locus-tag class description EJA96_00030 PF14659 Phage integrase, N-terminal SAM-like domain EJA96_00030 PF00589 Phage integrase family EJA96_00055 PF00171 Aldehyde dehydrogenase family EJA96_00065 PF00202 Aminotransferase class-III EJA96_00075 PF00072 Response regulator receiver domain EJA96_00080 PF00392 Bacterial regulatory proteins, gntR family EJA96_00080 PF00155 Aminotransferase class I and II EJA96_00085 PF02627 Carboxymuconolactone decarboxylase family EJA96_00100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_00100 PF03466 LysR substrate binding domain EJA96_00125 PF01435 Peptidase family M48 EJA96_00140 PF00005 ABC transporter EJA96_00140 PF12857 TOBE-like domain EJA96_00145 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_00150 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_00165 PF00990 Diguanylate cyclase, GGDEF domain EJA96_00165 PF00563 EAL domain EJA96_00165 PF03707 Bacterial signalling protein N terminal repeat EJA96_00175 PF00474 Sodium:solute symporter family EJA96_00180 PF00491 Arginase family EJA96_00185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_00185 PF03466 LysR substrate binding domain EJA96_00190 PF17158 Membrane-associated sensor, integral membrane domain EJA96_00190 PF00990 Diguanylate cyclase, GGDEF domain EJA96_00195 PF03573 outer membrane porin, OprD family EJA96_00215 PF13416 Bacterial extracellular solute-binding protein EJA96_00220 PF00120 Glutamine synthetase, catalytic domain EJA96_00225 PF07722 Peptidase C26 EJA96_00230 PF00120 Glutamine synthetase, catalytic domain EJA96_00235 PF00202 Aminotransferase class-III EJA96_00240 PF13416 Bacterial extracellular solute-binding protein EJA96_00245 PF13416 Bacterial extracellular solute-binding protein EJA96_00250 PF00005 ABC transporter EJA96_00250 PF08402 TOBE domain EJA96_00255 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_00260 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_00265 PF01804 Penicillin amidase EJA96_00320 PF00497 Bacterial extracellular solute-binding proteins, family 3 EJA96_00330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EJA96_00330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EJA96_00335 PF02913 FAD linked oxidases, C-terminal domain EJA96_00335 PF01565 FAD binding domain EJA96_00340 PF01557 Fumarylacetoacetate (FAA) hydrolase family EJA96_00350 PF04076 Bacterial OB fold (BOF) protein EJA96_00355 PF00850 Histone deacetylase domain EJA96_00360 PF00324 Amino acid permease EJA96_00365 PF01547 Bacterial extracellular solute-binding protein EJA96_00370 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_00375 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_00390 PF06977 SdiA-regulated EJA96_00395 PF04389 Peptidase family M28 EJA96_00400 PF00132 Bacterial transferase hexapeptide (six repeats) EJA96_00405 PF07411 Domain of unknown function (DUF1508) EJA96_00410 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EJA96_00415 PF00291 Pyridoxal-phosphate dependent enzyme EJA96_00415 PF00585 C-terminal regulatory domain of Threonine dehydratase EJA96_00450 PF00293 NUDIX domain EJA96_00455 PF01590 GAF domain EJA96_00455 PF00391 PEP-utilising enzyme, mobile domain EJA96_00455 PF02896 PEP-utilising enzyme, TIM barrel domain EJA96_00455 PF05524 PEP-utilising enzyme, N-terminal EJA96_00460 PF08448 PAS fold EJA96_00460 PF00990 Diguanylate cyclase, GGDEF domain EJA96_00470 PF01925 Sulfite exporter TauE/SafE EJA96_00475 PF01790 Prolipoprotein diacylglyceryl transferase EJA96_00480 PF00303 Thymidylate synthase EJA96_00505 PF03009 Glycerophosphoryl diester phosphodiesterase family EJA96_00520 PF00186 Dihydrofolate reductase EJA96_00525 PF12850 Calcineurin-like phosphoesterase superfamily domain EJA96_00530 PF00860 Permease family EJA96_00535 PF00920 Dehydratase family EJA96_00540 PF10672 S-adenosylmethionine-dependent methyltransferase EJA96_00540 PF17785 PUA-like domain EJA96_00545 PF01965 DJ-1/PfpI family EJA96_00555 PF06827 Zinc finger found in FPG and IleRS EJA96_00555 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EJA96_00555 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EJA96_00585 PF00037 4Fe-4S binding domain EJA96_00590 PF01467 Cytidylyltransferase-like EJA96_00595 PF00732 GMC oxidoreductase EJA96_00595 PF05199 GMC oxidoreductase EJA96_00605 PF00171 Aldehyde dehydrogenase family EJA96_00610 PF00440 Bacterial regulatory proteins, tetR family EJA96_00635 PF05193 Peptidase M16 inactive domain EJA96_00640 PF05193 Peptidase M16 inactive domain EJA96_00640 PF00675 Insulinase (Peptidase family M16) EJA96_00645 PF00448 SRP54-type protein, GTPase domain EJA96_00645 PF02881 SRP54-type protein, helical bundle domain EJA96_00650 PF00005 ABC transporter EJA96_00655 PF18075 FtsX extracellular domain EJA96_00660 PF04542 Sigma-70 region 2 EJA96_00660 PF04545 Sigma-70, region 4 EJA96_00660 PF00140 Sigma-70 factor, region 1.2 EJA96_00670 PF00912 Transglycosylase EJA96_00675 PF04241 Protein of unknown function (DUF423) EJA96_00680 PF05690 Thiazole biosynthesis protein ThiG EJA96_00680 PF02597 ThiS family EJA96_00685 PF05690 Thiazole biosynthesis protein ThiG EJA96_00690 PF02390 Putative methyltransferase EJA96_00695 PF07044 Protein of unknown function (DUF1329) EJA96_00710 PF04055 Radical SAM superfamily EJA96_00710 PF06969 HemN C-terminal domain EJA96_00715 PF01725 Ham1 family EJA96_00725 PF00561 alpha/beta hydrolase fold EJA96_00725 PF07021 Methionine biosynthesis protein MetW EJA96_00730 PF00561 alpha/beta hydrolase fold EJA96_00735 PF01926 50S ribosome-binding GTPase EJA96_00735 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EJA96_00740 PF02594 Uncharacterised ACR, YggU family COG1872 EJA96_00745 PF02325 YGGT family EJA96_00750 PF14748 Pyrroline-5-carboxylate reductase dimerisation EJA96_00750 PF03807 NADP oxidoreductase coenzyme F420-dependent EJA96_00755 PF01168 Alanine racemase, N-terminal domain EJA96_00760 PF00437 Type II/IV secretion system protein EJA96_00765 PF00437 Type II/IV secretion system protein EJA96_00770 PF01545 Cation efflux family EJA96_00780 PF00571 CBS domain EJA96_00780 PF00291 Pyridoxal-phosphate dependent enzyme EJA96_00785 PF01053 Cys/Met metabolism PLP-dependent enzyme EJA96_00790 PF01979 Amidohydrolase family EJA96_00795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EJA96_00795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EJA96_00800 PF00156 Phosphoribosyl transferase domain EJA96_00805 PF03652 Holliday junction resolvase EJA96_00810 PF02622 Uncharacterized ACR, COG1678 EJA96_00820 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EJA96_00820 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EJA96_00825 PF00072 Response regulator receiver domain EJA96_00830 PF00072 Response regulator receiver domain EJA96_00835 PF01584 CheW-like domain EJA96_00840 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term EJA96_00840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_00845 PF01739 CheR methyltransferase, SAM binding domain EJA96_00845 PF03705 CheR methyltransferase, all-alpha domain EJA96_00855 PF01339 CheB methylesterase EJA96_00870 PF01810 LysE type translocator EJA96_00880 PF04452 RNA methyltransferase EJA96_00885 PF00202 Aminotransferase class-III EJA96_00900 PF01292 Prokaryotic cytochrome b561 EJA96_00905 PF04264 YceI-like domain EJA96_00910 PF01047 MarR family EJA96_00915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EJA96_00915 PF00529 HlyD membrane-fusion protein of T1SS EJA96_00920 PF00873 AcrB/AcrD/AcrF family EJA96_00925 PF08139 Prokaryotic membrane lipoprotein lipid attachment site EJA96_00925 PF02321 Outer membrane efflux protein EJA96_00940 PF02219 Methylenetetrahydrofolate reductase EJA96_00945 PF13291 ACT domain EJA96_00945 PF04607 Region found in RelA / SpoT proteins EJA96_00945 PF02824 TGS domain EJA96_00950 PF05221 S-adenosyl-L-homocysteine hydrolase EJA96_00950 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain EJA96_00960 PF07660 Secretin and TonB N terminus short domain EJA96_00960 PF00593 TonB dependent receptor EJA96_00960 PF07715 TonB-dependent Receptor Plug Domain EJA96_00970 PF00440 Bacterial regulatory proteins, tetR family EJA96_00970 PF08362 YcdC-like protein, C-terminal region EJA96_00975 PF07969 Amidohydrolase family EJA96_00980 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EJA96_00990 PF01180 Dihydroorotate dehydrogenase EJA96_01000 PF01979 Amidohydrolase family EJA96_01015 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EJA96_01020 PF01546 Peptidase family M20/M25/M40 EJA96_01020 PF07687 Peptidase dimerisation domain EJA96_01025 PF02515 CoA-transferase family III EJA96_01030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_01030 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_01030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_01035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_01035 PF03466 LysR substrate binding domain EJA96_01045 PF01384 Phosphate transporter family EJA96_01055 PF16200 C-terminal region of band_7 EJA96_01055 PF01145 SPFH domain / Band 7 family EJA96_01065 PF12805 FUSC-like inner membrane protein yccS EJA96_01070 PF00270 DEAD/DEAH box helicase EJA96_01070 PF00271 Helicase conserved C-terminal domain EJA96_01070 PF03880 DbpA RNA binding domain EJA96_01075 PF00313 'Cold-shock' DNA-binding domain EJA96_01080 PF08443 RimK-like ATP-grasp domain EJA96_01080 PF18030 RimK PreATP-grasp domain EJA96_01085 PF07690 Major Facilitator Superfamily EJA96_01095 PF07724 AAA domain (Cdc48 subfamily) EJA96_01095 PF10431 C-terminal, D2-small domain, of ClpB protein EJA96_01095 PF02861 Clp amino terminal domain, pathogenicity island component EJA96_01095 PF17871 AAA lid domain EJA96_01095 PF00004 ATPase family associated with various cellular activities (AAA) EJA96_01110 PF01553 Acyltransferase EJA96_01120 PF00486 Transcriptional regulatory protein, C terminal EJA96_01120 PF00072 Response regulator receiver domain EJA96_01130 PF06123 Inner membrane protein CreD EJA96_01165 PF00593 TonB dependent receptor EJA96_01165 PF07715 TonB-dependent Receptor Plug Domain EJA96_01170 PF04773 FecR protein EJA96_01170 PF16220 Domain of unknown function (DUF4880) EJA96_01175 PF08281 Sigma-70, region 4 EJA96_01175 PF04542 Sigma-70 region 2 EJA96_01180 PF00043 Glutathione S-transferase, C-terminal domain EJA96_01180 PF13417 Glutathione S-transferase, N-terminal domain EJA96_01185 PF03061 Thioesterase superfamily EJA96_01190 PF00440 Bacterial regulatory proteins, tetR family EJA96_01195 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EJA96_01200 PF03466 LysR substrate binding domain EJA96_01200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_01215 PF12146 Serine aminopeptidase, S33 EJA96_01225 PF01274 Malate synthase EJA96_01240 PF00892 EamA-like transporter family EJA96_01250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_01250 PF03459 TOBE domain EJA96_01255 PF10043 Predicted periplasmic lipoprotein (DUF2279) EJA96_01260 PF00156 Phosphoribosyl transferase domain EJA96_01270 PF03466 LysR substrate binding domain EJA96_01270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_01275 PF03746 LamB/YcsF family EJA96_01280 PF00364 Biotin-requiring enzyme EJA96_01285 PF02785 Biotin carboxylase C-terminal domain EJA96_01285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EJA96_01285 PF00289 Biotin carboxylase, N-terminal domain EJA96_01295 PF02626 Carboxyltransferase domain, subdomain A and B EJA96_01305 PF06968 Biotin and Thiamin Synthesis associated domain EJA96_01305 PF04055 Radical SAM superfamily EJA96_01315 PF12697 Alpha/beta hydrolase family EJA96_01315 PF08241 Methyltransferase domain EJA96_01335 PF12806 Acetyl-CoA dehydrogenase C-terminal like EJA96_01335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_01335 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_01335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_01340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_01340 PF12806 Acetyl-CoA dehydrogenase C-terminal like EJA96_01340 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_01340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_01350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_01350 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_01350 PF12806 Acetyl-CoA dehydrogenase C-terminal like EJA96_01350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_01360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EJA96_01360 PF14824 Sirohaem biosynthesis protein central EJA96_01360 PF10414 Sirohaem synthase dimerisation region EJA96_01365 PF06463 Molybdenum Cofactor Synthesis C EJA96_01365 PF04055 Radical SAM superfamily EJA96_01370 PF17805 AsnC-like ligand binding domain EJA96_01375 PF17805 AsnC-like ligand binding domain EJA96_01380 PF17805 AsnC-like ligand binding domain EJA96_01385 PF17805 AsnC-like ligand binding domain EJA96_01385 PF13404 AsnC-type helix-turn-helix domain EJA96_01395 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EJA96_01400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EJA96_01405 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EJA96_01410 PF07728 AAA domain (dynein-related subfamily) EJA96_01410 PF08406 CbbQ/NirQ/NorQ C-terminal EJA96_01415 PF00510 Cytochrome c oxidase subunit III EJA96_01420 PF03626 Prokaryotic Cytochrome C oxidase subunit IV EJA96_01425 PF00034 Cytochrome c EJA96_01430 PF00115 Cytochrome C and Quinol oxidase polypeptide I EJA96_01445 PF13545 Crp-like helix-turn-helix domain EJA96_01445 PF00027 Cyclic nucleotide-binding domain EJA96_01450 PF03466 LysR substrate binding domain EJA96_01450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_01455 PF03475 3-alpha domain EJA96_01455 PF03473 MOSC domain EJA96_01470 PF00117 Glutamine amidotransferase class-I EJA96_01480 PF00196 Bacterial regulatory proteins, luxR family EJA96_01490 PF01266 FAD dependent oxidoreductase EJA96_01500 PF04536 TPM domain EJA96_01510 PF02600 Disulfide bond formation protein DsbB EJA96_01550 PF02772 S-adenosylmethionine synthetase, central domain EJA96_01550 PF00438 S-adenosylmethionine synthetase, N-terminal domain EJA96_01550 PF02773 S-adenosylmethionine synthetase, C-terminal domain EJA96_01560 PF02779 Transketolase, pyrimidine binding domain EJA96_01560 PF00456 Transketolase, thiamine diphosphate binding domain EJA96_01560 PF02780 Transketolase, C-terminal domain EJA96_01570 PF01261 Xylose isomerase-like TIM barrel EJA96_01575 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EJA96_01575 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EJA96_01580 PF00162 Phosphoglycerate kinase EJA96_01595 PF01116 Fructose-bisphosphate aldolase class-II EJA96_01610 PF08241 Methyltransferase domain EJA96_01620 PF01863 Protein of unknown function DUF45 EJA96_01625 PF13419 Haloacid dehalogenase-like hydrolase EJA96_01630 PF05656 Protein of unknown function (DUF805) EJA96_01635 PF02311 AraC-like ligand binding domain EJA96_01635 PF12833 Helix-turn-helix domain EJA96_01640 PF02627 Carboxymuconolactone decarboxylase family EJA96_01650 PF01679 Proteolipid membrane potential modulator EJA96_01670 PF09234 Domain of unknown function (DUF1963) EJA96_01675 PF18650 Immunomodulating metalloprotease N-terminal domain EJA96_01675 PF13402 Peptidase M60, enhancin and enhancin-like EJA96_01675 PF18642 Immunomodulating metalloprotease helical domain EJA96_01705 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJA96_01710 PF00990 Diguanylate cyclase, GGDEF domain EJA96_01710 PF00563 EAL domain EJA96_01710 PF03707 Bacterial signalling protein N terminal repeat EJA96_01715 PF04545 Sigma-70, region 4 EJA96_01715 PF03979 Sigma-70 factor, region 1.1 EJA96_01715 PF04539 Sigma-70 region 3 EJA96_01715 PF04542 Sigma-70 region 2 EJA96_01715 PF00140 Sigma-70 factor, region 1.2 EJA96_01715 PF04546 Sigma-70, non-essential region EJA96_01720 PF08275 DNA primase catalytic core, N-terminal domain EJA96_01720 PF13662 Toprim domain EJA96_01720 PF01807 CHC2 zinc finger EJA96_01720 PF08278 DNA primase DnaG DnaB-binding EJA96_01720 PF10410 DnaB-helicase binding domain of primase EJA96_01730 PF01165 Ribosomal protein S21 EJA96_01735 PF00814 Glycoprotease family EJA96_01740 PF02660 Glycerol-3-phosphate acyltransferase EJA96_01745 PF02152 Dihydroneopterin aldolase EJA96_01755 PF12627 Probable RNA and SrmB- binding site of polymerase A EJA96_01755 PF01966 HD domain EJA96_01755 PF01743 Poly A polymerase head domain EJA96_01765 PF04293 SpoVR like protein EJA96_01770 PF04285 Protein of unknown function (DUF444) EJA96_01775 PF08298 PrkA AAA domain EJA96_01775 PF06798 PrkA serine protein kinase C-terminal domain EJA96_01785 PF00581 Rhodanese-like domain EJA96_01790 PF00149 Calcineurin-like phosphoesterase EJA96_01795 PF04379 ApaG domain EJA96_01800 PF00398 Ribosomal RNA adenine dimethylase EJA96_01805 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EJA96_01810 PF00639 PPIC-type PPIASE domain EJA96_01810 PF09312 SurA N-terminal domain EJA96_01815 PF04453 LPS transport system D EJA96_01815 PF03968 OstA-like protein EJA96_01820 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJA96_01830 PF01636 Phosphotransferase enzyme family EJA96_01835 PF00483 Nucleotidyl transferase EJA96_01840 PF05099 Tellurite resistance protein TerB EJA96_01840 PF00226 DnaJ domain EJA96_01850 PF07730 Histidine kinase EJA96_01850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_01855 PF00072 Response regulator receiver domain EJA96_01855 PF00196 Bacterial regulatory proteins, luxR family EJA96_01865 PF08402 TOBE domain EJA96_01865 PF00005 ABC transporter EJA96_01875 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_01880 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_01885 PF00834 Ribulose-phosphate 3 epimerase family EJA96_01890 PF13419 Haloacid dehalogenase-like hydrolase EJA96_01895 PF00425 chorismate binding enzyme EJA96_01895 PF04715 Anthranilate synthase component I, N terminal region EJA96_01900 PF11112 Pyocin activator protein PrtN EJA96_01905 PF00717 Peptidase S24-like EJA96_01905 PF01381 Helix-turn-helix EJA96_01910 PF01258 Prokaryotic dksA/traR C4-type zinc finger EJA96_01960 PF04984 Phage tail sheath protein subtilisin-like domain EJA96_01960 PF17482 Phage tail sheath C-terminal domain EJA96_01995 PF00182 Chitinase class I EJA96_02010 PF00117 Glutamine amidotransferase class-I EJA96_02015 PF02885 Glycosyl transferase family, helical bundle domain EJA96_02015 PF00591 Glycosyl transferase family, a/b domain EJA96_02020 PF00218 Indole-3-glycerol phosphate synthase EJA96_02025 PF13545 Crp-like helix-turn-helix domain EJA96_02025 PF00027 Cyclic nucleotide-binding domain EJA96_02030 PF02566 OsmC-like protein EJA96_02035 PF02675 S-adenosylmethionine decarboxylase EJA96_02040 PF03232 Ubiquinone biosynthesis protein COQ7 EJA96_02045 PF01230 HIT domain EJA96_02050 PF06480 FtsH Extracellular EJA96_02050 PF17862 AAA+ lid domain EJA96_02050 PF00004 ATPase family associated with various cellular activities (AAA) EJA96_02050 PF01434 Peptidase family M41 EJA96_02055 PF00106 short chain dehydrogenase EJA96_02065 PF03060 Nitronate monooxygenase EJA96_02075 PF01118 Semialdehyde dehydrogenase, NAD binding domain EJA96_02075 PF02774 Semialdehyde dehydrogenase, dimerisation domain EJA96_02090 PF01521 Iron-sulphur cluster biosynthesis EJA96_02095 PF03702 Anhydro-N-acetylmuramic acid kinase EJA96_02100 PF04225 Opacity-associated protein A LysM-like domain EJA96_02100 PF01551 Peptidase family M23 EJA96_02105 PF00579 tRNA synthetases class I (W and Y) EJA96_02135 PF04403 Paraquat-inducible protein A EJA96_02140 PF04403 Paraquat-inducible protein A EJA96_02145 PF02470 MlaD protein EJA96_02150 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_02155 PF01547 Bacterial extracellular solute-binding protein EJA96_02200 PF00583 Acetyltransferase (GNAT) family EJA96_02210 PF00484 Carbonic anhydrase EJA96_02215 PF00593 TonB dependent receptor EJA96_02215 PF07715 TonB-dependent Receptor Plug Domain EJA96_02225 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB EJA96_02230 PF01381 Helix-turn-helix EJA96_02240 PF01926 50S ribosome-binding GTPase EJA96_02240 PF06071 Protein of unknown function (DUF933) EJA96_02245 PF01195 Peptidyl-tRNA hydrolase EJA96_02250 PF14693 Ribosomal protein TL5, C-terminal domain EJA96_02250 PF01386 Ribosomal L25p family EJA96_02255 PF14572 Phosphoribosyl synthetase-associated domain EJA96_02255 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EJA96_02265 PF00288 GHMP kinases N terminal domain EJA96_02265 PF08544 GHMP kinases C terminal EJA96_02270 PF03550 Outer membrane lipoprotein LolB EJA96_02280 PF01488 Shikimate / quinate 5-dehydrogenase EJA96_02280 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EJA96_02280 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EJA96_02285 PF00472 RF-1 domain EJA96_02285 PF03462 PCRF domain EJA96_02290 PF17827 PrmC N-terminal domain EJA96_02290 PF05175 Methyltransferase small domain EJA96_02295 PF00899 ThiF family EJA96_02300 PF01177 Asp/Glu/Hydantoin racemase EJA96_02305 PF09411 Lipid A 3-O-deacylase (PagL) EJA96_02310 PF03441 FAD binding domain of DNA photolyase EJA96_02310 PF00875 DNA photolyase EJA96_02315 PF13411 MerR HTH family regulatory protein EJA96_02325 PF01593 Flavin containing amine oxidoreductase EJA96_02330 PF08338 Domain of unknown function (DUF1731) EJA96_02330 PF01370 NAD dependent epimerase/dehydratase family EJA96_02335 PF00762 Ferrochelatase EJA96_02375 PF00860 Permease family EJA96_02410 PF06039 Malate:quinone oxidoreductase (Mqo) EJA96_02445 PF02308 MgtC family EJA96_02450 PF02586 SOS response associated peptidase (SRAP) EJA96_02455 PF00672 HAMP domain EJA96_02455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_02460 PF01435 Peptidase family M48 EJA96_02475 PF01169 Uncharacterized protein family UPF0016 EJA96_02480 PF00324 Amino acid permease EJA96_02490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EJA96_02490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EJA96_02500 PF08479 POTRA domain, ShlB-type EJA96_02500 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB EJA96_02500 PF17287 POTRA domain EJA96_02520 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EJA96_02525 PF01799 [2Fe-2S] binding domain EJA96_02525 PF00111 2Fe-2S iron-sulfur cluster binding domain EJA96_02530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EJA96_02530 PF00034 Cytochrome c EJA96_02550 PF03480 Bacterial extracellular solute-binding protein, family 7 EJA96_02555 PF00970 Oxidoreductase FAD-binding domain EJA96_02555 PF00175 Oxidoreductase NAD-binding domain EJA96_02560 PF01741 Large-conductance mechanosensitive channel, MscL EJA96_02570 PF06628 Catalase-related immune-responsive EJA96_02570 PF00199 Catalase EJA96_02590 PF18073 Rubredoxin metal binding domain EJA96_02595 PF07238 PilZ domain EJA96_02605 PF13722 5TM C-terminal transporter carbon starvation CstA EJA96_02605 PF02554 Carbon starvation protein CstA EJA96_02610 PF04328 Selenoprotein, putative EJA96_02615 PF07683 Cobalamin synthesis protein cobW C-terminal domain EJA96_02615 PF02492 CobW/HypB/UreG, nucleotide-binding domain EJA96_02625 PF00464 Serine hydroxymethyltransferase EJA96_02630 PF00563 EAL domain EJA96_02630 PF03707 Bacterial signalling protein N terminal repeat EJA96_02630 PF00990 Diguanylate cyclase, GGDEF domain EJA96_02640 PF00529 HlyD membrane-fusion protein of T1SS EJA96_02640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EJA96_02645 PF00873 AcrB/AcrD/AcrF family EJA96_02650 PF02321 Outer membrane efflux protein EJA96_02665 PF12848 ABC transporter EJA96_02665 PF00005 ABC transporter EJA96_02670 PF12704 MacB-like periplasmic core domain EJA96_02670 PF02687 FtsX-like permease family EJA96_02670 PF00005 ABC transporter EJA96_02675 PF02687 FtsX-like permease family EJA96_02675 PF12704 MacB-like periplasmic core domain EJA96_02675 PF00005 ABC transporter EJA96_02700 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EJA96_02700 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EJA96_02705 PF00034 Cytochrome c EJA96_02705 PF03150 Di-haem cytochrome c peroxidase EJA96_02720 PF10127 RNA repair pathway DNA polymerase beta family EJA96_02725 PF01139 tRNA-splicing ligase RtcB EJA96_02740 PF06956 Regulator of RNA terminal phosphate cyclase EJA96_02740 PF00158 Sigma-54 interaction domain EJA96_02765 PF05362 Lon protease (S16) C-terminal proteolytic domain EJA96_02765 PF13654 AAA domain EJA96_02775 PF03350 Uncharacterized protein family, UPF0114 EJA96_02785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EJA96_02785 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EJA96_02790 PF00034 Cytochrome c EJA96_02790 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EJA96_02800 PF00348 Polyprenyl synthetase EJA96_02805 PF00829 Ribosomal prokaryotic L21 protein EJA96_02810 PF01016 Ribosomal L27 protein EJA96_02815 PF01926 50S ribosome-binding GTPase EJA96_02815 PF01018 GTP1/OBG EJA96_02820 PF01472 PUA domain EJA96_02820 PF00696 Amino acid kinase family EJA96_02825 PF05981 CreA protein EJA96_02830 PF01649 Ribosomal protein S20 EJA96_02835 PF03023 Lipid II flippase MurJ EJA96_02840 PF01687 Riboflavin kinase EJA96_02840 PF06574 FAD synthetase EJA96_02845 PF08264 Anticodon-binding domain of tRNA EJA96_02845 PF06827 Zinc finger found in FPG and IleRS EJA96_02845 PF00133 tRNA synthetases class I (I, L, M and V) EJA96_02850 PF01252 Signal peptidase (SPase) II EJA96_02855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EJA96_02860 PF02401 LytB protein EJA96_02865 PF07963 Prokaryotic N-terminal methylation motif EJA96_02865 PF14245 Type IV pilin PilA EJA96_02875 PF05567 Neisseria PilC beta-propeller domain EJA96_02905 PF01266 FAD dependent oxidoreductase EJA96_02910 PF00158 Sigma-54 interaction domain EJA96_02910 PF00072 Response regulator receiver domain EJA96_02910 PF02954 Bacterial regulatory protein, Fis family EJA96_02915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_02915 PF00512 His Kinase A (phospho-acceptor) domain EJA96_02925 PF13525 Outer membrane lipoprotein EJA96_02930 PF00849 RNA pseudouridylate synthase EJA96_02930 PF01479 S4 domain EJA96_02940 PF10431 C-terminal, D2-small domain, of ClpB protein EJA96_02940 PF00004 ATPase family associated with various cellular activities (AAA) EJA96_02940 PF07724 AAA domain (Cdc48 subfamily) EJA96_02940 PF02861 Clp amino terminal domain, pathogenicity island component EJA96_02940 PF17871 AAA lid domain EJA96_02960 PF00589 Phage integrase family EJA96_02970 PF00872 Transposase, Mutator family EJA96_02985 PF05016 ParE toxin of type II toxin-antitoxin system, parDE EJA96_02990 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH EJA96_03100 PF12705 PD-(D/E)XK nuclease superfamily EJA96_03100 PF00580 UvrD/REP helicase N-terminal domain EJA96_03100 PF13361 UvrD-like helicase C-terminal domain EJA96_03245 PF04917 Bacterial shufflon protein, N-terminal constant region EJA96_03250 PF00437 Type II/IV secretion system protein EJA96_03250 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EJA96_03265 PF00437 Type II/IV secretion system protein EJA96_03290 PF05973 Phage derived protein Gp49-like (DUF891) EJA96_03295 PF01381 Helix-turn-helix EJA96_03305 PF00271 Helicase conserved C-terminal domain EJA96_03305 PF00176 SNF2 family N-terminal domain EJA96_03320 PF01131 DNA topoisomerase EJA96_03320 PF01751 Toprim domain EJA96_03320 PF01396 Topoisomerase DNA binding C4 zinc finger EJA96_03400 PF04245 37-kD nucleoid-associated bacterial protein EJA96_03440 PF00772 DnaB-like helicase N terminal domain EJA96_03440 PF03796 DnaB-like helicase C terminal domain EJA96_03480 PF13614 AAA domain EJA96_03485 PF05860 haemagglutination activity domain EJA96_03490 PF08479 POTRA domain, ShlB-type EJA96_03490 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB EJA96_03495 PF03969 AFG1-like ATPase EJA96_03500 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_03540 PF03884 DNA gyrase inhibitor YacG EJA96_03545 PF01121 Dephospho-CoA kinase EJA96_03550 PF01478 Type IV leader peptidase family EJA96_03550 PF06750 Bacterial Peptidase A24 N-terminal domain EJA96_03555 PF00482 Type II secretion system (T2SS), protein F EJA96_03560 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EJA96_03560 PF00437 Type II/IV secretion system protein EJA96_03565 PF00114 Pilin (bacterial filament) EJA96_03565 PF07963 Prokaryotic N-terminal methylation motif EJA96_03580 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EJA96_03580 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EJA96_03590 PF01510 N-acetylmuramoyl-L-alanine amidase EJA96_03600 PF00672 HAMP domain EJA96_03600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_03600 PF02743 Cache domain EJA96_03605 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EJA96_03605 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EJA96_03615 PF00884 Sulfatase EJA96_03625 PF18331 PKHD-type hydroxylase C-terminal domain EJA96_03625 PF13640 2OG-Fe(II) oxygenase superfamily EJA96_03630 PF07715 TonB-dependent Receptor Plug Domain EJA96_03630 PF00593 TonB dependent receptor EJA96_03635 PF00175 Oxidoreductase NAD-binding domain EJA96_03635 PF00667 FAD binding domain EJA96_03635 PF00258 Flavodoxin EJA96_03645 PF03746 LamB/YcsF family EJA96_03655 PF02626 Carboxyltransferase domain, subdomain A and B EJA96_03660 PF01037 Lrp/AsnC ligand binding domain EJA96_03665 PF01810 LysE type translocator EJA96_03670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EJA96_03670 PF00005 ABC transporter EJA96_03675 PF00005 ABC transporter EJA96_03675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EJA96_03680 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_03680 PF12911 N-terminal TM domain of oligopeptide transport permease C EJA96_03685 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_03690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EJA96_03705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EJA96_03715 PF00557 Metallopeptidase family M24 EJA96_03715 PF01321 Creatinase/Prolidase N-terminal domain EJA96_03720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EJA96_03725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EJA96_03735 PF00512 His Kinase A (phospho-acceptor) domain EJA96_03735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_03740 PF00072 Response regulator receiver domain EJA96_03745 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) EJA96_03750 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) EJA96_03755 PF06672 Protein of unknown function (DUF1175) EJA96_03760 PF01835 MG2 domain EJA96_03760 PF07703 Alpha-2-macroglobulin bait region domain EJA96_03760 PF00207 Alpha-2-macroglobulin family EJA96_03765 PF10062 Predicted secreted protein (DUF2300) EJA96_03765 PF08486 Stage II sporulation protein EJA96_03770 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) EJA96_03775 PF02627 Carboxymuconolactone decarboxylase family EJA96_03780 PF03330 Lytic transglycolase EJA96_03785 PF02934 GatB/GatE catalytic domain EJA96_03785 PF02637 GatB domain EJA96_03790 PF01425 Amidase EJA96_03795 PF02686 Glu-tRNAGln amidotransferase C subunit EJA96_03815 PF02545 Maf-like protein EJA96_03820 PF00575 S1 RNA binding domain EJA96_03820 PF10150 Ribonuclease E/G family EJA96_03835 PF01523 Putative modulator of DNA gyrase EJA96_03840 PF04751 Protein of unknown function (DUF615) EJA96_03845 PF01523 Putative modulator of DNA gyrase EJA96_03855 PF10415 Fumarase C C-terminus EJA96_03855 PF00206 Lyase EJA96_03865 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EJA96_03865 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EJA96_03870 PF02535 ZIP Zinc transporter EJA96_03875 PF00381 PTS HPr component phosphorylation site EJA96_03880 PF03668 P-loop ATPase protein family EJA96_03885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EJA96_03890 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EJA96_03895 PF04552 Sigma-54, DNA binding domain EJA96_03895 PF00309 Sigma-54 factor, Activator interacting domain (AID) EJA96_03895 PF04963 Sigma-54 factor, core binding domain EJA96_03900 PF12399 Branched-chain amino acid ATP-binding cassette transporter EJA96_03900 PF00005 ABC transporter EJA96_03920 PF00571 CBS domain EJA96_03920 PF01380 SIS domain EJA96_03925 PF00005 ABC transporter EJA96_03930 PF02405 Permease MlaE EJA96_03935 PF02470 MlaD protein EJA96_03940 PF05494 MlaC protein EJA96_03955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EJA96_03960 PF01634 ATP phosphoribosyltransferase EJA96_03965 PF00815 Histidinol dehydrogenase EJA96_03970 PF00155 Aminotransferase class I and II EJA96_03975 PF13180 PDZ domain EJA96_03980 PF01784 NIF3 (NGG1p interacting factor 3) EJA96_03985 PF13406 Transglycosylase SLT domain EJA96_03990 PF01507 Phosphoadenosine phosphosulfate reductase family EJA96_03995 PF00009 Elongation factor Tu GTP binding domain EJA96_04005 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EJA96_04010 PF00579 tRNA synthetases class I (W and Y) EJA96_04015 PF03969 AFG1-like ATPase EJA96_04030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_04030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_04030 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_04035 PF00248 Aldo/keto reductase family EJA96_04040 PF00572 Ribosomal protein L13 EJA96_04045 PF00380 Ribosomal protein S9/S16 EJA96_04050 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EJA96_04050 PF00355 Rieske [2Fe-2S] domain EJA96_04055 PF00033 Cytochrome b/b6/petB EJA96_04055 PF00032 Cytochrome b(C-terminal)/b6/petD EJA96_04060 PF02167 Cytochrome C1 family EJA96_04065 PF00043 Glutathione S-transferase, C-terminal domain EJA96_04065 PF02798 Glutathione S-transferase, N-terminal domain EJA96_04070 PF04386 Stringent starvation protein B EJA96_04075 PF04972 BON domain EJA96_04080 PF13580 SIS domain EJA96_04085 PF02021 Uncharacterised protein family UPF0102 EJA96_04090 PF04348 LppC putative lipoprotein EJA96_04095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EJA96_04105 PF02381 MraZ protein, putative antitoxin-like EJA96_04110 PF01795 MraW methylase family EJA96_04115 PF04999 Cell division protein FtsL EJA96_04120 PF00905 Penicillin binding protein transpeptidase domain EJA96_04120 PF03717 Penicillin-binding Protein dimerisation domain EJA96_04125 PF08245 Mur ligase middle domain EJA96_04125 PF01225 Mur ligase family, catalytic domain EJA96_04125 PF02875 Mur ligase family, glutamate ligase domain EJA96_04130 PF08245 Mur ligase middle domain EJA96_04130 PF02875 Mur ligase family, glutamate ligase domain EJA96_04130 PF01225 Mur ligase family, catalytic domain EJA96_04135 PF00953 Glycosyl transferase family 4 EJA96_04135 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EJA96_04140 PF08245 Mur ligase middle domain EJA96_04140 PF02875 Mur ligase family, glutamate ligase domain EJA96_04145 PF01098 Cell cycle protein EJA96_04150 PF04101 Glycosyltransferase family 28 C-terminal domain EJA96_04150 PF03033 Glycosyltransferase family 28 N-terminal domain EJA96_04155 PF02875 Mur ligase family, glutamate ligase domain EJA96_04155 PF08245 Mur ligase middle domain EJA96_04155 PF01225 Mur ligase family, catalytic domain EJA96_04160 PF07478 D-ala D-ala ligase C-terminus EJA96_04160 PF01820 D-ala D-ala ligase N-terminus EJA96_04165 PF03799 Cell division protein FtsQ EJA96_04165 PF08478 POTRA domain, FtsQ-type EJA96_04170 PF02491 SHS2 domain inserted in FTSA EJA96_04175 PF12327 FtsZ family, C-terminal domain EJA96_04175 PF00091 Tubulin/FtsZ family, GTPase domain EJA96_04180 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EJA96_04190 PF01464 Transglycosylase SLT domain EJA96_04190 PF01551 Peptidase family M23 EJA96_04190 PF10145 Phage-related minor tail protein EJA96_04200 PF02810 SEC-C motif EJA96_04200 PF07516 SecA Wing and Scaffold domain EJA96_04200 PF01043 SecA preprotein cross-linking domain EJA96_04200 PF07517 SecA DEAD-like domain EJA96_04205 PF01960 ArgJ family EJA96_04210 PF13417 Glutathione S-transferase, N-terminal domain EJA96_04210 PF00043 Glutathione S-transferase, C-terminal domain EJA96_04215 PF00293 NUDIX domain EJA96_04220 PF01923 Cobalamin adenosyltransferase EJA96_04225 PF00072 Response regulator receiver domain EJA96_04225 PF00512 His Kinase A (phospho-acceptor) domain EJA96_04225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_04225 PF08448 PAS fold EJA96_04225 PF13188 PAS domain EJA96_04230 PF02558 Ketopantoate reductase PanE/ApbA EJA96_04230 PF08546 Ketopantoate reductase PanE/ApbA C terminal EJA96_04240 PF04461 Protein of unknown function (DUF520) EJA96_04245 PF05552 Conserved TM helix EJA96_04245 PF00924 Mechanosensitive ion channel EJA96_04250 PF07690 Major Facilitator Superfamily EJA96_04280 PF04186 FxsA cytoplasmic membrane protein EJA96_04285 PF00166 Chaperonin 10 Kd subunit EJA96_04290 PF00118 TCP-1/cpn60 chaperonin family EJA96_04300 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EJA96_04315 PF00486 Transcriptional regulatory protein, C terminal EJA96_04315 PF00072 Response regulator receiver domain EJA96_04320 PF00512 His Kinase A (phospho-acceptor) domain EJA96_04320 PF00672 HAMP domain EJA96_04320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_04340 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EJA96_04340 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EJA96_04345 PF00873 AcrB/AcrD/AcrF family EJA96_04350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EJA96_04375 PF04011 LemA family EJA96_04390 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EJA96_04390 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EJA96_04405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_04405 PF03466 LysR substrate binding domain EJA96_04415 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family EJA96_04430 PF04023 FeoA domain EJA96_04435 PF07670 Nucleoside recognition EJA96_04435 PF17910 FeoB cytosolic helical domain EJA96_04435 PF02421 Ferrous iron transport protein B EJA96_04435 PF07664 Ferrous iron transport protein B C terminus EJA96_04440 PF09012 FeoC like transcriptional regulator EJA96_04445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EJA96_04450 PF07690 Major Facilitator Superfamily EJA96_04465 PF00582 Universal stress protein family EJA96_04485 PF00258 Flavodoxin EJA96_04485 PF01613 Flavin reductase like domain EJA96_04490 PF11954 Domain of unknown function (DUF3471) EJA96_04490 PF00144 Beta-lactamase EJA96_04505 PF01546 Peptidase family M20/M25/M40 EJA96_04505 PF07687 Peptidase dimerisation domain EJA96_04510 PF07690 Major Facilitator Superfamily EJA96_04530 PF13091 PLD-like domain EJA96_04530 PF13396 Phospholipase_D-nuclease N-terminal EJA96_04545 PF01965 DJ-1/PfpI family EJA96_04555 PF01566 Natural resistance-associated macrophage protein EJA96_04560 PF05683 Fumarase C-terminus EJA96_04560 PF05681 Fumarate hydratase (Fumerase) EJA96_04565 PF08448 PAS fold EJA96_04565 PF00990 Diguanylate cyclase, GGDEF domain EJA96_04570 PF00970 Oxidoreductase FAD-binding domain EJA96_04570 PF00175 Oxidoreductase NAD-binding domain EJA96_04575 PF00378 Enoyl-CoA hydratase/isomerase EJA96_04580 PF02887 Pyruvate kinase, alpha/beta domain EJA96_04580 PF00224 Pyruvate kinase, barrel domain EJA96_04585 PF00582 Universal stress protein family EJA96_04615 PF17863 AAA lid domain EJA96_04615 PF07726 ATPase family associated with various cellular activities (AAA) EJA96_04645 PF08411 Exonuclease C-terminal EJA96_04645 PF00929 Exonuclease EJA96_04655 PF01842 ACT domain EJA96_04655 PF00551 Formyl transferase EJA96_04675 PF00534 Glycosyl transferases group 1 EJA96_04675 PF13439 Glycosyltransferase Family 4 EJA96_04685 PF00672 HAMP domain EJA96_04685 PF02743 Cache domain EJA96_04685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_04690 PF00672 HAMP domain EJA96_04690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_04690 PF02743 Cache domain EJA96_04695 PF05872 Bacterial protein of unknown function (DUF853) EJA96_04700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_04700 PF00672 HAMP domain EJA96_04700 PF02743 Cache domain EJA96_04715 PF04972 BON domain EJA96_04715 PF00263 Bacterial type II and III secretion system protein EJA96_04715 PF13629 Pilus formation protein N terminal region EJA96_04725 PF00437 Type II/IV secretion system protein EJA96_04755 PF00196 Bacterial regulatory proteins, luxR family EJA96_04755 PF00072 Response regulator receiver domain EJA96_04775 PF01384 Phosphate transporter family EJA96_04785 PF00672 HAMP domain EJA96_04785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_04785 PF02743 Cache domain EJA96_04800 PF00892 EamA-like transporter family EJA96_04820 PF13538 UvrD-like helicase C-terminal domain EJA96_04830 PF12320 Type 5 capsule protein repressor C-terminal domain EJA96_04830 PF00149 Calcineurin-like phosphoesterase EJA96_04860 PF07733 Bacterial DNA polymerase III alpha NTPase domain EJA96_04860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EJA96_04860 PF14579 Helix-hairpin-helix motif EJA96_04860 PF02811 PHP domain EJA96_04875 PF01126 Heme oxygenase EJA96_04900 PF11612 Type II secretion system (T2SS), protein J EJA96_04900 PF07963 Prokaryotic N-terminal methylation motif EJA96_04905 PF07963 Prokaryotic N-terminal methylation motif EJA96_04905 PF12019 Type II transport protein GspH EJA96_04915 PF07963 Prokaryotic N-terminal methylation motif EJA96_04915 PF02501 Type II secretion system (T2SS), protein I EJA96_04920 PF08334 Type II secretion system (T2SS), protein G EJA96_04920 PF07963 Prokaryotic N-terminal methylation motif EJA96_04925 PF03934 Type II secretion system (T2SS), protein K EJA96_04940 PF03958 Bacterial type II/III secretion system short domain EJA96_04940 PF00263 Bacterial type II and III secretion system protein EJA96_04945 PF00437 Type II/IV secretion system protein EJA96_04970 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB EJA96_04970 PF17287 POTRA domain EJA96_04970 PF08479 POTRA domain, ShlB-type EJA96_04980 PF02472 Biopolymer transport protein ExbD/TolR EJA96_05005 PF00639 PPIC-type PPIASE domain EJA96_05015 PF03466 LysR substrate binding domain EJA96_05015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_05030 PF07690 Major Facilitator Superfamily EJA96_05035 PF01425 Amidase EJA96_05040 PF00132 Bacterial transferase hexapeptide (six repeats) EJA96_05045 PF00535 Glycosyl transferase family 2 EJA96_05050 PF00132 Bacterial transferase hexapeptide (six repeats) EJA96_05055 PF00563 EAL domain EJA96_05060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_05060 PF03466 LysR substrate binding domain EJA96_05070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EJA96_05080 PF09857 Putative toxin of bacterial toxin-antitoxin pair EJA96_05150 PF05707 Zonular occludens toxin (Zot) EJA96_05160 PF00589 Phage integrase family EJA96_05160 PF02899 Phage integrase, N-terminal SAM-like domain EJA96_05180 PF00561 alpha/beta hydrolase fold EJA96_05195 PF00849 RNA pseudouridylate synthase EJA96_05195 PF01479 S4 domain EJA96_05235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_05235 PF03466 LysR substrate binding domain EJA96_05240 PF00753 Metallo-beta-lactamase superfamily EJA96_05240 PF14864 Alkyl sulfatase C-terminal EJA96_05240 PF14863 Alkyl sulfatase dimerisation EJA96_05245 PF13460 NAD(P)H-binding EJA96_05275 PF00171 Aldehyde dehydrogenase family EJA96_05280 PF02311 AraC-like ligand binding domain EJA96_05280 PF12833 Helix-turn-helix domain EJA96_05285 PF04294 VanW like protein EJA96_05290 PF03167 Uracil DNA glycosylase superfamily EJA96_05300 PF01970 Tripartite tricarboxylate transporter TctA family EJA96_05315 PF03573 outer membrane porin, OprD family EJA96_05320 PF00486 Transcriptional regulatory protein, C terminal EJA96_05320 PF00072 Response regulator receiver domain EJA96_05325 PF00512 His Kinase A (phospho-acceptor) domain EJA96_05325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_05335 PF01571 Aminomethyltransferase folate-binding domain EJA96_05340 PF03937 Flavinator of succinate dehydrogenase EJA96_05350 PF02910 Fumarate reductase flavoprotein C-term EJA96_05350 PF00890 FAD binding domain EJA96_05355 PF08281 Sigma-70, region 4 EJA96_05355 PF04542 Sigma-70 region 2 EJA96_05360 PF03873 Anti sigma-E protein RseA, C-terminal domain EJA96_05360 PF03872 Anti sigma-E protein RseA, N-terminal domain EJA96_05365 PF17188 MucB/RseB C-terminal domain EJA96_05365 PF03888 MucB/RseB N-terminal domain EJA96_05375 PF13180 PDZ domain EJA96_05380 PF00679 Elongation factor G C-terminus EJA96_05380 PF06421 GTP-binding protein LepA C-terminus EJA96_05380 PF03144 Elongation factor Tu domain 2 EJA96_05380 PF00009 Elongation factor Tu GTP binding domain EJA96_05385 PF10502 Signal peptidase, peptidase S26 EJA96_05395 PF00035 Double-stranded RNA binding motif EJA96_05395 PF14622 Ribonuclease-III-like EJA96_05400 PF01926 50S ribosome-binding GTPase EJA96_05400 PF07650 KH domain EJA96_05405 PF11967 Recombination protein O N terminal EJA96_05405 PF02565 Recombination protein O C terminal EJA96_05410 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EJA96_05415 PF08003 Protein of unknown function (DUF1698) EJA96_05420 PF13649 Methyltransferase domain EJA96_05440 PF00004 ATPase family associated with various cellular activities (AAA) EJA96_05440 PF05362 Lon protease (S16) C-terminal proteolytic domain EJA96_05440 PF02190 ATP-dependent protease La (LON) substrate-binding domain EJA96_05445 PF12833 Helix-turn-helix domain EJA96_05450 PF00593 TonB dependent receptor EJA96_05450 PF07715 TonB-dependent Receptor Plug Domain EJA96_05455 PF01619 Proline dehydrogenase EJA96_05455 PF14850 DNA-binding domain of Proline dehydrogenase EJA96_05455 PF00171 Aldehyde dehydrogenase family EJA96_05455 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EJA96_05460 PF00474 Sodium:solute symporter family EJA96_05465 PF03466 LysR substrate binding domain EJA96_05465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_05470 PF02525 Flavodoxin-like fold EJA96_05475 PF00893 Small Multidrug Resistance protein EJA96_05500 PF00324 Amino acid permease EJA96_05515 PF03972 MmgE/PrpD family EJA96_05520 PF04303 PrpF protein EJA96_05525 PF00330 Aconitase family (aconitate hydratase) EJA96_05525 PF00694 Aconitase C-terminal domain EJA96_05530 PF00285 Citrate synthase, C-terminal domain EJA96_05540 PF07729 FCD domain EJA96_05540 PF00392 Bacterial regulatory proteins, gntR family EJA96_05545 PF08241 Methyltransferase domain EJA96_05550 PF00176 SNF2 family N-terminal domain EJA96_05550 PF12419 SNF2 Helicase protein EJA96_05550 PF00271 Helicase conserved C-terminal domain EJA96_05575 PF00248 Aldo/keto reductase family EJA96_05590 PF01510 N-acetylmuramoyl-L-alanine amidase EJA96_05600 PF01566 Natural resistance-associated macrophage protein EJA96_05605 PF13419 Haloacid dehalogenase-like hydrolase EJA96_05630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_05630 PF03466 LysR substrate binding domain EJA96_05635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_05635 PF03466 LysR substrate binding domain EJA96_05700 PF08361 MAATS-type transcriptional repressor, C-terminal region EJA96_05700 PF00440 Bacterial regulatory proteins, tetR family EJA96_05705 PF00561 alpha/beta hydrolase fold EJA96_05715 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EJA96_05715 PF12833 Helix-turn-helix domain EJA96_05720 PF00753 Metallo-beta-lactamase superfamily EJA96_05725 PF13488 Glycine zipper EJA96_05725 PF00691 OmpA family EJA96_05730 PF01553 Acyltransferase EJA96_05735 PF01515 Phosphate acetyl/butaryl transferase EJA96_05735 PF07085 DRTGG domain EJA96_05740 PF00871 Acetokinase family EJA96_05750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EJA96_05755 PF00255 Glutathione peroxidase EJA96_05760 PF16925 Tetracyclin repressor-like, C-terminal domain EJA96_05760 PF00440 Bacterial regulatory proteins, tetR family EJA96_05765 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_05765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EJA96_05770 PF02645 Uncharacterised protein, DegV family COG1307 EJA96_05775 PF13439 Glycosyltransferase Family 4 EJA96_05775 PF00534 Glycosyl transferases group 1 EJA96_05785 PF04185 Phosphoesterase family EJA96_05785 PF05506 Domain of unknown function (DUF756) EJA96_05790 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal EJA96_05790 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal EJA96_05800 PF00563 EAL domain EJA96_05800 PF08448 PAS fold EJA96_05800 PF00990 Diguanylate cyclase, GGDEF domain EJA96_05800 PF08447 PAS fold EJA96_05800 PF13426 PAS domain EJA96_05800 PF05231 MASE1 EJA96_05805 PF00578 AhpC/TSA family EJA96_05805 PF10417 C-terminal domain of 1-Cys peroxiredoxin EJA96_05810 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_05820 PF00291 Pyridoxal-phosphate dependent enzyme EJA96_05825 PF18416 N-acetylglucosamine binding protein domain 2 EJA96_05825 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading EJA96_05835 PF10415 Fumarase C C-terminus EJA96_05835 PF00206 Lyase EJA96_05850 PF01722 BolA-like protein EJA96_05865 PF00664 ABC transporter transmembrane region EJA96_05865 PF00005 ABC transporter EJA96_05870 PF00563 EAL domain EJA96_05870 PF08448 PAS fold EJA96_05870 PF00990 Diguanylate cyclase, GGDEF domain EJA96_05880 PF00107 Zinc-binding dehydrogenase EJA96_05880 PF14765 Polyketide synthase dehydratase EJA96_05880 PF00550 Phosphopantetheine attachment site EJA96_05880 PF02801 Beta-ketoacyl synthase, C-terminal domain EJA96_05880 PF08240 Alcohol dehydrogenase GroES-like domain EJA96_05880 PF00698 Acyl transferase domain EJA96_05880 PF16197 Ketoacyl-synthetase C-terminal extension EJA96_05880 PF00109 Beta-ketoacyl synthase, N-terminal domain EJA96_05880 PF08659 KR domain EJA96_05900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EJA96_05905 PF00324 Amino acid permease EJA96_05910 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme EJA96_05915 PF00472 RF-1 domain EJA96_05920 PF00768 D-alanyl-D-alanine carboxypeptidase EJA96_05930 PF01329 Pterin 4 alpha carbinolamine dehydratase EJA96_05935 PF00351 Biopterin-dependent aromatic amino acid hydroxylase EJA96_05940 PF00158 Sigma-54 interaction domain EJA96_05940 PF18024 Helix-turn-helix domain EJA96_05960 PF04632 Fusaric acid resistance protein family EJA96_05965 PF03466 LysR substrate binding domain EJA96_05965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_05970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_05970 PF03466 LysR substrate binding domain EJA96_05980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_05980 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_05980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_05985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EJA96_05990 PF03972 MmgE/PrpD family EJA96_05995 PF02515 CoA-transferase family III EJA96_06000 PF03328 HpcH/HpaI aldolase/citrate lyase family EJA96_06005 PF03480 Bacterial extracellular solute-binding protein, family 7 EJA96_06010 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EJA96_06015 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EJA96_06020 PF00501 AMP-binding enzyme EJA96_06020 PF16177 Acetyl-coenzyme A synthetase N-terminus EJA96_06020 PF13193 AMP-binding enzyme C-terminal domain EJA96_06025 PF00497 Bacterial extracellular solute-binding proteins, family 3 EJA96_06030 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_06035 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_06045 PF00005 ABC transporter EJA96_06050 PF12833 Helix-turn-helix domain EJA96_06060 PF00202 Aminotransferase class-III EJA96_06065 PF04958 Arginine N-succinyltransferase beta subunit EJA96_06075 PF00171 Aldehyde dehydrogenase family EJA96_06080 PF04996 Succinylarginine dihydrolase EJA96_06090 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EJA96_06095 PF01212 Beta-eliminating lyase EJA96_06100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EJA96_06100 PF02272 DHHA1 domain EJA96_06100 PF01411 tRNA synthetases class II (A) EJA96_06105 PF00696 Amino acid kinase family EJA96_06105 PF01842 ACT domain EJA96_06105 PF13840 ACT domain EJA96_06110 PF02599 Global regulator protein family EJA96_06130 PF00717 Peptidase S24-like EJA96_06130 PF01381 Helix-turn-helix EJA96_06165 PF00571 CBS domain EJA96_06165 PF01769 Divalent cation transporter EJA96_06165 PF03448 MgtE intracellular N domain EJA96_06175 PF07308 Protein of unknown function (DUF1456) EJA96_06180 PF04055 Radical SAM superfamily EJA96_06180 PF18693 TRAM domain EJA96_06180 PF00919 Uncharacterized protein family UPF0004 EJA96_06190 PF02705 K+ potassium transporter EJA96_06195 PF01292 Prokaryotic cytochrome b561 EJA96_06205 PF03706 Lysylphosphatidylglycerol synthase TM region EJA96_06205 PF09924 Uncharacterised conserved protein (DUF2156) EJA96_06225 PF11799 impB/mucB/samB family C-terminal domain EJA96_06225 PF11798 IMS family HHH motif EJA96_06225 PF00817 impB/mucB/samB family EJA96_06230 PF00884 Sulfatase EJA96_06230 PF11893 Domain of unknown function (DUF3413) EJA96_06245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EJA96_06245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EJA96_06250 PF00672 HAMP domain EJA96_06250 PF00512 His Kinase A (phospho-acceptor) domain EJA96_06250 PF01627 Hpt domain EJA96_06250 PF00072 Response regulator receiver domain EJA96_06250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EJA96_06250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_06255 PF00072 Response regulator receiver domain EJA96_06255 PF00486 Transcriptional regulatory protein, C terminal EJA96_06260 PF00672 HAMP domain EJA96_06260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_06260 PF00512 His Kinase A (phospho-acceptor) domain EJA96_06260 PF16750 Sensor domain of 2-component histidine kinase EJA96_06265 PF07715 TonB-dependent Receptor Plug Domain EJA96_06265 PF00593 TonB dependent receptor EJA96_06270 PF00291 Pyridoxal-phosphate dependent enzyme EJA96_06275 PF05958 tRNA (Uracil-5-)-methyltransferase EJA96_06280 PF04607 Region found in RelA / SpoT proteins EJA96_06280 PF13291 ACT domain EJA96_06280 PF02824 TGS domain EJA96_06285 PF03819 MazG nucleotide pyrophosphohydrolase domain EJA96_06295 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) EJA96_06335 PF00551 Formyl transferase EJA96_06340 PF00586 AIR synthase related protein, N-terminal domain EJA96_06340 PF02769 AIR synthase related protein, C-terminal domain EJA96_06355 PF00308 Bacterial dnaA protein EJA96_06365 PF03358 NADPH-dependent FMN reductase EJA96_06370 PF03960 ArsC family EJA96_06375 PF03631 Virulence factor BrkB EJA96_06390 PF00085 Thioredoxin EJA96_06395 PF00708 Acylphosphatase EJA96_06405 PF03129 Anticodon binding domain EJA96_06405 PF04073 Aminoacyl-tRNA editing domain EJA96_06405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EJA96_06415 PF03573 outer membrane porin, OprD family EJA96_06425 PF04102 SlyX EJA96_06430 PF00313 'Cold-shock' DNA-binding domain EJA96_06435 PF00210 Ferritin-like domain EJA96_06440 PF02938 GAD domain EJA96_06440 PF01336 OB-fold nucleic acid binding domain EJA96_06440 PF00152 tRNA synthetases class II (D, K and N) EJA96_06445 PF01709 Transcriptional regulator EJA96_06450 PF02075 Crossover junction endodeoxyribonuclease RuvC EJA96_06455 PF07499 RuvA, C-terminal domain EJA96_06455 PF01330 RuvA N terminal domain EJA96_06460 PF05496 Holliday junction DNA helicase RuvB P-loop domain EJA96_06460 PF05491 RuvB C-terminal winged helix domain EJA96_06460 PF17864 RuvB AAA lid domain EJA96_06465 PF03061 Thioesterase superfamily EJA96_06470 PF01618 MotA/TolQ/ExbB proton channel family EJA96_06475 PF02472 Biopolymer transport protein ExbD/TolR EJA96_06485 PF07676 WD40-like Beta Propeller Repeat EJA96_06485 PF04052 TolB amino-terminal domain EJA96_06490 PF00691 OmpA family EJA96_06495 PF13525 Outer membrane lipoprotein EJA96_06495 PF16331 TolA binding protein trimerisation EJA96_06500 PF04055 Radical SAM superfamily EJA96_06505 PF06508 Queuosine biosynthesis protein QueC EJA96_06520 PF00589 Phage integrase family EJA96_06530 PF01494 FAD binding domain EJA96_06535 PF07883 Cupin domain EJA96_06540 PF00753 Metallo-beta-lactamase superfamily EJA96_06545 PF05199 GMC oxidoreductase EJA96_06545 PF00732 GMC oxidoreductase EJA96_06550 PF03466 LysR substrate binding domain EJA96_06550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_06555 PF00596 Class II Aldolase and Adducin N-terminal domain EJA96_06560 PF00171 Aldehyde dehydrogenase family EJA96_06580 PF00999 Sodium/hydrogen exchanger family EJA96_06580 PF02254 TrkA-N domain EJA96_06650 PF00293 NUDIX domain EJA96_06650 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain EJA96_06650 PF09297 NADH pyrophosphatase zinc ribbon domain EJA96_06660 PF00419 Fimbrial protein EJA96_06665 PF02753 Pili assembly chaperone PapD, C-terminal domain EJA96_06665 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EJA96_06670 PF13954 PapC N-terminal domain EJA96_06670 PF13953 PapC C-terminal domain EJA96_06670 PF00577 Outer membrane usher protein EJA96_06675 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EJA96_06675 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EJA96_06680 PF13193 AMP-binding enzyme C-terminal domain EJA96_06680 PF00501 AMP-binding enzyme EJA96_06690 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EJA96_06690 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EJA96_06695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EJA96_06695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EJA96_06700 PF00753 Metallo-beta-lactamase superfamily EJA96_06705 PF00425 chorismate binding enzyme EJA96_06705 PF04715 Anthranilate synthase component I, N terminal region EJA96_06710 PF00117 Glutamine amidotransferase class-I EJA96_06715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_06715 PF03466 LysR substrate binding domain EJA96_06720 PF02445 Quinolinate synthetase A protein EJA96_06725 PF01435 Peptidase family M48 EJA96_06730 PF01206 Sulfurtransferase TusA EJA96_06735 PF01594 AI-2E family transporter EJA96_06740 PF00578 AhpC/TSA family EJA96_06750 PF00701 Dihydrodipicolinate synthetase family EJA96_06755 PF06804 NlpB/DapX lipoprotein EJA96_06760 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EJA96_06760 PF00753 Metallo-beta-lactamase superfamily EJA96_06760 PF10996 Beta-Casp domain EJA96_06765 PF01259 SAICAR synthetase EJA96_06775 PF00535 Glycosyl transferase family 2 EJA96_06790 PF00108 Thiolase, N-terminal domain EJA96_06790 PF02803 Thiolase, C-terminal domain EJA96_06800 PF13452 N-terminal half of MaoC dehydratase EJA96_06805 PF07690 Major Facilitator Superfamily EJA96_06815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_06815 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_06815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_06820 PF00378 Enoyl-CoA hydratase/isomerase EJA96_06825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_06825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_06825 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_06830 PF00106 short chain dehydrogenase EJA96_06835 PF03060 Nitronate monooxygenase EJA96_06840 PF03573 outer membrane porin, OprD family EJA96_06855 PF00171 Aldehyde dehydrogenase family EJA96_06860 PF01266 FAD dependent oxidoreductase EJA96_06875 PF02646 RmuC family EJA96_06880 PF01804 Penicillin amidase EJA96_06885 PF00043 Glutathione S-transferase, C-terminal domain EJA96_06885 PF02798 Glutathione S-transferase, N-terminal domain EJA96_06890 PF07517 SecA DEAD-like domain EJA96_06890 PF07516 SecA Wing and Scaffold domain EJA96_06890 PF02810 SEC-C motif EJA96_06890 PF01043 SecA preprotein cross-linking domain EJA96_06905 PF03458 UPF0126 domain EJA96_06915 PF02810 SEC-C motif EJA96_06925 PF05736 OprF membrane domain EJA96_06925 PF00691 OmpA family EJA96_06945 PF06733 DEAD_2 EJA96_06945 PF13307 Helicase C-terminal domain EJA96_06950 PF02449 Beta-galactosidase EJA96_06950 PF17992 Agarase CBM like domain EJA96_06955 PF00144 Beta-lactamase EJA96_06960 PF00691 OmpA family EJA96_06960 PF00223 Photosystem I psaA/psaB protein EJA96_06965 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EJA96_06965 PF01243 Pyridoxamine 5'-phosphate oxidase EJA96_06970 PF17853 GGDEF-like domain EJA96_06970 PF13556 PucR C-terminal helix-turn-helix domain EJA96_06970 PF05651 Putative sugar diacid recognition EJA96_06975 PF02447 GntP family permease EJA96_06980 PF02595 Glycerate kinase family EJA96_06990 PF05433 Glycine zipper 2TM domain EJA96_07000 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EJA96_07005 PF00361 Proton-conducting membrane transporter EJA96_07015 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) EJA96_07030 PF00291 Pyridoxal-phosphate dependent enzyme EJA96_07050 PF04343 Protein of unknown function, DUF488 EJA96_07060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_07060 PF03466 LysR substrate binding domain EJA96_07065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_07065 PF00183 Hsp90 protein EJA96_07075 PF00005 ABC transporter EJA96_07080 PF12399 Branched-chain amino acid ATP-binding cassette transporter EJA96_07080 PF00005 ABC transporter EJA96_07085 PF02653 Branched-chain amino acid transport system / permease component EJA96_07085 PF11862 Domain of unknown function (DUF3382) EJA96_07090 PF02653 Branched-chain amino acid transport system / permease component EJA96_07095 PF13458 Periplasmic binding protein EJA96_07115 PF00460 Flagella basal body rod protein EJA96_07120 PF00460 Flagella basal body rod protein EJA96_07120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EJA96_07125 PF03963 Flagellar hook capping protein - N-terminal region EJA96_07125 PF13860 FlgD Ig-like domain EJA96_07125 PF13861 FlgD Tudor-like domain EJA96_07130 PF07559 Flagellar basal body protein FlaE EJA96_07130 PF00460 Flagella basal body rod protein EJA96_07130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EJA96_07135 PF00460 Flagella basal body rod protein EJA96_07135 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EJA96_07140 PF00460 Flagella basal body rod protein EJA96_07140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EJA96_07145 PF02107 Flagellar L-ring protein EJA96_07150 PF02119 Flagellar P-ring protein EJA96_07155 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EJA96_07155 PF10135 Rod binding protein EJA96_07160 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EJA96_07160 PF00460 Flagella basal body rod protein EJA96_07165 PF00669 Bacterial flagellin N-terminal helical region EJA96_07170 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EJA96_07180 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EJA96_07180 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EJA96_07210 PF00535 Glycosyl transferase family 2 EJA96_07215 PF00700 Bacterial flagellin C-terminal helical region EJA96_07215 PF00669 Bacterial flagellin N-terminal helical region EJA96_07225 PF02465 Flagellar hook-associated protein 2 N-terminus EJA96_07225 PF07196 Flagellin hook IN motif EJA96_07225 PF07195 Flagellar hook-associated protein 2 C-terminus EJA96_07230 PF02561 Flagellar protein FliS EJA96_07235 PF02561 Flagellar protein FliS EJA96_07245 PF00158 Sigma-54 interaction domain EJA96_07245 PF00072 Response regulator receiver domain EJA96_07245 PF02954 Bacterial regulatory protein, Fis family EJA96_07250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_07250 PF00512 His Kinase A (phospho-acceptor) domain EJA96_07250 PF00989 PAS fold EJA96_07255 PF00158 Sigma-54 interaction domain EJA96_07255 PF00072 Response regulator receiver domain EJA96_07255 PF02954 Bacterial regulatory protein, Fis family EJA96_07260 PF02049 Flagellar hook-basal body complex protein FliE EJA96_07265 PF08345 Flagellar M-ring protein C-terminal EJA96_07265 PF01514 Secretory protein of YscJ/FliF family EJA96_07270 PF01706 FliG C-terminal domain EJA96_07270 PF14842 FliG N-terminal domain EJA96_07270 PF14841 FliG middle domain EJA96_07280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EJA96_07280 PF18269 T3SS EscN ATPase C-terminal domain EJA96_07285 PF02050 Flagellar FliJ protein EJA96_07295 PF17151 Periplasmic sensor domain EJA96_07295 PF00990 Diguanylate cyclase, GGDEF domain EJA96_07305 PF12833 Helix-turn-helix domain EJA96_07305 PF02311 AraC-like ligand binding domain EJA96_07320 PF07995 Glucose / Sorbosone dehydrogenase EJA96_07325 PF09905 DNA-binding protein VF530 EJA96_07340 PF00005 ABC transporter EJA96_07340 PF00664 ABC transporter transmembrane region EJA96_07355 PF13509 S1 domain EJA96_07355 PF17783 CvfB-like winged helix domain EJA96_07370 PF00691 OmpA family EJA96_07375 PF17152 Periplasmic sensor domain EJA96_07375 PF00990 Diguanylate cyclase, GGDEF domain EJA96_07380 PF13689 YfiR/HmsC-like EJA96_07385 PF01327 Polypeptide deformylase EJA96_07400 PF13286 Phosphohydrolase-associated domain EJA96_07400 PF01966 HD domain EJA96_07405 PF02146 Sir2 family EJA96_07415 PF00248 Aldo/keto reductase family EJA96_07420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_07420 PF03466 LysR substrate binding domain EJA96_07425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EJA96_07455 PF01965 DJ-1/PfpI family EJA96_07460 PF03472 Autoinducer binding domain EJA96_07460 PF00196 Bacterial regulatory proteins, luxR family EJA96_07465 PF02801 Beta-ketoacyl synthase, C-terminal domain EJA96_07465 PF08659 KR domain EJA96_07465 PF08240 Alcohol dehydrogenase GroES-like domain EJA96_07465 PF16197 Ketoacyl-synthetase C-terminal extension EJA96_07465 PF00698 Acyl transferase domain EJA96_07465 PF00109 Beta-ketoacyl synthase, N-terminal domain EJA96_07465 PF00550 Phosphopantetheine attachment site EJA96_07465 PF14765 Polyketide synthase dehydratase EJA96_07480 PF07883 Cupin domain EJA96_07480 PF05899 Protein of unknown function (DUF861) EJA96_07485 PF03466 LysR substrate binding domain EJA96_07485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_07490 PF07702 UTRA domain EJA96_07490 PF00392 Bacterial regulatory proteins, gntR family EJA96_07505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_07505 PF03466 LysR substrate binding domain EJA96_07510 PF00465 Iron-containing alcohol dehydrogenase EJA96_07515 PF13520 Amino acid permease EJA96_07520 PF09009 Exotoxin A catalytic EJA96_07520 PF09102 Exotoxin A, targeting EJA96_07520 PF09101 Exotoxin A binding EJA96_07535 PF06958 S-type Pyocin EJA96_07535 PF06958 S-type Pyocin EJA96_07560 PF00268 Ribonucleotide reductase, small chain EJA96_07565 PF02867 Ribonucleotide reductase, barrel domain EJA96_07565 PF00317 Ribonucleotide reductase, all-alpha domain EJA96_07565 PF03477 ATP cone domain EJA96_07570 PF00072 Response regulator receiver domain EJA96_07570 PF00486 Transcriptional regulatory protein, C terminal EJA96_07575 PF00512 His Kinase A (phospho-acceptor) domain EJA96_07575 PF00672 HAMP domain EJA96_07575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_07580 PF00313 'Cold-shock' DNA-binding domain EJA96_07590 PF13847 Methyltransferase domain EJA96_07595 PF07687 Peptidase dimerisation domain EJA96_07595 PF01546 Peptidase family M20/M25/M40 EJA96_07605 PF00899 ThiF family EJA96_07610 PF01648 4'-phosphopantetheinyl transferase superfamily EJA96_07610 PF17837 4'-phosphopantetheinyl transferase N-terminal domain EJA96_07615 PF01738 Dienelactone hydrolase family EJA96_07630 PF00305 Lipoxygenase EJA96_07635 PF03741 Integral membrane protein TerC family EJA96_07640 PF13406 Transglycosylase SLT domain EJA96_07645 PF03264 NapC/NirT cytochrome c family, N-terminal region EJA96_07650 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) EJA96_07655 PF01568 Molydopterin dinucleotide binding domain EJA96_07655 PF00384 Molybdopterin oxidoreductase EJA96_07655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EJA96_07660 PF03927 NapD protein EJA96_07670 PF06796 Periplasmic nitrate reductase protein NapE EJA96_07680 PF00072 Response regulator receiver domain EJA96_07680 PF00486 Transcriptional regulatory protein, C terminal EJA96_07685 PF08918 PhoQ Sensor EJA96_07685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_07690 PF00563 EAL domain EJA96_07690 PF00990 Diguanylate cyclase, GGDEF domain EJA96_07690 PF13426 PAS domain EJA96_07690 PF05231 MASE1 EJA96_07690 PF08447 PAS fold EJA96_07690 PF08448 PAS fold EJA96_07705 PF00375 Sodium:dicarboxylate symporter family EJA96_07710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_07710 PF03466 LysR substrate binding domain EJA96_07715 PF02798 Glutathione S-transferase, N-terminal domain EJA96_07715 PF00043 Glutathione S-transferase, C-terminal domain EJA96_07720 PF00296 Luciferase-like monooxygenase EJA96_07725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_07725 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_07725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_07730 PF02515 CoA-transferase family III EJA96_07735 PF10263 SprT-like family EJA96_07735 PF17283 SprT-like zinc ribbon domain EJA96_07740 PF04893 Yip1 domain EJA96_07750 PF01171 PP-loop family EJA96_07755 PF03352 Methyladenine glycosylase EJA96_07760 PF13520 Amino acid permease EJA96_07770 PF00158 Sigma-54 interaction domain EJA96_07770 PF02954 Bacterial regulatory protein, Fis family EJA96_07770 PF13426 PAS domain EJA96_07775 PF02146 Sir2 family EJA96_07780 PF00877 NlpC/P60 family EJA96_07785 PF00877 NlpC/P60 family EJA96_07790 PF01596 O-methyltransferase EJA96_07795 PF03466 LysR substrate binding domain EJA96_07795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_07800 PF00857 Isochorismatase family EJA96_07810 PF03358 NADPH-dependent FMN reductase EJA96_07815 PF05726 Pirin C-terminal cupin domain EJA96_07815 PF02678 Pirin EJA96_07825 PF02254 TrkA-N domain EJA96_07825 PF00999 Sodium/hydrogen exchanger family EJA96_07830 PF00743 Flavin-binding monooxygenase-like EJA96_07840 PF02678 Pirin EJA96_07840 PF17954 Quercetinase C-terminal cupin domain EJA96_07850 PF07690 Major Facilitator Superfamily EJA96_07865 PF13193 AMP-binding enzyme C-terminal domain EJA96_07865 PF00501 AMP-binding enzyme EJA96_07875 PF00682 HMGL-like EJA96_07895 PF13193 AMP-binding enzyme C-terminal domain EJA96_07895 PF00668 Condensation domain EJA96_07895 PF00550 Phosphopantetheine attachment site EJA96_07895 PF00501 AMP-binding enzyme EJA96_07900 PF06725 3D domain EJA96_07900 PF03562 MltA specific insert domain EJA96_07910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_07910 PF03466 LysR substrate binding domain EJA96_07920 PF00795 Carbon-nitrogen hydrolase EJA96_07925 PF13416 Bacterial extracellular solute-binding protein EJA96_07930 PF04371 Porphyromonas-type peptidyl-arginine deiminase EJA96_07935 PF02525 Flavodoxin-like fold EJA96_07955 PF02311 AraC-like ligand binding domain EJA96_07955 PF12833 Helix-turn-helix domain EJA96_07965 PF13533 Biotin-lipoyl like EJA96_07985 PF12833 Helix-turn-helix domain EJA96_07985 PF02311 AraC-like ligand binding domain EJA96_07990 PF07690 Major Facilitator Superfamily EJA96_08010 PF00378 Enoyl-CoA hydratase/isomerase EJA96_08025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_08025 PF00072 Response regulator receiver domain EJA96_08025 PF13426 PAS domain EJA96_08045 PF00529 HlyD membrane-fusion protein of T1SS EJA96_08050 PF02321 Outer membrane efflux protein EJA96_08065 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) EJA96_08065 PF08548 Peptidase M10 serralysin C terminal EJA96_08070 PF02974 Protease inhibitor Inh EJA96_08075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_08075 PF00672 HAMP domain EJA96_08075 PF12729 Four helix bundle sensory module for signal transduction EJA96_08080 PF02615 Malate/L-lactate dehydrogenase EJA96_08090 PF00701 Dihydrodipicolinate synthetase family EJA96_08095 PF05544 Proline racemase EJA96_08100 PF00005 ABC transporter EJA96_08110 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_08120 PF00497 Bacterial extracellular solute-binding proteins, family 3 EJA96_08130 PF07690 Major Facilitator Superfamily EJA96_08165 PF01266 FAD dependent oxidoreductase EJA96_08170 PF05544 Proline racemase EJA96_08175 PF07729 FCD domain EJA96_08175 PF00392 Bacterial regulatory proteins, gntR family EJA96_08185 PF00593 TonB dependent receptor EJA96_08185 PF07715 TonB-dependent Receptor Plug Domain EJA96_08190 PF12557 Cob(I)alamin adenosyltransferase N terminal EJA96_08190 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EJA96_08195 PF07685 CobB/CobQ-like glutamine amidotransferase domain EJA96_08195 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EJA96_08200 PF00881 Nitroreductase family EJA96_08210 PF00155 Aminotransferase class I and II EJA96_08220 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase EJA96_08225 PF02277 Phosphoribosyltransferase EJA96_08235 PF02654 Cobalamin-5-phosphate synthase EJA96_08240 PF07690 Major Facilitator Superfamily EJA96_08250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_08250 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_08250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_08250 PF12806 Acetyl-CoA dehydrogenase C-terminal like EJA96_08265 PF00255 Glutathione peroxidase EJA96_08270 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) EJA96_08280 PF00440 Bacterial regulatory proteins, tetR family EJA96_08290 PF00581 Rhodanese-like domain EJA96_08305 PF05166 YcgL domain EJA96_08310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EJA96_08315 PF01545 Cation efflux family EJA96_08320 PF02583 Metal-sensitive transcriptional repressor EJA96_08325 PF03692 Putative zinc- or iron-chelating domain EJA96_08330 PF04542 Sigma-70 region 2 EJA96_08330 PF08281 Sigma-70, region 4 EJA96_08335 PF04773 FecR protein EJA96_08335 PF16220 Domain of unknown function (DUF4880) EJA96_08340 PF00593 TonB dependent receptor EJA96_08340 PF07715 TonB-dependent Receptor Plug Domain EJA96_08345 PF10502 Signal peptidase, peptidase S26 EJA96_08350 PF00326 Prolyl oligopeptidase family EJA96_08350 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EJA96_08365 PF13230 Glutamine amidotransferases class-II EJA96_08375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_08375 PF03466 LysR substrate binding domain EJA96_08380 PF00266 Aminotransferase class-V EJA96_08390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_08390 PF03466 LysR substrate binding domain EJA96_08405 PF08361 MAATS-type transcriptional repressor, C-terminal region EJA96_08405 PF00440 Bacterial regulatory proteins, tetR family EJA96_08410 PF07690 Major Facilitator Superfamily EJA96_08420 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EJA96_08420 PF06481 COX Aromatic Rich Motif EJA96_08425 PF00115 Cytochrome C and Quinol oxidase polypeptide I EJA96_08430 PF00510 Cytochrome c oxidase subunit III EJA96_08435 PF03626 Prokaryotic Cytochrome C oxidase subunit IV EJA96_08440 PF01040 UbiA prenyltransferase family EJA96_08445 PF07715 TonB-dependent Receptor Plug Domain EJA96_08445 PF00593 TonB dependent receptor EJA96_08460 PF13474 SnoaL-like domain EJA96_08465 PF00291 Pyridoxal-phosphate dependent enzyme EJA96_08465 PF00585 C-terminal regulatory domain of Threonine dehydratase EJA96_08470 PF01223 DNA/RNA non-specific endonuclease EJA96_08475 PF03466 LysR substrate binding domain EJA96_08475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_08485 PF00106 short chain dehydrogenase EJA96_08490 PF03471 Transporter associated domain EJA96_08490 PF03741 Integral membrane protein TerC family EJA96_08490 PF00571 CBS domain EJA96_08515 PF02954 Bacterial regulatory protein, Fis family EJA96_08515 PF00072 Response regulator receiver domain EJA96_08515 PF00158 Sigma-54 interaction domain EJA96_08520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_08520 PF00512 His Kinase A (phospho-acceptor) domain EJA96_08520 PF02743 Cache domain EJA96_08525 PF17763 Glutaminase/Asparaginase C-terminal domain EJA96_08525 PF00710 Asparaginase, N-terminal EJA96_08535 PF00005 ABC transporter EJA96_08540 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_08545 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_08550 PF00497 Bacterial extracellular solute-binding proteins, family 3 EJA96_08560 PF00106 short chain dehydrogenase EJA96_08565 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EJA96_08565 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EJA96_08575 PF00196 Bacterial regulatory proteins, luxR family EJA96_08575 PF00072 Response regulator receiver domain EJA96_08585 PF03795 YCII-related domain EJA96_08600 PF07690 Major Facilitator Superfamily EJA96_08610 PF03795 YCII-related domain EJA96_08625 PF04073 Aminoacyl-tRNA editing domain EJA96_08640 PF00892 EamA-like transporter family EJA96_08665 PF07715 TonB-dependent Receptor Plug Domain EJA96_08665 PF00593 TonB dependent receptor EJA96_08670 PF02567 Phenazine biosynthesis-like protein EJA96_08690 PF01638 HxlR-like helix-turn-helix EJA96_08695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EJA96_08695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EJA96_08695 PF11890 Domain of unknown function (DUF3410) EJA96_08700 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) EJA96_08705 PF00583 Acetyltransferase (GNAT) family EJA96_08715 PF00106 short chain dehydrogenase EJA96_08720 PF12833 Helix-turn-helix domain EJA96_08720 PF06719 AraC-type transcriptional regulator N-terminus EJA96_08730 PF03958 Bacterial type II/III secretion system short domain EJA96_08730 PF00263 Bacterial type II and III secretion system protein EJA96_08740 PF16363 GDP-mannose 4,6 dehydratase EJA96_08750 PF00005 ABC transporter EJA96_08765 PF00534 Glycosyl transferases group 1 EJA96_08770 PF00535 Glycosyl transferase family 2 EJA96_08775 PF13439 Glycosyltransferase Family 4 EJA96_08775 PF00534 Glycosyl transferases group 1 EJA96_08800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_08800 PF00512 His Kinase A (phospho-acceptor) domain EJA96_08800 PF00072 Response regulator receiver domain EJA96_08800 PF01627 Hpt domain EJA96_08805 PF00196 Bacterial regulatory proteins, luxR family EJA96_08805 PF00072 Response regulator receiver domain EJA96_08815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_08815 PF03466 LysR substrate binding domain EJA96_08820 PF02785 Biotin carboxylase C-terminal domain EJA96_08820 PF00289 Biotin carboxylase, N-terminal domain EJA96_08820 PF00364 Biotin-requiring enzyme EJA96_08820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EJA96_08820 PF00682 HMGL-like EJA96_08820 PF02436 Conserved carboxylase domain EJA96_08835 PF00440 Bacterial regulatory proteins, tetR family EJA96_08855 PF01170 Putative RNA methylase family UPF0020 EJA96_08855 PF10672 S-adenosylmethionine-dependent methyltransferase EJA96_08855 PF02926 THUMP domain EJA96_08870 PF00850 Histone deacetylase domain EJA96_08875 PF13416 Bacterial extracellular solute-binding protein EJA96_08880 PF00892 EamA-like transporter family EJA96_08890 PF03466 LysR substrate binding domain EJA96_08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_08905 PF01565 FAD binding domain EJA96_08905 PF02913 FAD linked oxidases, C-terminal domain EJA96_08915 PF00474 Sodium:solute symporter family EJA96_08930 PF00491 Arginase family EJA96_08935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_08935 PF03466 LysR substrate binding domain EJA96_08940 PF08447 PAS fold EJA96_08940 PF13426 PAS domain EJA96_08940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_08965 PF13673 Acetyltransferase (GNAT) domain EJA96_08970 PF00689 Cation transporting ATPase, C-terminus EJA96_08970 PF00690 Cation transporter/ATPase, N-terminus EJA96_08975 PF00196 Bacterial regulatory proteins, luxR family EJA96_08975 PF03472 Autoinducer binding domain EJA96_08985 PF00765 Autoinducer synthase EJA96_08990 PF13188 PAS domain EJA96_08990 PF00990 Diguanylate cyclase, GGDEF domain EJA96_08990 PF03707 Bacterial signalling protein N terminal repeat EJA96_08990 PF00563 EAL domain EJA96_09000 PF13533 Biotin-lipoyl like EJA96_09005 PF00873 AcrB/AcrD/AcrF family EJA96_09010 PF00072 Response regulator receiver domain EJA96_09010 PF00486 Transcriptional regulatory protein, C terminal EJA96_09015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_09015 PF00512 His Kinase A (phospho-acceptor) domain EJA96_09015 PF00672 HAMP domain EJA96_09020 PF04304 Protein of unknown function (DUF454) EJA96_09040 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EJA96_09040 PF02154 Flagellar motor switch protein FliM EJA96_09045 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EJA96_09055 PF00813 FliP family EJA96_09060 PF01313 Bacterial export proteins, family 3 EJA96_09065 PF01311 Bacterial export proteins, family 1 EJA96_09070 PF01312 FlhB HrpN YscU SpaS Family EJA96_09080 PF04536 TPM domain EJA96_09085 PF00771 FHIPEP family EJA96_09090 PF00448 SRP54-type protein, GTPase domain EJA96_09095 PF10609 NUBPL iron-transfer P-loop NTPase EJA96_09100 PF04542 Sigma-70 region 2 EJA96_09100 PF04545 Sigma-70, region 4 EJA96_09100 PF04539 Sigma-70 region 3 EJA96_09105 PF00072 Response regulator receiver domain EJA96_09110 PF04344 Chemotaxis phosphatase, CheZ EJA96_09120 PF01339 CheB methylesterase EJA96_09120 PF00072 Response regulator receiver domain EJA96_09125 PF01618 MotA/TolQ/ExbB proton channel family EJA96_09130 PF00691 OmpA family EJA96_09130 PF13677 Membrane MotB of proton-channel complex MotA/MotB EJA96_09135 PF13614 AAA domain EJA96_09145 PF01584 CheW-like domain EJA96_09185 PF01312 FlhB HrpN YscU SpaS Family EJA96_09195 PF00005 ABC transporter EJA96_09200 PF03379 CcmB protein EJA96_09205 PF01578 Cytochrome C assembly protein EJA96_09210 PF04995 Heme exporter protein D (CcmD) EJA96_09215 PF03100 CcmE EJA96_09220 PF01578 Cytochrome C assembly protein EJA96_09220 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EJA96_09225 PF08534 Redoxin EJA96_09230 PF03918 Cytochrome C biogenesis protein EJA96_09245 PF00072 Response regulator receiver domain EJA96_09245 PF00196 Bacterial regulatory proteins, luxR family EJA96_09260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EJA96_09260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EJA96_09270 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_09270 PF04324 BFD-like [2Fe-2S] binding domain EJA96_09275 PF00455 DeoR C terminal sensor domain EJA96_09275 PF08220 DeoR-like helix-turn-helix domain EJA96_09280 PF04346 Ethanolamine utilisation protein, EutH EJA96_09305 PF00027 Cyclic nucleotide-binding domain EJA96_09305 PF00520 Ion transport protein EJA96_09315 PF02887 Pyruvate kinase, alpha/beta domain EJA96_09315 PF00224 Pyruvate kinase, barrel domain EJA96_09320 PF05161 MOFRL family EJA96_09320 PF13660 Domain of unknown function (DUF4147) EJA96_09325 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EJA96_09325 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EJA96_09330 PF01261 Xylose isomerase-like TIM barrel EJA96_09335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EJA96_09335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EJA96_09335 PF00205 Thiamine pyrophosphate enzyme, central domain EJA96_09345 PF08362 YcdC-like protein, C-terminal region EJA96_09345 PF00440 Bacterial regulatory proteins, tetR family EJA96_09350 PF06463 Molybdenum Cofactor Synthesis C EJA96_09350 PF04055 Radical SAM superfamily EJA96_09360 PF00860 Permease family EJA96_09380 PF04717 Type VI secretion system, phage-baseplate injector EJA96_09385 PF05638 Type VI secretion system effector, Hcp EJA96_09395 PF04115 Ureidoglycolate lyase EJA96_09400 PF03561 Allantoicase repeat EJA96_09410 PF01522 Polysaccharide deacetylase EJA96_09415 PF00576 HIUase/Transthyretin family EJA96_09420 PF00860 Permease family EJA96_09435 PF01979 Amidohydrolase family EJA96_09445 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EJA96_09445 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EJA96_09450 PF01799 [2Fe-2S] binding domain EJA96_09450 PF00111 2Fe-2S iron-sulfur cluster binding domain EJA96_09455 PF00487 Fatty acid desaturase EJA96_09470 PF04354 ZipA, C-terminal FtsZ-binding domain EJA96_09475 PF00533 BRCA1 C Terminus (BRCT) domain EJA96_09475 PF01653 NAD-dependent DNA ligase adenylation domain EJA96_09475 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EJA96_09475 PF12826 Helix-hairpin-helix motif EJA96_09475 PF03120 NAD-dependent DNA ligase OB-fold domain EJA96_09500 PF02575 YbaB/EbfC DNA-binding family EJA96_09505 PF13662 Toprim domain EJA96_09505 PF02132 RecR protein EJA96_09510 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_09510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_09510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_09515 PF03691 Uncharacterised protein family (UPF0167) EJA96_09520 PF00106 short chain dehydrogenase EJA96_09525 PF00743 Flavin-binding monooxygenase-like EJA96_09535 PF00893 Small Multidrug Resistance protein EJA96_09540 PF00893 Small Multidrug Resistance protein EJA96_09550 PF00156 Phosphoribosyl transferase domain EJA96_09555 PF00325 Bacterial regulatory proteins, crp family EJA96_09555 PF00027 Cyclic nucleotide-binding domain EJA96_09565 PF04055 Radical SAM superfamily EJA96_09565 PF06969 HemN C-terminal domain EJA96_09590 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EJA96_09590 PF12801 4Fe-4S binding domain EJA96_09590 PF13746 4Fe-4S dicluster domain EJA96_09600 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EJA96_09600 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EJA96_09615 PF00115 Cytochrome C and Quinol oxidase polypeptide I EJA96_09620 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EJA96_09620 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EJA96_09635 PF00115 Cytochrome C and Quinol oxidase polypeptide I EJA96_09650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_09650 PF08447 PAS fold EJA96_09655 PF00694 Aconitase C-terminal domain EJA96_09655 PF00330 Aconitase family (aconitate hydratase) EJA96_09660 PF18125 RlmM ferredoxin-like domain EJA96_09660 PF01728 FtsJ-like methyltransferase EJA96_09665 PF01206 Sulfurtransferase TusA EJA96_09670 PF01266 FAD dependent oxidoreductase EJA96_09675 PF00120 Glutamine synthetase, catalytic domain EJA96_09685 PF01266 FAD dependent oxidoreductase EJA96_09690 PF01042 Endoribonuclease L-PSP EJA96_09705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_09705 PF03466 LysR substrate binding domain EJA96_09720 PF06940 Domain of unknown function (DUF1287) EJA96_09725 PF06865 Pyrimidine/purine nucleoside phosphorylase EJA96_09750 PF03692 Putative zinc- or iron-chelating domain EJA96_09755 PF01852 START domain EJA96_09765 PF17761 DUF1016 N-terminal domain EJA96_09765 PF06250 YhcG PDDEXK nuclease domain EJA96_09770 PF04002 RadC-like JAB domain EJA96_09780 PF06067 Domain of unknown function (DUF932) EJA96_09805 PF05284 Protein of unknown function (DUF736) EJA96_09840 PF13614 AAA domain EJA96_09880 PF00005 ABC transporter EJA96_09885 PF02405 Permease MlaE EJA96_09900 PF00873 AcrB/AcrD/AcrF family EJA96_09910 PF00440 Bacterial regulatory proteins, tetR family EJA96_09910 PF08360 QacR-like protein, C-terminal region EJA96_09920 PF03466 LysR substrate binding domain EJA96_09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_09930 PF00893 Small Multidrug Resistance protein EJA96_09945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_09945 PF03466 LysR substrate binding domain EJA96_09950 PF02534 Type IV secretory system Conjugative DNA transfer EJA96_09960 PF00437 Type II/IV secretion system protein EJA96_09965 PF04956 TrbC/VIRB2 family EJA96_09975 PF03135 CagE, TrbE, VirB family, component of type IV transporter system EJA96_10000 PF03524 Conjugal transfer protein EJA96_10005 PF03743 Bacterial conjugation TrbI-like protein EJA96_10015 PF00285 Citrate synthase, C-terminal domain EJA96_10020 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EJA96_10025 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EJA96_10030 PF00890 FAD binding domain EJA96_10030 PF02910 Fumarate reductase flavoprotein C-term EJA96_10035 PF13085 2Fe-2S iron-sulfur cluster binding domain EJA96_10040 PF16078 2-oxoglutarate dehydrogenase N-terminus EJA96_10040 PF00676 Dehydrogenase E1 component EJA96_10040 PF16870 2-oxoglutarate dehydrogenase C-terminal EJA96_10040 PF02779 Transketolase, pyrimidine binding domain EJA96_10045 PF02817 e3 binding domain EJA96_10045 PF00364 Biotin-requiring enzyme EJA96_10045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EJA96_10050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EJA96_10050 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_10055 PF08442 ATP-grasp domain EJA96_10055 PF00549 CoA-ligase EJA96_10060 PF02629 CoA binding domain EJA96_10060 PF00549 CoA-ligase EJA96_10065 PF05525 Branched-chain amino acid transport protein EJA96_10095 PF00183 Hsp90 protein EJA96_10095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_10105 PF02548 Ketopantoate hydroxymethyltransferase EJA96_10110 PF12833 Helix-turn-helix domain EJA96_10110 PF02311 AraC-like ligand binding domain EJA96_10120 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EJA96_10120 PF00034 Cytochrome c EJA96_10120 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EJA96_10130 PF12802 MarR family EJA96_10150 PF01638 HxlR-like helix-turn-helix EJA96_10155 PF00672 HAMP domain EJA96_10155 PF12729 Four helix bundle sensory module for signal transduction EJA96_10155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_10160 PF00109 Beta-ketoacyl synthase, N-terminal domain EJA96_10160 PF02801 Beta-ketoacyl synthase, C-terminal domain EJA96_10165 PF07977 FabA-like domain EJA96_10170 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EJA96_10170 PF00672 HAMP domain EJA96_10170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_10170 PF00512 His Kinase A (phospho-acceptor) domain EJA96_10170 PF01627 Hpt domain EJA96_10170 PF00072 Response regulator receiver domain EJA96_10180 PF07715 TonB-dependent Receptor Plug Domain EJA96_10180 PF00593 TonB dependent receptor EJA96_10185 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EJA96_10185 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EJA96_10200 PF00501 AMP-binding enzyme EJA96_10205 PF03061 Thioesterase superfamily EJA96_10230 PF00043 Glutathione S-transferase, C-terminal domain EJA96_10230 PF02798 Glutathione S-transferase, N-terminal domain EJA96_10240 PF01594 AI-2E family transporter EJA96_10245 PF07690 Major Facilitator Superfamily EJA96_10250 PF00392 Bacterial regulatory proteins, gntR family EJA96_10250 PF07729 FCD domain EJA96_10260 PF00378 Enoyl-CoA hydratase/isomerase EJA96_10265 PF09339 IclR helix-turn-helix domain EJA96_10270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_10270 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_10270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_10280 PF03814 Potassium-transporting ATPase A subunit EJA96_10300 PF00486 Transcriptional regulatory protein, C terminal EJA96_10300 PF00072 Response regulator receiver domain EJA96_10305 PF04960 Glutaminase EJA96_10315 PF01734 Patatin-like phospholipase EJA96_10325 PF02769 AIR synthase related protein, C-terminal domain EJA96_10325 PF00586 AIR synthase related protein, N-terminal domain EJA96_10340 PF01613 Flavin reductase like domain EJA96_10350 PF16591 Helical bimodular sensor domain EJA96_10350 PF00672 HAMP domain EJA96_10350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_10355 PF00916 Sulfate permease family EJA96_10355 PF01740 STAS domain EJA96_10365 PF00107 Zinc-binding dehydrogenase EJA96_10365 PF16884 N-terminal domain of oxidoreductase EJA96_10380 PF03594 Benzoate membrane transport protein EJA96_10395 PF00155 Aminotransferase class I and II EJA96_10400 PF02798 Glutathione S-transferase, N-terminal domain EJA96_10410 PF05593 RHS Repeat EJA96_10410 PF03527 RHS protein EJA96_10425 PF05638 Type VI secretion system effector, Hcp EJA96_10465 PF10431 C-terminal, D2-small domain, of ClpB protein EJA96_10465 PF17871 AAA lid domain EJA96_10465 PF07724 AAA domain (Cdc48 subfamily) EJA96_10465 PF00004 ATPase family associated with various cellular activities (AAA) EJA96_10470 PF00072 Response regulator receiver domain EJA96_10470 PF02954 Bacterial regulatory protein, Fis family EJA96_10470 PF00158 Sigma-54 interaction domain EJA96_10520 PF01814 Hemerythrin HHE cation binding domain EJA96_10525 PF01227 GTP cyclohydrolase I EJA96_10530 PF01713 Smr domain EJA96_10545 PF05175 Methyltransferase small domain EJA96_10560 PF01264 Chorismate synthase EJA96_10570 PF00596 Class II Aldolase and Adducin N-terminal domain EJA96_10575 PF03079 ARD/ARD' family EJA96_10595 PF17284 Spermidine synthase tetramerisation domain EJA96_10610 PF01312 FlhB HrpN YscU SpaS Family EJA96_10615 PF01311 Bacterial export proteins, family 1 EJA96_10620 PF01313 Bacterial export proteins, family 3 EJA96_10625 PF00813 FliP family EJA96_10655 PF07201 HrpJ-like domain EJA96_10660 PF09059 TyeA EJA96_10680 PF00771 FHIPEP family EJA96_10685 PF09621 Type III secretion system regulator (LcrR) EJA96_10695 PF04792 V antigen (LcrV) protein EJA96_10700 PF07720 Tetratricopeptide repeat EJA96_10715 PF05932 Tir chaperone protein (CesT) family EJA96_10725 PF09619 Type III secretion system lipoprotein chaperone (YscW) EJA96_10730 PF12833 Helix-turn-helix domain EJA96_10740 PF05932 Tir chaperone protein (CesT) family EJA96_10755 PF08988 Type III secretion system, cytoplasmic E component of needle EJA96_10760 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF EJA96_10765 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) EJA96_10775 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI EJA96_10780 PF01514 Secretory protein of YscJ/FliF family EJA96_10785 PF06578 YOP proteins translocation protein K (YscK) EJA96_10790 PF02108 Flagellar assembly protein FliH EJA96_10795 PF01915 Glycosyl hydrolase family 3 C-terminal domain EJA96_10795 PF00933 Glycosyl hydrolase family 3 N terminal domain EJA96_10795 PF14310 Fibronectin type III-like domain EJA96_10800 PF00990 Diguanylate cyclase, GGDEF domain EJA96_10800 PF03707 Bacterial signalling protein N terminal repeat EJA96_10800 PF00563 EAL domain EJA96_10820 PF14403 Circularly permuted ATP-grasp type 2 EJA96_10825 PF14403 Circularly permuted ATP-grasp type 2 EJA96_10825 PF04168 A predicted alpha-helical domain with a conserved ER motif. EJA96_10830 PF01841 Transglutaminase-like superfamily EJA96_10830 PF08379 Bacterial transglutaminase-like N-terminal region EJA96_10850 PF02803 Thiolase, C-terminal domain EJA96_10850 PF00108 Thiolase, N-terminal domain EJA96_10855 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EJA96_10855 PF00378 Enoyl-CoA hydratase/isomerase EJA96_10855 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EJA96_10860 PF03466 LysR substrate binding domain EJA96_10860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_10865 PF00248 Aldo/keto reductase family EJA96_10880 PF00117 Glutamine amidotransferase class-I EJA96_10880 PF02540 NAD synthase EJA96_10880 PF00958 GMP synthase C terminal domain EJA96_10920 PF00793 DAHP synthetase I family EJA96_10935 PF08546 Ketopantoate reductase PanE/ApbA C terminal EJA96_10935 PF02558 Ketopantoate reductase PanE/ApbA EJA96_10945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_10945 PF03466 LysR substrate binding domain EJA96_10955 PF01507 Phosphoadenosine phosphosulfate reductase family EJA96_10965 PF00425 chorismate binding enzyme EJA96_10965 PF04715 Anthranilate synthase component I, N terminal region EJA96_10970 PF00196 Bacterial regulatory proteins, luxR family EJA96_10970 PF17874 MalT-like TPR region EJA96_10975 PF17874 MalT-like TPR region EJA96_10975 PF00196 Bacterial regulatory proteins, luxR family EJA96_11020 PF18030 RimK PreATP-grasp domain EJA96_11020 PF08443 RimK-like ATP-grasp domain EJA96_11025 PF03618 Kinase/pyrophosphorylase EJA96_11035 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EJA96_11035 PF02896 PEP-utilising enzyme, TIM barrel domain EJA96_11035 PF00391 PEP-utilising enzyme, mobile domain EJA96_11045 PF03737 Aldolase/RraA EJA96_11050 PF01544 CorA-like Mg2+ transporter protein EJA96_11060 PF05552 Conserved TM helix EJA96_11070 PF00691 OmpA family EJA96_11070 PF05736 OprF membrane domain EJA96_11075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EJA96_11080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EJA96_11080 PF01568 Molydopterin dinucleotide binding domain EJA96_11080 PF04324 BFD-like [2Fe-2S] binding domain EJA96_11080 PF00384 Molybdopterin oxidoreductase EJA96_11085 PF00355 Rieske [2Fe-2S] domain EJA96_11090 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_11090 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EJA96_11090 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EJA96_11090 PF04324 BFD-like [2Fe-2S] binding domain EJA96_11090 PF18267 Rubredoxin NAD+ reductase C-terminal domain EJA96_11095 PF00069 Protein kinase domain EJA96_11095 PF03793 PASTA domain EJA96_11100 PF07690 Major Facilitator Superfamily EJA96_11110 PF01339 CheB methylesterase EJA96_11110 PF00072 Response regulator receiver domain EJA96_11120 PF11791 Aconitate B N-terminal domain EJA96_11120 PF06434 Aconitate hydratase 2 N-terminus EJA96_11120 PF00330 Aconitase family (aconitate hydratase) EJA96_11135 PF00582 Universal stress protein family EJA96_11140 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) EJA96_11150 PF00149 Calcineurin-like phosphoesterase EJA96_11155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EJA96_11160 PF00749 tRNA synthetases class I (E and Q), catalytic domain EJA96_11160 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EJA96_11165 PF09190 DALR domain EJA96_11165 PF01406 tRNA synthetases class I (C) catalytic domain EJA96_11170 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EJA96_11170 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EJA96_11200 PF00144 Beta-lactamase EJA96_11205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_11205 PF00512 His Kinase A (phospho-acceptor) domain EJA96_11205 PF00672 HAMP domain EJA96_11210 PF00486 Transcriptional regulatory protein, C terminal EJA96_11210 PF00072 Response regulator receiver domain EJA96_11220 PF05697 Bacterial trigger factor protein (TF) EJA96_11220 PF05698 Bacterial trigger factor protein (TF) C-terminus EJA96_11220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EJA96_11225 PF00574 Clp protease EJA96_11230 PF06689 ClpX C4-type zinc finger EJA96_11230 PF10431 C-terminal, D2-small domain, of ClpB protein EJA96_11230 PF07724 AAA domain (Cdc48 subfamily) EJA96_11235 PF05362 Lon protease (S16) C-terminal proteolytic domain EJA96_11235 PF02190 ATP-dependent protease La (LON) substrate-binding domain EJA96_11235 PF00004 ATPase family associated with various cellular activities (AAA) EJA96_11240 PF00216 Bacterial DNA-binding protein EJA96_11250 PF05698 Bacterial trigger factor protein (TF) C-terminus EJA96_11260 PF00005 ABC transporter EJA96_11260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EJA96_11265 PF12911 N-terminal TM domain of oligopeptide transport permease C EJA96_11265 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_11270 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_11275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EJA96_11280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EJA96_11285 PF01476 LysM domain EJA96_11285 PF01464 Transglycosylase SLT domain EJA96_11290 PF16123 Hydroxyacylglutathione hydrolase C-terminus EJA96_11290 PF00753 Metallo-beta-lactamase superfamily EJA96_11300 PF00075 RNase H EJA96_11305 PF00929 Exonuclease EJA96_11315 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain EJA96_11315 PF01276 Orn/Lys/Arg decarboxylase, major domain EJA96_11315 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain EJA96_11320 PF13520 Amino acid permease EJA96_11325 PF06450 Bacterial Na+/H+ antiporter B (NhaB) EJA96_11330 PF00378 Enoyl-CoA hydratase/isomerase EJA96_11340 PF00293 NUDIX domain EJA96_11340 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain EJA96_11340 PF09297 NADH pyrophosphatase zinc ribbon domain EJA96_11345 PF01925 Sulfite exporter TauE/SafE EJA96_11350 PF00565 Staphylococcal nuclease homologue EJA96_11355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_11355 PF03466 LysR substrate binding domain EJA96_11385 PF08496 Peptidase family S49 N-terminal EJA96_11385 PF01343 Peptidase family S49 EJA96_11390 PF00107 Zinc-binding dehydrogenase EJA96_11390 PF08240 Alcohol dehydrogenase GroES-like domain EJA96_11415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EJA96_11415 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EJA96_11430 PF04055 Radical SAM superfamily EJA96_11450 PF02607 B12 binding domain EJA96_11450 PF02965 Vitamin B12 dependent methionine synthase, activation domain EJA96_11450 PF00809 Pterin binding enzyme EJA96_11450 PF02574 Homocysteine S-methyltransferase EJA96_11450 PF02310 B12 binding domain EJA96_11470 PF01521 Iron-sulphur cluster biosynthesis EJA96_11470 PF01106 NifU-like domain EJA96_11480 PF06906 Protein of unknown function (DUF1272) EJA96_11485 PF01965 DJ-1/PfpI family EJA96_11485 PF12833 Helix-turn-helix domain EJA96_11490 PF00360 Phytochrome region EJA96_11490 PF00990 Diguanylate cyclase, GGDEF domain EJA96_11490 PF01590 GAF domain EJA96_11490 PF00563 EAL domain EJA96_11500 PF03466 LysR substrate binding domain EJA96_11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_11505 PF03448 MgtE intracellular N domain EJA96_11505 PF01769 Divalent cation transporter EJA96_11505 PF00571 CBS domain EJA96_11515 PF00115 Cytochrome C and Quinol oxidase polypeptide I EJA96_11520 PF05661 Protein of unknown function (DUF808) EJA96_11525 PF02386 Cation transport protein EJA96_11530 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase EJA96_11535 PF03466 LysR substrate binding domain EJA96_11535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_11540 PF04072 Leucine carboxyl methyltransferase EJA96_11545 PF00005 ABC transporter EJA96_11545 PF03459 TOBE domain EJA96_11550 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_11560 PF00440 Bacterial regulatory proteins, tetR family EJA96_11560 PF08361 MAATS-type transcriptional repressor, C-terminal region EJA96_11565 PF18081 Fanconi anemia-associated nuclease SAP domain EJA96_11565 PF08774 VRR-NUC domain EJA96_11585 PF00263 Bacterial type II and III secretion system protein EJA96_11585 PF03958 Bacterial type II/III secretion system short domain EJA96_11590 PF00550 Phosphopantetheine attachment site EJA96_11625 PF00664 ABC transporter transmembrane region EJA96_11625 PF00005 ABC transporter EJA96_11625 PF03412 Peptidase C39 family EJA96_11630 PF00529 HlyD membrane-fusion protein of T1SS EJA96_11630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EJA96_11645 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EJA96_11650 PF01799 [2Fe-2S] binding domain EJA96_11650 PF00111 2Fe-2S iron-sulfur cluster binding domain EJA96_11655 PF00893 Small Multidrug Resistance protein EJA96_11660 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EJA96_11675 PF03104 DNA polymerase family B, exonuclease domain EJA96_11675 PF00136 DNA polymerase family B EJA96_11695 PF13417 Glutathione S-transferase, N-terminal domain EJA96_11695 PF00043 Glutathione S-transferase, C-terminal domain EJA96_11710 PF01804 Penicillin amidase EJA96_11735 PF00196 Bacterial regulatory proteins, luxR family EJA96_11735 PF03472 Autoinducer binding domain EJA96_11740 PF03284 Phenazine biosynthesis protein A/B EJA96_11745 PF03284 Phenazine biosynthesis protein A/B EJA96_11755 PF00857 Isochorismatase family EJA96_11765 PF02567 Phenazine biosynthesis-like protein EJA96_11770 PF01243 Pyridoxamine 5'-phosphate oxidase EJA96_11770 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EJA96_11795 PF03929 PepSY-associated TM region EJA96_11810 PF08281 Sigma-70, region 4 EJA96_11810 PF04542 Sigma-70 region 2 EJA96_11830 PF07905 Purine catabolism regulatory protein-like family EJA96_11830 PF13556 PucR C-terminal helix-turn-helix domain EJA96_11845 PF01266 FAD dependent oxidoreductase EJA96_11860 PF02867 Ribonucleotide reductase, barrel domain EJA96_11860 PF03477 ATP cone domain EJA96_11860 PF00317 Ribonucleotide reductase, all-alpha domain EJA96_11890 PF18381 YcaO cyclodehydratase C-terminal domain EJA96_11890 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding EJA96_11895 PF01717 Cobalamin-independent synthase, Catalytic domain EJA96_11895 PF08267 Cobalamin-independent synthase, N-terminal domain EJA96_11900 PF13302 Acetyltransferase (GNAT) domain EJA96_11910 PF13426 PAS domain EJA96_11910 PF08447 PAS fold EJA96_11910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_11915 PF10518 TAT (twin-arginine translocation) pathway signal sequence EJA96_11915 PF00111 2Fe-2S iron-sulfur cluster binding domain EJA96_11915 PF01799 [2Fe-2S] binding domain EJA96_11920 PF03450 CO dehydrogenase flavoprotein C-terminal domain EJA96_11920 PF00941 FAD binding domain in molybdopterin dehydrogenase EJA96_11925 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EJA96_11925 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain EJA96_11945 PF00199 Catalase EJA96_11970 PF00158 Sigma-54 interaction domain EJA96_11970 PF00072 Response regulator receiver domain EJA96_11970 PF02954 Bacterial regulatory protein, Fis family EJA96_11975 PF13407 Periplasmic binding protein domain EJA96_11985 PF02653 Branched-chain amino acid transport system / permease component EJA96_11990 PF00356 Bacterial regulatory proteins, lacI family EJA96_12040 PF02673 Bacitracin resistance protein BacA EJA96_12045 PF00313 'Cold-shock' DNA-binding domain EJA96_12050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_12050 PF03466 LysR substrate binding domain EJA96_12055 PF02525 Flavodoxin-like fold EJA96_12065 PF00005 ABC transporter EJA96_12065 PF12848 ABC transporter EJA96_12105 PF05525 Branched-chain amino acid transport protein EJA96_12110 PF08019 Phosphoethanolamine transferase EptA/EptB EJA96_12110 PF00884 Sulfatase EJA96_12140 PF00072 Response regulator receiver domain EJA96_12140 PF00196 Bacterial regulatory proteins, luxR family EJA96_12170 PF00171 Aldehyde dehydrogenase family EJA96_12175 PF08042 PqqA family EJA96_12180 PF12706 Beta-lactamase superfamily domain EJA96_12185 PF03070 TENA/THI-4/PQQC family EJA96_12190 PF05402 Coenzyme PQQ synthesis protein D (PqqD) EJA96_12195 PF04055 Radical SAM superfamily EJA96_12195 PF13186 Iron-sulfur cluster-binding domain EJA96_12205 PF00465 Iron-containing alcohol dehydrogenase EJA96_12210 PF00512 His Kinase A (phospho-acceptor) domain EJA96_12210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_12215 PF07690 Major Facilitator Superfamily EJA96_12235 PF13193 AMP-binding enzyme C-terminal domain EJA96_12235 PF00501 AMP-binding enzyme EJA96_12240 PF03466 LysR substrate binding domain EJA96_12240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_12245 PF01144 Coenzyme A transferase EJA96_12250 PF01144 Coenzyme A transferase EJA96_12260 PF02667 Short chain fatty acid transporter EJA96_12265 PF00106 short chain dehydrogenase EJA96_12275 PF00989 PAS fold EJA96_12275 PF02954 Bacterial regulatory protein, Fis family EJA96_12275 PF00158 Sigma-54 interaction domain EJA96_12280 PF07690 Major Facilitator Superfamily EJA96_12285 PF13417 Glutathione S-transferase, N-terminal domain EJA96_12290 PF01557 Fumarylacetoacetate (FAA) hydrolase family EJA96_12295 PF04209 homogentisate 1,2-dioxygenase EJA96_12305 PF00682 HMGL-like EJA96_12320 PF01039 Carboxyl transferase domain EJA96_12325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_12325 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_12325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_12330 PF13411 MerR HTH family regulatory protein EJA96_12335 PF06977 SdiA-regulated EJA96_12345 PF00873 AcrB/AcrD/AcrF family EJA96_12355 PF08361 MAATS-type transcriptional repressor, C-terminal region EJA96_12355 PF00440 Bacterial regulatory proteins, tetR family EJA96_12365 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EJA96_12365 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EJA96_12365 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EJA96_12370 PF00483 Nucleotidyl transferase EJA96_12375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EJA96_12380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EJA96_12380 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_12385 PF13593 SBF-like CPA transporter family (DUF4137) EJA96_12395 PF13404 AsnC-type helix-turn-helix domain EJA96_12395 PF01037 Lrp/AsnC ligand binding domain EJA96_12415 PF00155 Aminotransferase class I and II EJA96_12415 PF00392 Bacterial regulatory proteins, gntR family EJA96_12420 PF04954 Siderophore-interacting protein EJA96_12420 PF08021 Siderophore-interacting FAD-binding domain EJA96_12455 PF00120 Glutamine synthetase, catalytic domain EJA96_12460 PF00324 Amino acid permease EJA96_12470 PF00375 Sodium:dicarboxylate symporter family EJA96_12475 PF00849 RNA pseudouridylate synthase EJA96_12485 PF01809 Putative membrane protein insertion efficiency factor EJA96_12495 PF06719 AraC-type transcriptional regulator N-terminus EJA96_12495 PF12833 Helix-turn-helix domain EJA96_12510 PF04542 Sigma-70 region 2 EJA96_12510 PF08281 Sigma-70, region 4 EJA96_12520 PF02560 Cyanate lyase C-terminal domain EJA96_12525 PF00484 Carbonic anhydrase EJA96_12530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_12530 PF03466 LysR substrate binding domain EJA96_12535 PF07690 Major Facilitator Superfamily EJA96_12540 PF03466 LysR substrate binding domain EJA96_12540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_12550 PF07715 TonB-dependent Receptor Plug Domain EJA96_12550 PF00593 TonB dependent receptor EJA96_12555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EJA96_12560 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_12565 PF12911 N-terminal TM domain of oligopeptide transport permease C EJA96_12565 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_12575 PF00266 Aminotransferase class-V EJA96_12585 PF05275 Copper resistance protein B precursor (CopB) EJA96_12605 PF12832 MFS_1 like family EJA96_12610 PF16861 Carbamoyltransferase C-terminus EJA96_12610 PF02543 Carbamoyltransferase N-terminus EJA96_12625 PF00679 Elongation factor G C-terminus EJA96_12625 PF14492 Elongation Factor G, domain II EJA96_12625 PF00009 Elongation factor Tu GTP binding domain EJA96_12625 PF03764 Elongation factor G, domain IV EJA96_12625 PF03144 Elongation factor Tu domain 2 EJA96_12630 PF08447 PAS fold EJA96_12630 PF08448 PAS fold EJA96_12630 PF00990 Diguanylate cyclase, GGDEF domain EJA96_12630 PF00563 EAL domain EJA96_12635 PF00795 Carbon-nitrogen hydrolase EJA96_12635 PF00583 Acetyltransferase (GNAT) family EJA96_12670 PF00324 Amino acid permease EJA96_12680 PF00266 Aminotransferase class-V EJA96_12685 PF04199 Putative cyclase EJA96_12690 PF01037 Lrp/AsnC ligand binding domain EJA96_12695 PF00355 Rieske [2Fe-2S] domain EJA96_12695 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EJA96_12700 PF00733 Asparagine synthase EJA96_12700 PF13537 Glutamine amidotransferase domain EJA96_12705 PF00866 Ring hydroxylating beta subunit EJA96_12710 PF00561 alpha/beta hydrolase fold EJA96_12730 PF00296 Luciferase-like monooxygenase EJA96_12745 PF04542 Sigma-70 region 2 EJA96_12745 PF04545 Sigma-70, region 4 EJA96_12760 PF12833 Helix-turn-helix domain EJA96_12760 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EJA96_12765 PF00743 Flavin-binding monooxygenase-like EJA96_12775 PF00106 short chain dehydrogenase EJA96_12785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EJA96_12785 PF00205 Thiamine pyrophosphate enzyme, central domain EJA96_12785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EJA96_12795 PF02626 Carboxyltransferase domain, subdomain A and B EJA96_12805 PF03746 LamB/YcsF family EJA96_12820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_12820 PF03466 LysR substrate binding domain EJA96_12825 PF07286 Protein of unknown function (DUF1445) EJA96_12840 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EJA96_12840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EJA96_12840 PF02805 Metal binding domain of Ada EJA96_12840 PF12833 Helix-turn-helix domain EJA96_12865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_12865 PF03466 LysR substrate binding domain EJA96_12875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_12875 PF03466 LysR substrate binding domain EJA96_12880 PF00732 GMC oxidoreductase EJA96_12880 PF05199 GMC oxidoreductase EJA96_12890 PF02195 ParB-like nuclease domain EJA96_12900 PF11922 Domain of unknown function (DUF3440) EJA96_12900 PF01507 Phosphoadenosine phosphosulfate reductase family EJA96_12910 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EJA96_12910 PF02753 Pili assembly chaperone PapD, C-terminal domain EJA96_12915 PF13954 PapC N-terminal domain EJA96_12915 PF00577 Outer membrane usher protein EJA96_12915 PF13953 PapC C-terminal domain EJA96_12925 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EJA96_12925 PF02753 Pili assembly chaperone PapD, C-terminal domain EJA96_12945 PF04239 Protein of unknown function (DUF421) EJA96_12960 PF04679 ATP dependent DNA ligase C terminal region EJA96_12960 PF13298 DNA polymerase Ligase (LigD) EJA96_12960 PF01068 ATP dependent DNA ligase domain EJA96_12995 PF00343 Carbohydrate phosphorylase EJA96_13010 PF00199 Catalase EJA96_13010 PF06628 Catalase-related immune-responsive EJA96_13010 PF18011 C-terminal domain found in long catalases EJA96_13020 PF02308 MgtC family EJA96_13030 PF02735 Ku70/Ku80 beta-barrel domain EJA96_13035 PF11896 Domain of unknown function (DUF3416) EJA96_13035 PF00128 Alpha amylase, catalytic domain EJA96_13040 PF16657 Maltogenic Amylase, C-terminal domain EJA96_13040 PF00128 Alpha amylase, catalytic domain EJA96_13045 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EJA96_13045 PF02806 Alpha amylase, C-terminal all-beta domain EJA96_13045 PF00128 Alpha amylase, catalytic domain EJA96_13050 PF03706 Lysylphosphatidylglycerol synthase TM region EJA96_13055 PF13091 PLD-like domain EJA96_13060 PF03372 Endonuclease/Exonuclease/phosphatase family EJA96_13070 PF13823 Alcohol dehydrogenase GroES-associated EJA96_13070 PF08240 Alcohol dehydrogenase GroES-like domain EJA96_13070 PF00107 Zinc-binding dehydrogenase EJA96_13085 PF00128 Alpha amylase, catalytic domain EJA96_13085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EJA96_13105 PF11941 Domain of unknown function (DUF3459) EJA96_13105 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EJA96_13105 PF00128 Alpha amylase, catalytic domain EJA96_13110 PF08323 Starch synthase catalytic domain EJA96_13110 PF00534 Glycosyl transferases group 1 EJA96_13145 PF05343 M42 glutamyl aminopeptidase EJA96_13175 PF00072 Response regulator receiver domain EJA96_13175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_13175 PF13426 PAS domain EJA96_13190 PF05175 Methyltransferase small domain EJA96_13190 PF17827 PrmC N-terminal domain EJA96_13225 PF00571 CBS domain EJA96_13240 PF04324 BFD-like [2Fe-2S] binding domain EJA96_13240 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_13245 PF01266 FAD dependent oxidoreductase EJA96_13250 PF16925 Tetracyclin repressor-like, C-terminal domain EJA96_13250 PF00440 Bacterial regulatory proteins, tetR family EJA96_13255 PF00107 Zinc-binding dehydrogenase EJA96_13255 PF16884 N-terminal domain of oxidoreductase EJA96_13265 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EJA96_13265 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EJA96_13270 PF03707 Bacterial signalling protein N terminal repeat EJA96_13270 PF00563 EAL domain EJA96_13270 PF00990 Diguanylate cyclase, GGDEF domain EJA96_13280 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_13285 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_13300 PF03466 LysR substrate binding domain EJA96_13300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_13305 PF01970 Tripartite tricarboxylate transporter TctA family EJA96_13345 PF03435 Saccharopine dehydrogenase NADP binding domain EJA96_13345 PF16653 Saccharopine dehydrogenase C-terminal domain EJA96_13370 PF01526 Tn3 transposase DDE domain EJA96_13370 PF13700 Domain of unknown function (DUF4158) EJA96_13390 PF04909 Amidohydrolase EJA96_13395 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EJA96_13400 PF03573 outer membrane porin, OprD family EJA96_13405 PF07690 Major Facilitator Superfamily EJA96_13410 PF13378 Enolase C-terminal domain-like EJA96_13410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EJA96_13420 PF00171 Aldehyde dehydrogenase family EJA96_13425 PF04403 Paraquat-inducible protein A EJA96_13430 PF02470 MlaD protein EJA96_13440 PF02954 Bacterial regulatory protein, Fis family EJA96_13440 PF06506 Propionate catabolism activator EJA96_13440 PF00158 Sigma-54 interaction domain EJA96_13455 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_13455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_13455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_13470 PF04341 Protein of unknown function, DUF485 EJA96_13475 PF00474 Sodium:solute symporter family EJA96_13490 PF00202 Aminotransferase class-III EJA96_13495 PF00171 Aldehyde dehydrogenase family EJA96_13500 PF00324 Amino acid permease EJA96_13505 PF00465 Iron-containing alcohol dehydrogenase EJA96_13515 PF00743 Flavin-binding monooxygenase-like EJA96_13525 PF05721 Phytanoyl-CoA dioxygenase (PhyH) EJA96_13530 PF01266 FAD dependent oxidoreductase EJA96_13600 PF01695 IstB-like ATP binding protein EJA96_13605 PF00665 Integrase core domain EJA96_13635 PF03176 MMPL family EJA96_13640 PF14870 Photosynthesis system II assembly factor YCF48 EJA96_13645 PF05721 Phytanoyl-CoA dioxygenase (PhyH) EJA96_13650 PF13556 PucR C-terminal helix-turn-helix domain EJA96_13650 PF07905 Purine catabolism regulatory protein-like family EJA96_13650 PF17853 GGDEF-like domain EJA96_13875 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EJA96_13875 PF12833 Helix-turn-helix domain EJA96_13885 PF03475 3-alpha domain EJA96_13885 PF03473 MOSC domain EJA96_13900 PF02397 Bacterial sugar transferase EJA96_13905 PF01050 Mannose-6-phosphate isomerase EJA96_13905 PF00483 Nucleotidyl transferase EJA96_13910 PF00535 Glycosyl transferase family 2 EJA96_13915 PF18412 Outer-membrane lipoprotein Wza C-terminal domain EJA96_13915 PF10531 SLBB domain EJA96_13915 PF02563 Polysaccharide biosynthesis/export protein EJA96_13950 PF03023 Lipid II flippase MurJ EJA96_13975 PF01037 Lrp/AsnC ligand binding domain EJA96_13980 PF00676 Dehydrogenase E1 component EJA96_13980 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal EJA96_13985 PF02779 Transketolase, pyrimidine binding domain EJA96_13985 PF02780 Transketolase, C-terminal domain EJA96_13990 PF00364 Biotin-requiring enzyme EJA96_13990 PF02817 e3 binding domain EJA96_13990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EJA96_13995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EJA96_13995 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_14010 PF17763 Glutaminase/Asparaginase C-terminal domain EJA96_14010 PF00710 Asparaginase, N-terminal EJA96_14040 PF03466 LysR substrate binding domain EJA96_14040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_14045 PF00356 Bacterial regulatory proteins, lacI family EJA96_14055 PF00294 pfkB family carbohydrate kinase EJA96_14065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EJA96_14065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EJA96_14070 PF13618 Gluconate 2-dehydrogenase subunit 3 EJA96_14075 PF00732 GMC oxidoreductase EJA96_14075 PF05199 GMC oxidoreductase EJA96_14080 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EJA96_14080 PF00034 Cytochrome c EJA96_14090 PF06418 CTP synthase N-terminus EJA96_14090 PF00117 Glutamine amidotransferase class-I EJA96_14105 PF00440 Bacterial regulatory proteins, tetR family EJA96_14110 PF00583 Acetyltransferase (GNAT) family EJA96_14115 PF00905 Penicillin binding protein transpeptidase domain EJA96_14115 PF03717 Penicillin-binding Protein dimerisation domain EJA96_14120 PF00376 MerR family regulatory protein EJA96_14120 PF09278 MerR, DNA binding EJA96_14130 PF00107 Zinc-binding dehydrogenase EJA96_14130 PF08240 Alcohol dehydrogenase GroES-like domain EJA96_14135 PF06719 AraC-type transcriptional regulator N-terminus EJA96_14135 PF12833 Helix-turn-helix domain EJA96_14140 PF01022 Bacterial regulatory protein, arsR family EJA96_14145 PF02040 Arsenical pump membrane protein EJA96_14150 PF01451 Low molecular weight phosphotyrosine protein phosphatase EJA96_14155 PF03358 NADPH-dependent FMN reductase EJA96_14200 PF07715 TonB-dependent Receptor Plug Domain EJA96_14200 PF00593 TonB dependent receptor EJA96_14210 PF01011 PQQ enzyme repeat EJA96_14240 PF00890 FAD binding domain EJA96_14240 PF02910 Fumarate reductase flavoprotein C-term EJA96_14250 PF00704 Glycosyl hydrolases family 18 EJA96_14280 PF01810 LysE type translocator EJA96_14285 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_14290 PF00005 ABC transporter EJA96_14300 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EJA96_14310 PF07883 Cupin domain EJA96_14310 PF01381 Helix-turn-helix EJA96_14325 PF00144 Beta-lactamase EJA96_14330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_14330 PF03466 LysR substrate binding domain EJA96_14335 PF01266 FAD dependent oxidoreductase EJA96_14355 PF02447 GntP family permease EJA96_14365 PF00171 Aldehyde dehydrogenase family EJA96_14380 PF00296 Luciferase-like monooxygenase EJA96_14385 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_14395 PF00005 ABC transporter EJA96_14425 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_14430 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_14435 PF08402 TOBE domain EJA96_14435 PF00005 ABC transporter EJA96_14440 PF08125 Mannitol dehydrogenase C-terminal domain EJA96_14440 PF01232 Mannitol dehydrogenase Rossmann domain EJA96_14460 PF08028 Acyl-CoA dehydrogenase, C-terminal domain EJA96_14460 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_14460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_14465 PF08028 Acyl-CoA dehydrogenase, C-terminal domain EJA96_14465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_14470 PF00296 Luciferase-like monooxygenase EJA96_14475 PF03180 NLPA lipoprotein EJA96_14485 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_14490 PF03009 Glycerophosphoryl diester phosphodiesterase family EJA96_14495 PF03969 AFG1-like ATPase EJA96_14500 PF00158 Sigma-54 interaction domain EJA96_14510 PF00296 Luciferase-like monooxygenase EJA96_14515 PF03358 NADPH-dependent FMN reductase EJA96_14525 PF00158 Sigma-54 interaction domain EJA96_14600 PF04717 Type VI secretion system, phage-baseplate injector EJA96_14625 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EJA96_14630 PF00111 2Fe-2S iron-sulfur cluster binding domain EJA96_14630 PF01799 [2Fe-2S] binding domain EJA96_14645 PF01070 FMN-dependent dehydrogenase EJA96_14650 PF03466 LysR substrate binding domain EJA96_14650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_14655 PF01475 Ferric uptake regulator family EJA96_14660 PF01804 Penicillin amidase EJA96_14665 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) EJA96_14680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EJA96_14685 PF02687 FtsX-like permease family EJA96_14685 PF00005 ABC transporter EJA96_14685 PF12704 MacB-like periplasmic core domain EJA96_14690 PF02321 Outer membrane efflux protein EJA96_14715 PF00551 Formyl transferase EJA96_14720 PF00664 ABC transporter transmembrane region EJA96_14720 PF00005 ABC transporter EJA96_14725 PF07715 TonB-dependent Receptor Plug Domain EJA96_14725 PF00593 TonB dependent receptor EJA96_14735 PF00501 AMP-binding enzyme EJA96_14735 PF00668 Condensation domain EJA96_14735 PF00550 Phosphopantetheine attachment site EJA96_14735 PF13193 AMP-binding enzyme C-terminal domain EJA96_14735 PF00975 Thioesterase domain EJA96_14790 PF00005 ABC transporter EJA96_14795 PF00950 ABC 3 transport family EJA96_14810 PF03621 MbtH-like protein EJA96_14820 PF07995 Glucose / Sorbosone dehydrogenase EJA96_14835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_14835 PF03466 LysR substrate binding domain EJA96_14840 PF02678 Pirin EJA96_14840 PF05726 Pirin C-terminal cupin domain EJA96_14845 PF00857 Isochorismatase family EJA96_14850 PF03573 outer membrane porin, OprD family EJA96_14865 PF01867 CRISPR associated protein Cas1 EJA96_14870 PF18019 HD domain EJA96_14875 PF09611 CRISPR-associated protein (Cas_Csy1) EJA96_14880 PF09614 CRISPR-associated protein (Cas_Csy2) EJA96_14885 PF09615 CRISPR-associated protein (Cas_Csy3) EJA96_14890 PF09618 CRISPR-associated protein (Cas_Csy4) EJA96_14905 PF00975 Thioesterase domain EJA96_14920 PF03976 Polyphosphate kinase 2 (PPK2) EJA96_14930 PF13533 Biotin-lipoyl like EJA96_14940 PF04632 Fusaric acid resistance protein family EJA96_14950 PF03466 LysR substrate binding domain EJA96_14950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_15010 PF00464 Serine hydroxymethyltransferase EJA96_15020 PF02347 Glycine cleavage system P-protein EJA96_15025 PF01597 Glycine cleavage H-protein EJA96_15030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_15030 PF03466 LysR substrate binding domain EJA96_15035 PF07969 Amidohydrolase family EJA96_15040 PF00158 Sigma-54 interaction domain EJA96_15040 PF18024 Helix-turn-helix domain EJA96_15110 PF18624 CDI immunity protein EJA96_15115 PF13332 Hemagglutinin repeat EJA96_15115 PF05860 haemagglutination activity domain EJA96_15115 PF04829 Pre-toxin domain with VENN motif EJA96_15165 PF08479 POTRA domain, ShlB-type EJA96_15165 PF17287 POTRA domain EJA96_15165 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB EJA96_15180 PF07715 TonB-dependent Receptor Plug Domain EJA96_15180 PF00593 TonB dependent receptor EJA96_15190 PF08281 Sigma-70, region 4 EJA96_15190 PF04542 Sigma-70 region 2 EJA96_15200 PF07883 Cupin domain EJA96_15205 PF01557 Fumarylacetoacetate (FAA) hydrolase family EJA96_15210 PF07690 Major Facilitator Superfamily EJA96_15215 PF14497 Glutathione S-transferase, C-terminal domain EJA96_15215 PF02798 Glutathione S-transferase, N-terminal domain EJA96_15230 PF13098 Thioredoxin-like domain EJA96_15240 PF11412 Disulphide bond corrector protein DsbC EJA96_15240 PF02683 Cytochrome C biogenesis protein transmembrane region EJA96_15245 PF00486 Transcriptional regulatory protein, C terminal EJA96_15245 PF00072 Response regulator receiver domain EJA96_15260 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EJA96_15270 PF00296 Luciferase-like monooxygenase EJA96_15310 PF14765 Polyketide synthase dehydratase EJA96_15310 PF00550 Phosphopantetheine attachment site EJA96_15310 PF00698 Acyl transferase domain EJA96_15310 PF08240 Alcohol dehydrogenase GroES-like domain EJA96_15310 PF08659 KR domain EJA96_15310 PF00107 Zinc-binding dehydrogenase EJA96_15310 PF02801 Beta-ketoacyl synthase, C-terminal domain EJA96_15310 PF00109 Beta-ketoacyl synthase, N-terminal domain EJA96_15310 PF16197 Ketoacyl-synthetase C-terminal extension EJA96_15315 PF03466 LysR substrate binding domain EJA96_15315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_15325 PF00873 AcrB/AcrD/AcrF family EJA96_15330 PF02321 Outer membrane efflux protein EJA96_15335 PF05163 DinB family EJA96_15350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EJA96_15355 PF07690 Major Facilitator Superfamily EJA96_15380 PF03573 outer membrane porin, OprD family EJA96_15390 PF04444 Catechol dioxygenase N terminus EJA96_15390 PF00775 Dioxygenase EJA96_15395 PF02426 Muconolactone delta-isomerase EJA96_15400 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EJA96_15400 PF13378 Enolase C-terminal domain-like EJA96_15410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_15410 PF03466 LysR substrate binding domain EJA96_15415 PF14525 AraC-binding-like domain EJA96_15415 PF12833 Helix-turn-helix domain EJA96_15425 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EJA96_15425 PF00355 Rieske [2Fe-2S] domain EJA96_15430 PF00866 Ring hydroxylating beta subunit EJA96_15435 PF00175 Oxidoreductase NAD-binding domain EJA96_15435 PF00970 Oxidoreductase FAD-binding domain EJA96_15435 PF00111 2Fe-2S iron-sulfur cluster binding domain EJA96_15440 PF00106 short chain dehydrogenase EJA96_15445 PF00970 Oxidoreductase FAD-binding domain EJA96_15445 PF00111 2Fe-2S iron-sulfur cluster binding domain EJA96_15445 PF00175 Oxidoreductase NAD-binding domain EJA96_15450 PF00866 Ring hydroxylating beta subunit EJA96_15455 PF00355 Rieske [2Fe-2S] domain EJA96_15455 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EJA96_15460 PF12833 Helix-turn-helix domain EJA96_15460 PF14525 AraC-binding-like domain EJA96_15465 PF00873 AcrB/AcrD/AcrF family EJA96_15470 PF00529 HlyD membrane-fusion protein of T1SS EJA96_15470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EJA96_15475 PF02321 Outer membrane efflux protein EJA96_15480 PF00072 Response regulator receiver domain EJA96_15480 PF00486 Transcriptional regulatory protein, C terminal EJA96_15485 PF00672 HAMP domain EJA96_15485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_15485 PF00512 His Kinase A (phospho-acceptor) domain EJA96_15495 PF02321 Outer membrane efflux protein EJA96_15500 PF00873 AcrB/AcrD/AcrF family EJA96_15505 PF00873 AcrB/AcrD/AcrF family EJA96_15510 PF13533 Biotin-lipoyl like EJA96_15540 PF08534 Redoxin EJA96_15545 PF01235 Sodium:alanine symporter family EJA96_15550 PF03466 LysR substrate binding domain EJA96_15550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_15555 PF00248 Aldo/keto reductase family EJA96_15575 PF00782 Dual specificity phosphatase, catalytic domain EJA96_15580 PF12146 Serine aminopeptidase, S33 EJA96_15580 PF12147 Putative methyltransferase EJA96_15585 PF01066 CDP-alcohol phosphatidyltransferase EJA96_15590 PF04357 TamB, inner membrane protein subunit of TAM complex EJA96_15595 PF01103 Surface antigen EJA96_15595 PF17243 POTRA domain TamA domain 1 EJA96_15595 PF07244 Surface antigen variable number repeat EJA96_15605 PF03372 Endonuclease/Exonuclease/phosphatase family EJA96_15610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EJA96_15615 PF03466 LysR substrate binding domain EJA96_15615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_15625 PF03741 Integral membrane protein TerC family EJA96_15635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_15635 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_15635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_15640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_15640 PF03466 LysR substrate binding domain EJA96_15645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_15645 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_15645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_15660 PF00501 AMP-binding enzyme EJA96_15660 PF13193 AMP-binding enzyme C-terminal domain EJA96_15665 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EJA96_15665 PF12833 Helix-turn-helix domain EJA96_15670 PF13193 AMP-binding enzyme C-terminal domain EJA96_15670 PF00501 AMP-binding enzyme EJA96_15675 PF02308 MgtC family EJA96_15695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_15695 PF00672 HAMP domain EJA96_15705 PF00916 Sulfate permease family EJA96_15705 PF01740 STAS domain EJA96_15710 PF13649 Methyltransferase domain EJA96_15730 PF00563 EAL domain EJA96_15730 PF01590 GAF domain EJA96_15730 PF00990 Diguanylate cyclase, GGDEF domain EJA96_15730 PF00360 Phytochrome region EJA96_15745 PF07828 PA-IL-like protein EJA96_15755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_15755 PF00512 His Kinase A (phospho-acceptor) domain EJA96_15760 PF02954 Bacterial regulatory protein, Fis family EJA96_15760 PF00072 Response regulator receiver domain EJA96_15760 PF00158 Sigma-54 interaction domain EJA96_15765 PF00672 HAMP domain EJA96_15765 PF12729 Four helix bundle sensory module for signal transduction EJA96_15765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_15770 PF00487 Fatty acid desaturase EJA96_15785 PF01037 Lrp/AsnC ligand binding domain EJA96_15790 PF00583 Acetyltransferase (GNAT) family EJA96_15795 PF03301 Tryptophan 2,3-dioxygenase EJA96_15800 PF02525 Flavodoxin-like fold EJA96_15820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_15820 PF00512 His Kinase A (phospho-acceptor) domain EJA96_15820 PF01627 Hpt domain EJA96_15820 PF00989 PAS fold EJA96_15820 PF00072 Response regulator receiver domain EJA96_15820 PF00497 Bacterial extracellular solute-binding proteins, family 3 EJA96_15835 PF01066 CDP-alcohol phosphatidyltransferase EJA96_15840 PF08459 UvrC Helix-hairpin-helix N-terminal EJA96_15840 PF02151 UvrB/uvrC motif EJA96_15840 PF01541 GIY-YIG catalytic domain EJA96_15845 PF00072 Response regulator receiver domain EJA96_15845 PF00196 Bacterial regulatory proteins, luxR family EJA96_15855 PF01494 FAD binding domain EJA96_15860 PF12833 Helix-turn-helix domain EJA96_15860 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EJA96_15875 PF00196 Bacterial regulatory proteins, luxR family EJA96_15875 PF00072 Response regulator receiver domain EJA96_15880 PF13416 Bacterial extracellular solute-binding protein EJA96_15890 PF09084 NMT1/THI5 like EJA96_15900 PF09084 NMT1/THI5 like EJA96_15905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_15905 PF08028 Acyl-CoA dehydrogenase, C-terminal domain EJA96_15905 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_15910 PF00296 Luciferase-like monooxygenase EJA96_15915 PF09084 NMT1/THI5 like EJA96_15920 PF00296 Luciferase-like monooxygenase EJA96_15925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_15925 PF03466 LysR substrate binding domain EJA96_15930 PF05995 Cysteine dioxygenase type I EJA96_15945 PF01027 Inhibitor of apoptosis-promoting Bax1 EJA96_15950 PF02635 DsrE/DsrF-like family EJA96_15955 PF02635 DsrE/DsrF-like family EJA96_15960 PF04077 DsrH like protein EJA96_15965 PF04358 DsrC like protein EJA96_15970 PF02885 Glycosyl transferase family, helical bundle domain EJA96_15970 PF00591 Glycosyl transferase family, a/b domain EJA96_15975 PF13409 Glutathione S-transferase, N-terminal domain EJA96_15980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EJA96_15980 PF14824 Sirohaem biosynthesis protein central EJA96_15980 PF10414 Sirohaem synthase dimerisation region EJA96_15985 PF02403 Seryl-tRNA synthetase N-terminal domain EJA96_15985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EJA96_15990 PF00004 ATPase family associated with various cellular activities (AAA) EJA96_15990 PF16193 AAA C-terminal domain EJA96_15990 PF12002 MgsA AAA+ ATPase C terminal EJA96_15995 PF03548 Outer membrane lipoprotein carrier protein LolA EJA96_16000 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EJA96_16000 PF17854 FtsK alpha domain EJA96_16000 PF09397 Ftsk gamma domain EJA96_16000 PF01580 FtsK/SpoIIIE family EJA96_16005 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_16010 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EJA96_16015 PF04377 Arginine-tRNA-protein transferase, C terminus EJA96_16015 PF04376 Arginine-tRNA-protein transferase, N terminus EJA96_16020 PF01176 Translation initiation factor 1A / IF-1 EJA96_16025 PF07724 AAA domain (Cdc48 subfamily) EJA96_16025 PF17871 AAA lid domain EJA96_16025 PF02861 Clp amino terminal domain, pathogenicity island component EJA96_16025 PF00004 ATPase family associated with various cellular activities (AAA) EJA96_16025 PF10431 C-terminal, D2-small domain, of ClpB protein EJA96_16030 PF02617 ATP-dependent Clp protease adaptor protein ClpS EJA96_16035 PF00313 'Cold-shock' DNA-binding domain EJA96_16040 PF00180 Isocitrate/isopropylmalate dehydrogenase EJA96_16045 PF03971 Monomeric isocitrate dehydrogenase EJA96_16050 PF00293 NUDIX domain EJA96_16060 PF04356 Protein of unknown function (DUF489) EJA96_16070 PF08328 Adenylosuccinate lyase C-terminal EJA96_16070 PF00206 Lyase EJA96_16075 PF08007 Cupin superfamily protein EJA96_16080 PF13673 Acetyltransferase (GNAT) domain EJA96_16100 PF00463 Isocitrate lyase family EJA96_16115 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 EJA96_16120 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit EJA96_16125 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit EJA96_16125 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit EJA96_16135 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EJA96_16135 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EJA96_16140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EJA96_16140 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EJA96_16140 PF00384 Molybdopterin oxidoreductase EJA96_16145 PF00146 NADH dehydrogenase EJA96_16150 PF12838 4Fe-4S dicluster domain EJA96_16155 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 EJA96_16160 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EJA96_16165 PF00361 Proton-conducting membrane transporter EJA96_16165 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EJA96_16170 PF00361 Proton-conducting membrane transporter EJA96_16175 PF00361 Proton-conducting membrane transporter EJA96_16180 PF08241 Methyltransferase domain EJA96_16185 PF01594 AI-2E family transporter EJA96_16190 PF00672 HAMP domain EJA96_16190 PF17200 Single Cache domain 2 EJA96_16190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_16195 PF13726 Na+-H+ antiporter family EJA96_16195 PF03553 Na+/H+ antiporter family EJA96_16200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_16200 PF00672 HAMP domain EJA96_16210 PF08918 PhoQ Sensor EJA96_16210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_16215 PF00072 Response regulator receiver domain EJA96_16215 PF00486 Transcriptional regulatory protein, C terminal EJA96_16240 PF17263 Family of unknown function (DUF5329) EJA96_16255 PF00970 Oxidoreductase FAD-binding domain EJA96_16255 PF00042 Globin EJA96_16255 PF00175 Oxidoreductase NAD-binding domain EJA96_16265 PF01242 6-pyruvoyl tetrahydropterin synthase EJA96_16310 PF08334 Type II secretion system (T2SS), protein G EJA96_16310 PF07963 Prokaryotic N-terminal methylation motif EJA96_16315 PF00482 Type II secretion system (T2SS), protein F EJA96_16320 PF00437 Type II/IV secretion system protein EJA96_16320 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EJA96_16325 PF01061 ABC-2 type transporter EJA96_16335 PF08240 Alcohol dehydrogenase GroES-like domain EJA96_16335 PF00107 Zinc-binding dehydrogenase EJA96_16340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_16340 PF03466 LysR substrate binding domain EJA96_16345 PF01738 Dienelactone hydrolase family EJA96_16350 PF00291 Pyridoxal-phosphate dependent enzyme EJA96_16365 PF04717 Type VI secretion system, phage-baseplate injector EJA96_16370 PF00072 Response regulator receiver domain EJA96_16370 PF00486 Transcriptional regulatory protein, C terminal EJA96_16375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_16375 PF00672 HAMP domain EJA96_16375 PF16750 Sensor domain of 2-component histidine kinase EJA96_16375 PF00512 His Kinase A (phospho-acceptor) domain EJA96_16390 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_16395 PF02082 Transcriptional regulator EJA96_16400 PF03061 Thioesterase superfamily EJA96_16410 PF07759 Protein of unknown function (DUF1615) EJA96_16415 PF12833 Helix-turn-helix domain EJA96_16430 PF07969 Amidohydrolase family EJA96_16435 PF03573 outer membrane porin, OprD family EJA96_16460 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EJA96_16460 PF12833 Helix-turn-helix domain EJA96_16475 PF10431 C-terminal, D2-small domain, of ClpB protein EJA96_16475 PF02861 Clp amino terminal domain, pathogenicity island component EJA96_16475 PF07724 AAA domain (Cdc48 subfamily) EJA96_16475 PF00004 ATPase family associated with various cellular activities (AAA) EJA96_16475 PF17871 AAA lid domain EJA96_16485 PF00291 Pyridoxal-phosphate dependent enzyme EJA96_16490 PF01810 LysE type translocator EJA96_16495 PF13416 Bacterial extracellular solute-binding protein EJA96_16510 PF01638 HxlR-like helix-turn-helix EJA96_16515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EJA96_16515 PF01568 Molydopterin dinucleotide binding domain EJA96_16515 PF00384 Molybdopterin oxidoreductase EJA96_16520 PF11953 Domain of unknown function (DUF3470) EJA96_16520 PF00037 4Fe-4S binding domain EJA96_16530 PF00561 alpha/beta hydrolase fold EJA96_16535 PF13411 MerR HTH family regulatory protein EJA96_16620 PF01555 DNA methylase EJA96_16630 PF00271 Helicase conserved C-terminal domain EJA96_16630 PF00176 SNF2 family N-terminal domain EJA96_16645 PF00216 Bacterial DNA-binding protein EJA96_16650 PF01588 Putative tRNA binding domain EJA96_16650 PF03147 Ferredoxin-fold anticodon binding domain EJA96_16650 PF03483 B3/4 domain EJA96_16650 PF03484 tRNA synthetase B5 domain EJA96_16650 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EJA96_16655 PF01409 tRNA synthetases class II core domain (F) EJA96_16655 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EJA96_16660 PF00453 Ribosomal protein L20 EJA96_16665 PF01632 Ribosomal protein L35 EJA96_16670 PF05198 Translation initiation factor IF-3, N-terminal domain EJA96_16670 PF00707 Translation initiation factor IF-3, C-terminal domain EJA96_16675 PF03129 Anticodon binding domain EJA96_16675 PF02824 TGS domain EJA96_16675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EJA96_16675 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EJA96_16685 PF00561 alpha/beta hydrolase fold EJA96_16710 PF00557 Metallopeptidase family M24 EJA96_16720 PF04231 Endonuclease I EJA96_16740 PF03631 Virulence factor BrkB EJA96_16750 PF09335 SNARE associated Golgi protein EJA96_16775 PF03974 Ecotin EJA96_16790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_16790 PF03466 LysR substrate binding domain EJA96_16800 PF03573 outer membrane porin, OprD family EJA96_16835 PF04261 Dyp-type peroxidase family EJA96_16845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EJA96_16845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EJA96_16845 PF00378 Enoyl-CoA hydratase/isomerase EJA96_16855 PF00293 NUDIX domain EJA96_16860 PF02567 Phenazine biosynthesis-like protein EJA96_16870 PF00563 EAL domain EJA96_16870 PF00990 Diguanylate cyclase, GGDEF domain EJA96_16870 PF03707 Bacterial signalling protein N terminal repeat EJA96_16910 PF01266 FAD dependent oxidoreductase EJA96_16915 PF01226 Formate/nitrite transporter EJA96_16965 PF13443 Cro/C1-type HTH DNA-binding domain EJA96_16975 PF07687 Peptidase dimerisation domain EJA96_16975 PF01546 Peptidase family M20/M25/M40 EJA96_16980 PF02743 Cache domain EJA96_16980 PF00672 HAMP domain EJA96_16980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_17045 PF02899 Phage integrase, N-terminal SAM-like domain EJA96_17045 PF00589 Phage integrase family EJA96_17080 PF13195 Protein of unknown function (DUF4011) EJA96_17080 PF13087 AAA domain EJA96_17080 PF13086 AAA domain EJA96_17110 PF01207 Dihydrouridine synthase (Dus) EJA96_17115 PF00923 Transaldolase/Fructose-6-phosphate aldolase EJA96_17125 PF00072 Response regulator receiver domain EJA96_17135 PF04333 MlaA lipoprotein EJA96_17145 PF07702 UTRA domain EJA96_17145 PF00392 Bacterial regulatory proteins, gntR family EJA96_17155 PF01966 HD domain EJA96_17165 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term EJA96_17165 PF14489 QueF-like protein EJA96_17180 PF00072 Response regulator receiver domain EJA96_17180 PF00486 Transcriptional regulatory protein, C terminal EJA96_17190 PF01061 ABC-2 type transporter EJA96_17195 PF00005 ABC transporter EJA96_17200 PF13417 Glutathione S-transferase, N-terminal domain EJA96_17200 PF00043 Glutathione S-transferase, C-terminal domain EJA96_17210 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_17210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_17210 PF09317 Domain of unknown function (DUF1974) EJA96_17210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_17295 PF00043 Glutathione S-transferase, C-terminal domain EJA96_17295 PF02798 Glutathione S-transferase, N-terminal domain EJA96_17300 PF13185 GAF domain EJA96_17305 PF17864 RuvB AAA lid domain EJA96_17305 PF05491 RuvB C-terminal winged helix domain EJA96_17305 PF05496 Holliday junction DNA helicase RuvB P-loop domain EJA96_17310 PF00672 HAMP domain EJA96_17310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_17310 PF01627 Hpt domain EJA96_17310 PF00512 His Kinase A (phospho-acceptor) domain EJA96_17310 PF00072 Response regulator receiver domain EJA96_17310 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EJA96_17315 PF01047 MarR family EJA96_17320 PF00255 Glutathione peroxidase EJA96_17325 PF01641 SelR domain EJA96_17330 PF00155 Aminotransferase class I and II EJA96_17340 PF01435 Peptidase family M48 EJA96_17345 PF00246 Zinc carboxypeptidase EJA96_17345 PF18027 Cytosolic carboxypeptidase N-terminal domain EJA96_17350 PF05724 Thiopurine S-methyltransferase (TPMT) EJA96_17355 PF00582 Universal stress protein family EJA96_17360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_17360 PF03466 LysR substrate binding domain EJA96_17365 PF07690 Major Facilitator Superfamily EJA96_17370 PF13533 Biotin-lipoyl like EJA96_17375 PF02321 Outer membrane efflux protein EJA96_17380 PF03466 LysR substrate binding domain EJA96_17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_17385 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EJA96_17390 PF03880 DbpA RNA binding domain EJA96_17390 PF00270 DEAD/DEAH box helicase EJA96_17390 PF00271 Helicase conserved C-terminal domain EJA96_17395 PF00378 Enoyl-CoA hydratase/isomerase EJA96_17405 PF01474 Class-II DAHP synthetase family EJA96_17410 PF06224 Winged helix DNA-binding domain EJA96_17420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_17420 PF03466 LysR substrate binding domain EJA96_17430 PF03466 LysR substrate binding domain EJA96_17430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_17435 PF01047 MarR family EJA96_17440 PF02566 OsmC-like protein EJA96_17445 PF01132 Elongation factor P (EF-P) OB domain EJA96_17445 PF08207 Elongation factor P (EF-P) KOW-like domain EJA96_17445 PF09285 Elongation factor P, C-terminal EJA96_17460 PF11839 Alanine-zipper, major outer membrane lipoprotein EJA96_17465 PF17969 L,D-transpeptidase C-terminal domain EJA96_17465 PF03734 L,D-transpeptidase catalytic domain EJA96_17475 PF13472 GDSL-like Lipase/Acylhydrolase family EJA96_17480 PF00005 ABC transporter EJA96_17490 PF01272 Transcription elongation factor, GreA/GreB, C-term EJA96_17490 PF03449 Transcription elongation factor, N-terminal EJA96_17500 PF02834 LigT like Phosphoesterase EJA96_17505 PF00561 alpha/beta hydrolase fold EJA96_17510 PF03280 Proteobacterial lipase chaperone protein EJA96_17515 PF07681 DoxX EJA96_17520 PF00497 Bacterial extracellular solute-binding proteins, family 3 EJA96_17520 PF01464 Transglycosylase SLT domain EJA96_17525 PF01026 TatD related DNase EJA96_17530 PF12729 Four helix bundle sensory module for signal transduction EJA96_17530 PF00672 HAMP domain EJA96_17530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_17545 PF00990 Diguanylate cyclase, GGDEF domain EJA96_17545 PF07694 5TMR of 5TMR-LYT EJA96_17570 PF07726 ATPase family associated with various cellular activities (AAA) EJA96_17570 PF17863 AAA lid domain EJA96_17575 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EJA96_17580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_17580 PF03466 LysR substrate binding domain EJA96_17590 PF03466 LysR substrate binding domain EJA96_17590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_17600 PF02954 Bacterial regulatory protein, Fis family EJA96_17600 PF00072 Response regulator receiver domain EJA96_17600 PF00158 Sigma-54 interaction domain EJA96_17605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_17605 PF00072 Response regulator receiver domain EJA96_17605 PF00512 His Kinase A (phospho-acceptor) domain EJA96_17605 PF13188 PAS domain EJA96_17605 PF08448 PAS fold EJA96_17620 PF17932 Tetracyclin repressor-like, C-terminal domain EJA96_17620 PF00440 Bacterial regulatory proteins, tetR family EJA96_17635 PF01039 Carboxyl transferase domain EJA96_17640 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_17640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_17640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_17660 PF00668 Condensation domain EJA96_17660 PF00550 Phosphopantetheine attachment site EJA96_17660 PF13193 AMP-binding enzyme C-terminal domain EJA96_17660 PF00501 AMP-binding enzyme EJA96_17660 PF00975 Thioesterase domain EJA96_17675 PF04542 Sigma-70 region 2 EJA96_17675 PF08281 Sigma-70, region 4 EJA96_17680 PF00392 Bacterial regulatory proteins, gntR family EJA96_17680 PF00155 Aminotransferase class I and II EJA96_17690 PF00196 Bacterial regulatory proteins, luxR family EJA96_17690 PF00072 Response regulator receiver domain EJA96_17695 PF00691 OmpA family EJA96_17695 PF05736 OprF membrane domain EJA96_17720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EJA96_17725 PF02570 Precorrin-8X methylmutase EJA96_17740 PF01888 CbiD EJA96_17750 PF02659 Putative manganese efflux pump EJA96_17755 PF00593 TonB dependent receptor EJA96_17755 PF07715 TonB-dependent Receptor Plug Domain EJA96_17775 PF00753 Metallo-beta-lactamase superfamily EJA96_17800 PF00672 HAMP domain EJA96_17800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_17805 PF03466 LysR substrate binding domain EJA96_17805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_17810 PF07687 Peptidase dimerisation domain EJA96_17810 PF01546 Peptidase family M20/M25/M40 EJA96_17815 PF00497 Bacterial extracellular solute-binding proteins, family 3 EJA96_17820 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_17825 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_17830 PF00005 ABC transporter EJA96_17855 PF03466 LysR substrate binding domain EJA96_17855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_17860 PF00440 Bacterial regulatory proteins, tetR family EJA96_17865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EJA96_17870 PF07690 Major Facilitator Superfamily EJA96_17875 PF00561 alpha/beta hydrolase fold EJA96_17895 PF00860 Permease family EJA96_17905 PF04389 Peptidase family M28 EJA96_17905 PF02225 PA domain EJA96_17925 PF00793 DAHP synthetase I family EJA96_17930 PF02514 CobN/Magnesium Chelatase EJA96_17935 PF02492 CobW/HypB/UreG, nucleotide-binding domain EJA96_17935 PF07683 Cobalamin synthesis protein cobW C-terminal domain EJA96_17950 PF01890 Cobalamin synthesis G C-terminus EJA96_17950 PF11761 Cobalamin biosynthesis central region EJA96_17950 PF11760 Cobalamin synthesis G N-terminal EJA96_17955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EJA96_17960 PF00561 alpha/beta hydrolase fold EJA96_17965 PF07055 Enoyl reductase FAD binding domain EJA96_17965 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase EJA96_17965 PF12241 Trans-2-enoyl-CoA reductase catalytic region EJA96_17970 PF01012 Electron transfer flavoprotein domain EJA96_17970 PF00766 Electron transfer flavoprotein FAD-binding domain EJA96_17975 PF01012 Electron transfer flavoprotein domain EJA96_18000 PF00440 Bacterial regulatory proteins, tetR family EJA96_18005 PF00266 Aminotransferase class-V EJA96_18010 PF01026 TatD related DNase EJA96_18020 PF09115 DNA polymerase III, delta subunit, C terminal EJA96_18025 PF02223 Thymidylate kinase EJA96_18030 PF02618 YceG-like family EJA96_18035 PF01063 Amino-transferase class IV EJA96_18040 PF00109 Beta-ketoacyl synthase, N-terminal domain EJA96_18040 PF02801 Beta-ketoacyl synthase, C-terminal domain EJA96_18045 PF00550 Phosphopantetheine attachment site EJA96_18055 PF00698 Acyl transferase domain EJA96_18060 PF02504 Fatty acid synthesis protein EJA96_18065 PF01783 Ribosomal L32p protein family EJA96_18070 PF02620 Large ribosomal RNA subunit accumulation protein YceD EJA96_18075 PF02545 Maf-like protein EJA96_18080 PF06965 Na+/H+ antiporter 1 EJA96_18080 PF01343 Peptidase family S49 EJA96_18085 PF13419 Haloacid dehalogenase-like hydrolase EJA96_18090 PF00849 RNA pseudouridylate synthase EJA96_18090 PF01479 S4 domain EJA96_18105 PF01565 FAD binding domain EJA96_18105 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EJA96_18110 PF01451 Low molecular weight phosphotyrosine protein phosphatase EJA96_18115 PF02348 Cytidylyltransferase EJA96_18120 PF03966 Trm112p-like protein EJA96_18125 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EJA96_18130 PF02472 Biopolymer transport protein ExbD/TolR EJA96_18135 PF01618 MotA/TolQ/ExbB proton channel family EJA96_18150 PF02687 FtsX-like permease family EJA96_18150 PF12704 MacB-like periplasmic core domain EJA96_18160 PF12704 MacB-like periplasmic core domain EJA96_18160 PF02687 FtsX-like permease family EJA96_18175 PF03009 Glycerophosphoryl diester phosphodiesterase family EJA96_18180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EJA96_18180 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_18190 PF02424 ApbE family EJA96_18195 PF00111 2Fe-2S iron-sulfur cluster binding domain EJA96_18195 PF00970 Oxidoreductase FAD-binding domain EJA96_18195 PF00175 Oxidoreductase NAD-binding domain EJA96_18200 PF02508 Rnf-Nqr subunit, membrane protein EJA96_18205 PF02508 Rnf-Nqr subunit, membrane protein EJA96_18210 PF04205 FMN-binding domain EJA96_18215 PF03116 NQR2, RnfD, RnfE family EJA96_18220 PF11973 NQRA C-terminal domain EJA96_18220 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) EJA96_18225 PF00324 Amino acid permease EJA96_18230 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EJA96_18230 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EJA96_18245 PF01048 Phosphorylase superfamily EJA96_18250 PF00933 Glycosyl hydrolase family 3 N terminal domain EJA96_18255 PF00440 Bacterial regulatory proteins, tetR family EJA96_18260 PF00717 Peptidase S24-like EJA96_18260 PF01726 LexA DNA binding domain EJA96_18265 PF03846 Cell division inhibitor SulA EJA96_18280 PF01751 Toprim domain EJA96_18280 PF01131 DNA topoisomerase EJA96_18280 PF08272 Topoisomerase I zinc-ribbon-like EJA96_18280 PF01396 Topoisomerase DNA binding C4 zinc finger EJA96_18290 PF00108 Thiolase, N-terminal domain EJA96_18290 PF02803 Thiolase, C-terminal domain EJA96_18295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EJA96_18295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EJA96_18295 PF00378 Enoyl-CoA hydratase/isomerase EJA96_18315 PF00582 Universal stress protein family EJA96_18330 PF14718 Soluble lytic murein transglycosylase L domain EJA96_18330 PF01464 Transglycosylase SLT domain EJA96_18345 PF00781 Diacylglycerol kinase catalytic domain EJA96_18350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EJA96_18350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EJA96_18370 PF00994 Probable molybdopterin binding domain EJA96_18370 PF03453 MoeA N-terminal region (domain I and II) EJA96_18370 PF03454 MoeA C-terminal region (domain IV) EJA96_18375 PF00994 Probable molybdopterin binding domain EJA96_18380 PF12804 MobA-like NTP transferase domain EJA96_18405 PF00440 Bacterial regulatory proteins, tetR family EJA96_18410 PF02798 Glutathione S-transferase, N-terminal domain EJA96_18420 PF00753 Metallo-beta-lactamase superfamily EJA96_18420 PF16123 Hydroxyacylglutathione hydrolase C-terminus EJA96_18425 PF03573 outer membrane porin, OprD family EJA96_18430 PF00909 Ammonium Transporter Family EJA96_18455 PF01966 HD domain EJA96_18460 PF00512 His Kinase A (phospho-acceptor) domain EJA96_18460 PF01627 Hpt domain EJA96_18460 PF00989 PAS fold EJA96_18460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_18460 PF00497 Bacterial extracellular solute-binding proteins, family 3 EJA96_18460 PF00072 Response regulator receiver domain EJA96_18465 PF00072 Response regulator receiver domain EJA96_18465 PF00196 Bacterial regulatory proteins, luxR family EJA96_18470 PF04320 Protein with unknown function (DUF469) EJA96_18475 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family EJA96_18480 PF10672 S-adenosylmethionine-dependent methyltransferase EJA96_18480 PF02926 THUMP domain EJA96_18480 PF01170 Putative RNA methylase family UPF0020 EJA96_18490 PF04957 Ribosome modulation factor EJA96_18495 PF01180 Dihydroorotate dehydrogenase EJA96_18510 PF00561 alpha/beta hydrolase fold EJA96_18540 PF00534 Glycosyl transferases group 1 EJA96_18540 PF13439 Glycosyltransferase Family 4 EJA96_18565 PF03537 Glycoside-hydrolase family GH114 EJA96_18570 PF05088 Bacterial NAD-glutamate dehydrogenase EJA96_18580 PF17863 AAA lid domain EJA96_18580 PF07726 ATPase family associated with various cellular activities (AAA) EJA96_18585 PF01882 Protein of unknown function DUF58 EJA96_18615 PF00486 Transcriptional regulatory protein, C terminal EJA96_18615 PF00072 Response regulator receiver domain EJA96_18620 PF00512 His Kinase A (phospho-acceptor) domain EJA96_18620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_18635 PF07044 Protein of unknown function (DUF1329) EJA96_18650 PF17432 Domain of unknown function (DUF3458_C) ARM repeats EJA96_18650 PF01433 Peptidase family M1 domain EJA96_18650 PF11940 Domain of unknown function (DUF3458) Ig-like fold EJA96_18660 PF07023 Protein of unknown function (DUF1315) EJA96_18665 PF01694 Rhomboid family EJA96_18665 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease EJA96_18675 PF01513 ATP-NAD kinase EJA96_18695 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_18695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EJA96_18705 PF12833 Helix-turn-helix domain EJA96_18705 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EJA96_18725 PF04612 Type II secretion system (T2SS), protein M EJA96_18735 PF03934 Type II secretion system (T2SS), protein K EJA96_18740 PF07963 Prokaryotic N-terminal methylation motif EJA96_18740 PF11612 Type II secretion system (T2SS), protein J EJA96_18745 PF07963 Prokaryotic N-terminal methylation motif EJA96_18745 PF02501 Type II secretion system (T2SS), protein I EJA96_18750 PF07963 Prokaryotic N-terminal methylation motif EJA96_18750 PF12019 Type II transport protein GspH EJA96_18755 PF08334 Type II secretion system (T2SS), protein G EJA96_18755 PF07963 Prokaryotic N-terminal methylation motif EJA96_18760 PF00482 Type II secretion system (T2SS), protein F EJA96_18765 PF00437 Type II/IV secretion system protein EJA96_18770 PF11356 Type II secretion system protein C EJA96_18775 PF00263 Bacterial type II and III secretion system protein EJA96_18775 PF03958 Bacterial type II/III secretion system short domain EJA96_18785 PF01053 Cys/Met metabolism PLP-dependent enzyme EJA96_18790 PF00156 Phosphoribosyl transferase domain EJA96_18795 PF02674 Colicin V production protein EJA96_18800 PF05036 Sporulation related domain EJA96_18805 PF02875 Mur ligase family, glutamate ligase domain EJA96_18805 PF08245 Mur ligase middle domain EJA96_18810 PF01039 Carboxyl transferase domain EJA96_18810 PF17848 Acetyl-coA carboxylase zinc finger domain EJA96_18815 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EJA96_18820 PF01416 tRNA pseudouridine synthase EJA96_18830 PF02774 Semialdehyde dehydrogenase, dimerisation domain EJA96_18830 PF01118 Semialdehyde dehydrogenase, NAD binding domain EJA96_18835 PF02774 Semialdehyde dehydrogenase, dimerisation domain EJA96_18835 PF01118 Semialdehyde dehydrogenase, NAD binding domain EJA96_18840 PF00180 Isocitrate/isopropylmalate dehydrogenase EJA96_18845 PF08241 Methyltransferase domain EJA96_18850 PF00694 Aconitase C-terminal domain EJA96_18855 PF00330 Aconitase family (aconitate hydratase) EJA96_18860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_18865 PF01042 Endoribonuclease L-PSP EJA96_18870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_18870 PF03466 LysR substrate binding domain EJA96_18880 PF00011 Hsp20/alpha crystallin family EJA96_18885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EJA96_18895 PF01207 Dihydrouridine synthase (Dus) EJA96_18905 PF01081 KDPG and KHG aldolase EJA96_18910 PF00561 alpha/beta hydrolase fold EJA96_18940 PF00749 tRNA synthetases class I (E and Q), catalytic domain EJA96_18945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_18945 PF03466 LysR substrate binding domain EJA96_18950 PF13533 Biotin-lipoyl like EJA96_18955 PF07690 Major Facilitator Superfamily EJA96_18960 PF04851 Type III restriction enzyme, res subunit EJA96_18960 PF02151 UvrB/uvrC motif EJA96_18960 PF00271 Helicase conserved C-terminal domain EJA96_18960 PF17757 UvrB interaction domain EJA96_18960 PF12344 Ultra-violet resistance protein B EJA96_18965 PF00155 Aminotransferase class I and II EJA96_18980 PF02719 Polysaccharide biosynthesis protein EJA96_18985 PF00953 Glycosyl transferase family 4 EJA96_18990 PF01370 NAD dependent epimerase/dehydratase family EJA96_18995 PF13579 Glycosyl transferase 4-like domain EJA96_19000 PF02350 UDP-N-acetylglucosamine 2-epimerase EJA96_19005 PF01370 NAD dependent epimerase/dehydratase family EJA96_19010 PF08485 Polysaccharide biosynthesis protein C-terminal EJA96_19010 PF02719 Polysaccharide biosynthesis protein EJA96_19030 PF00535 Glycosyl transferase family 2 EJA96_19030 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 EJA96_19050 PF00216 Bacterial DNA-binding protein EJA96_19055 PF00575 S1 RNA binding domain EJA96_19060 PF02224 Cytidylate kinase EJA96_19065 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EJA96_19070 PF00155 Aminotransferase class I and II EJA96_19075 PF01842 ACT domain EJA96_19075 PF01817 Chorismate mutase type II EJA96_19075 PF00800 Prephenate dehydratase EJA96_19080 PF00266 Aminotransferase class-V EJA96_19085 PF03989 DNA gyrase C-terminal domain, beta-propeller EJA96_19085 PF00521 DNA gyrase/topoisomerase IV, subunit A EJA96_19090 PF01008 Initiation factor 2 subunit family EJA96_19095 PF01979 Amidohydrolase family EJA96_19105 PF13419 Haloacid dehalogenase-like hydrolase EJA96_19110 PF00106 short chain dehydrogenase EJA96_19120 PF00491 Arginase family EJA96_19125 PF03616 Sodium/glutamate symporter EJA96_19130 PF00990 Diguanylate cyclase, GGDEF domain EJA96_19145 PF00849 RNA pseudouridylate synthase EJA96_19145 PF01479 S4 domain EJA96_19155 PF01081 KDPG and KHG aldolase EJA96_19160 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EJA96_19165 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EJA96_19165 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EJA96_19170 PF01380 SIS domain EJA96_19170 PF01418 Helix-turn-helix domain, rpiR family EJA96_19175 PF01263 Aldose 1-epimerase EJA96_19185 PF04966 Carbohydrate-selective porin, OprB family EJA96_19190 PF00005 ABC transporter EJA96_19190 PF17912 MalK OB fold domain EJA96_19195 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_19205 PF01547 Bacterial extracellular solute-binding protein EJA96_19215 PF00672 HAMP domain EJA96_19215 PF00512 His Kinase A (phospho-acceptor) domain EJA96_19215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_19220 PF00486 Transcriptional regulatory protein, C terminal EJA96_19220 PF00072 Response regulator receiver domain EJA96_19225 PF02685 Glucokinase EJA96_19230 PF00920 Dehydratase family EJA96_19235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EJA96_19235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EJA96_19250 PF04079 Segregation and condensation complex subunit ScpB EJA96_19255 PF02616 Segregation and condensation protein ScpA EJA96_19260 PF01300 Telomere recombination EJA96_19265 PF02811 PHP domain EJA96_19270 PF04279 Intracellular septation protein A EJA96_19275 PF03795 YCII-related domain EJA96_19285 PF00486 Transcriptional regulatory protein, C terminal EJA96_19285 PF00072 Response regulator receiver domain EJA96_19295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_19295 PF16750 Sensor domain of 2-component histidine kinase EJA96_19295 PF00512 His Kinase A (phospho-acceptor) domain EJA96_19295 PF00672 HAMP domain EJA96_19305 PF00881 Nitroreductase family EJA96_19310 PF03692 Putative zinc- or iron-chelating domain EJA96_19315 PF02386 Cation transport protein EJA96_19320 PF02405 Permease MlaE EJA96_19325 PF00005 ABC transporter EJA96_19340 PF12833 Helix-turn-helix domain EJA96_19340 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EJA96_19350 PF00211 Adenylate and Guanylate cyclase catalytic domain EJA96_19355 PF13439 Glycosyltransferase Family 4 EJA96_19355 PF00534 Glycosyl transferases group 1 EJA96_19370 PF01588 Putative tRNA binding domain EJA96_19380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_19380 PF03466 LysR substrate binding domain EJA96_19385 PF03358 NADPH-dependent FMN reductase EJA96_19390 PF02798 Glutathione S-transferase, N-terminal domain EJA96_19390 PF00043 Glutathione S-transferase, C-terminal domain EJA96_19395 PF01370 NAD dependent epimerase/dehydratase family EJA96_19400 PF01597 Glycine cleavage H-protein EJA96_19410 PF02525 Flavodoxin-like fold EJA96_19425 PF00561 alpha/beta hydrolase fold EJA96_19430 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EJA96_19435 PF00005 ABC transporter EJA96_19435 PF00664 ABC transporter transmembrane region EJA96_19465 PF00474 Sodium:solute symporter family EJA96_19470 PF04341 Protein of unknown function, DUF485 EJA96_19475 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EJA96_19490 PF04333 MlaA lipoprotein EJA96_19495 PF05726 Pirin C-terminal cupin domain EJA96_19495 PF02678 Pirin EJA96_19505 PF03279 Bacterial lipid A biosynthesis acyltransferase EJA96_19510 PF05209 Septum formation inhibitor MinC, N-terminal domain EJA96_19510 PF03775 Septum formation inhibitor MinC, C-terminal domain EJA96_19515 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EJA96_19520 PF03776 Septum formation topological specificity factor MinE EJA96_19525 PF00849 RNA pseudouridylate synthase EJA96_19530 PF02127 Aminopeptidase I zinc metalloprotease (M18) EJA96_19535 PF13302 Acetyltransferase (GNAT) domain EJA96_19540 PF07702 UTRA domain EJA96_19540 PF00392 Bacterial regulatory proteins, gntR family EJA96_19555 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_19565 PF08402 TOBE domain EJA96_19565 PF00005 ABC transporter EJA96_19570 PF18429 Domain of unknown function (DUF5609) EJA96_19575 PF00550 Phosphopantetheine attachment site EJA96_19575 PF14765 Polyketide synthase dehydratase EJA96_19575 PF08659 KR domain EJA96_19575 PF02801 Beta-ketoacyl synthase, C-terminal domain EJA96_19575 PF00109 Beta-ketoacyl synthase, N-terminal domain EJA96_19575 PF16197 Ketoacyl-synthetase C-terminal extension EJA96_19575 PF08240 Alcohol dehydrogenase GroES-like domain EJA96_19575 PF00698 Acyl transferase domain EJA96_19580 PF17804 Tail specific protease N-terminal domain EJA96_19580 PF03572 Peptidase family S41 EJA96_19580 PF00595 PDZ domain EJA96_19580 PF11818 C-terminal domain of tail specific protease (DUF3340) EJA96_19585 PF17153 Periplasmic sensor domain, extracellular EJA96_19585 PF00563 EAL domain EJA96_19615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EJA96_19615 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EJA96_19630 PF04381 Putative exonuclease, RdgC EJA96_19635 PF01758 Sodium Bile acid symporter family EJA96_19640 PF00893 Small Multidrug Resistance protein EJA96_19645 PF00313 'Cold-shock' DNA-binding domain EJA96_19650 PF07690 Major Facilitator Superfamily EJA96_19655 PF00593 TonB dependent receptor EJA96_19655 PF07660 Secretin and TonB N terminus short domain EJA96_19655 PF07715 TonB-dependent Receptor Plug Domain EJA96_19660 PF12833 Helix-turn-helix domain EJA96_19660 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EJA96_19670 PF00512 His Kinase A (phospho-acceptor) domain EJA96_19670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_19690 PF02694 Uncharacterised BCR, YnfA/UPF0060 family EJA96_19700 PF00106 short chain dehydrogenase EJA96_19700 PF00561 alpha/beta hydrolase fold EJA96_19710 PF07396 Phosphate-selective porin O and P EJA96_19720 PF07396 Phosphate-selective porin O and P EJA96_19735 PF05114 Protein of unknown function (DUF692) EJA96_19750 PF04542 Sigma-70 region 2 EJA96_19750 PF08281 Sigma-70, region 4 EJA96_19755 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EJA96_19755 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EJA96_19760 PF12796 Ankyrin repeats (3 copies) EJA96_19760 PF00023 Ankyrin repeat EJA96_19805 PF01230 HIT domain EJA96_19810 PF00245 Alkaline phosphatase EJA96_19815 PF00271 Helicase conserved C-terminal domain EJA96_19815 PF11898 Domain of unknown function (DUF3418) EJA96_19815 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EJA96_19815 PF00270 DEAD/DEAH box helicase EJA96_19815 PF04408 Helicase associated domain (HA2) EJA96_19830 PF00501 AMP-binding enzyme EJA96_19830 PF13193 AMP-binding enzyme C-terminal domain EJA96_19835 PF00501 AMP-binding enzyme EJA96_19835 PF13193 AMP-binding enzyme C-terminal domain EJA96_19840 PF12146 Serine aminopeptidase, S33 EJA96_19845 PF01575 MaoC like domain EJA96_19850 PF07690 Major Facilitator Superfamily EJA96_19855 PF13533 Biotin-lipoyl like EJA96_19880 PF12137 RNA polymerase recycling family C-terminal EJA96_19880 PF18337 RapA N-terminal Tudor like domain EJA96_19880 PF00271 Helicase conserved C-terminal domain EJA96_19880 PF18339 RapA N-terminal Tudor like domain 1 EJA96_19880 PF00176 SNF2 family N-terminal domain EJA96_19890 PF00582 Universal stress protein family EJA96_19895 PF08019 Phosphoethanolamine transferase EptA/EptB EJA96_19895 PF00884 Sulfatase EJA96_19900 PF00990 Diguanylate cyclase, GGDEF domain EJA96_19900 PF00563 EAL domain EJA96_19900 PF03707 Bacterial signalling protein N terminal repeat EJA96_19905 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EJA96_19905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EJA96_19920 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_19925 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_19940 PF05506 Domain of unknown function (DUF756) EJA96_19940 PF04185 Phosphoesterase family EJA96_19955 PF03466 LysR substrate binding domain EJA96_19955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_19970 PF00561 alpha/beta hydrolase fold EJA96_19970 PF00106 short chain dehydrogenase EJA96_19980 PF00574 Clp protease EJA96_19990 PF01494 FAD binding domain EJA96_20000 PF00106 short chain dehydrogenase EJA96_20005 PF00067 Cytochrome P450 EJA96_20010 PF12680 SnoaL-like domain EJA96_20015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EJA96_20015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EJA96_20030 PF07690 Major Facilitator Superfamily EJA96_20035 PF01370 NAD dependent epimerase/dehydratase family EJA96_20045 PF01734 Patatin-like phospholipase EJA96_20070 PF01590 GAF domain EJA96_20070 PF00990 Diguanylate cyclase, GGDEF domain EJA96_20070 PF00563 EAL domain EJA96_20070 PF00360 Phytochrome region EJA96_20075 PF00270 DEAD/DEAH box helicase EJA96_20075 PF09382 RQC domain EJA96_20075 PF00271 Helicase conserved C-terminal domain EJA96_20075 PF00570 HRDC domain EJA96_20075 PF16124 RecQ zinc-binding EJA96_20085 PF00072 Response regulator receiver domain EJA96_20085 PF00486 Transcriptional regulatory protein, C terminal EJA96_20090 PF13466 STAS domain EJA96_20095 PF01739 CheR methyltransferase, SAM binding domain EJA96_20095 PF03705 CheR methyltransferase, all-alpha domain EJA96_20100 PF01584 CheW-like domain EJA96_20100 PF00072 Response regulator receiver domain EJA96_20120 PF07317 Flagellar regulator YcgR EJA96_20120 PF07238 PilZ domain EJA96_20130 PF07690 Major Facilitator Superfamily EJA96_20135 PF00120 Glutamine synthetase, catalytic domain EJA96_20140 PF00291 Pyridoxal-phosphate dependent enzyme EJA96_20145 PF00892 EamA-like transporter family EJA96_20170 PF03861 ANTAR domain EJA96_20180 PF07724 AAA domain (Cdc48 subfamily) EJA96_20180 PF10431 C-terminal, D2-small domain, of ClpB protein EJA96_20185 PF00795 Carbon-nitrogen hydrolase EJA96_20220 PF12706 Beta-lactamase superfamily domain EJA96_20230 PF07969 Amidohydrolase family EJA96_20235 PF00005 ABC transporter EJA96_20240 PF00005 ABC transporter EJA96_20245 PF06007 Phosphonate metabolism protein PhnJ EJA96_20250 PF05861 Bacterial phosphonate metabolism protein (PhnI) EJA96_20260 PF06754 Phosphonate metabolism protein PhnG EJA96_20265 PF00392 Bacterial regulatory proteins, gntR family EJA96_20265 PF07702 UTRA domain EJA96_20270 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_20280 PF00005 ABC transporter EJA96_20300 PF01980 tRNA-methyltransferase O EJA96_20300 PF18389 TrmO C-terminal domain EJA96_20315 PF12801 4Fe-4S binding domain EJA96_20315 PF04205 FMN-binding domain EJA96_20325 PF05048 Periplasmic copper-binding protein (NosD) EJA96_20330 PF00005 ABC transporter EJA96_20335 PF12679 ABC-2 family transporter protein EJA96_20345 PF00175 Oxidoreductase NAD-binding domain EJA96_20345 PF00970 Oxidoreductase FAD-binding domain EJA96_20350 PF03466 LysR substrate binding domain EJA96_20350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_20375 PF06146 Phosphate-starvation-inducible E EJA96_20385 PF02321 Outer membrane efflux protein EJA96_20390 PF00529 HlyD membrane-fusion protein of T1SS EJA96_20400 PF06438 Heme-binding protein A (HasA) EJA96_20405 PF07715 TonB-dependent Receptor Plug Domain EJA96_20405 PF00593 TonB dependent receptor EJA96_20445 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EJA96_20445 PF02817 e3 binding domain EJA96_20445 PF00364 Biotin-requiring enzyme EJA96_20450 PF02780 Transketolase, C-terminal domain EJA96_20450 PF02779 Transketolase, pyrimidine binding domain EJA96_20455 PF00676 Dehydrogenase E1 component EJA96_20460 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EJA96_20460 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EJA96_20465 PF13369 Transglutaminase-like superfamily EJA96_20475 PF07044 Protein of unknown function (DUF1329) EJA96_20500 PF00378 Enoyl-CoA hydratase/isomerase EJA96_20505 PF00106 short chain dehydrogenase EJA96_20515 PF12697 Alpha/beta hydrolase family EJA96_20520 PF00596 Class II Aldolase and Adducin N-terminal domain EJA96_20525 PF04172 LrgB-like family EJA96_20535 PF03466 LysR substrate binding domain EJA96_20535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_20540 PF00258 Flavodoxin EJA96_20555 PF01227 GTP cyclohydrolase I EJA96_20560 PF02152 Dihydroneopterin aldolase EJA96_20575 PF03459 TOBE domain EJA96_20575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_20580 PF00005 ABC transporter EJA96_20590 PF00296 Luciferase-like monooxygenase EJA96_20595 PF09084 NMT1/THI5 like EJA96_20600 PF03358 NADPH-dependent FMN reductase EJA96_20605 PF00005 ABC transporter EJA96_20610 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_20615 PF09084 NMT1/THI5 like EJA96_20620 PF10417 C-terminal domain of 1-Cys peroxiredoxin EJA96_20620 PF00578 AhpC/TSA family EJA96_20630 PF06039 Malate:quinone oxidoreductase (Mqo) EJA96_20635 PF04337 Protein of unknown function, DUF480 EJA96_20640 PF02803 Thiolase, C-terminal domain EJA96_20640 PF00108 Thiolase, N-terminal domain EJA96_20645 PF03976 Polyphosphate kinase 2 (PPK2) EJA96_20660 PF01925 Sulfite exporter TauE/SafE EJA96_20670 PF13537 Glutamine amidotransferase domain EJA96_20670 PF00733 Asparagine synthase EJA96_20680 PF05343 M42 glutamyl aminopeptidase EJA96_20685 PF01627 Hpt domain EJA96_20685 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EJA96_20685 PF00072 Response regulator receiver domain EJA96_20685 PF00672 HAMP domain EJA96_20685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_20685 PF00512 His Kinase A (phospho-acceptor) domain EJA96_20690 PF06794 Uncharacterised protein family (UPF0270) EJA96_20710 PF07690 Major Facilitator Superfamily EJA96_20715 PF00924 Mechanosensitive ion channel EJA96_20720 PF01872 RibD C-terminal domain EJA96_20730 PF00390 Malic enzyme, N-terminal domain EJA96_20730 PF03949 Malic enzyme, NAD binding domain EJA96_20740 PF00877 NlpC/P60 family EJA96_20750 PF00892 EamA-like transporter family EJA96_20755 PF00497 Bacterial extracellular solute-binding proteins, family 3 EJA96_20760 PF00765 Autoinducer synthase EJA96_20765 PF00196 Bacterial regulatory proteins, luxR family EJA96_20765 PF03472 Autoinducer binding domain EJA96_20775 PF00561 alpha/beta hydrolase fold EJA96_20785 PF00692 dUTPase EJA96_20790 PF10609 NUBPL iron-transfer P-loop NTPase EJA96_20795 PF01588 Putative tRNA binding domain EJA96_20795 PF09334 tRNA synthetases class I (M) EJA96_20815 PF16671 Actin cross-linking domain EJA96_20815 PF04717 Type VI secretion system, phage-baseplate injector EJA96_20830 PF02508 Rnf-Nqr subunit, membrane protein EJA96_20835 PF04060 Putative Fe-S cluster EJA96_20845 PF03116 NQR2, RnfD, RnfE family EJA96_20850 PF04205 FMN-binding domain EJA96_20855 PF02508 Rnf-Nqr subunit, membrane protein EJA96_20860 PF10576 Iron-sulfur binding domain of endonuclease III EJA96_20860 PF00633 Helix-hairpin-helix motif EJA96_20860 PF00730 HhH-GPD superfamily base excision DNA repair protein EJA96_20875 PF00206 Lyase EJA96_20875 PF10397 Adenylosuccinate lyase C-terminus EJA96_20880 PF00206 Lyase EJA96_20880 PF10397 Adenylosuccinate lyase C-terminus EJA96_20910 PF00873 AcrB/AcrD/AcrF family EJA96_20915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EJA96_20915 PF00529 HlyD membrane-fusion protein of T1SS EJA96_20920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EJA96_20925 PF00764 Arginosuccinate synthase EJA96_20935 PF01979 Amidohydrolase family EJA96_20940 PF00929 Exonuclease EJA96_20945 PF00578 AhpC/TSA family EJA96_20945 PF10417 C-terminal domain of 1-Cys peroxiredoxin EJA96_20950 PF04324 BFD-like [2Fe-2S] binding domain EJA96_20955 PF00210 Ferritin-like domain EJA96_20960 PF07690 Major Facilitator Superfamily EJA96_20965 PF00462 Glutaredoxin EJA96_20970 PF01568 Molydopterin dinucleotide binding domain EJA96_20970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EJA96_20970 PF00384 Molybdopterin oxidoreductase EJA96_20975 PF00082 Subtilase family EJA96_20975 PF12951 Passenger-associated-transport-repeat EJA96_20975 PF03797 Autotransporter beta-domain EJA96_20985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EJA96_20985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EJA96_20990 PF00005 ABC transporter EJA96_20990 PF08402 TOBE domain EJA96_20995 PF03883 Peroxide stress protein YaaA EJA96_21000 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EJA96_21000 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EJA96_21000 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EJA96_21010 PF07238 PilZ domain EJA96_21020 PF13372 Alginate export EJA96_21035 PF05426 Alginate lyase EJA96_21050 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX EJA96_21055 PF11182 Alginate O-acetyl transferase AlgF EJA96_21060 PF01050 Mannose-6-phosphate isomerase EJA96_21060 PF00483 Nucleotidyl transferase EJA96_21065 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EJA96_21070 PF00535 Glycosyl transferase family 2 EJA96_21075 PF00551 Formyl transferase EJA96_21075 PF02911 Formyl transferase, C-terminal domain EJA96_21075 PF01370 NAD dependent epimerase/dehydratase family EJA96_21090 PF00892 EamA-like transporter family EJA96_21095 PF00893 Small Multidrug Resistance protein EJA96_21100 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EJA96_21100 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EJA96_21100 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EJA96_21105 PF02378 Phosphotransferase system, EIIC EJA96_21105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EJA96_21110 PF00294 pfkB family carbohydrate kinase EJA96_21120 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EJA96_21120 PF00356 Bacterial regulatory proteins, lacI family EJA96_21125 PF01026 TatD related DNase EJA96_21135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_21135 PF03466 LysR substrate binding domain EJA96_21145 PF08240 Alcohol dehydrogenase GroES-like domain EJA96_21145 PF00107 Zinc-binding dehydrogenase EJA96_21150 PF13193 AMP-binding enzyme C-terminal domain EJA96_21150 PF00501 AMP-binding enzyme EJA96_21150 PF16177 Acetyl-coenzyme A synthetase N-terminus EJA96_21155 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EJA96_21155 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EJA96_21160 PF00171 Aldehyde dehydrogenase family EJA96_21165 PF12833 Helix-turn-helix domain EJA96_21165 PF02311 AraC-like ligand binding domain EJA96_21175 PF07690 Major Facilitator Superfamily EJA96_21215 PF02567 Phenazine biosynthesis-like protein EJA96_21220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EJA96_21220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EJA96_21225 PF04073 Aminoacyl-tRNA editing domain EJA96_21230 PF00230 Major intrinsic protein EJA96_21235 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EJA96_21235 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EJA96_21245 PF00455 DeoR C terminal sensor domain EJA96_21245 PF08220 DeoR-like helix-turn-helix domain EJA96_21250 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EJA96_21250 PF01266 FAD dependent oxidoreductase EJA96_21255 PF06942 GlpM protein EJA96_21260 PF00561 alpha/beta hydrolase fold EJA96_21265 PF03466 LysR substrate binding domain EJA96_21265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_21270 PF03573 outer membrane porin, OprD family EJA96_21285 PF00378 Enoyl-CoA hydratase/isomerase EJA96_21290 PF02515 CoA-transferase family III EJA96_21295 PF18158 Adaptive response protein AidB N-terminal domain EJA96_21295 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_21295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_21300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_21300 PF03466 LysR substrate binding domain EJA96_21310 PF00083 Sugar (and other) transporter EJA96_21310 PF07690 Major Facilitator Superfamily EJA96_21315 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EJA96_21315 PF02805 Metal binding domain of Ada EJA96_21315 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EJA96_21315 PF12833 Helix-turn-helix domain EJA96_21320 PF00324 Amino acid permease EJA96_21325 PF00795 Carbon-nitrogen hydrolase EJA96_21335 PF00444 Ribosomal protein L36 EJA96_21340 PF01197 Ribosomal protein L31 EJA96_21345 PF01645 Conserved region in glutamate synthase EJA96_21350 PF01219 Prokaryotic diacylglycerol kinase EJA96_21355 PF00196 Bacterial regulatory proteins, luxR family EJA96_21355 PF00072 Response regulator receiver domain EJA96_21370 PF00005 ABC transporter EJA96_21370 PF08402 TOBE domain EJA96_21375 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_21380 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_21385 PF13416 Bacterial extracellular solute-binding protein EJA96_21395 PF12843 Putative quorum-sensing-regulated virulence factor EJA96_21400 PF09364 XFP N-terminal domain EJA96_21400 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase EJA96_21400 PF09363 XFP C-terminal domain EJA96_21405 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EJA96_21405 PF00753 Metallo-beta-lactamase superfamily EJA96_21405 PF10996 Beta-Casp domain EJA96_21415 PF02631 RecX family EJA96_21420 PF00154 recA bacterial DNA recombination protein EJA96_21425 PF02464 Competence-damaged protein EJA96_21440 PF05188 MutS domain II EJA96_21440 PF00488 MutS domain V EJA96_21440 PF05190 MutS family domain IV EJA96_21440 PF05192 MutS domain III EJA96_21440 PF01624 MutS domain I EJA96_21445 PF00037 4Fe-4S binding domain EJA96_21445 PF11953 Domain of unknown function (DUF3470) EJA96_21450 PF04545 Sigma-70, region 4 EJA96_21450 PF04539 Sigma-70 region 3 EJA96_21450 PF04542 Sigma-70 region 2 EJA96_21450 PF00140 Sigma-70 factor, region 1.2 EJA96_21455 PF01551 Peptidase family M23 EJA96_21455 PF01476 LysM domain EJA96_21465 PF01975 Survival protein SurE EJA96_21470 PF01142 tRNA pseudouridine synthase D (TruD) EJA96_21475 PF02542 YgbB family EJA96_21480 PF00756 Putative esterase EJA96_21485 PF00107 Zinc-binding dehydrogenase EJA96_21485 PF08240 Alcohol dehydrogenase GroES-like domain EJA96_21490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_21490 PF03466 LysR substrate binding domain EJA96_21495 PF04143 Sulphur transport EJA96_21510 PF04977 Septum formation initiator EJA96_21515 PF00113 Enolase, C-terminal TIM barrel domain EJA96_21515 PF03952 Enolase, N-terminal domain EJA96_21520 PF00793 DAHP synthetase I family EJA96_21525 PF06418 CTP synthase N-terminus EJA96_21525 PF00117 Glutamine amidotransferase class-I EJA96_21530 PF11734 TilS substrate C-terminal domain EJA96_21530 PF09179 TilS substrate binding domain EJA96_21530 PF01171 PP-loop family EJA96_21535 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EJA96_21540 PF01336 OB-fold nucleic acid binding domain EJA96_21540 PF07733 Bacterial DNA polymerase III alpha NTPase domain EJA96_21540 PF02811 PHP domain EJA96_21540 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EJA96_21540 PF14579 Helix-hairpin-helix motif EJA96_21545 PF01235 Sodium:alanine symporter family EJA96_21550 PF01351 Ribonuclease HII EJA96_21555 PF02684 Lipid-A-disaccharide synthetase EJA96_21560 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EJA96_21560 PF00132 Bacterial transferase hexapeptide (six repeats) EJA96_21565 PF07977 FabA-like domain EJA96_21570 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EJA96_21570 PF00132 Bacterial transferase hexapeptide (six repeats) EJA96_21575 PF03938 Outer membrane protein (OmpH-like) EJA96_21580 PF01103 Surface antigen EJA96_21580 PF07244 Surface antigen variable number repeat EJA96_21585 PF13180 PDZ domain EJA96_21585 PF17820 PDZ domain EJA96_21585 PF02163 Peptidase family M50 EJA96_21590 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EJA96_21590 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EJA96_21590 PF13288 DXP reductoisomerase C-terminal domain EJA96_21600 PF01255 Putative undecaprenyl diphosphate synthase EJA96_21605 PF01765 Ribosome recycling factor EJA96_21610 PF00696 Amino acid kinase family EJA96_21615 PF00889 Elongation factor TS EJA96_21620 PF00318 Ribosomal protein S2 EJA96_21625 PF00557 Metallopeptidase family M24 EJA96_21630 PF08335 GlnD PII-uridylyltransferase EJA96_21630 PF01966 HD domain EJA96_21630 PF01842 ACT domain EJA96_21630 PF01909 Nucleotidyltransferase domain EJA96_21635 PF00155 Aminotransferase class I and II EJA96_21640 PF00999 Sodium/hydrogen exchanger family EJA96_21660 PF03960 ArsC family EJA96_21665 PF01810 LysE type translocator EJA96_21670 PF14602 Hexapeptide repeat of succinyl-transferase EJA96_21670 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle EJA96_21675 PF00266 Aminotransferase class-V EJA96_21680 PF02657 Fe-S metabolism associated domain EJA96_21700 PF00005 ABC transporter EJA96_21705 PF01553 Acyltransferase EJA96_21720 PF00873 AcrB/AcrD/AcrF family EJA96_21740 PF04445 Putative SAM-dependent methyltransferase EJA96_21755 PF01904 Protein of unknown function DUF72 EJA96_21765 PF00814 Glycoprotease family EJA96_21770 PF05191 Adenylate kinase, active site lid EJA96_21775 PF00311 Phosphoenolpyruvate carboxylase EJA96_21785 PF13411 MerR HTH family regulatory protein EJA96_21790 PF00403 Heavy-metal-associated domain EJA96_21800 PF00691 OmpA family EJA96_21805 PF01661 Macro domain EJA96_21815 PF12146 Serine aminopeptidase, S33 EJA96_21815 PF11713 Peptidase C80 family EJA96_21815 PF16671 Actin cross-linking domain EJA96_21815 PF11647 Membrane Localization Domain EJA96_21815 PF07634 RtxA repeat EJA96_21840 PF01336 OB-fold nucleic acid binding domain EJA96_21840 PF00152 tRNA synthetases class II (D, K and N) EJA96_21855 PF00072 Response regulator receiver domain EJA96_21855 PF01339 CheB methylesterase EJA96_21870 PF01739 CheR methyltransferase, SAM binding domain EJA96_21880 PF00672 HAMP domain EJA96_21880 PF12729 Four helix bundle sensory module for signal transduction EJA96_21880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_21885 PF00083 Sugar (and other) transporter EJA96_21885 PF07690 Major Facilitator Superfamily EJA96_21890 PF00732 GMC oxidoreductase EJA96_21890 PF05199 GMC oxidoreductase EJA96_21895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_21895 PF03466 LysR substrate binding domain EJA96_22015 PF04233 Phage Mu protein F like protein EJA96_22025 PF03237 Terminase-like family EJA96_22055 PF01464 Transglycosylase SLT domain EJA96_22055 PF14718 Soluble lytic murein transglycosylase L domain EJA96_22115 PF00005 ABC transporter EJA96_22180 PF00196 Bacterial regulatory proteins, luxR family EJA96_22180 PF00072 Response regulator receiver domain EJA96_22195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EJA96_22225 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EJA96_22230 PF07504 Fungalysin/Thermolysin Propeptide Motif EJA96_22230 PF01447 Thermolysin metallopeptidase, catalytic domain EJA96_22230 PF02868 Thermolysin metallopeptidase, alpha-helical domain EJA96_22230 PF03413 Peptidase propeptide and YPEB domain EJA96_22235 PF01368 DHH family EJA96_22235 PF02272 DHHA1 domain EJA96_22235 PF17768 RecJ OB domain EJA96_22240 PF07152 YaeQ protein EJA96_22250 PF05491 RuvB C-terminal winged helix domain EJA96_22250 PF05496 Holliday junction DNA helicase RuvB P-loop domain EJA96_22250 PF17864 RuvB AAA lid domain EJA96_22275 PF02515 CoA-transferase family III EJA96_22290 PF00291 Pyridoxal-phosphate dependent enzyme EJA96_22290 PF14821 Threonine synthase N terminus EJA96_22295 PF01842 ACT domain EJA96_22295 PF00742 Homoserine dehydrogenase EJA96_22295 PF03447 Homoserine dehydrogenase, NAD binding domain EJA96_22300 PF10411 Disulfide bond isomerase protein N-terminus EJA96_22300 PF13098 Thioredoxin-like domain EJA96_22305 PF00589 Phage integrase family EJA96_22305 PF02899 Phage integrase, N-terminal SAM-like domain EJA96_22320 PF03061 Thioesterase superfamily EJA96_22325 PF01245 Ribosomal protein L19 EJA96_22330 PF01746 tRNA (Guanine-1)-methyltransferase EJA96_22335 PF05239 PRC-barrel domain EJA96_22335 PF01782 RimM N-terminal domain EJA96_22340 PF00886 Ribosomal protein S16 EJA96_22345 PF02881 SRP54-type protein, helical bundle domain EJA96_22345 PF00448 SRP54-type protein, GTPase domain EJA96_22345 PF02978 Signal peptide binding domain EJA96_22355 PF03471 Transporter associated domain EJA96_22355 PF00571 CBS domain EJA96_22355 PF01595 Cyclin M transmembrane N-terminal domain EJA96_22365 PF00083 Sugar (and other) transporter EJA96_22365 PF07690 Major Facilitator Superfamily EJA96_22375 PF02222 ATP-grasp domain EJA96_22375 PF01370 NAD dependent epimerase/dehydratase family EJA96_22385 PF00132 Bacterial transferase hexapeptide (six repeats) EJA96_22390 PF00293 NUDIX domain EJA96_22395 PF09297 NADH pyrophosphatase zinc ribbon domain EJA96_22395 PF00293 NUDIX domain EJA96_22405 PF00392 Bacterial regulatory proteins, gntR family EJA96_22405 PF07702 UTRA domain EJA96_22410 PF01979 Amidohydrolase family EJA96_22415 PF01380 SIS domain EJA96_22425 PF00367 phosphotransferase system, EIIB EJA96_22425 PF02378 Phosphotransferase system, EIIC EJA96_22425 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EJA96_22430 PF01784 NIF3 (NGG1p interacting factor 3) EJA96_22440 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EJA96_22440 PF02769 AIR synthase related protein, C-terminal domain EJA96_22440 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EJA96_22445 PF01464 Transglycosylase SLT domain EJA96_22445 PF00497 Bacterial extracellular solute-binding proteins, family 3 EJA96_22465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EJA96_22470 PF07732 Multicopper oxidase EJA96_22470 PF07731 Multicopper oxidase EJA96_22470 PF00394 Multicopper oxidase EJA96_22475 PF00117 Glutamine amidotransferase class-I EJA96_22475 PF00958 GMP synthase C terminal domain EJA96_22475 PF02540 NAD synthase EJA96_22480 PF00478 IMP dehydrogenase / GMP reductase domain EJA96_22480 PF00571 CBS domain EJA96_22485 PF00196 Bacterial regulatory proteins, luxR family EJA96_22485 PF00072 Response regulator receiver domain EJA96_22500 PF00850 Histone deacetylase domain EJA96_22510 PF03466 LysR substrate binding domain EJA96_22510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_22515 PF13742 OB-fold nucleic acid binding domain EJA96_22515 PF02601 Exonuclease VII, large subunit EJA96_22520 PF03466 LysR substrate binding domain EJA96_22520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_22525 PF03480 Bacterial extracellular solute-binding protein, family 7 EJA96_22535 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EJA96_22545 PF01965 DJ-1/PfpI family EJA96_22545 PF12833 Helix-turn-helix domain EJA96_22550 PF00857 Isochorismatase family EJA96_22560 PF04314 Copper chaperone PCu(A)C EJA96_22570 PF08525 Opacity-associated protein A N-terminal motif EJA96_22570 PF01551 Peptidase family M23 EJA96_22570 PF01476 LysM domain EJA96_22585 PF07715 TonB-dependent Receptor Plug Domain EJA96_22585 PF00593 TonB dependent receptor EJA96_22595 PF08502 LeuA allosteric (dimerisation) domain EJA96_22595 PF00682 HMGL-like EJA96_22610 PF00248 Aldo/keto reductase family EJA96_22620 PF00795 Carbon-nitrogen hydrolase EJA96_22625 PF00155 Aminotransferase class I and II EJA96_22630 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EJA96_22630 PF01926 50S ribosome-binding GTPase EJA96_22635 PF13360 PQQ-like domain EJA96_22645 PF13393 Histidyl-tRNA synthetase EJA96_22645 PF03129 Anticodon binding domain EJA96_22650 PF04551 GcpE protein EJA96_22665 PF04055 Radical SAM superfamily EJA96_22670 PF00334 Nucleoside diphosphate kinase EJA96_22675 PF04384 Iron-sulphur cluster assembly EJA96_22680 PF00111 2Fe-2S iron-sulfur cluster binding domain EJA96_22685 PF00012 Hsp70 protein EJA96_22690 PF00226 DnaJ domain EJA96_22690 PF07743 HSCB C-terminal oligomerisation domain EJA96_22695 PF01521 Iron-sulphur cluster biosynthesis EJA96_22700 PF01592 NifU-like N terminal domain EJA96_22705 PF00266 Aminotransferase class-V EJA96_22710 PF02082 Transcriptional regulator EJA96_22715 PF00132 Bacterial transferase hexapeptide (six repeats) EJA96_22715 PF06426 Serine acetyltransferase, N-terminal EJA96_22720 PF00588 SpoU rRNA Methylase family EJA96_22725 PF00459 Inositol monophosphatase family EJA96_22730 PF05433 Glycine zipper 2TM domain EJA96_22735 PF02355 Protein export membrane protein EJA96_22735 PF07549 SecD/SecF GG Motif EJA96_22740 PF07549 SecD/SecF GG Motif EJA96_22740 PF02355 Protein export membrane protein EJA96_22740 PF13721 SecD export protein N-terminal TM region EJA96_22745 PF02699 Preprotein translocase subunit EJA96_22750 PF01702 Queuine tRNA-ribosyltransferase EJA96_22755 PF02547 Queuosine biosynthesis protein EJA96_22765 PF00563 EAL domain EJA96_22765 PF12792 CSS motif domain associated with EAL EJA96_22775 PF03739 Lipopolysaccharide export system permease LptF/LptG EJA96_22780 PF03739 Lipopolysaccharide export system permease LptF/LptG EJA96_22790 PF12833 Helix-turn-helix domain EJA96_22790 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EJA96_22795 PF00883 Cytosol aminopeptidase family, catalytic domain EJA96_22795 PF02789 Cytosol aminopeptidase family, N-terminal domain EJA96_22800 PF04364 DNA polymerase III chi subunit, HolC EJA96_22810 PF10458 Valyl tRNA synthetase tRNA binding arm EJA96_22810 PF08264 Anticodon-binding domain of tRNA EJA96_22810 PF00133 tRNA synthetases class I (I, L, M and V) EJA96_22825 PF02653 Branched-chain amino acid transport system / permease component EJA96_22830 PF00005 ABC transporter EJA96_22835 PF02080 TrkA-C domain EJA96_22835 PF03600 Citrate transporter EJA96_22840 PF05971 RNA methyltransferase EJA96_22865 PF00107 Zinc-binding dehydrogenase EJA96_22865 PF08240 Alcohol dehydrogenase GroES-like domain EJA96_22875 PF03466 LysR substrate binding domain EJA96_22875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_22895 PF04245 37-kD nucleoid-associated bacterial protein EJA96_22915 PF00132 Bacterial transferase hexapeptide (six repeats) EJA96_22920 PF01541 GIY-YIG catalytic domain EJA96_22935 PF01066 CDP-alcohol phosphatidyltransferase EJA96_22940 PF00497 Bacterial extracellular solute-binding proteins, family 3 EJA96_22945 PF02230 Phospholipase/Carboxylesterase EJA96_22950 PF00501 AMP-binding enzyme EJA96_22950 PF13193 AMP-binding enzyme C-terminal domain EJA96_22960 PF00270 DEAD/DEAH box helicase EJA96_22960 PF00271 Helicase conserved C-terminal domain EJA96_22965 PF02423 Ornithine cyclodeaminase/mu-crystallin family EJA96_22975 PF08348 YheO-like PAS domain EJA96_22975 PF13309 HTH domain EJA96_22980 PF00497 Bacterial extracellular solute-binding proteins, family 3 EJA96_22995 PF06463 Molybdenum Cofactor Synthesis C EJA96_22995 PF04055 Radical SAM superfamily EJA96_23000 PF09312 SurA N-terminal domain EJA96_23005 PF02665 Nitrate reductase gamma subunit EJA96_23010 PF02613 Nitrate reductase delta subunit EJA96_23015 PF14711 Respiratory nitrate reductase beta C-terminal EJA96_23015 PF13247 4Fe-4S dicluster domain EJA96_23020 PF01568 Molydopterin dinucleotide binding domain EJA96_23020 PF14710 Respiratory nitrate reductase alpha N-terminal EJA96_23020 PF00384 Molybdopterin oxidoreductase EJA96_23025 PF07690 Major Facilitator Superfamily EJA96_23030 PF07690 Major Facilitator Superfamily EJA96_23035 PF00672 HAMP domain EJA96_23035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_23035 PF07730 Histidine kinase EJA96_23035 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term EJA96_23040 PF00072 Response regulator receiver domain EJA96_23040 PF00196 Bacterial regulatory proteins, luxR family EJA96_23055 PF08241 Methyltransferase domain EJA96_23060 PF00106 short chain dehydrogenase EJA96_23085 PF00999 Sodium/hydrogen exchanger family EJA96_23095 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_23100 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EJA96_23105 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_23110 PF00571 CBS domain EJA96_23110 PF00005 ABC transporter EJA96_23115 PF00529 HlyD membrane-fusion protein of T1SS EJA96_23115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EJA96_23125 PF04632 Fusaric acid resistance protein family EJA96_23135 PF03466 LysR substrate binding domain EJA96_23135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_23140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EJA96_23140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EJA96_23145 PF00892 EamA-like transporter family EJA96_23150 PF01965 DJ-1/PfpI family EJA96_23150 PF12833 Helix-turn-helix domain EJA96_23155 PF04542 Sigma-70 region 2 EJA96_23155 PF08281 Sigma-70, region 4 EJA96_23160 PF16220 Domain of unknown function (DUF4880) EJA96_23160 PF04773 FecR protein EJA96_23165 PF07715 TonB-dependent Receptor Plug Domain EJA96_23165 PF07660 Secretin and TonB N terminus short domain EJA96_23165 PF00593 TonB dependent receptor EJA96_23175 PF00009 Elongation factor Tu GTP binding domain EJA96_23175 PF03144 Elongation factor Tu domain 2 EJA96_23175 PF16658 Class II release factor RF3, C-terminal domain EJA96_23210 PF09423 PhoD-like phosphatase EJA96_23210 PF16655 PhoD-like phosphatase, N-terminal domain EJA96_23235 PF00994 Probable molybdopterin binding domain EJA96_23240 PF02391 MoaE protein EJA96_23245 PF02597 ThiS family EJA96_23250 PF01967 MoaC family EJA96_23270 PF13638 PIN domain EJA96_23270 PF02562 PhoH-like protein EJA96_23280 PF00403 Heavy-metal-associated domain EJA96_23285 PF00196 Bacterial regulatory proteins, luxR family EJA96_23285 PF17874 MalT-like TPR region EJA96_23290 PF07044 Protein of unknown function (DUF1329) EJA96_23305 PF13193 AMP-binding enzyme C-terminal domain EJA96_23305 PF00501 AMP-binding enzyme EJA96_23310 PF02803 Thiolase, C-terminal domain EJA96_23310 PF00108 Thiolase, N-terminal domain EJA96_23320 PF02311 AraC-like ligand binding domain EJA96_23320 PF12833 Helix-turn-helix domain EJA96_23330 PF02322 Cytochrome bd terminal oxidase subunit II EJA96_23335 PF01654 Cytochrome bd terminal oxidase subunit I EJA96_23340 PF03180 NLPA lipoprotein EJA96_23345 PF00158 Sigma-54 interaction domain EJA96_23350 PF02028 BCCT, betaine/carnitine/choline family transporter EJA96_23355 PF03169 OPT oligopeptide transporter protein EJA96_23360 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EJA96_23365 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_23370 PF00005 ABC transporter EJA96_23375 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EJA96_23385 PF00216 Bacterial DNA-binding protein EJA96_23405 PF13302 Acetyltransferase (GNAT) domain EJA96_23410 PF13302 Acetyltransferase (GNAT) domain EJA96_23415 PF00497 Bacterial extracellular solute-binding proteins, family 3 EJA96_23415 PF00072 Response regulator receiver domain EJA96_23415 PF00989 PAS fold EJA96_23415 PF01627 Hpt domain EJA96_23415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_23415 PF00512 His Kinase A (phospho-acceptor) domain EJA96_23420 PF13426 PAS domain EJA96_23420 PF00563 EAL domain EJA96_23420 PF00990 Diguanylate cyclase, GGDEF domain EJA96_23425 PF00196 Bacterial regulatory proteins, luxR family EJA96_23425 PF00072 Response regulator receiver domain EJA96_23435 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_23435 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EJA96_23440 PF00270 DEAD/DEAH box helicase EJA96_23440 PF00271 Helicase conserved C-terminal domain EJA96_23450 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) EJA96_23460 PF00296 Luciferase-like monooxygenase EJA96_23475 PF00106 short chain dehydrogenase EJA96_23505 PF16916 Dimerisation domain of Zinc Transporter EJA96_23505 PF01545 Cation efflux family EJA96_23515 PF01037 Lrp/AsnC ligand binding domain EJA96_23530 PF00849 RNA pseudouridylate synthase EJA96_23535 PF12706 Beta-lactamase superfamily domain EJA96_23540 PF01043 SecA preprotein cross-linking domain EJA96_23540 PF07516 SecA Wing and Scaffold domain EJA96_23540 PF07517 SecA DEAD-like domain EJA96_23540 PF02810 SEC-C motif EJA96_23545 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus EJA96_23545 PF01048 Phosphorylase superfamily EJA96_23555 PF18158 Adaptive response protein AidB N-terminal domain EJA96_23555 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_23555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_23565 PF00072 Response regulator receiver domain EJA96_23565 PF01627 Hpt domain EJA96_23565 PF00512 His Kinase A (phospho-acceptor) domain EJA96_23565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_23570 PF08543 Phosphomethylpyrimidine kinase EJA96_23580 PF00202 Aminotransferase class-III EJA96_23595 PF04055 Radical SAM superfamily EJA96_23595 PF01938 TRAM domain EJA96_23595 PF00919 Uncharacterized protein family UPF0004 EJA96_23600 PF02562 PhoH-like protein EJA96_23605 PF02130 Uncharacterized protein family UPF0054 EJA96_23610 PF03471 Transporter associated domain EJA96_23610 PF00571 CBS domain EJA96_23615 PF00795 Carbon-nitrogen hydrolase EJA96_23620 PF02698 DUF218 domain EJA96_23630 PF13603 Leucyl-tRNA synthetase, Domain 2 EJA96_23630 PF09334 tRNA synthetases class I (M) EJA96_23630 PF08264 Anticodon-binding domain of tRNA EJA96_23630 PF00133 tRNA synthetases class I (I, L, M and V) EJA96_23665 PF03466 LysR substrate binding domain EJA96_23665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_23670 PF04055 Radical SAM superfamily EJA96_23670 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EJA96_23675 PF03099 Biotin/lipoate A/B protein ligase family EJA96_23680 PF04359 Protein of unknown function (DUF493) EJA96_23685 PF00768 D-alanyl-D-alanine carboxypeptidase EJA96_23685 PF07943 Penicillin-binding protein 5, C-terminal domain EJA96_23690 PF05036 Sporulation related domain EJA96_23690 PF03330 Lytic transglycolase EJA96_23695 PF13406 Transglycosylase SLT domain EJA96_23700 PF01098 Cell cycle protein EJA96_23705 PF00905 Penicillin binding protein transpeptidase domain EJA96_23705 PF03717 Penicillin-binding Protein dimerisation domain EJA96_23710 PF02590 Predicted SPOUT methyltransferase EJA96_23720 PF01467 Cytidylyltransferase-like EJA96_23725 PF00171 Aldehyde dehydrogenase family EJA96_23740 PF02245 Methylpurine-DNA glycosylase (MPG) EJA96_23745 PF09335 SNARE associated Golgi protein EJA96_23755 PF04172 LrgB-like family EJA96_23760 PF03788 LrgA family EJA96_23775 PF13460 NAD(P)H-binding EJA96_23785 PF02441 Flavoprotein EJA96_23790 PF02875 Mur ligase family, glutamate ligase domain EJA96_23790 PF08245 Mur ligase middle domain EJA96_23790 PF01225 Mur ligase family, catalytic domain EJA96_23800 PF00171 Aldehyde dehydrogenase family EJA96_23805 PF13520 Amino acid permease EJA96_23810 PF06751 Ethanolamine ammonia lyase large subunit (EutB) EJA96_23815 PF05985 Ethanolamine ammonia-lyase light chain (EutC) EJA96_23820 PF00583 Acetyltransferase (GNAT) family EJA96_23835 PF09335 SNARE associated Golgi protein EJA96_23840 PF06167 Glucose-regulated metallo-peptidase M90 EJA96_23845 PF00719 Inorganic pyrophosphatase EJA96_23850 PF00486 Transcriptional regulatory protein, C terminal EJA96_23850 PF00072 Response regulator receiver domain EJA96_23860 PF00230 Major intrinsic protein EJA96_23870 PF00672 HAMP domain EJA96_23870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_23870 PF00512 His Kinase A (phospho-acceptor) domain EJA96_23870 PF00989 PAS fold EJA96_23870 PF18698 Histidine kinase sensor domain EJA96_23875 PF00005 ABC transporter EJA96_23895 PF13378 Enolase C-terminal domain-like EJA96_23900 PF02609 Exonuclease VII small subunit EJA96_23905 PF00348 Polyprenyl synthetase EJA96_23910 PF02779 Transketolase, pyrimidine binding domain EJA96_23910 PF02780 Transketolase, C-terminal domain EJA96_23910 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EJA96_23915 PF01497 Periplasmic binding protein EJA96_23925 PF00925 GTP cyclohydrolase II EJA96_23940 PF04608 Phosphatidylglycerophosphatase A EJA96_23950 PF01029 NusB family EJA96_23955 PF00885 6,7-dimethyl-8-ribityllumazine synthase EJA96_23960 PF00925 GTP cyclohydrolase II EJA96_23960 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EJA96_23965 PF00677 Lumazine binding domain EJA96_23970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EJA96_23970 PF01872 RibD C-terminal domain EJA96_23975 PF03477 ATP cone domain EJA96_23995 PF00085 Thioredoxin EJA96_24010 PF00005 ABC transporter EJA96_24025 PF03922 OmpW family EJA96_24030 PF04247 Invasion gene expression up-regulator, SirB EJA96_24035 PF16363 GDP-mannose 4,6 dehydratase EJA96_24045 PF12852 Cupin EJA96_24045 PF12833 Helix-turn-helix domain EJA96_24055 PF13520 Amino acid permease EJA96_24060 PF00171 Aldehyde dehydrogenase family EJA96_24080 PF09856 Predicted transcriptional regulator (DUF2083) EJA96_24080 PF06114 IrrE N-terminal-like domain EJA96_24080 PF01381 Helix-turn-helix EJA96_24085 PF07993 Male sterility protein EJA96_24085 PF00550 Phosphopantetheine attachment site EJA96_24085 PF00668 Condensation domain EJA96_24085 PF00501 AMP-binding enzyme EJA96_24085 PF13193 AMP-binding enzyme C-terminal domain EJA96_24090 PF00106 short chain dehydrogenase EJA96_24095 PF00072 Response regulator receiver domain EJA96_24095 PF00196 Bacterial regulatory proteins, luxR family EJA96_24105 PF05860 haemagglutination activity domain EJA96_24110 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EJA96_24110 PF02753 Pili assembly chaperone PapD, C-terminal domain EJA96_24115 PF13953 PapC C-terminal domain EJA96_24115 PF13954 PapC N-terminal domain EJA96_24115 PF00577 Outer membrane usher protein EJA96_24120 PF02753 Pili assembly chaperone PapD, C-terminal domain EJA96_24120 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain EJA96_24130 PF17409 MoaF C-terminal domain EJA96_24130 PF10703 MoaF N-terminal domain EJA96_24135 PF00202 Aminotransferase class-III EJA96_24150 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal EJA96_24150 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal EJA96_24155 PF01613 Flavin reductase like domain EJA96_24175 PF07690 Major Facilitator Superfamily EJA96_24195 PF05199 GMC oxidoreductase EJA96_24195 PF00732 GMC oxidoreductase EJA96_24205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_24205 PF03466 LysR substrate binding domain EJA96_24210 PF01966 HD domain EJA96_24210 PF11871 Domain of unknown function (DUF3391) EJA96_24220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_24220 PF03466 LysR substrate binding domain EJA96_24225 PF00144 Beta-lactamase EJA96_24240 PF07690 Major Facilitator Superfamily EJA96_24250 PF11892 Domain of unknown function (DUF3412) EJA96_24250 PF03641 Possible lysine decarboxylase EJA96_24250 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases EJA96_24260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_24260 PF08446 PAS fold EJA96_24260 PF00512 His Kinase A (phospho-acceptor) domain EJA96_24260 PF00360 Phytochrome region EJA96_24260 PF01590 GAF domain EJA96_24270 PF01636 Phosphotransferase enzyme family EJA96_24280 PF01557 Fumarylacetoacetate (FAA) hydrolase family EJA96_24285 PF01557 Fumarylacetoacetate (FAA) hydrolase family EJA96_24290 PF00171 Aldehyde dehydrogenase family EJA96_24295 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase EJA96_24300 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase EJA96_24305 PF07690 Major Facilitator Superfamily EJA96_24310 PF01557 Fumarylacetoacetate (FAA) hydrolase family EJA96_24315 PF03328 HpcH/HpaI aldolase/citrate lyase family EJA96_24325 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EJA96_24325 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EJA96_24330 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EJA96_24330 PF13746 4Fe-4S dicluster domain EJA96_24330 PF12801 4Fe-4S binding domain EJA96_24335 PF00155 Aminotransferase class I and II EJA96_24335 PF00392 Bacterial regulatory proteins, gntR family EJA96_24340 PF00115 Cytochrome C and Quinol oxidase polypeptide I EJA96_24350 PF01047 MarR family EJA96_24355 PF07690 Major Facilitator Superfamily EJA96_24360 PF03573 outer membrane porin, OprD family EJA96_24395 PF03412 Peptidase C39 family EJA96_24395 PF00005 ABC transporter EJA96_24395 PF00664 ABC transporter transmembrane region EJA96_24420 PF00158 Sigma-54 interaction domain EJA96_24420 PF02954 Bacterial regulatory protein, Fis family EJA96_24420 PF01590 GAF domain EJA96_24435 PF00676 Dehydrogenase E1 component EJA96_24445 PF00364 Biotin-requiring enzyme EJA96_24445 PF00561 alpha/beta hydrolase fold EJA96_24450 PF00107 Zinc-binding dehydrogenase EJA96_24450 PF08240 Alcohol dehydrogenase GroES-like domain EJA96_24455 PF08239 Bacterial SH3 domain EJA96_24465 PF07715 TonB-dependent Receptor Plug Domain EJA96_24475 PF00005 ABC transporter EJA96_24480 PF01497 Periplasmic binding protein EJA96_24500 PF01425 Amidase EJA96_24525 PF00248 Aldo/keto reductase family EJA96_24530 PF00593 TonB dependent receptor EJA96_24530 PF07715 TonB-dependent Receptor Plug Domain EJA96_24530 PF07660 Secretin and TonB N terminus short domain EJA96_24535 PF02082 Transcriptional regulator EJA96_24540 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_24545 PF01965 DJ-1/PfpI family EJA96_24555 PF01042 Endoribonuclease L-PSP EJA96_24560 PF03466 LysR substrate binding domain EJA96_24560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_24570 PF05698 Bacterial trigger factor protein (TF) C-terminus EJA96_24580 PF13649 Methyltransferase domain EJA96_24585 PF03573 outer membrane porin, OprD family EJA96_24590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EJA96_24590 PF00205 Thiamine pyrophosphate enzyme, central domain EJA96_24590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EJA96_24620 PF07729 FCD domain EJA96_24620 PF00392 Bacterial regulatory proteins, gntR family EJA96_24630 PF00083 Sugar (and other) transporter EJA96_24635 PF00701 Dihydrodipicolinate synthetase family EJA96_24650 PF00072 Response regulator receiver domain EJA96_24650 PF00196 Bacterial regulatory proteins, luxR family EJA96_24660 PF13193 AMP-binding enzyme C-terminal domain EJA96_24660 PF00501 AMP-binding enzyme EJA96_24665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_24665 PF12806 Acetyl-CoA dehydrogenase C-terminal like EJA96_24665 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_24665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_24670 PF00753 Metallo-beta-lactamase superfamily EJA96_24680 PF03060 Nitronate monooxygenase EJA96_24690 PF10282 Lactonase, 7-bladed beta-propeller EJA96_24700 PF13533 Biotin-lipoyl like EJA96_24705 PF00873 AcrB/AcrD/AcrF family EJA96_24715 PF00891 O-methyltransferase domain EJA96_24715 PF16864 Dimerisation domain EJA96_24725 PF03284 Phenazine biosynthesis protein A/B EJA96_24730 PF03284 Phenazine biosynthesis protein A/B EJA96_24735 PF01474 Class-II DAHP synthetase family EJA96_24740 PF00857 Isochorismatase family EJA96_24745 PF00425 chorismate binding enzyme EJA96_24745 PF00117 Glutamine amidotransferase class-I EJA96_24765 PF01494 FAD binding domain EJA96_24785 PF07715 TonB-dependent Receptor Plug Domain EJA96_24785 PF00593 TonB dependent receptor EJA96_24795 PF00664 ABC transporter transmembrane region EJA96_24795 PF00005 ABC transporter EJA96_24795 PF08021 Siderophore-interacting FAD-binding domain EJA96_24795 PF04954 Siderophore-interacting protein EJA96_24820 PF12833 Helix-turn-helix domain EJA96_24825 PF13193 AMP-binding enzyme C-terminal domain EJA96_24825 PF00501 AMP-binding enzyme EJA96_24830 PF00975 Thioesterase domain EJA96_24835 PF01817 Chorismate mutase type II EJA96_24845 PF00436 Single-strand binding protein family EJA96_24850 PF07690 Major Facilitator Superfamily EJA96_24855 PF17755 UvrA DNA-binding domain EJA96_24855 PF17760 UvrA interaction domain EJA96_24860 PF00210 Ferritin-like domain EJA96_24865 PF00199 Catalase EJA96_24865 PF06628 Catalase-related immune-responsive EJA96_24870 PF01196 Ribosomal protein L17 EJA96_24875 PF01000 RNA polymerase Rpb3/RpoA insert domain EJA96_24875 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EJA96_24875 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EJA96_24880 PF00163 Ribosomal protein S4/S9 N-terminal domain EJA96_24880 PF01479 S4 domain EJA96_24885 PF00411 Ribosomal protein S11 EJA96_24890 PF00416 Ribosomal protein S13/S18 EJA96_24895 PF00444 Ribosomal protein L36 EJA96_24900 PF00344 SecY translocase EJA96_24905 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EJA96_24910 PF00327 Ribosomal protein L30p/L7e EJA96_24915 PF03719 Ribosomal protein S5, C-terminal domain EJA96_24915 PF00333 Ribosomal protein S5, N-terminal domain EJA96_24920 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EJA96_24925 PF00347 Ribosomal protein L6 EJA96_24930 PF00410 Ribosomal protein S8 EJA96_24935 PF00253 Ribosomal protein S14p/S29e EJA96_24940 PF00281 Ribosomal protein L5 EJA96_24940 PF00673 ribosomal L5P family C-terminus EJA96_24945 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EJA96_24945 PF00467 KOW motif EJA96_24950 PF00238 Ribosomal protein L14p/L23e EJA96_24955 PF00366 Ribosomal protein S17 EJA96_24960 PF00831 Ribosomal L29 protein EJA96_24965 PF00252 Ribosomal protein L16p/L10e EJA96_24970 PF00189 Ribosomal protein S3, C-terminal domain EJA96_24970 PF07650 KH domain EJA96_24975 PF00237 Ribosomal protein L22p/L17e EJA96_24980 PF00203 Ribosomal protein S19 EJA96_24985 PF00181 Ribosomal Proteins L2, RNA binding domain EJA96_24985 PF03947 Ribosomal Proteins L2, C-terminal domain EJA96_24990 PF00276 Ribosomal protein L23 EJA96_24995 PF00573 Ribosomal protein L4/L1 family EJA96_25000 PF00297 Ribosomal protein L3 EJA96_25005 PF00338 Ribosomal protein S10p/S20e EJA96_25010 PF03143 Elongation factor Tu C-terminal domain EJA96_25010 PF03144 Elongation factor Tu domain 2 EJA96_25010 PF00009 Elongation factor Tu GTP binding domain EJA96_25015 PF03764 Elongation factor G, domain IV EJA96_25015 PF14492 Elongation Factor G, domain II EJA96_25015 PF03144 Elongation factor Tu domain 2 EJA96_25015 PF00679 Elongation factor G C-terminus EJA96_25015 PF00009 Elongation factor Tu GTP binding domain EJA96_25020 PF00177 Ribosomal protein S7p/S5e EJA96_25025 PF00164 Ribosomal protein S12/S23 EJA96_25030 PF04998 RNA polymerase Rpb1, domain 5 EJA96_25030 PF05000 RNA polymerase Rpb1, domain 4 EJA96_25030 PF04983 RNA polymerase Rpb1, domain 3 EJA96_25030 PF00623 RNA polymerase Rpb1, domain 2 EJA96_25030 PF04997 RNA polymerase Rpb1, domain 1 EJA96_25035 PF04563 RNA polymerase beta subunit EJA96_25035 PF04561 RNA polymerase Rpb2, domain 2 EJA96_25035 PF04565 RNA polymerase Rpb2, domain 3 EJA96_25035 PF10385 RNA polymerase beta subunit external 1 domain EJA96_25035 PF00562 RNA polymerase Rpb2, domain 6 EJA96_25035 PF04560 RNA polymerase Rpb2, domain 7 EJA96_25040 PF16320 Ribosomal protein L7/L12 dimerisation domain EJA96_25040 PF00542 Ribosomal protein L7/L12 C-terminal domain EJA96_25045 PF00466 Ribosomal protein L10 EJA96_25050 PF00687 Ribosomal protein L1p/L10e family EJA96_25055 PF00298 Ribosomal protein L11, RNA binding domain EJA96_25055 PF03946 Ribosomal protein L11, N-terminal domain EJA96_25060 PF02357 Transcription termination factor nusG EJA96_25060 PF00467 KOW motif EJA96_25065 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EJA96_25075 PF00009 Elongation factor Tu GTP binding domain EJA96_25075 PF03144 Elongation factor Tu domain 2 EJA96_25075 PF03143 Elongation factor Tu C-terminal domain EJA96_25100 PF03309 Type III pantothenate kinase EJA96_25105 PF08279 HTH domain EJA96_25105 PF02237 Biotin protein ligase C terminal domain EJA96_25105 PF03099 Biotin/lipoate A/B protein ligase family EJA96_25135 PF01794 Ferric reductase like transmembrane component EJA96_25140 PF00174 Oxidoreductase molybdopterin binding domain EJA96_25145 PF01066 CDP-alcohol phosphatidyltransferase EJA96_25150 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EJA96_25150 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EJA96_25155 PF10369 Small subunit of acetolactate synthase EJA96_25160 PF00205 Thiamine pyrophosphate enzyme, central domain EJA96_25160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EJA96_25160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EJA96_25170 PF04287 tRNA pseudouridine synthase C EJA96_25180 PF00905 Penicillin binding protein transpeptidase domain EJA96_25180 PF00912 Transglycosylase EJA96_25180 PF14814 Bifunctional transglycosylase second domain EJA96_25200 PF00027 Cyclic nucleotide-binding domain EJA96_25210 PF00005 ABC transporter EJA96_25215 PF01032 FecCD transport family EJA96_25220 PF01497 Periplasmic binding protein EJA96_25225 PF05171 Haemin-degrading HemS.ChuX domain EJA96_25230 PF07715 TonB-dependent Receptor Plug Domain EJA96_25230 PF00593 TonB dependent receptor EJA96_25255 PF00155 Aminotransferase class I and II EJA96_25260 PF02567 Phenazine biosynthesis-like protein EJA96_25265 PF04228 Putative neutral zinc metallopeptidase EJA96_25275 PF00860 Permease family EJA96_25280 PF05958 tRNA (Uracil-5-)-methyltransferase EJA96_25285 PF17746 SfsA N-terminal OB domain EJA96_25285 PF03749 Sugar fermentation stimulation protein RE domain EJA96_25290 PF00155 Aminotransferase class I and II EJA96_25295 PF01258 Prokaryotic dksA/traR C4-type zinc finger EJA96_25300 PF00749 tRNA synthetases class I (E and Q), catalytic domain EJA96_25310 PF08447 PAS fold EJA96_25310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_25310 PF00512 His Kinase A (phospho-acceptor) domain EJA96_25310 PF00989 PAS fold EJA96_25315 PF00158 Sigma-54 interaction domain EJA96_25315 PF00072 Response regulator receiver domain EJA96_25315 PF02954 Bacterial regulatory protein, Fis family EJA96_25320 PF01743 Poly A polymerase head domain EJA96_25320 PF12626 Polymerase A arginine-rich C-terminus EJA96_25320 PF12627 Probable RNA and SrmB- binding site of polymerase A EJA96_25325 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EJA96_25330 PF02548 Ketopantoate hydroxymethyltransferase EJA96_25335 PF02569 Pantoate-beta-alanine ligase EJA96_25340 PF02261 Aspartate decarboxylase EJA96_25345 PF00342 Phosphoglucose isomerase EJA96_25350 PF13193 AMP-binding enzyme C-terminal domain EJA96_25350 PF16177 Acetyl-coenzyme A synthetase N-terminus EJA96_25350 PF00501 AMP-binding enzyme EJA96_25375 PF05532 CsbD-like EJA96_25380 PF04972 BON domain EJA96_25385 PF00575 S1 RNA binding domain EJA96_25385 PF03725 3' exoribonuclease family, domain 2 EJA96_25385 PF00013 KH domain EJA96_25385 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EJA96_25385 PF01138 3' exoribonuclease family, domain 1 EJA96_25395 PF00312 Ribosomal protein S15 EJA96_25400 PF16198 tRNA pseudouridylate synthase B C-terminal domain EJA96_25400 PF01509 TruB family pseudouridylate synthase (N terminal domain) EJA96_25400 PF09157 Pseudouridine synthase II TruB, C-terminal EJA96_25405 PF02033 Ribosome-binding factor A EJA96_25410 PF00009 Elongation factor Tu GTP binding domain EJA96_25410 PF11987 Translation-initiation factor 2 EJA96_25410 PF08364 Bacterial translation initiation factor IF-2 associated region EJA96_25410 PF04760 Translation initiation factor IF-2, N-terminal region EJA96_25415 PF08529 NusA N-terminal domain EJA96_25415 PF13184 NusA-like KH domain EJA96_25415 PF00575 S1 RNA binding domain EJA96_25420 PF02576 RimP N-terminal domain EJA96_25420 PF17384 RimP C-terminal SH3 domain EJA96_25435 PF03840 Preprotein translocase SecG subunit EJA96_25440 PF00121 Triosephosphate isomerase EJA96_25445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EJA96_25445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EJA96_25445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EJA96_25445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EJA96_25450 PF00809 Pterin binding enzyme EJA96_25455 PF00004 ATPase family associated with various cellular activities (AAA) EJA96_25455 PF17862 AAA+ lid domain EJA96_25455 PF06480 FtsH Extracellular EJA96_25455 PF01434 Peptidase family M41 EJA96_25460 PF01728 FtsJ-like methyltransferase EJA96_25465 PF01985 CRS1 / YhbY (CRM) domain EJA96_25475 PF01272 Transcription elongation factor, GreA/GreB, C-term EJA96_25475 PF03449 Transcription elongation factor, N-terminal EJA96_25480 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EJA96_25480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EJA96_25480 PF02142 MGS-like domain EJA96_25485 PF01810 LysE type translocator EJA96_25490 PF00117 Glutamine amidotransferase class-I EJA96_25490 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EJA96_25495 PF05173 Dihydrodipicolinate reductase, C-terminus EJA96_25495 PF01113 Dihydrodipicolinate reductase, N-terminus EJA96_25500 PF00684 DnaJ central domain EJA96_25500 PF01556 DnaJ C terminal domain EJA96_25500 PF00226 DnaJ domain EJA96_25505 PF00012 Hsp70 protein EJA96_25510 PF01025 GrpE EJA96_25520 PF02463 RecF/RecN/SMC N terminal domain EJA96_25525 PF01475 Ferric uptake regulator family EJA96_25530 PF04355 SmpA / OmlA family EJA96_25535 PF03658 RnfH family Ubiquitin EJA96_25540 PF03364 Polyketide cyclase / dehydrase and lipid transport EJA96_25545 PF01668 SmpB protein EJA96_25550 PF00392 Bacterial regulatory proteins, gntR family EJA96_25550 PF07729 FCD domain EJA96_25555 PF02652 L-lactate permease EJA96_25560 PF01070 FMN-dependent dehydrogenase EJA96_25575 PF17284 Spermidine synthase tetramerisation domain EJA96_25585 PF00486 Transcriptional regulatory protein, C terminal EJA96_25585 PF00072 Response regulator receiver domain EJA96_25590 PF08521 Two-component sensor kinase N-terminal EJA96_25590 PF00512 His Kinase A (phospho-acceptor) domain EJA96_25590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_25595 PF09278 MerR, DNA binding EJA96_25595 PF00376 MerR family regulatory protein EJA96_25605 PF00892 EamA-like transporter family EJA96_25615 PF00072 Response regulator receiver domain EJA96_25625 PF00892 EamA-like transporter family EJA96_25630 PF01037 Lrp/AsnC ligand binding domain EJA96_25635 PF02803 Thiolase, C-terminal domain EJA96_25635 PF00108 Thiolase, N-terminal domain EJA96_25645 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EJA96_25645 PF12833 Helix-turn-helix domain EJA96_25670 PF03009 Glycerophosphoryl diester phosphodiesterase family EJA96_25690 PF01597 Glycine cleavage H-protein EJA96_25695 PF04229 GrpB protein EJA96_25730 PF13520 Amino acid permease EJA96_25735 PF00202 Aminotransferase class-III EJA96_25745 PF09107 Elongation factor SelB, winged helix EJA96_25745 PF00009 Elongation factor Tu GTP binding domain EJA96_25745 PF03144 Elongation factor Tu domain 2 EJA96_25745 PF09106 Elongation factor SelB, winged helix EJA96_25755 PF04216 Protein involved in formate dehydrogenase formation EJA96_25760 PF01292 Prokaryotic cytochrome b561 EJA96_25765 PF13247 4Fe-4S dicluster domain EJA96_25765 PF09163 Formate dehydrogenase N, transmembrane EJA96_25770 PF01568 Molydopterin dinucleotide binding domain EJA96_25770 PF00384 Molybdopterin oxidoreductase EJA96_25770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EJA96_25775 PF00384 Molybdopterin oxidoreductase EJA96_25775 PF01568 Molydopterin dinucleotide binding domain EJA96_25775 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EJA96_25780 PF00561 alpha/beta hydrolase fold EJA96_25785 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_25785 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EJA96_25810 PF00535 Glycosyl transferase family 2 EJA96_25820 PF01554 MatE EJA96_25830 PF02690 Na+/Pi-cotransporter EJA96_25845 PF00689 Cation transporting ATPase, C-terminus EJA96_25845 PF00690 Cation transporter/ATPase, N-terminus EJA96_25855 PF00797 N-acetyltransferase EJA96_25865 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_25865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EJA96_25880 PF00106 short chain dehydrogenase EJA96_25885 PF03006 Haemolysin-III related EJA96_25890 PF00892 EamA-like transporter family EJA96_25895 PF10100 Staphylopine dehydrogenase EJA96_25900 PF03059 Nicotianamine synthase protein EJA96_25905 PF07715 TonB-dependent Receptor Plug Domain EJA96_25905 PF00593 TonB dependent receptor EJA96_25915 PF17810 Arginine decarboxylase helical bundle domain EJA96_25915 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EJA96_25915 PF17944 Arginine decarboxylase C-terminal helical extension EJA96_25920 PF01253 Translation initiation factor SUI1 EJA96_25925 PF00293 NUDIX domain EJA96_25940 PF00072 Response regulator receiver domain EJA96_25940 PF00990 Diguanylate cyclase, GGDEF domain EJA96_25940 PF00563 EAL domain EJA96_25945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_25955 PF01220 Dehydroquinase class II EJA96_25965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EJA96_25965 PF00289 Biotin carboxylase, N-terminal domain EJA96_25965 PF02785 Biotin carboxylase C-terminal domain EJA96_25985 PF01207 Dihydrouridine synthase (Dus) EJA96_25990 PF02954 Bacterial regulatory protein, Fis family EJA96_25995 PF02142 MGS-like domain EJA96_25995 PF01808 AICARFT/IMPCHase bienzyme EJA96_26000 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EJA96_26000 PF02843 Phosphoribosylglycinamide synthetase, C domain EJA96_26000 PF02844 Phosphoribosylglycinamide synthetase, N domain EJA96_26005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_26005 PF00512 His Kinase A (phospho-acceptor) domain EJA96_26005 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EJA96_26005 PF00672 HAMP domain EJA96_26005 PF01627 Hpt domain EJA96_26005 PF00072 Response regulator receiver domain EJA96_26010 PF01914 MarC family integral membrane protein EJA96_26015 PF13458 Periplasmic binding protein EJA96_26020 PF02653 Branched-chain amino acid transport system / permease component EJA96_26025 PF02653 Branched-chain amino acid transport system / permease component EJA96_26030 PF12399 Branched-chain amino acid ATP-binding cassette transporter EJA96_26030 PF00005 ABC transporter EJA96_26035 PF00005 ABC transporter EJA96_26050 PF00547 Urease, gamma subunit EJA96_26060 PF00699 Urease beta subunit EJA96_26065 PF00449 Urease alpha-subunit, N-terminal domain EJA96_26065 PF01979 Amidohydrolase family EJA96_26075 PF01258 Prokaryotic dksA/traR C4-type zinc finger EJA96_26095 PF00012 Hsp70 protein EJA96_26120 PF13411 MerR HTH family regulatory protein EJA96_26125 PF05170 AsmA family EJA96_26130 PF00210 Ferritin-like domain EJA96_26140 PF00174 Oxidoreductase molybdopterin binding domain EJA96_26145 PF01292 Prokaryotic cytochrome b561 EJA96_26155 PF00072 Response regulator receiver domain EJA96_26155 PF00486 Transcriptional regulatory protein, C terminal EJA96_26160 PF00512 His Kinase A (phospho-acceptor) domain EJA96_26160 PF00672 HAMP domain EJA96_26160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_26170 PF00487 Fatty acid desaturase EJA96_26180 PF00440 Bacterial regulatory proteins, tetR family EJA96_26185 PF05194 UreE urease accessory protein, C-terminal domain EJA96_26185 PF02814 UreE urease accessory protein, N-terminal domain EJA96_26190 PF01730 UreF EJA96_26195 PF02492 CobW/HypB/UreG, nucleotide-binding domain EJA96_26200 PF04955 HupE / UreJ protein EJA96_26210 PF08281 Sigma-70, region 4 EJA96_26210 PF04542 Sigma-70 region 2 EJA96_26220 PF03573 outer membrane porin, OprD family EJA96_26225 PF00171 Aldehyde dehydrogenase family EJA96_26240 PF03466 LysR substrate binding domain EJA96_26240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_26245 PF07690 Major Facilitator Superfamily EJA96_26250 PF00355 Rieske [2Fe-2S] domain EJA96_26255 PF00111 2Fe-2S iron-sulfur cluster binding domain EJA96_26255 PF00175 Oxidoreductase NAD-binding domain EJA96_26265 PF00106 short chain dehydrogenase EJA96_26270 PF02423 Ornithine cyclodeaminase/mu-crystallin family EJA96_26275 PF00005 ABC transporter EJA96_26280 PF00005 ABC transporter EJA96_26280 PF12399 Branched-chain amino acid ATP-binding cassette transporter EJA96_26285 PF11862 Domain of unknown function (DUF3382) EJA96_26285 PF02653 Branched-chain amino acid transport system / permease component EJA96_26290 PF02653 Branched-chain amino acid transport system / permease component EJA96_26295 PF13458 Periplasmic binding protein EJA96_26300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_26300 PF03466 LysR substrate binding domain EJA96_26305 PF00672 HAMP domain EJA96_26305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_26305 PF12729 Four helix bundle sensory module for signal transduction EJA96_26315 PF01467 Cytidylyltransferase-like EJA96_26325 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EJA96_26325 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EJA96_26330 PF02540 NAD synthase EJA96_26340 PF00127 Copper binding proteins, plastocyanin/azurin family EJA96_26345 PF03641 Possible lysine decarboxylase EJA96_26350 PF01476 LysM domain EJA96_26350 PF01551 Peptidase family M23 EJA96_26355 PF05552 Conserved TM helix EJA96_26355 PF00924 Mechanosensitive ion channel EJA96_26360 PF08379 Bacterial transglutaminase-like N-terminal region EJA96_26360 PF01841 Transglutaminase-like superfamily EJA96_26370 PF08497 Radical SAM N-terminal EJA96_26370 PF11842 Domain of unknown function (DUF3362) EJA96_26370 PF04055 Radical SAM superfamily EJA96_26380 PF00563 EAL domain EJA96_26380 PF03707 Bacterial signalling protein N terminal repeat EJA96_26380 PF00990 Diguanylate cyclase, GGDEF domain EJA96_26380 PF13188 PAS domain EJA96_26385 PF00232 Glycosyl hydrolase family 1 EJA96_26390 PF01168 Alanine racemase, N-terminal domain EJA96_26390 PF00842 Alanine racemase, C-terminal domain EJA96_26395 PF00772 DnaB-like helicase N terminal domain EJA96_26395 PF03796 DnaB-like helicase C terminal domain EJA96_26400 PF03948 Ribosomal protein L9, C-terminal domain EJA96_26400 PF01281 Ribosomal protein L9, N-terminal domain EJA96_26410 PF01084 Ribosomal protein S18 EJA96_26415 PF01250 Ribosomal protein S6 EJA96_26420 PF08032 RNA 2'-O ribose methyltransferase substrate binding EJA96_26420 PF00588 SpoU rRNA Methylase family EJA96_26425 PF08461 Ribonuclease R winged-helix domain EJA96_26425 PF08206 Ribonuclease B OB domain EJA96_26425 PF17876 Cold shock domain EJA96_26425 PF00575 S1 RNA binding domain EJA96_26425 PF00773 RNB domain EJA96_26440 PF00709 Adenylosuccinate synthetase EJA96_26445 PF13393 Histidyl-tRNA synthetase EJA96_26455 PF01145 SPFH domain / Band 7 family EJA96_26460 PF01145 SPFH domain / Band 7 family EJA96_26465 PF13167 GTP-binding GTPase N-terminal EJA96_26465 PF01926 50S ribosome-binding GTPase EJA96_26465 PF16360 GTP-binding GTPase Middle Region EJA96_26470 PF17209 Hfq protein EJA96_26480 PF01119 DNA mismatch repair protein, C-terminal domain EJA96_26480 PF08676 MutL C terminal dimerisation domain EJA96_26485 PF01520 N-acetylmuramoyl-L-alanine amidase EJA96_26485 PF11741 AMIN domain EJA96_26490 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EJA96_26495 PF03853 YjeF-related protein N-terminus EJA96_26495 PF01256 Carbohydrate kinase EJA96_26500 PF08331 Domain of unknown function (DUF1730) EJA96_26505 PF00929 Exonuclease EJA96_26510 PF03193 RsgA GTPase EJA96_26520 PF01618 MotA/TolQ/ExbB proton channel family EJA96_26530 PF00581 Rhodanese-like domain EJA96_26535 PF02666 Phosphatidylserine decarboxylase EJA96_26550 PF00563 EAL domain EJA96_26550 PF00990 Diguanylate cyclase, GGDEF domain EJA96_26550 PF03707 Bacterial signalling protein N terminal repeat EJA96_26565 PF04307 LexA-binding, inner membrane-associated putative hydrolase EJA96_26575 PF00521 DNA gyrase/topoisomerase IV, subunit A EJA96_26575 PF03989 DNA gyrase C-terminal domain, beta-propeller EJA96_26590 PF00204 DNA gyrase B EJA96_26590 PF00986 DNA gyrase B subunit, carboxyl terminus EJA96_26590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_26590 PF01751 Toprim domain EJA96_26595 PF05728 Uncharacterised protein family (UPF0227) EJA96_26600 PF00149 Calcineurin-like phosphoesterase EJA96_26610 PF00293 NUDIX domain EJA96_26620 PF13667 ThiC-associated domain EJA96_26620 PF01964 Radical SAM ThiC family EJA96_26625 PF02321 Outer membrane efflux protein EJA96_26630 PF02525 Flavodoxin-like fold EJA96_26635 PF00155 Aminotransferase class I and II EJA96_26640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EJA96_26640 PF00205 Thiamine pyrophosphate enzyme, central domain EJA96_26640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EJA96_26650 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_26650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_26650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_26655 PF00378 Enoyl-CoA hydratase/isomerase EJA96_26660 PF00324 Amino acid permease EJA96_26665 PF17149 Periplasmic sensor domain found in signal transduction proteins EJA96_26665 PF00072 Response regulator receiver domain EJA96_26665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_26665 PF00512 His Kinase A (phospho-acceptor) domain EJA96_26665 PF01627 Hpt domain EJA96_26665 PF00672 HAMP domain EJA96_26675 PF00486 Transcriptional regulatory protein, C terminal EJA96_26675 PF00072 Response regulator receiver domain EJA96_26700 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EJA96_26705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_26705 PF03466 LysR substrate binding domain EJA96_26710 PF00893 Small Multidrug Resistance protein EJA96_26715 PF01266 FAD dependent oxidoreductase EJA96_26720 PF00248 Aldo/keto reductase family EJA96_26730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_26730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_26730 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_26735 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_26735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_26735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_26740 PF01467 Cytidylyltransferase-like EJA96_26740 PF00294 pfkB family carbohydrate kinase EJA96_26745 PF00664 ABC transporter transmembrane region EJA96_26745 PF00005 ABC transporter EJA96_26755 PF04932 O-Antigen ligase EJA96_26760 PF00535 Glycosyl transferase family 2 EJA96_26780 PF00534 Glycosyl transferases group 1 EJA96_26785 PF02543 Carbamoyltransferase N-terminus EJA96_26785 PF16861 Carbamoyltransferase C-terminus EJA96_26810 PF13439 Glycosyltransferase Family 4 EJA96_26810 PF00534 Glycosyl transferases group 1 EJA96_26815 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EJA96_26820 PF01075 Glycosyltransferase family 9 (heptosyltransferase) EJA96_26825 PF01063 Amino-transferase class IV EJA96_26830 PF03710 Glutamate-ammonia ligase adenylyltransferase EJA96_26830 PF08335 GlnD PII-uridylyltransferase EJA96_26835 PF00456 Transketolase, thiamine diphosphate binding domain EJA96_26835 PF17831 Pyruvate dehydrogenase E1 component middle domain EJA96_26845 PF02817 e3 binding domain EJA96_26845 PF00364 Biotin-requiring enzyme EJA96_26845 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EJA96_26855 PF00990 Diguanylate cyclase, GGDEF domain EJA96_26855 PF00563 EAL domain EJA96_26855 PF03707 Bacterial signalling protein N terminal repeat EJA96_26860 PF01625 Peptide methionine sulfoxide reductase EJA96_26865 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EJA96_26870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_26870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_26870 PF12806 Acetyl-CoA dehydrogenase C-terminal like EJA96_26870 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_26880 PF03471 Transporter associated domain EJA96_26880 PF00999 Sodium/hydrogen exchanger family EJA96_26880 PF02080 TrkA-C domain EJA96_26885 PF12794 Mechanosensitive ion channel inner membrane domain 1 EJA96_26885 PF00924 Mechanosensitive ion channel EJA96_26885 PF12795 Mechanosensitive ion channel porin domain EJA96_26890 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EJA96_26895 PF01925 Sulfite exporter TauE/SafE EJA96_26900 PF01053 Cys/Met metabolism PLP-dependent enzyme EJA96_26915 PF13614 AAA domain EJA96_26920 PF03466 LysR substrate binding domain EJA96_26920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_26925 PF07690 Major Facilitator Superfamily EJA96_26930 PF00106 short chain dehydrogenase EJA96_26945 PF01208 Uroporphyrinogen decarboxylase (URO-D) EJA96_26950 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_26950 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EJA96_26955 PF01645 Conserved region in glutamate synthase EJA96_26955 PF04898 Glutamate synthase central domain EJA96_26955 PF01493 GXGXG motif EJA96_26955 PF00310 Glutamine amidotransferases class-II EJA96_26965 PF01761 3-dehydroquinate synthase EJA96_26970 PF01202 Shikimate kinase EJA96_26975 PF11741 AMIN domain EJA96_26975 PF00263 Bacterial type II and III secretion system protein EJA96_26975 PF07660 Secretin and TonB N terminus short domain EJA96_26975 PF03958 Bacterial type II/III secretion system short domain EJA96_27000 PF00905 Penicillin binding protein transpeptidase domain EJA96_27000 PF00912 Transglycosylase EJA96_27000 PF17092 Penicillin-binding protein OB-like domain EJA96_27005 PF00390 Malic enzyme, N-terminal domain EJA96_27005 PF03949 Malic enzyme, NAD binding domain EJA96_27020 PF01197 Ribosomal protein L31 EJA96_27025 PF00270 DEAD/DEAH box helicase EJA96_27025 PF18074 Primosomal protein N C-terminal domain EJA96_27025 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EJA96_27025 PF00271 Helicase conserved C-terminal domain EJA96_27025 PF17764 3′ DNA-binding domain (3′BD) EJA96_27030 PF03485 Arginyl tRNA synthetase N terminal domain EJA96_27030 PF00750 tRNA synthetases class I (R) EJA96_27030 PF05746 DALR anticodon binding domain EJA96_27040 PF00227 Proteasome subunit EJA96_27045 PF00004 ATPase family associated with various cellular activities (AAA) EJA96_27045 PF07724 AAA domain (Cdc48 subfamily) EJA96_27060 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus EJA96_27070 PF00561 alpha/beta hydrolase fold EJA96_27075 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus EJA96_27100 PF01209 ubiE/COQ5 methyltransferase family EJA96_27110 PF03109 ABC1 family EJA96_27115 PF01502 Phosphoribosyl-AMP cyclohydrolase EJA96_27120 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EJA96_27125 PF02416 mttA/Hcf106 family EJA96_27130 PF02416 mttA/Hcf106 family EJA96_27135 PF00902 Sec-independent protein translocase protein (TatC) EJA96_27145 PF16591 Helical bimodular sensor domain EJA96_27145 PF00672 HAMP domain EJA96_27145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_27150 PF03682 Uncharacterised protein family (UPF0158) EJA96_27155 PF00005 ABC transporter EJA96_27160 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_27165 PF00497 Bacterial extracellular solute-binding proteins, family 3 EJA96_27170 PF00535 Glycosyl transferase family 2 EJA96_27175 PF04349 Periplasmic glucan biosynthesis protein, MdoG EJA96_27180 PF02580 D-Tyr-tRNA(Tyr) deacylase EJA96_27185 PF00561 alpha/beta hydrolase fold EJA96_27190 PF00293 NUDIX domain EJA96_27195 PF00497 Bacterial extracellular solute-binding proteins, family 3 EJA96_27200 PF01042 Endoribonuclease L-PSP EJA96_27230 PF13396 Phospholipase_D-nuclease N-terminal EJA96_27230 PF13091 PLD-like domain EJA96_27235 PF04717 Type VI secretion system, phage-baseplate injector EJA96_27245 PF01979 Amidohydrolase family EJA96_27250 PF00221 Aromatic amino acid lyase EJA96_27255 PF00005 ABC transporter EJA96_27255 PF00571 CBS domain EJA96_27260 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_27270 PF00324 Amino acid permease EJA96_27275 PF00221 Aromatic amino acid lyase EJA96_27280 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin EJA96_27285 PF17391 Urocanase N-terminal domain EJA96_27285 PF01175 Urocanase Rossmann-like domain EJA96_27285 PF17392 Urocanase C-terminal domain EJA96_27305 PF05962 HutD EJA96_27310 PF00392 Bacterial regulatory proteins, gntR family EJA96_27310 PF07702 UTRA domain EJA96_27315 PF01979 Amidohydrolase family EJA96_27320 PF08212 Lipocalin-like domain EJA96_27335 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EJA96_27340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EJA96_27345 PF00657 GDSL-like Lipase/Acylhydrolase EJA96_27345 PF03797 Autotransporter beta-domain EJA96_27365 PF00376 MerR family regulatory protein EJA96_27365 PF09278 MerR, DNA binding EJA96_27375 PF02926 THUMP domain EJA96_27375 PF02568 Thiamine biosynthesis protein (ThiI) EJA96_27385 PF03951 Glutamine synthetase, beta-Grasp domain EJA96_27385 PF00120 Glutamine synthetase, catalytic domain EJA96_27395 PF00924 Mechanosensitive ion channel EJA96_27410 PF00512 His Kinase A (phospho-acceptor) domain EJA96_27410 PF00989 PAS fold EJA96_27410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_27415 PF02954 Bacterial regulatory protein, Fis family EJA96_27415 PF00072 Response regulator receiver domain EJA96_27415 PF00158 Sigma-54 interaction domain EJA96_27430 PF00588 SpoU rRNA Methylase family EJA96_27435 PF02556 Preprotein translocase subunit SecB EJA96_27440 PF00462 Glutaredoxin EJA96_27450 PF01676 Metalloenzyme superfamily EJA96_27450 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EJA96_27465 PF03572 Peptidase family S41 EJA96_27465 PF13180 PDZ domain EJA96_27470 PF04748 Divergent polysaccharide deacetylase EJA96_27495 PF00977 Histidine biosynthesis protein EJA96_27500 PF00977 Histidine biosynthesis protein EJA96_27510 PF00117 Glutamine amidotransferase class-I EJA96_27515 PF00475 Imidazoleglycerol-phosphate dehydratase EJA96_27530 PF01266 FAD dependent oxidoreductase EJA96_27540 PF10576 Iron-sulfur binding domain of endonuclease III EJA96_27540 PF00633 Helix-hairpin-helix motif EJA96_27540 PF14815 NUDIX domain EJA96_27540 PF00730 HhH-GPD superfamily base excision DNA repair protein EJA96_27545 PF04362 Bacterial Fe(2+) trafficking EJA96_27550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EJA96_27550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EJA96_27560 PF00589 Phage integrase family EJA96_27600 PF02899 Phage integrase, N-terminal SAM-like domain EJA96_27600 PF00589 Phage integrase family EJA96_27650 PF00005 ABC transporter EJA96_27655 PF00497 Bacterial extracellular solute-binding proteins, family 3 EJA96_27660 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_27665 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_27675 PF01047 MarR family EJA96_27680 PF02321 Outer membrane efflux protein EJA96_27685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EJA96_27685 PF00529 HlyD membrane-fusion protein of T1SS EJA96_27690 PF07690 Major Facilitator Superfamily EJA96_27725 PF16363 GDP-mannose 4,6 dehydratase EJA96_27730 PF04321 RmlD substrate binding domain EJA96_27735 PF00483 Nucleotidyl transferase EJA96_27740 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EJA96_27745 PF02743 Cache domain EJA96_27745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_27745 PF00512 His Kinase A (phospho-acceptor) domain EJA96_27750 PF02954 Bacterial regulatory protein, Fis family EJA96_27750 PF00158 Sigma-54 interaction domain EJA96_27750 PF00072 Response regulator receiver domain EJA96_27755 PF03480 Bacterial extracellular solute-binding protein, family 7 EJA96_27760 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EJA96_27765 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EJA96_27770 PF13520 Amino acid permease EJA96_27780 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EJA96_27780 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EJA96_27785 PF00696 Amino acid kinase family EJA96_27790 PF02801 Beta-ketoacyl synthase, C-terminal domain EJA96_27790 PF00109 Beta-ketoacyl synthase, N-terminal domain EJA96_27795 PF00459 Inositol monophosphatase family EJA96_27800 PF00293 NUDIX domain EJA96_27805 PF13419 Haloacid dehalogenase-like hydrolase EJA96_27810 PF04972 BON domain EJA96_27810 PF01476 LysM domain EJA96_27815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_27815 PF03466 LysR substrate binding domain EJA96_27820 PF02634 FdhD/NarQ family EJA96_27825 PF01568 Molydopterin dinucleotide binding domain EJA96_27825 PF00384 Molybdopterin oxidoreductase EJA96_27840 PF02599 Global regulator protein family EJA96_27845 PF01817 Chorismate mutase type II EJA96_27850 PF03061 Thioesterase superfamily EJA96_27855 PF00465 Iron-containing alcohol dehydrogenase EJA96_27860 PF12806 Acetyl-CoA dehydrogenase C-terminal like EJA96_27860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EJA96_27860 PF02770 Acyl-CoA dehydrogenase, middle domain EJA96_27860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EJA96_27865 PF00378 Enoyl-CoA hydratase/isomerase EJA96_27865 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EJA96_27865 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EJA96_27875 PF00881 Nitroreductase family EJA96_27885 PF01293 Phosphoenolpyruvate carboxykinase EJA96_27895 PF01430 Hsp33 protein EJA96_27905 PF01479 S4 domain EJA96_27910 PF18030 RimK PreATP-grasp domain EJA96_27910 PF08443 RimK-like ATP-grasp domain EJA96_27915 PF18030 RimK PreATP-grasp domain EJA96_27915 PF08443 RimK-like ATP-grasp domain EJA96_27920 PF17676 LD-carboxypeptidase C-terminal domain EJA96_27920 PF02016 LD-carboxypeptidase N-terminal domain EJA96_27925 PF00672 HAMP domain EJA96_27925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_27925 PF00512 His Kinase A (phospho-acceptor) domain EJA96_27930 PF00486 Transcriptional regulatory protein, C terminal EJA96_27930 PF00072 Response regulator receiver domain EJA96_27935 PF09371 Tex-like protein N-terminal domain EJA96_27935 PF16921 Tex protein YqgF-like domain EJA96_27935 PF00575 S1 RNA binding domain EJA96_27935 PF17674 HHH domain EJA96_27945 PF04262 Glutamate-cysteine ligase EJA96_27950 PF00583 Acetyltransferase (GNAT) family EJA96_27950 PF00696 Amino acid kinase family EJA96_27955 PF01914 MarC family integral membrane protein EJA96_27960 PF07687 Peptidase dimerisation domain EJA96_27960 PF01546 Peptidase family M20/M25/M40 EJA96_27965 PF01384 Phosphate transporter family EJA96_27970 PF01865 Protein of unknown function DUF47 EJA96_27980 PF00437 Type II/IV secretion system protein EJA96_27995 PF01212 Beta-eliminating lyase EJA96_27995 PF02347 Glycine cleavage system P-protein EJA96_28000 PF01597 Glycine cleavage H-protein EJA96_28005 PF08669 Glycine cleavage T-protein C-terminal barrel domain EJA96_28005 PF01571 Aminomethyltransferase folate-binding domain EJA96_28010 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_28020 PF03466 LysR substrate binding domain EJA96_28020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_28035 PF01494 FAD binding domain EJA96_28045 PF01494 FAD binding domain EJA96_28050 PF05195 Aminopeptidase P, N-terminal domain EJA96_28050 PF00557 Metallopeptidase family M24 EJA96_28065 PF05164 Cell division protein ZapA EJA96_28075 PF01812 5-formyltetrahydrofolate cyclo-ligase family EJA96_28090 PF00005 ABC transporter EJA96_28095 PF13533 Biotin-lipoyl like EJA96_28105 PF00109 Beta-ketoacyl synthase, N-terminal domain EJA96_28105 PF16197 Ketoacyl-synthetase C-terminal extension EJA96_28105 PF14765 Polyketide synthase dehydratase EJA96_28105 PF08990 Erythronolide synthase docking EJA96_28105 PF00550 Phosphopantetheine attachment site EJA96_28105 PF00698 Acyl transferase domain EJA96_28105 PF02801 Beta-ketoacyl synthase, C-terminal domain EJA96_28105 PF08240 Alcohol dehydrogenase GroES-like domain EJA96_28105 PF08659 KR domain EJA96_28110 PF07690 Major Facilitator Superfamily EJA96_28115 PF00175 Oxidoreductase NAD-binding domain EJA96_28120 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EJA96_28125 PF01757 Acyltransferase family EJA96_28130 PF07498 Rho termination factor, N-terminal domain EJA96_28130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EJA96_28130 PF07497 Rho termination factor, RNA-binding domain EJA96_28135 PF00085 Thioredoxin EJA96_28140 PF02541 Ppx/GppA phosphatase family EJA96_28145 PF13090 Polyphosphate kinase C-terminal domain 2 EJA96_28145 PF17941 Polyphosphate kinase C-terminal domain 1 EJA96_28145 PF02503 Polyphosphate kinase middle domain EJA96_28145 PF13089 Polyphosphate kinase N-terminal domain EJA96_28150 PF00490 Delta-aminolevulinic acid dehydratase EJA96_28155 PF09335 SNARE associated Golgi protein EJA96_28165 PF03061 Thioesterase superfamily EJA96_28170 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EJA96_28175 PF03239 Iron permease FTR1 family EJA96_28180 PF01810 LysE type translocator EJA96_28185 PF03741 Integral membrane protein TerC family EJA96_28195 PF12848 ABC transporter EJA96_28195 PF00005 ABC transporter EJA96_28210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EJA96_28210 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EJA96_28215 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ EJA96_28220 PF02600 Disulfide bond formation protein DsbB EJA96_28235 PF02602 Uroporphyrinogen-III synthase HemD EJA96_28240 PF03900 Porphobilinogen deaminase, C-terminal domain EJA96_28240 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EJA96_28245 PF04397 LytTr DNA-binding domain EJA96_28245 PF00072 Response regulator receiver domain EJA96_28250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_28250 PF07694 5TMR of 5TMR-LYT EJA96_28250 PF06580 Histidine kinase EJA96_28255 PF00206 Lyase EJA96_28255 PF14698 Argininosuccinate lyase C-terminal EJA96_28275 PF05638 Type VI secretion system effector, Hcp EJA96_28280 PF01544 CorA-like Mg2+ transporter protein EJA96_28300 PF12633 Adenylate cyclase NT domain EJA96_28300 PF01295 Adenylate cyclase, class-I EJA96_28310 PF01272 Transcription elongation factor, GreA/GreB, C-term EJA96_28310 PF14760 Rnk N-terminus EJA96_28320 PF01491 Frataxin-like domain EJA96_28325 PF13627 Prokaryotic lipoprotein-attachment site EJA96_28330 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EJA96_28330 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EJA96_28335 PF01678 Diaminopimelate epimerase EJA96_28360 PF00155 Aminotransferase class I and II EJA96_28360 PF00392 Bacterial regulatory proteins, gntR family EJA96_28380 PF01894 Uncharacterised protein family UPF0047 EJA96_28385 PF00909 Ammonium Transporter Family EJA96_28390 PF00543 Nitrogen regulatory protein P-II EJA96_28395 PF04380 Membrane fusogenic activity EJA96_28435 PF00271 Helicase conserved C-terminal domain EJA96_28435 PF04434 SWIM zinc finger EJA96_28435 PF00176 SNF2 family N-terminal domain EJA96_28460 PF01420 Type I restriction modification DNA specificity domain EJA96_28465 PF02384 N-6 DNA Methylase EJA96_28465 PF12161 HsdM N-terminal domain EJA96_28475 PF04851 Type III restriction enzyme, res subunit EJA96_28475 PF00271 Helicase conserved C-terminal domain EJA96_28475 PF08463 EcoEI R protein C-terminal EJA96_28475 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) EJA96_28495 PF07929 Plasmid pRiA4b ORF-3-like protein EJA96_28520 PF00350 Dynamin family EJA96_28535 PF01695 IstB-like ATP binding protein EJA96_28540 PF00665 Integrase core domain EJA96_28570 PF01209 ubiE/COQ5 methyltransferase family EJA96_28575 PF00005 ABC transporter EJA96_28585 PF16363 GDP-mannose 4,6 dehydratase EJA96_28615 PF01348 Type II intron maturase EJA96_28615 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJA96_28620 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) EJA96_28645 PF12705 PD-(D/E)XK nuclease superfamily EJA96_28645 PF00580 UvrD/REP helicase N-terminal domain EJA96_28645 PF13361 UvrD-like helicase C-terminal domain EJA96_28700 PF01695 IstB-like ATP binding protein EJA96_28725 PF02384 N-6 DNA Methylase EJA96_28725 PF12161 HsdM N-terminal domain EJA96_28750 PF17868 AAA lid domain EJA96_28750 PF07728 AAA domain (dynein-related subfamily) EJA96_28750 PF12592 Protein of unknown function (DUF3763) EJA96_28760 PF18766 SWI2/SNF2 ATPase EJA96_28760 PF11867 Domain of unknown function (DUF3387) EJA96_28760 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EJA96_28770 PF13411 MerR HTH family regulatory protein EJA96_28785 PF00795 Carbon-nitrogen hydrolase EJA96_28790 PF01252 Signal peptidase (SPase) II EJA96_28825 PF05638 Type VI secretion system effector, Hcp EJA96_28830 PF04717 Type VI secretion system, phage-baseplate injector EJA96_28890 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EJA96_28895 PF01047 MarR family EJA96_28910 PF01769 Divalent cation transporter EJA96_28910 PF00571 CBS domain EJA96_28910 PF03448 MgtE intracellular N domain EJA96_28925 PF01494 FAD binding domain EJA96_28930 PF07690 Major Facilitator Superfamily EJA96_28935 PF01220 Dehydroquinase class II EJA96_28940 PF08501 Shikimate dehydrogenase substrate binding domain EJA96_28940 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EJA96_28945 PF17938 Tetracyclin repressor-like, C-terminal domain EJA96_28945 PF00440 Bacterial regulatory proteins, tetR family EJA96_28950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EJA96_28955 PF07690 Major Facilitator Superfamily EJA96_28960 PF03573 outer membrane porin, OprD family EJA96_28975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EJA96_28975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EJA96_28985 PF07690 Major Facilitator Superfamily EJA96_28995 PF03466 LysR substrate binding domain EJA96_28995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_29000 PF02627 Carboxymuconolactone decarboxylase family EJA96_29005 PF12146 Serine aminopeptidase, S33 EJA96_29015 PF00083 Sugar (and other) transporter EJA96_29020 PF00108 Thiolase, N-terminal domain EJA96_29020 PF02803 Thiolase, C-terminal domain EJA96_29025 PF01144 Coenzyme A transferase EJA96_29030 PF01144 Coenzyme A transferase EJA96_29035 PF08671 Anti-repressor SinI EJA96_29035 PF01381 Helix-turn-helix EJA96_29040 PF00596 Class II Aldolase and Adducin N-terminal domain EJA96_29045 PF00701 Dihydrodipicolinate synthetase family EJA96_29055 PF00202 Aminotransferase class-III EJA96_29060 PF00324 Amino acid permease EJA96_29080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_29080 PF03466 LysR substrate binding domain EJA96_29095 PF00698 Acyl transferase domain EJA96_29100 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG EJA96_29110 PF01039 Carboxyl transferase domain EJA96_29125 PF16957 Malonate decarboxylase, alpha subunit, transporter EJA96_29140 PF02472 Biopolymer transport protein ExbD/TolR EJA96_29145 PF01618 MotA/TolQ/ExbB proton channel family EJA96_29155 PF02233 NAD(P) transhydrogenase beta subunit EJA96_29160 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EJA96_29165 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EJA96_29165 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EJA96_29170 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EJA96_29175 PF02668 Taurine catabolism dioxygenase TauD, TfdA family EJA96_29180 PF07715 TonB-dependent Receptor Plug Domain EJA96_29180 PF00593 TonB dependent receptor EJA96_29190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_29190 PF03466 LysR substrate binding domain EJA96_29200 PF03573 outer membrane porin, OprD family EJA96_29205 PF09084 NMT1/THI5 like EJA96_29215 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_29220 PF00005 ABC transporter EJA96_29225 PF00884 Sulfatase EJA96_29235 PF03466 LysR substrate binding domain EJA96_29235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_29240 PF00672 HAMP domain EJA96_29240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_29240 PF12729 Four helix bundle sensory module for signal transduction EJA96_29245 PF00072 Response regulator receiver domain EJA96_29250 PF01627 Hpt domain EJA96_29250 PF09078 CheY binding EJA96_29250 PF02895 Signal transducing histidine kinase, homodimeric domain EJA96_29250 PF01584 CheW-like domain EJA96_29250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_29255 PF01584 CheW-like domain EJA96_29260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EJA96_29260 PF00672 HAMP domain EJA96_29260 PF02203 Tar ligand binding domain homologue EJA96_29265 PF01739 CheR methyltransferase, SAM binding domain EJA96_29265 PF03705 CheR methyltransferase, all-alpha domain EJA96_29270 PF03975 CheD chemotactic sensory transduction EJA96_29275 PF01339 CheB methylesterase EJA96_29275 PF00072 Response regulator receiver domain EJA96_29290 PF09345 Domain of unknown function (DUF1987) EJA96_29295 PF00990 Diguanylate cyclase, GGDEF domain EJA96_29295 PF00072 Response regulator receiver domain EJA96_29300 PF01205 Uncharacterized protein family UPF0029 EJA96_29305 PF08362 YcdC-like protein, C-terminal region EJA96_29305 PF00440 Bacterial regulatory proteins, tetR family EJA96_29310 PF00860 Permease family EJA96_29330 PF03573 outer membrane porin, OprD family EJA96_29345 PF03466 LysR substrate binding domain EJA96_29345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_29350 PF00873 AcrB/AcrD/AcrF family EJA96_29360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EJA96_29365 PF09339 IclR helix-turn-helix domain EJA96_29365 PF01614 Bacterial transcriptional regulator EJA96_29375 PF00775 Dioxygenase EJA96_29380 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal EJA96_29380 PF00775 Dioxygenase EJA96_29385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_29385 PF03466 LysR substrate binding domain EJA96_29390 PF00593 TonB dependent receptor EJA96_29390 PF07715 TonB-dependent Receptor Plug Domain EJA96_29405 PF00962 Adenosine/AMP deaminase EJA96_29410 PF03171 2OG-Fe(II) oxygenase superfamily EJA96_29410 PF14226 non-haem dioxygenase in morphine synthesis N-terminal EJA96_29415 PF02608 ABC transporter substrate-binding protein PnrA-like EJA96_29430 PF03502 Nucleoside-specific channel-forming protein, Tsx EJA96_29435 PF01156 Inosine-uridine preferring nucleoside hydrolase EJA96_29440 PF01979 Amidohydrolase family EJA96_29445 PF03976 Polyphosphate kinase 2 (PPK2) EJA96_29450 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_29450 PF13192 Thioredoxin domain EJA96_29455 PF00578 AhpC/TSA family EJA96_29455 PF10417 C-terminal domain of 1-Cys peroxiredoxin EJA96_29485 PF01979 Amidohydrolase family EJA96_29490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_29490 PF03466 LysR substrate binding domain EJA96_29495 PF00202 Aminotransferase class-III EJA96_29500 PF07883 Cupin domain EJA96_29505 PF00171 Aldehyde dehydrogenase family EJA96_29510 PF00324 Amino acid permease EJA96_29515 PF03831 PhnA domain EJA96_29515 PF08274 PhnA Zinc-Ribbon EJA96_29540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_29540 PF03466 LysR substrate binding domain EJA96_29555 PF00392 Bacterial regulatory proteins, gntR family EJA96_29555 PF07729 FCD domain EJA96_29560 PF00375 Sodium:dicarboxylate symporter family EJA96_29565 PF01323 DSBA-like thioredoxin domain EJA96_29575 PF01638 HxlR-like helix-turn-helix EJA96_29580 PF13673 Acetyltransferase (GNAT) domain EJA96_29585 PF02630 SCO1/SenC EJA96_29590 PF01040 UbiA prenyltransferase family EJA96_29615 PF00510 Cytochrome c oxidase subunit III EJA96_29620 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 EJA96_29625 PF00115 Cytochrome C and Quinol oxidase polypeptide I EJA96_29630 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EJA96_29630 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EJA96_29645 PF00916 Sulfate permease family EJA96_29645 PF01740 STAS domain EJA96_29650 PF00484 Carbonic anhydrase EJA96_29685 PF04717 Type VI secretion system, phage-baseplate injector EJA96_29685 PF16671 Actin cross-linking domain EJA96_29710 PF04717 Type VI secretion system, phage-baseplate injector EJA96_29710 PF16671 Actin cross-linking domain EJA96_29715 PF17871 AAA lid domain EJA96_29715 PF07724 AAA domain (Cdc48 subfamily) EJA96_29715 PF10431 C-terminal, D2-small domain, of ClpB protein EJA96_29715 PF00004 ATPase family associated with various cellular activities (AAA) EJA96_29740 PF05638 Type VI secretion system effector, Hcp EJA96_29795 PF00069 Protein kinase domain EJA96_29795 PF03793 PASTA domain EJA96_29810 PF03781 Sulfatase-modifying factor enzyme 1 EJA96_29845 PF01545 Cation efflux family EJA96_29845 PF16916 Dimerisation domain of Zinc Transporter EJA96_29855 PF00376 MerR family regulatory protein EJA96_29855 PF09278 MerR, DNA binding EJA96_29860 PF02411 MerT mercuric transport protein EJA96_29865 PF00403 Heavy-metal-associated domain EJA96_29875 PF01526 Tn3 transposase DDE domain EJA96_29875 PF13700 Domain of unknown function (DUF4158) EJA96_29890 PF00239 Resolvase, N terminal domain EJA96_29890 PF02796 Helix-turn-helix domain of resolvase EJA96_29895 PF13610 DDE domain EJA96_29910 PF01636 Phosphotransferase enzyme family EJA96_29925 PF01526 Tn3 transposase DDE domain EJA96_29925 PF13700 Domain of unknown function (DUF4158) EJA96_29930 PF02796 Helix-turn-helix domain of resolvase EJA96_29930 PF00239 Resolvase, N terminal domain EJA96_29940 PF00589 Phage integrase family EJA96_29940 PF13495 Phage integrase, N-terminal SAM-like domain EJA96_29950 PF07690 Major Facilitator Superfamily EJA96_29955 PF00905 Penicillin binding protein transpeptidase domain EJA96_29965 PF00893 Small Multidrug Resistance protein EJA96_29970 PF00809 Pterin binding enzyme EJA96_29990 PF13610 DDE domain EJA96_30000 PF12804 MobA-like NTP transferase domain EJA96_30000 PF00132 Bacterial transferase hexapeptide (six repeats) EJA96_30005 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EJA96_30005 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain EJA96_30010 PF02874 ATP synthase alpha/beta family, beta-barrel domain EJA96_30010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EJA96_30015 PF00231 ATP synthase EJA96_30020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EJA96_30020 PF00306 ATP synthase alpha/beta chain, C terminal domain EJA96_30020 PF02874 ATP synthase alpha/beta family, beta-barrel domain EJA96_30025 PF00213 ATP synthase delta (OSCP) subunit EJA96_30030 PF00430 ATP synthase B/B' CF(0) EJA96_30035 PF00137 ATP synthase subunit C EJA96_30040 PF00119 ATP synthase A chain EJA96_30045 PF03899 ATP synthase I chain EJA96_30050 PF17762 HTH domain found in ParB protein EJA96_30050 PF02195 ParB-like nuclease domain EJA96_30055 PF13614 AAA domain EJA96_30060 PF02527 rRNA small subunit methyltransferase G EJA96_30065 PF13932 GidA associated domain EJA96_30065 PF01134 Glucose inhibited division protein A EJA96_30100 PF18766 SWI2/SNF2 ATPase EJA96_30100 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EJA96_30100 PF12008 Type I restriction and modification enzyme - subunit R C terminal EJA96_30110 PF01420 Type I restriction modification DNA specificity domain EJA96_30115 PF12161 HsdM N-terminal domain EJA96_30115 PF02384 N-6 DNA Methylase EJA96_30125 PF00589 Phage integrase family EJA96_30125 PF13356 Arm DNA-binding domain EJA96_30130 PF10396 GTP-binding protein TrmE N-terminus EJA96_30130 PF12631 MnmE helical domain EJA96_30130 PF01926 50S ribosome-binding GTPase EJA96_30135 PF14849 YidC periplasmic domain EJA96_30135 PF02096 60Kd inner membrane protein EJA96_30140 PF00825 Ribonuclease P EJA96_30145 PF00468 Ribosomal protein L34 EJA96_30150 PF11638 DnaA N-terminal domain EJA96_30150 PF00308 Bacterial dnaA protein EJA96_30150 PF08299 Bacterial dnaA protein helix-turn-helix EJA96_30155 PF00712 DNA polymerase III beta subunit, N-terminal domain EJA96_30155 PF02767 DNA polymerase III beta subunit, central domain EJA96_30155 PF02768 DNA polymerase III beta subunit, C-terminal domain EJA96_30160 PF02463 RecF/RecN/SMC N terminal domain EJA96_30165 PF01751 Toprim domain EJA96_30165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_30165 PF18053 DNA gyrase B subunit insert domain EJA96_30165 PF00986 DNA gyrase B subunit, carboxyl terminus EJA96_30165 PF00204 DNA gyrase B EJA96_30170 PF08463 EcoEI R protein C-terminal EJA96_30170 PF00271 Helicase conserved C-terminal domain EJA96_30170 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) EJA96_30170 PF04851 Type III restriction enzyme, res subunit EJA96_30185 PF13683 Integrase core domain EJA96_30185 PF13276 HTH-like domain EJA96_30210 PF07411 Domain of unknown function (DUF1508) EJA96_30240 PF05746 DALR anticodon binding domain EJA96_30240 PF02092 Glycyl-tRNA synthetase beta subunit EJA96_30245 PF02091 Glycyl-tRNA synthetase alpha subunit EJA96_30250 PF03352 Methyladenine glycosylase EJA96_30265 PF02592 Putative vitamin uptake transporter EJA96_30280 PF02254 TrkA-N domain EJA96_30280 PF02080 TrkA-C domain EJA96_30285 PF01189 16S rRNA methyltransferase RsmB/F EJA96_30285 PF01029 NusB family EJA96_30290 PF02911 Formyl transferase, C-terminal domain EJA96_30290 PF00551 Formyl transferase EJA96_30295 PF01327 Polypeptide deformylase EJA96_30300 PF01476 LysM domain EJA96_30310 PF01300 Telomere recombination EJA96_30315 PF00107 Zinc-binding dehydrogenase EJA96_30315 PF08240 Alcohol dehydrogenase GroES-like domain EJA96_30320 PF01218 Coproporphyrinogen III oxidase EJA96_30325 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EJA96_30325 PF01488 Shikimate / quinate 5-dehydrogenase EJA96_30325 PF08501 Shikimate dehydrogenase substrate binding domain EJA96_30350 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EJA96_30355 PF00884 Sulfatase EJA96_30355 PF12411 Choline sulfatase enzyme C terminal EJA96_30360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_30360 PF03466 LysR substrate binding domain EJA96_30375 PF00072 Response regulator receiver domain EJA96_30375 PF00196 Bacterial regulatory proteins, luxR family EJA96_30380 PF00290 Tryptophan synthase alpha chain EJA96_30385 PF00291 Pyridoxal-phosphate dependent enzyme EJA96_30390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_30390 PF03466 LysR substrate binding domain EJA96_30395 PF07311 Dodecin EJA96_30405 PF08479 POTRA domain, ShlB-type EJA96_30405 PF17287 POTRA domain EJA96_30405 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB EJA96_30410 PF13332 Hemagglutinin repeat EJA96_30410 PF05860 haemagglutination activity domain EJA96_30410 PF05594 Haemagluttinin repeat EJA96_30410 PF13332 Hemagglutinin repeat EJA96_30410 PF05594 Haemagluttinin repeat EJA96_30410 PF04829 Pre-toxin domain with VENN motif EJA96_30410 PF04829 Pre-toxin domain with VENN motif EJA96_30410 PF05860 haemagglutination activity domain EJA96_30495 PF13194 Domain of unknown function (DUF4010) EJA96_30500 PF03545 Yersinia virulence determinant (YopE) EJA96_30500 PF03496 ADP-ribosyltransferase exoenzyme EJA96_30505 PF03783 Curli production assembly/transport component CsgG EJA96_30515 PF05643 Putative bacterial lipoprotein (DUF799) EJA96_30535 PF00733 Asparagine synthase EJA96_30535 PF13537 Glutamine amidotransferase domain EJA96_30545 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family EJA96_30555 PF03466 LysR substrate binding domain EJA96_30555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_30570 PF02566 OsmC-like protein EJA96_30575 PF06649 Protein of unknown function (DUF1161) EJA96_30600 PF13419 Haloacid dehalogenase-like hydrolase EJA96_30605 PF00132 Bacterial transferase hexapeptide (six repeats) EJA96_30610 PF01432 Peptidase family M3 EJA96_30615 PF09526 Probable metal-binding protein (DUF2387) EJA96_30650 PF02384 N-6 DNA Methylase EJA96_30675 PF04851 Type III restriction enzyme, res subunit EJA96_30720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EJA96_30720 PF00403 Heavy-metal-associated domain EJA96_30720 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_30725 PF03203 MerC mercury resistance protein EJA96_30730 PF00403 Heavy-metal-associated domain EJA96_30735 PF02411 MerT mercuric transport protein EJA96_30740 PF09278 MerR, DNA binding EJA96_30740 PF00376 MerR family regulatory protein EJA96_30770 PF02899 Phage integrase, N-terminal SAM-like domain EJA96_30770 PF00589 Phage integrase family EJA96_30775 PF11799 impB/mucB/samB family C-terminal domain EJA96_30775 PF00817 impB/mucB/samB family EJA96_30775 PF13438 Domain of unknown function (DUF4113) EJA96_30795 PF03061 Thioesterase superfamily EJA96_30800 PF02311 AraC-like ligand binding domain EJA96_30800 PF12833 Helix-turn-helix domain EJA96_30810 PF06977 SdiA-regulated EJA96_30820 PF00582 Universal stress protein family EJA96_30825 PF00916 Sulfate permease family EJA96_30825 PF01740 STAS domain EJA96_30830 PF00563 EAL domain EJA96_30830 PF00990 Diguanylate cyclase, GGDEF domain EJA96_30830 PF03707 Bacterial signalling protein N terminal repeat EJA96_30835 PF05052 MerE protein EJA96_30840 PF13411 MerR HTH family regulatory protein EJA96_30845 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_30845 PF00403 Heavy-metal-associated domain EJA96_30845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EJA96_30850 PF00403 Heavy-metal-associated domain EJA96_30855 PF02411 MerT mercuric transport protein EJA96_30860 PF09278 MerR, DNA binding EJA96_30860 PF00376 MerR family regulatory protein EJA96_30885 PF13700 Domain of unknown function (DUF4158) EJA96_30885 PF01526 Tn3 transposase DDE domain EJA96_30890 PF00239 Resolvase, N terminal domain EJA96_30890 PF02796 Helix-turn-helix domain of resolvase EJA96_30900 PF13495 Phage integrase, N-terminal SAM-like domain EJA96_30900 PF00589 Phage integrase family EJA96_30905 PF00583 Acetyltransferase (GNAT) family EJA96_30910 PF10706 Aminoglycoside-2''-adenylyltransferase EJA96_30915 PF00583 Acetyltransferase (GNAT) family EJA96_30920 PF06442 R67 dihydrofolate reductase EJA96_30930 PF01909 Nucleotidyltransferase domain EJA96_30930 PF13427 Domain of unknown function (DUF4111) EJA96_30935 PF01548 Transposase EJA96_30935 PF02371 Transposase IS116/IS110/IS902 family EJA96_30975 PF01619 Proline dehydrogenase EJA96_30975 PF00171 Aldehyde dehydrogenase family EJA96_30975 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EJA96_30975 PF14850 DNA-binding domain of Proline dehydrogenase EJA96_31005 PF00440 Bacterial regulatory proteins, tetR family EJA96_31005 PF02909 Tetracyclin repressor-like, C-terminal domain EJA96_31010 PF07690 Major Facilitator Superfamily EJA96_31020 PF00893 Small Multidrug Resistance protein EJA96_31040 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EJA96_31050 PF00753 Metallo-beta-lactamase superfamily EJA96_31055 PF13610 DDE domain EJA96_31070 PF00455 DeoR C terminal sensor domain EJA96_31070 PF08220 DeoR-like helix-turn-helix domain EJA96_31075 PF01380 SIS domain EJA96_31080 PF07690 Major Facilitator Superfamily EJA96_31095 PF16868 NMT1-like family EJA96_31115 PF01979 Amidohydrolase family EJA96_31125 PF02649 Type I GTP cyclohydrolase folE2 EJA96_31130 PF01520 N-acetylmuramoyl-L-alanine amidase EJA96_31140 PF01258 Prokaryotic dksA/traR C4-type zinc finger EJA96_31145 PF07683 Cobalamin synthesis protein cobW C-terminal domain EJA96_31145 PF02492 CobW/HypB/UreG, nucleotide-binding domain EJA96_31160 PF07683 Cobalamin synthesis protein cobW C-terminal domain EJA96_31160 PF02492 CobW/HypB/UreG, nucleotide-binding domain EJA96_31165 PF03544 Gram-negative bacterial TonB protein C-terminal EJA96_31170 PF00083 Sugar (and other) transporter EJA96_31175 PF02254 TrkA-N domain EJA96_31175 PF00999 Sodium/hydrogen exchanger family EJA96_31210 PF00202 Aminotransferase class-III EJA96_31215 PF00120 Glutamine synthetase, catalytic domain EJA96_31230 PF03061 Thioesterase superfamily EJA96_31235 PF02254 TrkA-N domain EJA96_31235 PF00999 Sodium/hydrogen exchanger family EJA96_31245 PF08543 Phosphomethylpyrimidine kinase EJA96_31255 PF00905 Penicillin binding protein transpeptidase domain EJA96_31265 PF02743 Cache domain EJA96_31265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_31265 PF00512 His Kinase A (phospho-acceptor) domain EJA96_31270 PF00158 Sigma-54 interaction domain EJA96_31270 PF00072 Response regulator receiver domain EJA96_31270 PF02954 Bacterial regulatory protein, Fis family EJA96_31275 PF00324 Amino acid permease EJA96_31300 PF03180 NLPA lipoprotein EJA96_31305 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_31310 PF09383 NIL domain EJA96_31310 PF00005 ABC transporter EJA96_31320 PF00950 ABC 3 transport family EJA96_31325 PF00005 ABC transporter EJA96_31330 PF01475 Ferric uptake regulator family EJA96_31335 PF01297 Zinc-uptake complex component A periplasmic EJA96_31350 PF01636 Phosphotransferase enzyme family EJA96_31360 PF01367 5'-3' exonuclease, C-terminal SAM fold EJA96_31360 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EJA96_31360 PF00476 DNA polymerase family A EJA96_31360 PF01612 3'-5' exonuclease EJA96_31365 PF01926 50S ribosome-binding GTPase EJA96_31370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EJA96_31375 PF00034 Cytochrome c EJA96_31380 PF01323 DSBA-like thioredoxin domain EJA96_31390 PF00072 Response regulator receiver domain EJA96_31390 PF00990 Diguanylate cyclase, GGDEF domain EJA96_31395 PF01914 MarC family integral membrane protein EJA96_31400 PF01510 N-acetylmuramoyl-L-alanine amidase EJA96_31405 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB EJA96_31405 PF00512 His Kinase A (phospho-acceptor) domain EJA96_31405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_31405 PF08448 PAS fold EJA96_31405 PF00672 HAMP domain EJA96_31410 PF00158 Sigma-54 interaction domain EJA96_31410 PF02954 Bacterial regulatory protein, Fis family EJA96_31410 PF00072 Response regulator receiver domain EJA96_31430 PF00375 Sodium:dicarboxylate symporter family EJA96_31435 PF07670 Nucleoside recognition EJA96_31445 PF07690 Major Facilitator Superfamily EJA96_31465 PF02690 Na+/Pi-cotransporter EJA96_31485 PF00472 RF-1 domain EJA96_31490 PF03741 Integral membrane protein TerC family EJA96_31495 PF03600 Citrate transporter EJA96_31505 PF03547 Membrane transport protein EJA96_31545 PF01757 Acyltransferase family EJA96_31570 PF16363 GDP-mannose 4,6 dehydratase EJA96_31575 PF16363 GDP-mannose 4,6 dehydratase EJA96_31580 PF00483 Nucleotidyl transferase EJA96_31580 PF01050 Mannose-6-phosphate isomerase EJA96_31590 PF00005 ABC transporter EJA96_31600 PF13579 Glycosyl transferase 4-like domain EJA96_31600 PF00534 Glycosyl transferases group 1 EJA96_31605 PF00534 Glycosyl transferases group 1 EJA96_31605 PF13439 Glycosyltransferase Family 4 EJA96_31615 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain EJA96_31615 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain EJA96_31620 PF00892 EamA-like transporter family EJA96_31630 PF00563 EAL domain EJA96_31630 PF00990 Diguanylate cyclase, GGDEF domain EJA96_31630 PF03707 Bacterial signalling protein N terminal repeat EJA96_31650 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EJA96_31650 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EJA96_31655 PF01380 SIS domain EJA96_31655 PF01418 Helix-turn-helix domain, rpiR family EJA96_31665 PF03466 LysR substrate binding domain EJA96_31665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_31670 PF02785 Biotin carboxylase C-terminal domain EJA96_31670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EJA96_31670 PF00289 Biotin carboxylase, N-terminal domain EJA96_31675 PF00364 Biotin-requiring enzyme EJA96_31675 PF02436 Conserved carboxylase domain EJA96_31675 PF00682 HMGL-like EJA96_31680 PF03222 Tryptophan/tyrosine permease family EJA96_31700 PF04143 Sulphur transport EJA96_31710 PF00206 Lyase EJA96_31710 PF10415 Fumarase C C-terminus EJA96_31715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_31715 PF03466 LysR substrate binding domain EJA96_31720 PF08240 Alcohol dehydrogenase GroES-like domain EJA96_31720 PF00107 Zinc-binding dehydrogenase EJA96_31730 PF00731 AIR carboxylase EJA96_31735 PF02222 ATP-grasp domain EJA96_31735 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EJA96_31750 PF01263 Aldose 1-epimerase EJA96_31755 PF08240 Alcohol dehydrogenase GroES-like domain EJA96_31755 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EJA96_31760 PF00551 Formyl transferase EJA96_31770 PF08669 Glycine cleavage T-protein C-terminal barrel domain EJA96_31770 PF17806 Sarcosine oxidase A3 domain EJA96_31770 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_31770 PF01571 Aminomethyltransferase folate-binding domain EJA96_31780 PF01266 FAD dependent oxidoreductase EJA96_31785 PF00464 Serine hydroxymethyltransferase EJA96_31795 PF01212 Beta-eliminating lyase EJA96_31805 PF00175 Oxidoreductase NAD-binding domain EJA96_31805 PF00970 Oxidoreductase FAD-binding domain EJA96_31805 PF00042 Globin EJA96_31810 PF00355 Rieske [2Fe-2S] domain EJA96_31810 PF00848 Ring hydroxylating alpha subunit (catalytic domain) EJA96_31845 PF13443 Cro/C1-type HTH DNA-binding domain EJA96_31860 PF01012 Electron transfer flavoprotein domain EJA96_31860 PF00766 Electron transfer flavoprotein FAD-binding domain EJA96_31865 PF02754 Cysteine-rich domain EJA96_31865 PF13183 4Fe-4S dicluster domain EJA96_31870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EJA96_31880 PF01244 Membrane dipeptidase (Peptidase family M19) EJA96_31890 PF13091 PLD-like domain EJA96_31900 PF01042 Endoribonuclease L-PSP EJA96_31910 PF01546 Peptidase family M20/M25/M40 EJA96_31910 PF07687 Peptidase dimerisation domain EJA96_31915 PF01965 DJ-1/PfpI family EJA96_31915 PF12833 Helix-turn-helix domain EJA96_31920 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EJA96_31925 PF05853 beta-keto acid cleavage enzyme EJA96_31930 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EJA96_31930 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EJA96_31940 PF07859 alpha/beta hydrolase fold EJA96_31945 PF03601 Conserved hypothetical protein 698 EJA96_31960 PF01965 DJ-1/PfpI family EJA96_31960 PF12833 Helix-turn-helix domain EJA96_31965 PF03315 Serine dehydratase beta chain EJA96_31965 PF03313 Serine dehydratase alpha chain EJA96_31970 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EJA96_31975 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_31980 PF00571 CBS domain EJA96_31980 PF00005 ABC transporter EJA96_31985 PF02028 BCCT, betaine/carnitine/choline family transporter EJA96_31995 PF00440 Bacterial regulatory proteins, tetR family EJA96_31995 PF13977 BetI-type transcriptional repressor, C-terminal EJA96_32000 PF00171 Aldehyde dehydrogenase family EJA96_32005 PF05199 GMC oxidoreductase EJA96_32005 PF00732 GMC oxidoreductase EJA96_32010 PF03061 Thioesterase superfamily EJA96_32015 PF07690 Major Facilitator Superfamily EJA96_32045 PF12849 PBP superfamily domain EJA96_32050 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_32055 PF00528 Binding-protein-dependent transport system inner membrane component EJA96_32060 PF00005 ABC transporter EJA96_32065 PF01895 PhoU domain EJA96_32070 PF00072 Response regulator receiver domain EJA96_32075 PF01476 LysM domain EJA96_32075 PF01551 Peptidase family M23 EJA96_32075 PF08525 Opacity-associated protein A N-terminal motif EJA96_32080 PF03471 Transporter associated domain EJA96_32080 PF00571 CBS domain EJA96_32080 PF01595 Cyclin M transmembrane N-terminal domain EJA96_32085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EJA96_32085 PF00512 His Kinase A (phospho-acceptor) domain EJA96_32085 PF11808 Phosphate regulon sensor protein PhoR EJA96_32085 PF00989 PAS fold EJA96_32090 PF00072 Response regulator receiver domain EJA96_32090 PF00486 Transcriptional regulatory protein, C terminal EJA96_32100 PF01040 UbiA prenyltransferase family EJA96_32105 PF04345 Chorismate lyase EJA96_32110 PF07729 FCD domain EJA96_32110 PF00392 Bacterial regulatory proteins, gntR family EJA96_32115 PF01565 FAD binding domain EJA96_32115 PF02913 FAD linked oxidases, C-terminal domain EJA96_32120 PF01565 FAD binding domain EJA96_32125 PF02754 Cysteine-rich domain EJA96_32125 PF13183 4Fe-4S dicluster domain EJA96_32135 PF00301 Rubredoxin EJA96_32140 PF00301 Rubredoxin EJA96_32145 PF07992 Pyridine nucleotide-disulphide oxidoreductase EJA96_32145 PF18113 Rubredoxin binding C-terminal domain EJA96_32155 PF00216 Bacterial DNA-binding protein EJA96_32170 PF17191 RecG wedge domain EJA96_32170 PF00271 Helicase conserved C-terminal domain EJA96_32170 PF00270 DEAD/DEAH box helicase EJA96_32175 PF03466 LysR substrate binding domain EJA96_32175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_32200 PF01042 Endoribonuclease L-PSP EJA96_32205 PF02824 TGS domain EJA96_32205 PF04607 Region found in RelA / SpoT proteins EJA96_32205 PF13291 ACT domain EJA96_32210 PF01192 RNA polymerase Rpb6 EJA96_32215 PF00625 Guanylate kinase EJA96_32220 PF08340 Domain of unknown function (DUF1732) EJA96_32220 PF03755 YicC-like family, N-terminal region EJA96_32225 PF03725 3' exoribonuclease family, domain 2 EJA96_32225 PF01138 3' exoribonuclease family, domain 1 EJA96_32235 PF03372 Endonuclease/Exonuclease/phosphatase family EJA96_32240 PF00156 Phosphoribosyl transferase domain EJA96_32255 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EJA96_32260 PF04030 D-arabinono-1,4-lactone oxidase EJA96_32260 PF01565 FAD binding domain EJA96_32275 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term EJA96_32275 PF12833 Helix-turn-helix domain EJA96_32280 PF00696 Amino acid kinase family EJA96_32285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EJA96_32285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EJA96_32285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EJA96_32285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EJA96_32290 PF00692 dUTPase EJA96_32295 PF02441 Flavoprotein EJA96_32295 PF04127 DNA / pantothenate metabolism flavoprotein EJA96_32300 PF04002 RadC-like JAB domain EJA96_32310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EJA96_32315 PF00830 Ribosomal L28 family EJA96_32320 PF00471 Ribosomal protein L33 EJA96_32330 PF00202 Aminotransferase class-III EJA96_32335 PF00171 Aldehyde dehydrogenase family EJA96_32340 PF07690 Major Facilitator Superfamily EJA96_32345 PF13091 PLD-like domain EJA96_32350 PF01266 FAD dependent oxidoreductase EJA96_32355 PF01037 Lrp/AsnC ligand binding domain EJA96_32365 PF13617 YnbE-like lipoprotein EJA96_32375 PF01266 FAD dependent oxidoreductase EJA96_32380 PF01042 Endoribonuclease L-PSP EJA96_32385 PF01168 Alanine racemase, N-terminal domain EJA96_32385 PF00842 Alanine racemase, C-terminal domain EJA96_32390 PF07883 Cupin domain EJA96_32390 PF01381 Helix-turn-helix EJA96_32395 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EJA96_32400 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain EJA96_32400 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain EJA96_32405 PF00156 Phosphoribosyl transferase domain EJA96_32410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EJA96_32410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EJA96_32410 PF00205 Thiamine pyrophosphate enzyme, central domain EJA96_32415 PF00580 UvrD/REP helicase N-terminal domain EJA96_32415 PF13361 UvrD-like helicase C-terminal domain EJA96_32420 PF03707 Bacterial signalling protein N terminal repeat EJA96_32420 PF00990 Diguanylate cyclase, GGDEF domain EJA96_32420 PF00563 EAL domain EJA96_32425 PF01554 MatE EJA96_32430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EJA96_32430 PF03466 LysR substrate binding domain EJA96_32440 PF02028 BCCT, betaine/carnitine/choline family transporter