Daes_0003 SM00470 ParB-like nuclease domain Daes_0009 SM00347 helix_turn_helix multiple antibiotic resistance protein Daes_0012 SM01001 AIR carboxylase Daes_0026 SM00267 diguanylate cyclase Daes_0027 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_0029 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Daes_0029 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_0029 SM00091 PAS domain Daes_0029 SM00387 Histidine kinase-like ATPases Daes_0029 SM00388 His Kinase A (phosphoacceptor) domain Daes_0029 SM00448 cheY-homologous receiver domain Daes_0030 SM00062 Bacterial periplasmic substrate-binding proteins Daes_0031 SM00091 PAS domain Daes_0031 SM00387 Histidine kinase-like ATPases Daes_0031 SM00388 His Kinase A (phosphoacceptor) domain Daes_0033 SM00091 PAS domain Daes_0033 SM00387 Histidine kinase-like ATPases Daes_0033 SM00388 His Kinase A (phosphoacceptor) domain Daes_0033 SM00448 cheY-homologous receiver domain Daes_0036 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Daes_0036 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_0038 SM00052 Putative diguanylate phosphodiesterase Daes_0045 SM00138 Methyltransferase, chemotaxis proteins Daes_0056 SM00345 helix_turn_helix gluconate operon transcriptional repressor Daes_0062 SM00448 cheY-homologous receiver domain Daes_0064 SM00448 cheY-homologous receiver domain Daes_0065 SM00387 Histidine kinase-like ATPases Daes_0065 SM00388 His Kinase A (phosphoacceptor) domain Daes_0066 SM00448 cheY-homologous receiver domain Daes_0077 SM00861 Transketolase, pyrimidine binding domain Daes_0080 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_0090 SM00028 Tetratricopeptide repeats Daes_0108 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_0109 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_0110 SM00091 PAS domain Daes_0110 SM00387 Histidine kinase-like ATPases Daes_0110 SM00388 His Kinase A (phosphoacceptor) domain Daes_0111 SM01126 Daes_0111 Daes_0113 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_0113 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0113 SM01358 Daes_0113 Daes_0114 SM00387 Histidine kinase-like ATPases Daes_0114 SM00388 His Kinase A (phosphoacceptor) domain Daes_0114 SM00448 cheY-homologous receiver domain Daes_0115 SM00387 Histidine kinase-like ATPases Daes_0115 SM00388 His Kinase A (phosphoacceptor) domain Daes_0116 SM00448 cheY-homologous receiver domain Daes_0117 SM00387 Histidine kinase-like ATPases Daes_0117 SM00388 His Kinase A (phosphoacceptor) domain Daes_0118 SM00448 cheY-homologous receiver domain Daes_0120 SM00382 ATPases associated with a variety of cellular activities Daes_0127 SM00448 cheY-homologous receiver domain Daes_0129 SM01126 Daes_0129 Daes_0130 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Daes_0130 SM01232 Daes_0130 Daes_0141 SM00382 ATPases associated with a variety of cellular activities Daes_0142 SM00316 Ribosomal protein S1-like RNA-binding domain Daes_0142 SM00732 Likely ribonuclease with RNase H fold. Daes_0145 SM00091 PAS domain Daes_0145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0145 SM00387 Histidine kinase-like ATPases Daes_0145 SM00388 His Kinase A (phosphoacceptor) domain Daes_0147 SM00382 ATPases associated with a variety of cellular activities Daes_0147 SM00448 cheY-homologous receiver domain Daes_0154 SM00116 Domain in cystathionine beta-synthase and other proteins. Daes_0156 SM00091 PAS domain Daes_0156 SM00387 Histidine kinase-like ATPases Daes_0156 SM00388 His Kinase A (phosphoacceptor) domain Daes_0157 SM00448 cheY-homologous receiver domain Daes_0163 SM01126 Daes_0163 Daes_0165 SM00852 Probable molybdopterin binding domain Daes_0176 SM00316 Ribosomal protein S1-like RNA-binding domain Daes_0179 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_0186 SM00382 ATPases associated with a variety of cellular activities Daes_0190 SM00244 prohibitin homologues Daes_0191 SM00244 prohibitin homologues Daes_0200 SM00881 CoA binding domain Daes_0203 SM00260 Two component signalling adaptor domain Daes_0204 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_0204 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0207 SM01133 Daes_0207 Daes_0210 SM00567 E-Z type HEAT repeats Daes_0216 SM00903 Flavin reductase like domain Daes_0218 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_0218 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0219 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_0221 SM00220 Serine/Threonine protein kinases, catalytic domain Daes_0222 SM00967 RNA 2'-O ribose methyltransferase substrate binding Daes_0223 SM00257 Lysin motif Daes_0230 SM00341 Helicase and RNase D C-terminal Daes_0230 SM00487 DEAD-like helicases superfamily Daes_0230 SM00490 helicase superfamily c-terminal domain Daes_0230 SM00956 Daes_0230 Daes_0237 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Daes_0240 SM00382 ATPases associated with a variety of cellular activities Daes_0242 SM00387 Histidine kinase-like ATPases Daes_0253 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Daes_0253 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Daes_0253 SM00493 Daes_0253 Daes_0270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0270 SM00331 Sigma factor PP2C-like phosphatases Daes_0277 SM00836 DALR anticodon binding domain Daes_0277 SM01016 Arginyl tRNA synthetase N terminal dom Daes_0281 SM00345 helix_turn_helix gluconate operon transcriptional repressor Daes_0283 SM00382 ATPases associated with a variety of cellular activities Daes_0285 SM00387 Histidine kinase-like ATPases Daes_0285 SM00388 His Kinase A (phosphoacceptor) domain Daes_0293 SM00382 ATPases associated with a variety of cellular activities Daes_0294 SM00382 ATPases associated with a variety of cellular activities Daes_0296 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_0299 SM00876 Biotin and Thiamin Synthesis associated domain Daes_0301 SM00902 Iron hydrogenase small subunit Daes_0303 SM00342 helix_turn_helix, arabinose operon control protein Daes_0316 SM00840 Daes_0316 Daes_0329 SM00028 Tetratricopeptide repeats Daes_0338 SM00449 Domain in SPla and the RYanodine Receptor. Daes_0343 SM00052 Putative diguanylate phosphodiesterase Daes_0343 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_0343 SM00267 diguanylate cyclase Daes_0343 SM01049 Daes_0343 Daes_0344 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_0344 SM00091 PAS domain Daes_0344 SM00267 diguanylate cyclase Daes_0345 SM00267 diguanylate cyclase Daes_0355 SM00935 Outer membrane protein (OmpH-like) Daes_0356 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_0356 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0358 SM00028 Tetratricopeptide repeats Daes_0359 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_0359 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0359 SM00387 Histidine kinase-like ATPases Daes_0359 SM00388 His Kinase A (phosphoacceptor) domain Daes_0360 SM00062 Bacterial periplasmic substrate-binding proteins Daes_0365 SM00670 Large family of predicted nucleotide-binding domains Daes_0366 SM00852 Probable molybdopterin binding domain Daes_0373 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_0373 SM00091 PAS domain Daes_0373 SM00267 diguanylate cyclase Daes_0376 SM00382 ATPases associated with a variety of cellular activities Daes_0379 SM00342 helix_turn_helix, arabinose operon control protein Daes_0385 SM00062 Bacterial periplasmic substrate-binding proteins Daes_0390 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Daes_0392 SM00382 ATPases associated with a variety of cellular activities Daes_0399 SM00858 Daes_0399 Daes_0402 SM00487 DEAD-like helicases superfamily Daes_0402 SM00490 helicase superfamily c-terminal domain Daes_0412 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_0414 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_0463 SM00530 Helix-turn-helix XRE-family like proteins Daes_0482 SM00530 Helix-turn-helix XRE-family like proteins Daes_0499 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_0499 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0502 SM01192 Daes_0502 Daes_0502 SM01193 Daes_0502 Daes_0503 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Daes_0509 SM00450 Rhodanese Homology Domain Daes_0513 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_0515 SM00342 helix_turn_helix, arabinose operon control protein Daes_0516 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_0516 SM00091 PAS domain Daes_0516 SM00387 Histidine kinase-like ATPases Daes_0516 SM00388 His Kinase A (phosphoacceptor) domain Daes_0516 SM01079 Daes_0516 Daes_0522 SM00387 Histidine kinase-like ATPases Daes_0522 SM00388 His Kinase A (phosphoacceptor) domain Daes_0523 SM01126 Daes_0523 Daes_0524 SM00448 cheY-homologous receiver domain Daes_0526 SM00062 Bacterial periplasmic substrate-binding proteins Daes_0527 SM00062 Bacterial periplasmic substrate-binding proteins Daes_0530 SM00100 Cyclic nucleotide-monophosphate binding domain Daes_0530 SM00419 helix_turn_helix, cAMP Regulatory protein Daes_0534 SM00342 helix_turn_helix, arabinose operon control protein Daes_0534 SM00871 Bacterial transcription activator, effector binding domain Daes_0538 SM00382 ATPases associated with a variety of cellular activities Daes_0543 SM00530 Helix-turn-helix XRE-family like proteins Daes_0545 SM00530 Helix-turn-helix XRE-family like proteins Daes_0546 SM00028 Tetratricopeptide repeats Daes_0547 SM00382 ATPases associated with a variety of cellular activities Daes_0549 SM00382 ATPases associated with a variety of cellular activities Daes_0549 SM00448 cheY-homologous receiver domain Daes_0551 SM00091 PAS domain Daes_0551 SM00387 Histidine kinase-like ATPases Daes_0551 SM00388 His Kinase A (phosphoacceptor) domain Daes_0551 SM00448 cheY-homologous receiver domain Daes_0554 SM00981 Daes_0554 Daes_0559 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0559 SM00331 Sigma factor PP2C-like phosphatases Daes_0560 SM00382 ATPases associated with a variety of cellular activities Daes_0565 SM00342 helix_turn_helix, arabinose operon control protein Daes_0566 SM00382 ATPases associated with a variety of cellular activities Daes_0567 SM00382 ATPases associated with a variety of cellular activities Daes_0580 SM00382 ATPases associated with a variety of cellular activities Daes_0585 SM00382 ATPases associated with a variety of cellular activities Daes_0587 SM00342 helix_turn_helix, arabinose operon control protein Daes_0590 SM00347 helix_turn_helix multiple antibiotic resistance protein Daes_0593 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_0596 SM00876 Biotin and Thiamin Synthesis associated domain Daes_0598 SM00902 Iron hydrogenase small subunit Daes_0605 SM00382 ATPases associated with a variety of cellular activities Daes_0609 SM00267 diguanylate cyclase Daes_0614 SM00481 DNA polymerase alpha chain like domain Daes_0616 SM00387 Histidine kinase-like ATPases Daes_0616 SM00388 His Kinase A (phosphoacceptor) domain Daes_0616 SM00448 cheY-homologous receiver domain Daes_0619 SM00342 helix_turn_helix, arabinose operon control protein Daes_0625 SM00387 Histidine kinase-like ATPases Daes_0629 SM00912 haemagglutination activity domain Daes_0631 SM00421 helix_turn_helix, Lux Regulon Daes_0631 SM00448 cheY-homologous receiver domain Daes_0638 SM00382 ATPases associated with a variety of cellular activities Daes_0645 SM00062 Bacterial periplasmic substrate-binding proteins Daes_0646 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0646 SM00331 Sigma factor PP2C-like phosphatases Daes_0647 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_0647 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0648 SM00318 Staphylococcal nuclease homologues Daes_0649 SM00849 Metallo-beta-lactamase superfamily Daes_0653 SM00870 Daes_0653 Daes_0654 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_0655 SM00938 Nitrogen regulatory protein P-II Daes_0662 SM00387 Histidine kinase-like ATPases Daes_0666 SM00448 cheY-homologous receiver domain Daes_0666 SM00850 LytTr DNA-binding domain Daes_0674 SM00849 Metallo-beta-lactamase superfamily Daes_0678 SM00448 cheY-homologous receiver domain Daes_0678 SM00567 E-Z type HEAT repeats Daes_0684 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Daes_0684 SM00091 PAS domain Daes_0684 SM00387 Histidine kinase-like ATPases Daes_0703 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_0706 SM00342 helix_turn_helix, arabinose operon control protein Daes_0707 SM00382 ATPases associated with a variety of cellular activities Daes_0709 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_0724 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_0726 SM00382 ATPases associated with a variety of cellular activities Daes_0732 SM00052 Putative diguanylate phosphodiesterase Daes_0732 SM00091 PAS domain Daes_0732 SM00267 diguanylate cyclase Daes_0732 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0733 SM00028 Tetratricopeptide repeats Daes_0737 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_0761 SM00382 ATPases associated with a variety of cellular activities Daes_0761 SM00962 SRP54-type protein, GTPase domain Daes_0761 SM00963 SRP54-type protein, helical bundle domain Daes_0770 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_0770 SM00876 Biotin and Thiamin Synthesis associated domain Daes_0777 SM00382 ATPases associated with a variety of cellular activities Daes_0777 SM00448 cheY-homologous receiver domain Daes_0782 SM00448 cheY-homologous receiver domain Daes_0790 SM00100 Cyclic nucleotide-monophosphate binding domain Daes_0790 SM00419 helix_turn_helix, cAMP Regulatory protein Daes_0794 SM00957 SecA DEAD-like domain Daes_0794 SM00958 SecA preprotein cross-linking domain Daes_0799 SM00984 UDP binding domain Daes_0804 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_0804 SM00091 PAS domain Daes_0804 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_0804 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0809 SM00849 Metallo-beta-lactamase superfamily Daes_0816 SM00853 MutL C terminal dimerisation domain Daes_0816 SM01340 Daes_0816 Daes_0817 SM01005 Alanine racemase, C-terminal domain Daes_0819 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_0819 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0820 SM00387 Histidine kinase-like ATPases Daes_0820 SM00388 His Kinase A (phosphoacceptor) domain Daes_0823 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_0827 SM01060 Daes_0827 Daes_0829 SM00360 RNA recognition motif Daes_0833 SM00838 Elongation factor G C-terminus Daes_0841 SM00421 helix_turn_helix, Lux Regulon Daes_0842 SM00062 Bacterial periplasmic substrate-binding proteins Daes_0842 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Daes_0844 SM00382 ATPases associated with a variety of cellular activities Daes_0861 SM00881 CoA binding domain Daes_0869 SM00506 Appr-1"-p processing enzyme Daes_0871 SM00382 ATPases associated with a variety of cellular activities Daes_0871 SM01086 C-terminal, D2-small domain, of ClpB protein Daes_0874 SM00904 Riboflavin kinase Daes_0875 SM00028 Tetratricopeptide repeats Daes_0876 SM00357 Cold shock protein domain Daes_0876 SM00382 ATPases associated with a variety of cellular activities Daes_0876 SM00959 Rho termination factor, N-terminal domain Daes_0877 SM01058 CarD-like/TRCF domain Daes_0880 SM01400 Daes_0880 Daes_0882 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Daes_0884 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Daes_0884 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_0884 SM00091 PAS domain Daes_0884 SM00387 Histidine kinase-like ATPases Daes_0884 SM00388 His Kinase A (phosphoacceptor) domain Daes_0885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_0885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0885 SM01049 Daes_0885 Daes_0886 SM00450 Rhodanese Homology Domain Daes_0886 SM00867 YceI-like domain Daes_0888 SM00382 ATPases associated with a variety of cellular activities Daes_0896 SM00829 Enoylreductase Daes_0897 SM00382 ATPases associated with a variety of cellular activities Daes_0900 SM00091 PAS domain Daes_0903 SM00112 Cadherin repeats. Daes_0904 SM00387 Histidine kinase-like ATPases Daes_0911 SM00861 Transketolase, pyrimidine binding domain Daes_0914 SM00474 3'-5' exonuclease Daes_0922 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_0923 SM00052 Putative diguanylate phosphodiesterase Daes_0923 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_0923 SM00091 PAS domain Daes_0923 SM00267 diguanylate cyclase Daes_0923 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0923 SM01049 Daes_0923 Daes_0924 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_0925 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_0925 SM00091 PAS domain Daes_0925 SM00387 Histidine kinase-like ATPases Daes_0927 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_0927 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0929 SM00487 DEAD-like helicases superfamily Daes_0929 SM00490 helicase superfamily c-terminal domain Daes_0930 SM00316 Ribosomal protein S1-like RNA-binding domain Daes_0931 SM00360 RNA recognition motif Daes_0934 SM00028 Tetratricopeptide repeats Daes_0941 SM00116 Domain in cystathionine beta-synthase and other proteins. Daes_0942 SM00938 Nitrogen regulatory protein P-II Daes_0954 SM00830 Chorismate mutase type II Daes_0956 SM01133 Daes_0956 Daes_0958 SM00938 Nitrogen regulatory protein P-II Daes_0959 SM00052 Putative diguanylate phosphodiesterase Daes_0965 SM00062 Bacterial periplasmic substrate-binding proteins Daes_0969 SM00028 Tetratricopeptide repeats Daes_0969 SM00267 diguanylate cyclase Daes_0974 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_0974 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0975 SM00100 Cyclic nucleotide-monophosphate binding domain Daes_0980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_0980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_0985 SM00382 ATPases associated with a variety of cellular activities Daes_0986 SM00382 ATPases associated with a variety of cellular activities Daes_0987 SM00859 Semialdehyde dehydrogenase, NAD binding domain Daes_0996 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_1000 SM00448 cheY-homologous receiver domain Daes_1001 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_1001 SM00091 PAS domain Daes_1001 SM00387 Histidine kinase-like ATPases Daes_1001 SM00388 His Kinase A (phosphoacceptor) domain Daes_1001 SM00448 cheY-homologous receiver domain Daes_1002 SM00387 Histidine kinase-like ATPases Daes_1002 SM00388 His Kinase A (phosphoacceptor) domain Daes_1003 SM00382 ATPases associated with a variety of cellular activities Daes_1003 SM00448 cheY-homologous receiver domain Daes_1004 SM00091 PAS domain Daes_1004 SM00387 Histidine kinase-like ATPases Daes_1004 SM00388 His Kinase A (phosphoacceptor) domain Daes_1007 SM00448 cheY-homologous receiver domain Daes_1008 SM00448 cheY-homologous receiver domain Daes_1009 SM00448 cheY-homologous receiver domain Daes_1010 SM00387 Histidine kinase-like ATPases Daes_1010 SM00388 His Kinase A (phosphoacceptor) domain Daes_1011 SM00448 cheY-homologous receiver domain Daes_1022 SM00938 Nitrogen regulatory protein P-II Daes_1023 SM00938 Nitrogen regulatory protein P-II Daes_1030 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_1032 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Daes_1032 SM00382 ATPases associated with a variety of cellular activities Daes_1037 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_1037 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_1038 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_1040 SM00487 DEAD-like helicases superfamily Daes_1040 SM00490 helicase superfamily c-terminal domain Daes_1046 SM01207 Daes_1046 Daes_1047 SM00955 Daes_1047 Daes_1049 SM00798 AICARFT/IMPCHase bienzyme Daes_1050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_1050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_1050 SM01049 Daes_1050 Daes_1051 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_1053 SM00788 Adenylosuccinate synthetase Daes_1064 SM00387 Histidine kinase-like ATPases Daes_1064 SM00388 His Kinase A (phosphoacceptor) domain Daes_1064 SM00448 cheY-homologous receiver domain Daes_1065 SM00382 ATPases associated with a variety of cellular activities Daes_1065 SM00448 cheY-homologous receiver domain Daes_1066 SM00411 bacterial (prokaryotic) histone like domain Daes_1068 SM00890 Domain of unknown function Daes_1076 SM00091 PAS domain Daes_1076 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_1077 SM00886 Stress responsive A/B Barrel Domain Daes_1090 SM00100 Cyclic nucleotide-monophosphate binding domain Daes_1091 SM00448 cheY-homologous receiver domain Daes_1091 SM00862 Transcriptional regulatory protein, C terminal Daes_1094 SM00116 Domain in cystathionine beta-synthase and other proteins. Daes_1095 SM00448 cheY-homologous receiver domain Daes_1097 SM00382 ATPases associated with a variety of cellular activities Daes_1098 SM00831 Cation transporter/ATPase, N-terminus Daes_1099 SM00226 Low molecular weight phosphatase family Daes_1101 SM00448 cheY-homologous receiver domain Daes_1102 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Daes_1103 SM00382 ATPases associated with a variety of cellular activities Daes_1105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_1105 SM00387 Histidine kinase-like ATPases Daes_1105 SM00388 His Kinase A (phosphoacceptor) domain Daes_1108 SM00448 cheY-homologous receiver domain Daes_1108 SM00862 Transcriptional regulatory protein, C terminal Daes_1116 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_1116 SM00387 Histidine kinase-like ATPases Daes_1116 SM00388 His Kinase A (phosphoacceptor) domain Daes_1117 SM00448 cheY-homologous receiver domain Daes_1117 SM00862 Transcriptional regulatory protein, C terminal Daes_1122 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_1122 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_1127 SM00382 ATPases associated with a variety of cellular activities Daes_1133 SM00091 PAS domain Daes_1133 SM00387 Histidine kinase-like ATPases Daes_1133 SM00388 His Kinase A (phosphoacceptor) domain Daes_1133 SM00448 cheY-homologous receiver domain Daes_1134 SM00382 ATPases associated with a variety of cellular activities Daes_1134 SM00448 cheY-homologous receiver domain Daes_1135 SM00387 Histidine kinase-like ATPases Daes_1135 SM00448 cheY-homologous receiver domain Daes_1136 SM01230 Daes_1136 Daes_1141 SM00382 ATPases associated with a variety of cellular activities Daes_1142 SM00382 ATPases associated with a variety of cellular activities Daes_1144 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Daes_1159 SM00072 Guanylate kinase homologues. Daes_1162 SM00345 helix_turn_helix gluconate operon transcriptional repressor Daes_1162 SM00866 Daes_1162 Daes_1167 SM00382 ATPases associated with a variety of cellular activities Daes_1168 SM00382 ATPases associated with a variety of cellular activities Daes_1170 SM00382 ATPases associated with a variety of cellular activities Daes_1184 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Daes_1190 SM00091 PAS domain Daes_1190 SM00387 Histidine kinase-like ATPases Daes_1190 SM00388 His Kinase A (phosphoacceptor) domain Daes_1191 SM00448 cheY-homologous receiver domain Daes_1193 SM00195 Dual specificity phosphatase, catalytic domain Daes_1196 SM00849 Metallo-beta-lactamase superfamily Daes_1197 SM00448 cheY-homologous receiver domain Daes_1203 SM00899 Daes_1203 Daes_1204 SM00851 MGS-like domain Daes_1204 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Daes_1206 SM00116 Domain in cystathionine beta-synthase and other proteins. Daes_1218 SM00382 ATPases associated with a variety of cellular activities Daes_1220 SM00450 Rhodanese Homology Domain Daes_1233 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Daes_1233 SM00465 GIY-YIG type nucleases (URI domain) Daes_1234 SM00849 Metallo-beta-lactamase superfamily Daes_1240 SM00073 Histidine Phosphotransfer domain Daes_1241 SM00260 Two component signalling adaptor domain Daes_1241 SM00448 cheY-homologous receiver domain Daes_1242 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Daes_1244 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Daes_1247 SM00382 ATPases associated with a variety of cellular activities Daes_1255 SM00382 ATPases associated with a variety of cellular activities Daes_1262 SM00487 DEAD-like helicases superfamily Daes_1262 SM00490 helicase superfamily c-terminal domain Daes_1263 SM00935 Outer membrane protein (OmpH-like) Daes_1268 SM00876 Biotin and Thiamin Synthesis associated domain Daes_1281 SM00014 Acid phosphatase homologues Daes_1286 SM00267 diguanylate cyclase Daes_1286 SM00448 cheY-homologous receiver domain Daes_1310 SM00382 ATPases associated with a variety of cellular activities Daes_1313 SM00859 Semialdehyde dehydrogenase, NAD binding domain Daes_1316 SM00100 Cyclic nucleotide-monophosphate binding domain Daes_1321 SM00382 ATPases associated with a variety of cellular activities Daes_1327 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Daes_1328 SM01126 Daes_1328 Daes_1331 SM00091 PAS domain Daes_1331 SM00382 ATPases associated with a variety of cellular activities Daes_1337 SM00900 Daes_1337 Daes_1344 SM00028 Tetratricopeptide repeats Daes_1344 SM00448 cheY-homologous receiver domain Daes_1347 SM00448 cheY-homologous receiver domain Daes_1348 SM00978 Daes_1348 Daes_1350 SM00028 Tetratricopeptide repeats Daes_1354 SM00937 Daes_1354 Daes_1361 SM00448 cheY-homologous receiver domain Daes_1364 SM00962 SRP54-type protein, GTPase domain Daes_1371 SM01409 Daes_1371 Daes_1372 SM00271 DnaJ molecular chaperone homology domain Daes_1376 SM00271 DnaJ molecular chaperone homology domain Daes_1378 SM00881 CoA binding domain Daes_1384 SM00890 Domain of unknown function Daes_1388 SM00450 Rhodanese Homology Domain Daes_1388 SM00849 Metallo-beta-lactamase superfamily Daes_1392 SM00382 ATPases associated with a variety of cellular activities Daes_1398 SM00382 ATPases associated with a variety of cellular activities Daes_1400 SM00935 Outer membrane protein (OmpH-like) Daes_1410 SM00478 endonuclease III Daes_1415 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_1417 SM00481 DNA polymerase alpha chain like domain Daes_1433 SM00382 ATPases associated with a variety of cellular activities Daes_1434 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_1442 SM00382 ATPases associated with a variety of cellular activities Daes_1445 SM00382 ATPases associated with a variety of cellular activities Daes_1449 SM00382 ATPases associated with a variety of cellular activities Daes_1450 SM00052 Putative diguanylate phosphodiesterase Daes_1450 SM00267 diguanylate cyclase Daes_1452 SM00878 Biotin carboxylase C-terminal domain Daes_1454 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Daes_1454 SM01080 Daes_1454 Daes_1456 SM00382 ATPases associated with a variety of cellular activities Daes_1461 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_1461 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_1463 SM01126 Daes_1463 Daes_1466 SM01126 Daes_1466 Daes_1468 SM01211 Daes_1468 Daes_1474 SM00382 ATPases associated with a variety of cellular activities Daes_1482 SM01131 Daes_1482 Daes_1483 SM01130 Daes_1483 Daes_1485 SM00411 bacterial (prokaryotic) histone like domain Daes_1487 SM00267 diguanylate cyclase Daes_1488 SM00937 Daes_1488 Daes_1490 SM00116 Domain in cystathionine beta-synthase and other proteins. Daes_1490 SM01091 Transporter associated domain Daes_1491 SM01228 Daes_1491 Daes_1497 SM00650 Ribosomal RNA adenine dimethylases Daes_1498 SM00411 bacterial (prokaryotic) histone like domain Daes_1502 SM00463 Small MutS-related domain Daes_1502 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Daes_1502 SM00534 ATPase domain of DNA mismatch repair MUTS family Daes_1503 SM00400 zinc finger Daes_1503 SM00493 Daes_1503 Daes_1508 SM00562 Daes_1508 Daes_1509 SM00382 ATPases associated with a variety of cellular activities Daes_1514 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Daes_1514 SM00245 tail specific protease Daes_1516 SM00478 endonuclease III Daes_1529 SM01323 Daes_1529 Daes_1540 SM00382 ATPases associated with a variety of cellular activities Daes_1544 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Daes_1544 SM00534 ATPase domain of DNA mismatch repair MUTS family Daes_1549 SM00116 Domain in cystathionine beta-synthase and other proteins. Daes_1555 SM00947 Carbonic anhydrase Daes_1567 SM00363 S4 RNA-binding domain Daes_1569 SM00843 Daes_1569 Daes_1570 SM00841 Elongation factor P, C-terminal Daes_1570 SM01185 Daes_1570 Daes_1579 SM00857 Resolvase, N terminal domain Daes_1591 SM00891 ERCC4 domain Daes_1593 SM00400 zinc finger Daes_1605 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_1611 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_1657 SM00487 DEAD-like helicases superfamily Daes_1657 SM00490 helicase superfamily c-terminal domain Daes_1668 SM01126 Daes_1668 Daes_1669 SM00487 DEAD-like helicases superfamily Daes_1671 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_1671 SM00091 PAS domain Daes_1671 SM00387 Histidine kinase-like ATPases Daes_1671 SM00388 His Kinase A (phosphoacceptor) domain Daes_1671 SM00448 cheY-homologous receiver domain Daes_1680 SM00878 Biotin carboxylase C-terminal domain Daes_1684 SM00448 cheY-homologous receiver domain Daes_1686 SM00881 CoA binding domain Daes_1691 SM00382 ATPases associated with a variety of cellular activities Daes_1692 SM00463 Small MutS-related domain Daes_1693 SM00260 Two component signalling adaptor domain Daes_1702 SM00052 Putative diguanylate phosphodiesterase Daes_1702 SM00267 diguanylate cyclase Daes_1702 SM00448 cheY-homologous receiver domain Daes_1708 SM00028 Tetratricopeptide repeats Daes_1713 SM00930 Daes_1713 Daes_1716 SM00116 Domain in cystathionine beta-synthase and other proteins. Daes_1716 SM00924 MgtE intracellular N domain Daes_1726 SM00100 Cyclic nucleotide-monophosphate binding domain Daes_1726 SM00419 helix_turn_helix, cAMP Regulatory protein Daes_1731 SM00530 Helix-turn-helix XRE-family like proteins Daes_1734 SM00487 DEAD-like helicases superfamily Daes_1734 SM00490 helicase superfamily c-terminal domain Daes_1734 SM00982 Daes_1734 Daes_1734 SM01058 CarD-like/TRCF domain Daes_1735 SM00260 Two component signalling adaptor domain Daes_1737 SM00984 UDP binding domain Daes_1741 SM00116 Domain in cystathionine beta-synthase and other proteins. Daes_1744 SM00917 LeuA allosteric (dimerisation) domain Daes_1746 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Daes_1748 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_1752 SM00062 Bacterial periplasmic substrate-binding proteins Daes_1756 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Daes_1759 SM00382 ATPases associated with a variety of cellular activities Daes_1760 SM00382 ATPases associated with a variety of cellular activities Daes_1763 SM00382 ATPases associated with a variety of cellular activities Daes_1777 SM01152 Daes_1777 Daes_1790 SM00849 Metallo-beta-lactamase superfamily Daes_1790 SM01027 Beta-Casp domain Daes_1793 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_1801 SM00073 Histidine Phosphotransfer domain Daes_1804 SM00155 Phospholipase D. Active site motifs. Daes_1805 SM01126 Daes_1805 Daes_1807 SM00292 breast cancer carboxy-terminal domain Daes_1807 SM00532 Ligase N family Daes_1808 SM00487 DEAD-like helicases superfamily Daes_1808 SM00490 helicase superfamily c-terminal domain Daes_1811 SM00382 ATPases associated with a variety of cellular activities Daes_1811 SM01086 C-terminal, D2-small domain, of ClpB protein Daes_1813 SM01118 Daes_1813 Daes_1816 SM00448 cheY-homologous receiver domain Daes_1817 SM00073 Histidine Phosphotransfer domain Daes_1817 SM00260 Two component signalling adaptor domain Daes_1817 SM00387 Histidine kinase-like ATPases Daes_1817 SM01231 Daes_1817 Daes_1818 SM00091 PAS domain Daes_1818 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_1820 SM00838 Elongation factor G C-terminus Daes_1820 SM00889 Elongation factor G, domain IV Daes_1835 SM00116 Domain in cystathionine beta-synthase and other proteins. Daes_1838 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Daes_1840 SM00382 ATPases associated with a variety of cellular activities Daes_1840 SM00464 Found in ATP-dependent protease La (LON) Daes_1841 SM00382 ATPases associated with a variety of cellular activities Daes_1841 SM00994 ClpX C4-type zinc finger Daes_1841 SM01086 C-terminal, D2-small domain, of ClpB protein Daes_1851 SM00382 ATPases associated with a variety of cellular activities Daes_1851 SM00962 SRP54-type protein, GTPase domain Daes_1851 SM00963 SRP54-type protein, helical bundle domain Daes_1852 SM00316 Ribosomal protein S1-like RNA-binding domain Daes_1862 SM00267 diguanylate cyclase Daes_1866 SM00028 Tetratricopeptide repeats Daes_1871 SM00073 Histidine Phosphotransfer domain Daes_1871 SM00260 Two component signalling adaptor domain Daes_1871 SM00387 Histidine kinase-like ATPases Daes_1871 SM01231 Daes_1871 Daes_1872 SM00448 cheY-homologous receiver domain Daes_1873 SM00138 Methyltransferase, chemotaxis proteins Daes_1874 SM00567 E-Z type HEAT repeats Daes_1875 SM00448 cheY-homologous receiver domain Daes_1890 SM00899 Daes_1890 Daes_1891 SM00899 Daes_1891 Daes_1897 SM00382 ATPases associated with a variety of cellular activities Daes_1900 SM00331 Sigma factor PP2C-like phosphatases Daes_1901 SM00091 PAS domain Daes_1901 SM00267 diguanylate cyclase Daes_1904 SM00382 ATPases associated with a variety of cellular activities Daes_1905 SM00062 Bacterial periplasmic substrate-binding proteins Daes_1909 SM01329 Daes_1909 Daes_1912 SM00917 LeuA allosteric (dimerisation) domain Daes_1920 SM00478 endonuclease III Daes_1920 SM00525 Daes_1920 Daes_1921 SM00855 Phosphoglycerate mutase family Daes_1928 SM00852 Probable molybdopterin binding domain Daes_1949 SM00834 Putative regulatory protein Daes_1951 SM01078 Daes_1951 Daes_1959 SM00925 MltA specific insert domain Daes_1961 SM00062 Bacterial periplasmic substrate-binding proteins Daes_1963 SM00382 ATPases associated with a variety of cellular activities Daes_1970 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_1972 SM00861 Transketolase, pyrimidine binding domain Daes_1985 SM00858 Daes_1985 Daes_1996 SM00387 Histidine kinase-like ATPases Daes_1996 SM00388 His Kinase A (phosphoacceptor) domain Daes_1997 SM00448 cheY-homologous receiver domain Daes_1998 SM00387 Histidine kinase-like ATPases Daes_1998 SM00388 His Kinase A (phosphoacceptor) domain Daes_2004 SM00899 Daes_2004 Daes_2007 SM00851 MGS-like domain Daes_2008 SM00028 Tetratricopeptide repeats Daes_2015 SM00382 ATPases associated with a variety of cellular activities Daes_2016 SM00226 Low molecular weight phosphatase family Daes_2018 SM00422 helix_turn_helix, mercury resistance Daes_2019 SM00873 B3/4 domain Daes_2019 SM00874 tRNA synthetase B5 domain Daes_2019 SM00896 Ferredoxin-fold anticodon binding domain Daes_2024 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Daes_2027 SM00028 Tetratricopeptide repeats Daes_2032 SM00852 Probable molybdopterin binding domain Daes_2034 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_2038 SM01133 Daes_2038 Daes_2049 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_2054 SM00382 ATPases associated with a variety of cellular activities Daes_2055 SM00382 ATPases associated with a variety of cellular activities Daes_2059 SM00448 cheY-homologous receiver domain Daes_2060 SM00450 Rhodanese Homology Domain Daes_2072 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_2072 SM00954 Region found in RelA / SpoT proteins Daes_2074 SM00487 DEAD-like helicases superfamily Daes_2074 SM00490 helicase superfamily c-terminal domain Daes_2081 SM00878 Biotin carboxylase C-terminal domain Daes_2092 SM01133 Daes_2092 Daes_2095 SM00062 Bacterial periplasmic substrate-binding proteins Daes_2096 SM00382 ATPases associated with a variety of cellular activities Daes_2104 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Daes_2112 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_2114 SM00248 ankyrin repeats Daes_2118 SM00487 DEAD-like helicases superfamily Daes_2118 SM00490 helicase superfamily c-terminal domain Daes_2122 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_2122 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_2124 SM00845 GatB domain Daes_2126 SM00925 MltA specific insert domain Daes_2143 SM00316 Ribosomal protein S1-like RNA-binding domain Daes_2150 SM01387 Daes_2150 Daes_2151 SM00316 Ribosomal protein S1-like RNA-binding domain Daes_2151 SM00322 K homology RNA-binding domain Daes_2153 SM00028 Tetratricopeptide repeats Daes_2154 SM00382 ATPases associated with a variety of cellular activities Daes_2173 SM00849 Metallo-beta-lactamase superfamily Daes_2174 SM00563 Phosphate acyltransferases Daes_2175 SM00838 Elongation factor G C-terminus Daes_2175 SM00889 Elongation factor G, domain IV Daes_2187 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Daes_2189 SM00760 Bacterial dnaA protein helix-turn-helix domain Daes_2204 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_2205 SM01004 Delta-aminolevulinic acid dehydratase Daes_2206 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_2207 SM00344 helix_turn_helix ASNC type Daes_2210 SM00382 ATPases associated with a variety of cellular activities Daes_2213 SM00344 helix_turn_helix ASNC type Daes_2215 SM00382 ATPases associated with a variety of cellular activities Daes_2223 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_2228 SM00662 RNA polymerases D Daes_2229 SM00363 S4 RNA-binding domain Daes_2229 SM01390 Daes_2229 Daes_2243 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Daes_2244 SM01374 Daes_2244 Daes_2248 SM00322 K homology RNA-binding domain Daes_2251 SM01382 Daes_2251 Daes_2251 SM01383 Daes_2251 Daes_2255 SM01403 Daes_2255 Daes_2256 SM00838 Elongation factor G C-terminus Daes_2256 SM00889 Elongation factor G, domain IV Daes_2259 SM00663 RNA polymerase I subunit A N-terminus Daes_2264 SM00649 Ribosomal protein L11/L12 Daes_2265 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Daes_2265 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Daes_2270 SM00260 Two component signalling adaptor domain Daes_2270 SM00448 cheY-homologous receiver domain Daes_2279 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Daes_2280 SM00028 Tetratricopeptide repeats Daes_2288 SM00448 cheY-homologous receiver domain Daes_2289 SM00073 Histidine Phosphotransfer domain Daes_2290 SM00260 Two component signalling adaptor domain Daes_2290 SM00387 Histidine kinase-like ATPases Daes_2290 SM01231 Daes_2290 Daes_2293 SM00382 ATPases associated with a variety of cellular activities Daes_2298 SM00347 helix_turn_helix multiple antibiotic resistance protein Daes_2303 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_2304 SM00100 Cyclic nucleotide-monophosphate binding domain Daes_2304 SM00419 helix_turn_helix, cAMP Regulatory protein Daes_2312 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Daes_2313 SM00072 Guanylate kinase homologues. Daes_2317 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_2318 SM00028 Tetratricopeptide repeats Daes_2328 SM00028 Tetratricopeptide repeats Daes_2328 SM00671 Sel1-like repeats. Daes_2332 SM00382 ATPases associated with a variety of cellular activities Daes_2332 SM01086 C-terminal, D2-small domain, of ClpB protein Daes_2334 SM00271 DnaJ molecular chaperone homology domain Daes_2347 SM00014 Acid phosphatase homologues Daes_2355 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Daes_2355 SM00382 ATPases associated with a variety of cellular activities Daes_2361 SM00357 Cold shock protein domain Daes_2362 SM00382 ATPases associated with a variety of cellular activities Daes_2369 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_2369 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_2431 SM00411 bacterial (prokaryotic) histone like domain Daes_2438 SM00091 PAS domain Daes_2438 SM00387 Histidine kinase-like ATPases Daes_2438 SM00388 His Kinase A (phosphoacceptor) domain Daes_2440 SM00732 Likely ribonuclease with RNase H fold. Daes_2446 SM00448 cheY-homologous receiver domain Daes_2451 SM01126 Daes_2451 Daes_2457 SM00116 Domain in cystathionine beta-synthase and other proteins. Daes_2457 SM01240 Daes_2457 Daes_2458 SM00382 ATPases associated with a variety of cellular activities Daes_2459 SM00382 ATPases associated with a variety of cellular activities Daes_2463 SM00028 Tetratricopeptide repeats Daes_2467 SM00382 ATPases associated with a variety of cellular activities Daes_2485 SM00347 helix_turn_helix multiple antibiotic resistance protein Daes_2491 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Daes_2491 SM00475 5'-3' exonuclease Daes_2491 SM00482 DNA polymerase A domain Daes_2494 SM00345 helix_turn_helix gluconate operon transcriptional repressor Daes_2494 SM00895 Daes_2494 Daes_2508 SM00998 Adenylosuccinate lyase C-terminus Daes_2509 SM00834 Putative regulatory protein Daes_2515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_2515 SM00387 Histidine kinase-like ATPases Daes_2515 SM00388 His Kinase A (phosphoacceptor) domain Daes_2516 SM00382 ATPases associated with a variety of cellular activities Daes_2516 SM00448 cheY-homologous receiver domain Daes_2517 SM00260 Two component signalling adaptor domain Daes_2517 SM00448 cheY-homologous receiver domain Daes_2519 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Daes_2519 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_2520 SM00448 cheY-homologous receiver domain Daes_2521 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_2521 SM00387 Histidine kinase-like ATPases Daes_2521 SM00388 His Kinase A (phosphoacceptor) domain Daes_2521 SM00448 cheY-homologous receiver domain Daes_2523 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_2523 SM00387 Histidine kinase-like ATPases Daes_2523 SM00388 His Kinase A (phosphoacceptor) domain Daes_2523 SM00448 cheY-homologous receiver domain Daes_2548 SM00382 ATPases associated with a variety of cellular activities Daes_2549 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Daes_2554 SM00861 Transketolase, pyrimidine binding domain Daes_2563 SM00912 haemagglutination activity domain Daes_2565 SM01126 Daes_2565 Daes_2566 SM00869 Autotransporter beta-domain Daes_2572 SM00393 Putative single-stranded nucleic acids-binding domain Daes_2572 SM01245 Daes_2572 Daes_2574 SM01234 Daes_2574 Daes_2579 SM00100 Cyclic nucleotide-monophosphate binding domain Daes_2590 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_2599 SM00563 Phosphate acyltransferases Daes_2601 SM00883 Chaperonin 10 Kd subunit Daes_2604 SM00028 Tetratricopeptide repeats Daes_2605 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Daes_2606 SM01007 Class II Aldolase and Adducin N-terminal domain Daes_2607 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Daes_2616 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Daes_2617 SM00382 ATPases associated with a variety of cellular activities Daes_2620 SM00849 Metallo-beta-lactamase superfamily Daes_2621 SM00382 ATPases associated with a variety of cellular activities Daes_2629 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_2629 SM00091 PAS domain Daes_2629 SM00267 diguanylate cyclase Daes_2634 SM00091 PAS domain Daes_2634 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_2634 SM00387 Histidine kinase-like ATPases Daes_2634 SM00388 His Kinase A (phosphoacceptor) domain Daes_2635 SM00387 Histidine kinase-like ATPases Daes_2635 SM00448 cheY-homologous receiver domain Daes_2636 SM00387 Histidine kinase-like ATPases Daes_2636 SM00448 cheY-homologous receiver domain Daes_2637 SM00448 cheY-homologous receiver domain Daes_2638 SM00448 cheY-homologous receiver domain Daes_2646 SM00091 PAS domain Daes_2646 SM00382 ATPases associated with a variety of cellular activities Daes_2649 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_2649 SM00091 PAS domain Daes_2649 SM00382 ATPases associated with a variety of cellular activities Daes_2649 SM00448 cheY-homologous receiver domain Daes_2651 SM00448 cheY-homologous receiver domain Daes_2655 SM00062 Bacterial periplasmic substrate-binding proteins Daes_2655 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_2655 SM00091 PAS domain Daes_2655 SM00387 Histidine kinase-like ATPases Daes_2655 SM00388 His Kinase A (phosphoacceptor) domain Daes_2655 SM00448 cheY-homologous receiver domain Daes_2658 SM00345 helix_turn_helix gluconate operon transcriptional repressor Daes_2660 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Daes_2664 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_2664 SM00091 PAS domain Daes_2664 SM00387 Histidine kinase-like ATPases Daes_2664 SM00388 His Kinase A (phosphoacceptor) domain Daes_2664 SM00448 cheY-homologous receiver domain Daes_2665 SM00387 Histidine kinase-like ATPases Daes_2665 SM00388 His Kinase A (phosphoacceptor) domain Daes_2665 SM00448 cheY-homologous receiver domain Daes_2666 SM00893 Electron transfer flavoprotein domain Daes_2672 SM00382 ATPases associated with a variety of cellular activities Daes_2678 SM01329 Daes_2678 Daes_2680 SM01230 Daes_2680 Daes_2685 SM00382 ATPases associated with a variety of cellular activities Daes_2692 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_2692 SM00091 PAS domain Daes_2692 SM00267 diguanylate cyclase Daes_2692 SM01079 Daes_2692 Daes_2694 SM00448 cheY-homologous receiver domain Daes_2695 SM00448 cheY-homologous receiver domain Daes_2695 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_2696 SM00387 Histidine kinase-like ATPases Daes_2697 SM00448 cheY-homologous receiver domain Daes_2698 SM00382 ATPases associated with a variety of cellular activities Daes_2710 SM00382 ATPases associated with a variety of cellular activities Daes_2718 SM00855 Phosphoglycerate mutase family Daes_2723 SM00267 diguanylate cyclase Daes_2723 SM00448 cheY-homologous receiver domain Daes_2726 SM00316 Ribosomal protein S1-like RNA-binding domain Daes_2726 SM00357 Cold shock protein domain Daes_2726 SM00955 Daes_2726 Daes_2729 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Daes_2729 SM00387 Histidine kinase-like ATPases Daes_2734 SM00382 ATPases associated with a variety of cellular activities Daes_2735 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Daes_2738 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_2745 SM00360 RNA recognition motif Daes_2750 SM00091 PAS domain Daes_2750 SM00382 ATPases associated with a variety of cellular activities Daes_2753 SM00387 Histidine kinase-like ATPases Daes_2753 SM00388 His Kinase A (phosphoacceptor) domain Daes_2766 SM00530 Helix-turn-helix XRE-family like proteins Daes_2768 SM00116 Domain in cystathionine beta-synthase and other proteins. Daes_2784 SM00842 Cell division protein FtsA Daes_2785 SM00864 Tubulin/FtsZ family, GTPase domain Daes_2785 SM00865 Tubulin/FtsZ family, C-terminal domain Daes_2786 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_2794 SM00825 Beta-ketoacyl synthase Daes_2796 SM00822 Daes_2796 Daes_2804 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Daes_2808 SM00849 Metallo-beta-lactamase superfamily Daes_2809 SM00382 ATPases associated with a variety of cellular activities Daes_2809 SM00448 cheY-homologous receiver domain Daes_2810 SM00387 Histidine kinase-like ATPases Daes_2810 SM00388 His Kinase A (phosphoacceptor) domain Daes_2823 SM00869 Autotransporter beta-domain Daes_2829 SM00382 ATPases associated with a variety of cellular activities Daes_2829 SM00464 Found in ATP-dependent protease La (LON) Daes_2830 SM00028 Tetratricopeptide repeats Daes_2833 SM00028 Tetratricopeptide repeats Daes_2834 SM00834 Putative regulatory protein Daes_2847 SM00382 ATPases associated with a variety of cellular activities Daes_2853 SM00382 ATPases associated with a variety of cellular activities Daes_2854 SM00116 Domain in cystathionine beta-synthase and other proteins. Daes_2862 SM00062 Bacterial periplasmic substrate-binding proteins Daes_2864 SM00062 Bacterial periplasmic substrate-binding proteins Daes_2867 SM00028 Tetratricopeptide repeats Daes_2872 SM00849 Metallo-beta-lactamase superfamily Daes_2878 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Daes_2884 SM00852 Probable molybdopterin binding domain Daes_2886 SM00996 S-adenosyl-L-homocysteine hydrolase Daes_2886 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Daes_2887 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Daes_2889 SM00448 cheY-homologous receiver domain Daes_2891 SM00450 Rhodanese Homology Domain Daes_2894 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_2894 SM00091 PAS domain Daes_2894 SM00387 Histidine kinase-like ATPases Daes_2894 SM00388 His Kinase A (phosphoacceptor) domain Daes_2903 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Daes_2903 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Daes_2904 SM00344 helix_turn_helix ASNC type Daes_2906 SM00387 Histidine kinase-like ATPases Daes_2906 SM00388 His Kinase A (phosphoacceptor) domain Daes_2906 SM00448 cheY-homologous receiver domain Daes_2907 SM00028 Tetratricopeptide repeats Daes_2914 SM00858 Daes_2914 Daes_2917 SM00382 ATPases associated with a variety of cellular activities Daes_2917 SM00448 cheY-homologous receiver domain Daes_2919 SM00327 von Willebrand factor (vWF) type A domain Daes_2921 SM00028 Tetratricopeptide repeats Daes_2922 SM00062 Bacterial periplasmic substrate-binding proteins Daes_2930 SM01126 Daes_2930 Daes_2947 SM00883 Chaperonin 10 Kd subunit Daes_2950 SM00091 PAS domain Daes_2950 SM00267 diguanylate cyclase Daes_2952 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_2952 SM00387 Histidine kinase-like ATPases Daes_2952 SM00388 His Kinase A (phosphoacceptor) domain Daes_2952 SM00448 cheY-homologous receiver domain Daes_2954 SM00450 Rhodanese Homology Domain Daes_2956 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_2956 SM00331 Sigma factor PP2C-like phosphatases Daes_2966 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_2966 SM01049 Daes_2966 Daes_2967 SM00710 Parallel beta-helix repeats Daes_2969 SM00260 Two component signalling adaptor domain Daes_2969 SM00448 cheY-homologous receiver domain Daes_2970 SM00858 Daes_2970 Daes_2976 SM00382 ATPases associated with a variety of cellular activities Daes_2977 SM00382 ATPases associated with a variety of cellular activities Daes_2989 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_2989 SM00387 Histidine kinase-like ATPases Daes_2989 SM00388 His Kinase A (phosphoacceptor) domain Daes_2990 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_2995 SM00919 Malic enzyme, NAD binding domain Daes_2995 SM01274 Daes_2995 Daes_3007 SM01049 Daes_3007 Daes_3008 SM01049 Daes_3008 Daes_3011 SM00479 Daes_3011 Daes_3021 SM00382 ATPases associated with a variety of cellular activities Daes_3025 SM00382 ATPases associated with a variety of cellular activities Daes_3028 SM00382 ATPases associated with a variety of cellular activities Daes_3036 SM00830 Chorismate mutase type II Daes_3046 SM00358 Double-stranded RNA binding motif Daes_3046 SM00535 Ribonuclease III family Daes_3047 SM00881 CoA binding domain Daes_3053 SM00316 Ribosomal protein S1-like RNA-binding domain Daes_3055 SM00382 ATPases associated with a variety of cellular activities Daes_3068 SM00382 ATPases associated with a variety of cellular activities Daes_3069 SM00448 cheY-homologous receiver domain Daes_3069 SM00862 Transcriptional regulatory protein, C terminal Daes_3078 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_3078 SM00091 PAS domain Daes_3078 SM00387 Histidine kinase-like ATPases Daes_3078 SM00388 His Kinase A (phosphoacceptor) domain Daes_3078 SM00448 cheY-homologous receiver domain Daes_3085 SM00028 Tetratricopeptide repeats Daes_3086 SM00028 Tetratricopeptide repeats Daes_3089 SM00450 Rhodanese Homology Domain Daes_3098 SM00062 Bacterial periplasmic substrate-binding proteins Daes_3098 SM00091 PAS domain Daes_3098 SM00387 Histidine kinase-like ATPases Daes_3098 SM00388 His Kinase A (phosphoacceptor) domain Daes_3103 SM00138 Methyltransferase, chemotaxis proteins Daes_3104 SM00322 K homology RNA-binding domain Daes_3104 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_3109 SM00382 ATPases associated with a variety of cellular activities Daes_3121 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_3123 SM00881 CoA binding domain Daes_3132 SM01018 B12 binding domain Daes_3134 SM00028 Tetratricopeptide repeats Daes_3138 SM00861 Transketolase, pyrimidine binding domain Daes_3149 SM00487 DEAD-like helicases superfamily Daes_3149 SM00490 helicase superfamily c-terminal domain Daes_3150 SM00448 cheY-homologous receiver domain Daes_3150 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Daes_3154 SM00382 ATPases associated with a variety of cellular activities Daes_3154 SM00448 cheY-homologous receiver domain Daes_3157 SM00849 Metallo-beta-lactamase superfamily Daes_3158 SM00387 Histidine kinase-like ATPases Daes_3158 SM00388 His Kinase A (phosphoacceptor) domain Daes_3160 SM00729 Elongator protein 3, MiaB family, Radical SAM Daes_3162 SM00411 bacterial (prokaryotic) histone like domain Daes_3167 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Daes_3172 SM00382 ATPases associated with a variety of cellular activities Daes_3174 SM00646 Daes_3174 Daes_3179 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Daes_3182 SM00450 Rhodanese Homology Domain Daes_3187 SM00382 ATPases associated with a variety of cellular activities Daes_3193 SM00481 DNA polymerase alpha chain like domain Daes_3200 SM00421 helix_turn_helix, Lux Regulon Daes_3200 SM00448 cheY-homologous receiver domain Daes_3201 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_3201 SM00091 PAS domain Daes_3201 SM00387 Histidine kinase-like ATPases Daes_3203 SM00116 Domain in cystathionine beta-synthase and other proteins. Daes_3204 SM00448 cheY-homologous receiver domain Daes_3206 SM01126 Daes_3206 Daes_3211 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Daes_3223 SM01126 Daes_3223 Daes_3225 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Daes_3225 SM00091 PAS domain Daes_3225 SM00331 Sigma factor PP2C-like phosphatases Daes_3231 SM00028 Tetratricopeptide repeats Daes_3232 SM00028 Tetratricopeptide repeats Daes_3234 SM00382 ATPases associated with a variety of cellular activities Daes_3247 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Daes_3249 SM01092 CO dehydrogenase flavoprotein C-terminal domain Daes_3262 SM01359 Daes_3262 Daes_3262 SM01360 Daes_3262 Daes_3264 SM00267 diguanylate cyclase Daes_3267 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Daes_3283 SM01264 Daes_3283 Daes_3284 SM01230 Daes_3284 Daes_3289 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Daes_3289 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Daes_3292 SM00518 AP endonuclease family 2 Daes_3294 SM00360 RNA recognition motif Daes_3296 SM01126 Daes_3296 Daes_3299 SM00382 ATPases associated with a variety of cellular activities Daes_3314 SM00855 Phosphoglycerate mutase family Daes_3316 SM00387 Histidine kinase-like ATPases Daes_3316 SM00388 His Kinase A (phosphoacceptor) domain Daes_3317 SM00028 Tetratricopeptide repeats Daes_3318 SM00434 DNA Topoisomerase IV Daes_3319 SM00387 Histidine kinase-like ATPases Daes_3319 SM00433 TopoisomeraseII Daes_3320 SM00480 DNA polymerase III beta subunit Daes_3321 SM00382 ATPases associated with a variety of cellular activities Daes_3321 SM00760 Bacterial dnaA protein helix-turn-helix domain Daes_3326 SM01001 AIR carboxylase Daes_3327 SM01209 Daes_3327 Daes_3327 SM01210 Daes_3327 Daes_3331 SM01126 Daes_3331 Daes_3344 SM00244 prohibitin homologues