 253 2.7E-16 T 14-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 D172_006285 d6135807a81851ea8cf914d4a2d8f6ae 279 Gene3D G3DSA:2.60.120.330 1 279 1.4E-92 T 14-10-2018 IPR027443 Isopenicillin N synthase-like D172_006285 d6135807a81851ea8cf914d4a2d8f6ae 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 10 94 1.3E-10 T 14-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain D172_008405 8b2ba611e2f0a5bd572c752d1ea5c994 198 SUPERFAMILY SSF82808 85 197 8.37E-38 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 D172_008405 8b2ba611e2f0a5bd572c752d1ea5c994 198 Gene3D G3DSA:1.10.1220.10 1 40 9.6E-22 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 D172_008405 8b2ba611e2f0a5bd572c752d1ea5c994 198 Gene3D G3DSA:1.20.1380.10 83 198 4.0E-38 T 14-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 D172_008405 8b2ba611e2f0a5bd572c752d1ea5c994 198 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 198 45.067 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 D172_008405 8b2ba611e2f0a5bd572c752d1ea5c994 198 PIRSF PIRSF019401 1 198 7.3E-66 T 14-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 D172_008405 8b2ba611e2f0a5bd572c752d1ea5c994 198 Pfam PF17206 SeqA protein N-terminal domain 1 36 3.0E-23 T 14-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal D172_008405 8b2ba611e2f0a5bd572c752d1ea5c994 198 Pfam PF03925 SeqA protein C-terminal domain 90 196 9.7E-39 T 14-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 D172_008405 8b2ba611e2f0a5bd572c752d1ea5c994 198 SUPERFAMILY SSF47598 1 35 1.25E-12 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 D172_000920 a7af76bfec6ff873a47a81568f7a3da8 122 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 118 2.5E-30 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 D172_000920 a7af76bfec6ff873a47a81568f7a3da8 122 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 118 2.0E-61 T 14-10-2018 IPR008249 Uncharacterised protein family UPF0231 D172_019715 4c5cd56cc7f132e7552a3fa0644d7d56 723 SUPERFAMILY SSF50494 48 719 1.46E-24 T 14-10-2018 IPR009003 Peptidase S1, PA clan D172_019715 4c5cd56cc7f132e7552a3fa0644d7d56 723 Gene3D G3DSA:2.40.10.10 629 700 3.3E-5 T 14-10-2018 D172_019715 4c5cd56cc7f132e7552a3fa0644d7d56 723 Pfam PF10459 Peptidase S46 24 721 4.3E-264 T 14-10-2018 IPR019500 Peptidase S46 GO:0008239|GO:0070009 D172_004875 1fb9f43aeb1d6f16e21073d086217a59 206 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 35 179 2.1E-32 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 D172_004875 1fb9f43aeb1d6f16e21073d086217a59 206 Gene3D G3DSA:2.40.100.10 32 201 1.4E-42 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily D172_004875 1fb9f43aeb1d6f16e21073d086217a59 206 SUPERFAMILY SSF50891 33 201 1.46E-38 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily D172_014765 33939a0f6ebde94ac0f3333a222ca13d 156 SUPERFAMILY SSF51316 1 141 4.08E-29 T 14-10-2018 IPR011057 Mss4-like superfamily D172_014765 33939a0f6ebde94ac0f3333a222ca13d 156 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 113 3.0E-11 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 D172_014765 33939a0f6ebde94ac0f3333a222ca13d 156 Gene3D G3DSA:2.170.150.70 3 112 2.1E-13 T 14-10-2018 D172_007525 1116eca3479e0d719c8ab6508630cf45 325 Gene3D G3DSA:2.70.98.10 1 324 4.6E-89 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 D172_007525 1116eca3479e0d719c8ab6508630cf45 325 Pfam PF01263 Aldose 1-epimerase 7 309 3.3E-70 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 D172_007525 1116eca3479e0d719c8ab6508630cf45 325 SUPERFAMILY SSF74650 4 320 1.63E-84 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 D172_018500 48a3f18f03b7fed08c57fbaeb1ccfbdc 335 SMART SM00342 247 329 4.2E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_018500 48a3f18f03b7fed08c57fbaeb1ccfbdc 335 Pfam PF12833 Helix-turn-helix domain 254 330 2.0E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_018500 48a3f18f03b7fed08c57fbaeb1ccfbdc 335 SUPERFAMILY SSF46689 283 331 1.43E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_018500 48a3f18f03b7fed08c57fbaeb1ccfbdc 335 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 36 206 2.1E-19 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal D172_018500 48a3f18f03b7fed08c57fbaeb1ccfbdc 335 Gene3D G3DSA:1.10.10.60 226 333 7.0E-18 T 14-10-2018 D172_018500 48a3f18f03b7fed08c57fbaeb1ccfbdc 335 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 284 325 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 D172_015810 a030e43b40aa33dcc3e949830827f218 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 60 187 2.3E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_015810 a030e43b40aa33dcc3e949830827f218 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 188 2.1E-34 T 14-10-2018 D172_015810 a030e43b40aa33dcc3e949830827f218 221 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 216 3.9E-54 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 D172_015810 a030e43b40aa33dcc3e949830827f218 221 SUPERFAMILY SSF56784 1 218 4.07E-54 T 14-10-2018 IPR036412 HAD-like superfamily D172_015810 a030e43b40aa33dcc3e949830827f218 221 Gene3D G3DSA:1.10.150.240 18 91 6.9E-58 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 D172_015810 a030e43b40aa33dcc3e949830827f218 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 70 182 9.9E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 D172_015810 a030e43b40aa33dcc3e949830827f218 221 Gene3D G3DSA:3.40.50.1000 6 211 6.9E-58 T 14-10-2018 IPR023214 HAD superfamily D172_000040 9a8c63e4f0ce4fded71b68be86d06a91 187 Pfam PF01300 Telomere recombination 13 182 1.3E-43 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 D172_000040 9a8c63e4f0ce4fded71b68be86d06a91 187 SUPERFAMILY SSF55821 7 185 6.41E-52 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily D172_000040 9a8c63e4f0ce4fded71b68be86d06a91 187 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 4 186 38.506 T 14-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 D172_000040 9a8c63e4f0ce4fded71b68be86d06a91 187 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 9 179 1.8E-38 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 D172_000040 9a8c63e4f0ce4fded71b68be86d06a91 187 Gene3D G3DSA:3.90.870.10 3 186 1.5E-59 T 14-10-2018 D172_019395 850a8fc84b79fe4649d739c098465ae5 107 Gene3D G3DSA:3.30.70.20 2 101 7.7E-27 T 14-10-2018 D172_019395 850a8fc84b79fe4649d739c098465ae5 107 SUPERFAMILY SSF54862 3 95 5.12E-24 T 14-10-2018 D172_019395 850a8fc84b79fe4649d739c098465ae5 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 106 1.3E-16 T 14-10-2018 IPR022569 Ferredoxin, C-terminal D172_019395 850a8fc84b79fe4649d739c098465ae5 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.6E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 D172_019395 850a8fc84b79fe4649d739c098465ae5 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.6E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 D172_019395 850a8fc84b79fe4649d739c098465ae5 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.6E-11 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 D172_004935 47b91fcd53c620663da7c0ed43c5131d 343 Gene3D G3DSA:3.10.520.20 27 343 8.5E-98 T 14-10-2018 D172_004935 47b91fcd53c620663da7c0ed43c5131d 343 PIRSF PIRSF006268 3 342 7.0E-80 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 D172_004935 47b91fcd53c620663da7c0ed43c5131d 343 Pfam PF02424 ApbE family 41 321 3.1E-75 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 D172_004935 47b91fcd53c620663da7c0ed43c5131d 343 SUPERFAMILY SSF143631 35 343 2.54E-89 T 14-10-2018 IPR003374 ApbE-like superfamily D172_020525 9c6af82cff9b31486a675c14b8a79f00 241 Gene3D G3DSA:1.10.10.200 17 78 3.9E-18 T 14-10-2018 IPR017856 Integrase-like, N-terminal D172_020525 9c6af82cff9b31486a675c14b8a79f00 241 Pfam PF01709 Transcriptional regulator 9 237 7.6E-71 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_020525 9c6af82cff9b31486a675c14b8a79f00 241 Gene3D G3DSA:3.30.70.980 131 202 8.5E-42 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_020525 9c6af82cff9b31486a675c14b8a79f00 241 Gene3D G3DSA:3.30.70.980 83 236 8.5E-42 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_020525 9c6af82cff9b31486a675c14b8a79f00 241 SUPERFAMILY SSF75625 5 237 6.8E-73 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_020525 9c6af82cff9b31486a675c14b8a79f00 241 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 239 26.122 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_009895 82366f3601e81d28c476c2f076958bb6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 4.2E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009895 82366f3601e81d28c476c2f076958bb6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 4.2E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009895 82366f3601e81d28c476c2f076958bb6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 4.2E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009895 82366f3601e81d28c476c2f076958bb6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 4.2E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009895 82366f3601e81d28c476c2f076958bb6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 4.2E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009895 82366f3601e81d28c476c2f076958bb6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 4.2E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009895 82366f3601e81d28c476c2f076958bb6 248 Gene3D G3DSA:3.40.50.720 1 247 2.5E-68 T 14-10-2018 D172_009895 82366f3601e81d28c476c2f076958bb6 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D172_009895 82366f3601e81d28c476c2f076958bb6 248 Pfam PF00106 short chain dehydrogenase 14 208 1.7E-49 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_009895 82366f3601e81d28c476c2f076958bb6 248 SUPERFAMILY SSF51735 10 242 1.6E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_008380 938352766da17eb6c92a71f7d13b8d74 147 Gene3D G3DSA:3.30.1490.190 85 142 2.1E-23 T 14-10-2018 D172_008380 938352766da17eb6c92a71f7d13b8d74 147 Pfam PF01475 Ferric uptake regulator family 10 130 7.8E-45 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 D172_008380 938352766da17eb6c92a71f7d13b8d74 147 Gene3D G3DSA:1.10.10.10 2 84 8.9E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_008380 938352766da17eb6c92a71f7d13b8d74 147 SUPERFAMILY SSF46785 8 135 1.43E-42 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_018090 2273b11b882258a11525b36b944540a6 272 SUPERFAMILY SSF50242 43 133 2.62E-7 T 14-10-2018 IPR008993 Tissue inhibitor of metalloproteinases-like, OB-fold D172_018395 ab6d089fd36230f0d1d5fa9ebada5aef 163 Pfam PF11391 Protein of unknown function (DUF2798) 25 85 1.8E-12 T 14-10-2018 IPR021529 Protein of unknown function DUF2798 D172_018395 ab6d089fd36230f0d1d5fa9ebada5aef 163 Pfam PF11391 Protein of unknown function (DUF2798) 100 160 2.0E-7 T 14-10-2018 IPR021529 Protein of unknown function DUF2798 D172_016530 bb345a81c30737772b216895b9e8615b 205 Gene3D G3DSA:3.30.1330.200 25 185 7.6E-49 T 14-10-2018 IPR038592 CheD-like superfamily D172_016530 bb345a81c30737772b216895b9e8615b 205 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 23 177 27.223 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 D172_016530 bb345a81c30737772b216895b9e8615b 205 Pfam PF03975 CheD chemotactic sensory transduction 70 173 2.4E-28 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 D172_016530 bb345a81c30737772b216895b9e8615b 205 SUPERFAMILY SSF64438 28 179 4.94E-47 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic D172_003860 fc4e4c96ec23844d0cf2b2e2ad9d8288 198 PIRSF PIRSF011489 1 194 4.8E-54 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 D172_003860 fc4e4c96ec23844d0cf2b2e2ad9d8288 198 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 184 4.7E-33 T 14-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 D172_019735 2c361704c0d0e6e2f9425c95c8272f32 372 Pfam PF02810 SEC-C motif 5 22 1.4E-7 T 14-10-2018 IPR004027 SEC-C motif D172_019735 2c361704c0d0e6e2f9425c95c8272f32 372 SUPERFAMILY SSF103642 3 24 1.8E-7 T 14-10-2018 D172_016300 3918b318e0c020bacc8578328d5814c9 103 Pfam PF06291 Bor protein 19 94 6.3E-27 T 14-10-2018 IPR010438 Bor GO:0009279 D172_016300 3918b318e0c020bacc8578328d5814c9 103 ProDom PD020173 BOR LIPOPROTEIN PLASMID ISS HOMOLOG MEMBRANE FROM PRECURSOR PALMITATE DLP12 1 94 1.0E-4 T 14-10-2018 IPR010438 Bor GO:0009279 D172_010140 05c86f72c734071922e184400f2b0c23 522 SUPERFAMILY SSF56322 13 516 2.75E-144 T 14-10-2018 IPR005801 ADC synthase GO:0009058 D172_010140 05c86f72c734071922e184400f2b0c23 522 PRINTS PR00095 Anthranilate synthase component I signature 355 368 3.8E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_010140 05c86f72c734071922e184400f2b0c23 522 PRINTS PR00095 Anthranilate synthase component I signature 369 382 3.8E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_010140 05c86f72c734071922e184400f2b0c23 522 PRINTS PR00095 Anthranilate synthase component I signature 449 463 3.8E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_010140 05c86f72c734071922e184400f2b0c23 522 PRINTS PR00095 Anthranilate synthase component I signature 464 478 3.8E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_010140 05c86f72c734071922e184400f2b0c23 522 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 195 1.8E-19 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_010140 05c86f72c734071922e184400f2b0c23 522 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 518 9.9E-213 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_010140 05c86f72c734071922e184400f2b0c23 522 Gene3D G3DSA:3.60.120.10 7 521 6.9E-166 T 14-10-2018 IPR005801 ADC synthase GO:0009058 D172_010140 05c86f72c734071922e184400f2b0c23 522 Pfam PF00425 chorismate binding enzyme 247 507 5.0E-82 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal D172_010140 05c86f72c734071922e184400f2b0c23 522 PIRSF PIRSF001373 4 522 6.9E-245 T 14-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_006765 d5b1978fb135a32b6873b327ed1bcbac 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 68 3.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 D172_006765 d5b1978fb135a32b6873b327ed1bcbac 220 SUPERFAMILY SSF46689 12 82 4.89E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_006765 d5b1978fb135a32b6873b327ed1bcbac 220 Gene3D G3DSA:1.10.357.10 6 194 2.2E-18 T 14-10-2018 D172_006250 4947e0e90e4ceea758bd892b2587ca4d 282 Gene3D G3DSA:3.20.20.410 1 261 2.3E-41 T 14-10-2018 IPR036520 UPF0759 superfamily D172_006250 4947e0e90e4ceea758bd892b2587ca4d 282 SUPERFAMILY SSF117396 1 261 2.88E-65 T 14-10-2018 IPR036520 UPF0759 superfamily D172_006250 4947e0e90e4ceea758bd892b2587ca4d 282 Pfam PF01904 Protein of unknown function DUF72 21 257 1.3E-52 T 14-10-2018 IPR002763 Protein of unknown function DUF72 D172_005995 fe9ce98dc87ac07ad0b0d20908c73597 258 Pfam PF01925 Sulfite exporter TauE/SafE 15 252 7.8E-38 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 D172_013515 8179b581c17ead35104835e5ed1f73a6 227 Pfam PF02107 Flagellar L-ring protein 46 224 6.6E-61 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 D172_013515 8179b581c17ead35104835e5ed1f73a6 227 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 224 27.086 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 D172_013515 8179b581c17ead35104835e5ed1f73a6 227 PRINTS PR01008 Flagellar L-ring protein signature 140 155 2.2E-24 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 D172_013515 8179b581c17ead35104835e5ed1f73a6 227 PRINTS PR01008 Flagellar L-ring protein signature 67 79 2.2E-24 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 D172_013515 8179b581c17ead35104835e5ed1f73a6 227 PRINTS PR01008 Flagellar L-ring protein signature 187 201 2.2E-24 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 D172_013515 8179b581c17ead35104835e5ed1f73a6 227 PRINTS PR01008 Flagellar L-ring protein signature 166 182 2.2E-24 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 D172_013515 8179b581c17ead35104835e5ed1f73a6 227 PRINTS PR01008 Flagellar L-ring protein signature 203 217 2.2E-24 T 14-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 D172_007415 68a1ed96384f271ce33400135ec55546 170 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 30 3.0E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_007415 68a1ed96384f271ce33400135ec55546 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 21 6.4E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site D172_002495 61cfe9a76a782beb9d708530ae73677e 325 Gene3D G3DSA:3.40.1190.20 1 324 3.9E-93 T 14-10-2018 IPR029056 Ribokinase-like D172_002495 61cfe9a76a782beb9d708530ae73677e 325 Pfam PF00294 pfkB family carbohydrate kinase 1 314 1.0E-61 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB D172_002495 61cfe9a76a782beb9d708530ae73677e 325 SUPERFAMILY SSF53613 1 321 2.18E-74 T 14-10-2018 IPR029056 Ribokinase-like D172_003475 0285f6bbb163b7ae702d39b74f08e20f 85 PIRSF PIRSF003113 1 84 1.7E-20 T 14-10-2018 IPR002634 BolA protein D172_003475 0285f6bbb163b7ae702d39b74f08e20f 85 Gene3D G3DSA:3.30.300.90 1 83 2.6E-30 T 14-10-2018 D172_003475 0285f6bbb163b7ae702d39b74f08e20f 85 SUPERFAMILY SSF82657 2 81 8.76E-26 T 14-10-2018 IPR036065 BolA-like superfamily D172_003475 0285f6bbb163b7ae702d39b74f08e20f 85 Pfam PF01722 BolA-like protein 11 74 3.6E-12 T 14-10-2018 IPR002634 BolA protein D172_005010 0c85f52afde563ccc615296ad7fd2a1b 333 SMART SM00342 249 331 9.3E-8 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_005010 0c85f52afde563ccc615296ad7fd2a1b 333 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 209 5.2E-10 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal D172_005010 0c85f52afde563ccc615296ad7fd2a1b 333 Pfam PF12833 Helix-turn-helix domain 256 331 1.7E-10 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 D172_005010 0c85f52afde563ccc615296ad7fd2a1b 333 Gene3D G3DSA:1.10.10.60 229 333 2.8E-15 T 14-10-2018 D172_005010 0c85f52afde563ccc615296ad7fd2a1b 333 SUPERFAMILY SSF46689 287 332 8.51E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_005660 5046b267d1d213ea9cbdd1a5015c1026 541 Pfam PF03961 Flagellar Assembly Protein A 76 537 3.6E-126 T 14-10-2018 IPR005646 Flagellar assembly protein A D172_005660 5046b267d1d213ea9cbdd1a5015c1026 541 SUPERFAMILY SSF63848 273 313 6.67E-6 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 D172_019520 5d232111960bfd97525b5a8875d8da6d 404 PIRSF PIRSF003180 1 404 1.4E-128 T 14-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing D172_019520 5d232111960bfd97525b5a8875d8da6d 404 SMART SM00052 2 196 7.8E-4 T 14-10-2018 IPR001633 EAL domain D172_019520 5d232111960bfd97525b5a8875d8da6d 404 Gene3D G3DSA:3.20.20.450 2 197 1.9E-13 T 14-10-2018 IPR035919 EAL domain superfamily D172_019520 5d232111960bfd97525b5a8875d8da6d 404 Gene3D G3DSA:1.10.3210.10 204 387 2.6E-22 T 14-10-2018 D172_019520 5d232111960bfd97525b5a8875d8da6d 404 Pfam PF08668 HDOD domain 205 320 4.3E-16 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD D172_019520 5d232111960bfd97525b5a8875d8da6d 404 SUPERFAMILY SSF109604 182 400 8.47E-45 T 14-10-2018 D172_019520 5d232111960bfd97525b5a8875d8da6d 404 SUPERFAMILY SSF141868 3 195 4.05E-24 T 14-10-2018 IPR035919 EAL domain superfamily D172_019520 5d232111960bfd97525b5a8875d8da6d 404 Pfam PF00563 EAL domain 58 191 6.3E-10 T 14-10-2018 IPR001633 EAL domain D172_013800 9a17bde8c4eaa82bb931b61c611b5b66 270 Pfam PF04338 Protein of unknown function, DUF481 50 270 7.6E-51 T 14-10-2018 IPR007433 Protein of unknown function DUF481 D172_019920 ddc12e91144006af4650c869519b6724 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 70 288 2.9E-12 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D172_019920 ddc12e91144006af4650c869519b6724 297 SUPERFAMILY SSF53850 52 289 1.45E-23 T 14-10-2018 D172_019920 ddc12e91144006af4650c869519b6724 297 Gene3D G3DSA:3.40.190.10 71 289 5.8E-16 T 14-10-2018 D172_019920 ddc12e91144006af4650c869519b6724 297 Gene3D G3DSA:3.40.190.10 143 251 5.8E-16 T 14-10-2018 D172_020235 8a9eadfb449b5e99f7d8e771074e9a57 135 SMART SM00422 1 69 5.7E-26 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_020235 8a9eadfb449b5e99f7d8e771074e9a57 135 SUPERFAMILY SSF46955 1 111 3.66E-28 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily D172_020235 8a9eadfb449b5e99f7d8e771074e9a57 135 Pfam PF13411 MerR HTH family regulatory protein 1 64 1.6E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_020235 8a9eadfb449b5e99f7d8e771074e9a57 135 Gene3D G3DSA:1.10.1660.10 1 115 3.0E-29 T 14-10-2018 D172_020235 8a9eadfb449b5e99f7d8e771074e9a57 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.1E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_020235 8a9eadfb449b5e99f7d8e771074e9a57 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.1E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_020235 8a9eadfb449b5e99f7d8e771074e9a57 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.1E-9 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 D172_016590 3d921ecf20bc5426e9b5894b2ec605ef 291 SUPERFAMILY SSF81452 3 291 3.24E-80 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016590 3d921ecf20bc5426e9b5894b2ec605ef 291 Gene3D G3DSA:1.10.287.70 1 74 1.7E-19 T 14-10-2018 D172_016590 3d921ecf20bc5426e9b5894b2ec605ef 291 Gene3D G3DSA:1.20.120.80 76 291 2.0E-63 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016590 3d921ecf20bc5426e9b5894b2ec605ef 291 Pfam PF00510 Cytochrome c oxidase subunit III 8 290 4.5E-52 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 D172_016095 aaf8bc3e8dcefce0028b1128db6ddf56 327 Gene3D G3DSA:3.40.190.10 8 272 9.4E-65 T 14-10-2018 D172_016095 aaf8bc3e8dcefce0028b1128db6ddf56 327 Pfam PF09084 NMT1/THI5 like 16 225 6.0E-44 T 14-10-2018 IPR015168 SsuA/THI5-like D172_016095 aaf8bc3e8dcefce0028b1128db6ddf56 327 SUPERFAMILY SSF53850 3 236 6.02E-23 T 14-10-2018 D172_016095 aaf8bc3e8dcefce0028b1128db6ddf56 327 Gene3D G3DSA:3.40.190.10 87 186 9.4E-65 T 14-10-2018 D172_012130 7aa59e89498da55fdbb7e66ad7986a93 815 Gene3D G3DSA:3.30.230.10 553 785 1.6E-91 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup D172_012130 7aa59e89498da55fdbb7e66ad7986a93 815 Pfam PF13654 AAA domain 40 550 9.3E-163 T 14-10-2018 D172_012130 7aa59e89498da55fdbb7e66ad7986a93 815 Gene3D G3DSA:3.40.50.300 226 463 8.5E-53 T 14-10-2018 D172_012130 7aa59e89498da55fdbb7e66ad7986a93 815 Gene3D G3DSA:3.40.50.300 17 215 1.5E-21 T 14-10-2018 D172_012130 7aa59e89498da55fdbb7e66ad7986a93 815 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 687 706 1.2E-9 T 14-10-2018 D172_012130 7aa59e89498da55fdbb7e66ad7986a93 815 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 576 592 1.2E-9 T 14-10-2018 D172_012130 7aa59e89498da55fdbb7e66ad7986a93 815 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 717 735 1.2E-9 T 14-10-2018 D172_012130 7aa59e89498da55fdbb7e66ad7986a93 815 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 657 676 1.2E-9 T 14-10-2018 D172_012130 7aa59e89498da55fdbb7e66ad7986a93 815 SUPERFAMILY SSF54211 575 768 1.48E-34 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold D172_012130 7aa59e89498da55fdbb7e66ad7986a93 815 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 660 765 1.6E-10 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 D172_019350 a876cea6bc7fc8910ad6d27336e55377 746 SUPERFAMILY SSF82866 199 382 2.49E-20 T 14-10-2018 D172_019350 a876cea6bc7fc8910ad6d27336e55377 746 Gene3D G3DSA:1.20.1640.10 206 391 5.9E-9 T 14-10-2018 D172_019350 a876cea6bc7fc8910ad6d27336e55377 746 SUPERFAMILY SSF82866 592 735 1.44E-10 T 14-10-2018 D172_007850 7d715f5605519f1fa870f605dd3cfabd 415 SUPERFAMILY SSF51556 287 352 5.22E-5 T 14-10-2018 IPR032466 Metal-dependent hydrolase D172_007850 7d715f5605519f1fa870f605dd3cfabd 415 SUPERFAMILY SSF51338 25 391 6.98E-21 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D172_007850 7d715f5605519f1fa870f605dd3cfabd 415 Gene3D G3DSA:2.30.40.10 31 385 9.4E-73 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 D172_007850 7d715f5605519f1fa870f605dd3cfabd 415 Pfam PF01979 Amidohydrolase family 235 387 4.8E-11 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 D172_007850 7d715f5605519f1fa870f605dd3cfabd 415 Gene3D G3DSA:3.20.20.140 80 352 9.4E-73 T 14-10-2018 D172_015725 efcb054cc47e62ded71042f03825484f 1285 Pfam PF13502 AsmA-like C-terminal region 1010 1246 1.3E-53 T 14-10-2018 IPR032712 AsmA-like, C-terminal D172_015725 efcb054cc47e62ded71042f03825484f 1285 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 14 1257 1.4E-247 T 14-10-2018 IPR011836 Conserved hypothetical protein CHP02099 D172_015725 efcb054cc47e62ded71042f03825484f 1285 Pfam PF13116 Protein of unknown function 496 781 2.5E-72 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 D172_009370 99ce193071c9f28291c2c9f77c6d453a 201 PIRSF PIRSF011444 2 194 8.8E-73 T 14-10-2018 IPR009706 Protein of unknown function DUF1287 D172_009370 99ce193071c9f28291c2c9f77c6d453a 201 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 36 191 5.0E-47 T 14-10-2018 IPR009706 Protein of unknown function DUF1287 D172_009370 99ce193071c9f28291c2c9f77c6d453a 201 Pfam PF06940 Domain of unknown function (DUF1287) 30 191 3.2E-65 T 14-10-2018 IPR009706 Protein of unknown function DUF1287 D172_020380 2bc0eb6e1740da087c0db5e24a9dea9e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.5E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020380 2bc0eb6e1740da087c0db5e24a9dea9e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.5E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020380 2bc0eb6e1740da087c0db5e24a9dea9e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.5E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020380 2bc0eb6e1740da087c0db5e24a9dea9e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.5E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020380 2bc0eb6e1740da087c0db5e24a9dea9e 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.5E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020380 2bc0eb6e1740da087c0db5e24a9dea9e 249 Gene3D G3DSA:3.40.50.720 1 247 1.1E-44 T 14-10-2018 D172_020380 2bc0eb6e1740da087c0db5e24a9dea9e 249 SUPERFAMILY SSF51735 4 236 1.25E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_020380 2bc0eb6e1740da087c0db5e24a9dea9e 249 Pfam PF00106 short chain dehydrogenase 4 196 8.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020380 2bc0eb6e1740da087c0db5e24a9dea9e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020380 2bc0eb6e1740da087c0db5e24a9dea9e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020380 2bc0eb6e1740da087c0db5e24a9dea9e 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020380 2bc0eb6e1740da087c0db5e24a9dea9e 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 D172_010050 db9b498196c75b71bb48c2c9c9749b4d 215 Pfam PF01081 KDPG and KHG aldolase 13 188 3.2E-42 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D172_010050 db9b498196c75b71bb48c2c9c9749b4d 215 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 14 210 1.4E-49 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 D172_010050 db9b498196c75b71bb48c2c9c9749b4d 215 SUPERFAMILY SSF51569 9 210 5.86E-54 T 14-10-2018 D172_010050 db9b498196c75b71bb48c2c9c9749b4d 215 Gene3D G3DSA:3.20.20.70 4 215 8.4E-67 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_006480 b5c004b0ebf22be1b3c650c82b607ed5 108 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 54 3.0E-22 T 14-10-2018 D172_013870 1b2b0be8fbc69c6c9d6cc4ab191b2825 234 Pfam PF11201 Protein of unknown function (DUF2982) 74 223 1.2E-49 T 14-10-2018 IPR021367 Protein of unknown function DUF2982 D172_019220 b5bf9f7693ffb72154535a3d836be711 44 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 15 40 0.006 T 14-10-2018 D172_019220 b5bf9f7693ffb72154535a3d836be711 44 SUPERFAMILY SSF57840 1 40 4.05E-13 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_019220 b5bf9f7693ffb72154535a3d836be711 44 Pfam PF00444 Ribosomal protein L36 1 40 3.3E-17 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_019220 b5bf9f7693ffb72154535a3d836be711 44 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 40 15.88 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_019220 b5bf9f7693ffb72154535a3d836be711 44 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 40 7.0E-8 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003630 5046c387e4967ef5a896dd5689fb66a4 235 SUPERFAMILY SSF53167 1 230 1.44E-69 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 D172_003630 5046c387e4967ef5a896dd5689fb66a4 235 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 3 230 2.9E-91 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 D172_003630 5046c387e4967ef5a896dd5689fb66a4 235 Pfam PF01048 Phosphorylase superfamily 3 227 3.8E-47 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 D172_003630 5046c387e4967ef5a896dd5689fb66a4 235 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 46.371 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 D172_003630 5046c387e4967ef5a896dd5689fb66a4 235 Gene3D G3DSA:3.40.50.1580 1 233 2.5E-67 T 14-10-2018 D172_000480 e9e0f9c866b2234d58757e34648b8d87 587 SUPERFAMILY SSF52540 5 232 4.05E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_000480 e9e0f9c866b2234d58757e34648b8d87 587 Gene3D G3DSA:3.40.50.300 1 190 1.0E-7 T 14-10-2018 D172_000480 e9e0f9c866b2234d58757e34648b8d87 587 Pfam PF07693 KAP family P-loop domain 3 40 7.2E-6 T 14-10-2018 IPR011646 KAP family P-loop domain D172_005145 b211d3c293aa4fda16f2d93318e72ecc 715 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 136 3.8E-6 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_005145 b211d3c293aa4fda16f2d93318e72ecc 715 Pfam PF00593 TonB dependent receptor 194 713 1.1E-25 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_005145 b211d3c293aa4fda16f2d93318e72ecc 715 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 698 715 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site D172_005145 b211d3c293aa4fda16f2d93318e72ecc 715 Gene3D G3DSA:2.170.130.10 30 142 2.0E-7 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_005145 b211d3c293aa4fda16f2d93318e72ecc 715 SUPERFAMILY SSF56935 57 715 9.89E-70 T 14-10-2018 D172_013620 9a3ccce082275502ca1f3b7355334f5a 286 Pfam PF01555 DNA methylase 42 265 5.2E-53 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 D172_013620 9a3ccce082275502ca1f3b7355334f5a 286 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 46 51 - T 14-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 D172_013620 9a3ccce082275502ca1f3b7355334f5a 286 SUPERFAMILY SSF53335 22 272 3.27E-60 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_013620 9a3ccce082275502ca1f3b7355334f5a 286 Gene3D G3DSA:3.40.50.150 23 285 3.6E-71 T 14-10-2018 D172_013620 9a3ccce082275502ca1f3b7355334f5a 286 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 73 93 6.3E-34 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 D172_013620 9a3ccce082275502ca1f3b7355334f5a 286 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 41 55 6.3E-34 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 D172_013620 9a3ccce082275502ca1f3b7355334f5a 286 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 207 224 6.3E-34 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 D172_013620 9a3ccce082275502ca1f3b7355334f5a 286 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 226 244 6.3E-34 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 D172_013620 9a3ccce082275502ca1f3b7355334f5a 286 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 249 269 6.3E-34 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 D172_002630 12157434ea4552d4cda71d8984926f53 377 Pfam PF01553 Acyltransferase 91 239 1.0E-10 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 D172_002630 12157434ea4552d4cda71d8984926f53 377 SUPERFAMILY SSF69593 89 194 3.27E-7 T 14-10-2018 D172_004965 775670c2a7a1f995a1d3a4f2c86b75e3 118 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 21 117 4.2E-34 T 14-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 D172_004965 775670c2a7a1f995a1d3a4f2c86b75e3 118 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 28 102 1.6E-15 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 D172_016680 6b18985dc468b55f31eb7fa1bfbfcfca 328 SUPERFAMILY SSF55961 153 318 7.89E-11 T 14-10-2018 D172_005615 00910700d1119d8fe855af52110d161c 109 SUPERFAMILY SSF55159 30 107 2.35E-19 T 14-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 D172_005615 00910700d1119d8fe855af52110d161c 109 Gene3D G3DSA:3.30.780.10 30 109 2.7E-26 T 14-10-2018 D172_005615 00910700d1119d8fe855af52110d161c 109 PIRSF PIRSF037511 1 109 3.7E-27 T 14-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 D172_005615 00910700d1119d8fe855af52110d161c 109 Pfam PF01253 Translation initiation factor SUI1 34 99 1.0E-13 T 14-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 D172_003035 828bd412476908593825b7649e459035 552 Pfam PF00144 Beta-lactamase 164 517 5.5E-62 T 14-10-2018 IPR001466 Beta-lactamase-related D172_003035 828bd412476908593825b7649e459035 552 Gene3D G3DSA:3.40.710.10 145 540 7.3E-81 T 14-10-2018 D172_003035 828bd412476908593825b7649e459035 552 SUPERFAMILY SSF56601 173 517 2.62E-71 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D172_013020 6251684dff137827531dcbfcc62fe92d 117 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 2.5E-25 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D172_013020 6251684dff137827531dcbfcc62fe92d 117 Pfam PF03840 Preprotein translocase SecG subunit 4 72 1.3E-21 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D172_013020 6251684dff137827531dcbfcc62fe92d 117 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.3E-39 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D172_013020 6251684dff137827531dcbfcc62fe92d 117 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 2.3E-39 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D172_013020 6251684dff137827531dcbfcc62fe92d 117 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.3E-39 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D172_013020 6251684dff137827531dcbfcc62fe92d 117 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 2.3E-39 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 D172_004725 478321a68f8a66cfabecbfd3554650e5 327 Gene3D G3DSA:1.25.40.10 143 312 3.4E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_013220 0952623c693bae04e5f51d45a8b97544 105 Pfam PF07130 YebG protein 1 74 1.4E-31 T 14-10-2018 IPR009813 Uncharacterised protein family YebG D172_013220 0952623c693bae04e5f51d45a8b97544 105 Gene3D G3DSA:1.10.10.710 21 92 2.7E-12 T 14-10-2018 IPR038627 YebG-like superfamily D172_020050 2104ecedbe0dbe2da679241faf0daac2 337 SUPERFAMILY SSF52151 17 240 1.52E-36 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D172_020050 2104ecedbe0dbe2da679241faf0daac2 337 Pfam PF01734 Patatin-like phospholipase 22 211 6.8E-14 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 D172_020050 2104ecedbe0dbe2da679241faf0daac2 337 Gene3D G3DSA:3.40.1090.10 3 92 6.6E-13 T 14-10-2018 D172_020050 2104ecedbe0dbe2da679241faf0daac2 337 Gene3D G3DSA:3.40.1090.10 94 248 3.1E-8 T 14-10-2018 D172_010285 a6efb46ae295dfc1d31e03f7753cc4f1 856 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 181 8.9E-21 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_010285 a6efb46ae295dfc1d31e03f7753cc4f1 856 Pfam PF00593 TonB dependent receptor 313 854 2.3E-44 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_010285 a6efb46ae295dfc1d31e03f7753cc4f1 856 Gene3D G3DSA:2.170.130.10 40 185 2.0E-33 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily D172_010285 a6efb46ae295dfc1d31e03f7753cc4f1 856 Gene3D G3DSA:2.40.170.20 190 856 1.3E-57 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_010285 a6efb46ae295dfc1d31e03f7753cc4f1 856 SUPERFAMILY SSF56935 46 856 1.59E-103 T 14-10-2018 D172_020190 e99aa3977f8f540416ce2296cb263ec6 449 SUPERFAMILY SSF51569 2 445 1.68E-202 T 14-10-2018 D172_020190 e99aa3977f8f540416ce2296cb263ec6 449 Gene3D G3DSA:3.20.20.70 181 446 4.8E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_020190 e99aa3977f8f540416ce2296cb263ec6 449 Pfam PF01474 Class-II DAHP synthetase family 4 441 1.5E-208 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 D172_020190 e99aa3977f8f540416ce2296cb263ec6 449 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 4 448 6.7E-213 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 D172_020840 14cabfa800552af8cbe580dfb432c19e 488 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 488 42.472 T 14-10-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 D172_020840 14cabfa800552af8cbe580dfb432c19e 488 SMART SM00471 55 261 5.6E-9 T 14-10-2018 IPR003607 HD/PDEase domain D172_020840 14cabfa800552af8cbe580dfb432c19e 488 Gene3D G3DSA:1.10.3210.10 26 244 1.4E-78 T 14-10-2018 D172_020840 14cabfa800552af8cbe580dfb432c19e 488 SUPERFAMILY SSF109604 23 485 1.06E-62 T 14-10-2018 D172_020840 14cabfa800552af8cbe580dfb432c19e 488 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 25 485 2.0E-115 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 D172_020840 14cabfa800552af8cbe580dfb432c19e 488 Gene3D G3DSA:1.10.3550.10 114 477 1.4E-78 T 14-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal D172_020840 14cabfa800552af8cbe580dfb432c19e 488 Pfam PF01966 HD domain 59 126 2.2E-8 T 14-10-2018 IPR006674 HD domain D172_020840 14cabfa800552af8cbe580dfb432c19e 488 Pfam PF13286 Phosphohydrolase-associated domain 455 482 6.0E-5 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain D172_020840 14cabfa800552af8cbe580dfb432c19e 488 Gene3D G3DSA:1.10.3410.10 245 376 1.4E-78 T 14-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 D172_016305 15340f95c0d20257bf8633f462b21feb 1191 SUPERFAMILY SSF55486 842 1072 1.49E-18 T 14-10-2018 D172_016305 15340f95c0d20257bf8633f462b21feb 1191 Pfam PF01433 Peptidase family M1 domain 844 1045 5.3E-12 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 D172_016305 15340f95c0d20257bf8633f462b21feb 1191 Gene3D G3DSA:1.10.390.60 837 1082 4.3E-29 T 14-10-2018 D172_000690 a01bbfd1135a300da071adf99fc8428b 280 Pfam PF00892 EamA-like transporter family 140 277 2.0E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_000690 a01bbfd1135a300da071adf99fc8428b 280 SUPERFAMILY SSF103481 186 279 5.69E-9 T 14-10-2018 D172_000690 a01bbfd1135a300da071adf99fc8428b 280 SUPERFAMILY SSF103481 25 127 6.8E-7 T 14-10-2018 D172_013790 3bf867fd3dceb9b8a125bb697c8e590c 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 135 2.2E-13 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain D172_013790 3bf867fd3dceb9b8a125bb697c8e590c 161 Gene3D G3DSA:3.10.50.40 3 153 2.4E-52 T 14-10-2018 D172_013790 3bf867fd3dceb9b8a125bb697c8e590c 161 SUPERFAMILY SSF54534 3 139 2.16E-35 T 14-10-2018 D172_013790 3bf867fd3dceb9b8a125bb697c8e590c 161 Gene3D G3DSA:2.40.10.330 71 120 2.4E-52 T 14-10-2018 D172_001465 38f7e0b46c8efa33b22910d19b23c3c2 314 Gene3D G3DSA:3.40.1790.10 1 310 9.3E-110 T 14-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 D172_001465 38f7e0b46c8efa33b22910d19b23c3c2 314 Pfam PF04227 Indigoidine synthase A like protein 13 301 2.2E-108 T 14-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 D172_001465 38f7e0b46c8efa33b22910d19b23c3c2 314 SUPERFAMILY SSF110581 8 303 4.45E-98 T 14-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 D172_001465 38f7e0b46c8efa33b22910d19b23c3c2 314 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 12 305 38.478 T 14-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 D172_011045 ff9b11527dcfac3ec45188a41842d431 108 SUPERFAMILY SSF82607 10 102 2.09E-33 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily D172_011045 ff9b11527dcfac3ec45188a41842d431 108 PIRSF PIRSF004555 3 108 3.2E-37 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family D172_011045 ff9b11527dcfac3ec45188a41842d431 108 Gene3D G3DSA:3.30.1310.10 1 108 1.4E-42 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily D172_011045 ff9b11527dcfac3ec45188a41842d431 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 6.0E-35 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family D172_011045 ff9b11527dcfac3ec45188a41842d431 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 22.736 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family D172_011045 ff9b11527dcfac3ec45188a41842d431 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 99 1.7E-31 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family D172_004050 2189d3d6927df51c1b75483a4e977995 137 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 116 3.5E-24 T 14-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 D172_004050 2189d3d6927df51c1b75483a4e977995 137 SUPERFAMILY SSF51316 1 136 2.72E-39 T 14-10-2018 IPR011057 Mss4-like superfamily D172_004050 2189d3d6927df51c1b75483a4e977995 137 Gene3D G3DSA:2.170.150.70 3 119 6.0E-16 T 14-10-2018 D172_015050 6d8afaf3ead5293666be9e1731eaa5d6 150 Gene3D G3DSA:1.10.10.10 101 149 3.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_015050 6d8afaf3ead5293666be9e1731eaa5d6 150 Pfam PF02631 RecX family 31 148 2.4E-26 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 D172_015050 6d8afaf3ead5293666be9e1731eaa5d6 150 Gene3D G3DSA:1.10.10.10 56 100 1.2E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_015050 6d8afaf3ead5293666be9e1731eaa5d6 150 Hamap MF_01114 Regulatory protein RecX [recX]. 2 150 12.484 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 D172_007555 000f428139cd941a80accf4ecf37035c 318 Gene3D G3DSA:3.40.50.720 1 121 1.2E-38 T 14-10-2018 D172_007555 000f428139cd941a80accf4ecf37035c 318 Gene3D G3DSA:3.30.360.10 122 317 4.0E-45 T 14-10-2018 D172_007555 000f428139cd941a80accf4ecf37035c 318 SUPERFAMILY SSF51735 2 158 6.15E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_007555 000f428139cd941a80accf4ecf37035c 318 SUPERFAMILY SSF55347 128 289 2.94E-33 T 14-10-2018 D172_007555 000f428139cd941a80accf4ecf37035c 318 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 120 1.9E-24 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 D172_011140 aadb8fa1753bcecefe585dd115ae7f64 258 Pfam PF02698 DUF218 domain 84 230 1.8E-21 T 14-10-2018 IPR003848 Domain of unknown function DUF218 D172_007195 502f02a9e8feff6a394d8bcb988aaad2 179 PIRSF PIRSF006443 1 166 4.6E-63 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 D172_007195 502f02a9e8feff6a394d8bcb988aaad2 179 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 8 168 1.1E-80 T 14-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 D172_007195 502f02a9e8feff6a394d8bcb988aaad2 179 SUPERFAMILY SSF53218 7 168 1.44E-46 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily D172_007195 502f02a9e8feff6a394d8bcb988aaad2 179 SMART SM00852 14 158 1.4E-26 T 14-10-2018 IPR001453 MoaB/Mog domain D172_007195 502f02a9e8feff6a394d8bcb988aaad2 179 Gene3D G3DSA:3.40.980.10 2 172 1.4E-50 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily D172_007195 502f02a9e8feff6a394d8bcb988aaad2 179 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 2.1E-35 T 14-10-2018 IPR001453 MoaB/Mog domain D172_007195 502f02a9e8feff6a394d8bcb988aaad2 179 Pfam PF00994 Probable molybdopterin binding domain 14 155 1.3E-32 T 14-10-2018 IPR001453 MoaB/Mog domain D172_003405 6fc58070d74ac8706fb166217a0a9c1e 150 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain D172_003405 6fc58070d74ac8706fb166217a0a9c1e 150 SUPERFAMILY SSF55804 1 147 3.27E-37 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 D172_003405 6fc58070d74ac8706fb166217a0a9c1e 150 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 15 147 4.8E-36 T 14-10-2018 IPR002178 PTS EIIA type-2 domain D172_003405 6fc58070d74ac8706fb166217a0a9c1e 150 Gene3D G3DSA:3.40.930.10 1 150 4.8E-50 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 D172_003405 6fc58070d74ac8706fb166217a0a9c1e 150 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 148 3.1E-43 T 14-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 D172_015925 1ea05b0fa193a6c431a4a3ba7aa7b9d1 626 SMART SM01358 32 274 1.2E-23 T 14-10-2018 IPR032255 Helical bimodular sensor domain D172_015925 1ea05b0fa193a6c431a4a3ba7aa7b9d1 626 Gene3D G3DSA:1.10.287.950 295 626 1.2E-73 T 14-10-2018 D172_015925 1ea05b0fa193a6c431a4a3ba7aa7b9d1 626 SMART SM00283 364 625 2.3E-75 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_015925 1ea05b0fa193a6c431a4a3ba7aa7b9d1 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 592 5.5E-45 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 D172_015925 1ea05b0fa193a6c431a4a3ba7aa7b9d1 626 SUPERFAMILY SSF58104 317 626 2.35E-76 T 14-10-2018 D172_001245 d108d1b644aedc831d6e15e2bf65e5a9 469 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 456 38.116 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 D172_001245 d108d1b644aedc831d6e15e2bf65e5a9 469 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 4 438 9.2E-111 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 D172_020185 bcce20137c30e6bcdebcd8b29672cb08 269 Pfam PF03618 Kinase/pyrophosphorylase 5 259 1.5E-71 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 D172_020185 bcce20137c30e6bcdebcd8b29672cb08 269 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 1 268 72.067 T 14-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein D172_019160 0cb7f94185ceed783607b06b5f220a0c 302 Pfam PF14022 Protein of unknown function (DUF4238) 9 109 2.2E-8 T 14-10-2018 IPR025332 Protein of unknown function DUF4238 D172_019480 7914d33e91c37bc36b532f264be83e06 314 SUPERFAMILY SSF63829 19 276 1.44E-5 T 14-10-2018 D172_003900 a858c469cb7b87d99f4468c39bdef295 225 SUPERFAMILY SSF52833 1 77 9.49E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_003900 a858c469cb7b87d99f4468c39bdef295 225 Pfam PF00043 Glutathione S-transferase, C-terminal domain 121 191 5.0E-11 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal D172_003900 a858c469cb7b87d99f4468c39bdef295 225 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 73 8.7E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 D172_003900 a858c469cb7b87d99f4468c39bdef295 225 Gene3D G3DSA:1.20.1050.10 83 221 2.0E-42 T 14-10-2018 D172_003900 a858c469cb7b87d99f4468c39bdef295 225 SUPERFAMILY SSF47616 84 197 7.37E-33 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily D172_003900 a858c469cb7b87d99f4468c39bdef295 225 Gene3D G3DSA:3.40.30.10 1 82 3.3E-29 T 14-10-2018 D172_017810 0b7acdae7f7056fc5a968ff4b3f4ed11 198 Pfam PF06271 RDD family 59 191 2.4E-19 T 14-10-2018 IPR010432 RDD D172_002850 8df82e93402fa501203368b8c9dc7e6c 94 Pfam PF12305 Protein of unknown function (DUF3630) 1 89 2.9E-24 T 14-10-2018 IPR022080 Protein of unknown function DUF3630 D172_010990 a04d7ea95e09ccd1237b661db5462b64 427 SUPERFAMILY SSF53300 252 413 9.27E-7 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily D172_010990 a04d7ea95e09ccd1237b661db5462b64 427 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 39.1 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 D172_010990 a04d7ea95e09ccd1237b661db5462b64 427 Pfam PF04285 Protein of unknown function (DUF444) 3 419 1.7E-183 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 D172_004985 cd6cf83aeacfd511784ec3e25a12bde8 191 Gene3D G3DSA:3.40.630.30 2 191 1.3E-38 T 14-10-2018 D172_004985 cd6cf83aeacfd511784ec3e25a12bde8 191 Pfam PF13302 Acetyltransferase (GNAT) domain 12 150 3.8E-19 T 14-10-2018 IPR000182 GNAT domain D172_004985 cd6cf83aeacfd511784ec3e25a12bde8 191 SUPERFAMILY SSF55729 3 176 5.82E-32 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_014045 b7e014c2ec79582802c4acb2c6dbf4ad 196 Gene3D G3DSA:1.20.1590.10 2 196 1.4E-61 T 14-10-2018 IPR023381 YP001051499.1-like domain superfamily D172_014045 b7e014c2ec79582802c4acb2c6dbf4ad 196 Pfam PF04222 Protein of unknown function (DUF416) 7 194 4.1E-59 T 14-10-2018 IPR007338 Protein of unknown function DUF416 D172_003920 cf2cb919da1ad122bd2cbe8b59f03880 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 2.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003920 cf2cb919da1ad122bd2cbe8b59f03880 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 2.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003920 cf2cb919da1ad122bd2cbe8b59f03880 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 2.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003920 cf2cb919da1ad122bd2cbe8b59f03880 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 2.6E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003920 cf2cb919da1ad122bd2cbe8b59f03880 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 3.1E-36 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003920 cf2cb919da1ad122bd2cbe8b59f03880 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003920 cf2cb919da1ad122bd2cbe8b59f03880 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.898 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003920 cf2cb919da1ad122bd2cbe8b59f03880 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003920 cf2cb919da1ad122bd2cbe8b59f03880 75 Pfam PF01084 Ribosomal protein S18 19 68 6.9E-25 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003920 cf2cb919da1ad122bd2cbe8b59f03880 75 SUPERFAMILY SSF46911 3 71 1.31E-28 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_003920 cf2cb919da1ad122bd2cbe8b59f03880 75 Gene3D G3DSA:4.10.640.10 20 75 9.1E-28 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_005270 a2eec6a162dc97044a3b243468b69f2e 711 Gene3D G3DSA:1.10.1370.10 181 641 9.9E-243 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 D172_005270 a2eec6a162dc97044a3b243468b69f2e 711 SUPERFAMILY SSF55486 45 708 3.39E-176 T 14-10-2018 D172_005270 a2eec6a162dc97044a3b243468b69f2e 711 Gene3D G3DSA:1.10.1370.40 72 703 9.9E-243 T 14-10-2018 D172_005270 a2eec6a162dc97044a3b243468b69f2e 711 Pfam PF01432 Peptidase family M3 264 708 5.7E-129 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 D172_019320 c7651ec4f8c135c8d4fbaee517cf204c 121 PIRSF PIRSF030962 3 118 1.0E-25 T 14-10-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 D172_019320 c7651ec4f8c135c8d4fbaee517cf204c 121 Gene3D G3DSA:3.10.129.10 5 121 7.7E-28 T 14-10-2018 D172_019320 c7651ec4f8c135c8d4fbaee517cf204c 121 SUPERFAMILY SSF54637 22 100 1.74E-9 T 14-10-2018 IPR029069 HotDog domain superfamily D172_012550 401632b35509cd4ca4717e087e6e98cd 298 Gene3D G3DSA:3.30.70.270 132 298 9.0E-49 T 14-10-2018 D172_012550 401632b35509cd4ca4717e087e6e98cd 298 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 139 295 6.5E-46 T 14-10-2018 IPR000160 GGDEF domain D172_012550 401632b35509cd4ca4717e087e6e98cd 298 Pfam PF00990 Diguanylate cyclase, GGDEF domain 142 293 1.9E-41 T 14-10-2018 IPR000160 GGDEF domain D172_012550 401632b35509cd4ca4717e087e6e98cd 298 SMART SM00267 130 298 1.8E-43 T 14-10-2018 IPR000160 GGDEF domain D172_012550 401632b35509cd4ca4717e087e6e98cd 298 SUPERFAMILY SSF55073 146 295 3.77E-41 T 14-10-2018 IPR029787 Nucleotide cyclase D172_003295 1e7ab10f09d39f1ea5596399f12f4602 235 Pfam PF04893 Yip1 domain 13 227 6.8E-18 T 14-10-2018 IPR006977 Yip1 domain GO:0016020 D172_014295 f24a0be7ed3b2913f19514740783a1e9 255 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 184 201 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site D172_014295 f24a0be7ed3b2913f19514740783a1e9 255 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 214 1.4E-22 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel D172_015935 cf7f6bb7e131f7e9fcbd1b616c029d57 174 SMART SM00014 59 168 3.9E-14 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase D172_015935 cf7f6bb7e131f7e9fcbd1b616c029d57 174 SUPERFAMILY SSF48317 6 171 9.81E-39 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily D172_015935 cf7f6bb7e131f7e9fcbd1b616c029d57 174 Gene3D G3DSA:1.20.144.10 66 169 1.8E-19 T 14-10-2018 D172_015935 cf7f6bb7e131f7e9fcbd1b616c029d57 174 Pfam PF01569 PAP2 superfamily 64 171 2.1E-19 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase D172_008790 78bd60fc19727b6fe44a945422e856e5 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 288 2.2E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D172_008790 78bd60fc19727b6fe44a945422e856e5 290 SUPERFAMILY SSF161098 55 278 5.1E-48 T 14-10-2018 IPR035906 MetI-like superfamily D172_008790 78bd60fc19727b6fe44a945422e856e5 290 Gene3D G3DSA:1.10.3720.10 49 287 3.1E-53 T 14-10-2018 IPR035906 MetI-like superfamily D172_008790 78bd60fc19727b6fe44a945422e856e5 290 SUPERFAMILY SSF160964 4 41 3.92E-5 T 14-10-2018 D172_003800 170095124b99ac39565126a24e31902c 503 Pfam PF13175 AAA ATPase domain 27 391 7.0E-18 T 14-10-2018 D172_003800 170095124b99ac39565126a24e31902c 503 Gene3D G3DSA:3.40.50.300 2 126 6.0E-6 T 14-10-2018 D172_003800 170095124b99ac39565126a24e31902c 503 Gene3D G3DSA:3.40.50.300 215 428 2.9E-11 T 14-10-2018 D172_003800 170095124b99ac39565126a24e31902c 503 SUPERFAMILY SSF52540 1 408 2.78E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_010645 582f3439422647d188a4923515392c99 201 SMART SM01252 8 108 2.7E-23 T 14-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding D172_010645 582f3439422647d188a4923515392c99 201 Pfam PF04383 KilA-N domain 10 106 5.8E-19 T 14-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding D172_020925 af3da6ed7b21efc7496b3e65171868ed 168 Gene3D G3DSA:3.40.630.30 1 166 5.9E-40 T 14-10-2018 D172_020925 af3da6ed7b21efc7496b3e65171868ed 168 SUPERFAMILY SSF55729 2 165 8.8E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_020925 af3da6ed7b21efc7496b3e65171868ed 168 Pfam PF13302 Acetyltransferase (GNAT) domain 2 141 3.5E-22 T 14-10-2018 IPR000182 GNAT domain D172_015170 6c98bdeeccc8a157f9f333a3cbef1e84 139 Pfam PF01152 Bacterial-like globin 24 134 1.1E-12 T 14-10-2018 IPR001486 Truncated hemoglobin GO:0019825 D172_015170 6c98bdeeccc8a157f9f333a3cbef1e84 139 SUPERFAMILY SSF46458 24 137 1.01E-26 T 14-10-2018 IPR009050 Globin-like superfamily D172_015170 6c98bdeeccc8a157f9f333a3cbef1e84 139 Gene3D G3DSA:1.10.490.10 12 139 1.7E-31 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 D172_008775 e6b4664cd7af5e1126789c160f19e9f9 319 Pfam PF04198 Putative sugar-binding domain 62 317 9.7E-70 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 D172_008775 e6b4664cd7af5e1126789c160f19e9f9 319 Gene3D G3DSA:1.10.10.10 2 59 2.4E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_008775 e6b4664cd7af5e1126789c160f19e9f9 319 Gene3D G3DSA:3.40.50.1360 60 319 3.4E-64 T 14-10-2018 D172_008775 e6b4664cd7af5e1126789c160f19e9f9 319 SUPERFAMILY SSF100950 62 317 1.0E-63 T 14-10-2018 IPR037171 NagB/RpiA transferase-like D172_004405 925edb91081658a137f8766dce643803 318 Pfam PF02219 Methylenetetrahydrofolate reductase 165 259 5.3E-5 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 D172_004405 925edb91081658a137f8766dce643803 318 Gene3D G3DSA:3.20.20.220 3 314 6.4E-105 T 14-10-2018 D172_004405 925edb91081658a137f8766dce643803 318 SUPERFAMILY SSF51730 6 272 1.31E-25 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like D172_013105 f09c8991f2b12452ff7ef349d21c2b2d 523 Gene3D G3DSA:1.20.1530.20 2 361 9.3E-52 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily D172_013105 f09c8991f2b12452ff7ef349d21c2b2d 523 SUPERFAMILY SSF51735 388 517 4.57E-17 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_013105 f09c8991f2b12452ff7ef349d21c2b2d 523 Gene3D G3DSA:3.40.50.720 381 522 7.4E-31 T 14-10-2018 D172_013105 f09c8991f2b12452ff7ef349d21c2b2d 523 Pfam PF00999 Sodium/hydrogen exchanger family 5 349 4.8E-42 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 D172_013105 f09c8991f2b12452ff7ef349d21c2b2d 523 Pfam PF02254 TrkA-N domain 389 502 7.5E-20 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 D172_016905 c8fd338140e2fd5bb20be83c743bae75 493 PIRSF PIRSF006429 1 493 3.2E-165 T 14-10-2018 IPR024188 Glutamate synthase large subunit-like protein D172_016905 c8fd338140e2fd5bb20be83c743bae75 493 PIRSF PIRSF500060 1 493 3.5E-207 T 14-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria D172_016905 c8fd338140e2fd5bb20be83c743bae75 493 SUPERFAMILY SSF51395 11 479 6.72E-130 T 14-10-2018 D172_016905 c8fd338140e2fd5bb20be83c743bae75 493 Pfam PF01645 Conserved region in glutamate synthase 140 456 1.0E-85 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 D172_016905 c8fd338140e2fd5bb20be83c743bae75 493 Gene3D G3DSA:3.20.20.70 130 488 7.2E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_014540 9079c4810dc5bebfbe0729c592fdc8bd 253 Pfam PF10670 Domain of unknown function (DUF4198) 10 229 4.8E-40 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 D172_012370 fcd36accc135f39d96f11e5f573a8fb8 505 Pfam PF00361 Proton-conducting membrane transporter 128 415 1.9E-39 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_012370 fcd36accc135f39d96f11e5f573a8fb8 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 236 260 3.6E-13 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_012370 fcd36accc135f39d96f11e5f573a8fb8 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 3.6E-13 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_012370 fcd36accc135f39d96f11e5f573a8fb8 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 381 407 3.6E-13 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_012370 fcd36accc135f39d96f11e5f573a8fb8 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 3.6E-13 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_012370 fcd36accc135f39d96f11e5f573a8fb8 505 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 328 347 3.6E-13 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_016145 3c223b3b8047635470800df5706d02d9 292 Pfam PF01963 TraB family 28 291 1.9E-65 T 14-10-2018 IPR002816 Pheromone shutdown, TraB D172_000365 b2daf7d349ac7d9775856d4110066d09 417 SUPERFAMILY SSF111369 66 285 1.44E-5 T 14-10-2018 D172_000365 b2daf7d349ac7d9775856d4110066d09 417 Gene3D G3DSA:2.40.50.100 74 269 1.4E-38 T 14-10-2018 D172_000365 b2daf7d349ac7d9775856d4110066d09 417 Gene3D G3DSA:2.40.30.170 63 341 1.4E-38 T 14-10-2018 D172_000365 b2daf7d349ac7d9775856d4110066d09 417 Gene3D G3DSA:1.10.287.470 108 235 1.4E-38 T 14-10-2018 D172_000365 b2daf7d349ac7d9775856d4110066d09 417 Pfam PF13437 HlyD family secretion protein 236 325 2.3E-10 T 14-10-2018 D172_000365 b2daf7d349ac7d9775856d4110066d09 417 Gene3D G3DSA:2.40.420.20 60 402 1.4E-38 T 14-10-2018 D172_000365 b2daf7d349ac7d9775856d4110066d09 417 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 205 410 1.3E-29 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 D172_008275 1929d324115475b5d29c914dc1daa73d 168 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 22 163 7.5E-48 T 14-10-2018 IPR018639 Domain of unknown function DUF2062 D172_020430 12151cbfb70303b831da4f9e1b6b6947 533 Pfam PF03929 PepSY-associated TM region 11 374 4.7E-62 T 14-10-2018 IPR005625 PepSY-associated TM protein D172_014480 745d26d6f34d3ee2ff2f88ac91bab0ff 240 Pfam PF04402 Protein of unknown function (DUF541) 28 235 2.1E-28 T 14-10-2018 IPR007497 Protein of unknown function DUF541 D172_014480 745d26d6f34d3ee2ff2f88ac91bab0ff 240 Gene3D G3DSA:3.30.110.170 30 235 2.3E-28 T 14-10-2018 D172_014480 745d26d6f34d3ee2ff2f88ac91bab0ff 240 Gene3D G3DSA:3.30.70.2970 40 148 2.3E-28 T 14-10-2018 D172_014895 4ae143d22130968f62c5cee9cb3f2064 299 Gene3D G3DSA:3.40.50.300 1 289 1.5E-114 T 14-10-2018 D172_014895 4ae143d22130968f62c5cee9cb3f2064 299 SUPERFAMILY SSF52540 4 286 8.79E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_014895 4ae143d22130968f62c5cee9cb3f2064 299 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 D172_014895 4ae143d22130968f62c5cee9cb3f2064 299 PRINTS PR00478 Phosphoribulokinase family signature 12 29 2.7E-28 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 D172_014895 4ae143d22130968f62c5cee9cb3f2064 299 PRINTS PR00478 Phosphoribulokinase family signature 126 144 2.7E-28 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 D172_014895 4ae143d22130968f62c5cee9cb3f2064 299 PRINTS PR00478 Phosphoribulokinase family signature 182 205 2.7E-28 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 D172_014895 4ae143d22130968f62c5cee9cb3f2064 299 PRINTS PR00478 Phosphoribulokinase family signature 164 181 2.7E-28 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 D172_014895 4ae143d22130968f62c5cee9cb3f2064 299 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 5.1E-71 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 D172_016005 0d2c433474d7e41a3715484120ef0abe 449 Pfam PF01523 Putative modulator of DNA gyrase 35 326 2.1E-56 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 D172_016005 0d2c433474d7e41a3715484120ef0abe 449 SUPERFAMILY SSF111283 15 448 4.71E-125 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 D172_016005 0d2c433474d7e41a3715484120ef0abe 449 Gene3D G3DSA:3.30.2290.10 6 235 2.0E-81 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal D172_012450 e2e1bf47b66e29404cfe8c0e43a034c6 387 Pfam PF13145 PPIC-type PPIASE domain 236 341 2.2E-8 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 D172_020110 2d924fcc66ff7b619a34d16cf37771cc 138 Pfam PF10734 Protein of unknown function (DUF2523) 58 136 2.5E-7 T 14-10-2018 IPR019670 Protein of unkown function DUF2523 D172_000380 d1dcb3a0c7a7cd3b7aaf3d6210fc9140 804 Pfam PF02687 FtsX-like permease family 306 392 2.4E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 D172_000380 d1dcb3a0c7a7cd3b7aaf3d6210fc9140 804 Pfam PF12704 MacB-like periplasmic core domain 20 232 3.7E-9 T 14-10-2018 IPR025857 MacB-like periplasmic core domain D172_002200 6c71c16a1abc6f7010b02843d699862f 328 PIRSF PIRSF003097 26 322 8.4E-73 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 D172_019055 cbae2823b709999aaa233d8840cec397 489 Pfam PF00939 Sodium:sulfate symporter transmembrane region 26 481 1.1E-82 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 D172_019055 cbae2823b709999aaa233d8840cec397 489 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 39 481 1.1E-90 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 D172_019055 cbae2823b709999aaa233d8840cec397 489 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 433 449 - T 14-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 D172_002490 64be934d6ca87764f216468b8f05f174 399 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 35 390 6.8E-104 T 14-10-2018 D172_002490 64be934d6ca87764f216468b8f05f174 399 SUPERFAMILY SSF48208 8 399 3.84E-123 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 D172_002490 64be934d6ca87764f216468b8f05f174 399 Gene3D G3DSA:1.50.10.10 5 399 6.2E-144 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 D172_010515 e2e087df11b00b512e8d749e76410ac9 191 Pfam PF12571 Phage tail-collar fibre protein 1 150 2.6E-26 T 14-10-2018 IPR022225 Phage tail fibre protein D172_003605 2933687a3dd1a2308d7887757ab41adf 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 21 374 1.1E-155 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 D172_003605 2933687a3dd1a2308d7887757ab41adf 376 PIRSF PIRSF015658 1 376 1.9E-171 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 D172_003605 2933687a3dd1a2308d7887757ab41adf 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 21 370 5.9E-167 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 D172_016935 ac4ba0300d678a78fded6029556bc3bb 82 Pfam PF02416 mttA/Hcf106 family 6 55 2.2E-13 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 D172_016935 ac4ba0300d678a78fded6029556bc3bb 82 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 3 82 24.093 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 D172_016935 ac4ba0300d678a78fded6029556bc3bb 82 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 50 9.7E-21 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 D172_010250 34aae2a6ad64ec05df0e1809c6db7683 442 Gene3D G3DSA:1.20.1250.20 8 420 6.9E-28 T 14-10-2018 D172_010250 34aae2a6ad64ec05df0e1809c6db7683 442 Pfam PF13347 MFS/sugar transport protein 9 426 3.3E-107 T 14-10-2018 D172_010250 34aae2a6ad64ec05df0e1809c6db7683 442 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 7 440 8.7E-130 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 D172_010250 34aae2a6ad64ec05df0e1809c6db7683 442 SUPERFAMILY SSF103473 8 422 6.02E-39 T 14-10-2018 IPR036259 MFS transporter superfamily D172_002970 6093d37aa98c0ec36e468bd760c5dd1b 173 Pfam PF00258 Flavodoxin 5 161 2.1E-24 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 D172_002970 6093d37aa98c0ec36e468bd760c5dd1b 173 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 D172_002970 6093d37aa98c0ec36e468bd760c5dd1b 173 Gene3D G3DSA:3.40.50.360 1 172 8.0E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_002970 6093d37aa98c0ec36e468bd760c5dd1b 173 PIRSF PIRSF038996 1 172 5.6E-52 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 D172_002970 6093d37aa98c0ec36e468bd760c5dd1b 173 SUPERFAMILY SSF52218 1 170 1.71E-43 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_002970 6093d37aa98c0ec36e468bd760c5dd1b 173 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 1.1E-59 T 14-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 D172_007240 51aedbd9855e99cd995e41fb9d816534 420 Pfam PF08376 Nitrate and nitrite sensing 38 283 2.3E-45 T 14-10-2018 IPR013587 Nitrate/nitrite sensing protein D172_007240 51aedbd9855e99cd995e41fb9d816534 420 Pfam PF03861 ANTAR domain 369 416 6.1E-14 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 D172_007240 51aedbd9855e99cd995e41fb9d816534 420 SMART SM01012 361 416 5.6E-14 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 D172_007240 51aedbd9855e99cd995e41fb9d816534 420 SUPERFAMILY SSF52172 347 416 1.49E-11 T 14-10-2018 IPR011006 CheY-like superfamily D172_007240 51aedbd9855e99cd995e41fb9d816534 420 Gene3D G3DSA:1.10.10.10 364 420 2.0E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_020550 7d207fcb2532b1c985d1f6d860dc25f1 445 PRINTS PR00095 Anthranilate synthase component I signature 374 388 6.7E-5 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_020550 7d207fcb2532b1c985d1f6d860dc25f1 445 PRINTS PR00095 Anthranilate synthase component I signature 280 293 6.7E-5 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_020550 7d207fcb2532b1c985d1f6d860dc25f1 445 PRINTS PR00095 Anthranilate synthase component I signature 389 403 6.7E-5 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 D172_020550 7d207fcb2532b1c985d1f6d860dc25f1 445 TIGRFAM TIGR03494 salicyl_syn: salicylate synthase 24 441 2.0E-118 T 14-10-2018 IPR019996 Salicylate synthase GO:0008909|GO:0016833 KEGG: 00130+5.4.4.2|KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 D172_020550 7d207fcb2532b1c985d1f6d860dc25f1 445 Pfam PF00425 chorismate binding enzyme 180 432 2.8E-64 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal D172_020550 7d207fcb2532b1c985d1f6d860dc25f1 445 SUPERFAMILY SSF56322 21 437 7.59E-85 T 14-10-2018 IPR005801 ADC synthase GO:0009058 D172_020550 7d207fcb2532b1c985d1f6d860dc25f1 445 Gene3D G3DSA:3.60.120.10 3 444 2.1E-114 T 14-10-2018 IPR005801 ADC synthase GO:0009058 D172_000570 583cd53640fc86de85119686302ba6f4 835 Pfam PF16313 Met-zincin 441 761 8.6E-78 T 14-10-2018 IPR032534 Domain of unknown function DUF4953 D172_000570 583cd53640fc86de85119686302ba6f4 835 Gene3D G3DSA:3.40.390.10 280 530 4.9E-7 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 D172_000570 583cd53640fc86de85119686302ba6f4 835 Pfam PF17148 Domain of unknown function (DUF5117) 92 283 1.2E-25 T 14-10-2018 IPR033413 Domain of unknown function DUF5117 D172_000570 583cd53640fc86de85119686302ba6f4 835 SUPERFAMILY SSF55486 224 528 5.57E-22 T 14-10-2018 D172_013000 4fb1d241fd8ed81b8ac292086929c070 381 SUPERFAMILY SSF56935 18 381 2.35E-34 T 14-10-2018 D172_013000 4fb1d241fd8ed81b8ac292086929c070 381 Pfam PF13609 Gram-negative porin 7 364 9.3E-11 T 14-10-2018 D172_013000 4fb1d241fd8ed81b8ac292086929c070 381 Gene3D G3DSA:2.40.160.10 18 381 2.2E-9 T 14-10-2018 IPR023614 Porin domain superfamily D172_001485 5db5cea6da67170f808e607a4f7f3190 304 SUPERFAMILY SSF103481 182 281 3.92E-14 T 14-10-2018 D172_001485 5db5cea6da67170f808e607a4f7f3190 304 SUPERFAMILY SSF103481 50 139 3.27E-16 T 14-10-2018 D172_001485 5db5cea6da67170f808e607a4f7f3190 304 Pfam PF00892 EamA-like transporter family 8 136 1.6E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_001485 5db5cea6da67170f808e607a4f7f3190 304 Pfam PF00892 EamA-like transporter family 147 280 1.9E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_017995 85311939b8cd9590a01b24c26f4e6d50 489 Pfam PF02554 Carbon starvation protein CstA 2 144 8.1E-30 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 D172_017995 85311939b8cd9590a01b24c26f4e6d50 489 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 336 444 9.9E-17 T 14-10-2018 IPR025299 CstA, C-terminal domain D172_009355 c7aa2074b2115d7537c5a6636740020c 711 Gene3D G3DSA:1.10.1130.10 135 344 4.0E-13 T 14-10-2018 D172_009355 c7aa2074b2115d7537c5a6636740020c 711 Gene3D G3DSA:1.10.1130.10 345 420 3.0E-5 T 14-10-2018 D172_009355 c7aa2074b2115d7537c5a6636740020c 711 SUPERFAMILY SSF48452 554 709 8.68E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_009355 c7aa2074b2115d7537c5a6636740020c 711 Gene3D G3DSA:1.25.40.10 539 711 1.0E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_009355 c7aa2074b2115d7537c5a6636740020c 711 SUPERFAMILY SSF48695 23 414 5.55E-58 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily D172_009355 c7aa2074b2115d7537c5a6636740020c 711 Pfam PF13435 Cytochrome c554 and c-prime 192 253 0.0082 T 14-10-2018 IPR023155 Cytochrome c-552/4 D172_009355 c7aa2074b2115d7537c5a6636740020c 711 Pfam PF13435 Cytochrome c554 and c-prime 26 52 7.5E-4 T 14-10-2018 IPR023155 Cytochrome c-552/4 D172_009355 c7aa2074b2115d7537c5a6636740020c 711 Pfam PF13181 Tetratricopeptide repeat 585 610 0.085 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 D172_000875 2c9a5eec1786f07a1d4f8ea76516afed 425 Gene3D G3DSA:3.40.50.300 228 411 8.2E-49 T 14-10-2018 D172_000875 2c9a5eec1786f07a1d4f8ea76516afed 425 Pfam PF00270 DEAD/DEAH box helicase 33 204 1.9E-44 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 D172_000875 2c9a5eec1786f07a1d4f8ea76516afed 425 SUPERFAMILY SSF52540 81 362 6.89E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_000875 2c9a5eec1786f07a1d4f8ea76516afed 425 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 160 168 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site D172_000875 2c9a5eec1786f07a1d4f8ea76516afed 425 SMART SM00487 28 231 7.7E-52 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain D172_000875 2c9a5eec1786f07a1d4f8ea76516afed 425 Pfam PF00271 Helicase conserved C-terminal domain 239 348 9.9E-31 T 14-10-2018 IPR001650 Helicase, C-terminal D172_000875 2c9a5eec1786f07a1d4f8ea76516afed 425 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 386 49.617 T 14-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 D172_000875 2c9a5eec1786f07a1d4f8ea76516afed 425 SMART SM00490 267 348 4.8E-33 T 14-10-2018 IPR001650 Helicase, C-terminal D172_000875 2c9a5eec1786f07a1d4f8ea76516afed 425 Gene3D G3DSA:3.40.50.300 2 219 6.8E-70 T 14-10-2018 D172_003770 2a6b3f18dbec74553561b63db10cd24d 281 Gene3D G3DSA:1.10.10.10 1 86 1.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_003770 2a6b3f18dbec74553561b63db10cd24d 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 1.1E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_003770 2a6b3f18dbec74553561b63db10cd24d 281 Gene3D G3DSA:3.40.190.10 96 261 1.2E-41 T 14-10-2018 D172_003770 2a6b3f18dbec74553561b63db10cd24d 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_003770 2a6b3f18dbec74553561b63db10cd24d 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_003770 2a6b3f18dbec74553561b63db10cd24d 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.6E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_003770 2a6b3f18dbec74553561b63db10cd24d 281 Pfam PF03466 LysR substrate binding domain 88 277 9.3E-27 T 14-10-2018 IPR005119 LysR, substrate-binding D172_003770 2a6b3f18dbec74553561b63db10cd24d 281 SUPERFAMILY SSF53850 89 277 1.86E-24 T 14-10-2018 D172_003770 2a6b3f18dbec74553561b63db10cd24d 281 SUPERFAMILY SSF46785 5 112 1.03E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_003770 2a6b3f18dbec74553561b63db10cd24d 281 Gene3D G3DSA:3.40.190.10 163 254 1.2E-41 T 14-10-2018 D172_018815 a7afb5307dd9067602cece559ff0fa09 161 Gene3D G3DSA:1.25.40.20 51 161 4.7E-7 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily D172_018815 a7afb5307dd9067602cece559ff0fa09 161 SUPERFAMILY SSF48403 63 138 5.59E-8 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily D172_009890 f2bdcf58d177aeed9fd663c176529958 809 Pfam PF12262 Bacterial virulence factor lipase N-terminal 37 272 6.7E-24 T 14-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain D172_009890 f2bdcf58d177aeed9fd663c176529958 809 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 793 4.3E-278 T 14-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family D172_009890 f2bdcf58d177aeed9fd663c176529958 809 Gene3D G3DSA:3.40.50.1820 418 623 7.9E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_009890 f2bdcf58d177aeed9fd663c176529958 809 SUPERFAMILY SSF53474 400 583 8.11E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_014890 fd470334ab7cb0f7194a8ceb9327a27c 291 Gene3D G3DSA:2.120.10.30 20 262 1.5E-5 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_014890 fd470334ab7cb0f7194a8ceb9327a27c 291 SUPERFAMILY SSF82171 28 262 3.92E-7 T 14-10-2018 D172_011360 86a0c292c16816c61a1f79921e6e0ed4 456 Pfam PF07670 Nucleoside recognition 140 235 8.5E-9 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 D172_000220 6626f81752878499db537914d244ab0e 261 Gene3D G3DSA:3.40.50.300 1 260 4.6E-77 T 14-10-2018 D172_000220 6626f81752878499db537914d244ab0e 261 SUPERFAMILY SSF52540 2 254 4.55E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_000220 6626f81752878499db537914d244ab0e 261 PIRSF PIRSF009320 90 255 8.3E-8 T 14-10-2018 D172_000220 6626f81752878499db537914d244ab0e 261 PIRSF PIRSF009320 2 100 1.1E-15 T 14-10-2018 D172_000220 6626f81752878499db537914d244ab0e 261 Pfam PF13614 AAA domain 3 178 3.4E-62 T 14-10-2018 IPR025669 AAA domain D172_001435 9accd10d04286996ffba93ec128a4cf4 137 Gene3D G3DSA:3.30.300.20 35 134 1.5E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta D172_001435 9accd10d04286996ffba93ec128a4cf4 137 Pfam PF02566 OsmC-like protein 30 127 2.3E-19 T 14-10-2018 IPR003718 OsmC/Ohr family D172_001435 9accd10d04286996ffba93ec128a4cf4 137 Gene3D G3DSA:2.20.25.10 1 34 2.4E-17 T 14-10-2018 D172_001435 9accd10d04286996ffba93ec128a4cf4 137 SUPERFAMILY SSF82784 1 132 5.1E-40 T 14-10-2018 IPR036102 OsmC/Ohr superfamily D172_009350 e2dc6be2b3ad45c32b1407b2a5b99d0c 623 Gene3D G3DSA:3.40.720.10 35 585 1.3E-84 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D172_009350 e2dc6be2b3ad45c32b1407b2a5b99d0c 623 Pfam PF00884 Sulfatase 35 464 8.4E-34 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 D172_009350 e2dc6be2b3ad45c32b1407b2a5b99d0c 623 SUPERFAMILY SSF53649 33 580 4.88E-70 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D172_008805 8be308dfe9a310ff116e8ed997abe28a 127 Pfam PF00072 Response regulator receiver domain 10 117 1.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_008805 8be308dfe9a310ff116e8ed997abe28a 127 Gene3D G3DSA:3.40.50.2300 9 126 2.6E-24 T 14-10-2018 D172_008805 8be308dfe9a310ff116e8ed997abe28a 127 SMART SM00448 8 120 7.1E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_008805 8be308dfe9a310ff116e8ed997abe28a 127 SUPERFAMILY SSF52172 10 123 1.25E-24 T 14-10-2018 IPR011006 CheY-like superfamily D172_010780 7ea981b390197a89cbaa7cd74a447ccc 617 SUPERFAMILY SSF56935 51 617 4.03E-41 T 14-10-2018 D172_010780 7ea981b390197a89cbaa7cd74a447ccc 617 Gene3D G3DSA:2.40.170.20 146 617 6.3E-24 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_013320 d38516471c65c7e419e1fe6235c34bed 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 108 217 4.8E-22 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel D172_000440 b7f6e1e50078648fda027cd51e18a232 132 Pfam PF03203 MerC mercury resistance protein 9 117 2.2E-28 T 14-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 D172_002175 8784f600a8d6a1a3e9532ef5045bc056 148 Gene3D G3DSA:1.10.1510.10 1 90 2.7E-24 T 14-10-2018 D172_002175 8784f600a8d6a1a3e9532ef5045bc056 148 Pfam PF09424 Yqey-like protein 7 146 2.9E-52 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 D172_002175 8784f600a8d6a1a3e9532ef5045bc056 148 Gene3D G3DSA:1.10.10.410 91 147 9.9E-20 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal D172_002175 8784f600a8d6a1a3e9532ef5045bc056 148 SUPERFAMILY SSF89095 1 146 4.66E-42 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 D172_004190 f4301cafb41ba36209cca0889e8f265e 566 Gene3D G3DSA:1.20.120.1470 161 283 2.3E-5 T 14-10-2018 D172_004190 f4301cafb41ba36209cca0889e8f265e 566 Pfam PF03571 Peptidase family M49 187 397 4.6E-15 T 14-10-2018 IPR039461 Peptidase family M49 D172_020395 9b5ed4c1e590ccb27645f84cf16ec508 273 Pfam PF00106 short chain dehydrogenase 6 198 1.4E-47 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020395 9b5ed4c1e590ccb27645f84cf16ec508 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020395 9b5ed4c1e590ccb27645f84cf16ec508 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020395 9b5ed4c1e590ccb27645f84cf16ec508 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020395 9b5ed4c1e590ccb27645f84cf16ec508 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020395 9b5ed4c1e590ccb27645f84cf16ec508 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.0E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020395 9b5ed4c1e590ccb27645f84cf16ec508 273 Gene3D G3DSA:3.40.50.720 3 265 9.3E-63 T 14-10-2018 D172_020395 9b5ed4c1e590ccb27645f84cf16ec508 273 SUPERFAMILY SSF51735 4 229 5.0E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_020395 9b5ed4c1e590ccb27645f84cf16ec508 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020395 9b5ed4c1e590ccb27645f84cf16ec508 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_020395 9b5ed4c1e590ccb27645f84cf16ec508 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_003315 10a922195fbcb7a9b218e960d33d8f27 92 Gene3D G3DSA:1.10.10.60 8 91 1.0E-7 T 14-10-2018 D172_003315 10a922195fbcb7a9b218e960d33d8f27 92 Pfam PF01527 Transposase 2 74 5.0E-16 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 D172_003315 10a922195fbcb7a9b218e960d33d8f27 92 SUPERFAMILY SSF46689 3 89 1.79E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 D172_020060 72da59f80c7d31663feada200c35d42c 356 Gene3D G3DSA:3.40.50.720 136 304 1.9E-121 T 14-10-2018 D172_020060 72da59f80c7d31663feada200c35d42c 356 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 21 320 2.1E-100 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 D172_020060 72da59f80c7d31663feada200c35d42c 356 Gene3D G3DSA:3.30.1780.10 27 342 1.9E-121 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 D172_020060 72da59f80c7d31663feada200c35d42c 356 SUPERFAMILY SSF51735 11 345 1.44E-92 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_010880 33c78cd2a482ee4f692c388a398ec322 437 Pfam PF03553 Na+/H+ antiporter family 49 217 5.7E-16 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 D172_007865 1c092dade51f4859169dad02a49b7743 105 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 101 8.9E-34 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 D172_007865 1c092dade51f4859169dad02a49b7743 105 Gene3D G3DSA:3.30.1390.10 4 105 4.0E-42 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D172_007865 1c092dade51f4859169dad02a49b7743 105 SUPERFAMILY SSF54736 20 104 8.89E-31 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D172_007865 1c092dade51f4859169dad02a49b7743 105 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 12 100 27.976 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS D172_020170 1b93c1579903df62ae01c883812635d5 1015 SUPERFAMILY SSF46548 515 689 1.11E-9 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 D172_020170 1b93c1579903df62ae01c883812635d5 1015 Gene3D G3DSA:3.30.465.10 247 280 6.7E-5 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 D172_020170 1b93c1579903df62ae01c883812635d5 1015 SUPERFAMILY SSF56176 31 281 1.02E-48 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 D172_020170 1b93c1579903df62ae01c883812635d5 1015 Pfam PF01565 FAD binding domain 52 188 5.0E-33 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 D172_020170 1b93c1579903df62ae01c883812635d5 1015 SUPERFAMILY SSF55103 260 543 2.45E-49 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 D172_020170 1b93c1579903df62ae01c883812635d5 1015 Pfam PF13183 4Fe-4S dicluster domain 576 685 9.7E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain D172_020170 1b93c1579903df62ae01c883812635d5 1015 Pfam PF02913 FAD linked oxidases, C-terminal domain 283 539 9.0E-57 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 D172_020170 1b93c1579903df62ae01c883812635d5 1015 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 671 682 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site D172_020170 1b93c1579903df62ae01c883812635d5 1015 Gene3D G3DSA:3.30.465.40 31 216 2.4E-40 T 14-10-2018 D172_018035 b9e1163b8150de9a52b3e877e411a20f 129 Gene3D G3DSA:3.10.450.50 1 129 7.4E-27 T 14-10-2018 D172_018035 b9e1163b8150de9a52b3e877e411a20f 129 SUPERFAMILY SSF54427 1 128 8.15E-27 T 14-10-2018 IPR032710 NTF2-like domain superfamily D172_018035 b9e1163b8150de9a52b3e877e411a20f 129 Pfam PF12680 SnoaL-like domain 21 114 8.8E-11 T 14-10-2018 IPR037401 SnoaL-like domain D172_007625 3b3830d59adb12a0c8cc516c64356935 166 Pfam PF12680 SnoaL-like domain 40 149 1.3E-10 T 14-10-2018 IPR037401 SnoaL-like domain D172_007625 3b3830d59adb12a0c8cc516c64356935 166 Gene3D G3DSA:3.10.450.50 19 166 2.7E-25 T 14-10-2018 D172_007625 3b3830d59adb12a0c8cc516c64356935 166 SUPERFAMILY SSF54427 34 162 1.34E-21 T 14-10-2018 IPR032710 NTF2-like domain superfamily D172_007390 32038e805c854f18b15e9eabc9b4cfe5 116 Pfam PF01627 Hpt domain 21 88 1.7E-8 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 D172_007390 32038e805c854f18b15e9eabc9b4cfe5 116 Gene3D G3DSA:1.20.120.160 1 104 8.9E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_007390 32038e805c854f18b15e9eabc9b4cfe5 116 SUPERFAMILY SSF47226 1 96 6.93E-18 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 D172_006280 270ed8dd4f2712152429d08e501127be 400 Gene3D G3DSA:3.40.50.1820 3 253 8.8E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_006280 270ed8dd4f2712152429d08e501127be 400 SUPERFAMILY SSF82784 225 398 2.22E-43 T 14-10-2018 IPR036102 OsmC/Ohr superfamily D172_006280 270ed8dd4f2712152429d08e501127be 400 Gene3D G3DSA:3.30.300.20 254 400 1.0E-39 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta D172_006280 270ed8dd4f2712152429d08e501127be 400 SUPERFAMILY SSF53474 3 249 6.4E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_006280 270ed8dd4f2712152429d08e501127be 400 Pfam PF12146 Serine aminopeptidase, S33 46 125 2.9E-12 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 D172_006280 270ed8dd4f2712152429d08e501127be 400 Pfam PF02566 OsmC-like protein 294 394 1.3E-18 T 14-10-2018 IPR003718 OsmC/Ohr family D172_003750 034132c5590abfa4dc8208b81616fd23 244 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 219 7.8E-28 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 D172_003750 034132c5590abfa4dc8208b81616fd23 244 Gene3D G3DSA:3.90.226.10 1 228 7.0E-45 T 14-10-2018 D172_003750 034132c5590abfa4dc8208b81616fd23 244 SUPERFAMILY SSF52096 2 236 8.6E-41 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_007985 a60745dd98f23af7361eb44ffda6cb25 420 Pfam PF00155 Aminotransferase class I and II 173 415 5.3E-26 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D172_007985 a60745dd98f23af7361eb44ffda6cb25 420 SUPERFAMILY SSF53383 28 419 1.28E-57 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_007985 a60745dd98f23af7361eb44ffda6cb25 420 Gene3D G3DSA:3.40.640.10 1 420 1.2E-143 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_017530 59c07211c1118a346827f99cec1736d4 442 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 441 2.9E-140 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 D172_017530 59c07211c1118a346827f99cec1736d4 442 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 440 1.5E-133 T 14-10-2018 IPR010263 Type VI secretion protein, VC_A0114 D172_002055 f0d1f8da3ac1bac249e3c1248c96304e 358 Pfam PF14130 Domain of unknown function (DUF4297) 11 219 6.2E-48 T 14-10-2018 IPR025382 Domain of unknown function DUF4297 D172_010315 8784b53f5ea9fa7ed94823742bc26eb7 318 Pfam PF13271 Domain of unknown function (DUF4062) 6 88 4.6E-27 T 14-10-2018 IPR025139 Domain of unknown function DUF4062 D172_020075 1bd0912727e233a76c9d4971055b3a5d 349 SUPERFAMILY SSF52151 31 339 1.49E-20 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase D172_003635 ca7aca3856a41bd77607dcc4c18eeeb9 198 Pfam PF10881 Protein of unknown function (DUF2726) 36 160 6.5E-37 T 14-10-2018 IPR024402 Domain of unknown function DUF2726 D172_014970 3e5531ceb49505b3871fc2524f874d34 605 Pfam PF00905 Penicillin binding protein transpeptidase domain 284 579 2.9E-69 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 D172_014970 3e5531ceb49505b3871fc2524f874d34 605 Pfam PF03717 Penicillin-binding Protein dimerisation domain 62 245 8.0E-20 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 D172_014970 3e5531ceb49505b3871fc2524f874d34 605 SUPERFAMILY SSF56601 259 588 1.47E-84 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D172_014970 3e5531ceb49505b3871fc2524f874d34 605 SUPERFAMILY SSF56519 56 257 3.14E-42 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 D172_014970 3e5531ceb49505b3871fc2524f874d34 605 Gene3D G3DSA:3.30.450.330 260 584 3.5E-101 T 14-10-2018 D172_014970 3e5531ceb49505b3871fc2524f874d34 605 Gene3D G3DSA:3.40.710.10 320 502 3.5E-101 T 14-10-2018 D172_014970 3e5531ceb49505b3871fc2524f874d34 605 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 12 595 41.871 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 D172_016430 79d293e67dfb314fe6910ba8e5b8df94 680 Gene3D G3DSA:2.60.40.1180 575 680 1.1E-36 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta D172_016430 79d293e67dfb314fe6910ba8e5b8df94 680 Pfam PF10566 Glycoside hydrolase 97 276 570 9.4E-119 T 14-10-2018 IPR019563 Glycosyl-hydrolase 97, catalytic domain D172_016430 79d293e67dfb314fe6910ba8e5b8df94 680 SUPERFAMILY SSF51445 274 554 1.79E-9 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_016430 79d293e67dfb314fe6910ba8e5b8df94 680 Gene3D G3DSA:3.20.20.70 265 574 1.6E-127 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_016430 79d293e67dfb314fe6910ba8e5b8df94 680 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 572 678 4.3E-31 T 14-10-2018 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain D172_016430 79d293e67dfb314fe6910ba8e5b8df94 680 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 22 271 9.0E-72 T 14-10-2018 IPR029486 Glycosyl-hydrolase 97, N-terminal domain D172_016430 79d293e67dfb314fe6910ba8e5b8df94 680 Gene3D G3DSA:2.70.98.10 20 264 6.2E-79 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 D172_005455 7e7a2ff45a3346930612527a2fd46d5a 316 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 305 1.0E-96 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 D172_005455 7e7a2ff45a3346930612527a2fd46d5a 316 Pfam PF01687 Riboflavin kinase 184 305 4.1E-37 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 D172_005455 7e7a2ff45a3346930612527a2fd46d5a 316 Gene3D G3DSA:3.40.50.620 1 187 6.3E-59 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold D172_005455 7e7a2ff45a3346930612527a2fd46d5a 316 Pfam PF06574 FAD synthetase 13 166 1.6E-53 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 D172_005455 7e7a2ff45a3346930612527a2fd46d5a 316 SUPERFAMILY SSF82114 174 307 3.27E-43 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 D172_005455 7e7a2ff45a3346930612527a2fd46d5a 316 Gene3D G3DSA:2.40.30.30 188 313 2.1E-39 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 D172_005455 7e7a2ff45a3346930612527a2fd46d5a 316 SMART SM00904 183 306 4.7E-57 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 D172_005455 7e7a2ff45a3346930612527a2fd46d5a 316 PIRSF PIRSF004491 1 312 2.0E-102 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 D172_005455 7e7a2ff45a3346930612527a2fd46d5a 316 SUPERFAMILY SSF52374 17 175 1.13E-27 T 14-10-2018 D172_015290 6a36797003af8922293ca098eb08334d 258 Gene3D G3DSA:2.60.120.620 20 255 6.5E-19 T 14-10-2018 D172_015290 6a36797003af8922293ca098eb08334d 258 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 36 228 4.3E-6 T 14-10-2018 IPR008775 Phytanoyl-CoA dioxygenase D172_015290 6a36797003af8922293ca098eb08334d 258 SUPERFAMILY SSF51197 33 247 4.49E-27 T 14-10-2018 D172_015685 363ec9b7e81338e9470baac9d6e04469 208 Pfam PF14065 Protein of unknown function (DUF4255) 9 189 1.0E-20 T 14-10-2018 IPR025351 Protein of unknown function DUF4255 D172_019645 a0459ad79b7ba64e166232e506ffa78d 166 Pfam PF11086 Protein of unknown function (DUF2878) 6 151 1.2E-29 T 14-10-2018 IPR021306 Protein of unknown function DUF2878 D172_015630 4bd13ff497c97b4123ea21be8c50ec17 151 Pfam PF06841 T4-like virus tail tube protein gp19 24 143 6.1E-14 T 14-10-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 D172_009930 64265d8f87b8732ec1477089e26f55e2 266 SUPERFAMILY SSF53335 6 245 3.95E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_009930 64265d8f87b8732ec1477089e26f55e2 266 PIRSF PIRSF018249 1 265 3.1E-71 T 14-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 D172_009930 64265d8f87b8732ec1477089e26f55e2 266 Pfam PF13847 Methyltransferase domain 84 194 2.3E-14 T 14-10-2018 IPR025714 Methyltransferase domain D172_009930 64265d8f87b8732ec1477089e26f55e2 266 Gene3D G3DSA:3.40.50.150 3 266 2.3E-67 T 14-10-2018 D172_005465 63fddd2230dc3a4083d6be7f848942d4 166 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 16.269 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D172_005465 63fddd2230dc3a4083d6be7f848942d4 166 TIGRFAM TIGR00077 lspA: signal peptidase II 5 160 7.8E-46 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D172_005465 63fddd2230dc3a4083d6be7f848942d4 166 Pfam PF01252 Signal peptidase (SPase) II 16 156 4.1E-38 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D172_005465 63fddd2230dc3a4083d6be7f848942d4 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.2E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D172_005465 63fddd2230dc3a4083d6be7f848942d4 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.2E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D172_005465 63fddd2230dc3a4083d6be7f848942d4 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.2E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D172_005465 63fddd2230dc3a4083d6be7f848942d4 166 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 D172_018190 6166c9a648980405689379d3482d7b0e 226 Gene3D G3DSA:1.20.120.1760 3 197 1.2E-25 T 14-10-2018 D172_018190 6166c9a648980405689379d3482d7b0e 226 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 90 1.7E-9 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 D172_018190 6166c9a648980405689379d3482d7b0e 226 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 90 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 D172_001975 c4616ff0224774057d0841d8320f9a7a 422 Pfam PF01384 Phosphate transporter family 26 409 1.9E-114 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 D172_015220 fcb427b285280e58efa17415592ba857 157 Gene3D G3DSA:3.40.30.10 2 157 9.1E-61 T 14-10-2018 D172_015220 fcb427b285280e58efa17415592ba857 157 SUPERFAMILY SSF52833 1 156 2.95E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_015220 fcb427b285280e58efa17415592ba857 157 Pfam PF08534 Redoxin 4 154 9.4E-40 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 D172_019250 0e500e1c25f2f0176ec53103328e0d59 271 SUPERFAMILY SSF51430 6 265 1.83E-81 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily D172_019250 0e500e1c25f2f0176ec53103328e0d59 271 Pfam PF00248 Aldo/keto reductase family 10 254 9.2E-50 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain D172_019250 0e500e1c25f2f0176ec53103328e0d59 271 PRINTS PR00069 Aldo-keto reductase signature 30 54 1.0E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 D172_019250 0e500e1c25f2f0176ec53103328e0d59 271 PRINTS PR00069 Aldo-keto reductase signature 154 183 1.0E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 D172_019250 0e500e1c25f2f0176ec53103328e0d59 271 PRINTS PR00069 Aldo-keto reductase signature 86 104 1.0E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 D172_019250 0e500e1c25f2f0176ec53103328e0d59 271 PRINTS PR00069 Aldo-keto reductase signature 191 215 1.0E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 D172_019250 0e500e1c25f2f0176ec53103328e0d59 271 PRINTS PR00069 Aldo-keto reductase signature 119 136 1.0E-47 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 D172_019250 0e500e1c25f2f0176ec53103328e0d59 271 PIRSF PIRSF000097 2 271 6.5E-69 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 D172_019250 0e500e1c25f2f0176ec53103328e0d59 271 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 119 136 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 D172_019250 0e500e1c25f2f0176ec53103328e0d59 271 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 34 51 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 D172_019250 0e500e1c25f2f0176ec53103328e0d59 271 Gene3D G3DSA:3.20.20.100 2 266 5.9E-89 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily D172_010005 8ff124786e4342fc85192f1663163ee0 206 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 14 197 7.0E-67 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB D172_010005 8ff124786e4342fc85192f1663163ee0 206 Pfam PF13036 Peptidoglycan-synthase activator LpoB 51 195 1.0E-54 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB D172_010005 8ff124786e4342fc85192f1663163ee0 206 Gene3D G3DSA:3.40.50.10610 49 198 3.5E-37 T 14-10-2018 D172_016500 e2a2cf6e4bd7f7aea2402363a671aa8c 849 SUPERFAMILY SSF52317 602 839 5.04E-13 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like D172_016500 e2a2cf6e4bd7f7aea2402363a671aa8c 849 Pfam PF00246 Zinc carboxypeptidase 58 298 6.2E-21 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 D172_016500 e2a2cf6e4bd7f7aea2402363a671aa8c 849 SUPERFAMILY SSF53187 44 333 1.62E-56 T 14-10-2018 D172_016500 e2a2cf6e4bd7f7aea2402363a671aa8c 849 SMART SM00631 50 368 1.2E-4 T 14-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 D172_016500 e2a2cf6e4bd7f7aea2402363a671aa8c 849 Gene3D G3DSA:3.40.630.10 46 315 1.4E-35 T 14-10-2018 D172_010985 498a1d99208019c8c7e0df09c097f6e1 640 PIRSF PIRSF000549 1 640 3.6E-283 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 D172_010985 498a1d99208019c8c7e0df09c097f6e1 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 1.5E-71 T 14-10-2018 IPR010650 PrkA C-terminal domain D172_010985 498a1d99208019c8c7e0df09c097f6e1 640 SUPERFAMILY SSF52540 75 363 1.03E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_010985 498a1d99208019c8c7e0df09c097f6e1 640 Pfam PF08298 PrkA AAA domain 20 376 4.7E-172 T 14-10-2018 IPR013153 PrkA AAA domain D172_010985 498a1d99208019c8c7e0df09c097f6e1 640 SMART SM00763 19 376 1.9E-204 T 14-10-2018 IPR013153 PrkA AAA domain D172_005580 2923c6cccb0219bdd13d84b139a3392a 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.484 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_005580 2923c6cccb0219bdd13d84b139a3392a 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 1.6E-29 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_005580 2923c6cccb0219bdd13d84b139a3392a 82 Gene3D G3DSA:3.30.1320.10 1 81 1.8E-31 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_005580 2923c6cccb0219bdd13d84b139a3392a 82 Pfam PF00886 Ribosomal protein S16 8 68 8.1E-24 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_005580 2923c6cccb0219bdd13d84b139a3392a 82 SUPERFAMILY SSF54565 1 76 3.92E-29 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_011815 bf08b16d227f6e3c61029457908389a7 678 Pfam PF04632 Fusaric acid resistance protein family 16 675 3.6E-145 T 14-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 D172_008215 dd939ae9d18be4031660b03f61061cc8 73 Pfam PF11197 Protein of unknown function (DUF2835) 4 71 3.1E-24 T 14-10-2018 IPR021363 Protein of unknown function DUF2835 D172_001040 9d4240e59a726fb87f5074692df2740c 211 Pfam PF00297 Ribosomal protein L3 51 184 6.2E-15 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001040 9d4240e59a726fb87f5074692df2740c 211 ProSitePatterns PS00474 Ribosomal protein L3 signature. 103 126 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site D172_001040 9d4240e59a726fb87f5074692df2740c 211 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 209 40.065 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001040 9d4240e59a726fb87f5074692df2740c 211 Gene3D G3DSA:2.40.50.620 34 98 5.2E-13 T 14-10-2018 D172_001040 9d4240e59a726fb87f5074692df2740c 211 Gene3D G3DSA:2.40.30.10 123 211 1.5E-18 T 14-10-2018 D172_001040 9d4240e59a726fb87f5074692df2740c 211 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 206 2.7E-90 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001040 9d4240e59a726fb87f5074692df2740c 211 SUPERFAMILY SSF50447 2 210 1.68E-81 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily D172_019885 3d0f7e7a96dd25d562ddbe783eb7c3cd 181 Gene3D G3DSA:1.10.10.10 3 85 4.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_019885 3d0f7e7a96dd25d562ddbe783eb7c3cd 181 Pfam PF01047 MarR family 37 81 1.5E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 D172_019885 3d0f7e7a96dd25d562ddbe783eb7c3cd 181 SUPERFAMILY SSF46785 7 145 4.43E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_019885 3d0f7e7a96dd25d562ddbe783eb7c3cd 181 PIRSF PIRSF006707 1 175 5.4E-48 T 14-10-2018 IPR026282 DNA-binding protein, MJ1563 type D172_004580 30e2add6e29a2ea91ad4385f16c0a563 395 Pfam PF05762 VWA domain containing CoxE-like protein 184 278 1.4E-9 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like D172_006230 f5a7bd51eed0750fc6d4aeff76ca6652 228 Pfam PF11813 Protein of unknown function (DUF3334) 3 228 3.1E-114 T 14-10-2018 IPR024513 Protein of unknown function DUF3334 D172_006230 f5a7bd51eed0750fc6d4aeff76ca6652 228 Gene3D G3DSA:3.40.1550.10 5 176 3.6E-19 T 14-10-2018 IPR028976 CheC-like superfamily D172_006230 f5a7bd51eed0750fc6d4aeff76ca6652 228 SUPERFAMILY SSF103039 11 173 1.44E-20 T 14-10-2018 IPR028976 CheC-like superfamily D172_003730 3a4adedeae6f5a7414d1b400530d2e41 187 SUPERFAMILY SSF101327 5 173 1.57E-38 T 14-10-2018 IPR036255 YgfB-like superfamily D172_003730 3a4adedeae6f5a7414d1b400530d2e41 187 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 15 162 7.7E-13 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 D172_003730 3a4adedeae6f5a7414d1b400530d2e41 187 Pfam PF03695 Uncharacterised protein family (UPF0149) 11 174 1.1E-34 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 D172_003730 3a4adedeae6f5a7414d1b400530d2e41 187 Gene3D G3DSA:1.20.120.740 2 187 3.6E-51 T 14-10-2018 D172_011865 0ba17d99be7900c5783eee416c3e47d9 153 Gene3D G3DSA:3.40.630.30 1 152 1.6E-30 T 14-10-2018 D172_011865 0ba17d99be7900c5783eee416c3e47d9 153 SUPERFAMILY SSF55729 1 151 2.57E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_011865 0ba17d99be7900c5783eee416c3e47d9 153 Pfam PF00583 Acetyltransferase (GNAT) family 43 129 1.6E-14 T 14-10-2018 IPR000182 GNAT domain D172_016135 733148d577dbdbe61ac39bef4a3aeae5 224 SUPERFAMILY SSF46894 122 220 1.28E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 D172_016135 733148d577dbdbe61ac39bef4a3aeae5 224 Gene3D G3DSA:3.40.50.2300 1 121 4.2E-35 T 14-10-2018 D172_016135 733148d577dbdbe61ac39bef4a3aeae5 224 SMART SM00448 1 112 3.7E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_016135 733148d577dbdbe61ac39bef4a3aeae5 224 SMART SM00862 146 221 2.1E-9 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_016135 733148d577dbdbe61ac39bef4a3aeae5 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 8.8E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 D172_016135 733148d577dbdbe61ac39bef4a3aeae5 224 Gene3D G3DSA:1.10.10.10 123 224 6.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_016135 733148d577dbdbe61ac39bef4a3aeae5 224 SUPERFAMILY SSF52172 1 126 5.98E-36 T 14-10-2018 IPR011006 CheY-like superfamily D172_016135 733148d577dbdbe61ac39bef4a3aeae5 224 Pfam PF00072 Response regulator receiver domain 3 112 2.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 D172_012995 00ed82b63793fcb1e94e01cfdd1c03b7 135 Gene3D G3DSA:3.40.190.10 20 134 6.5E-12 T 14-10-2018 D172_012995 00ed82b63793fcb1e94e01cfdd1c03b7 135 SUPERFAMILY SSF53850 18 132 5.7E-15 T 14-10-2018 D172_009590 315040feb72318e9dde741e5372ab496 148 Pfam PF11215 Protein of unknown function (DUF3010) 1 137 7.8E-57 T 14-10-2018 IPR021378 Protein of unknown function DUF3010 D172_002365 ab4ea89f7d2609d5bbece309b4054b89 228 Pfam PF03942 DTW domain 28 210 7.4E-41 T 14-10-2018 IPR005636 DTW D172_002365 ab4ea89f7d2609d5bbece309b4054b89 228 SMART SM01144 26 218 2.8E-65 T 14-10-2018 IPR005636 DTW D172_009050 2aef8053e755ba4c4d17108f7d0b3acc 298 SUPERFAMILY SSF51569 5 291 7.51E-68 T 14-10-2018 D172_009050 2aef8053e755ba4c4d17108f7d0b3acc 298 Pfam PF00682 HMGL-like 7 275 3.9E-53 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 D172_009050 2aef8053e755ba4c4d17108f7d0b3acc 298 Gene3D G3DSA:3.20.20.70 2 298 1.0E-126 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_010125 0be2a5f64d8fea346407710a4e0b6036 278 Hamap MF_01805 Segregation and condensation protein A [scpA]. 43 274 21.202 T 14-10-2018 IPR003768 Segregation and condensation protein A D172_010125 0be2a5f64d8fea346407710a4e0b6036 278 Pfam PF02616 Segregation and condensation protein ScpA 60 272 1.6E-25 T 14-10-2018 IPR003768 Segregation and condensation protein A D172_015715 0675c5e18c9f12b1c4909627623b2bf6 479 SUPERFAMILY SSF111283 15 478 6.54E-133 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 D172_015715 0675c5e18c9f12b1c4909627623b2bf6 479 PIRSF PIRSF004919 12 479 9.0E-146 T 14-10-2018 IPR025502 TldD D172_015715 0675c5e18c9f12b1c4909627623b2bf6 479 Pfam PF01523 Putative modulator of DNA gyrase 33 330 2.2E-69 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 D172_015715 0675c5e18c9f12b1c4909627623b2bf6 479 Gene3D G3DSA:3.30.2290.10 5 238 6.5E-17 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal D172_005835 a7d8b51ff15e3c52348be09ebd4a8105 185 SMART SM00463 98 176 1.7E-12 T 14-10-2018 IPR002625 Smr domain D172_005835 a7d8b51ff15e3c52348be09ebd4a8105 185 SUPERFAMILY SSF160443 99 175 1.57E-11 T 14-10-2018 IPR036063 Smr domain superfamily D172_005835 a7d8b51ff15e3c52348be09ebd4a8105 185 Gene3D G3DSA:3.30.1370.110 52 180 6.6E-25 T 14-10-2018 D172_005835 a7d8b51ff15e3c52348be09ebd4a8105 185 Pfam PF01713 Smr domain 101 174 1.1E-17 T 14-10-2018 IPR002625 Smr domain D172_002465 8044ef576942018d2c44f094f47ab1f8 596 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 515 580 2.5E-14 T 14-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial D172_002465 8044ef576942018d2c44f094f47ab1f8 596 Gene3D G3DSA:3.40.50.200 149 491 4.2E-102 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D172_002465 8044ef576942018d2c44f094f47ab1f8 596 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 427 437 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site D172_002465 8044ef576942018d2c44f094f47ab1f8 596 Gene3D G3DSA:2.60.120.380 497 594 3.8E-37 T 14-10-2018 D172_002465 8044ef576942018d2c44f094f47ab1f8 596 SUPERFAMILY SSF52743 105 493 1.57E-76 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 D172_002465 8044ef576942018d2c44f094f47ab1f8 596 Pfam PF00082 Subtilase family 180 465 1.8E-48 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 D172_002465 8044ef576942018d2c44f094f47ab1f8 596 PRINTS PR00723 Subtilisin serine protease family (S8) signature 426 442 6.2E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related D172_002465 8044ef576942018d2c44f094f47ab1f8 596 PRINTS PR00723 Subtilisin serine protease family (S8) signature 180 199 6.2E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related D172_002465 8044ef576942018d2c44f094f47ab1f8 596 PRINTS PR00723 Subtilisin serine protease family (S8) signature 244 257 6.2E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related D172_002465 8044ef576942018d2c44f094f47ab1f8 596 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 248 258 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site D172_007585 d9f08bd8df46030dcdb00cf4be76bda7 125 SUPERFAMILY SSF46785 2 120 2.63E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_007585 d9f08bd8df46030dcdb00cf4be76bda7 125 Pfam PF03965 Penicillinase repressor 6 117 8.0E-21 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 D172_007585 d9f08bd8df46030dcdb00cf4be76bda7 125 PIRSF PIRSF019455 3 125 1.0E-20 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 D172_007585 d9f08bd8df46030dcdb00cf4be76bda7 125 Gene3D G3DSA:1.10.10.10 2 75 1.7E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_007160 6105e09892c3d8b2bcfef50d1095272d 489 TIGRFAM TIGR00886 2A0108: nitrite transporter 17 434 8.3E-96 T 14-10-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 D172_007160 6105e09892c3d8b2bcfef50d1095272d 489 Gene3D G3DSA:1.20.1250.20 11 240 2.0E-39 T 14-10-2018 D172_007160 6105e09892c3d8b2bcfef50d1095272d 489 SUPERFAMILY SSF103473 11 467 2.49E-55 T 14-10-2018 IPR036259 MFS transporter superfamily D172_007160 6105e09892c3d8b2bcfef50d1095272d 489 ProSitePatterns PS00216 Sugar transport proteins signature 1. 350 367 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D172_007160 6105e09892c3d8b2bcfef50d1095272d 489 Gene3D G3DSA:1.20.1250.20 288 479 1.4E-34 T 14-10-2018 D172_007160 6105e09892c3d8b2bcfef50d1095272d 489 Pfam PF07690 Major Facilitator Superfamily 23 436 1.6E-33 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_011290 340f58bcdd0d3562e1ef5d15f63161e3 236 SUPERFAMILY SSF100950 8 228 1.91E-52 T 14-10-2018 IPR037171 NagB/RpiA transferase-like D172_011290 340f58bcdd0d3562e1ef5d15f63161e3 236 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 231 1.8E-51 T 14-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 D172_011290 340f58bcdd0d3562e1ef5d15f63161e3 236 Gene3D G3DSA:3.40.50.1360 2 236 3.3E-64 T 14-10-2018 D172_011290 340f58bcdd0d3562e1ef5d15f63161e3 236 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 225 3.6E-51 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 D172_017225 05f6f7f1c209df2fb8e0ca91460f039d 299 Pfam PF03994 Domain of Unknown Function (DUF350) 90 145 3.3E-9 T 14-10-2018 IPR007140 Protein of unknown function DUF350 D172_005315 a2073801985957b810b959d66c1422a4 399 SUPERFAMILY SSF103473 6 388 1.57E-58 T 14-10-2018 IPR036259 MFS transporter superfamily D172_005315 a2073801985957b810b959d66c1422a4 399 Gene3D G3DSA:1.20.1720.10 12 386 1.2E-86 T 14-10-2018 D172_005315 a2073801985957b810b959d66c1422a4 399 Pfam PF07690 Major Facilitator Superfamily 16 354 5.6E-47 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_005315 a2073801985957b810b959d66c1422a4 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 D172_005315 a2073801985957b810b959d66c1422a4 399 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 378 2.5E-69 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 D172_016875 6f40d1afc8cbaf8d79e5dc7f6e7a6fc5 380 Pfam PF00155 Aminotransferase class I and II 27 375 1.3E-63 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 D172_016875 6f40d1afc8cbaf8d79e5dc7f6e7a6fc5 380 SUPERFAMILY SSF53383 2 379 5.26E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase D172_016875 6f40d1afc8cbaf8d79e5dc7f6e7a6fc5 380 Gene3D G3DSA:3.40.640.10 39 278 4.6E-132 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 D172_016875 6f40d1afc8cbaf8d79e5dc7f6e7a6fc5 380 Gene3D G3DSA:3.90.1150.10 14 376 4.6E-132 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 D172_009060 9f16789f3eb11eb3171ca63aca50fb81 218 SMART SM00882 6 202 2.7E-71 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 D172_009060 9f16789f3eb11eb3171ca63aca50fb81 218 SUPERFAMILY SSF100950 5 216 1.68E-74 T 14-10-2018 IPR037171 NagB/RpiA transferase-like D172_009060 9f16789f3eb11eb3171ca63aca50fb81 218 Gene3D G3DSA:3.40.1080.10 1 213 2.6E-96 T 14-10-2018 D172_009060 9f16789f3eb11eb3171ca63aca50fb81 218 Pfam PF01144 Coenzyme A transferase 6 200 2.0E-41 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 D172_009060 9f16789f3eb11eb3171ca63aca50fb81 218 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 4 208 8.3E-99 T 14-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 D172_009060 9f16789f3eb11eb3171ca63aca50fb81 218 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 14-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 D172_019355 77e754ed121a94968da16909b41a2fe9 412 SUPERFAMILY SSF51905 5 365 4.49E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_019355 77e754ed121a94968da16909b41a2fe9 412 Gene3D G3DSA:3.50.50.60 3 412 8.5E-121 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_019355 77e754ed121a94968da16909b41a2fe9 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 305 321 1.6E-5 T 14-10-2018 D172_019355 77e754ed121a94968da16909b41a2fe9 412 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.6E-5 T 14-10-2018 D172_019355 77e754ed121a94968da16909b41a2fe9 412 Pfam PF04820 Tryptophan halogenase 99 374 6.7E-16 T 14-10-2018 IPR006905 Flavin-dependent halogenase D172_019355 77e754ed121a94968da16909b41a2fe9 412 Pfam PF04820 Tryptophan halogenase 8 96 6.8E-8 T 14-10-2018 IPR006905 Flavin-dependent halogenase D172_013610 b7daaddf558a0c3dabc2af4c2bd2601a 324 SMART SM01321 12 187 0.0016 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D172_013610 b7daaddf558a0c3dabc2af4c2bd2601a 324 SUPERFAMILY SSF143422 15 193 1.96E-19 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D172_013470 ebd49d712dba8e725e04bb2a18b2da3a 480 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 232 460 1.2E-47 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 D172_013470 ebd49d712dba8e725e04bb2a18b2da3a 480 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 106 1.7E-18 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 D172_018210 948ea65631b009a5160b51ec9a5ddc96 272 Pfam PF04784 Protein of unknown function, DUF547 83 195 1.6E-25 T 14-10-2018 IPR006869 Domain of unknown function DUF547 D172_020165 3d442ee0cdb6d392dca850e90e1eae3a 399 Gene3D G3DSA:1.20.1530.20 6 398 7.1E-8 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily D172_020165 3d442ee0cdb6d392dca850e90e1eae3a 399 Pfam PF00999 Sodium/hydrogen exchanger family 12 390 3.3E-37 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 D172_005125 0965185ba60e415a9c1f04234cb3ae8a 237 Pfam PF07386 Protein of unknown function (DUF1499) 96 231 5.8E-30 T 14-10-2018 IPR010865 Protein of unknown function DUF1499 D172_016620 6e586d41db50c4fa19d438270b5efe01 146 SUPERFAMILY SSF54637 7 145 3.28E-32 T 14-10-2018 IPR029069 HotDog domain superfamily D172_016620 6e586d41db50c4fa19d438270b5efe01 146 Gene3D G3DSA:3.10.129.10 1 146 2.5E-48 T 14-10-2018 D172_016620 6e586d41db50c4fa19d438270b5efe01 146 Pfam PF03061 Thioesterase superfamily 56 134 3.4E-12 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 D172_016620 6e586d41db50c4fa19d438270b5efe01 146 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 141 1.3E-32 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 D172_019655 1336eaba6b22cee59198e2528e9c453d 179 Pfam PF12915 Protein of unknown function (DUF3833) 17 178 7.8E-67 T 14-10-2018 IPR024409 Protein of unknown function DUF3833 D172_015970 78dd74036228fc228630a0ad223b12dc 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 D172_015970 78dd74036228fc228630a0ad223b12dc 511 Gene3D G3DSA:1.10.275.10 2 197 1.8E-63 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal D172_015970 78dd74036228fc228630a0ad223b12dc 511 Gene3D G3DSA:1.20.200.10 198 509 1.5E-119 T 14-10-2018 D172_015970 78dd74036228fc228630a0ad223b12dc 511 Pfam PF00221 Aromatic amino acid lyase 11 470 9.4E-177 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 D172_015970 78dd74036228fc228630a0ad223b12dc 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 501 5.0E-210 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D172_015970 78dd74036228fc228630a0ad223b12dc 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 42.716 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 D172_015970 78dd74036228fc228630a0ad223b12dc 511 SUPERFAMILY SSF48557 4 499 2.59E-183 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 D172_015695 718994c12c543aa43d00c9c7751b5aa0 143 SUPERFAMILY SSF53955 11 140 2.2E-33 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily D172_015695 718994c12c543aa43d00c9c7751b5aa0 143 Pfam PF00959 Phage lysozyme 35 132 1.8E-9 T 14-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 D172_015695 718994c12c543aa43d00c9c7751b5aa0 143 Gene3D G3DSA:1.10.530.40 10 143 2.6E-39 T 14-10-2018 D172_002025 c18c3e930e1a49cef817af24dcb1c008 269 Gene3D G3DSA:3.40.190.10 109 206 8.5E-11 T 14-10-2018 D172_002025 c18c3e930e1a49cef817af24dcb1c008 269 Gene3D G3DSA:3.40.190.10 69 241 8.5E-11 T 14-10-2018 D172_002025 c18c3e930e1a49cef817af24dcb1c008 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 73 246 1.1E-10 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D172_002025 c18c3e930e1a49cef817af24dcb1c008 269 SUPERFAMILY SSF53850 44 247 6.3E-18 T 14-10-2018 D172_004350 aef3099a7d3b9f12f7ad13a06a904269 605 SUPERFAMILY SSF56601 26 354 7.57E-61 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like D172_004350 aef3099a7d3b9f12f7ad13a06a904269 605 Pfam PF00144 Beta-lactamase 30 356 1.5E-43 T 14-10-2018 IPR001466 Beta-lactamase-related D172_004350 aef3099a7d3b9f12f7ad13a06a904269 605 Gene3D G3DSA:3.40.710.10 16 361 3.0E-66 T 14-10-2018 D172_010720 93a9efee7f8496008c2b5a7b39eade3e 293 PIRSF PIRSF000103 1 293 1.7E-71 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 D172_010720 93a9efee7f8496008c2b5a7b39eade3e 293 Gene3D G3DSA:1.10.1040.10 164 292 2.0E-38 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 D172_010720 93a9efee7f8496008c2b5a7b39eade3e 293 SUPERFAMILY SSF48179 165 290 9.52E-41 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_010720 93a9efee7f8496008c2b5a7b39eade3e 293 Gene3D G3DSA:3.40.50.720 1 163 2.8E-51 T 14-10-2018 D172_010720 93a9efee7f8496008c2b5a7b39eade3e 293 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 D172_010720 93a9efee7f8496008c2b5a7b39eade3e 293 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 284 1.2E-33 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 D172_010720 93a9efee7f8496008c2b5a7b39eade3e 293 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 158 1.3E-47 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 D172_010720 93a9efee7f8496008c2b5a7b39eade3e 293 SUPERFAMILY SSF51735 2 165 3.8E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_012940 b05a1e88e8b53065db54caf1d025a268 328 SMART SM00327 86 286 3.2E-27 T 14-10-2018 IPR002035 von Willebrand factor, type A D172_012940 b05a1e88e8b53065db54caf1d025a268 328 SUPERFAMILY SSF53300 83 263 3.12E-40 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily D172_012940 b05a1e88e8b53065db54caf1d025a268 328 Gene3D G3DSA:3.40.50.410 86 286 2.5E-56 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily D172_012940 b05a1e88e8b53065db54caf1d025a268 328 Pfam PF00092 von Willebrand factor type A domain 88 279 2.4E-29 T 14-10-2018 IPR002035 von Willebrand factor, type A D172_007045 989ed64ae6fec98274adc233467d5a9c 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 1.2E-35 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 D172_007045 989ed64ae6fec98274adc233467d5a9c 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.1E-16 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain D172_007045 989ed64ae6fec98274adc233467d5a9c 78 SUPERFAMILY SSF47336 1 76 3.8E-23 T 14-10-2018 IPR036736 ACP-like superfamily D172_007045 989ed64ae6fec98274adc233467d5a9c 78 Gene3D G3DSA:1.10.1200.10 1 77 4.7E-30 T 14-10-2018 IPR036736 ACP-like superfamily D172_007045 989ed64ae6fec98274adc233467d5a9c 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.661 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 D172_007045 989ed64ae6fec98274adc233467d5a9c 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site D172_003540 eeb37f70862fe9dca5da3542fa871a0e 188 Pfam PF04972 BON domain 50 112 2.9E-9 T 14-10-2018 IPR007055 BON domain D172_003540 eeb37f70862fe9dca5da3542fa871a0e 188 Pfam PF04972 BON domain 122 186 3.6E-19 T 14-10-2018 IPR007055 BON domain D172_003540 eeb37f70862fe9dca5da3542fa871a0e 188 SMART SM00749 127 187 5.7E-7 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria D172_013565 b2b379fdd4b2556e83cccb993cd6fe5f 106 SUPERFAMILY SSF101498 23 101 3.01E-15 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily D172_013565 b2b379fdd4b2556e83cccb993cd6fe5f 106 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 7 101 9.3E-20 T 14-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 D172_013565 b2b379fdd4b2556e83cccb993cd6fe5f 106 Pfam PF04316 Anti-sigma-28 factor, FlgM 45 98 7.9E-16 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal D172_014390 0f2ca9a4d8a20df336be2b5cf98d8333 307 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 34.73 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 D172_014390 0f2ca9a4d8a20df336be2b5cf98d8333 307 Pfam PF04381 Putative exonuclease, RdgC 1 297 4.8E-108 T 14-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 D172_017070 5d5145ce81efc2a78389e98cea741bc4 691 Pfam PF00326 Prolyl oligopeptidase family 475 690 1.3E-67 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 D172_017070 5d5145ce81efc2a78389e98cea741bc4 691 Gene3D G3DSA:2.130.10.120 84 417 2.8E-251 T 14-10-2018 D172_017070 5d5145ce81efc2a78389e98cea741bc4 691 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 544 564 1.6E-47 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_017070 5d5145ce81efc2a78389e98cea741bc4 691 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 602 617 1.6E-47 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_017070 5d5145ce81efc2a78389e98cea741bc4 691 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 486 510 1.6E-47 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_017070 5d5145ce81efc2a78389e98cea741bc4 691 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 620 642 1.6E-47 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_017070 5d5145ce81efc2a78389e98cea741bc4 691 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 460 478 1.6E-47 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_017070 5d5145ce81efc2a78389e98cea741bc4 691 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 514 533 1.6E-47 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 D172_017070 5d5145ce81efc2a78389e98cea741bc4 691 SUPERFAMILY SSF50993 12 422 2.25E-85 T 14-10-2018 D172_017070 5d5145ce81efc2a78389e98cea741bc4 691 SUPERFAMILY SSF53474 427 669 2.7E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_017070 5d5145ce81efc2a78389e98cea741bc4 691 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 16 416 1.7E-101 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 D172_017070 5d5145ce81efc2a78389e98cea741bc4 691 Gene3D G3DSA:3.40.50.1820 33 685 2.8E-251 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_015420 427f258c990748cad60353904daa6419 892 Gene3D G3DSA:3.10.560.10 356 450 1.6E-9 T 14-10-2018 D172_015420 427f258c990748cad60353904daa6419 892 Gene3D G3DSA:3.10.560.10 782 861 2.1E-9 T 14-10-2018 D172_015420 427f258c990748cad60353904daa6419 892 Gene3D G3DSA:3.10.560.10 192 278 3.3E-19 T 14-10-2018 D172_015420 427f258c990748cad60353904daa6419 892 Gene3D G3DSA:3.10.560.10 548 644 1.2E-15 T 14-10-2018 D172_015420 427f258c990748cad60353904daa6419 892 Gene3D G3DSA:3.10.560.10 279 355 1.9E-8 T 14-10-2018 D172_015420 427f258c990748cad60353904daa6419 892 Pfam PF02563 Polysaccharide biosynthesis/export protein 119 190 4.2E-12 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 D172_015420 427f258c990748cad60353904daa6419 892 Pfam PF10531 SLBB domain 202 248 2.4E-5 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_015420 427f258c990748cad60353904daa6419 892 Pfam PF10531 SLBB domain 562 612 1.1E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_015420 427f258c990748cad60353904daa6419 892 Pfam PF10531 SLBB domain 283 327 2.0E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_015420 427f258c990748cad60353904daa6419 892 Pfam PF06251 Capsule biosynthesis GfcC 666 864 1.0E-13 T 14-10-2018 IPR010425 Domain of unknown function DUF1017 D172_015285 626f33501c0768e04a9859ce9dffcf57 415 Pfam PF01943 Polysaccharide biosynthesis protein 11 266 2.1E-13 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 D172_018865 10e5e6b00914c22041588c80c0439d31 233 SUPERFAMILY SSF53850 20 230 1.19E-18 T 14-10-2018 D172_018865 10e5e6b00914c22041588c80c0439d31 233 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 21 230 8.5E-7 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D172_018865 10e5e6b00914c22041588c80c0439d31 233 Gene3D G3DSA:3.40.190.10 103 203 3.6E-14 T 14-10-2018 D172_018865 10e5e6b00914c22041588c80c0439d31 233 Gene3D G3DSA:3.40.190.10 27 230 3.6E-14 T 14-10-2018 D172_003625 02d129603af3a6960b555380347c54aa 314 Pfam PF03186 CobD/Cbib protein 208 288 6.0E-10 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 D172_003625 02d129603af3a6960b555380347c54aa 314 Pfam PF03186 CobD/Cbib protein 16 179 4.5E-17 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 D172_001655 71756188f3daa5b3a76deaf2169e6966 144 Gene3D G3DSA:3.10.180.10 2 140 5.2E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_001655 71756188f3daa5b3a76deaf2169e6966 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 136 1.0E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D172_001655 71756188f3daa5b3a76deaf2169e6966 144 SUPERFAMILY SSF54593 7 143 3.62E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_018570 0b4e7a3a4db867338dd2fd5c1b0a6001 290 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 16 258 2.3E-54 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region D172_018570 0b4e7a3a4db867338dd2fd5c1b0a6001 290 SUPERFAMILY SSF63829 6 276 2.78E-48 T 14-10-2018 D172_018570 0b4e7a3a4db867338dd2fd5c1b0a6001 290 Gene3D G3DSA:2.120.10.30 2 288 3.8E-76 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like D172_018570 0b4e7a3a4db867338dd2fd5c1b0a6001 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 134 156 1.2E-27 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) D172_018570 0b4e7a3a4db867338dd2fd5c1b0a6001 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 198 215 1.2E-27 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) D172_018570 0b4e7a3a4db867338dd2fd5c1b0a6001 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 94 115 1.2E-27 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) D172_018570 0b4e7a3a4db867338dd2fd5c1b0a6001 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 240 258 1.2E-27 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) D172_018570 0b4e7a3a4db867338dd2fd5c1b0a6001 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 17 34 1.2E-27 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) D172_018570 0b4e7a3a4db867338dd2fd5c1b0a6001 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 157 177 1.2E-27 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) D172_001425 93c85fc66ca5f3b97a3589cd8dff1526 489 SUPERFAMILY SSF53720 4 457 2.88E-128 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 D172_001425 93c85fc66ca5f3b97a3589cd8dff1526 489 Gene3D G3DSA:3.40.309.10 250 439 3.2E-142 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 D172_001425 93c85fc66ca5f3b97a3589cd8dff1526 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 D172_001425 93c85fc66ca5f3b97a3589cd8dff1526 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 D172_001425 93c85fc66ca5f3b97a3589cd8dff1526 489 Gene3D G3DSA:3.40.605.10 10 451 3.2E-142 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 D172_001425 93c85fc66ca5f3b97a3589cd8dff1526 489 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 6 487 4.2E-250 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 D172_001425 93c85fc66ca5f3b97a3589cd8dff1526 489 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 4 488 57.839 T 14-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 D172_001425 93c85fc66ca5f3b97a3589cd8dff1526 489 Pfam PF00171 Aldehyde dehydrogenase family 12 462 1.9E-124 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 D172_010135 7b9399eb576d90cb1576236a5a48c31f 284 Gene3D G3DSA:3.20.20.140 5 251 2.7E-81 T 14-10-2018 D172_010135 7b9399eb576d90cb1576236a5a48c31f 284 Pfam PF02811 PHP domain 5 74 1.2E-7 T 14-10-2018 IPR004013 PHP domain GO:0003824 D172_010135 7b9399eb576d90cb1576236a5a48c31f 284 Gene3D G3DSA:1.10.150.650 99 170 2.7E-81 T 14-10-2018 D172_010135 7b9399eb576d90cb1576236a5a48c31f 284 SMART SM00481 4 71 6.0E-15 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal D172_010135 7b9399eb576d90cb1576236a5a48c31f 284 SUPERFAMILY SSF89550 2 277 4.71E-49 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 D172_018675 f2fdceb8381c00c937c8df42f21e4919 356 Pfam PF03929 PepSY-associated TM region 6 352 1.6E-55 T 14-10-2018 IPR005625 PepSY-associated TM protein D172_017910 ad5409141448126b9971978b8a6318aa 82 Pfam PF06906 Protein of unknown function (DUF1272) 1 57 4.3E-29 T 14-10-2018 IPR010696 Protein of unknown function DUF1272 D172_014900 601ca1f17b670ad90216beadc256ad0e 180 Hamap MF_00648 Non-canonical purine NTP phosphatase. 4 176 28.696 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase D172_014900 601ca1f17b670ad90216beadc256ad0e 180 Gene3D G3DSA:3.90.950.10 2 179 4.5E-58 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D172_014900 601ca1f17b670ad90216beadc256ad0e 180 SUPERFAMILY SSF52972 4 176 5.23E-58 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like D172_014900 601ca1f17b670ad90216beadc256ad0e 180 Pfam PF01931 Protein of unknown function DUF84 9 171 9.0E-56 T 14-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 D172_014900 601ca1f17b670ad90216beadc256ad0e 180 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 8 176 8.2E-42 T 14-10-2018 IPR002786 Non-canonical purine NTP phosphatase D172_006915 a0e02d762619e2c234dd6a844b1de17d 351 Gene3D G3DSA:3.75.10.10 2 344 5.2E-120 T 14-10-2018 D172_006915 a0e02d762619e2c234dd6a844b1de17d 351 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 5 342 4.9E-114 T 14-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 D172_006915 a0e02d762619e2c234dd6a844b1de17d 351 SUPERFAMILY SSF55909 1 343 1.32E-115 T 14-10-2018 D172_012975 a9a011b6eac859d4ea1357339f6c2977 180 SUPERFAMILY SSF55729 4 160 1.81E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_012975 a9a011b6eac859d4ea1357339f6c2977 180 Gene3D G3DSA:3.40.630.30 5 169 3.0E-31 T 14-10-2018 D172_012975 a9a011b6eac859d4ea1357339f6c2977 180 Pfam PF13302 Acetyltransferase (GNAT) domain 10 156 5.1E-29 T 14-10-2018 IPR000182 GNAT domain D172_012075 a11c3d7ba625b96b490ea07b69689376 289 SUPERFAMILY SSF53474 24 282 3.39E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_012075 a11c3d7ba625b96b490ea07b69689376 289 Gene3D G3DSA:3.40.50.1820 20 287 8.0E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_012075 a11c3d7ba625b96b490ea07b69689376 289 Pfam PF00756 Putative esterase 33 184 2.9E-21 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 D172_011095 122739dabc721ce027879bad2d4854ac 205 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 123 201 7.1E-19 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 D172_011095 122739dabc721ce027879bad2d4854ac 205 SUPERFAMILY SSF74653 114 189 2.35E-24 T 14-10-2018 D172_011095 122739dabc721ce027879bad2d4854ac 205 Gene3D G3DSA:3.30.1150.10 106 202 7.9E-27 T 14-10-2018 D172_011095 122739dabc721ce027879bad2d4854ac 205 PRINTS PR01374 Gram-negative bacterial tonB protein signature 118 139 3.2E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_011095 122739dabc721ce027879bad2d4854ac 205 PRINTS PR01374 Gram-negative bacterial tonB protein signature 62 72 3.2E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_011095 122739dabc721ce027879bad2d4854ac 205 PRINTS PR01374 Gram-negative bacterial tonB protein signature 158 175 3.2E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_011095 122739dabc721ce027879bad2d4854ac 205 PRINTS PR01374 Gram-negative bacterial tonB protein signature 139 157 3.2E-16 T 14-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 D172_011095 122739dabc721ce027879bad2d4854ac 205 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 124 202 3.4E-18 T 14-10-2018 IPR006260 TonB/TolA, C-terminal D172_010805 4d86d7c804b718b128bb17cefa67f974 264 TIGRFAM TIGR04179 rhombo_lipo: rhombotail lipoprotein 5 259 4.6E-109 T 14-10-2018 IPR026443 Rhombotail lipoprotein D172_010420 c5afed1cd3f35a84959f3ac1de933741 88 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 13 77 2.0E-27 T 14-10-2018 D172_010420 c5afed1cd3f35a84959f3ac1de933741 88 Pfam PF14145 YrhK-like protein 20 74 3.0E-18 T 14-10-2018 IPR025424 YrhK domain D172_007685 f59f870f05b0b4e651a6d117c5b4e568 595 SMART SM00635 195 270 1.3E-4 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 D172_007685 f59f870f05b0b4e651a6d117c5b4e568 595 Pfam PF02368 Bacterial Ig-like domain (group 2) 196 267 1.1E-7 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 D172_007685 f59f870f05b0b4e651a6d117c5b4e568 595 SUPERFAMILY SSF49373 200 274 3.81E-11 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments D172_007685 f59f870f05b0b4e651a6d117c5b4e568 595 Gene3D G3DSA:2.60.40.1080 195 276 3.0E-13 T 14-10-2018 D172_008815 671ae334975d269423e3863fd84628ea 328 Pfam PF01882 Protein of unknown function DUF58 223 293 3.8E-5 T 14-10-2018 IPR002881 Domain of unknown function DUF58 D172_020225 172f6417500a17c75d075eace35274a3 63 Pfam PF11381 Protein of unknown function (DUF3185) 4 60 6.9E-21 T 14-10-2018 IPR021521 Protein of unknown function DUF3185 D172_002760 b9c22bfa3306d54fd0d6544b6d331a13 309 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 297 1.0E-80 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 D172_002760 b9c22bfa3306d54fd0d6544b6d331a13 309 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 307 2.2E-116 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 D172_002760 b9c22bfa3306d54fd0d6544b6d331a13 309 PIRSF PIRSF026649 2 305 2.8E-91 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 D172_002760 b9c22bfa3306d54fd0d6544b6d331a13 309 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 307 45.939 T 14-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 D172_007455 444374ce511de3f26b71d246975368f8 336 SUPERFAMILY SSF51197 7 320 3.85E-47 T 14-10-2018 D172_007455 444374ce511de3f26b71d246975368f8 336 Pfam PF13621 Cupin-like domain 21 259 2.2E-47 T 14-10-2018 D172_007455 444374ce511de3f26b71d246975368f8 336 Gene3D G3DSA:2.60.120.650 3 266 2.4E-39 T 14-10-2018 D172_007455 444374ce511de3f26b71d246975368f8 336 SMART SM00558 115 272 1.5E-4 T 14-10-2018 IPR003347 JmjC domain D172_018480 b8fd8fa62f6053246d89d054c608327c 398 Pfam PF07690 Major Facilitator Superfamily 222 395 4.3E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_018480 b8fd8fa62f6053246d89d054c608327c 398 Pfam PF07690 Major Facilitator Superfamily 20 198 2.3E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 D172_018480 b8fd8fa62f6053246d89d054c608327c 398 SUPERFAMILY SSF103473 14 392 2.22E-55 T 14-10-2018 IPR036259 MFS transporter superfamily D172_018480 b8fd8fa62f6053246d89d054c608327c 398 Gene3D G3DSA:1.20.1250.20 8 389 1.6E-47 T 14-10-2018 D172_017615 19cf371b9341e0163e79b55e48c0493d 96 Gene3D G3DSA:2.60.200.60 54 95 7.9E-11 T 14-10-2018 D172_017615 19cf371b9341e0163e79b55e48c0493d 96 Gene3D G3DSA:2.60.200.60 1 53 1.3E-11 T 14-10-2018 D172_017615 19cf371b9341e0163e79b55e48c0493d 96 Pfam PF05488 PAAR motif 18 86 8.5E-23 T 14-10-2018 IPR008727 PAAR motif D172_017655 94cc41b31fd18c87ee923b7edc38ef41 192 SUPERFAMILY SSF81901 53 178 8.76E-11 T 14-10-2018 D172_017655 94cc41b31fd18c87ee923b7edc38ef41 192 Gene3D G3DSA:1.25.40.10 29 187 1.7E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_006910 99445166577404926361032cee958adb 297 Gene3D G3DSA:3.60.110.10 2 295 1.7E-100 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D172_006910 99445166577404926361032cee958adb 297 SUPERFAMILY SSF56317 6 291 5.1E-87 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D172_006910 99445166577404926361032cee958adb 297 Pfam PF00795 Carbon-nitrogen hydrolase 8 275 2.2E-62 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 D172_000805 8cd6d0ab8e9f0dd1c046e331ac41b121 136 SMART SM00116 13 61 1.5 T 14-10-2018 IPR000644 CBS domain D172_000805 8cd6d0ab8e9f0dd1c046e331ac41b121 136 SMART SM00116 80 127 2.1E-5 T 14-10-2018 IPR000644 CBS domain D172_000805 8cd6d0ab8e9f0dd1c046e331ac41b121 136 Gene3D G3DSA:3.10.580.10 2 133 1.3E-25 T 14-10-2018 D172_000805 8cd6d0ab8e9f0dd1c046e331ac41b121 136 SUPERFAMILY SSF54631 2 127 1.17E-26 T 14-10-2018 D172_000805 8cd6d0ab8e9f0dd1c046e331ac41b121 136 Pfam PF00571 CBS domain 73 127 1.1E-9 T 14-10-2018 IPR000644 CBS domain D172_000805 8cd6d0ab8e9f0dd1c046e331ac41b121 136 Pfam PF00571 CBS domain 6 58 5.6E-5 T 14-10-2018 IPR000644 CBS domain D172_003125 f6146f72f307a7f49a3485b783df7c6c 125 Gene3D G3DSA:2.40.128.270 25 123 2.6E-22 T 14-10-2018 IPR038670 HslJ-like superfamily D172_003125 f6146f72f307a7f49a3485b783df7c6c 125 Pfam PF03724 META domain 19 118 1.9E-24 T 14-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ D172_018910 2125fc8a042331383478fa9154c529ca 77 Pfam PF06146 Phosphate-starvation-inducible E 8 70 5.1E-10 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like D172_018910 2125fc8a042331383478fa9154c529ca 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 75 7.6E-27 T 14-10-2018 IPR013468 Conserved hypothetical protein CHP02647 D172_006940 ef0b2ad658c8cea6010e2ce4c7f5b408 171 Pfam PF11157 Protein of unknown function (DUF2937) 5 160 3.0E-36 T 14-10-2018 IPR022584 Protein of unknown function DUF2937 D172_012925 1bc5698d670d06ee8f437174a5c2d19c 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 2.5E-63 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 D172_012925 1bc5698d670d06ee8f437174a5c2d19c 318 Gene3D G3DSA:3.40.50.300 17 183 1.7E-44 T 14-10-2018 D172_012925 1bc5698d670d06ee8f437174a5c2d19c 318 Gene3D G3DSA:1.10.8.300 199 315 5.8E-36 T 14-10-2018 D172_012925 1bc5698d670d06ee8f437174a5c2d19c 318 SUPERFAMILY SSF52540 6 290 3.14E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_012925 1bc5698d670d06ee8f437174a5c2d19c 318 PIRSF PIRSF002849 1 318 7.0E-127 T 14-10-2018 D172_017650 b0976eeb09d3c2816168d3047e9b6efe 257 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 15 118 2.2E-7 T 14-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN D172_017650 b0976eeb09d3c2816168d3047e9b6efe 257 SUPERFAMILY SSF159501 15 176 6.93E-11 T 14-10-2018 D172_018730 9d83c269463572003948a231db81dd83 302 SUPERFAMILY SSF53474 7 297 1.9E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_018730 9d83c269463572003948a231db81dd83 302 Gene3D G3DSA:3.40.50.1820 4 300 3.7E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_018730 9d83c269463572003948a231db81dd83 302 Pfam PF12146 Serine aminopeptidase, S33 32 206 2.3E-13 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 D172_016490 65478acce87d12744c04d5e400c42d75 245 SUPERFAMILY SSF53474 5 242 1.37E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_016490 65478acce87d12744c04d5e400c42d75 245 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 3 241 5.1E-73 T 14-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 D172_016490 65478acce87d12744c04d5e400c42d75 245 Gene3D G3DSA:3.40.50.1820 2 244 3.5E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_016490 65478acce87d12744c04d5e400c42d75 245 Pfam PF12697 Alpha/beta hydrolase family 5 237 1.1E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 D172_002335 7281936fc40e3307805ae7ab1d3a0974 184 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 29 168 9.6E-26 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D172_002335 7281936fc40e3307805ae7ab1d3a0974 184 Gene3D G3DSA:3.40.80.10 5 184 4.7E-55 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D172_002335 7281936fc40e3307805ae7ab1d3a0974 184 SUPERFAMILY SSF55846 6 180 1.57E-61 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D172_002335 7281936fc40e3307805ae7ab1d3a0974 184 SMART SM00644 17 168 3.0E-44 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 D172_007365 2a6b944583004c4ee0943d5870974b89 693 Pfam PF10531 SLBB domain 393 439 1.8E-5 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_007365 2a6b944583004c4ee0943d5870974b89 693 Pfam PF10531 SLBB domain 207 249 1.2E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_007365 2a6b944583004c4ee0943d5870974b89 693 Pfam PF10531 SLBB domain 585 627 2.2E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_007365 2a6b944583004c4ee0943d5870974b89 693 Pfam PF10531 SLBB domain 491 539 9.3E-5 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_007365 2a6b944583004c4ee0943d5870974b89 693 Pfam PF10531 SLBB domain 296 343 2.1E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 D172_007365 2a6b944583004c4ee0943d5870974b89 693 Gene3D G3DSA:3.30.1950.10 12 89 3.3E-5 T 14-10-2018 D172_007365 2a6b944583004c4ee0943d5870974b89 693 Pfam PF02563 Polysaccharide biosynthesis/export protein 23 83 6.2E-7 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 D172_007365 2a6b944583004c4ee0943d5870974b89 693 Gene3D G3DSA:3.10.560.10 578 667 1.8E-16 T 14-10-2018 D172_007365 2a6b944583004c4ee0943d5870974b89 693 Gene3D G3DSA:3.10.560.10 92 179 1.6E-13 T 14-10-2018 D172_007365 2a6b944583004c4ee0943d5870974b89 693 Gene3D G3DSA:3.10.560.10 478 572 1.1E-16 T 14-10-2018 D172_007365 2a6b944583004c4ee0943d5870974b89 693 Gene3D G3DSA:3.10.560.10 286 374 1.0E-17 T 14-10-2018 D172_007365 2a6b944583004c4ee0943d5870974b89 693 Gene3D G3DSA:3.10.560.10 198 284 4.1E-16 T 14-10-2018 D172_007365 2a6b944583004c4ee0943d5870974b89 693 Gene3D G3DSA:3.10.560.10 385 470 5.3E-14 T 14-10-2018 D172_007645 4968166a68a2c2ccd2031137749d1644 171 Gene3D G3DSA:1.20.120.450 2 171 9.3E-53 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes D172_007645 4968166a68a2c2ccd2031137749d1644 171 PIRSF PIRSF031551 2 171 1.4E-54 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 D172_007645 4968166a68a2c2ccd2031137749d1644 171 Pfam PF08020 Protein of unknown function (DUF1706) 4 166 1.4E-49 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 D172_008750 d5ccd4a842297241ac5244867a4498df 123 Pfam PF01124 MAPEG family 4 118 4.3E-26 T 14-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein D172_008750 d5ccd4a842297241ac5244867a4498df 123 Gene3D G3DSA:1.20.120.550 1 122 7.5E-23 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily D172_008750 d5ccd4a842297241ac5244867a4498df 123 SUPERFAMILY SSF161084 3 120 7.98E-28 T 14-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily D172_001220 4b978f63897fba5f95f6d7f18ffdb99d 373 Gene3D G3DSA:2.40.50.100 295 365 2.4E-151 T 14-10-2018 D172_001220 4b978f63897fba5f95f6d7f18ffdb99d 373 Gene3D G3DSA:3.40.630.10 16 294 2.4E-151 T 14-10-2018 D172_001220 4b978f63897fba5f95f6d7f18ffdb99d 373 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 36 366 4.8E-54 T 14-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 D172_001220 4b978f63897fba5f95f6d7f18ffdb99d 373 SUPERFAMILY SSF53187 17 366 5.97E-42 T 14-10-2018 D172_020635 a69c4d7c79e1cdfe96c75a1578808b48 1339 SUPERFAMILY SSF52025 512 613 1.96E-13 T 14-10-2018 D172_020635 a69c4d7c79e1cdfe96c75a1578808b48 1339 Pfam PF02225 PA domain 516 611 5.4E-17 T 14-10-2018 IPR003137 PA domain D172_020635 a69c4d7c79e1cdfe96c75a1578808b48 1339 Pfam PF02128 Fungalysin metallopeptidase (M36) 346 833 1.2E-88 T 14-10-2018 IPR001842 Peptidase M36, fungalysin GO:0004222|GO:0005615|GO:0008270 D172_020635 a69c4d7c79e1cdfe96c75a1578808b48 1339 Gene3D G3DSA:3.50.30.30 516 636 4.9E-27 T 14-10-2018 D172_020635 a69c4d7c79e1cdfe96c75a1578808b48 1339 SUPERFAMILY SSF55486 356 831 2.81E-42 T 14-10-2018 D172_020635 a69c4d7c79e1cdfe96c75a1578808b48 1339 Gene3D G3DSA:2.60.40.3010 1213 1298 4.4E-11 T 14-10-2018 D172_020635 a69c4d7c79e1cdfe96c75a1578808b48 1339 Gene3D G3DSA:3.10.170.10 311 498 1.0E-44 T 14-10-2018 D172_020635 a69c4d7c79e1cdfe96c75a1578808b48 1339 Gene3D G3DSA:1.10.390.10 659 849 8.0E-50 T 14-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily D172_015500 2534876dd964f1b7d709894f9909fdca 127 SUPERFAMILY SSF82649 1 125 5.49E-48 T 14-10-2018 D172_015500 2534876dd964f1b7d709894f9909fdca 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 3.4E-67 T 14-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 D172_015500 2534876dd964f1b7d709894f9909fdca 127 Pfam PF01592 NifU-like N terminal domain 2 126 4.5E-56 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 D172_015500 2534876dd964f1b7d709894f9909fdca 127 Gene3D G3DSA:3.90.1010.10 1 127 8.5E-58 T 14-10-2018 D172_006900 e3249f80f28e1205d77d710f1cdf0e19 278 Pfam PF10972 Peptidoglycan-binding protein, CsiV 3 276 1.2E-61 T 14-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV D172_008485 70090aa580ebbb8dc936ebf68bdec97f 189 SUPERFAMILY SSF56925 29 189 3.92E-30 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel D172_008485 70090aa580ebbb8dc936ebf68bdec97f 189 Gene3D G3DSA:2.40.160.20 19 189 2.4E-36 T 14-10-2018 D172_008485 70090aa580ebbb8dc936ebf68bdec97f 189 Pfam PF13505 Outer membrane protein beta-barrel domain 10 189 1.7E-20 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel D172_008485 70090aa580ebbb8dc936ebf68bdec97f 189 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 99 175 3.6E-4 T 14-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 D172_010595 dbe87eab84067d23631cd875103292db 355 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 52 332 3.3E-62 T 14-10-2018 IPR006430 Phage portal protein PBSX family D172_010595 dbe87eab84067d23631cd875103292db 355 Pfam PF04860 Phage portal protein 88 321 2.9E-13 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein D172_009620 4bd746eba7ecf8475c4be9489524286e 405 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 405 4.9E-122 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 D172_009620 4bd746eba7ecf8475c4be9489524286e 405 Pfam PF02687 FtsX-like permease family 301 398 2.2E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 D172_009620 4bd746eba7ecf8475c4be9489524286e 405 Pfam PF12704 MacB-like periplasmic core domain 27 232 2.9E-12 T 14-10-2018 IPR025857 MacB-like periplasmic core domain D172_011860 a949c57501686b042f1e48056ea3fc65 289 Pfam PF03690 Uncharacterised protein family (UPF0160) 6 287 1.9E-78 T 14-10-2018 IPR003226 Metal-dependent protein hydrolase D172_011610 219c62470286dcf8d1895625ae9051ba 275 Gene3D G3DSA:3.30.420.10 107 243 5.9E-24 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_011610 219c62470286dcf8d1895625ae9051ba 275 Pfam PF00665 Integrase core domain 108 221 1.9E-27 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_011610 219c62470286dcf8d1895625ae9051ba 275 SUPERFAMILY SSF53098 101 260 1.64E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_020735 219c62470286dcf8d1895625ae9051ba 275 Gene3D G3DSA:3.30.420.10 107 243 5.9E-24 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_020735 219c62470286dcf8d1895625ae9051ba 275 Pfam PF00665 Integrase core domain 108 221 1.9E-27 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_020735 219c62470286dcf8d1895625ae9051ba 275 SUPERFAMILY SSF53098 101 260 1.64E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_012360 9d90800f9b880c31b05e53af9468d8c2 89 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 82 5.4E-22 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 D172_012360 9d90800f9b880c31b05e53af9468d8c2 89 PIRSF PIRSF028784 1 89 2.9E-29 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 D172_020280 e4c9bcf1f9969fc8955bd08316cf7e61 464 Pfam PF09594 Glycosyltransferase family 87 152 374 2.8E-6 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 D172_019180 04bb392ba7afa496faf89ceea0fd8254 318 SUPERFAMILY SSF56112 28 292 5.54E-19 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily D172_019180 04bb392ba7afa496faf89ceea0fd8254 318 Pfam PF02958 Ecdysteroid kinase 175 261 2.9E-10 T 14-10-2018 IPR004119 Protein of unknown function DUF227 D172_019180 04bb392ba7afa496faf89ceea0fd8254 318 Gene3D G3DSA:3.90.1200.10 116 310 5.0E-6 T 14-10-2018 D172_019180 04bb392ba7afa496faf89ceea0fd8254 318 SMART SM00587 106 263 1.9E-4 T 14-10-2018 IPR015897 CHK kinase-like D172_020765 e83ee9490f1dc426703e066a275febdb 100 Gene3D G3DSA:3.30.70.1290 1 100 6.2E-23 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D172_020765 e83ee9490f1dc426703e066a275febdb 100 SUPERFAMILY SSF143422 4 85 2.22E-19 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D172_020765 e83ee9490f1dc426703e066a275febdb 100 Pfam PF01797 Transposase IS200 like 2 78 9.1E-10 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D172_020765 e83ee9490f1dc426703e066a275febdb 100 SMART SM01321 1 79 3.2E-7 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D172_019410 a77dafeee21ccccd7a4cb5c030ab676d 233 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 13 231 1.1E-59 T 14-10-2018 IPR010239 Conserved hypothetical protein CHP02001 D172_019410 a77dafeee21ccccd7a4cb5c030ab676d 233 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 23 183 4.6E-19 T 14-10-2018 IPR010239 Conserved hypothetical protein CHP02001 D172_013640 84da615c310fc1f048e4bc86b8a78a15 197 PIRSF PIRSF028688 1 197 2.3E-24 T 14-10-2018 IPR014549 Flagellar protein FlgO D172_017565 0a1ba50ddbed59995bbae8514fb61002 496 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 493 4.4E-190 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath D172_017565 0a1ba50ddbed59995bbae8514fb61002 496 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 18 493 7.2E-207 T 14-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath D172_004785 af1a91585f3255258545a4812155d5d9 222 Gene3D G3DSA:3.30.530.20 31 214 1.0E-46 T 14-10-2018 IPR023393 START-like domain superfamily D172_004785 af1a91585f3255258545a4812155d5d9 222 Pfam PF01852 START domain 29 191 2.7E-9 T 14-10-2018 IPR002913 START domain GO:0008289 D172_004785 af1a91585f3255258545a4812155d5d9 222 SUPERFAMILY SSF55961 30 203 4.81E-29 T 14-10-2018 D172_004785 af1a91585f3255258545a4812155d5d9 222 PIRSF PIRSF039033 8 219 3.0E-40 T 14-10-2018 IPR028347 START domain-containing protein D172_015020 f3330a83cc49b491d4b7f3cacd668049 317 PIRSF PIRSF035875 7 306 3.4E-67 T 14-10-2018 IPR017039 Virulence factor BrkB D172_015020 f3330a83cc49b491d4b7f3cacd668049 317 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 25 284 1.6E-33 T 14-10-2018 IPR017039 Virulence factor BrkB D172_015020 f3330a83cc49b491d4b7f3cacd668049 317 Pfam PF03631 Virulence factor BrkB 34 288 3.8E-58 T 14-10-2018 IPR017039 Virulence factor BrkB D172_013420 48bf273a5cf080fd7865bce2789578a2 268 Pfam PF02108 Flagellar assembly protein FliH 131 257 3.1E-31 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE D172_013420 48bf273a5cf080fd7865bce2789578a2 268 PRINTS PR01003 Flagellar assembly protein FliH signature 153 170 1.6E-8 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 D172_013420 48bf273a5cf080fd7865bce2789578a2 268 PRINTS PR01003 Flagellar assembly protein FliH signature 91 113 1.6E-8 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 D172_013420 48bf273a5cf080fd7865bce2789578a2 268 PRINTS PR01003 Flagellar assembly protein FliH signature 223 239 1.6E-8 T 14-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 D172_013420 48bf273a5cf080fd7865bce2789578a2 268 SUPERFAMILY SSF160527 195 263 9.94E-5 T 14-10-2018 D172_002125 8a28467c492807496b6454ab55a56ddd 269 Pfam PF10977 Protein of unknown function (DUF2797) 34 266 8.9E-98 T 14-10-2018 IPR021246 Protein of unknown function DUF2797 D172_001115 48f93f2db0fb6a5a0a7d7d6304da6322 173 Pfam PF13511 Domain of unknown function (DUF4124) 71 104 1.9E-7 T 14-10-2018 IPR025392 Domain of unknown function DUF4124 D172_013300 3135c3c9188d65eaf680ad5d9d4abc7f 164 SMART SM00260 16 153 7.1E-51 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D172_013300 3135c3c9188d65eaf680ad5d9d4abc7f 164 Pfam PF01584 CheW-like domain 20 156 5.5E-39 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 D172_013300 3135c3c9188d65eaf680ad5d9d4abc7f 164 SUPERFAMILY SSF50341 15 158 9.81E-42 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 D172_013300 3135c3c9188d65eaf680ad5d9d4abc7f 164 Gene3D G3DSA:2.30.30.40 22 147 1.1E-43 T 14-10-2018 D172_013300 3135c3c9188d65eaf680ad5d9d4abc7f 164 Gene3D G3DSA:2.40.50.180 39 148 1.1E-43 T 14-10-2018 D172_015230 87536f3106698758bf34181214769e13 480 Gene3D G3DSA:2.40.160.130 34 462 1.1E-44 T 14-10-2018 IPR038636 Capsule assembly protein Wzi superfamily D172_015230 87536f3106698758bf34181214769e13 480 Pfam PF14052 Capsule assembly protein Wzi 96 433 9.8E-38 T 14-10-2018 IPR026950 Capsule assembly protein Wzi D172_004840 9b58a2e8b9829471e50bf64b21330a61 144 PIRSF PIRSF004638 1 144 1.4E-46 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 D172_004840 9b58a2e8b9829471e50bf64b21330a61 144 Pfam PF03653 Uncharacterised protein family (UPF0093) 7 142 1.8E-45 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 D172_000625 e5b3e5dba994693260a3d5321631bdc6 121 Pfam PF09685 Domain of unknown function (DUF4870) 14 120 3.2E-40 T 14-10-2018 IPR019109 Protein of unknown function DUF4870 D172_014190 c775671c856c9f10bbba7f815e61e21e 196 Gene3D G3DSA:3.40.50.10490 6 191 2.2E-63 T 14-10-2018 D172_014190 c775671c856c9f10bbba7f815e61e21e 196 SUPERFAMILY SSF53697 18 189 2.63E-46 T 14-10-2018 D172_014190 c775671c856c9f10bbba7f815e61e21e 196 Pfam PF13580 SIS domain 17 149 8.5E-23 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 D172_001300 4b0aed79bfd554544f76c81a275df60a 294 Pfam PF00149 Calcineurin-like phosphoesterase 28 243 9.9E-19 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 D172_001300 4b0aed79bfd554544f76c81a275df60a 294 Gene3D G3DSA:3.60.21.10 24 286 9.1E-72 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like D172_001300 4b0aed79bfd554544f76c81a275df60a 294 SUPERFAMILY SSF56300 26 285 3.93E-55 T 14-10-2018 D172_011395 d4b267ae402305f6c4571f4b5ccf2771 178 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 4 117 5.7E-18 T 14-10-2018 IPR015032 MTH538 TIR-like domain D172_007085 dd78f28bd837406651da2b6a803e19b1 619 SUPERFAMILY SSF56300 136 512 2.56E-9 T 14-10-2018 D172_007085 dd78f28bd837406651da2b6a803e19b1 619 Gene3D G3DSA:3.60.21.70 270 537 1.7E-7 T 14-10-2018 IPR038607 PhoD-like superfamily D172_007085 dd78f28bd837406651da2b6a803e19b1 619 Pfam PF09423 PhoD-like phosphatase 294 536 1.0E-6 T 14-10-2018 IPR018946 Alkaline phosphatase D-related D172_009425 bbfb3b0dc66ac5b7df7b9fa25f22fe8f 128 Pfam PF03692 Putative zinc- or iron-chelating domain 3 93 2.9E-8 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein D172_010395 9f40c6868303587f9a1b3eb425c81428 508 SUPERFAMILY SSF103473 20 488 9.02E-33 T 14-10-2018 IPR036259 MFS transporter superfamily D172_010395 9f40c6868303587f9a1b3eb425c81428 508 Gene3D G3DSA:1.20.1250.20 17 277 2.9E-14 T 14-10-2018 D172_010395 9f40c6868303587f9a1b3eb425c81428 508 Pfam PF13347 MFS/sugar transport protein 241 490 9.5E-39 T 14-10-2018 D172_010395 9f40c6868303587f9a1b3eb425c81428 508 Pfam PF13347 MFS/sugar transport protein 11 232 1.8E-57 T 14-10-2018 D172_010395 9f40c6868303587f9a1b3eb425c81428 508 Gene3D G3DSA:1.20.1250.20 281 496 5.5E-13 T 14-10-2018 D172_015405 b15270100ab842ceefbd8302b0382cf3 361 Gene3D G3DSA:3.90.25.10 207 336 2.7E-132 T 14-10-2018 D172_015405 b15270100ab842ceefbd8302b0382cf3 361 Gene3D G3DSA:3.40.50.720 2 327 2.7E-132 T 14-10-2018 D172_015405 b15270100ab842ceefbd8302b0382cf3 361 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 328 3.9E-92 T 14-10-2018 IPR016040 NAD(P)-binding domain D172_015405 b15270100ab842ceefbd8302b0382cf3 361 SUPERFAMILY SSF51735 1 349 1.24E-90 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_015405 b15270100ab842ceefbd8302b0382cf3 361 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 342 1.4E-151 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 D172_017935 a02ec68805c3b054dbb2f96ded2a93bb 533 SUPERFAMILY SSF56235 3 523 1.16E-129 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal D172_017935 a02ec68805c3b054dbb2f96ded2a93bb 533 Gene3D G3DSA:1.10.246.130 231 334 1.0E-10 T 14-10-2018 D172_017935 a02ec68805c3b054dbb2f96ded2a93bb 533 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 116 135 3.2E-21 T 14-10-2018 D172_017935 a02ec68805c3b054dbb2f96ded2a93bb 533 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 28 53 3.2E-21 T 14-10-2018 D172_017935 a02ec68805c3b054dbb2f96ded2a93bb 533 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 395 410 3.2E-21 T 14-10-2018 D172_017935 a02ec68805c3b054dbb2f96ded2a93bb 533 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 358 376 3.2E-21 T 14-10-2018 D172_017935 a02ec68805c3b054dbb2f96ded2a93bb 533 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 243 262 3.2E-21 T 14-10-2018 D172_017935 a02ec68805c3b054dbb2f96ded2a93bb 533 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 214 230 3.2E-21 T 14-10-2018 D172_017935 a02ec68805c3b054dbb2f96ded2a93bb 533 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 334 352 3.2E-21 T 14-10-2018 D172_017935 a02ec68805c3b054dbb2f96ded2a93bb 533 Pfam PF01019 Gamma-glutamyltranspeptidase 21 520 9.1E-117 T 14-10-2018 D172_017935 a02ec68805c3b054dbb2f96ded2a93bb 533 Gene3D G3DSA:3.60.20.40 335 524 1.7E-52 T 14-10-2018 D172_020885 a38a18c5e226e482a535997305901c86 499 SUPERFAMILY SSF53474 80 144 6.7E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_020885 a38a18c5e226e482a535997305901c86 499 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 139 236 9.9E-21 T 14-10-2018 IPR018712 Domain of unknown function DUF2235 D172_020885 a38a18c5e226e482a535997305901c86 499 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 4 130 3.9E-13 T 14-10-2018 IPR018712 Domain of unknown function DUF2235 D172_012985 4e74075335b4a0175ff391d09d5e6a9f 740 SUPERFAMILY SSF56935 32 717 7.0E-107 T 14-10-2018 D172_012985 4e74075335b4a0175ff391d09d5e6a9f 740 Pfam PF00593 TonB dependent receptor 279 710 7.5E-31 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel D172_012985 4e74075335b4a0175ff391d09d5e6a9f 740 Gene3D G3DSA:2.40.170.20 40 739 3.0E-129 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily D172_012985 4e74075335b4a0175ff391d09d5e6a9f 740 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 159 2.7E-17 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain D172_000925 ff671b3dec293a125978b0e8d3754397 151 SUPERFAMILY SSF51283 1 150 1.09E-51 T 14-10-2018 IPR036157 dUTPase-like superfamily D172_000925 ff671b3dec293a125978b0e8d3754397 151 Pfam PF00692 dUTPase 16 149 1.9E-38 T 14-10-2018 IPR029054 dUTPase-like D172_000925 ff671b3dec293a125978b0e8d3754397 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 149 1.1E-46 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 D172_000925 ff671b3dec293a125978b0e8d3754397 151 Gene3D G3DSA:2.70.40.10 1 150 2.5E-53 T 14-10-2018 IPR036157 dUTPase-like superfamily D172_000925 ff671b3dec293a125978b0e8d3754397 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 32.583 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 D172_015200 da799c860abf140ef9875ded30b8a38b 428 Pfam PF12704 MacB-like periplasmic core domain 19 212 4.2E-12 T 14-10-2018 IPR025857 MacB-like periplasmic core domain D172_015200 da799c860abf140ef9875ded30b8a38b 428 Pfam PF02687 FtsX-like permease family 326 415 1.6E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 D172_013905 d6293652460e98db0e850aa3757f4fc0 300 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 174 296 4.7E-30 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain D172_013905 d6293652460e98db0e850aa3757f4fc0 300 Gene3D G3DSA:1.10.1040.10 174 299 1.7E-33 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 D172_013905 d6293652460e98db0e850aa3757f4fc0 300 Gene3D G3DSA:3.40.50.720 2 173 6.7E-36 T 14-10-2018 D172_013905 d6293652460e98db0e850aa3757f4fc0 300 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 146 2.2E-22 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain D172_013905 d6293652460e98db0e850aa3757f4fc0 300 SUPERFAMILY SSF51735 3 171 3.49E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_013905 d6293652460e98db0e850aa3757f4fc0 300 SUPERFAMILY SSF48179 174 296 6.12E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 D172_013905 d6293652460e98db0e850aa3757f4fc0 300 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 297 5.0E-59 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 D172_004020 04545d3f4abddae04fbff4dff8b7bfeb 355 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 352 5.9E-67 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 D172_004020 04545d3f4abddae04fbff4dff8b7bfeb 355 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 353 1.1E-131 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 D172_004655 a3b7c801624d4d13d09adc3077ac9f23 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 16 157 3.2E-47 T 14-10-2018 IPR008136 CinA, C-terminal D172_004655 a3b7c801624d4d13d09adc3077ac9f23 162 SUPERFAMILY SSF142433 4 160 1.44E-54 T 14-10-2018 IPR036653 CinA-like, C-terminal D172_004655 a3b7c801624d4d13d09adc3077ac9f23 162 Gene3D G3DSA:3.90.950.20 1 161 8.5E-57 T 14-10-2018 IPR036653 CinA-like, C-terminal D172_004655 a3b7c801624d4d13d09adc3077ac9f23 162 Pfam PF02464 Competence-damaged protein 8 159 5.0E-54 T 14-10-2018 IPR008136 CinA, C-terminal D172_003325 a7b34a6390d03ea018c354100734901f 352 Gene3D G3DSA:1.10.443.10 179 352 1.2E-24 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 D172_003325 a7b34a6390d03ea018c354100734901f 352 Pfam PF00589 Phage integrase family 184 344 1.3E-15 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 D172_003325 a7b34a6390d03ea018c354100734901f 352 SUPERFAMILY SSF56349 69 352 6.83E-45 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D172_006090 36a39ce2c5409d9f9576d3be9fef2e76 342 Pfam PF12069 Protein of unknown function (DUF3549) 4 341 1.2E-125 T 14-10-2018 IPR021936 Protein of unknown function DUF3549 D172_009280 b9912c9340a35cb603f692f989d853ba 761 SUPERFAMILY SSF51905 16 411 4.54E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_009280 b9912c9340a35cb603f692f989d853ba 761 Pfam PF12831 FAD dependent oxidoreductase 23 436 2.8E-94 T 14-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal D172_009280 b9912c9340a35cb603f692f989d853ba 761 Gene3D G3DSA:3.50.50.60 1 197 3.4E-12 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily D172_013900 154b45ed650e082604ecb9874fe4eb4a 117 Pfam PF04892 VanZ like family 26 107 3.0E-7 T 14-10-2018 IPR006976 VanZ-like D172_012285 1f12a14cf54b609b2ecc8cda1244cf6f 276 Gene3D G3DSA:2.60.120.620 5 214 7.7E-24 T 14-10-2018 D172_012285 1f12a14cf54b609b2ecc8cda1244cf6f 276 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 63 200 1.8E-14 T 14-10-2018 IPR008775 Phytanoyl-CoA dioxygenase D172_012285 1f12a14cf54b609b2ecc8cda1244cf6f 276 SUPERFAMILY SSF51197 20 210 4.27E-23 T 14-10-2018 D172_019080 7bf34676d09dda7183c35e92a4fae8b3 204 Pfam PF12804 MobA-like NTP transferase domain 6 165 5.9E-31 T 14-10-2018 IPR025877 MobA-like NTP transferase D172_019080 7bf34676d09dda7183c35e92a4fae8b3 204 SUPERFAMILY SSF53448 6 193 5.63E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_019080 7bf34676d09dda7183c35e92a4fae8b3 204 Gene3D G3DSA:3.90.550.10 3 199 4.9E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_011265 f10b458b758689b778ea653927c29935 98 Gene3D G3DSA:2.40.10.220 2 98 1.3E-8 T 14-10-2018 D172_011265 f10b458b758689b778ea653927c29935 98 Pfam PF07238 PilZ domain 6 94 1.6E-10 T 14-10-2018 IPR009875 PilZ domain GO:0035438 D172_011265 f10b458b758689b778ea653927c29935 98 SUPERFAMILY SSF141371 3 84 1.0E-11 T 14-10-2018 D172_018300 af9e0c7ec4ad764692222a329fcc6c92 349 Gene3D G3DSA:2.160.20.10 27 328 4.4E-31 T 14-10-2018 IPR012334 Pectin lyase fold D172_018300 af9e0c7ec4ad764692222a329fcc6c92 349 Pfam PF01095 Pectinesterase 39 208 1.7E-10 T 14-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 D172_018300 af9e0c7ec4ad764692222a329fcc6c92 349 SUPERFAMILY SSF51126 26 327 1.0E-24 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor D172_007345 ec0600a547ff7f9b84df31793a6fdd79 358 Gene3D G3DSA:3.40.50.2000 167 340 4.4E-58 T 14-10-2018 D172_007345 ec0600a547ff7f9b84df31793a6fdd79 358 Gene3D G3DSA:3.40.50.2000 55 353 4.4E-58 T 14-10-2018 D172_007345 ec0600a547ff7f9b84df31793a6fdd79 358 Pfam PF00534 Glycosyl transferases group 1 181 327 1.2E-28 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 D172_007345 ec0600a547ff7f9b84df31793a6fdd79 358 Pfam PF13439 Glycosyltransferase Family 4 46 139 2.2E-12 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 D172_007345 ec0600a547ff7f9b84df31793a6fdd79 358 SUPERFAMILY SSF53756 3 355 1.84E-58 T 14-10-2018 D172_012865 e246a7ada7a30181a8a91b297b2557a3 199 Pfam PF06930 Protein of unknown function (DUF1282) 9 180 6.6E-47 T 14-10-2018 IPR009698 Protein of unknown function DUF1282 D172_013280 6cedf886bdac077e8a30e0381b939b40 176 Gene3D G3DSA:3.40.50.300 1 170 1.8E-32 T 14-10-2018 D172_013280 6cedf886bdac077e8a30e0381b939b40 176 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 163 1.4E-59 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 D172_013280 6cedf886bdac077e8a30e0381b939b40 176 SUPERFAMILY SSF52540 3 158 8.61E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_013280 6cedf886bdac077e8a30e0381b939b40 176 Pfam PF00005 ABC transporter 2 127 2.0E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_013280 6cedf886bdac077e8a30e0381b939b40 176 ProSitePatterns PS00211 ABC transporters family signature. 100 114 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_010460 6998fa1837fc78d9ee3555bcf7c6526b 416 Pfam PF00999 Sodium/hydrogen exchanger family 15 411 1.1E-56 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 D172_010460 6998fa1837fc78d9ee3555bcf7c6526b 416 Gene3D G3DSA:1.20.1530.20 8 414 1.4E-13 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily D172_006500 a02b8ae02ae2a03d05e83ccd4406fe51 434 SUPERFAMILY SSF56112 98 307 1.33E-15 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily D172_006500 a02b8ae02ae2a03d05e83ccd4406fe51 434 Pfam PF03109 ABC1 family 114 229 4.1E-27 T 14-10-2018 IPR004147 UbiB domain D172_018945 1a1394943494342b95e046dde07b2ae1 292 SUPERFAMILY SSF53850 87 268 5.12E-5 T 14-10-2018 D172_011355 db4eca474c69d6b97d5373039cdba14e 178 Gene3D G3DSA:2.40.160.20 34 176 3.8E-36 T 14-10-2018 D172_011355 db4eca474c69d6b97d5373039cdba14e 178 PIRSF PIRSF029681 1 178 5.8E-50 T 14-10-2018 IPR018550 Lipid A 3-O-deacylase-related D172_011355 db4eca474c69d6b97d5373039cdba14e 178 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 45 175 2.5E-30 T 14-10-2018 IPR018550 Lipid A 3-O-deacylase-related D172_018905 0a73c5246531f6eb0b131f49ee9cb2c7 100 Pfam PF07383 Protein of unknown function (DUF1496) 30 82 1.1E-17 T 14-10-2018 IPR009971 Protein of unknown function DUF1496 D172_016085 1629c0ca3a0f295e07ee27d85a5a955a 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 D172_016085 1629c0ca3a0f295e07ee27d85a5a955a 220 Gene3D G3DSA:3.40.1050.10 1 209 1.8E-84 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 D172_016085 1629c0ca3a0f295e07ee27d85a5a955a 220 SMART SM00947 30 192 4.6E-73 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 D172_016085 1629c0ca3a0f295e07ee27d85a5a955a 220 Pfam PF00484 Carbonic anhydrase 37 187 1.1E-53 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 D172_016085 1629c0ca3a0f295e07ee27d85a5a955a 220 SUPERFAMILY SSF53056 2 210 3.92E-76 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 D172_016085 1629c0ca3a0f295e07ee27d85a5a955a 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 14-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 D172_001095 fa10d6a7d06e3909a6d65aa9b432ae66 545 SUPERFAMILY SSF54060 301 539 4.47E-46 T 14-10-2018 D172_001095 fa10d6a7d06e3909a6d65aa9b432ae66 545 Gene3D G3DSA:2.60.120.260 25 164 2.0E-15 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_001095 fa10d6a7d06e3909a6d65aa9b432ae66 545 Pfam PF04231 Endonuclease I 303 539 1.9E-99 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 D172_001095 fa10d6a7d06e3909a6d65aa9b432ae66 545 Pfam PF02018 Carbohydrate binding domain 26 146 1.8E-8 T 14-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 D172_001095 fa10d6a7d06e3909a6d65aa9b432ae66 545 SUPERFAMILY SSF49785 26 163 7.48E-19 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily D172_013290 dc817dae9ba4451725aaa369541f3926 102 Gene3D G3DSA:3.40.1690.10 7 85 4.0E-17 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal D172_013290 dc817dae9ba4451725aaa369541f3926 102 Pfam PF01312 FlhB HrpN YscU SpaS Family 9 79 1.2E-13 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 D172_013290 dc817dae9ba4451725aaa369541f3926 102 SUPERFAMILY SSF160544 8 83 7.59E-17 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal D172_017695 f0975904a0c719d05ad1f2be3e99933e 169 SUPERFAMILY SSF75169 44 169 7.77E-19 T 14-10-2018 IPR027396 DsrEFH-like D172_017695 f0975904a0c719d05ad1f2be3e99933e 169 Pfam PF02635 DsrE/DsrF-like family 49 165 4.8E-13 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein D172_017695 f0975904a0c719d05ad1f2be3e99933e 169 Gene3D G3DSA:3.40.1260.10 41 166 5.4E-9 T 14-10-2018 IPR027396 DsrEFH-like D172_009120 faea91ab5e65c73a6d87cfa2abc8a46f 526 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 2.4E-177 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 D172_009120 faea91ab5e65c73a6d87cfa2abc8a46f 526 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 14-10-2018 IPR018093 BCCT transporter, conserved site D172_009120 faea91ab5e65c73a6d87cfa2abc8a46f 526 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 75 520 5.8E-140 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 D172_002570 55277c90c547a909e419e40d7036f3bb 748 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 7 723 19.417 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 D172_002570 55277c90c547a909e419e40d7036f3bb 748 Pfam PF03968 OstA-like protein 50 180 1.4E-8 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal D172_002570 55277c90c547a909e419e40d7036f3bb 748 Pfam PF04453 Organic solvent tolerance protein 288 654 6.5E-85 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 D172_002005 965a1289321717df73ebba7bc49c9cdf 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 60 78 6.8E-16 T 14-10-2018 IPR003849 Preprotein translocase YajC D172_002005 965a1289321717df73ebba7bc49c9cdf 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 22 42 6.8E-16 T 14-10-2018 IPR003849 Preprotein translocase YajC D172_002005 965a1289321717df73ebba7bc49c9cdf 112 SMART SM01323 20 104 4.5E-37 T 14-10-2018 IPR003849 Preprotein translocase YajC D172_002005 965a1289321717df73ebba7bc49c9cdf 112 Pfam PF02699 Preprotein translocase subunit 23 101 8.5E-26 T 14-10-2018 IPR003849 Preprotein translocase YajC D172_002005 965a1289321717df73ebba7bc49c9cdf 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 21 104 1.5E-29 T 14-10-2018 IPR003849 Preprotein translocase YajC D172_014975 1f1065e49f93618e8b17db5642255a34 109 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 24 106 2.5E-19 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 D172_014975 1f1065e49f93618e8b17db5642255a34 109 Pfam PF04999 Cell division protein FtsL 18 107 1.1E-28 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 D172_014975 1f1065e49f93618e8b17db5642255a34 109 Hamap MF_00910 Cell division protein FtsL [ftsL]. 23 106 15.509 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 D172_009255 7bd6917645eb3475ccf9e2233300a940 744 Pfam PF02449 Beta-galactosidase 450 622 2.2E-5 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 D172_009255 7bd6917645eb3475ccf9e2233300a940 744 Gene3D G3DSA:2.60.120.430 8 187 4.5E-48 T 14-10-2018 D172_009255 7bd6917645eb3475ccf9e2233300a940 744 Gene3D G3DSA:3.20.20.80 189 737 2.3E-189 T 14-10-2018 D172_009255 7bd6917645eb3475ccf9e2233300a940 744 SUPERFAMILY SSF51445 385 727 1.13E-28 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily D172_001630 9fe7e2c1d157c43d6e1e8f1e4ab672ae 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001630 9fe7e2c1d157c43d6e1e8f1e4ab672ae 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001630 9fe7e2c1d157c43d6e1e8f1e4ab672ae 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001630 9fe7e2c1d157c43d6e1e8f1e4ab672ae 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001630 9fe7e2c1d157c43d6e1e8f1e4ab672ae 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001630 9fe7e2c1d157c43d6e1e8f1e4ab672ae 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.7E-60 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001630 9fe7e2c1d157c43d6e1e8f1e4ab672ae 124 PIRSF PIRSF002133 1 124 5.0E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001630 9fe7e2c1d157c43d6e1e8f1e4ab672ae 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001630 9fe7e2c1d157c43d6e1e8f1e4ab672ae 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 3.4E-43 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 D172_001630 9fe7e2c1d157c43d6e1e8f1e4ab672ae 124 Gene3D G3DSA:2.40.50.140 1 124 2.1E-62 T 14-10-2018 D172_001630 9fe7e2c1d157c43d6e1e8f1e4ab672ae 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.521 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001630 9fe7e2c1d157c43d6e1e8f1e4ab672ae 124 SUPERFAMILY SSF50249 3 123 6.17E-51 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold D172_001630 9fe7e2c1d157c43d6e1e8f1e4ab672ae 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 1.4E-69 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 D172_001020 6ef4c8d6d33a335003e28133f78e29ec 153 Gene3D G3DSA:3.10.590.10 1 153 2.5E-59 T 14-10-2018 D172_001020 6ef4c8d6d33a335003e28133f78e29ec 153 Pfam PF01878 EVE domain 2 150 9.9E-51 T 14-10-2018 IPR002740 EVE domain D172_001020 6ef4c8d6d33a335003e28133f78e29ec 153 SUPERFAMILY SSF88697 1 151 3.07E-56 T 14-10-2018 IPR015947 PUA-like superfamily D172_011250 15f9827db52c88d3c08ba9f03efb8c6d 151 Gene3D G3DSA:3.10.180.10 2 133 1.1E-17 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_011250 15f9827db52c88d3c08ba9f03efb8c6d 151 SUPERFAMILY SSF54593 1 120 6.04E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase D172_011250 15f9827db52c88d3c08ba9f03efb8c6d 151 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 116 1.3E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain D172_018620 ed57b30684f3c70aaf2fec797db38b3b 375 SMART SM00829 17 323 4.9E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 D172_018620 ed57b30684f3c70aaf2fec797db38b3b 375 SUPERFAMILY SSF51735 146 263 9.6E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_018620 ed57b30684f3c70aaf2fec797db38b3b 375 Gene3D G3DSA:3.40.50.720 153 340 1.6E-147 T 14-10-2018 D172_018620 ed57b30684f3c70aaf2fec797db38b3b 375 SUPERFAMILY SSF50129 16 180 4.91E-22 T 14-10-2018 IPR011032 GroES-like superfamily D172_018620 ed57b30684f3c70aaf2fec797db38b3b 375 Gene3D G3DSA:3.90.180.10 7 373 1.6E-147 T 14-10-2018 D172_011890 d893228334f80c98a7ac3633616b78c1 215 Gene3D G3DSA:3.40.50.1820 14 193 2.7E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_011890 d893228334f80c98a7ac3633616b78c1 215 SUPERFAMILY SSF53474 14 144 1.45E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_020195 c904c10bf865099d0639c16657da34c0 291 Gene3D G3DSA:3.50.14.10 11 272 1.9E-52 T 14-10-2018 IPR036381 Replication terminator Tus, domain 1 GO:0003677|GO:0005737|GO:0006274 D172_020195 c904c10bf865099d0639c16657da34c0 291 Gene3D G3DSA:3.30.54.10 165 286 1.9E-52 T 14-10-2018 D172_020195 c904c10bf865099d0639c16657da34c0 291 SUPERFAMILY SSF56596 19 287 3.01E-48 T 14-10-2018 IPR036384 Replication terminator Tus superfamily GO:0003677|GO:0005737|GO:0006274 D172_020195 c904c10bf865099d0639c16657da34c0 291 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 6 286 1.6E-83 T 14-10-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 D172_017375 7f73e85a7eb6e78604f6cd1f204ba8ae 300 Pfam PF02371 Transposase IS116/IS110/IS902 family 157 241 1.2E-15 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D172_020315 062c2e74beb785fe6daf2082297f34fd 323 Gene3D G3DSA:1.25.40.10 57 320 5.0E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_004605 052b1445ea6a8af266c26ace223876ce 95 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 33.826 T 14-10-2018 IPR023081 Cell division protein FtsB D172_004605 052b1445ea6a8af266c26ace223876ce 95 Pfam PF04977 Septum formation initiator 11 87 8.1E-23 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC D172_014855 092c15c7b8480d4588fe7c40088e0c43 162 SUPERFAMILY SSF55729 1 159 1.4E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_014855 092c15c7b8480d4588fe7c40088e0c43 162 Pfam PF13420 Acetyltransferase (GNAT) domain 4 143 1.8E-19 T 14-10-2018 D172_014855 092c15c7b8480d4588fe7c40088e0c43 162 Gene3D G3DSA:3.40.630.30 1 162 1.9E-39 T 14-10-2018 D172_010210 7ef1e3c390530566b1f2df963d2b5fb8 445 Gene3D G3DSA:1.10.287.130 193 295 3.9E-8 T 14-10-2018 D172_010210 7ef1e3c390530566b1f2df963d2b5fb8 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 2.2E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_010210 7ef1e3c390530566b1f2df963d2b5fb8 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 420 4.6E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_010210 7ef1e3c390530566b1f2df963d2b5fb8 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 385 4.6E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 D172_010210 7ef1e3c390530566b1f2df963d2b5fb8 445 SUPERFAMILY SSF55874 300 437 1.83E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_010210 7ef1e3c390530566b1f2df963d2b5fb8 445 SMART SM00387 337 443 3.0E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase D172_010210 7ef1e3c390530566b1f2df963d2b5fb8 445 Gene3D G3DSA:3.30.565.10 296 444 1.9E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_006655 27d8520497ae2729fc7a724961c0c032 143 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 3 137 29.865 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 D172_006655 27d8520497ae2729fc7a724961c0c032 143 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 137 1.9E-23 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 D172_006655 27d8520497ae2729fc7a724961c0c032 143 TIGRFAM TIGR02801 tolR: protein TolR 10 137 2.5E-39 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 D172_006655 27d8520497ae2729fc7a724961c0c032 143 Gene3D G3DSA:3.30.420.270 57 129 6.1E-22 T 14-10-2018 D172_019585 a16f95ab12c1cccd3456876d3441493a 563 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 45 134 2.8E-28 T 14-10-2018 IPR032093 Phospholipase D, N-terminal D172_019585 a16f95ab12c1cccd3456876d3441493a 563 Gene3D G3DSA:2.60.40.380 36 136 2.8E-31 T 14-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 D172_019585 a16f95ab12c1cccd3456876d3441493a 563 Pfam PF09423 PhoD-like phosphatase 145 540 1.7E-124 T 14-10-2018 IPR018946 Alkaline phosphatase D-related D172_019585 a16f95ab12c1cccd3456876d3441493a 563 SUPERFAMILY SSF56300 142 544 4.27E-33 T 14-10-2018 D172_005720 04971d2eb0b0483a963878d21a6f7429 169 Pfam PF13302 Acetyltransferase (GNAT) domain 7 143 1.4E-21 T 14-10-2018 IPR000182 GNAT domain D172_005720 04971d2eb0b0483a963878d21a6f7429 169 SUPERFAMILY SSF55729 2 167 2.38E-32 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_005720 04971d2eb0b0483a963878d21a6f7429 169 Gene3D G3DSA:3.40.630.30 1 167 3.6E-32 T 14-10-2018 D172_004095 8cba87a01d9f21a040cd2dd0c24eecbb 80 Gene3D G3DSA:2.60.40.10 1 78 1.8E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_004095 8cba87a01d9f21a040cd2dd0c24eecbb 80 Pfam PF16158 Ig-like domain from next to BRCA1 gene 6 67 1.8E-6 T 14-10-2018 IPR032350 Next to BRCA1, central domain D172_003890 2bacbbd26268eb8be8e44f2ec8b8955a 226 SUPERFAMILY SSF52964 67 148 1.31E-6 T 14-10-2018 D172_003890 2bacbbd26268eb8be8e44f2ec8b8955a 226 Pfam PF03783 Curli production assembly/transport component CsgG 47 224 6.0E-28 T 14-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 D172_009290 aecc54778e3d8ae0212b5de166156034 561 Pfam PF00474 Sodium:solute symporter family 33 401 6.0E-39 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 D172_009290 aecc54778e3d8ae0212b5de166156034 561 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 147 172 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site D172_009290 aecc54778e3d8ae0212b5de166156034 561 Gene3D G3DSA:1.20.1730.10 22 491 2.6E-97 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily D172_013245 84548dfbff15bca8f8d466c1a7dc365f 153 Gene3D G3DSA:1.10.8.640 19 104 4.0E-31 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily D172_013245 84548dfbff15bca8f8d466c1a7dc365f 153 Pfam PF03918 Cytochrome C biogenesis protein 8 141 1.5E-47 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family D172_010615 e612bbaba8e4635607b351a772afcc88 81 Gene3D G3DSA:1.10.10.2690 1 78 8.9E-10 T 14-10-2018 D172_018690 5a668c75424b12ae8a1d1fc2a9b75cb5 160 Pfam PF00583 Acetyltransferase (GNAT) family 38 138 7.4E-19 T 14-10-2018 IPR000182 GNAT domain D172_018690 5a668c75424b12ae8a1d1fc2a9b75cb5 160 Gene3D G3DSA:3.40.630.30 2 160 3.7E-46 T 14-10-2018 D172_018690 5a668c75424b12ae8a1d1fc2a9b75cb5 160 SUPERFAMILY SSF55729 5 156 3.04E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_004595 b75f1c3574fcd362b5e3db41af8ef3f4 159 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 1.3E-60 T 14-10-2018 IPR021334 Protein of unknown function DUF2947 D172_005785 3ba13176a8b701aab1bc58ee92dc6667 352 Pfam PF16261 Domain of unknown function (DUF4915) 1 334 4.7E-92 T 14-10-2018 IPR017481 Conserved hypothetical protein CHP03032 D172_005785 3ba13176a8b701aab1bc58ee92dc6667 352 SUPERFAMILY SSF101898 108 330 1.05E-10 T 14-10-2018 D172_005785 3ba13176a8b701aab1bc58ee92dc6667 352 TIGRFAM TIGR03032 TIGR03032: TIGR03032 family protein 1 345 4.5E-96 T 14-10-2018 IPR017481 Conserved hypothetical protein CHP03032 D172_011145 23b018dd5ac3360a08dd5eb643bfd0d2 250 Gene3D G3DSA:3.40.1390.30 97 221 7.8E-81 T 14-10-2018 D172_011145 23b018dd5ac3360a08dd5eb643bfd0d2 250 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 236 6.6E-59 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 D172_011145 23b018dd5ac3360a08dd5eb643bfd0d2 250 Gene3D G3DSA:3.40.1390.30 14 234 7.8E-81 T 14-10-2018 D172_011145 23b018dd5ac3360a08dd5eb643bfd0d2 250 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 249 5.8E-68 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 D172_011145 23b018dd5ac3360a08dd5eb643bfd0d2 250 SUPERFAMILY SSF102705 1 249 2.88E-78 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily D172_006985 793764ae495e2e9a10a08d4de7c7967d 498 Pfam PF11893 Domain of unknown function (DUF3413) 7 251 5.1E-75 T 14-10-2018 IPR024588 Inner membrane protein YejM, N-terminal D172_012355 b7a51d8537b05613f12c547e330aa937 110 Pfam PF03334 Na+/H+ antiporter subunit 10 90 6.3E-25 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 D172_012355 b7a51d8537b05613f12c547e330aa937 110 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 9 98 7.0E-24 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 D172_009760 2491f3d9c65c7d55e2d8ee3a33d8861c 374 Pfam PF04116 Fatty acid hydroxylase superfamily 206 339 1.6E-31 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 D172_006785 a4f37d26ac303a1d0329b9b68c56a671 375 SUPERFAMILY SSF53649 24 361 9.42E-25 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 D172_006785 a4f37d26ac303a1d0329b9b68c56a671 375 Gene3D G3DSA:3.40.720.10 19 373 5.5E-26 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 D172_006785 a4f37d26ac303a1d0329b9b68c56a671 375 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 207 293 1.2E-8 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 D172_005480 55ce2e001af691d5fa18b700996b9e28 344 Pfam PF14501 GHKL domain 246 337 1.0E-4 T 14-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain D172_005480 55ce2e001af691d5fa18b700996b9e28 344 Pfam PF06580 Histidine kinase 152 229 2.3E-20 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 D172_005480 55ce2e001af691d5fa18b700996b9e28 344 Gene3D G3DSA:3.30.565.10 204 339 2.7E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily D172_017960 9f30a74c4241ea2acc4619d3a4584cbb 171 SUPERFAMILY SSF48403 51 166 7.15E-27 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily D172_017960 9f30a74c4241ea2acc4619d3a4584cbb 171 Gene3D G3DSA:1.25.40.20 2 170 9.9E-27 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily D172_017960 9f30a74c4241ea2acc4619d3a4584cbb 171 Pfam PF12796 Ankyrin repeats (3 copies) 45 108 1.2E-7 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain D172_017960 9f30a74c4241ea2acc4619d3a4584cbb 171 SMART SM00248 78 107 0.01 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 D172_017960 9f30a74c4241ea2acc4619d3a4584cbb 171 SMART SM00248 111 141 34.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 D172_017960 9f30a74c4241ea2acc4619d3a4584cbb 171 SMART SM00248 42 74 2900.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 D172_002635 be211e4342b0221319d6835e95372600 81 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 9.9E-18 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 D172_018450 c32e79e8a81aeb5baaa082f4447a658b 126 Pfam PF12395 Protein of unknown function 49 121 5.3E-9 T 14-10-2018 IPR022123 Protein of unknown function DUF3658 D172_019340 9b829b3f15ec928999e2ce16bc59e4bd 142 Pfam PF03061 Thioesterase superfamily 24 88 4.6E-5 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 D172_019340 9b829b3f15ec928999e2ce16bc59e4bd 142 Gene3D G3DSA:3.10.129.10 6 141 4.9E-26 T 14-10-2018 D172_019340 9b829b3f15ec928999e2ce16bc59e4bd 142 SUPERFAMILY SSF54637 9 132 1.31E-29 T 14-10-2018 IPR029069 HotDog domain superfamily D172_019340 9b829b3f15ec928999e2ce16bc59e4bd 142 PIRSF PIRSF003230 2 142 3.1E-20 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 D172_015760 1e2f6031960e570439ffb8d9daedd1c4 302 PIRSF PIRSF006278 3 300 2.9E-78 T 14-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase D172_015760 1e2f6031960e570439ffb8d9daedd1c4 302 SUPERFAMILY SSF53686 25 297 2.47E-55 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme D172_015760 1e2f6031960e570439ffb8d9daedd1c4 302 Gene3D G3DSA:3.40.50.1100 21 293 4.6E-69 T 14-10-2018 D172_015760 1e2f6031960e570439ffb8d9daedd1c4 302 Gene3D G3DSA:3.40.50.1100 43 146 4.6E-69 T 14-10-2018 D172_015760 1e2f6031960e570439ffb8d9daedd1c4 302 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 288 2.6E-20 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme D172_018585 b3e59047224594de4dc80ef89bf6726d 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 291 2.9E-51 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 D172_018585 b3e59047224594de4dc80ef89bf6726d 298 Gene3D G3DSA:1.20.1510.10 10 208 1.6E-26 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily D172_018585 b3e59047224594de4dc80ef89bf6726d 298 Pfam PF01545 Cation efflux family 14 206 1.3E-27 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 D172_018585 b3e59047224594de4dc80ef89bf6726d 298 SUPERFAMILY SSF160240 221 289 5.1E-5 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 D172_018585 b3e59047224594de4dc80ef89bf6726d 298 SUPERFAMILY SSF161111 8 208 5.89E-38 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily D172_006330 54df717abaaa1c9d743a13e5d81a0a15 124 Gene3D G3DSA:2.30.29.50 1 124 7.0E-48 T 14-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily D172_006330 54df717abaaa1c9d743a13e5d81a0a15 124 Pfam PF08000 Bacterial PH domain 3 122 3.3E-46 T 14-10-2018 IPR012544 Bacterial Pleckstrin homology domain D172_006330 54df717abaaa1c9d743a13e5d81a0a15 124 SUPERFAMILY SSF50729 6 124 2.95E-42 T 14-10-2018 D172_015335 e4d71e5a5c0b51d987a2aed2689e4594 144 SMART SM00226 3 143 3.0E-39 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I D172_015335 e4d71e5a5c0b51d987a2aed2689e4594 144 Gene3D G3DSA:3.40.50.2300 1 144 6.7E-48 T 14-10-2018 D172_015335 e4d71e5a5c0b51d987a2aed2689e4594 144 SUPERFAMILY SSF52788 2 144 6.54E-40 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily D172_015335 e4d71e5a5c0b51d987a2aed2689e4594 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 43 59 3.8E-23 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 D172_015335 e4d71e5a5c0b51d987a2aed2689e4594 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 77 92 3.8E-23 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 D172_015335 e4d71e5a5c0b51d987a2aed2689e4594 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 3.8E-23 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 D172_015335 e4d71e5a5c0b51d987a2aed2689e4594 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 115 130 3.8E-23 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 D172_015335 e4d71e5a5c0b51d987a2aed2689e4594 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 99 112 3.8E-23 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 D172_015335 e4d71e5a5c0b51d987a2aed2689e4594 144 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 140 7.3E-36 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I D172_010895 b89514caf91e570769760bf72b15067e 265 Gene3D G3DSA:3.30.2010.10 52 137 1.5E-6 T 14-10-2018 D172_010895 b89514caf91e570769760bf72b15067e 265 Pfam PF01435 Peptidase family M48 57 242 1.4E-38 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 D172_010845 4be376a08a852e29ceaee668364358d2 217 SUPERFAMILY SSF55469 6 214 3.14E-56 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 D172_010845 4be376a08a852e29ceaee668364358d2 217 Gene3D G3DSA:3.40.109.10 1 217 1.2E-57 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 D172_010845 4be376a08a852e29ceaee668364358d2 217 Pfam PF00881 Nitroreductase family 10 192 3.2E-23 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 D172_010835 5e5f81f3ccb58a3ddbc1cd86009d76b1 184 Pfam PF00578 AhpC/TSA family 11 134 1.6E-18 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 D172_010835 5e5f81f3ccb58a3ddbc1cd86009d76b1 184 SUPERFAMILY SSF52833 5 182 1.14E-43 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_010835 5e5f81f3ccb58a3ddbc1cd86009d76b1 184 Gene3D G3DSA:3.40.30.10 8 183 7.5E-43 T 14-10-2018 D172_017215 ef9c00bdc553777f117b54c70582d7ca 137 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 2 135 1.6E-40 T 14-10-2018 IPR019231 Protein of unknown function DUF2170 D172_019550 883be0f4d5637886df0d0e1cde54b0fb 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_019550 883be0f4d5637886df0d0e1cde54b0fb 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_019550 883be0f4d5637886df0d0e1cde54b0fb 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_019550 883be0f4d5637886df0d0e1cde54b0fb 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_019550 883be0f4d5637886df0d0e1cde54b0fb 298 Pfam PF03466 LysR substrate binding domain 110 287 1.9E-8 T 14-10-2018 IPR005119 LysR, substrate-binding D172_019550 883be0f4d5637886df0d0e1cde54b0fb 298 Gene3D G3DSA:3.40.190.290 93 276 3.7E-5 T 14-10-2018 D172_019550 883be0f4d5637886df0d0e1cde54b0fb 298 SUPERFAMILY SSF53850 92 288 6.52E-11 T 14-10-2018 D172_019550 883be0f4d5637886df0d0e1cde54b0fb 298 SUPERFAMILY SSF46785 1 84 7.79E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_019550 883be0f4d5637886df0d0e1cde54b0fb 298 Gene3D G3DSA:1.10.10.10 1 92 1.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_006760 d088ffde8ac69234f203592c6feb007b 390 SUPERFAMILY SSF51197 48 363 6.59E-39 T 14-10-2018 D172_006760 d088ffde8ac69234f203592c6feb007b 390 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 59 301 8.3E-15 T 14-10-2018 IPR008775 Phytanoyl-CoA dioxygenase D172_008905 872e6e81d84b00101f1b0ab87d12d3b3 337 PIRSF PIRSF029727 1 337 3.1E-108 T 14-10-2018 IPR016937 Uncharacterised conserved protein UCP029727 D172_008905 872e6e81d84b00101f1b0ab87d12d3b3 337 Pfam PF11141 Protein of unknown function (DUF2914) 271 335 3.4E-22 T 14-10-2018 IPR022606 Protein of unknown function DUF2914 D172_008050 7d51f9278ad65f15614fa0bb302caf02 290 PIRSF PIRSF001097 1 290 4.2E-175 T 14-10-2018 IPR016287 Beta-agarase GO:0033916 D172_008050 7d51f9278ad65f15614fa0bb302caf02 290 SUPERFAMILY SSF49899 21 288 2.38E-83 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily D172_008050 7d51f9278ad65f15614fa0bb302caf02 290 Gene3D G3DSA:2.60.120.200 16 290 2.8E-88 T 14-10-2018 D172_015580 346fa09a64c4dcc5bb84fdc0f2838290 159 Gene3D G3DSA:1.20.141.10 15 157 1.2E-6 T 14-10-2018 D172_017305 fbdc39399cf9ff48fa177437f8b7ab25 338 Gene3D G3DSA:2.120.10.80 8 264 2.6E-31 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 D172_017305 fbdc39399cf9ff48fa177437f8b7ab25 338 Gene3D G3DSA:2.120.10.80 265 338 1.6E-6 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 D172_017305 fbdc39399cf9ff48fa177437f8b7ab25 338 Pfam PF13964 Kelch motif 79 130 2.9E-7 T 14-10-2018 D172_017305 fbdc39399cf9ff48fa177437f8b7ab25 338 SUPERFAMILY SSF117281 34 334 1.83E-37 T 14-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 D172_009285 e947943edcd132e57a6934f3e76601a9 404 SUPERFAMILY SSF75005 60 270 6.81E-25 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily D172_009285 e947943edcd132e57a6934f3e76601a9 404 Gene3D G3DSA:2.115.10.20 11 398 2.4E-127 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily D172_009285 e947943edcd132e57a6934f3e76601a9 404 Pfam PF04616 Glycosyl hydrolases family 43 127 231 3.4E-7 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 D172_002260 9216712535c9b99cbe8492fbdd3f2064 224 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 16 220 2.2E-26 T 14-10-2018 IPR010239 Conserved hypothetical protein CHP02001 D172_002260 9216712535c9b99cbe8492fbdd3f2064 224 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 18 222 2.3E-55 T 14-10-2018 IPR010239 Conserved hypothetical protein CHP02001 D172_004730 5cda19eaf0da51965729cdc712b57e02 433 Gene3D G3DSA:3.30.70.2880 312 429 6.6E-13 T 14-10-2018 IPR038367 PelD, GGDEF domain superfamily D172_004730 5cda19eaf0da51965729cdc712b57e02 433 Pfam PF16963 PelD GGDEF domain 315 414 3.8E-12 T 14-10-2018 IPR031583 PelD, GGDEF domain D172_004730 5cda19eaf0da51965729cdc712b57e02 433 Gene3D G3DSA:3.30.450.40 154 305 2.0E-35 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_007810 64b690accb923b9cc243308f2876dfb2 451 PIRSF PIRSF006603 8 451 1.5E-59 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D172_007810 64b690accb923b9cc243308f2876dfb2 451 Pfam PF01554 MatE 243 404 8.9E-34 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D172_007810 64b690accb923b9cc243308f2876dfb2 451 Pfam PF01554 MatE 17 176 9.8E-34 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D172_007810 64b690accb923b9cc243308f2876dfb2 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 4.1E-90 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D172_015415 42c5b44b94fb72ab1720db2fd309bd78 319 Pfam PF02706 Chain length determinant protein 23 124 2.1E-14 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 D172_017560 7973a5c9bb2f170be061008ab4597421 167 PIRSF PIRSF028301 1 167 7.7E-65 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 D172_017560 7973a5c9bb2f170be061008ab4597421 167 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 161 6.7E-59 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 D172_017560 7973a5c9bb2f170be061008ab4597421 167 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 160 4.7E-61 T 14-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 D172_015235 940431f44eb4b22feeaf8b6b60f4170f 296 SUPERFAMILY SSF53448 1 281 1.19E-60 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_015235 940431f44eb4b22feeaf8b6b60f4170f 296 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 1 269 9.4E-113 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 D172_015235 940431f44eb4b22feeaf8b6b60f4170f 296 Pfam PF00483 Nucleotidyl transferase 2 269 1.2E-27 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 D172_015235 940431f44eb4b22feeaf8b6b60f4170f 296 Gene3D G3DSA:3.90.550.10 1 295 3.7E-85 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_014830 7bebce38cd216136d1b25875f972b7a1 234 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 222 5.0E-32 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 D172_014830 7bebce38cd216136d1b25875f972b7a1 234 SUPERFAMILY SSF51695 1 228 2.2E-56 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 D172_014830 7bebce38cd216136d1b25875f972b7a1 234 Gene3D G3DSA:3.20.20.190 1 230 1.4E-57 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 D172_002185 7feb6594f7309f9cb62a8e23418b5e06 201 Pfam PF03602 Conserved hypothetical protein 95 19 197 6.9E-58 T 14-10-2018 D172_002185 7feb6594f7309f9cb62a8e23418b5e06 201 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 133 139 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 D172_002185 7feb6594f7309f9cb62a8e23418b5e06 201 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 12 198 2.0E-57 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 D172_002185 7feb6594f7309f9cb62a8e23418b5e06 201 Gene3D G3DSA:3.40.50.150 7 201 1.6E-55 T 14-10-2018 D172_002185 7feb6594f7309f9cb62a8e23418b5e06 201 SUPERFAMILY SSF53335 19 197 3.49E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_002185 7feb6594f7309f9cb62a8e23418b5e06 201 PIRSF PIRSF004553 18 200 6.1E-55 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 D172_017895 9be8b8d54e257705ae43790d963d8683 74 Gene3D G3DSA:3.30.1390.10 30 74 9.8E-8 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D172_017895 9be8b8d54e257705ae43790d963d8683 74 SUPERFAMILY SSF54736 35 70 4.88E-5 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like D172_003675 7bea4c6ef93d11faa93f1d3ac455489a 90 Gene3D G3DSA:1.10.3880.10 1 90 2.5E-36 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 D172_003675 7bea4c6ef93d11faa93f1d3ac455489a 90 PIRSF PIRSF029827 1 90 1.5E-40 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 D172_003675 7bea4c6ef93d11faa93f1d3ac455489a 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 26.472 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 D172_003675 7bea4c6ef93d11faa93f1d3ac455489a 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.2E-40 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 D172_003675 7bea4c6ef93d11faa93f1d3ac455489a 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 2.0E-37 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 D172_003675 7bea4c6ef93d11faa93f1d3ac455489a 90 SUPERFAMILY SSF111148 1 89 2.62E-38 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 D172_014200 a833a3dfa0d792f5df9379ee297679cd 182 Pfam PF07209 Protein of unknown function (DUF1415) 6 171 2.5E-62 T 14-10-2018 IPR009858 Protein of unknown function DUF1415 D172_015370 4209f7348cf9fc0b966655f4994e24c2 294 Gene3D G3DSA:3.90.550.10 7 258 5.4E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_015370 4209f7348cf9fc0b966655f4994e24c2 294 SUPERFAMILY SSF53448 11 281 1.41E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_015370 4209f7348cf9fc0b966655f4994e24c2 294 Pfam PF00535 Glycosyl transferase family 2 20 183 1.4E-13 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 D172_006085 a9162fc0b518cbfad0ed4ab7307161bb 99 Pfam PF11743 Protein of unknown function (DUF3301) 5 96 1.8E-24 T 14-10-2018 IPR021732 Protein of unknown function DUF3301 D172_016870 3af74665e415bee48d3fdb4564255e8b 257 Pfam PF00795 Carbon-nitrogen hydrolase 6 236 3.7E-29 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 D172_016870 3af74665e415bee48d3fdb4564255e8b 257 Gene3D G3DSA:3.60.110.10 1 257 1.4E-74 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D172_016870 3af74665e415bee48d3fdb4564255e8b 257 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 138 158 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site D172_016870 3af74665e415bee48d3fdb4564255e8b 257 SUPERFAMILY SSF56317 1 247 3.66E-56 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily D172_008965 b0a2e316128332864ddcfdf4aba01679 384 Pfam PF01548 Transposase 9 157 4.5E-14 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 D172_008965 b0a2e316128332864ddcfdf4aba01679 384 Pfam PF02371 Transposase IS116/IS110/IS902 family 227 300 7.8E-20 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 D172_013125 3208000ae244f9c6e0af14a8c2caea3d 122 Pfam PF11456 Protein of unknown function (DUF3019) 21 121 2.0E-26 T 14-10-2018 IPR021559 Protein of unknown function DUF3019 D172_018835 fba9e48b5102561d9bc167c7ca5fefc2 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018835 fba9e48b5102561d9bc167c7ca5fefc2 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018835 fba9e48b5102561d9bc167c7ca5fefc2 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 218 2.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018835 fba9e48b5102561d9bc167c7ca5fefc2 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018835 fba9e48b5102561d9bc167c7ca5fefc2 240 Gene3D G3DSA:3.40.50.720 1 240 1.0E-26 T 14-10-2018 D172_018835 fba9e48b5102561d9bc167c7ca5fefc2 240 Pfam PF00106 short chain dehydrogenase 2 195 3.8E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR D172_018835 fba9e48b5102561d9bc167c7ca5fefc2 240 SUPERFAMILY SSF51735 1 240 5.72E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_008170 371cb1fe77f464ab4e1f738f3c426699 273 Pfam PF02517 CAAX protease self-immunity 111 205 6.7E-10 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 D172_010585 c242a4d0d819ecc80695d9508aa9a17d 293 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 8 266 7.5E-40 T 14-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 D172_003235 351ccb319a3ed48b709044a6dd42b80d 109 Gene3D G3DSA:1.10.260.40 32 108 1.4E-8 T 14-10-2018 D172_006295 a30e759195de66917818f3d451b06ad5 251 Pfam PF11750 Protein of unknown function (DUF3307) 7 126 2.6E-30 T 14-10-2018 IPR021737 Bacteriophage phiKZ, Orf197 D172_005775 c0d9ca9ab4c198f2201a9ecb93e94d8c 178 Pfam PF07484 Phage Tail Collar Domain 7 63 2.2E-19 T 14-10-2018 IPR011083 Phage tail collar domain D172_005775 c0d9ca9ab4c198f2201a9ecb93e94d8c 178 SUPERFAMILY SSF88874 1 172 6.41E-39 T 14-10-2018 D172_005775 c0d9ca9ab4c198f2201a9ecb93e94d8c 178 Gene3D G3DSA:3.90.1340.10 2 59 6.6E-13 T 14-10-2018 IPR037053 Phage tail collar domain superfamily D172_020105 576e89ab3b3d31b77a9f39ca1b042a07 432 Pfam PF05707 Zonular occludens toxin (Zot) 4 257 5.0E-44 T 14-10-2018 IPR008900 Zona occludens toxin D172_007145 884bfa581c6fbd5e57bdcea97dbd2d1f 225 SUPERFAMILY SSF161098 6 216 3.4E-46 T 14-10-2018 IPR035906 MetI-like superfamily D172_007145 884bfa581c6fbd5e57bdcea97dbd2d1f 225 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 218 2.1E-63 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 D172_007145 884bfa581c6fbd5e57bdcea97dbd2d1f 225 Gene3D G3DSA:1.10.3720.10 2 220 3.3E-51 T 14-10-2018 IPR035906 MetI-like superfamily D172_007145 884bfa581c6fbd5e57bdcea97dbd2d1f 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 214 6.5E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 D172_010425 06a92b340c79b5a1be45fc8323ad9918 446 Pfam PF01145 SPFH domain / Band 7 family 51 292 2.4E-9 T 14-10-2018 IPR001107 Band 7 domain D172_006320 d40a7418cc79744cb3ad9c0c96244c70 275 Pfam PF12679 ABC-2 family transporter protein 71 228 9.4E-13 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 D172_004295 32b5991babcc6a7af60285acb152cbf0 319 SUPERFAMILY SSF103481 187 285 7.85E-17 T 14-10-2018 D172_004295 32b5991babcc6a7af60285acb152cbf0 319 SUPERFAMILY SSF103481 37 137 1.44E-12 T 14-10-2018 D172_004295 32b5991babcc6a7af60285acb152cbf0 319 Pfam PF00892 EamA-like transporter family 4 134 2.4E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_004295 32b5991babcc6a7af60285acb152cbf0 319 Pfam PF00892 EamA-like transporter family 148 281 2.0E-25 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_020370 b9dece347931af3a96f297cd54b84160 255 SUPERFAMILY SSF49354 25 157 1.13E-7 T 14-10-2018 IPR008962 PapD-like superfamily D172_012060 f5dd3f15bc3a8ba876ac4a9824dfc837 194 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 68 168 7.9E-5 T 14-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 D172_008635 f402520b6edb227936b81f7b29bb1f63 233 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 171 1.3E-14 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase D172_020905 91049083017ff336bfaa05a65ef4f3cd 97 Pfam PF03692 Putative zinc- or iron-chelating domain 15 87 1.2E-11 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein D172_017660 af4025d35acc786c8a396b6b1177878a 252 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 15 131 2.0E-6 T 14-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN D172_017660 af4025d35acc786c8a396b6b1177878a 252 SUPERFAMILY SSF159501 20 122 2.49E-5 T 14-10-2018 D172_008225 d6ea82ffe5b77e5751b4a5282fa41f98 454 Pfam PF07044 Protein of unknown function (DUF1329) 84 450 9.9E-156 T 14-10-2018 IPR010752 Protein of unknown function DUF1329 D172_010580 27b985b0bf163473802b48e85b52ef27 345 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 6 330 1.6E-82 T 14-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid D172_010580 27b985b0bf163473802b48e85b52ef27 345 Pfam PF05125 Phage major capsid protein, P2 family 9 330 8.3E-106 T 14-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid D172_010025 c087c54c821e34f28f35ac2ca6f1e20d 198 SMART SM01144 2 189 2.9E-48 T 14-10-2018 IPR005636 DTW D172_010025 c087c54c821e34f28f35ac2ca6f1e20d 198 Pfam PF03942 DTW domain 3 184 1.0E-39 T 14-10-2018 IPR005636 DTW D172_011115 775b134fbe7f3950220f2e65bf6515ae 256 Pfam PF11932 Protein of unknown function (DUF3450) 13 252 1.8E-86 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 D172_011115 775b134fbe7f3950220f2e65bf6515ae 256 PIRSF PIRSF028069 5 256 5.5E-84 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 D172_007295 3f63c3018e649247706cacfc3c1461e2 730 TIGRFAM TIGR04456 LruC_dom: LruC domain 457 718 2.3E-66 T 14-10-2018 IPR031025 LruC domain D172_007295 3f63c3018e649247706cacfc3c1461e2 730 Pfam PF16130 Domain of unknown function (DUF4842) 490 717 8.2E-48 T 14-10-2018 IPR032295 Domain of unknown function DUF4842 D172_007295 3f63c3018e649247706cacfc3c1461e2 730 SUPERFAMILY SSF101898 67 247 3.14E-8 T 14-10-2018 D172_007395 f9a742a7fd0f5f45af514d87ffb513d0 290 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 3 273 9.1E-74 T 14-10-2018 IPR010119 Gluconeogenesis factor D172_007395 f9a742a7fd0f5f45af514d87ffb513d0 290 SUPERFAMILY SSF142338 1 284 2.35E-68 T 14-10-2018 D172_007395 f9a742a7fd0f5f45af514d87ffb513d0 290 Pfam PF01933 Uncharacterised protein family UPF0052 3 272 2.9E-60 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 D172_007395 f9a742a7fd0f5f45af514d87ffb513d0 290 Gene3D G3DSA:3.40.50.12300 1 286 2.4E-73 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily D172_008460 0e65c3cda837c71a977d03dddde44e09 402 Pfam PF12679 ABC-2 family transporter protein 4 399 4.3E-27 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 D172_003495 1195586f9a28e1742decb857ea4b407d 147 Pfam PF06295 Protein of unknown function (DUF1043) 11 135 6.1E-27 T 14-10-2018 IPR009386 Protein of unknown function DUF1043 D172_004080 7ac19871b901519acdc3c1a48c0164fc 233 SUPERFAMILY SSF53850 23 225 1.74E-27 T 14-10-2018 D172_004080 7ac19871b901519acdc3c1a48c0164fc 233 SMART SM00062 21 232 0.0061 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D172_004080 7ac19871b901519acdc3c1a48c0164fc 233 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 207 5.6E-18 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF D172_004080 7ac19871b901519acdc3c1a48c0164fc 233 Gene3D G3DSA:3.40.190.10 19 107 2.3E-22 T 14-10-2018 D172_004080 7ac19871b901519acdc3c1a48c0164fc 233 Gene3D G3DSA:3.40.190.10 108 187 2.3E-22 T 14-10-2018 D172_002320 fcfc6f85ccf3925bf6821723ef717fdd 447 Pfam PF04932 O-Antigen ligase 195 324 5.2E-10 T 14-10-2018 IPR007016 O-antigen ligase-related D172_015095 1302eaf62807931f12581fb96b8d0887 437 Pfam PF01618 MotA/TolQ/ExbB proton channel family 307 421 2.7E-25 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel D172_010950 09e9b5d2caa41516442ca281e903df75 236 Pfam PF00005 ABC transporter 21 169 2.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_010950 09e9b5d2caa41516442ca281e903df75 236 SMART SM00382 30 217 4.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_010950 09e9b5d2caa41516442ca281e903df75 236 SUPERFAMILY SSF52540 1 221 2.53E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_010950 09e9b5d2caa41516442ca281e903df75 236 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 D172_010950 09e9b5d2caa41516442ca281e903df75 236 Gene3D G3DSA:3.40.50.300 1 233 6.6E-66 T 14-10-2018 D172_006965 8e1e1c80887af457bb5d25905b80edc7 147 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 10 145 2.0E-18 T 14-10-2018 IPR011971 Conserved hypothetical protein CHP02284 D172_006965 8e1e1c80887af457bb5d25905b80edc7 147 Gene3D G3DSA:1.20.1260.10 1 147 4.9E-22 T 14-10-2018 IPR012347 Ferritin-like D172_006965 8e1e1c80887af457bb5d25905b80edc7 147 Pfam PF09537 Domain of unknown function (DUF2383) 9 116 2.7E-30 T 14-10-2018 IPR019052 Domain of unknown function DUF2383 D172_014870 002286ae5584f9087b0adf3474917e41 116 Pfam PF11042 Protein of unknown function (DUF2750) 12 114 7.0E-32 T 14-10-2018 IPR021284 Protein of unknown function DUF2750 D172_018100 fc5ac825f274ddaa46766de965d01966 244 Pfam PF01844 HNH endonuclease 170 226 2.7E-6 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 D172_006275 c1d757324b23ab2e19d3b8ffd62848df 250 Gene3D G3DSA:3.40.50.1820 22 249 9.9E-12 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_006275 c1d757324b23ab2e19d3b8ffd62848df 250 SUPERFAMILY SSF53474 34 248 3.16E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_008135 7dcd98337ae07c93b6c679a35c9dcc03 88 Pfam PF04077 DsrH like protein 18 84 1.8E-9 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 D172_008135 7dcd98337ae07c93b6c679a35c9dcc03 88 Gene3D G3DSA:3.40.1260.10 1 88 2.9E-11 T 14-10-2018 IPR027396 DsrEFH-like D172_008135 7dcd98337ae07c93b6c679a35c9dcc03 88 SUPERFAMILY SSF75169 3 88 4.41E-15 T 14-10-2018 IPR027396 DsrEFH-like D172_014735 2de58abcb98ebe50a3c16accd59804a6 914 SUPERFAMILY SSF49313 28 116 2.29E-7 T 14-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 D172_014735 2de58abcb98ebe50a3c16accd59804a6 914 Gene3D G3DSA:2.60.40.10 25 113 4.5E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold D172_010565 5c5d98b374eec4c88dfbfcf8963aaab9 157 Pfam PF06891 P2 phage tail completion protein R (GpR) 5 135 9.2E-12 T 14-10-2018 IPR009678 Bacteriophage tail completion protein R D172_009380 01ad83b114374671c847ca9fa1aff669 240 Pfam PF07277 SapC 7 232 2.3E-67 T 14-10-2018 IPR010836 SapC D172_016020 405eb976b5e1eeeae9ca3f96600b652b 171 Pfam PF10675 Protein of unknown function (DUF2489) 16 155 1.0E-44 T 14-10-2018 IPR019617 Domain of unknown function DUF2489 D172_017825 c6b0e9db552d9005824f748f3133e793 144 SUPERFAMILY SSF55729 5 137 2.33E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_017825 c6b0e9db552d9005824f748f3133e793 144 Pfam PF00583 Acetyltransferase (GNAT) family 43 125 1.2E-11 T 14-10-2018 IPR000182 GNAT domain D172_017825 c6b0e9db552d9005824f748f3133e793 144 Gene3D G3DSA:3.40.630.30 3 135 4.1E-19 T 14-10-2018 D172_010560 38402889724ab5ae8e0ab112c30d2d03 210 Pfam PF05069 Phage virion morphogenesis family 12 121 9.3E-10 T 14-10-2018 IPR006522 Phage virion morphogensis protein D172_010560 38402889724ab5ae8e0ab112c30d2d03 210 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 11 120 1.0E-10 T 14-10-2018 IPR006522 Phage virion morphogensis protein D172_008390 7a4e0e10523cb06b021d716a382f65ef 92 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 89 2.6E-4 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 D172_005745 1d6409d8a730e69bca3ec45eaa0aafa2 355 Gene3D G3DSA:2.60.120.620 138 354 2.5E-21 T 14-10-2018 D172_005745 1d6409d8a730e69bca3ec45eaa0aafa2 355 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 144 342 7.5E-12 T 14-10-2018 IPR008775 Phytanoyl-CoA dioxygenase D172_005745 1d6409d8a730e69bca3ec45eaa0aafa2 355 SUPERFAMILY SSF51197 134 351 1.01E-35 T 14-10-2018 D172_005985 ad5a448fc0782ba590bd06c96f0f05de 297 SUPERFAMILY SSF52768 2 283 2.3E-75 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily D172_005985 ad5a448fc0782ba590bd06c96f0f05de 297 Gene3D G3DSA:3.40.800.20 1 296 2.2E-62 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D172_005985 ad5a448fc0782ba590bd06c96f0f05de 297 Pfam PF00850 Histone deacetylase domain 24 280 9.5E-49 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D172_005985 ad5a448fc0782ba590bd06c96f0f05de 297 PRINTS PR01270 Histone deacetylase superfamily signature 149 164 1.8E-14 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D172_005985 ad5a448fc0782ba590bd06c96f0f05de 297 PRINTS PR01270 Histone deacetylase superfamily signature 115 138 1.8E-14 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D172_005985 ad5a448fc0782ba590bd06c96f0f05de 297 PRINTS PR01270 Histone deacetylase superfamily signature 223 233 1.8E-14 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 D172_006435 c15493afe8c95d170936f7f7637a69cc 351 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 19 251 3.0E-63 T 14-10-2018 IPR018642 Protein of unknown function DUF2066 D172_013270 5b14606cc5fcbd8bcc3e78374620ba11 245 Pfam PF01578 Cytochrome C assembly protein 28 184 6.6E-33 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 D172_013270 5b14606cc5fcbd8bcc3e78374620ba11 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 3.2E-77 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013270 5b14606cc5fcbd8bcc3e78374620ba11 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 2.0E-56 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013270 5b14606cc5fcbd8bcc3e78374620ba11 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 2.0E-56 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013270 5b14606cc5fcbd8bcc3e78374620ba11 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 2.0E-56 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013270 5b14606cc5fcbd8bcc3e78374620ba11 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 2.0E-56 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013270 5b14606cc5fcbd8bcc3e78374620ba11 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 2.0E-56 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_013270 5b14606cc5fcbd8bcc3e78374620ba11 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 2.0E-56 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 D172_011535 05f3b48e2f8a0db262a38069987d10e3 230 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 101 198 5.5E-14 T 14-10-2018 IPR032871 AHH domain-containing protein D172_016155 29d5c9b7e304afcc3bc4a2f55dae6117 777 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 101 776 1.7E-269 T 14-10-2018 IPR010706 Fatty acid cis-trans isomerase D172_008850 cd81cfb63dac938ac8b8817a7d9119f0 56 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 28.238 T 14-10-2018 IPR007040 Ribosome modulation factor D172_008850 cd81cfb63dac938ac8b8817a7d9119f0 56 Pfam PF04957 Ribosome modulation factor 1 52 5.7E-29 T 14-10-2018 IPR007040 Ribosome modulation factor D172_008850 cd81cfb63dac938ac8b8817a7d9119f0 56 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 1.0E-22 T 14-10-2018 IPR007040 Ribosome modulation factor D172_008850 cd81cfb63dac938ac8b8817a7d9119f0 56 Gene3D G3DSA:1.10.10.620 1 56 1.5E-27 T 14-10-2018 IPR023200 Ribosome modulation factor domain superfamily D172_005740 3d10c42da733837f962899dc9345ba50 423 SUPERFAMILY SSF53335 80 227 2.32E-11 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_005740 3d10c42da733837f962899dc9345ba50 423 Gene3D G3DSA:3.40.50.150 43 209 9.6E-15 T 14-10-2018 D172_019365 ac0c2e0a035f2dd572b495cba7795cf2 389 Gene3D G3DSA:3.40.47.10 53 233 2.8E-29 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_019365 ac0c2e0a035f2dd572b495cba7795cf2 389 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 235 334 3.7E-26 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal D172_019365 ac0c2e0a035f2dd572b495cba7795cf2 389 SUPERFAMILY SSF53901 67 223 2.55E-32 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_019365 ac0c2e0a035f2dd572b495cba7795cf2 389 Gene3D G3DSA:3.40.47.10 238 383 5.2E-38 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_019365 ac0c2e0a035f2dd572b495cba7795cf2 389 SUPERFAMILY SSF53901 198 384 1.34E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 D172_019365 ac0c2e0a035f2dd572b495cba7795cf2 389 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 53 224 8.9E-21 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D172_019365 ac0c2e0a035f2dd572b495cba7795cf2 389 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 143 159 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site D172_019365 ac0c2e0a035f2dd572b495cba7795cf2 389 SMART SM00825 Beta-ketoacyl synthase 56 385 1.4E-6 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain D172_016025 95bef3598f5b0a8a7cf6e2a63f0f3678 197 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 185 13.98 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 D172_016025 95bef3598f5b0a8a7cf6e2a63f0f3678 197 Pfam PF04220 Der GTPase activator (YihI) 24 167 2.3E-31 T 14-10-2018 IPR007336 Der GTPase activator GO:0005096 D172_014430 884387b8eeda673aabf9ca65464aed70 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 264 4.3E-110 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 D172_014430 884387b8eeda673aabf9ca65464aed70 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 40.983 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 D172_014430 884387b8eeda673aabf9ca65464aed70 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 257 1.5E-104 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 D172_014430 884387b8eeda673aabf9ca65464aed70 264 PIRSF PIRSF000388 1 264 1.6E-97 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 D172_014430 884387b8eeda673aabf9ca65464aed70 264 SUPERFAMILY SSF51621 3 263 3.53E-103 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 D172_014430 884387b8eeda673aabf9ca65464aed70 264 Gene3D G3DSA:3.20.20.60 1 264 2.6E-103 T 14-10-2018 D172_013855 5b4ff6c4dd32986ff53e97fe3cb324ea 172 Pfam PF07603 Protein of unknown function (DUF1566) 43 169 2.1E-29 T 14-10-2018 IPR011460 Protein of unknown function DUF1566 D172_002340 e6b88941c17590dd64798146658adf47 283 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 282 2.2E-29 T 14-10-2018 IPR031347 Protein AmpE D172_012320 a1cf77014718ebcaa471d72008c2676b 195 SUPERFAMILY SSF53098 19 186 2.28E-6 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_011885 5a5817c3a449d7367114f72ff60c597a 122 Pfam PF04241 Protein of unknown function (DUF423) 19 103 7.3E-30 T 14-10-2018 IPR006696 Protein of unknown function DUF423 D172_013075 c27a874e672d21d46e3b3a8caa3db831 127 Pfam PF11456 Protein of unknown function (DUF3019) 30 126 6.9E-26 T 14-10-2018 IPR021559 Protein of unknown function DUF3019 D172_010120 388387f0dd19949e0fe6218ad1bea05f 183 Pfam PF01292 Prokaryotic cytochrome b561 9 178 5.1E-32 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 D172_010120 388387f0dd19949e0fe6218ad1bea05f 183 SUPERFAMILY SSF81342 4 177 1.88E-36 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 D172_000900 0fc8dc377c169259ade726908fcf8c8c 282 SUPERFAMILY SSF50341 170 264 2.35E-5 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 D172_019525 d62724f0310d9133140642e358149c29 356 Pfam PF04235 Protein of unknown function (DUF418) 200 351 1.3E-25 T 14-10-2018 IPR007349 Domain of unknown function DUF418 D172_015615 145cce71cf6cec6928c33c3d75a31927 540 SUPERFAMILY SSF69255 354 433 1.1E-12 T 14-10-2018 D172_015615 145cce71cf6cec6928c33c3d75a31927 540 Gene3D G3DSA:2.40.50.230 358 438 2.7E-10 T 14-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily D172_015195 6ef74f6e9912c1767c9511659b817c52 228 SUPERFAMILY SSF52540 2 221 8.27E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_015195 6ef74f6e9912c1767c9511659b817c52 228 Gene3D G3DSA:3.40.50.300 1 226 3.6E-53 T 14-10-2018 D172_015195 6ef74f6e9912c1767c9511659b817c52 228 Pfam PF00005 ABC transporter 23 177 8.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 D172_015195 6ef74f6e9912c1767c9511659b817c52 228 SMART SM00382 29 226 3.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain D172_010555 a436a82b5de2416a7b90fa5608d406f5 366 Pfam PF10758 Protein of unknown function (DUF2586) 4 363 2.1E-114 T 14-10-2018 IPR019694 Bacteriophage HP1, Orf23 D172_010410 e9a4b9d105b4fd3bb61a644331bbd050 315 Pfam PF05982 Na+-dependent bicarbonate transporter superfamily 5 311 8.9E-101 T 14-10-2018 IPR010293 Na+-dependent bicarbonate transporter superfamily D172_002825 7bb0e3beec5132082df91c4316469966 140 Pfam PF05618 Putative ATP-dependant zinc protease 7 137 2.3E-38 T 14-10-2018 D172_002825 7bb0e3beec5132082df91c4316469966 140 SUPERFAMILY SSF50630 7 139 8.04E-44 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily D172_002825 7bb0e3beec5132082df91c4316469966 140 Gene3D G3DSA:2.40.70.10 3 133 5.8E-36 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily D172_018335 d16801845a3313075d4b684995e04ac5 163 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 155 4.4E-32 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ D172_019165 6d1b1bd522a00c41b30a2283daa770de 321 SUPERFAMILY SSF53098 175 320 1.39E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_019165 6d1b1bd522a00c41b30a2283daa770de 321 Gene3D G3DSA:3.30.420.10 169 320 7.4E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 D172_019165 6d1b1bd522a00c41b30a2283daa770de 321 Pfam PF00665 Integrase core domain 177 280 4.9E-12 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 D172_019165 6d1b1bd522a00c41b30a2283daa770de 321 Pfam PF13936 Helix-turn-helix domain 2 45 1.8E-13 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain D172_016910 2db4877ec8b8b0c5f1afd5303459e421 593 Pfam PF05960 Bacterial protein of unknown function (DUF885) 62 579 3.2E-163 T 14-10-2018 IPR010281 Protein of unknown function DUF885 D172_007940 d4bed2eb287d0e48d1f04142d89ec1a0 83 SUPERFAMILY SSF53098 7 82 6.07E-14 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_002430 9aefcb5ed0308ab1eade0d3e0c179180 124 Pfam PF12514 Protein of unknown function (DUF3718) 34 97 2.9E-23 T 14-10-2018 IPR022193 Protein of unknown function DUF3718 D172_015105 f2f41475eac2452c1ed675efe7d48091 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 2.6E-30 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 D172_015105 f2f41475eac2452c1ed675efe7d48091 134 Gene3D G3DSA:3.30.420.270 63 130 4.6E-7 T 14-10-2018 D172_010180 c2cd3de0f600bb549c777060efaec95e 191 Pfam PF04279 Intracellular septation protein A 1 185 2.7E-53 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 D172_010180 c2cd3de0f600bb549c777060efaec95e 191 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 186 16.016 T 14-10-2018 IPR006008 Intracellular septation protein A GO:0016021 D172_015850 e7773937f08be38c96eb8273636df759 178 Gene3D G3DSA:2.30.30.830 77 170 3.7E-31 T 14-10-2018 D172_015850 e7773937f08be38c96eb8273636df759 178 Pfam PF04351 Pilus assembly protein, PilP 25 169 8.4E-49 T 14-10-2018 IPR007446 Pilus assembly protein PilP D172_015850 e7773937f08be38c96eb8273636df759 178 PIRSF PIRSF016481 2 173 7.9E-49 T 14-10-2018 IPR007446 Pilus assembly protein PilP D172_018520 3e5220a74014697f343c90fb13c3d99a 139 Pfam PF11911 Protein of unknown function (DUF3429) 9 131 1.9E-18 T 14-10-2018 IPR021836 Protein of unknown function DUF3429 D172_008220 940e81bb9987bd5c55c7f720c7e96399 699 Pfam PF06980 Protein of unknown function (DUF1302) 33 698 1.6E-189 T 14-10-2018 IPR010727 Protein of unknown function DUF1302 D172_013265 52d285eaf972971ae9cecfda91093593 67 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 9.5E-17 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 D172_013265 52d285eaf972971ae9cecfda91093593 67 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 1.8E-14 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 D172_007475 e17874689472f55a9bff32d88ea08e86 426 Gene3D G3DSA:1.50.10.10 22 426 1.2E-157 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 D172_007475 e17874689472f55a9bff32d88ea08e86 426 SUPERFAMILY SSF48208 25 423 1.43E-118 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 D172_007475 e17874689472f55a9bff32d88ea08e86 426 Pfam PF01270 Glycosyl hydrolases family 8 80 413 7.8E-24 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 D172_000290 c62648b00a9e1b5f00536e7c51fd4120 196 Pfam PF06836 Protein of unknown function (DUF1240) 65 153 5.9E-5 T 14-10-2018 IPR010665 Protein of unknown function DUF1240 D172_014805 739d1756e01162048824e2b1e933bd6d 263 Gene3D G3DSA:3.40.50.1110 50 227 1.2E-20 T 14-10-2018 IPR036514 SGNH hydrolase superfamily D172_004205 f65d109d5186ee31de197c7f39d9b954 78 Pfam PF10688 Bacterial inner membrane protein 3 70 2.7E-6 T 14-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV D172_004205 f65d109d5186ee31de197c7f39d9b954 78 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 4 65 6.0E-25 T 14-10-2018 IPR020137 Uncharacterised protein family HI1736 D172_013635 6e07049d94ad46b9bcb58bcc2bef120e 231 PIRSF PIRSF028688 35 231 8.1E-44 T 14-10-2018 IPR014549 Flagellar protein FlgO D172_021000 415ca003c05d0259d39373a76dd3b287 167 Pfam PF13453 Transcription factor zinc-finger 68 110 1.7E-11 T 14-10-2018 IPR027392 Transcription factor zinc-finger D172_008685 05d1f9b22c4e8256258b17fae0e29a66 222 Pfam PF01914 MarC family integral membrane protein 26 214 1.6E-41 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 D172_008685 05d1f9b22c4e8256258b17fae0e29a66 222 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 31 212 1.9E-36 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 D172_011340 46cf51de49a04250d7eaf4bbe39c7024 147 Pfam PF09842 Predicted membrane protein (DUF2069) 20 121 5.1E-30 T 14-10-2018 IPR018643 Protein of unknown function DUF2069, membrane D172_005875 8a73f66d3e2e2830bb7a08b7d9b7bc80 184 Pfam PF04315 Elongation factor P hydroxylase 10 172 1.4E-76 T 14-10-2018 IPR007411 Elongation factor P hydroxylase D172_006490 1615390f1ed98761ee7cb0f10d3740fd 893 Pfam PF03993 Domain of Unknown Function (DUF349) 626 693 4.2E-9 T 14-10-2018 IPR007139 Protein of unknown function DUF349 D172_006490 1615390f1ed98761ee7cb0f10d3740fd 893 Pfam PF03993 Domain of Unknown Function (DUF349) 551 624 2.9E-10 T 14-10-2018 IPR007139 Protein of unknown function DUF349 D172_006490 1615390f1ed98761ee7cb0f10d3740fd 893 Pfam PF03993 Domain of Unknown Function (DUF349) 465 541 2.5E-5 T 14-10-2018 IPR007139 Protein of unknown function DUF349 D172_020135 54ef5228a2f614fa61dce30c8b135e13 102 Pfam PF07459 CTX phage RstB protein 3 101 1.2E-4 T 14-10-2018 IPR010008 Vibrio phage CTX, RstB D172_007880 ce7206614809e68242f322c8991a6714 234 PIRSF PIRSF037208 1 234 1.2E-78 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 D172_007880 ce7206614809e68242f322c8991a6714 234 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 224 3.3E-36 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 D172_007880 ce7206614809e68242f322c8991a6714 234 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 85 1.2E-15 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 D172_007880 ce7206614809e68242f322c8991a6714 234 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 5 232 35.851 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 D172_007880 ce7206614809e68242f322c8991a6714 234 SUPERFAMILY SSF55729 79 232 9.24E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase D172_013615 5e6287ac500fab382d4f1bb6bc6614f9 248 Pfam PF09569 ScaI restriction endonuclease 4 189 2.6E-28 T 14-10-2018 IPR019069 Restriction endonuclease, type II, ScaI D172_010600 b153af39c299215bb958d7a37e48e589 108 Pfam PF16083 LydA holin phage, holin superfamily III 31 85 1.4E-9 T 14-10-2018 IPR032126 LydA-like holin D172_005975 d236223937a13fa49259fda6c2982520 291 Pfam PF00892 EamA-like transporter family 9 136 1.2E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_005975 d236223937a13fa49259fda6c2982520 291 Pfam PF00892 EamA-like transporter family 150 281 1.7E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_005975 d236223937a13fa49259fda6c2982520 291 SUPERFAMILY SSF103481 38 139 6.41E-16 T 14-10-2018 D172_005975 d236223937a13fa49259fda6c2982520 291 SUPERFAMILY SSF103481 189 281 1.44E-14 T 14-10-2018 D172_020830 88d9fb0e4cafbad4c9f6060e708744cf 377 Pfam PF07607 Protein of unknown function (DUF1570) 230 335 3.4E-6 T 14-10-2018 IPR011464 Domain of unknown function DUF1570 D172_009695 70fb0111c4e7d69a96d9a4a621496356 332 SUPERFAMILY SSF53474 56 287 5.96E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_009695 70fb0111c4e7d69a96d9a4a621496356 332 PIRSF PIRSF031982 1 330 4.3E-77 T 14-10-2018 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL D172_009695 70fb0111c4e7d69a96d9a4a621496356 332 Gene3D G3DSA:3.40.50.1820 18 298 1.4E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_014050 46268566865516142c1dcb4781795ecc 117 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 92 111 - T 14-10-2018 IPR001876 Zinc finger, RanBP2-type D172_014050 46268566865516142c1dcb4781795ecc 117 SUPERFAMILY SSF90209 84 116 3.73E-5 T 14-10-2018 IPR036443 Zinc finger, RanBP2-type superfamily D172_014050 46268566865516142c1dcb4781795ecc 117 Pfam PF09413 Putative prokaryotic signal transducing protein 16 82 2.7E-13 T 14-10-2018 IPR018551 Domain of unknown function DUF2007 D172_018130 32fb2a7447a4a4d053476e90136183df 490 SUPERFAMILY SSF52096 81 458 1.56E-17 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily D172_018130 32fb2a7447a4a4d053476e90136183df 490 Pfam PF03572 Peptidase family S41 245 430 4.0E-11 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 D172_018455 868d48af9d932a4b78f95d0e4ffbaf83 324 SMART SM01321 12 187 0.0045 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D172_018455 868d48af9d932a4b78f95d0e4ffbaf83 324 SUPERFAMILY SSF143422 15 193 1.57E-19 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D172_012265 c764433fa4566b5b45b44650aedc8dd4 181 SUPERFAMILY SSF53098 6 173 2.65E-7 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily D172_015705 6258fa4f399de22fba7768364f27ebc6 187 Gene3D G3DSA:1.10.1740.10 12 105 1.2E-7 T 14-10-2018 D172_015705 6258fa4f399de22fba7768364f27ebc6 187 Pfam PF08281 Sigma-70, region 4 129 181 3.5E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 D172_015705 6258fa4f399de22fba7768364f27ebc6 187 SUPERFAMILY SSF88946 19 89 2.2E-8 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 D172_015705 6258fa4f399de22fba7768364f27ebc6 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 182 9.0E-21 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 D172_015705 6258fa4f399de22fba7768364f27ebc6 187 SUPERFAMILY SSF88659 118 182 5.23E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like D172_015705 6258fa4f399de22fba7768364f27ebc6 187 Gene3D G3DSA:1.10.10.10 106 186 1.8E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_001450 eb2683cb8b6abf16cd8ca6900f800e2d 423 Pfam PF03222 Tryptophan/tyrosine permease family 35 417 1.4E-10 T 14-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 D172_020860 94e8bba77718b1dbdba8df779433ec92 385 Pfam PF03594 Benzoate membrane transport protein 9 380 2.8E-131 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 D172_020860 94e8bba77718b1dbdba8df779433ec92 385 TIGRFAM TIGR00843 benE: benzoate transporter 11 380 2.1E-113 T 14-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 D172_011080 100d61879280ecf76b7e1ca845dafa9f 108 Gene3D G3DSA:1.20.120.910 1 108 2.1E-12 T 14-10-2018 D172_003030 b4bf9c8533882cdece70c2438a0d12b1 391 Gene3D G3DSA:3.40.50.12170 26 391 1.0E-143 T 14-10-2018 D172_003030 b4bf9c8533882cdece70c2438a0d12b1 391 Pfam PF07075 Protein of unknown function (DUF1343) 49 390 2.0E-124 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 D172_003030 b4bf9c8533882cdece70c2438a0d12b1 391 PIRSF PIRSF016719 1 391 5.8E-106 T 14-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 D172_008865 c0a8394eb4cc6e4d39b85d4f989b8fb4 138 Gene3D G3DSA:1.10.720.30 16 75 4.0E-26 T 14-10-2018 IPR036361 SAP domain superfamily D172_008865 c0a8394eb4cc6e4d39b85d4f989b8fb4 138 Pfam PF09905 DNA-binding protein VF530 8 70 6.9E-31 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 D172_013820 37180a0d44bc8119cfa41171872c8270 247 Pfam PF04172 LrgB-like family 35 240 8.9E-60 T 14-10-2018 IPR007300 CidB/LrgB family D172_000525 9b6504c3fc94cb561a821db3ae4ef86a 437 SUPERFAMILY SSF56935 87 437 1.81E-7 T 14-10-2018 D172_000525 9b6504c3fc94cb561a821db3ae4ef86a 437 Pfam PF07396 Phosphate-selective porin O and P 90 247 8.7E-7 T 14-10-2018 IPR010870 Phosphate-selective porin O/P D172_000790 fb81742befdfc56f5ea6db46b7542a32 369 Pfam PF07219 HemY protein N-terminus 26 131 1.5E-13 T 14-10-2018 IPR010817 HemY, N-terminal D172_016655 a0308f17c24586b9f61aa61ebdcf2184 299 Gene3D G3DSA:1.10.10.10 7 93 1.0E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily D172_016655 a0308f17c24586b9f61aa61ebdcf2184 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 1.5E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 D172_016655 a0308f17c24586b9f61aa61ebdcf2184 299 SUPERFAMILY SSF46785 7 91 7.46E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily D172_016655 a0308f17c24586b9f61aa61ebdcf2184 299 Pfam PF03466 LysR substrate binding domain 94 292 9.8E-23 T 14-10-2018 IPR005119 LysR, substrate-binding D172_016655 a0308f17c24586b9f61aa61ebdcf2184 299 Gene3D G3DSA:3.40.190.290 96 292 3.3E-29 T 14-10-2018 D172_016655 a0308f17c24586b9f61aa61ebdcf2184 299 SUPERFAMILY SSF53850 94 297 1.36E-28 T 14-10-2018 D172_008550 b66a09a6a07f8192b162f2dca330bbb4 346 Gene3D G3DSA:3.20.20.70 7 318 3.2E-132 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_008550 b66a09a6a07f8192b162f2dca330bbb4 346 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 223 313 1.7E-20 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D172_008550 b66a09a6a07f8192b162f2dca330bbb4 346 TIGRFAM TIGR00433 bioB: biotin synthase 17 313 5.2E-126 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D172_008550 b66a09a6a07f8192b162f2dca330bbb4 346 PIRSF PIRSF001619 1 322 8.5E-137 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D172_008550 b66a09a6a07f8192b162f2dca330bbb4 346 Pfam PF04055 Radical SAM superfamily 53 199 6.2E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 D172_008550 b66a09a6a07f8192b162f2dca330bbb4 346 Hamap MF_01694 Biotin synthase [bioB]. 8 316 41.945 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D172_008550 b66a09a6a07f8192b162f2dca330bbb4 346 SUPERFAMILY SSF102114 8 316 1.57E-92 T 14-10-2018 D172_008550 b66a09a6a07f8192b162f2dca330bbb4 346 SMART SM00729 46 258 1.8E-38 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 D172_008550 b66a09a6a07f8192b162f2dca330bbb4 346 SMART SM00876 223 315 1.4E-47 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 D172_008250 cab835348bb647a1486dea4181b2adc6 176 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 176 35.74 T 14-10-2018 IPR009809 Cell division protein ZapC D172_008250 cab835348bb647a1486dea4181b2adc6 176 Pfam PF07126 Cell-division protein ZapC 1 168 4.3E-50 T 14-10-2018 IPR009809 Cell division protein ZapC D172_008250 cab835348bb647a1486dea4181b2adc6 176 PIRSF PIRSF010252 1 176 1.4E-55 T 14-10-2018 IPR009809 Cell division protein ZapC D172_003205 86c2b54704ec0d97fdbaa1d49c26ceaf 206 Pfam PF01914 MarC family integral membrane protein 2 199 3.4E-44 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 D172_003205 86c2b54704ec0d97fdbaa1d49c26ceaf 206 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 196 7.9E-39 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 D172_013005 dad52f317d91c57610decf7495010e92 135 SUPERFAMILY SSF53850 17 132 5.97E-16 T 14-10-2018 D172_013005 dad52f317d91c57610decf7495010e92 135 Gene3D G3DSA:3.40.190.10 20 134 1.1E-13 T 14-10-2018 D172_002480 4ebdc79d985caf6fe67e210fea187b19 308 SUPERFAMILY SSF103481 45 146 9.81E-8 T 14-10-2018 D172_002480 4ebdc79d985caf6fe67e210fea187b19 308 SUPERFAMILY SSF103481 197 295 4.84E-14 T 14-10-2018 D172_002480 4ebdc79d985caf6fe67e210fea187b19 308 Pfam PF00892 EamA-like transporter family 160 289 3.9E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_002480 4ebdc79d985caf6fe67e210fea187b19 308 Pfam PF00892 EamA-like transporter family 9 142 3.1E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_012325 454ac22c6c8aa39aef0c6ae5526e3140 71 Pfam PF09493 Tryptophan-rich protein (DUF2389) 12 71 1.0E-20 T 14-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich D172_012325 454ac22c6c8aa39aef0c6ae5526e3140 71 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 10 71 1.5E-21 T 14-10-2018 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich D172_013160 d15d1667ddf43d54b5b0814bef38ef75 119 Gene3D G3DSA:3.30.1450.10 34 116 1.4E-24 T 14-10-2018 IPR037873 BamE-like D172_013160 d15d1667ddf43d54b5b0814bef38ef75 119 Pfam PF04355 SmpA / OmlA family 35 103 1.9E-23 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 D172_013160 d15d1667ddf43d54b5b0814bef38ef75 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 3 119 26.006 T 14-10-2018 IPR026592 Outer membrane protein assembly factor BamE D172_002230 cbae3249044e6775564f3d9c002eceef 143 Pfam PF00581 Rhodanese-like domain 43 135 4.4E-18 T 14-10-2018 IPR001763 Rhodanese-like domain D172_002230 cbae3249044e6775564f3d9c002eceef 143 Gene3D G3DSA:3.40.250.10 24 141 1.1E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily D172_002230 cbae3249044e6775564f3d9c002eceef 143 SUPERFAMILY SSF52821 17 142 4.98E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily D172_002230 cbae3249044e6775564f3d9c002eceef 143 SMART SM00450 40 138 6.3E-18 T 14-10-2018 IPR001763 Rhodanese-like domain D172_019275 af32fa0c31a64009692be470d45d51cd 284 SUPERFAMILY SSF51069 138 276 1.14E-6 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily D172_000510 aebb3e88252b6f4d5abc637a170b1eda 169 PIRSF PIRSF014995 4 169 4.0E-47 T 14-10-2018 IPR014469 Protein of unknown function DUF2271 D172_000510 aebb3e88252b6f4d5abc637a170b1eda 169 Gene3D G3DSA:2.60.40.4070 86 139 3.6E-6 T 14-10-2018 D172_000510 aebb3e88252b6f4d5abc637a170b1eda 169 Pfam PF10029 Predicted periplasmic protein (DUF2271) 30 159 5.0E-45 T 14-10-2018 IPR014469 Protein of unknown function DUF2271 D172_003340 0315cab83533bdff4f33db0cc4b2c12f 68 Pfam PF04024 PspC domain 10 63 6.4E-11 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal D172_001005 4e74d1314a7c204780c69a4f50eda6e5 338 Pfam PF02163 Peptidase family M50 206 241 1.2E-6 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 D172_008645 ae04c9d134279b922eb33de628c8f87e 482 Pfam PF12679 ABC-2 family transporter protein 11 269 4.6E-11 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 D172_008645 ae04c9d134279b922eb33de628c8f87e 482 Pfam PF12040 Domain of unknown function (DUF3526) 276 444 4.7E-43 T 14-10-2018 IPR021913 Protein of unknown function DUF3526 D172_014560 b2526aa37425dc6cc7d78cc18cc62751 411 Pfam PF12576 Protein of unknown function (DUF3754) 159 312 8.1E-38 T 14-10-2018 IPR022227 Protein of unknown function DUF3754 D172_017165 6369597e22e87c954c8264781c054cdb 196 Pfam PF06080 Protein of unknown function (DUF938) 3 195 1.6E-66 T 14-10-2018 IPR010342 Protein of unknown function DUF938 D172_017165 6369597e22e87c954c8264781c054cdb 196 Gene3D G3DSA:3.40.50.150 1 194 2.6E-16 T 14-10-2018 D172_017165 6369597e22e87c954c8264781c054cdb 196 SUPERFAMILY SSF53335 15 188 2.92E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_016850 5ff5fe1d9a3d8a0550bd718539204904 225 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 114 208 8.2E-14 T 14-10-2018 IPR032871 AHH domain-containing protein D172_013435 d4907eca205453726b365a42b9d2012d 110 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 19 109 2.7E-18 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 D172_013435 d4907eca205453726b365a42b9d2012d 110 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 110 16.233 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 D172_013435 d4907eca205453726b365a42b9d2012d 110 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 95 108 1.4E-12 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 D172_013435 d4907eca205453726b365a42b9d2012d 110 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 39 55 1.4E-12 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 D172_013435 d4907eca205453726b365a42b9d2012d 110 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 74 90 1.4E-12 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 D172_013435 d4907eca205453726b365a42b9d2012d 110 Pfam PF02049 Flagellar hook-basal body complex protein FliE 24 110 5.5E-29 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 D172_015130 83223712198d3f878a05101f2c37c965 257 Pfam PF11101 Protein of unknown function (DUF2884) 26 253 3.8E-65 T 14-10-2018 IPR021307 Protein of unknown function DUF2884 D172_019145 ec9c291b70fb2d53c56c5fed5e7dc2dd 363 Pfam PF14319 Transposase zinc-binding domain 9 114 2.9E-31 T 14-10-2018 IPR026889 Transposase zinc-binding domain D172_019145 ec9c291b70fb2d53c56c5fed5e7dc2dd 363 Pfam PF04986 Putative transposase 138 302 2.0E-48 T 14-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 D172_013070 29e93671f596b8b265afb4d73147b1e4 285 Pfam PF06629 MltA-interacting protein MipA 50 285 8.6E-39 T 14-10-2018 IPR010583 MltA-interacting MipA D172_000430 429aba2623fbfcd4abcf8c773708048b 464 SUPERFAMILY SSF82171 51 364 4.32E-7 T 14-10-2018 D172_015800 13ff2f85c4f982f29ae82f5be86eaafb 306 Pfam PF01963 TraB family 30 290 3.6E-65 T 14-10-2018 IPR002816 Pheromone shutdown, TraB D172_015975 ad76c2177a71fca8badb71cc154ce279 256 Gene3D G3DSA:3.40.50.720 4 255 3.4E-38 T 14-10-2018 D172_015975 ad76c2177a71fca8badb71cc154ce279 256 SUPERFAMILY SSF51735 7 237 8.74E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily D172_006595 dfecefb6a9005c87231db30241a1af95 304 Pfam PF00882 Zinc dependent phospholipase C 7 189 1.2E-25 T 14-10-2018 IPR029002 Phospholipase C/D Reactome: R-HSA-163125 D172_016515 0d83624767a1a4b839d71107b09739b2 423 Pfam PF01554 MatE 1 159 1.9E-23 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D172_016515 0d83624767a1a4b839d71107b09739b2 423 Pfam PF01554 MatE 225 378 3.3E-15 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D172_016515 0d83624767a1a4b839d71107b09739b2 423 TIGRFAM TIGR00797 matE: MATE efflux family protein 1 394 4.2E-79 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 D172_010740 636aafdbf488ff1453e0f823a731a689 252 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 134 216 3.2E-13 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D172_010740 636aafdbf488ff1453e0f823a731a689 252 SUPERFAMILY SSF56214 134 195 5.1E-11 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D172_010740 636aafdbf488ff1453e0f823a731a689 252 Gene3D G3DSA:3.90.470.20 134 239 2.1E-11 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 D172_017505 efb0dea63ba0dbc762020c0df31bc961 123 Pfam PF06961 Protein of unknown function (DUF1294) 38 96 3.1E-21 T 14-10-2018 IPR010718 Protein of unknown function DUF1294 D172_002895 65c53c46670760ee5c2e44b810c3a6e8 334 Gene3D G3DSA:1.10.3470.10 5 334 8.0E-97 T 14-10-2018 IPR037294 ABC transporter, BtuC-like D172_002895 65c53c46670760ee5c2e44b810c3a6e8 334 Pfam PF01032 FecCD transport family 20 327 8.0E-91 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 D172_002895 65c53c46670760ee5c2e44b810c3a6e8 334 SUPERFAMILY SSF81345 4 327 4.18E-78 T 14-10-2018 IPR037294 ABC transporter, BtuC-like D172_016360 62ad0d578d71cee6cb096e631f46f78b 205 PIRSF PIRSF006324 1 204 3.3E-45 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D172_016360 62ad0d578d71cee6cb096e631f46f78b 205 Pfam PF01810 LysE type translocator 15 203 2.3E-36 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D172_005220 eea0da1103c371d707ef1f761e8a6a96 457 SUPERFAMILY SSF69318 122 441 6.67E-24 T 14-10-2018 D172_007360 0b73c4bc73450e507bc7003a2cacc2eb 284 SUPERFAMILY SSF103088 139 255 1.31E-23 T 14-10-2018 IPR036737 OmpA-like domain superfamily D172_007360 0b73c4bc73450e507bc7003a2cacc2eb 284 Pfam PF00691 OmpA family 155 244 1.2E-13 T 14-10-2018 IPR006665 OmpA-like domain D172_007360 0b73c4bc73450e507bc7003a2cacc2eb 284 PRINTS PR01021 OMPA domain signature 200 216 1.3E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D172_007360 0b73c4bc73450e507bc7003a2cacc2eb 284 PRINTS PR01021 OMPA domain signature 185 200 1.3E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D172_007360 0b73c4bc73450e507bc7003a2cacc2eb 284 PRINTS PR01021 OMPA domain signature 155 177 1.3E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 D172_007360 0b73c4bc73450e507bc7003a2cacc2eb 284 Gene3D G3DSA:3.30.1330.60 137 257 5.2E-23 T 14-10-2018 IPR036737 OmpA-like domain superfamily D172_011585 450a8da326d98e6399b3eb2b88979672 79 SUPERFAMILY SSF47598 4 45 1.45E-7 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 D172_011585 450a8da326d98e6399b3eb2b88979672 79 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 1 78 2.9E-31 T 14-10-2018 IPR022789 Antitoxin ParD D172_011585 450a8da326d98e6399b3eb2b88979672 79 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 4 70 1.5E-27 T 14-10-2018 IPR022789 Antitoxin ParD D172_011585 450a8da326d98e6399b3eb2b88979672 79 Gene3D G3DSA:1.10.8.1250 10 79 1.8E-22 T 14-10-2018 IPR038296 Antitoxin ParD superfamily D172_005700 49b5614888668b7121d04aab025db04e 253 Pfam PF01925 Sulfite exporter TauE/SafE 19 243 1.2E-20 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 D172_002940 1ac11a2651191b185dbdcf8fd5943937 243 SUPERFAMILY SSF82171 107 202 2.16E-5 T 14-10-2018 D172_015400 9f1c73ac17b89ddd83b47f395f782e52 287 Gene3D G3DSA:3.90.550.10 1 287 2.6E-83 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_015400 9f1c73ac17b89ddd83b47f395f782e52 287 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 2.2E-151 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 D172_015400 9f1c73ac17b89ddd83b47f395f782e52 287 Pfam PF00483 Nucleotidyl transferase 2 238 4.9E-69 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 D172_015400 9f1c73ac17b89ddd83b47f395f782e52 287 SUPERFAMILY SSF53448 1 285 3.15E-90 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases D172_006585 672a09b2e9b1b355a9d31dc745e2795a 218 Pfam PF13707 RloB-like protein 32 213 3.3E-36 T 14-10-2018 IPR025591 RloB-like protein D172_009960 0d6907e7c01d31b1262523599152151a 114 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 112 8.4E-31 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR D172_009960 0d6907e7c01d31b1262523599152151a 114 Gene3D G3DSA:3.40.30.10 1 113 2.6E-39 T 14-10-2018 D172_009960 0d6907e7c01d31b1262523599152151a 114 SUPERFAMILY SSF52833 1 113 7.96E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_009960 0d6907e7c01d31b1262523599152151a 114 Pfam PF03960 ArsC family 5 112 5.5E-17 T 14-10-2018 IPR006660 Arsenate reductase-like D172_004025 e6afc5b9d4c0b8d51902173cf5d9c663 164 Pfam PF06271 RDD family 8 144 2.3E-18 T 14-10-2018 IPR010432 RDD D172_004130 ba3a79529577f8ea714d5a533106505d 63 SUPERFAMILY SSF47384 2 58 2.75E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 D172_014875 3639e5d233446bc9b7c1a14a48c48b3e 226 SUPERFAMILY SSF56349 35 113 5.0E-6 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 D172_017690 f2203e24da1be90587b1e0c3d5d83c91 157 SUPERFAMILY SSF52218 10 149 1.86E-25 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_017690 f2203e24da1be90587b1e0c3d5d83c91 157 Gene3D G3DSA:3.40.50.360 6 157 7.5E-28 T 14-10-2018 IPR029039 Flavoprotein-like superfamily D172_017690 f2203e24da1be90587b1e0c3d5d83c91 157 Pfam PF03358 NADPH-dependent FMN reductase 10 148 3.2E-14 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 D172_003955 4d6c31470f6d55727636537804c2aa8f 79 Pfam PF11173 Protein of unknown function (DUF2960) 1 79 1.3E-38 T 14-10-2018 IPR021343 Protein of unknown function DUF2960 D172_016480 322c6274182fb0e6a4cc1f33507ab12c 284 Pfam PF12118 SprA-related family 19 222 9.4E-51 T 14-10-2018 IPR021973 SprA-related family D172_016645 e46e9ee86851fe82394e9db0bb58cd2d 410 Pfam PF05940 NnrS protein 23 404 8.8E-95 T 14-10-2018 IPR010266 NnrS D172_018445 2e010705affae49911df887addf61e4a 235 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 97 175 2.4E-5 T 14-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 D172_000515 981d1caaf7e511c05354e5189511f2ea 210 Pfam PF16357 Putative PepSY_TM-like 12 204 6.3E-66 T 14-10-2018 IPR032307 Putative PepSY TM-like protein D172_020485 79697d94e95f23072f231df75e059072 218 Pfam PF13649 Methyltransferase domain 44 138 2.4E-11 T 14-10-2018 D172_020485 79697d94e95f23072f231df75e059072 218 SUPERFAMILY SSF53335 7 211 1.91E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_020485 79697d94e95f23072f231df75e059072 218 Gene3D G3DSA:3.40.50.150 3 218 1.0E-32 T 14-10-2018 D172_019415 e4ad266382d7515bd4ad9be3d8e30ebe 405 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 3 100 1.6E-5 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 D172_019415 e4ad266382d7515bd4ad9be3d8e30ebe 405 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 152 283 2.8E-5 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 D172_013815 1da4f45e687bd06ab98e94362ab9ec4f 117 Pfam PF03788 LrgA family 16 105 8.9E-19 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 D172_013670 487e545e22331e346b7d97cf88fd9b90 269 Pfam PF01925 Sulfite exporter TauE/SafE 12 266 3.4E-50 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 D172_017205 d1aa8c7c86ed502aa64f63b4330632dc 212 Pfam PF13785 Domain of unknown function (DUF4178) 39 194 7.1E-6 T 14-10-2018 IPR025235 Domain of unknown function DUF4178 D172_016420 c77c17afe91c47dd6d6539b06d6bc859 410 SUPERFAMILY SSF56935 59 408 1.77E-9 T 14-10-2018 D172_011155 5820c31bf2bb5b22ad6bd5f833b1b949 158 Pfam PF04982 HPP family 36 141 2.3E-32 T 14-10-2018 IPR007065 HPP D172_004480 c6e4f68db2383374e8ba9202e87c8f39 206 Pfam PF10144 Bacterial virulence factor haemolysin 18 154 8.4E-13 T 14-10-2018 IPR019305 Uncharacterised protein family Smp D172_004980 fbd9559fbfc47b61985801d9bf15cddc 196 SUPERFAMILY SSF50475 11 180 4.87E-17 T 14-10-2018 D172_004980 fbd9559fbfc47b61985801d9bf15cddc 196 Gene3D G3DSA:2.30.110.10 1 196 4.5E-39 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 D172_004980 fbd9559fbfc47b61985801d9bf15cddc 196 Pfam PF04299 Putative FMN-binding domain 1 151 4.0E-27 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type D172_016635 8870ef2ed1cc163b58950beb103f40dc 217 Pfam PF04231 Endonuclease I 38 210 5.2E-30 T 14-10-2018 IPR007346 Endonuclease I GO:0004518 D172_016635 8870ef2ed1cc163b58950beb103f40dc 217 SUPERFAMILY SSF54060 23 206 8.95E-58 T 14-10-2018 D172_000030 eafa1d9570ecae7e4dda46e88fffbdcd 145 Pfam PF01152 Bacterial-like globin 25 142 4.8E-29 T 14-10-2018 IPR001486 Truncated hemoglobin GO:0019825 D172_000030 eafa1d9570ecae7e4dda46e88fffbdcd 145 SUPERFAMILY SSF46458 23 144 3.7E-30 T 14-10-2018 IPR009050 Globin-like superfamily D172_000030 eafa1d9570ecae7e4dda46e88fffbdcd 145 Gene3D G3DSA:1.10.490.10 21 145 1.0E-39 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 D172_010635 0c029aa642a9b9818de4095844259c20 59 Gene3D G3DSA:3.30.920.30 1 59 1.9E-28 T 14-10-2018 IPR038570 HicA superfamily D172_010635 0c029aa642a9b9818de4095844259c20 59 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 59 1.0E-22 T 14-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 D172_010635 0c029aa642a9b9818de4095844259c20 59 SUPERFAMILY SSF54786 2 59 4.32E-19 T 14-10-2018 D172_020140 6593bfeb5314b7cb78ba1480f8e4def8 470 Pfam PF02486 Replication initiation factor 246 440 2.6E-25 T 14-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 D172_008450 a218eac27034f5d27ce430076eabe45f 270 Pfam PF11227 Protein of unknown function (DUF3025) 57 266 5.1E-79 T 14-10-2018 IPR021390 Protein of unknown function DUF3025 D172_003270 4f11f6d879f514b7a0fbe0918c462769 236 Gene3D G3DSA:3.40.50.150 2 236 5.9E-42 T 14-10-2018 D172_003270 4f11f6d879f514b7a0fbe0918c462769 236 Pfam PF01234 NNMT/PNMT/TEMT family 2 215 4.3E-22 T 14-10-2018 IPR000940 Methyltransferase, NNMT/PNMT/TEMT GO:0008168 D172_003270 4f11f6d879f514b7a0fbe0918c462769 236 SUPERFAMILY SSF53335 2 216 1.09E-14 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase D172_006190 9eff019c52971495ab77cbd781bc9be1 373 Pfam PF03929 PepSY-associated TM region 11 368 1.2E-46 T 14-10-2018 IPR005625 PepSY-associated TM protein D172_014790 16d4b40ad4afcb9faa97faea01ba57b6 122 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 6 116 8.3E-46 T 14-10-2018 IPR018714 Protein of unknown function DUF2237 D172_014790 16d4b40ad4afcb9faa97faea01ba57b6 122 Gene3D G3DSA:3.30.56.110 1 122 6.6E-48 T 14-10-2018 D172_020210 417f2424d2e7d3bd67f99227c8b7ae7e 320 Gene3D G3DSA:1.10.10.2830 153 272 9.6E-11 T 14-10-2018 D172_005090 fb80cd93af06e252ac04d0b70402d9d9 106 Gene3D G3DSA:3.40.50.1820 5 102 6.4E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_005090 fb80cd93af06e252ac04d0b70402d9d9 106 SUPERFAMILY SSF53474 12 97 3.99E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_005090 fb80cd93af06e252ac04d0b70402d9d9 106 Pfam PF00756 Putative esterase 12 99 4.3E-7 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 D172_008035 a984a6bb2c1ae77d7dc1ee64ff2af792 373 Pfam PF12698 ABC-2 family transporter protein 26 363 6.4E-36 T 14-10-2018 D172_008880 cff88ec14a6de694f4d72e82b1d57b70 176 ProSitePatterns PS00018 EF-hand calcium-binding domain. 57 69 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site D172_007325 757f978522e716e1eb7177c2681a8682 451 Pfam PF04932 O-Antigen ligase 238 376 5.9E-19 T 14-10-2018 IPR007016 O-antigen ligase-related D172_012730 21e4bde46f6f485e06f8ca7809bfef56 133 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 4 133 1.9E-48 T 14-10-2018 IPR014320 Phage shock protein, PspC D172_012730 21e4bde46f6f485e06f8ca7809bfef56 133 Pfam PF04024 PspC domain 5 63 2.0E-17 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal D172_009655 24d8c266c87d281a4a3ce26ed879f851 394 Pfam PF07786 Protein of unknown function (DUF1624) 9 230 5.3E-9 T 14-10-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-2206291|Reactome: R-HSA-6798695 D172_016925 106f8c8965ac9a97ecfbf6183499b7c0 224 Pfam PF02036 SCP-2 sterol transfer family 34 132 5.3E-15 T 14-10-2018 IPR003033 SCP2 sterol-binding domain D172_016925 106f8c8965ac9a97ecfbf6183499b7c0 224 SUPERFAMILY SSF55718 21 139 1.7E-8 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily D172_007500 023da51eb608815e8e386df4753ad353 123 Pfam PF13564 DoxX-like family 14 106 1.2E-16 T 14-10-2018 IPR032808 DoxX family D172_017955 d81552c86ecb7bd845accfdfdb7fcf73 306 SUPERFAMILY SSF103481 51 144 4.05E-5 T 14-10-2018 D172_017955 d81552c86ecb7bd845accfdfdb7fcf73 306 Pfam PF00892 EamA-like transporter family 162 289 2.3E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 D172_018840 9d98309ff3dac5f3776837b9262808ae 132 Pfam PF04134 Protein of unknown function, DUF393 3 111 1.9E-21 T 14-10-2018 IPR007263 Protein of unknown function DUF393 D172_004075 2019b011c5e03af5af577d0b36d9459c 218 Pfam PF06912 Protein of unknown function (DUF1275) 13 207 3.4E-32 T 14-10-2018 IPR010699 Protein of unknown function DUF1275 D172_010605 64bd213849b9ecaa4503b22266662549 132 Pfam PF11351 Holin of 3TMs, for gene-transfer release 16 119 2.7E-15 T 14-10-2018 IPR021497 Holin of 3TMs, for gene-transfer release D172_018900 e2d1ce0122dbc3a2ed52c404cbd87103 102 Pfam PF09905 DNA-binding protein VF530 6 67 5.9E-33 T 14-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 D172_018900 e2d1ce0122dbc3a2ed52c404cbd87103 102 Gene3D G3DSA:1.10.720.30 13 71 4.1E-28 T 14-10-2018 IPR036361 SAP domain superfamily D172_004670 ed078f3b6096efa7e908969275f0f971 389 SUPERFAMILY SSF56935 25 389 1.25E-30 T 14-10-2018 D172_002100 47dd4b6d442811322c701e894aef64d4 212 PIRSF PIRSF006324 2 212 7.2E-49 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D172_002100 47dd4b6d442811322c701e894aef64d4 212 Pfam PF01810 LysE type translocator 16 212 5.9E-37 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 D172_004035 1171a1fee93e9b35746e6f4939b62e62 127 Pfam PF08896 Domain of unknown function (DUF1842) 6 113 2.3E-7 T 14-10-2018 IPR014992 Domain of unknown function DUF1842 D172_006460 b4b64d77bc9b7820e7e29d5d2e94a26a 266 Pfam PF11207 Protein of unknown function (DUF2989) 14 215 1.4E-68 T 14-10-2018 IPR021372 Protein of unknown function DUF2989 D172_003075 a6204074ffd207eaa6d2c67eaaf1fb3b 168 Pfam PF11286 Protein of unknown function (DUF3087) 1 165 7.3E-63 T 14-10-2018 IPR021438 Protein of unknown function DUF3087 D172_007020 38d5a39fc1e274c4e3722fc1d929b075 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 3.7E-15 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD D172_008835 9c6cf6b903fc51d61bc5a52e94bf4cf4 272 Gene3D G3DSA:2.70.70.10 110 267 1.8E-40 T 14-10-2018 IPR011055 Duplicated hybrid motif D172_008835 9c6cf6b903fc51d61bc5a52e94bf4cf4 272 Pfam PF01551 Peptidase family M23 165 260 1.6E-27 T 14-10-2018 IPR016047 Peptidase M23 D172_008835 9c6cf6b903fc51d61bc5a52e94bf4cf4 272 SUPERFAMILY SSF51261 75 263 3.84E-46 T 14-10-2018 IPR011055 Duplicated hybrid motif D172_008370 ad2326b44206eb26250674f543481592 356 Pfam PF11281 Protein of unknown function (DUF3083) 40 354 1.2E-139 T 14-10-2018 IPR021433 Protein of unknown function DUF3083 D172_009165 28b06215e990cba679eb9532e7802dd8 93 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 78 8.4E-15 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 D172_011825 87623eac52db18a422b97e2cb501c3b0 67 Pfam PF07869 Protein of unknown function (DUF1656) 5 59 5.2E-16 T 14-10-2018 IPR012451 Protein of unknown function DUF1656 D172_017750 581ed7d528cf515569cceb349b2b2415 140 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 9 134 2.2E-25 T 14-10-2018 IPR018893 Type VIII secretion system, CsgF D172_014755 d951e8f6025daa36380b0d853cb4ba04 379 Gene3D G3DSA:3.20.20.70 9 379 4.2E-131 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 D172_014755 d951e8f6025daa36380b0d853cb4ba04 379 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 11 352 1.6E-86 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 D172_014755 d951e8f6025daa36380b0d853cb4ba04 379 SUPERFAMILY SSF51395 7 378 3.36E-120 T 14-10-2018 D172_015270 02bed45dabcabe03628f56eaceb31ec1 632 Pfam PF01757 Acyltransferase family 5 325 2.3E-25 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 D172_015270 02bed45dabcabe03628f56eaceb31ec1 632 SUPERFAMILY SSF52266 410 626 1.75E-5 T 14-10-2018 D172_010750 638312ff4151083d983da90d884f1eb9 415 Pfam PF03600 Citrate transporter 14 362 1.0E-28 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 D172_016760 bd9058061d41be058d6b8bc9275cd29c 137 Pfam PF09523 Protein of unknown function (DUF2390) 9 115 1.2E-24 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 D172_016760 bd9058061d41be058d6b8bc9275cd29c 137 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 8 116 2.2E-20 T 14-10-2018 IPR012659 Conserved hypothetical protein CHP02444 D172_004635 524eafc1f16e9046ed2689f9b725baf7 192 Pfam PF09335 SNARE associated Golgi protein 55 157 4.3E-14 T 14-10-2018 IPR032816 SNARE associated Golgi protein D172_012090 82d8c3991e90450a89e31882e7961f1e 336 Pfam PF06271 RDD family 215 312 9.8E-17 T 14-10-2018 IPR010432 RDD D172_007210 11750f20af46ce5169bcb27d2e87b32c 152 Pfam PF02391 MoaE protein 8 120 1.3E-34 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 D172_007210 11750f20af46ce5169bcb27d2e87b32c 152 Gene3D G3DSA:3.90.1170.40 1 150 4.7E-50 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 D172_007210 11750f20af46ce5169bcb27d2e87b32c 152 SUPERFAMILY SSF54690 4 150 1.2E-49 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 D172_019290 a59c9b4063393dcd1124afb721c3141f 200 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 1 195 6.1E-49 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal D172_019730 3a6c9c2552cff185fa10a528737994e8 84 SUPERFAMILY SSF50494 8 80 1.02E-9 T 14-10-2018 IPR009003 Peptidase S1, PA clan D172_019730 3a6c9c2552cff185fa10a528737994e8 84 Gene3D G3DSA:2.40.10.10 4 63 9.5E-7 T 14-10-2018 D172_019730 3a6c9c2552cff185fa10a528737994e8 84 Pfam PF10459 Peptidase S46 2 82 3.4E-41 T 14-10-2018 IPR019500 Peptidase S46 GO:0008239|GO:0070009 D172_019935 98bda1e2c79c592c031013c6683a2755 204 Gene3D G3DSA:3.40.30.10 3 203 4.0E-54 T 14-10-2018 D172_019935 98bda1e2c79c592c031013c6683a2755 204 Pfam PF13743 Thioredoxin 11 179 5.2E-19 T 14-10-2018 D172_019935 98bda1e2c79c592c031013c6683a2755 204 SUPERFAMILY SSF52833 5 193 2.64E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily D172_018270 ea03db1e6172c9773c6446aeae850e71 390 Pfam PF06738 Putative threonine/serine exporter 1 232 1.2E-54 T 14-10-2018 IPR010619 Putative threonine/serine exporter D172_018270 ea03db1e6172c9773c6446aeae850e71 390 Pfam PF12821 Threonine/Serine exporter, ThrE 260 382 2.1E-13 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE D172_003850 40cd410157f025f97ec3630c85f6cd73 248 Pfam PF02517 CAAX protease self-immunity 140 244 2.7E-10 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 D172_000505 75c72651af8745466989f5160e454d9b 281 Pfam PF10670 Domain of unknown function (DUF4198) 24 256 1.3E-43 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 D172_005630 2eea9397713688ce3be4c7a318f02d78 219 Gene3D G3DSA:3.30.450.40 64 214 8.3E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily D172_005630 2eea9397713688ce3be4c7a318f02d78 219 SUPERFAMILY SSF55781 81 209 1.57E-14 T 14-10-2018 D172_001510 ba8b4b8a5b5de3267c939aff13024792 421 Gene3D G3DSA:3.40.50.300 253 421 4.4E-6 T 14-10-2018 D172_007450 839c6950e90a43e95f018c691c82db8c 248 Pfam PF07277 SapC 7 233 6.4E-67 T 14-10-2018 IPR010836 SapC D172_001885 9274d8b18820d311a1fd29a5163d7caf 76 Pfam PF06005 Cell division protein ZapB 1 70 3.4E-7 T 14-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 D172_017130 734d30144fce1302e22b05492eb45ba4 162 Pfam PF13511 Domain of unknown function (DUF4124) 15 49 3.1E-5 T 14-10-2018 IPR025392 Domain of unknown function DUF4124 D172_006620 96d7655363f2f16603d7e9512933cef5 207 SUPERFAMILY SSF52266 26 204 2.6E-45 T 14-10-2018 D172_006620 96d7655363f2f16603d7e9512933cef5 207 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 30 188 2.6E-19 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain D172_006620 96d7655363f2f16603d7e9512933cef5 207 Gene3D G3DSA:3.40.50.1110 23 207 3.0E-69 T 14-10-2018 IPR036514 SGNH hydrolase superfamily D172_010885 b55cbecd3379d74f92e943e11853dc93 262 SUPERFAMILY SSF111364 25 262 4.05E-35 T 14-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 D172_020345 40dd3ef0e403b2df30eb9fd4dd75e2b5 349 PIRSF PIRSF029594 11 348 1.8E-109 T 14-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 D172_020345 40dd3ef0e403b2df30eb9fd4dd75e2b5 349 Pfam PF11168 Protein of unknown function (DUF2955) 18 159 4.7E-43 T 14-10-2018 IPR022604 Protein of unknown function DUF2955 D172_019745 55c19d854b7831c55300e4c2a5d5df47 63 Pfam PF06945 Protein of unknown function (DUF1289) 17 55 6.9E-13 T 14-10-2018 IPR010710 Protein of unknown function DUF1289 D172_013100 3e3abcccf96992a7e204a19d9fef180f 247 Pfam PF07070 SpoOM protein 2 217 5.2E-69 T 14-10-2018 IPR009776 Sporulation stage 0, protein M D172_002875 0528426f97f28083a06c40c8e46dda2c 124 Pfam PF04219 Protein of unknown function, DUF 17 105 1.9E-32 T 14-10-2018 IPR007335 Protein of unknown function DUF413 D172_011835 027a215d08983fab87ae0e9b8fb7b3d0 340 Pfam PF01435 Peptidase family M48 153 339 4.6E-25 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 D172_011310 728ff31f0c0764377c5cc40e0b3de822 356 Pfam PF01594 AI-2E family transporter 20 345 1.1E-71 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like D172_007435 cb5a89af0eb8c69fe6d70c3a703bb14b 355 SUPERFAMILY SSF75005 41 351 6.52E-57 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily D172_007435 cb5a89af0eb8c69fe6d70c3a703bb14b 355 Pfam PF04616 Glycosyl hydrolases family 43 105 345 3.3E-31 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 D172_007435 cb5a89af0eb8c69fe6d70c3a703bb14b 355 Gene3D G3DSA:2.115.10.20 20 353 6.3E-102 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily D172_017275 48e07d19d490f922de6f35693e04b1c4 146 Pfam PF13689 Domain of unknown function (DUF4154) 2 142 5.3E-27 T 14-10-2018 IPR025293 YfiR-like D172_006240 8c4789f1a198db6c2294ab219c5e2ab2 634 SUPERFAMILY SSF52540 175 581 1.16E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase D172_001785 fd61ddcc94b8661b2700df9581a58caa 420 Gene3D G3DSA:3.40.190.10 57 354 2.1E-22 T 14-10-2018 D172_001785 fd61ddcc94b8661b2700df9581a58caa 420 SUPERFAMILY SSF53850 34 416 7.25E-48 T 14-10-2018 D172_001785 fd61ddcc94b8661b2700df9581a58caa 420 Gene3D G3DSA:3.40.190.10 164 301 2.1E-22 T 14-10-2018 D172_001785 fd61ddcc94b8661b2700df9581a58caa 420 Pfam PF13416 Bacterial extracellular solute-binding protein 82 328 9.7E-15 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein D172_018575 96935571423ab0d81d4db456e590f8a6 151 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 150 1.6E-8 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain D172_010185 ed6c9eb9d519f0b03f6fbf781f055033 213 Pfam PF02517 CAAX protease self-immunity 106 194 2.9E-13 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 D172_011830 717035b0bad7f07e0d3001c7f4240df0 369 Pfam PF05987 Bacterial protein of unknown function (DUF898) 26 360 7.9E-104 T 14-10-2018 IPR010295 Protein of unknown function DUF898 D172_008620 12fa19f7fe2bc5d8c2211f648bbf0203 324 SUPERFAMILY SSF143422 15 193 1.57E-19 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 D172_008620 12fa19f7fe2bc5d8c2211f648bbf0203 324 SMART SM01321 12 187 0.0053 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 D172_010685 734891b82eccb22a02da9a0dde8ecb14 111 Gene3D G3DSA:1.20.5.340 34 110 4.7E-6 T 14-10-2018 D172_018785 42bb42a99fad2d9a15844d356e0a9571 140 Pfam PF04134 Protein of unknown function, DUF393 15 124 2.9E-24 T 14-10-2018 IPR007263 Protein of unknown function DUF393 D172_016825 8a682650ba51e2cef6aa4332d272abc6 197 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 24 193 3.5E-26 T 14-10-2018 IPR018635 Uncharacterised protein family UPF0319 D172_006045 4ff33a2cabad8d5595862594aceeca3a 1229 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 890 1228 8.6E-58 T 14-10-2018 IPR007452 Translocation and assembly module TamB D172_020410 c723ad8bba33ff80e0118b26d65f7dd8 288 Pfam PF01758 Sodium Bile acid symporter family 12 196 1.4E-32 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 D172_020410 c723ad8bba33ff80e0118b26d65f7dd8 288 Gene3D G3DSA:1.20.1530.20 2 287 1.1E-70 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily D172_017905 d1cb57a2bfff3febb03b5a9dac40c788 120 Gene3D G3DSA:2.60.120.620 9 115 3.7E-5 T 14-10-2018 D172_005980 b9c796cad760efa8959b752db512a8f0 93 Pfam PF10719 Late competence development protein ComFB 8 85 9.5E-20 T 14-10-2018 IPR019657 Late competence development protein ComFB D172_003335 63f9499af628b9d8eb3c817949749afd 226 Pfam PF04012 PspA/IM30 family 2 217 4.2E-37 T 14-10-2018 IPR007157 PspA/IM30 D172_003885 fc290584b202ea3ff4958b020ba712d1 115 PIRSF PIRSF020555 1 115 6.9E-36 T 14-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats D172_003885 fc290584b202ea3ff4958b020ba712d1 115 Pfam PF16068 Domain of unknown function (DUF4810) 24 108 2.9E-29 T 14-10-2018 IPR014508 Uncharacterised conserved protein withTPR-like repeats D172_010550 e31f80df64f5f84632d053cb4e6d832e 149 Pfam PF10772 Protein of unknown function (DUF2597) 8 141 2.5E-45 T 14-10-2018 IPR019708 Bacteriophage HP1, Orf24 D172_002675 efd5dbb2579c07d1c6d3885701e1cd45 611 Pfam PF05960 Bacterial protein of unknown function (DUF885) 61 600 1.6E-176 T 14-10-2018 IPR010281 Protein of unknown function DUF885 D172_010465 5982a6d5a8a14d0a39ad69330e04af9b 134 Gene3D G3DSA:1.25.40.10 12 133 2.2E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 D172_016575 0756301ee5c4ef5815d554ec7e270b58 329 Pfam PF02628 Cytochrome oxidase assembly protein 7 319 6.7E-84 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 D172_007320 d586ca186dae892597e9fdddb757d386 470 Pfam PF01943 Polysaccharide biosynthesis protein 5 264 2.4E-12 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 D172_018995 bc498441dea14f4aea0465e962492f10 551 Pfam PF02470 MlaD protein 39 130 4.6E-10 T 14-10-2018 IPR003399 Mce/MlaD D172_018995 bc498441dea14f4aea0465e962492f10 551 Pfam PF02470 MlaD protein 285 388 7.2E-9 T 14-10-2018 IPR003399 Mce/MlaD D172_020155 da071a8a5ea8d717d0cd8abb6b6cff06 187 Pfam PF04366 Las17-binding protein actin regulator 99 187 3.2E-8 T 14-10-2018 IPR007461 Ysc84 actin-binding domain D172_017440 ab489bbb8e0c53ac73725d33527ec22b 444 Pfam PF07586 Protein of unknown function (DUF1552) 45 345 1.8E-27 T 14-10-2018 IPR011447 Protein of unknown function DUF1552 D172_019270 a90118e218d5726d0b9f0f70aa25034b 254 SUPERFAMILY SSF56529 7 251 8.65E-24 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 D172_019270 a90118e218d5726d0b9f0f70aa25034b 254 Gene3D G3DSA:3.90.850.10 4 253 2.0E-38 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 D172_008875 2e88698cee619a7c67eca86aeed57930 334 Pfam PF14240 YHYH protein 129 332 7.8E-68 T 14-10-2018 IPR025924 YHYH domain D172_005890 a4f1f48f14050b434770a97ba9fab472 517 Pfam PF03806 AbgT putative transporter family 15 513 2.7E-196 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 D172_011060 9ab3a8884d0b92df2a3f95f0aa2468f0 250 Pfam PF09836 Putative DNA-binding domain 5 91 8.1E-26 T 14-10-2018 IPR018640 Putative DNA-binding domain, bacteria D172_011060 9ab3a8884d0b92df2a3f95f0aa2468f0 250 Gene3D G3DSA:1.10.150.690 31 121 4.5E-30 T 14-10-2018 D172_015090 379b37d56f615e03afc4e9b5d4e510e1 257 Pfam PF11932 Protein of unknown function (DUF3450) 10 245 2.8E-28 T 14-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 D172_012350 262b28b71824396ad9c56b5303b0ada4 165 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 87 144 2.2E-22 T 14-10-2018 IPR018637 Domain of unknown function DUF2059 D172_017815 68a19f986d0f2bf7a910753804805493 79 SUPERFAMILY SSF57829 13 45 6.23E-5 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 D172_017675 192ccb47fce057fc562963ebb065e1ca 165 SUPERFAMILY SSF117074 25 114 1.83E-5 T 14-10-2018 D172_018185 725b7d35c92d79ed638002ed8d94d010 263 Pfam PF04116 Fatty acid hydroxylase superfamily 88 224 1.0E-25 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 D172_006865 6cdc983fb5d6b328761a95d12010595a 61 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 9 45 2.9E-11 T 14-10-2018 IPR008621 Cbb3-type cytochrome oxidase component D172_010295 7407d6ecc18cfdaf8ace469aaaad8f78 350 Pfam PF00487 Fatty acid desaturase 60 330 6.4E-30 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 D172_009935 0e564244b04cee27de05d00beeb363e4 148 Pfam PF04217 Protein of unknown function, DUF412 6 144 1.7E-51 T 14-10-2018 IPR007334 Uncharacterised protein family UPF0208 D172_020220 6aacdd0f655e3914b091fff4d69f5dcd 488 Pfam PF02646 RmuC family 178 473 1.4E-92 T 14-10-2018 IPR003798 DNA recombination RmuC D172_015665 1820918f27b6c961e491e0aac5f89d56 122 Pfam PF13699 Domain of unknown function (DUF4157) 28 89 6.1E-11 T 14-10-2018 IPR025295 Domain of unknown function DUF4157 D172_012735 a239a14a0f57afa561dd7acae5cf0803 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 6 76 6.5E-29 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 D172_012735 a239a14a0f57afa561dd7acae5cf0803 77 Pfam PF06667 Phage shock protein B 5 75 2.1E-31 T 14-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 D172_010570 17c01f3f1cbfeafbf97123a055c2d053 145 Pfam PF05926 Phage head completion protein (GPL) 76 136 4.9E-4 T 14-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 D172_014625 1bfb35a352d78869921cc70165faf00f 272 Pfam PF04116 Fatty acid hydroxylase superfamily 78 211 6.7E-30 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 D172_013630 d22c299aada9d64b50595ed0e708b426 223 PIRSF PIRSF028688 48 218 1.1E-35 T 14-10-2018 IPR014549 Flagellar protein FlgO D172_013630 d22c299aada9d64b50595ed0e708b426 223 PIRSF PIRSF028688 4 45 77.0 T 14-10-2018 IPR014549 Flagellar protein FlgO D172_002045 5d7f2ad30b6ea2c1048185076e6980e6 188 Pfam PF04972 BON domain 119 186 1.0E-16 T 14-10-2018 IPR007055 BON domain D172_002045 5d7f2ad30b6ea2c1048185076e6980e6 188 Pfam PF04972 BON domain 32 98 5.1E-17 T 14-10-2018 IPR007055 BON domain D172_002045 5d7f2ad30b6ea2c1048185076e6980e6 188 SMART SM00749 124 187 0.0015 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria D172_002045 5d7f2ad30b6ea2c1048185076e6980e6 188 SMART SM00749 39 99 17.0 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria D172_011105 f036311fe8aa95a5b126b2e8d1ad2f1a 174 Pfam PF01618 MotA/TolQ/ExbB proton channel family 64 165 5.7E-23 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel D172_003940 5bb48775d961b134c6579a5971e45865 312 Pfam PF13349 Putative adhesin 33 271 1.3E-11 T 14-10-2018 IPR025164 Putative adhesin D172_015100 a0889bbf23b1039a148c296bb086a117 126 Pfam PF01618 MotA/TolQ/ExbB proton channel family 45 112 4.3E-15 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel D172_010575 174d4f0ddfc1cfc829065b6dd724bb29 242 Pfam PF05944 Phage small terminase subunit 50 160 1.1E-19 T 14-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 D172_001905 ca575fe2f1d4ad55f981aad2040acdfb 204 Pfam PF04403 Paraquat-inducible protein A 57 194 1.9E-17 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like D172_001330 aca598cd89535079e231261f2fbc9f38 253 Pfam PF07277 SapC 7 226 1.6E-52 T 14-10-2018 IPR010836 SapC D172_012445 5b8da4d05011c0a884bcfa3956c097fc 337 SUPERFAMILY SSF48537 185 267 1.57E-7 T 14-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 D172_007600 970b22e5434364e4aa5bf5c53595f6ae 340 Pfam PF01757 Acyltransferase family 5 319 2.0E-29 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 D172_017105 4ab68fd75bdfeaf1d0d461b600a7b18b 264 Pfam PF11101 Protein of unknown function (DUF2884) 33 259 3.8E-69 T 14-10-2018 IPR021307 Protein of unknown function DUF2884 D172_017820 d9e0c226ff481bd49a62ad26128104cc 211 Pfam PF03458 UPF0126 domain 94 166 2.1E-17 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 D172_017820 d9e0c226ff481bd49a62ad26128104cc 211 Pfam PF03458 UPF0126 domain 8 81 3.1E-17 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 D172_008650 7b40f57f4d3624bde734664d6ea2f835 434 Pfam PF12040 Domain of unknown function (DUF3526) 275 416 5.9E-29 T 14-10-2018 IPR021913 Protein of unknown function DUF3526 D172_008085 79b469a783f3a3bed38ae412132c89b0 148 Pfam PF16108 Domain of unknown function (DUF4826) 18 143 6.8E-54 T 14-10-2018 IPR032251 Protein of unknown function DUF4826 D172_005325 dfe6e2d707939f578f8bb2323acb13b5 160 Pfam PF04519 Polymer-forming cytoskeletal 22 116 1.9E-22 T 14-10-2018 IPR007607 Bactofilin A/B D172_020995 72ba8a684e7799c2332cbcebce41ab0c 198 Pfam PF13875 Domain of unknown function (DUF4202) 7 187 1.5E-64 T 14-10-2018 IPR025255 Protein of unknown function DUF4202 D172_005870 a4365f6ab500d7a36aeda54384d3c397 111 Pfam PF13451 Probable zinc-ribbon domain 19 64 3.0E-12 T 14-10-2018 IPR025306 Probable zinc-binding domain D172_020325 080cde809bd1f8cfb739d26739735dca 207 SUPERFAMILY SSF103473 5 194 2.09E-5 T 14-10-2018 IPR036259 MFS transporter superfamily D172_004770 2c3a5638bef882ec2c6bbcaceecd5116 353 Pfam PF01595 Domain of unknown function DUF21 13 171 3.2E-35 T 14-10-2018 IPR002550 CNNM, transmembrane domain D172_010105 1d038e68aa9e270e60f5b160cd223bce 182 Gene3D G3DSA:3.40.50.1820 3 178 1.0E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold D172_015645 cbeeae0f1cd2b1952421c88b66a1b57a 133 Pfam PF11351 Holin of 3TMs, for gene-transfer release 17 120 1.5E-13 T 14-10-2018 IPR021497 Holin of 3TMs, for gene-transfer release D172_012135 886e6234406372094cfe6a8c279d93e5 152 Pfam PF07295 Zinc-ribbon containing domain 20 148 1.6E-34 T 14-10-2018 IPR009912 Zinc-ribbon containing domain D172_002755 327711931fba235340ee6e73ce43d625 190 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 100 175 3.7E-16 T 14-10-2018 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal D172_017835 0efdd1ccefbf2fa278e5b4db7f145159 279 Pfam PF04224 Protein of unknown function, DUF417 136 265 3.1E-17 T 14-10-2018 IPR007339 Inner membrane protein RclC-like