locus-tag class description PA257_0001 PF00308 Bacterial dnaA protein PA257_0001 PF11638 DnaA N-terminal domain PA257_0001 PF08299 Bacterial dnaA protein helix-turn-helix PA257_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain PA257_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain PA257_0002 PF02767 DNA polymerase III beta subunit, central domain PA257_0003 PF02463 RecF/RecN/SMC N terminal domain PA257_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_0004 PF18053 DNA gyrase B subunit insert domain PA257_0004 PF00204 DNA gyrase B PA257_0004 PF00986 DNA gyrase B subunit, carboxyl terminus PA257_0004 PF01751 Toprim domain PA257_0005 PF08463 EcoEI R protein C-terminal PA257_0005 PF04851 Type III restriction enzyme, res subunit PA257_0005 PF00271 Helicase conserved C-terminal domain PA257_0005 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) PA257_0006 PF01527 Transposase PA257_0007 PF13683 Integrase core domain PA257_0007 PF13276 HTH-like domain PA257_0009 PF07411 Domain of unknown function (DUF1508) PA257_0011 PF00665 Integrase core domain PA257_0012 PF01527 Transposase PA257_0018 PF02092 Glycyl-tRNA synthetase beta subunit PA257_0018 PF05746 DALR anticodon binding domain PA257_0019 PF02091 Glycyl-tRNA synthetase alpha subunit PA257_0020 PF03352 Methyladenine glycosylase PA257_0023 PF02592 Putative vitamin uptake transporter PA257_0025 PF02080 TrkA-C domain PA257_0025 PF02254 TrkA-N domain PA257_0026 PF01189 16S rRNA methyltransferase RsmB/F PA257_0026 PF01029 NusB family PA257_0027 PF00551 Formyl transferase PA257_0027 PF02911 Formyl transferase, C-terminal domain PA257_0028 PF01327 Polypeptide deformylase PA257_0029 PF01476 LysM domain PA257_0030 PF17782 DprA winged helix domain PA257_0030 PF02481 DNA recombination-mediator protein A PA257_0031 PF01300 Telomere recombination PA257_0032 PF00107 Zinc-binding dehydrogenase PA257_0032 PF08240 Alcohol dehydrogenase GroES-like domain PA257_0033 PF01218 Coproporphyrinogen III oxidase PA257_0034 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PA257_0034 PF01488 Shikimate / quinate 5-dehydrogenase PA257_0034 PF08501 Shikimate dehydrogenase substrate binding domain PA257_0039 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PA257_0040 PF00884 Sulfatase PA257_0040 PF12411 Choline sulfatase enzyme C terminal PA257_0041 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0041 PF03466 LysR substrate binding domain PA257_0044 PF00072 Response regulator receiver domain PA257_0044 PF00196 Bacterial regulatory proteins, luxR family PA257_0045 PF00290 Tryptophan synthase alpha chain PA257_0046 PF00291 Pyridoxal-phosphate dependent enzyme PA257_0047 PF03466 LysR substrate binding domain PA257_0047 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0048 PF07311 Dodecin PA257_0050 PF17287 POTRA domain PA257_0050 PF08479 POTRA domain, ShlB-type PA257_0050 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB PA257_0051 PF13332 Hemagglutinin repeat PA257_0051 PF05860 haemagglutination activity domain PA257_0051 PF05860 haemagglutination activity domain PA257_0051 PF04829 Pre-toxin domain with VENN motif PA257_0051 PF13332 Hemagglutinin repeat PA257_0051 PF04829 Pre-toxin domain with VENN motif PA257_0051 PF05594 Haemagluttinin repeat PA257_0051 PF05594 Haemagluttinin repeat PA257_0054 PF14436 Bacterial EndoU nuclease PA257_0054 PF05860 haemagglutination activity domain PA257_0054 PF05594 Haemagluttinin repeat PA257_0054 PF13332 Hemagglutinin repeat PA257_0054 PF04829 Pre-toxin domain with VENN motif PA257_0061 PF13194 Domain of unknown function (DUF4010) PA257_0063 PF03545 Yersinia virulence determinant (YopE) PA257_0063 PF03496 ADP-ribosyltransferase exoenzyme PA257_0064 PF03783 Curli production assembly/transport component CsgG PA257_0066 PF05643 Putative bacterial lipoprotein (DUF799) PA257_0071 PF00733 Asparagine synthase PA257_0071 PF13537 Glutamine amidotransferase domain PA257_0073 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family PA257_0075 PF03466 LysR substrate binding domain PA257_0075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0078 PF02566 OsmC-like protein PA257_0079 PF06649 Protein of unknown function (DUF1161) PA257_0084 PF13419 Haloacid dehalogenase-like hydrolase PA257_0085 PF00132 Bacterial transferase hexapeptide (six repeats) PA257_0086 PF01432 Peptidase family M3 PA257_0087 PF09526 Probable metal-binding protein (DUF2387) PA257_0088 PF04055 Radical SAM superfamily PA257_0091 PF03781 Sulfatase-modifying factor enzyme 1 PA257_0093 PF00005 ABC transporter PA257_0093 PF02687 FtsX-like permease family PA257_0093 PF12704 MacB-like periplasmic core domain PA257_0094 PF03793 PASTA domain PA257_0094 PF00069 Protein kinase domain PA257_0098 PF00691 OmpA family PA257_0098 PF13677 Membrane MotB of proton-channel complex MotA/MotB PA257_0106 PF05638 Type VI secretion system effector, Hcp PA257_0111 PF00004 ATPase family associated with various cellular activities (AAA) PA257_0111 PF07724 AAA domain (Cdc48 subfamily) PA257_0111 PF10431 C-terminal, D2-small domain, of ClpB protein PA257_0111 PF17871 AAA lid domain PA257_0112 PF16671 Actin cross-linking domain PA257_0112 PF04717 Type VI secretion system, phage-baseplate injector PA257_0117 PF16671 Actin cross-linking domain PA257_0117 PF04717 Type VI secretion system, phage-baseplate injector PA257_0124 PF00484 Carbonic anhydrase PA257_0125 PF01740 STAS domain PA257_0125 PF00916 Sulfate permease family PA257_0128 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PA257_0128 PF02790 Cytochrome C oxidase subunit II, transmembrane domain PA257_0129 PF00115 Cytochrome C and Quinol oxidase polypeptide I PA257_0130 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 PA257_0131 PF00510 Cytochrome c oxidase subunit III PA257_0136 PF01040 UbiA prenyltransferase family PA257_0137 PF02630 SCO1/SenC PA257_0138 PF13673 Acetyltransferase (GNAT) domain PA257_0139 PF01638 HxlR-like helix-turn-helix PA257_0141 PF01323 DSBA-like thioredoxin domain PA257_0142 PF00375 Sodium:dicarboxylate symporter family PA257_0143 PF07729 FCD domain PA257_0143 PF00392 Bacterial regulatory proteins, gntR family PA257_0146 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0146 PF03466 LysR substrate binding domain PA257_0151 PF08274 PhnA Zinc-Ribbon PA257_0151 PF03831 PhnA domain PA257_0152 PF00324 Amino acid permease PA257_0153 PF00171 Aldehyde dehydrogenase family PA257_0154 PF07883 Cupin domain PA257_0155 PF00202 Aminotransferase class-III PA257_0156 PF03466 LysR substrate binding domain PA257_0156 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0157 PF01979 Amidohydrolase family PA257_0163 PF00578 AhpC/TSA family PA257_0163 PF10417 C-terminal domain of 1-Cys peroxiredoxin PA257_0164 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_0164 PF13192 Thioredoxin domain PA257_0165 PF03976 Polyphosphate kinase 2 (PPK2) PA257_0166 PF01979 Amidohydrolase family PA257_0167 PF01156 Inosine-uridine preferring nucleoside hydrolase PA257_0168 PF03502 Nucleoside-specific channel-forming protein, Tsx PA257_0172 PF02608 ABC transporter substrate-binding protein PnrA-like PA257_0173 PF03171 2OG-Fe(II) oxygenase superfamily PA257_0173 PF14226 non-haem dioxygenase in morphine synthesis N-terminal PA257_0174 PF00962 Adenosine/AMP deaminase PA257_0177 PF07715 TonB-dependent Receptor Plug Domain PA257_0177 PF00593 TonB dependent receptor PA257_0178 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0178 PF03466 LysR substrate binding domain PA257_0179 PF00775 Dioxygenase PA257_0179 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal PA257_0180 PF00775 Dioxygenase PA257_0182 PF09339 IclR helix-turn-helix domain PA257_0182 PF01614 Bacterial transcriptional regulator PA257_0183 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PA257_0185 PF00873 AcrB/AcrD/AcrF family PA257_0186 PF03466 LysR substrate binding domain PA257_0186 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0189 PF03573 outer membrane porin, OprD family PA257_0193 PF00860 Permease family PA257_0194 PF08362 YcdC-like protein, C-terminal region PA257_0194 PF00440 Bacterial regulatory proteins, tetR family PA257_0195 PF01205 Uncharacterized protein family UPF0029 PA257_0196 PF00990 Diguanylate cyclase, GGDEF domain PA257_0196 PF00072 Response regulator receiver domain PA257_0197 PF09345 Domain of unknown function (DUF1987) PA257_0200 PF01339 CheB methylesterase PA257_0200 PF00072 Response regulator receiver domain PA257_0201 PF03975 CheD chemotactic sensory transduction PA257_0202 PF01739 CheR methyltransferase, SAM binding domain PA257_0202 PF03705 CheR methyltransferase, all-alpha domain PA257_0203 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_0203 PF02203 Tar ligand binding domain homologue PA257_0203 PF00672 HAMP domain PA257_0204 PF01584 CheW-like domain PA257_0205 PF01584 CheW-like domain PA257_0205 PF02895 Signal transducing histidine kinase, homodimeric domain PA257_0205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_0205 PF01627 Hpt domain PA257_0205 PF09078 CheY binding PA257_0206 PF00072 Response regulator receiver domain PA257_0207 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_0207 PF12729 Four helix bundle sensory module for signal transduction PA257_0207 PF00672 HAMP domain PA257_0208 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0208 PF03466 LysR substrate binding domain PA257_0210 PF00884 Sulfatase PA257_0211 PF00005 ABC transporter PA257_0212 PF00528 Binding-protein-dependent transport system inner membrane component PA257_0213 PF09084 NMT1/THI5 like PA257_0214 PF03573 outer membrane porin, OprD family PA257_0216 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0216 PF03466 LysR substrate binding domain PA257_0219 PF07715 TonB-dependent Receptor Plug Domain PA257_0219 PF00593 TonB dependent receptor PA257_0220 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PA257_0221 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PA257_0223 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PA257_0223 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PA257_0224 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch PA257_0225 PF02233 NAD(P) transhydrogenase beta subunit PA257_0227 PF03544 Gram-negative bacterial TonB protein C-terminal PA257_0228 PF01618 MotA/TolQ/ExbB proton channel family PA257_0229 PF02472 Biopolymer transport protein ExbD/TolR PA257_0233 PF16957 Malonate decarboxylase, alpha subunit, transporter PA257_0234 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase PA257_0235 PF06857 Malonate decarboxylase delta subunit (MdcD) PA257_0236 PF01039 Carboxyl transferase domain PA257_0239 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG PA257_0240 PF00698 Acyl transferase domain PA257_0243 PF03466 LysR substrate binding domain PA257_0243 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0246 PF00171 Aldehyde dehydrogenase family PA257_0247 PF00324 Amino acid permease PA257_0248 PF00202 Aminotransferase class-III PA257_0250 PF00701 Dihydrodipicolinate synthetase family PA257_0251 PF00596 Class II Aldolase and Adducin N-terminal domain PA257_0252 PF01381 Helix-turn-helix PA257_0252 PF08671 Anti-repressor SinI PA257_0253 PF01144 Coenzyme A transferase PA257_0254 PF01144 Coenzyme A transferase PA257_0255 PF02803 Thiolase, C-terminal domain PA257_0255 PF00108 Thiolase, N-terminal domain PA257_0256 PF00083 Sugar (and other) transporter PA257_0257 PF10397 Adenylosuccinate lyase C-terminus PA257_0257 PF00206 Lyase PA257_0258 PF12146 Serine aminopeptidase, S33 PA257_0259 PF02627 Carboxymuconolactone decarboxylase family PA257_0260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0260 PF03466 LysR substrate binding domain PA257_0262 PF07690 Major Facilitator Superfamily PA257_0264 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PA257_0264 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PA257_0267 PF03573 outer membrane porin, OprD family PA257_0268 PF07690 Major Facilitator Superfamily PA257_0269 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PA257_0270 PF00440 Bacterial regulatory proteins, tetR family PA257_0270 PF17938 Tetracyclin repressor-like, C-terminal domain PA257_0271 PF08501 Shikimate dehydrogenase substrate binding domain PA257_0271 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PA257_0272 PF01220 Dehydroquinase class II PA257_0273 PF07690 Major Facilitator Superfamily PA257_0274 PF01494 FAD binding domain PA257_0278 PF00571 CBS domain PA257_0278 PF01769 Divalent cation transporter PA257_0278 PF03448 MgtE intracellular N domain PA257_0281 PF01047 MarR family PA257_0282 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase PA257_0284 PF06912 Protein of unknown function (DUF1275) PA257_0295 PF04717 Type VI secretion system, phage-baseplate injector PA257_0296 PF05638 Type VI secretion system effector, Hcp PA257_0297 PF13610 DDE domain PA257_0299 PF00809 Pterin binding enzyme PA257_0300 PF13495 Phage integrase, N-terminal SAM-like domain PA257_0300 PF00589 Phage integrase family PA257_0302 PF07690 Major Facilitator Superfamily PA257_0304 PF00440 Bacterial regulatory proteins, tetR family PA257_0304 PF02909 Tetracyclin repressor-like, C-terminal domain PA257_0305 PF07690 Major Facilitator Superfamily PA257_0306 PF00809 Pterin binding enzyme PA257_0307 PF01909 Nucleotidyltransferase domain PA257_0307 PF13427 Domain of unknown function (DUF4111) PA257_0308 PF00905 Penicillin binding protein transpeptidase domain PA257_0309 PF00589 Phage integrase family PA257_0309 PF13495 Phage integrase, N-terminal SAM-like domain PA257_0310 PF00239 Resolvase, N terminal domain PA257_0310 PF02796 Helix-turn-helix domain of resolvase PA257_0311 PF09278 MerR, DNA binding PA257_0311 PF00376 MerR family regulatory protein PA257_0312 PF02411 MerT mercuric transport protein PA257_0313 PF00403 Heavy-metal-associated domain PA257_0314 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PA257_0314 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_0314 PF00403 Heavy-metal-associated domain PA257_0315 PF13411 MerR HTH family regulatory protein PA257_0316 PF05052 MerE protein PA257_0317 PF00563 EAL domain PA257_0317 PF00990 Diguanylate cyclase, GGDEF domain PA257_0317 PF03707 Bacterial signalling protein N terminal repeat PA257_0318 PF02796 Helix-turn-helix domain of resolvase PA257_0318 PF00239 Resolvase, N terminal domain PA257_0319 PF01526 Tn3 transposase DDE domain PA257_0319 PF13700 Domain of unknown function (DUF4158) PA257_0320 PF00589 Phage integrase family PA257_0328 PF00171 Aldehyde dehydrogenase family PA257_0330 PF00202 Aminotransferase class-III PA257_0331 PF00072 Response regulator receiver domain PA257_0332 PF00392 Bacterial regulatory proteins, gntR family PA257_0332 PF00155 Aminotransferase class I and II PA257_0333 PF02627 Carboxymuconolactone decarboxylase family PA257_0336 PF03466 LysR substrate binding domain PA257_0336 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0337 PF07690 Major Facilitator Superfamily PA257_0341 PF01435 Peptidase family M48 PA257_0344 PF12857 TOBE-like domain PA257_0344 PF00005 ABC transporter PA257_0345 PF00528 Binding-protein-dependent transport system inner membrane component PA257_0346 PF00528 Binding-protein-dependent transport system inner membrane component PA257_0350 PF00563 EAL domain PA257_0350 PF00990 Diguanylate cyclase, GGDEF domain PA257_0350 PF03707 Bacterial signalling protein N terminal repeat PA257_0351 PF03707 Bacterial signalling protein N terminal repeat PA257_0351 PF00990 Diguanylate cyclase, GGDEF domain PA257_0351 PF00563 EAL domain PA257_0354 PF00491 Arginase family PA257_0355 PF03466 LysR substrate binding domain PA257_0355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0356 PF00990 Diguanylate cyclase, GGDEF domain PA257_0356 PF17158 Membrane-associated sensor, integral membrane domain PA257_0357 PF03573 outer membrane porin, OprD family PA257_0358 PF04371 Porphyromonas-type peptidyl-arginine deiminase PA257_0361 PF13416 Bacterial extracellular solute-binding protein PA257_0362 PF00120 Glutamine synthetase, catalytic domain PA257_0363 PF07722 Peptidase C26 PA257_0364 PF00120 Glutamine synthetase, catalytic domain PA257_0365 PF00202 Aminotransferase class-III PA257_0366 PF13416 Bacterial extracellular solute-binding protein PA257_0367 PF13416 Bacterial extracellular solute-binding protein PA257_0368 PF08402 TOBE domain PA257_0368 PF00005 ABC transporter PA257_0369 PF00528 Binding-protein-dependent transport system inner membrane component PA257_0370 PF00528 Binding-protein-dependent transport system inner membrane component PA257_0371 PF01804 Penicillin amidase PA257_0382 PF00497 Bacterial extracellular solute-binding proteins, family 3 PA257_0384 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PA257_0384 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PA257_0385 PF02913 FAD linked oxidases, C-terminal domain PA257_0385 PF01565 FAD binding domain PA257_0386 PF01557 Fumarylacetoacetate (FAA) hydrolase family PA257_0388 PF04076 Bacterial OB fold (BOF) protein PA257_0389 PF00850 Histone deacetylase domain PA257_0390 PF00324 Amino acid permease PA257_0392 PF01547 Bacterial extracellular solute-binding protein PA257_0393 PF00528 Binding-protein-dependent transport system inner membrane component PA257_0394 PF00528 Binding-protein-dependent transport system inner membrane component PA257_0395 PF00005 ABC transporter PA257_0395 PF08402 TOBE domain PA257_0397 PF06977 SdiA-regulated PA257_0398 PF04389 Peptidase family M28 PA257_0399 PF00132 Bacterial transferase hexapeptide (six repeats) PA257_0400 PF07411 Domain of unknown function (DUF1508) PA257_0401 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PA257_0402 PF00291 Pyridoxal-phosphate dependent enzyme PA257_0402 PF00585 C-terminal regulatory domain of Threonine dehydratase PA257_0404 PF11066 Protein of unknown function (DUF2867) PA257_0404 PF13460 NAD(P)H-binding PA257_0408 PF00293 NUDIX domain PA257_0409 PF05524 PEP-utilising enzyme, N-terminal PA257_0409 PF02896 PEP-utilising enzyme, TIM barrel domain PA257_0409 PF00391 PEP-utilising enzyme, mobile domain PA257_0409 PF01590 GAF domain PA257_0410 PF00990 Diguanylate cyclase, GGDEF domain PA257_0410 PF08448 PAS fold PA257_0412 PF01925 Sulfite exporter TauE/SafE PA257_0413 PF01790 Prolipoprotein diacylglyceryl transferase PA257_0415 PF00303 Thymidylate synthase PA257_0420 PF03009 Glycerophosphoryl diester phosphodiesterase family PA257_0423 PF00186 Dihydrofolate reductase PA257_0424 PF12850 Calcineurin-like phosphoesterase superfamily domain PA257_0425 PF00860 Permease family PA257_0426 PF00920 Dehydratase family PA257_0428 PF10672 S-adenosylmethionine-dependent methyltransferase PA257_0428 PF17785 PUA-like domain PA257_0429 PF01965 DJ-1/PfpI family PA257_0431 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PA257_0431 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PA257_0431 PF06827 Zinc finger found in FPG and IleRS PA257_0437 PF00037 4Fe-4S binding domain PA257_0438 PF01467 Cytidylyltransferase-like PA257_0439 PF05199 GMC oxidoreductase PA257_0439 PF00732 GMC oxidoreductase PA257_0441 PF00171 Aldehyde dehydrogenase family PA257_0442 PF00440 Bacterial regulatory proteins, tetR family PA257_0444 PF00561 alpha/beta hydrolase fold PA257_0447 PF05193 Peptidase M16 inactive domain PA257_0448 PF00675 Insulinase (Peptidase family M16) PA257_0448 PF05193 Peptidase M16 inactive domain PA257_0449 PF02881 SRP54-type protein, helical bundle domain PA257_0449 PF00448 SRP54-type protein, GTPase domain PA257_0450 PF00005 ABC transporter PA257_0451 PF18075 FtsX extracellular domain PA257_0452 PF04542 Sigma-70 region 2 PA257_0452 PF04545 Sigma-70, region 4 PA257_0452 PF00140 Sigma-70 factor, region 1.2 PA257_0454 PF00912 Transglycosylase PA257_0455 PF04241 Protein of unknown function (DUF423) PA257_0456 PF02597 ThiS family PA257_0456 PF05690 Thiazole biosynthesis protein ThiG PA257_0457 PF05690 Thiazole biosynthesis protein ThiG PA257_0458 PF02390 Putative methyltransferase PA257_0459 PF07044 Protein of unknown function (DUF1329) PA257_0462 PF06969 HemN C-terminal domain PA257_0462 PF04055 Radical SAM superfamily PA257_0463 PF01725 Ham1 family PA257_0465 PF00561 alpha/beta hydrolase fold PA257_0465 PF07021 Methionine biosynthesis protein MetW PA257_0466 PF00561 alpha/beta hydrolase fold PA257_0467 PF01926 50S ribosome-binding GTPase PA257_0467 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PA257_0468 PF02594 Uncharacterised ACR, YggU family COG1872 PA257_0469 PF02325 YGGT family PA257_0470 PF14748 Pyrroline-5-carboxylate reductase dimerisation PA257_0470 PF03807 NADP oxidoreductase coenzyme F420-dependent PA257_0471 PF01168 Alanine racemase, N-terminal domain PA257_0472 PF00437 Type II/IV secretion system protein PA257_0473 PF00437 Type II/IV secretion system protein PA257_0474 PF01545 Cation efflux family PA257_0476 PF00291 Pyridoxal-phosphate dependent enzyme PA257_0476 PF00571 CBS domain PA257_0496 PF10124 Mu-like prophage major head subunit gpT PA257_0503 PF05069 Phage virion morphogenesis family PA257_0504 PF04233 Phage Mu protein F like protein PA257_0505 PF06074 Protein of unknown function (DUF935) PA257_0523 PF07352 Bacteriophage Mu Gam like protein PA257_0535 PF01053 Cys/Met metabolism PLP-dependent enzyme PA257_0536 PF01979 Amidohydrolase family PA257_0537 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PA257_0537 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PA257_0538 PF00156 Phosphoribosyl transferase domain PA257_0539 PF03652 Holliday junction resolvase PA257_0540 PF02622 Uncharacterized ACR, COG1678 PA257_0542 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain PA257_0542 PF02951 Prokaryotic glutathione synthetase, N-terminal domain PA257_0543 PF00072 Response regulator receiver domain PA257_0544 PF00072 Response regulator receiver domain PA257_0545 PF01584 CheW-like domain PA257_0546 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_0546 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term PA257_0547 PF01739 CheR methyltransferase, SAM binding domain PA257_0547 PF03705 CheR methyltransferase, all-alpha domain PA257_0548 PF01584 CheW-like domain PA257_0548 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_0548 PF00072 Response regulator receiver domain PA257_0548 PF01627 Hpt domain PA257_0549 PF01339 CheB methylesterase PA257_0552 PF01810 LysE type translocator PA257_0554 PF04452 RNA methyltransferase PA257_0555 PF00202 Aminotransferase class-III PA257_0558 PF01292 Prokaryotic cytochrome b561 PA257_0559 PF04264 YceI-like domain PA257_0560 PF01047 MarR family PA257_0561 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PA257_0561 PF00529 HlyD membrane-fusion protein of T1SS PA257_0562 PF00873 AcrB/AcrD/AcrF family PA257_0563 PF02321 Outer membrane efflux protein PA257_0563 PF08139 Prokaryotic membrane lipoprotein lipid attachment site PA257_0564 PF00271 Helicase conserved C-terminal domain PA257_0564 PF00270 DEAD/DEAH box helicase PA257_0566 PF02219 Methylenetetrahydrofolate reductase PA257_0567 PF13291 ACT domain PA257_0567 PF02824 TGS domain PA257_0567 PF04607 Region found in RelA / SpoT proteins PA257_0568 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PA257_0568 PF05221 S-adenosyl-L-homocysteine hydrolase PA257_0571 PF07660 Secretin and TonB N terminus short domain PA257_0571 PF00593 TonB dependent receptor PA257_0571 PF07715 TonB-dependent Receptor Plug Domain PA257_0573 PF00440 Bacterial regulatory proteins, tetR family PA257_0573 PF08362 YcdC-like protein, C-terminal region PA257_0574 PF07969 Amidohydrolase family PA257_0575 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PA257_0577 PF01180 Dihydroorotate dehydrogenase PA257_0578 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_0578 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PA257_0579 PF01979 Amidohydrolase family PA257_0582 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PA257_0583 PF07687 Peptidase dimerisation domain PA257_0583 PF01546 Peptidase family M20/M25/M40 PA257_0584 PF02515 CoA-transferase family III PA257_0585 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_0585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_0585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_0586 PF03466 LysR substrate binding domain PA257_0586 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0588 PF01384 Phosphate transporter family PA257_0590 PF01145 SPFH domain / Band 7 family PA257_0590 PF16200 C-terminal region of band_7 PA257_0592 PF12805 FUSC-like inner membrane protein yccS PA257_0593 PF00270 DEAD/DEAH box helicase PA257_0593 PF03880 DbpA RNA binding domain PA257_0593 PF00271 Helicase conserved C-terminal domain PA257_0594 PF00313 'Cold-shock' DNA-binding domain PA257_0595 PF08443 RimK-like ATP-grasp domain PA257_0595 PF18030 RimK PreATP-grasp domain PA257_0596 PF07690 Major Facilitator Superfamily PA257_0598 PF17871 AAA lid domain PA257_0598 PF02861 Clp amino terminal domain, pathogenicity island component PA257_0598 PF00004 ATPase family associated with various cellular activities (AAA) PA257_0598 PF10431 C-terminal, D2-small domain, of ClpB protein PA257_0598 PF07724 AAA domain (Cdc48 subfamily) PA257_0600 PF01553 Acyltransferase PA257_0602 PF00072 Response regulator receiver domain PA257_0602 PF00486 Transcriptional regulatory protein, C terminal PA257_0603 PF00672 HAMP domain PA257_0603 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_0603 PF00512 His Kinase A (phospho-acceptor) domain PA257_0604 PF06123 Inner membrane protein CreD PA257_0611 PF07715 TonB-dependent Receptor Plug Domain PA257_0611 PF00593 TonB dependent receptor PA257_0612 PF16220 Domain of unknown function (DUF4880) PA257_0612 PF04773 FecR protein PA257_0613 PF00043 Glutathione S-transferase, C-terminal domain PA257_0613 PF13417 Glutathione S-transferase, N-terminal domain PA257_0614 PF03061 Thioesterase superfamily PA257_0615 PF00440 Bacterial regulatory proteins, tetR family PA257_0616 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PA257_0617 PF03466 LysR substrate binding domain PA257_0617 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0620 PF12146 Serine aminopeptidase, S33 PA257_0622 PF01274 Malate synthase PA257_0625 PF00892 EamA-like transporter family PA257_0626 PF01636 Phosphotransferase enzyme family PA257_0627 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0627 PF03459 TOBE domain PA257_0628 PF10043 Predicted periplasmic lipoprotein (DUF2279) PA257_0629 PF00156 Phosphoribosyl transferase domain PA257_0631 PF03466 LysR substrate binding domain PA257_0631 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0632 PF03746 LamB/YcsF family PA257_0633 PF00364 Biotin-requiring enzyme PA257_0634 PF00289 Biotin carboxylase, N-terminal domain PA257_0634 PF02785 Biotin carboxylase C-terminal domain PA257_0634 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PA257_0636 PF02626 Carboxyltransferase domain, subdomain A and B PA257_0639 PF06968 Biotin and Thiamin Synthesis associated domain PA257_0639 PF04055 Radical SAM superfamily PA257_0640 PF00155 Aminotransferase class I and II PA257_0641 PF12697 Alpha/beta hydrolase family PA257_0641 PF08241 Methyltransferase domain PA257_0642 PF08241 Methyltransferase domain PA257_0646 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_0646 PF12806 Acetyl-CoA dehydrogenase C-terminal like PA257_0646 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_0646 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_0647 PF12806 Acetyl-CoA dehydrogenase C-terminal like PA257_0647 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_0647 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_0647 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_0649 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_0649 PF12806 Acetyl-CoA dehydrogenase C-terminal like PA257_0649 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_0649 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_0651 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PA257_0651 PF14824 Sirohaem biosynthesis protein central PA257_0651 PF10414 Sirohaem synthase dimerisation region PA257_0652 PF04055 Radical SAM superfamily PA257_0652 PF06463 Molybdenum Cofactor Synthesis C PA257_0653 PF17805 AsnC-like ligand binding domain PA257_0654 PF17805 AsnC-like ligand binding domain PA257_0655 PF17805 AsnC-like ligand binding domain PA257_0656 PF17805 AsnC-like ligand binding domain PA257_0656 PF13404 AsnC-type helix-turn-helix domain PA257_0658 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PA257_0659 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PA257_0660 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PA257_0661 PF07728 AAA domain (dynein-related subfamily) PA257_0661 PF08406 CbbQ/NirQ/NorQ C-terminal PA257_0662 PF00510 Cytochrome c oxidase subunit III PA257_0663 PF03626 Prokaryotic Cytochrome C oxidase subunit IV PA257_0664 PF00034 Cytochrome c PA257_0665 PF00115 Cytochrome C and Quinol oxidase polypeptide I PA257_0668 PF13545 Crp-like helix-turn-helix domain PA257_0668 PF00027 Cyclic nucleotide-binding domain PA257_0669 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0669 PF03466 LysR substrate binding domain PA257_0670 PF03473 MOSC domain PA257_0670 PF03475 3-alpha domain PA257_0672 PF00202 Aminotransferase class-III PA257_0673 PF00117 Glutamine amidotransferase class-I PA257_0675 PF00196 Bacterial regulatory proteins, luxR family PA257_0677 PF01266 FAD dependent oxidoreductase PA257_0679 PF04536 TPM domain PA257_0681 PF02600 Disulfide bond formation protein DsbB PA257_0689 PF02773 S-adenosylmethionine synthetase, C-terminal domain PA257_0689 PF00438 S-adenosylmethionine synthetase, N-terminal domain PA257_0689 PF02772 S-adenosylmethionine synthetase, central domain PA257_0691 PF02779 Transketolase, pyrimidine binding domain PA257_0691 PF02780 Transketolase, C-terminal domain PA257_0691 PF00456 Transketolase, thiamine diphosphate binding domain PA257_0693 PF01261 Xylose isomerase-like TIM barrel PA257_0694 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PA257_0694 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PA257_0695 PF00162 Phosphoglycerate kinase PA257_0698 PF01116 Fructose-bisphosphate aldolase class-II PA257_0701 PF08241 Methyltransferase domain PA257_0703 PF01863 Protein of unknown function DUF45 PA257_0704 PF13419 Haloacid dehalogenase-like hydrolase PA257_0705 PF05656 Protein of unknown function (DUF805) PA257_0706 PF12833 Helix-turn-helix domain PA257_0706 PF02311 AraC-like ligand binding domain PA257_0707 PF02627 Carboxymuconolactone decarboxylase family PA257_0709 PF01679 Proteolipid membrane potential modulator PA257_0714 PF09234 Domain of unknown function (DUF1963) PA257_0715 PF18642 Immunomodulating metalloprotease helical domain PA257_0715 PF13402 Peptidase M60, enhancin and enhancin-like PA257_0715 PF18650 Immunomodulating metalloprotease N-terminal domain PA257_0722 PF00990 Diguanylate cyclase, GGDEF domain PA257_0722 PF00563 EAL domain PA257_0722 PF03707 Bacterial signalling protein N terminal repeat PA257_0723 PF04546 Sigma-70, non-essential region PA257_0723 PF03979 Sigma-70 factor, region 1.1 PA257_0723 PF00140 Sigma-70 factor, region 1.2 PA257_0723 PF04542 Sigma-70 region 2 PA257_0723 PF04539 Sigma-70 region 3 PA257_0723 PF04545 Sigma-70, region 4 PA257_0725 PF10410 DnaB-helicase binding domain of primase PA257_0725 PF01807 CHC2 zinc finger PA257_0725 PF08275 DNA primase catalytic core, N-terminal domain PA257_0725 PF13662 Toprim domain PA257_0725 PF08278 DNA primase DnaG DnaB-binding PA257_0727 PF01165 Ribosomal protein S21 PA257_0728 PF00814 Glycoprotease family PA257_0729 PF02660 Glycerol-3-phosphate acyltransferase PA257_0730 PF02152 Dihydroneopterin aldolase PA257_0732 PF12627 Probable RNA and SrmB- binding site of polymerase A PA257_0732 PF01966 HD domain PA257_0732 PF01743 Poly A polymerase head domain PA257_0734 PF04293 SpoVR like protein PA257_0735 PF04285 Protein of unknown function (DUF444) PA257_0736 PF06798 PrkA serine protein kinase C-terminal domain PA257_0736 PF08298 PrkA AAA domain PA257_0738 PF00581 Rhodanese-like domain PA257_0739 PF00149 Calcineurin-like phosphoesterase PA257_0740 PF04379 ApaG domain PA257_0741 PF00398 Ribosomal RNA adenine dimethylase PA257_0742 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PA257_0743 PF09312 SurA N-terminal domain PA257_0743 PF00639 PPIC-type PPIASE domain PA257_0744 PF03968 OstA-like protein PA257_0744 PF04453 LPS transport system D PA257_0745 PF01636 Phosphotransferase enzyme family PA257_0746 PF00483 Nucleotidyl transferase PA257_0747 PF00226 DnaJ domain PA257_0747 PF05099 Tellurite resistance protein TerB PA257_0749 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_0749 PF07730 Histidine kinase PA257_0750 PF00072 Response regulator receiver domain PA257_0750 PF00196 Bacterial regulatory proteins, luxR family PA257_0752 PF00005 ABC transporter PA257_0752 PF08402 TOBE domain PA257_0754 PF00528 Binding-protein-dependent transport system inner membrane component PA257_0755 PF00528 Binding-protein-dependent transport system inner membrane component PA257_0756 PF00834 Ribulose-phosphate 3 epimerase family PA257_0757 PF13419 Haloacid dehalogenase-like hydrolase PA257_0758 PF04715 Anthranilate synthase component I, N terminal region PA257_0758 PF00425 chorismate binding enzyme PA257_0759 PF11112 Pyocin activator protein PrtN PA257_0760 PF01381 Helix-turn-helix PA257_0760 PF00717 Peptidase S24-like PA257_0763 PF01258 Prokaryotic dksA/traR C4-type zinc finger PA257_0773 PF04984 Phage tail sheath protein subtilisin-like domain PA257_0773 PF17482 Phage tail sheath C-terminal domain PA257_0780 PF00182 Chitinase class I PA257_0784 PF00117 Glutamine amidotransferase class-I PA257_0785 PF00591 Glycosyl transferase family, a/b domain PA257_0785 PF02885 Glycosyl transferase family, helical bundle domain PA257_0786 PF00218 Indole-3-glycerol phosphate synthase PA257_0787 PF00027 Cyclic nucleotide-binding domain PA257_0787 PF13545 Crp-like helix-turn-helix domain PA257_0788 PF02566 OsmC-like protein PA257_0789 PF02675 S-adenosylmethionine decarboxylase PA257_0790 PF03232 Ubiquinone biosynthesis protein COQ7 PA257_0791 PF01230 HIT domain PA257_0792 PF17862 AAA+ lid domain PA257_0792 PF00004 ATPase family associated with various cellular activities (AAA) PA257_0792 PF01434 Peptidase family M41 PA257_0792 PF06480 FtsH Extracellular PA257_0793 PF00106 short chain dehydrogenase PA257_0795 PF03060 Nitronate monooxygenase PA257_0797 PF01118 Semialdehyde dehydrogenase, NAD binding domain PA257_0797 PF02774 Semialdehyde dehydrogenase, dimerisation domain PA257_0800 PF01521 Iron-sulphur cluster biosynthesis PA257_0801 PF03702 Anhydro-N-acetylmuramic acid kinase PA257_0802 PF04225 Opacity-associated protein A LysM-like domain PA257_0802 PF01551 Peptidase family M23 PA257_0803 PF00579 tRNA synthetases class I (W and Y) PA257_0810 PF02237 Biotin protein ligase C terminal domain PA257_0810 PF08279 HTH domain PA257_0810 PF03099 Biotin/lipoate A/B protein ligase family PA257_0811 PF03309 Type III pantothenate kinase PA257_0816 PF03144 Elongation factor Tu domain 2 PA257_0816 PF03143 Elongation factor Tu C-terminal domain PA257_0816 PF00009 Elongation factor Tu GTP binding domain PA257_0819 PF00584 SecE/Sec61-gamma subunits of protein translocation complex PA257_0820 PF02357 Transcription termination factor nusG PA257_0820 PF00467 KOW motif PA257_0821 PF00298 Ribosomal protein L11, RNA binding domain PA257_0821 PF03946 Ribosomal protein L11, N-terminal domain PA257_0822 PF00687 Ribosomal protein L1p/L10e family PA257_0823 PF00466 Ribosomal protein L10 PA257_0824 PF16320 Ribosomal protein L7/L12 dimerisation domain PA257_0824 PF00542 Ribosomal protein L7/L12 C-terminal domain PA257_0825 PF04560 RNA polymerase Rpb2, domain 7 PA257_0825 PF00562 RNA polymerase Rpb2, domain 6 PA257_0825 PF10385 RNA polymerase beta subunit external 1 domain PA257_0825 PF04565 RNA polymerase Rpb2, domain 3 PA257_0825 PF04561 RNA polymerase Rpb2, domain 2 PA257_0825 PF04563 RNA polymerase beta subunit PA257_0826 PF04998 RNA polymerase Rpb1, domain 5 PA257_0826 PF04983 RNA polymerase Rpb1, domain 3 PA257_0826 PF04997 RNA polymerase Rpb1, domain 1 PA257_0826 PF05000 RNA polymerase Rpb1, domain 4 PA257_0826 PF00623 RNA polymerase Rpb1, domain 2 PA257_0827 PF00164 Ribosomal protein S12/S23 PA257_0828 PF00177 Ribosomal protein S7p/S5e PA257_0829 PF00009 Elongation factor Tu GTP binding domain PA257_0829 PF03144 Elongation factor Tu domain 2 PA257_0829 PF14492 Elongation Factor G, domain II PA257_0829 PF00679 Elongation factor G C-terminus PA257_0829 PF03764 Elongation factor G, domain IV PA257_0830 PF03143 Elongation factor Tu C-terminal domain PA257_0830 PF03144 Elongation factor Tu domain 2 PA257_0830 PF00009 Elongation factor Tu GTP binding domain PA257_0831 PF00338 Ribosomal protein S10p/S20e PA257_0832 PF00297 Ribosomal protein L3 PA257_0833 PF00573 Ribosomal protein L4/L1 family PA257_0834 PF00276 Ribosomal protein L23 PA257_0835 PF00181 Ribosomal Proteins L2, RNA binding domain PA257_0835 PF03947 Ribosomal Proteins L2, C-terminal domain PA257_0836 PF00203 Ribosomal protein S19 PA257_0837 PF00237 Ribosomal protein L22p/L17e PA257_0838 PF07650 KH domain PA257_0838 PF00189 Ribosomal protein S3, C-terminal domain PA257_0839 PF00252 Ribosomal protein L16p/L10e PA257_0840 PF00831 Ribosomal L29 protein PA257_0841 PF00366 Ribosomal protein S17 PA257_0842 PF00238 Ribosomal protein L14p/L23e PA257_0843 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PA257_0843 PF00467 KOW motif PA257_0844 PF00673 ribosomal L5P family C-terminus PA257_0844 PF00281 Ribosomal protein L5 PA257_0845 PF00253 Ribosomal protein S14p/S29e PA257_0846 PF00410 Ribosomal protein S8 PA257_0847 PF00347 Ribosomal protein L6 PA257_0848 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PA257_0849 PF03719 Ribosomal protein S5, C-terminal domain PA257_0849 PF00333 Ribosomal protein S5, N-terminal domain PA257_0850 PF00327 Ribosomal protein L30p/L7e PA257_0851 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PA257_0852 PF00344 SecY translocase PA257_0853 PF00444 Ribosomal protein L36 PA257_0854 PF00416 Ribosomal protein S13/S18 PA257_0855 PF00411 Ribosomal protein S11 PA257_0856 PF01479 S4 domain PA257_0856 PF00163 Ribosomal protein S4/S9 N-terminal domain PA257_0857 PF01000 RNA polymerase Rpb3/RpoA insert domain PA257_0857 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PA257_0857 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PA257_0858 PF01196 Ribosomal protein L17 PA257_0859 PF00199 Catalase PA257_0859 PF06628 Catalase-related immune-responsive PA257_0860 PF00210 Ferritin-like domain PA257_0861 PF17760 UvrA interaction domain PA257_0861 PF17755 UvrA DNA-binding domain PA257_0862 PF07690 Major Facilitator Superfamily PA257_0863 PF00436 Single-strand binding protein family PA257_0864 PF00425 chorismate binding enzyme PA257_0865 PF01817 Chorismate mutase type II PA257_0866 PF00975 Thioesterase domain PA257_0867 PF13193 AMP-binding enzyme C-terminal domain PA257_0867 PF00501 AMP-binding enzyme PA257_0868 PF12833 Helix-turn-helix domain PA257_0869 PF00550 Phosphopantetheine attachment site PA257_0869 PF00501 AMP-binding enzyme PA257_0869 PF08242 Methyltransferase domain PA257_0869 PF00668 Condensation domain PA257_0870 PF00501 AMP-binding enzyme PA257_0870 PF08242 Methyltransferase domain PA257_0870 PF00550 Phosphopantetheine attachment site PA257_0870 PF00668 Condensation domain PA257_0872 PF04954 Siderophore-interacting protein PA257_0872 PF00664 ABC transporter transmembrane region PA257_0872 PF08021 Siderophore-interacting FAD-binding domain PA257_0872 PF00005 ABC transporter PA257_0873 PF00005 ABC transporter PA257_0874 PF07715 TonB-dependent Receptor Plug Domain PA257_0874 PF00593 TonB dependent receptor PA257_0876 PF03929 PepSY-associated TM region PA257_0878 PF01494 FAD binding domain PA257_0879 PF01243 Pyridoxamine 5'-phosphate oxidase PA257_0879 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PA257_0880 PF02567 Phenazine biosynthesis-like protein PA257_0881 PF00425 chorismate binding enzyme PA257_0881 PF00117 Glutamine amidotransferase class-I PA257_0882 PF00857 Isochorismatase family PA257_0883 PF01474 Class-II DAHP synthetase family PA257_0884 PF03284 Phenazine biosynthesis protein A/B PA257_0885 PF03284 Phenazine biosynthesis protein A/B PA257_0887 PF00891 O-methyltransferase domain PA257_0887 PF16864 Dimerisation domain PA257_0888 PF02321 Outer membrane efflux protein PA257_0889 PF00873 AcrB/AcrD/AcrF family PA257_0890 PF13533 Biotin-lipoyl like PA257_0892 PF10282 Lactonase, 7-bladed beta-propeller PA257_0893 PF03466 LysR substrate binding domain PA257_0893 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0894 PF03060 Nitronate monooxygenase PA257_0895 PF01820 D-ala D-ala ligase N-terminus PA257_0895 PF07478 D-ala D-ala ligase C-terminus PA257_0896 PF00753 Metallo-beta-lactamase superfamily PA257_0897 PF12806 Acetyl-CoA dehydrogenase C-terminal like PA257_0897 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_0897 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_0897 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_0898 PF13193 AMP-binding enzyme C-terminal domain PA257_0898 PF00501 AMP-binding enzyme PA257_0899 PF00512 His Kinase A (phospho-acceptor) domain PA257_0899 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_0899 PF00989 PAS fold PA257_0900 PF00196 Bacterial regulatory proteins, luxR family PA257_0900 PF00072 Response regulator receiver domain PA257_0902 PF00171 Aldehyde dehydrogenase family PA257_0903 PF00701 Dihydrodipicolinate synthetase family PA257_0904 PF00083 Sugar (and other) transporter PA257_0907 PF00392 Bacterial regulatory proteins, gntR family PA257_0907 PF07729 FCD domain PA257_0908 PF01965 DJ-1/PfpI family PA257_0908 PF12833 Helix-turn-helix domain PA257_0913 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PA257_0913 PF00205 Thiamine pyrophosphate enzyme, central domain PA257_0913 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PA257_0914 PF03573 outer membrane porin, OprD family PA257_0915 PF13649 Methyltransferase domain PA257_0917 PF05698 Bacterial trigger factor protein (TF) C-terminus PA257_0919 PF03466 LysR substrate binding domain PA257_0919 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_0920 PF01042 Endoribonuclease L-PSP PA257_0922 PF01965 DJ-1/PfpI family PA257_0923 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_0924 PF02082 Transcriptional regulator PA257_0925 PF07715 TonB-dependent Receptor Plug Domain PA257_0925 PF07660 Secretin and TonB N terminus short domain PA257_0925 PF00593 TonB dependent receptor PA257_0926 PF00248 Aldo/keto reductase family PA257_0928 PF00392 Bacterial regulatory proteins, gntR family PA257_0928 PF00155 Aminotransferase class I and II PA257_0930 PF01425 Amidase PA257_0932 PF01032 FecCD transport family PA257_0933 PF01032 FecCD transport family PA257_0934 PF01497 Periplasmic binding protein PA257_0935 PF00005 ABC transporter PA257_0938 PF07715 TonB-dependent Receptor Plug Domain PA257_0940 PF08239 Bacterial SH3 domain PA257_0941 PF00107 Zinc-binding dehydrogenase PA257_0941 PF08240 Alcohol dehydrogenase GroES-like domain PA257_0942 PF00364 Biotin-requiring enzyme PA257_0942 PF00561 alpha/beta hydrolase fold PA257_0943 PF02780 Transketolase, C-terminal domain PA257_0943 PF02779 Transketolase, pyrimidine binding domain PA257_0944 PF00676 Dehydrogenase E1 component PA257_0945 PF01513 ATP-NAD kinase PA257_0948 PF01590 GAF domain PA257_0948 PF02954 Bacterial regulatory protein, Fis family PA257_0948 PF00158 Sigma-54 interaction domain PA257_0952 PF00664 ABC transporter transmembrane region PA257_0952 PF00005 ABC transporter PA257_0952 PF03412 Peptidase C39 family PA257_0959 PF00579 tRNA synthetases class I (W and Y) PA257_0960 PF03573 outer membrane porin, OprD family PA257_0961 PF07690 Major Facilitator Superfamily PA257_0963 PF01047 MarR family PA257_0965 PF00115 Cytochrome C and Quinol oxidase polypeptide I PA257_0966 PF00392 Bacterial regulatory proteins, gntR family PA257_0966 PF00155 Aminotransferase class I and II PA257_0967 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase PA257_0967 PF12801 4Fe-4S binding domain PA257_0967 PF13746 4Fe-4S dicluster domain PA257_0969 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PA257_0969 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PA257_0971 PF03328 HpcH/HpaI aldolase/citrate lyase family PA257_0972 PF01557 Fumarylacetoacetate (FAA) hydrolase family PA257_0973 PF07690 Major Facilitator Superfamily PA257_0974 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase PA257_0975 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PA257_0976 PF00171 Aldehyde dehydrogenase family PA257_0977 PF01557 Fumarylacetoacetate (FAA) hydrolase family PA257_0978 PF01557 Fumarylacetoacetate (FAA) hydrolase family PA257_0997 PF10124 Mu-like prophage major head subunit gpT PA257_1002 PF06074 Protein of unknown function (DUF935) PA257_1003 PF03237 Terminase-like family PA257_1005 PF08461 Ribonuclease R winged-helix domain PA257_1008 PF01464 Transglycosylase SLT domain PA257_1008 PF14718 Soluble lytic murein transglycosylase L domain PA257_1019 PF00005 ABC transporter PA257_1031 PF08765 Mor transcription activator family PA257_1032 PF01636 Phosphotransferase enzyme family PA257_1034 PF00512 His Kinase A (phospho-acceptor) domain PA257_1034 PF01590 GAF domain PA257_1034 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_1034 PF08446 PAS fold PA257_1034 PF00360 Phytochrome region PA257_1036 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases PA257_1036 PF11892 Domain of unknown function (DUF3412) PA257_1036 PF03641 Possible lysine decarboxylase PA257_1038 PF07690 Major Facilitator Superfamily PA257_1040 PF00512 His Kinase A (phospho-acceptor) domain PA257_1040 PF01627 Hpt domain PA257_1040 PF00072 Response regulator receiver domain PA257_1040 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PA257_1040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_1040 PF00672 HAMP domain PA257_1042 PF00144 Beta-lactamase PA257_1043 PF03466 LysR substrate binding domain PA257_1043 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1044 PF11871 Domain of unknown function (DUF3391) PA257_1044 PF01966 HD domain PA257_1045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1045 PF03466 LysR substrate binding domain PA257_1047 PF00732 GMC oxidoreductase PA257_1047 PF05199 GMC oxidoreductase PA257_1050 PF08240 Alcohol dehydrogenase GroES-like domain PA257_1050 PF00107 Zinc-binding dehydrogenase PA257_1051 PF07690 Major Facilitator Superfamily PA257_1055 PF01613 Flavin reductase like domain PA257_1056 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal PA257_1056 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal PA257_1059 PF00202 Aminotransferase class-III PA257_1060 PF10703 MoaF N-terminal domain PA257_1060 PF17409 MoaF C-terminal domain PA257_1063 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain PA257_1063 PF02753 Pili assembly chaperone PapD, C-terminal domain PA257_1064 PF13953 PapC C-terminal domain PA257_1064 PF13954 PapC N-terminal domain PA257_1064 PF00577 Outer membrane usher protein PA257_1065 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain PA257_1065 PF02753 Pili assembly chaperone PapD, C-terminal domain PA257_1066 PF05860 haemagglutination activity domain PA257_1068 PF00196 Bacterial regulatory proteins, luxR family PA257_1068 PF00072 Response regulator receiver domain PA257_1069 PF00106 short chain dehydrogenase PA257_1070 PF00550 Phosphopantetheine attachment site PA257_1070 PF00668 Condensation domain PA257_1070 PF13193 AMP-binding enzyme C-terminal domain PA257_1070 PF00501 AMP-binding enzyme PA257_1071 PF09856 Predicted transcriptional regulator (DUF2083) PA257_1071 PF06114 IrrE N-terminal-like domain PA257_1071 PF01381 Helix-turn-helix PA257_1075 PF00171 Aldehyde dehydrogenase family PA257_1077 PF13520 Amino acid permease PA257_1079 PF12833 Helix-turn-helix domain PA257_1079 PF12852 Cupin PA257_1081 PF16363 GDP-mannose 4,6 dehydratase PA257_1082 PF04247 Invasion gene expression up-regulator, SirB PA257_1083 PF03922 OmpW family PA257_1086 PF00005 ABC transporter PA257_1086 PF02687 FtsX-like permease family PA257_1086 PF12704 MacB-like periplasmic core domain PA257_1089 PF00085 Thioredoxin PA257_1093 PF03477 ATP cone domain PA257_1094 PF01872 RibD C-terminal domain PA257_1094 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PA257_1095 PF00677 Lumazine binding domain PA257_1096 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PA257_1096 PF00925 GTP cyclohydrolase II PA257_1097 PF00885 6,7-dimethyl-8-ribityllumazine synthase PA257_1098 PF01029 NusB family PA257_1099 PF02769 AIR synthase related protein, C-terminal domain PA257_1099 PF00586 AIR synthase related protein, N-terminal domain PA257_1100 PF04608 Phosphatidylglycerophosphatase A PA257_1103 PF00925 GTP cyclohydrolase II PA257_1105 PF01497 Periplasmic binding protein PA257_1106 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PA257_1106 PF02779 Transketolase, pyrimidine binding domain PA257_1106 PF02780 Transketolase, C-terminal domain PA257_1107 PF00348 Polyprenyl synthetase PA257_1108 PF02609 Exonuclease VII small subunit PA257_1109 PF13378 Enolase C-terminal domain-like PA257_1113 PF00005 ABC transporter PA257_1115 PF00989 PAS fold PA257_1115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_1115 PF00512 His Kinase A (phospho-acceptor) domain PA257_1115 PF00672 HAMP domain PA257_1115 PF18698 Histidine kinase sensor domain PA257_1117 PF00230 Major intrinsic protein PA257_1119 PF00486 Transcriptional regulatory protein, C terminal PA257_1119 PF00072 Response regulator receiver domain PA257_1120 PF00719 Inorganic pyrophosphatase PA257_1121 PF06167 Glucose-regulated metallo-peptidase M90 PA257_1122 PF09335 SNARE associated Golgi protein PA257_1126 PF00583 Acetyltransferase (GNAT) family PA257_1127 PF05985 Ethanolamine ammonia-lyase light chain (EutC) PA257_1128 PF06751 Ethanolamine ammonia lyase large subunit (EutB) PA257_1129 PF13520 Amino acid permease PA257_1130 PF00171 Aldehyde dehydrogenase family PA257_1131 PF00158 Sigma-54 interaction domain PA257_1131 PF02954 Bacterial regulatory protein, Fis family PA257_1131 PF01590 GAF domain PA257_1132 PF08245 Mur ligase middle domain PA257_1132 PF02875 Mur ligase family, glutamate ligase domain PA257_1132 PF01225 Mur ligase family, catalytic domain PA257_1133 PF02441 Flavoprotein PA257_1135 PF13460 NAD(P)H-binding PA257_1139 PF03788 LrgA family PA257_1140 PF04172 LrgB-like family PA257_1142 PF09335 SNARE associated Golgi protein PA257_1143 PF02245 Methylpurine-DNA glycosylase (MPG) PA257_1146 PF00171 Aldehyde dehydrogenase family PA257_1147 PF01467 Cytidylyltransferase-like PA257_1149 PF02590 Predicted SPOUT methyltransferase PA257_1150 PF00905 Penicillin binding protein transpeptidase domain PA257_1150 PF03717 Penicillin-binding Protein dimerisation domain PA257_1151 PF01098 Cell cycle protein PA257_1152 PF13406 Transglycosylase SLT domain PA257_1153 PF05036 Sporulation related domain PA257_1153 PF03330 Lytic transglycolase PA257_1154 PF07943 Penicillin-binding protein 5, C-terminal domain PA257_1154 PF00768 D-alanyl-D-alanine carboxypeptidase PA257_1155 PF04359 Protein of unknown function (DUF493) PA257_1156 PF03099 Biotin/lipoate A/B protein ligase family PA257_1157 PF04055 Radical SAM superfamily PA257_1157 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PA257_1158 PF03466 LysR substrate binding domain PA257_1158 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1160 PF13406 Transglycosylase SLT domain PA257_1165 PF09334 tRNA synthetases class I (M) PA257_1165 PF08264 Anticodon-binding domain of tRNA PA257_1165 PF00133 tRNA synthetases class I (I, L, M and V) PA257_1165 PF13603 Leucyl-tRNA synthetase, Domain 2 PA257_1167 PF02698 DUF218 domain PA257_1168 PF00795 Carbon-nitrogen hydrolase PA257_1169 PF00571 CBS domain PA257_1169 PF03471 Transporter associated domain PA257_1170 PF02130 Uncharacterized protein family UPF0054 PA257_1171 PF02562 PhoH-like protein PA257_1172 PF04055 Radical SAM superfamily PA257_1172 PF01938 TRAM domain PA257_1172 PF00919 Uncharacterized protein family UPF0004 PA257_1175 PF00202 Aminotransferase class-III PA257_1176 PF02581 Thiamine monophosphate synthase PA257_1177 PF08543 Phosphomethylpyrimidine kinase PA257_1178 PF00072 Response regulator receiver domain PA257_1178 PF01627 Hpt domain PA257_1178 PF00512 His Kinase A (phospho-acceptor) domain PA257_1178 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_1180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_1180 PF18158 Adaptive response protein AidB N-terminal domain PA257_1180 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_1182 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus PA257_1182 PF01048 Phosphorylase superfamily PA257_1184 PF07516 SecA Wing and Scaffold domain PA257_1184 PF01043 SecA preprotein cross-linking domain PA257_1184 PF02810 SEC-C motif PA257_1184 PF07517 SecA DEAD-like domain PA257_1185 PF12706 Beta-lactamase superfamily domain PA257_1186 PF00849 RNA pseudouridylate synthase PA257_1189 PF01037 Lrp/AsnC ligand binding domain PA257_1191 PF16916 Dimerisation domain of Zinc Transporter PA257_1191 PF01545 Cation efflux family PA257_1193 PF00270 DEAD/DEAH box helicase PA257_1193 PF04408 Helicase associated domain (HA2) PA257_1193 PF00271 Helicase conserved C-terminal domain PA257_1193 PF08482 ATP-dependent helicase C-terminal PA257_1197 PF00106 short chain dehydrogenase PA257_1200 PF00296 Luciferase-like monooxygenase PA257_1202 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) PA257_1204 PF00271 Helicase conserved C-terminal domain PA257_1204 PF00270 DEAD/DEAH box helicase PA257_1207 PF00196 Bacterial regulatory proteins, luxR family PA257_1207 PF00072 Response regulator receiver domain PA257_1209 PF13426 PAS domain PA257_1209 PF00563 EAL domain PA257_1209 PF00990 Diguanylate cyclase, GGDEF domain PA257_1210 PF00512 His Kinase A (phospho-acceptor) domain PA257_1210 PF00072 Response regulator receiver domain PA257_1210 PF00989 PAS fold PA257_1210 PF01627 Hpt domain PA257_1210 PF00497 Bacterial extracellular solute-binding proteins, family 3 PA257_1210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_1211 PF13302 Acetyltransferase (GNAT) domain PA257_1212 PF13302 Acetyltransferase (GNAT) domain PA257_1216 PF00216 Bacterial DNA-binding protein PA257_1218 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PA257_1219 PF00005 ABC transporter PA257_1220 PF00528 Binding-protein-dependent transport system inner membrane component PA257_1221 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PA257_1222 PF03169 OPT oligopeptide transporter protein PA257_1223 PF02028 BCCT, betaine/carnitine/choline family transporter PA257_1224 PF00158 Sigma-54 interaction domain PA257_1225 PF03180 NLPA lipoprotein PA257_1227 PF01654 Cytochrome bd terminal oxidase subunit I PA257_1228 PF02322 Cytochrome bd terminal oxidase subunit II PA257_1230 PF12833 Helix-turn-helix domain PA257_1230 PF02311 AraC-like ligand binding domain PA257_1232 PF00108 Thiolase, N-terminal domain PA257_1232 PF02803 Thiolase, C-terminal domain PA257_1233 PF00501 AMP-binding enzyme PA257_1233 PF13193 AMP-binding enzyme C-terminal domain PA257_1236 PF07044 Protein of unknown function (DUF1329) PA257_1238 PF17874 MalT-like TPR region PA257_1238 PF00196 Bacterial regulatory proteins, luxR family PA257_1239 PF00403 Heavy-metal-associated domain PA257_1241 PF13638 PIN domain PA257_1241 PF02562 PhoH-like protein PA257_1245 PF01967 MoaC family PA257_1246 PF02597 ThiS family PA257_1247 PF02391 MoaE protein PA257_1248 PF00994 Probable molybdopterin binding domain PA257_1249 PF00994 Probable molybdopterin binding domain PA257_1249 PF03453 MoeA N-terminal region (domain I and II) PA257_1249 PF03454 MoeA C-terminal region (domain IV) PA257_1253 PF16655 PhoD-like phosphatase, N-terminal domain PA257_1253 PF09423 PhoD-like phosphatase PA257_1260 PF00009 Elongation factor Tu GTP binding domain PA257_1260 PF03144 Elongation factor Tu domain 2 PA257_1260 PF16658 Class II release factor RF3, C-terminal domain PA257_1262 PF07660 Secretin and TonB N terminus short domain PA257_1262 PF07715 TonB-dependent Receptor Plug Domain PA257_1262 PF00593 TonB dependent receptor PA257_1263 PF04773 FecR protein PA257_1263 PF16220 Domain of unknown function (DUF4880) PA257_1264 PF08281 Sigma-70, region 4 PA257_1264 PF04542 Sigma-70 region 2 PA257_1265 PF01965 DJ-1/PfpI family PA257_1265 PF12833 Helix-turn-helix domain PA257_1266 PF00892 EamA-like transporter family PA257_1267 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PA257_1267 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PA257_1268 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1268 PF03466 LysR substrate binding domain PA257_1269 PF02321 Outer membrane efflux protein PA257_1270 PF04632 Fusaric acid resistance protein family PA257_1272 PF00529 HlyD membrane-fusion protein of T1SS PA257_1272 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PA257_1273 PF00005 ABC transporter PA257_1273 PF00571 CBS domain PA257_1274 PF00528 Binding-protein-dependent transport system inner membrane component PA257_1275 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PA257_1276 PF00528 Binding-protein-dependent transport system inner membrane component PA257_1277 PF00999 Sodium/hydrogen exchanger family PA257_1282 PF00106 short chain dehydrogenase PA257_1283 PF08241 Methyltransferase domain PA257_1286 PF00072 Response regulator receiver domain PA257_1286 PF00196 Bacterial regulatory proteins, luxR family PA257_1287 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_1287 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term PA257_1287 PF07730 Histidine kinase PA257_1287 PF00672 HAMP domain PA257_1288 PF07690 Major Facilitator Superfamily PA257_1290 PF07690 Major Facilitator Superfamily PA257_1291 PF14710 Respiratory nitrate reductase alpha N-terminal PA257_1291 PF00384 Molybdopterin oxidoreductase PA257_1291 PF01568 Molydopterin dinucleotide binding domain PA257_1292 PF13247 4Fe-4S dicluster domain PA257_1292 PF14711 Respiratory nitrate reductase beta C-terminal PA257_1293 PF02613 Nitrate reductase delta subunit PA257_1294 PF02665 Nitrate reductase gamma subunit PA257_1295 PF09312 SurA N-terminal domain PA257_1296 PF06463 Molybdenum Cofactor Synthesis C PA257_1296 PF04055 Radical SAM superfamily PA257_1298 PF07715 TonB-dependent Receptor Plug Domain PA257_1298 PF00593 TonB dependent receptor PA257_1299 PF00497 Bacterial extracellular solute-binding proteins, family 3 PA257_1300 PF08348 YheO-like PAS domain PA257_1300 PF13309 HTH domain PA257_1301 PF01266 FAD dependent oxidoreductase PA257_1302 PF02423 Ornithine cyclodeaminase/mu-crystallin family PA257_1303 PF00271 Helicase conserved C-terminal domain PA257_1303 PF00270 DEAD/DEAH box helicase PA257_1305 PF13193 AMP-binding enzyme C-terminal domain PA257_1305 PF00501 AMP-binding enzyme PA257_1306 PF02230 Phospholipase/Carboxylesterase PA257_1307 PF00497 Bacterial extracellular solute-binding proteins, family 3 PA257_1308 PF01066 CDP-alcohol phosphatidyltransferase PA257_1311 PF01541 GIY-YIG catalytic domain PA257_1312 PF00132 Bacterial transferase hexapeptide (six repeats) PA257_1316 PF04245 37-kD nucleoid-associated bacterial protein PA257_1320 PF03466 LysR substrate binding domain PA257_1320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1322 PF08240 Alcohol dehydrogenase GroES-like domain PA257_1322 PF00107 Zinc-binding dehydrogenase PA257_1326 PF05971 RNA methyltransferase PA257_1327 PF02080 TrkA-C domain PA257_1327 PF03600 Citrate transporter PA257_1328 PF00005 ABC transporter PA257_1329 PF02653 Branched-chain amino acid transport system / permease component PA257_1332 PF08264 Anticodon-binding domain of tRNA PA257_1332 PF00133 tRNA synthetases class I (I, L, M and V) PA257_1332 PF10458 Valyl tRNA synthetase tRNA binding arm PA257_1334 PF04364 DNA polymerase III chi subunit, HolC PA257_1335 PF02789 Cytosol aminopeptidase family, N-terminal domain PA257_1335 PF00883 Cytosol aminopeptidase family, catalytic domain PA257_1336 PF12833 Helix-turn-helix domain PA257_1336 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PA257_1338 PF03739 Lipopolysaccharide export system permease LptF/LptG PA257_1339 PF03739 Lipopolysaccharide export system permease LptF/LptG PA257_1341 PF00563 EAL domain PA257_1341 PF12792 CSS motif domain associated with EAL PA257_1344 PF02547 Queuosine biosynthesis protein PA257_1345 PF01702 Queuine tRNA-ribosyltransferase PA257_1346 PF02699 Preprotein translocase subunit PA257_1347 PF13721 SecD export protein N-terminal TM region PA257_1347 PF07549 SecD/SecF GG Motif PA257_1347 PF02355 Protein export membrane protein PA257_1348 PF02355 Protein export membrane protein PA257_1348 PF07549 SecD/SecF GG Motif PA257_1349 PF05433 Glycine zipper 2TM domain PA257_1350 PF00459 Inositol monophosphatase family PA257_1351 PF00588 SpoU rRNA Methylase family PA257_1352 PF00132 Bacterial transferase hexapeptide (six repeats) PA257_1352 PF06426 Serine acetyltransferase, N-terminal PA257_1353 PF02082 Transcriptional regulator PA257_1354 PF00266 Aminotransferase class-V PA257_1355 PF01592 NifU-like N terminal domain PA257_1356 PF01521 Iron-sulphur cluster biosynthesis PA257_1357 PF00226 DnaJ domain PA257_1357 PF07743 HSCB C-terminal oligomerisation domain PA257_1358 PF00012 Hsp70 protein PA257_1359 PF00111 2Fe-2S iron-sulfur cluster binding domain PA257_1360 PF04384 Iron-sulphur cluster assembly PA257_1361 PF00334 Nucleoside diphosphate kinase PA257_1362 PF04055 Radical SAM superfamily PA257_1364 PF13464 Domain of unknown function (DUF4115) PA257_1365 PF04551 GcpE protein PA257_1366 PF13393 Histidyl-tRNA synthetase PA257_1366 PF03129 Anticodon binding domain PA257_1368 PF13360 PQQ-like domain PA257_1369 PF01926 50S ribosome-binding GTPase PA257_1369 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PA257_1370 PF00155 Aminotransferase class I and II PA257_1371 PF00795 Carbon-nitrogen hydrolase PA257_1373 PF00248 Aldo/keto reductase family PA257_1376 PF00682 HMGL-like PA257_1376 PF08502 LeuA allosteric (dimerisation) domain PA257_1380 PF07715 TonB-dependent Receptor Plug Domain PA257_1380 PF00593 TonB dependent receptor PA257_1383 PF01551 Peptidase family M23 PA257_1383 PF08525 Opacity-associated protein A N-terminal motif PA257_1383 PF01476 LysM domain PA257_1385 PF04314 Copper chaperone PCu(A)C PA257_1387 PF00857 Isochorismatase family PA257_1388 PF12833 Helix-turn-helix domain PA257_1388 PF01965 DJ-1/PfpI family PA257_1390 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PA257_1392 PF03480 Bacterial extracellular solute-binding protein, family 7 PA257_1393 PF03466 LysR substrate binding domain PA257_1393 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1394 PF02601 Exonuclease VII, large subunit PA257_1394 PF13742 OB-fold nucleic acid binding domain PA257_1395 PF03466 LysR substrate binding domain PA257_1395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1397 PF00850 Histone deacetylase domain PA257_1400 PF00072 Response regulator receiver domain PA257_1400 PF00196 Bacterial regulatory proteins, luxR family PA257_1401 PF00571 CBS domain PA257_1401 PF00478 IMP dehydrogenase / GMP reductase domain PA257_1402 PF00117 Glutamine amidotransferase class-I PA257_1402 PF00958 GMP synthase C terminal domain PA257_1402 PF02540 NAD synthase PA257_1403 PF00589 Phage integrase family PA257_1403 PF13356 Arm DNA-binding domain PA257_1412 PF06067 Domain of unknown function (DUF932) PA257_1413 PF05284 Protein of unknown function (DUF736) PA257_1420 PF13614 AAA domain PA257_1423 PF10502 Signal peptidase, peptidase S26 PA257_1425 PF01032 FecCD transport family PA257_1426 PF01032 FecCD transport family PA257_1427 PF00005 ABC transporter PA257_1428 PF01497 Periplasmic binding protein PA257_1429 PF07715 TonB-dependent Receptor Plug Domain PA257_1429 PF00593 TonB dependent receptor PA257_1430 PF02311 AraC-like ligand binding domain PA257_1430 PF12833 Helix-turn-helix domain PA257_1431 PF07690 Major Facilitator Superfamily PA257_1433 PF03466 LysR substrate binding domain PA257_1433 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1435 PF02534 Type IV secretory system Conjugative DNA transfer PA257_1437 PF00437 Type II/IV secretion system protein PA257_1438 PF04956 TrbC/VIRB2 family PA257_1440 PF03135 CagE, TrbE, VirB family, component of type IV transporter system PA257_1443 PF04610 TrbL/VirB6 plasmid conjugal transfer protein PA257_1446 PF03743 Bacterial conjugation TrbI-like protein PA257_1448 PF07731 Multicopper oxidase PA257_1448 PF00394 Multicopper oxidase PA257_1448 PF07732 Multicopper oxidase PA257_1449 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PA257_1453 PF00497 Bacterial extracellular solute-binding proteins, family 3 PA257_1453 PF01464 Transglycosylase SLT domain PA257_1454 PF02769 AIR synthase related protein, C-terminal domain PA257_1454 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PA257_1454 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal PA257_1456 PF01784 NIF3 (NGG1p interacting factor 3) PA257_1457 PF00367 phosphotransferase system, EIIB PA257_1457 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PA257_1457 PF02378 Phosphotransferase system, EIIC PA257_1458 PF05524 PEP-utilising enzyme, N-terminal PA257_1458 PF00391 PEP-utilising enzyme, mobile domain PA257_1458 PF02896 PEP-utilising enzyme, TIM barrel domain PA257_1458 PF00381 PTS HPr component phosphorylation site PA257_1458 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PA257_1459 PF01380 SIS domain PA257_1460 PF01979 Amidohydrolase family PA257_1461 PF00392 Bacterial regulatory proteins, gntR family PA257_1461 PF07702 UTRA domain PA257_1463 PF09297 NADH pyrophosphatase zinc ribbon domain PA257_1463 PF00293 NUDIX domain PA257_1464 PF00293 NUDIX domain PA257_1465 PF00132 Bacterial transferase hexapeptide (six repeats) PA257_1467 PF02222 ATP-grasp domain PA257_1467 PF01370 NAD dependent epimerase/dehydratase family PA257_1469 PF07690 Major Facilitator Superfamily PA257_1469 PF00083 Sugar (and other) transporter PA257_1470 PF01595 Cyclin M transmembrane N-terminal domain PA257_1470 PF03471 Transporter associated domain PA257_1470 PF00571 CBS domain PA257_1473 PF00448 SRP54-type protein, GTPase domain PA257_1473 PF02881 SRP54-type protein, helical bundle domain PA257_1473 PF02978 Signal peptide binding domain PA257_1474 PF00886 Ribosomal protein S16 PA257_1475 PF01782 RimM N-terminal domain PA257_1475 PF05239 PRC-barrel domain PA257_1476 PF01746 tRNA (Guanine-1)-methyltransferase PA257_1477 PF01245 Ribosomal protein L19 PA257_1478 PF03061 Thioesterase superfamily PA257_1481 PF02899 Phage integrase, N-terminal SAM-like domain PA257_1481 PF00589 Phage integrase family PA257_1482 PF10411 Disulfide bond isomerase protein N-terminus PA257_1482 PF13098 Thioredoxin-like domain PA257_1483 PF01842 ACT domain PA257_1483 PF03447 Homoserine dehydrogenase, NAD binding domain PA257_1483 PF00742 Homoserine dehydrogenase PA257_1484 PF14821 Threonine synthase N terminus PA257_1484 PF00291 Pyridoxal-phosphate dependent enzyme PA257_1487 PF02515 CoA-transferase family III PA257_1492 PF05491 RuvB C-terminal winged helix domain PA257_1492 PF05496 Holliday junction DNA helicase RuvB P-loop domain PA257_1492 PF17864 RuvB AAA lid domain PA257_1494 PF07152 YaeQ protein PA257_1495 PF01368 DHH family PA257_1495 PF02272 DHHA1 domain PA257_1495 PF17768 RecJ OB domain PA257_1497 PF01447 Thermolysin metallopeptidase, catalytic domain PA257_1497 PF02868 Thermolysin metallopeptidase, alpha-helical domain PA257_1497 PF07504 Fungalysin/Thermolysin Propeptide Motif PA257_1497 PF03413 Peptidase propeptide and YPEB domain PA257_1498 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PA257_1504 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PA257_1507 PF00072 Response regulator receiver domain PA257_1507 PF00196 Bacterial regulatory proteins, luxR family PA257_1510 PF03466 LysR substrate binding domain PA257_1510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1511 PF05199 GMC oxidoreductase PA257_1511 PF00732 GMC oxidoreductase PA257_1512 PF07690 Major Facilitator Superfamily PA257_1512 PF00083 Sugar (and other) transporter PA257_1513 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_1513 PF00672 HAMP domain PA257_1513 PF12729 Four helix bundle sensory module for signal transduction PA257_1515 PF01739 CheR methyltransferase, SAM binding domain PA257_1517 PF01584 CheW-like domain PA257_1517 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_1517 PF01627 Hpt domain PA257_1517 PF00072 Response regulator receiver domain PA257_1518 PF00072 Response regulator receiver domain PA257_1518 PF01339 CheB methylesterase PA257_1519 PF00360 Phytochrome region PA257_1519 PF00990 Diguanylate cyclase, GGDEF domain PA257_1519 PF01590 GAF domain PA257_1519 PF00563 EAL domain PA257_1520 PF00472 RF-1 domain PA257_1520 PF03462 PCRF domain PA257_1521 PF01336 OB-fold nucleic acid binding domain PA257_1521 PF00152 tRNA synthetases class II (D, K and N) PA257_1526 PF07634 RtxA repeat PA257_1526 PF11713 Peptidase C80 family PA257_1526 PF11647 Membrane Localization Domain PA257_1526 PF12146 Serine aminopeptidase, S33 PA257_1526 PF16671 Actin cross-linking domain PA257_1528 PF01661 Macro domain PA257_1529 PF00691 OmpA family PA257_1531 PF00403 Heavy-metal-associated domain PA257_1532 PF13411 MerR HTH family regulatory protein PA257_1534 PF00311 Phosphoenolpyruvate carboxylase PA257_1535 PF05191 Adenylate kinase, active site lid PA257_1536 PF00814 Glycoprotease family PA257_1538 PF01904 Protein of unknown function DUF72 PA257_1541 PF04445 Putative SAM-dependent methyltransferase PA257_1544 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PA257_1545 PF00873 AcrB/AcrD/AcrF family PA257_1548 PF01553 Acyltransferase PA257_1549 PF00005 ABC transporter PA257_1553 PF02657 Fe-S metabolism associated domain PA257_1554 PF00266 Aminotransferase class-V PA257_1555 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle PA257_1555 PF14602 Hexapeptide repeat of succinyl-transferase PA257_1556 PF01810 LysE type translocator PA257_1557 PF03960 ArsC family PA257_1561 PF00999 Sodium/hydrogen exchanger family PA257_1562 PF00155 Aminotransferase class I and II PA257_1563 PF01966 HD domain PA257_1563 PF01909 Nucleotidyltransferase domain PA257_1563 PF08335 GlnD PII-uridylyltransferase PA257_1563 PF01842 ACT domain PA257_1564 PF00557 Metallopeptidase family M24 PA257_1565 PF00318 Ribosomal protein S2 PA257_1566 PF00889 Elongation factor TS PA257_1567 PF00696 Amino acid kinase family PA257_1568 PF01765 Ribosome recycling factor PA257_1569 PF01255 Putative undecaprenyl diphosphate synthase PA257_1571 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PA257_1571 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PA257_1571 PF13288 DXP reductoisomerase C-terminal domain PA257_1572 PF02163 Peptidase family M50 PA257_1572 PF17820 PDZ domain PA257_1572 PF13180 PDZ domain PA257_1573 PF01103 Surface antigen PA257_1573 PF07244 Surface antigen variable number repeat PA257_1574 PF03938 Outer membrane protein (OmpH-like) PA257_1575 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PA257_1575 PF00132 Bacterial transferase hexapeptide (six repeats) PA257_1576 PF07977 FabA-like domain PA257_1577 PF00132 Bacterial transferase hexapeptide (six repeats) PA257_1577 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PA257_1578 PF02684 Lipid-A-disaccharide synthetase PA257_1579 PF01351 Ribonuclease HII PA257_1580 PF01235 Sodium:alanine symporter family PA257_1581 PF14579 Helix-hairpin-helix motif PA257_1581 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PA257_1581 PF07733 Bacterial DNA polymerase III alpha NTPase domain PA257_1581 PF01336 OB-fold nucleic acid binding domain PA257_1581 PF02811 PHP domain PA257_1582 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PA257_1583 PF01171 PP-loop family PA257_1583 PF09179 TilS substrate binding domain PA257_1583 PF11734 TilS substrate C-terminal domain PA257_1584 PF06418 CTP synthase N-terminus PA257_1584 PF00117 Glutamine amidotransferase class-I PA257_1585 PF00793 DAHP synthetase I family PA257_1586 PF03952 Enolase, N-terminal domain PA257_1586 PF00113 Enolase, C-terminal TIM barrel domain PA257_1587 PF04977 Septum formation initiator PA257_1588 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PA257_1590 PF04143 Sulphur transport PA257_1591 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1591 PF03466 LysR substrate binding domain PA257_1592 PF00107 Zinc-binding dehydrogenase PA257_1592 PF08240 Alcohol dehydrogenase GroES-like domain PA257_1593 PF00756 Putative esterase PA257_1594 PF02542 YgbB family PA257_1595 PF01142 tRNA pseudouridine synthase D (TruD) PA257_1596 PF01975 Survival protein SurE PA257_1598 PF01476 LysM domain PA257_1598 PF01551 Peptidase family M23 PA257_1599 PF04539 Sigma-70 region 3 PA257_1599 PF04542 Sigma-70 region 2 PA257_1599 PF04545 Sigma-70, region 4 PA257_1599 PF00140 Sigma-70 factor, region 1.2 PA257_1600 PF11953 Domain of unknown function (DUF3470) PA257_1600 PF00037 4Fe-4S binding domain PA257_1601 PF05190 MutS family domain IV PA257_1601 PF00488 MutS domain V PA257_1601 PF01624 MutS domain I PA257_1601 PF05192 MutS domain III PA257_1601 PF05188 MutS domain II PA257_1604 PF00589 Phage integrase family PA257_1604 PF12167 Arm DNA-binding domain PA257_1611 PF11112 Pyocin activator protein PrtN PA257_1640 PF17482 Phage tail sheath C-terminal domain PA257_1640 PF04984 Phage tail sheath protein subtilisin-like domain PA257_1649 PF00182 Chitinase class I PA257_1656 PF02464 Competence-damaged protein PA257_1657 PF00154 recA bacterial DNA recombination protein PA257_1658 PF02631 RecX family PA257_1660 PF10996 Beta-Casp domain PA257_1660 PF00753 Metallo-beta-lactamase superfamily PA257_1660 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PA257_1661 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase PA257_1661 PF09363 XFP C-terminal domain PA257_1661 PF09364 XFP N-terminal domain PA257_1662 PF12843 Putative quorum-sensing-regulated virulence factor PA257_1664 PF13416 Bacterial extracellular solute-binding protein PA257_1665 PF00528 Binding-protein-dependent transport system inner membrane component PA257_1666 PF00528 Binding-protein-dependent transport system inner membrane component PA257_1667 PF00005 ABC transporter PA257_1667 PF08402 TOBE domain PA257_1670 PF00072 Response regulator receiver domain PA257_1670 PF00196 Bacterial regulatory proteins, luxR family PA257_1671 PF01219 Prokaryotic diacylglycerol kinase PA257_1672 PF01645 Conserved region in glutamate synthase PA257_1673 PF01197 Ribosomal protein L31 PA257_1674 PF00444 Ribosomal protein L36 PA257_1676 PF00795 Carbon-nitrogen hydrolase PA257_1677 PF00324 Amino acid permease PA257_1678 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PA257_1678 PF02805 Metal binding domain of Ada PA257_1678 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PA257_1678 PF12833 Helix-turn-helix domain PA257_1679 PF00083 Sugar (and other) transporter PA257_1679 PF07690 Major Facilitator Superfamily PA257_1681 PF03466 LysR substrate binding domain PA257_1681 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1682 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_1682 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_1682 PF18158 Adaptive response protein AidB N-terminal domain PA257_1683 PF02515 CoA-transferase family III PA257_1684 PF00378 Enoyl-CoA hydratase/isomerase PA257_1685 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain PA257_1685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PA257_1685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PA257_1686 PF00108 Thiolase, N-terminal domain PA257_1686 PF02803 Thiolase, C-terminal domain PA257_1687 PF03573 outer membrane porin, OprD family PA257_1688 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1688 PF03466 LysR substrate binding domain PA257_1689 PF00561 alpha/beta hydrolase fold PA257_1690 PF06942 GlpM protein PA257_1691 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PA257_1691 PF01266 FAD dependent oxidoreductase PA257_1692 PF08220 DeoR-like helix-turn-helix domain PA257_1692 PF00455 DeoR C terminal sensor domain PA257_1694 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PA257_1694 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PA257_1695 PF00230 Major intrinsic protein PA257_1696 PF04073 Aminoacyl-tRNA editing domain PA257_1697 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PA257_1697 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PA257_1698 PF02567 Phenazine biosynthesis-like protein PA257_1706 PF00440 Bacterial regulatory proteins, tetR family PA257_1706 PF08361 MAATS-type transcriptional repressor, C-terminal region PA257_1707 PF07690 Major Facilitator Superfamily PA257_1710 PF12833 Helix-turn-helix domain PA257_1710 PF02311 AraC-like ligand binding domain PA257_1711 PF00171 Aldehyde dehydrogenase family PA257_1712 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PA257_1712 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PA257_1713 PF16177 Acetyl-coenzyme A synthetase N-terminus PA257_1713 PF13193 AMP-binding enzyme C-terminal domain PA257_1713 PF00501 AMP-binding enzyme PA257_1714 PF00107 Zinc-binding dehydrogenase PA257_1714 PF08240 Alcohol dehydrogenase GroES-like domain PA257_1716 PF03466 LysR substrate binding domain PA257_1716 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1718 PF01026 TatD related DNase PA257_1719 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PA257_1719 PF00356 Bacterial regulatory proteins, lacI family PA257_1720 PF00381 PTS HPr component phosphorylation site PA257_1720 PF00391 PEP-utilising enzyme, mobile domain PA257_1720 PF05524 PEP-utilising enzyme, N-terminal PA257_1720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PA257_1720 PF02896 PEP-utilising enzyme, TIM barrel domain PA257_1721 PF00294 pfkB family carbohydrate kinase PA257_1722 PF02378 Phosphotransferase system, EIIC PA257_1722 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PA257_1723 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PA257_1723 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PA257_1723 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PA257_1724 PF00893 Small Multidrug Resistance protein PA257_1725 PF00892 EamA-like transporter family PA257_1726 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase PA257_1727 PF01522 Polysaccharide deacetylase PA257_1728 PF01370 NAD dependent epimerase/dehydratase family PA257_1728 PF02911 Formyl transferase, C-terminal domain PA257_1728 PF00551 Formyl transferase PA257_1729 PF00535 Glycosyl transferase family 2 PA257_1730 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PA257_1731 PF00483 Nucleotidyl transferase PA257_1731 PF01050 Mannose-6-phosphate isomerase PA257_1732 PF11182 Alginate O-acetyl transferase AlgF PA257_1733 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX PA257_1734 PF03062 MBOAT, membrane-bound O-acyltransferase family PA257_1736 PF05426 Alginate lyase PA257_1737 PF16824 C-terminal carbohydrate-binding module PA257_1737 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX PA257_1738 PF05048 Periplasmic copper-binding protein (NosD) PA257_1739 PF13372 Alginate export PA257_1741 PF07238 PilZ domain PA257_1743 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PA257_1743 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PA257_1743 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PA257_1744 PF03883 Peroxide stress protein YaaA PA257_1745 PF00005 ABC transporter PA257_1745 PF08402 TOBE domain PA257_1746 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PA257_1746 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PA257_1748 PF12951 Passenger-associated-transport-repeat PA257_1748 PF00082 Subtilase family PA257_1748 PF03797 Autotransporter beta-domain PA257_1749 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PA257_1749 PF01568 Molydopterin dinucleotide binding domain PA257_1749 PF00384 Molybdopterin oxidoreductase PA257_1750 PF00462 Glutaredoxin PA257_1751 PF07690 Major Facilitator Superfamily PA257_1752 PF00210 Ferritin-like domain PA257_1753 PF04324 BFD-like [2Fe-2S] binding domain PA257_1754 PF10417 C-terminal domain of 1-Cys peroxiredoxin PA257_1754 PF00578 AhpC/TSA family PA257_1755 PF00929 Exonuclease PA257_1756 PF01979 Amidohydrolase family PA257_1758 PF00764 Arginosuccinate synthase PA257_1759 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PA257_1760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PA257_1760 PF00529 HlyD membrane-fusion protein of T1SS PA257_1761 PF00873 AcrB/AcrD/AcrF family PA257_1762 PF02321 Outer membrane efflux protein PA257_1768 PF10397 Adenylosuccinate lyase C-terminus PA257_1768 PF00206 Lyase PA257_1769 PF10397 Adenylosuccinate lyase C-terminus PA257_1769 PF00206 Lyase PA257_1772 PF00730 HhH-GPD superfamily base excision DNA repair protein PA257_1772 PF10576 Iron-sulfur binding domain of endonuclease III PA257_1772 PF00633 Helix-hairpin-helix motif PA257_1773 PF02508 Rnf-Nqr subunit, membrane protein PA257_1774 PF04205 FMN-binding domain PA257_1775 PF03116 NQR2, RnfD, RnfE family PA257_1776 PF12838 4Fe-4S dicluster domain PA257_1776 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PA257_1776 PF13375 RnfC Barrel sandwich hybrid domain PA257_1776 PF10531 SLBB domain PA257_1777 PF04060 Putative Fe-S cluster PA257_1778 PF02508 Rnf-Nqr subunit, membrane protein PA257_1781 PF16671 Actin cross-linking domain PA257_1781 PF04717 Type VI secretion system, phage-baseplate injector PA257_1786 PF09334 tRNA synthetases class I (M) PA257_1786 PF01588 Putative tRNA binding domain PA257_1787 PF10609 NUBPL iron-transfer P-loop NTPase PA257_1788 PF00692 dUTPase PA257_1789 PF00561 alpha/beta hydrolase fold PA257_1791 PF00196 Bacterial regulatory proteins, luxR family PA257_1791 PF03472 Autoinducer binding domain PA257_1792 PF00765 Autoinducer synthase PA257_1793 PF00497 Bacterial extracellular solute-binding proteins, family 3 PA257_1794 PF00892 EamA-like transporter family PA257_1796 PF00877 NlpC/P60 family PA257_1798 PF00390 Malic enzyme, N-terminal domain PA257_1798 PF03949 Malic enzyme, NAD binding domain PA257_1800 PF01872 RibD C-terminal domain PA257_1801 PF00924 Mechanosensitive ion channel PA257_1802 PF07690 Major Facilitator Superfamily PA257_1804 PF00270 DEAD/DEAH box helicase PA257_1804 PF00271 Helicase conserved C-terminal domain PA257_1807 PF06794 Uncharacterised protein family (UPF0270) PA257_1808 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_1808 PF00072 Response regulator receiver domain PA257_1808 PF01627 Hpt domain PA257_1808 PF00512 His Kinase A (phospho-acceptor) domain PA257_1808 PF00672 HAMP domain PA257_1808 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PA257_1809 PF05343 M42 glutamyl aminopeptidase PA257_1811 PF00733 Asparagine synthase PA257_1811 PF13537 Glutamine amidotransferase domain PA257_1813 PF01925 Sulfite exporter TauE/SafE PA257_1814 PF01266 FAD dependent oxidoreductase PA257_1814 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PA257_1816 PF03976 Polyphosphate kinase 2 (PPK2) PA257_1817 PF02803 Thiolase, C-terminal domain PA257_1817 PF00108 Thiolase, N-terminal domain PA257_1818 PF04337 Protein of unknown function, DUF480 PA257_1819 PF06039 Malate:quinone oxidoreductase (Mqo) PA257_1821 PF00578 AhpC/TSA family PA257_1821 PF10417 C-terminal domain of 1-Cys peroxiredoxin PA257_1822 PF09084 NMT1/THI5 like PA257_1823 PF00528 Binding-protein-dependent transport system inner membrane component PA257_1824 PF00005 ABC transporter PA257_1825 PF03358 NADPH-dependent FMN reductase PA257_1826 PF09084 NMT1/THI5 like PA257_1827 PF00296 Luciferase-like monooxygenase PA257_1828 PF00528 Binding-protein-dependent transport system inner membrane component PA257_1829 PF00005 ABC transporter PA257_1830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1830 PF03459 TOBE domain PA257_1833 PF02152 Dihydroneopterin aldolase PA257_1834 PF01227 GTP cyclohydrolase I PA257_1837 PF00258 Flavodoxin PA257_1838 PF03466 LysR substrate binding domain PA257_1838 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1839 PF03788 LrgA family PA257_1840 PF04172 LrgB-like family PA257_1841 PF00596 Class II Aldolase and Adducin N-terminal domain PA257_1842 PF12697 Alpha/beta hydrolase family PA257_1844 PF00106 short chain dehydrogenase PA257_1845 PF00378 Enoyl-CoA hydratase/isomerase PA257_1850 PF07044 Protein of unknown function (DUF1329) PA257_1851 PF00196 Bacterial regulatory proteins, luxR family PA257_1852 PF13369 Transglutaminase-like superfamily PA257_1853 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PA257_1853 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PA257_1854 PF00676 Dehydrogenase E1 component PA257_1855 PF02780 Transketolase, C-terminal domain PA257_1855 PF02779 Transketolase, pyrimidine binding domain PA257_1856 PF00364 Biotin-requiring enzyme PA257_1856 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PA257_1856 PF02817 e3 binding domain PA257_1864 PF07715 TonB-dependent Receptor Plug Domain PA257_1864 PF00593 TonB dependent receptor PA257_1865 PF06438 Heme-binding protein A (HasA) PA257_1866 PF00005 ABC transporter PA257_1866 PF00664 ABC transporter transmembrane region PA257_1867 PF00529 HlyD membrane-fusion protein of T1SS PA257_1868 PF02321 Outer membrane efflux protein PA257_1870 PF06146 Phosphate-starvation-inducible E PA257_1875 PF03466 LysR substrate binding domain PA257_1875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1876 PF00970 Oxidoreductase FAD-binding domain PA257_1876 PF00175 Oxidoreductase NAD-binding domain PA257_1877 PF05573 NosL PA257_1878 PF12679 ABC-2 family transporter protein PA257_1879 PF00005 ABC transporter PA257_1880 PF05048 Periplasmic copper-binding protein (NosD) PA257_1881 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PA257_1881 PF18764 Nitrous oxide reductase propeller repeat PA257_1881 PF18793 Nitrous oxide reductase propeller repeat 2 PA257_1882 PF12801 4Fe-4S binding domain PA257_1882 PF04205 FMN-binding domain PA257_1885 PF01980 tRNA-methyltransferase O PA257_1885 PF18389 TrmO C-terminal domain PA257_1889 PF00005 ABC transporter PA257_1891 PF00528 Binding-protein-dependent transport system inner membrane component PA257_1892 PF07702 UTRA domain PA257_1892 PF00392 Bacterial regulatory proteins, gntR family PA257_1893 PF06754 Phosphonate metabolism protein PhnG PA257_1895 PF05861 Bacterial phosphonate metabolism protein (PhnI) PA257_1896 PF06007 Phosphonate metabolism protein PhnJ PA257_1897 PF00005 ABC transporter PA257_1898 PF00005 ABC transporter PA257_1899 PF07969 Amidohydrolase family PA257_1901 PF12706 Beta-lactamase superfamily domain PA257_1908 PF00795 Carbon-nitrogen hydrolase PA257_1909 PF07724 AAA domain (Cdc48 subfamily) PA257_1909 PF10431 C-terminal, D2-small domain, of ClpB protein PA257_1911 PF03861 ANTAR domain PA257_1914 PF00529 HlyD membrane-fusion protein of T1SS PA257_1914 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PA257_1916 PF00892 EamA-like transporter family PA257_1917 PF00291 Pyridoxal-phosphate dependent enzyme PA257_1918 PF00120 Glutamine synthetase, catalytic domain PA257_1919 PF07690 Major Facilitator Superfamily PA257_1922 PF07238 PilZ domain PA257_1922 PF07317 Flagellar regulator YcgR PA257_1926 PF01584 CheW-like domain PA257_1926 PF00072 Response regulator receiver domain PA257_1927 PF03705 CheR methyltransferase, all-alpha domain PA257_1927 PF01739 CheR methyltransferase, SAM binding domain PA257_1928 PF13466 STAS domain PA257_1929 PF00486 Transcriptional regulatory protein, C terminal PA257_1929 PF00072 Response regulator receiver domain PA257_1931 PF00270 DEAD/DEAH box helicase PA257_1931 PF00570 HRDC domain PA257_1931 PF16124 RecQ zinc-binding PA257_1931 PF09382 RQC domain PA257_1931 PF00271 Helicase conserved C-terminal domain PA257_1932 PF01590 GAF domain PA257_1932 PF00990 Diguanylate cyclase, GGDEF domain PA257_1932 PF00360 Phytochrome region PA257_1932 PF00563 EAL domain PA257_1937 PF01734 Patatin-like phospholipase PA257_1939 PF01370 NAD dependent epimerase/dehydratase family PA257_1940 PF07690 Major Facilitator Superfamily PA257_1943 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PA257_1943 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PA257_1944 PF12680 SnoaL-like domain PA257_1945 PF00067 Cytochrome P450 PA257_1946 PF00106 short chain dehydrogenase PA257_1948 PF01494 FAD binding domain PA257_1949 PF00975 Thioesterase domain PA257_1949 PF00668 Condensation domain PA257_1949 PF13193 AMP-binding enzyme C-terminal domain PA257_1949 PF00501 AMP-binding enzyme PA257_1949 PF00550 Phosphopantetheine attachment site PA257_1950 PF00574 Clp protease PA257_1952 PF00561 alpha/beta hydrolase fold PA257_1952 PF00106 short chain dehydrogenase PA257_1955 PF03466 LysR substrate binding domain PA257_1955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_1957 PF05506 Domain of unknown function (DUF756) PA257_1957 PF04185 Phosphoesterase family PA257_1960 PF00528 Binding-protein-dependent transport system inner membrane component PA257_1961 PF00528 Binding-protein-dependent transport system inner membrane component PA257_1962 PF00005 ABC transporter PA257_1964 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PA257_1964 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PA257_1965 PF00990 Diguanylate cyclase, GGDEF domain PA257_1965 PF03707 Bacterial signalling protein N terminal repeat PA257_1965 PF00563 EAL domain PA257_1966 PF08019 Phosphoethanolamine transferase EptA/EptB PA257_1966 PF00884 Sulfatase PA257_1967 PF00582 Universal stress protein family PA257_1969 PF00271 Helicase conserved C-terminal domain PA257_1969 PF00176 SNF2 family N-terminal domain PA257_1969 PF18339 RapA N-terminal Tudor like domain 1 PA257_1969 PF18337 RapA N-terminal Tudor like domain PA257_1969 PF12137 RNA polymerase recycling family C-terminal PA257_1976 PF13533 Biotin-lipoyl like PA257_1977 PF07690 Major Facilitator Superfamily PA257_1978 PF01575 MaoC like domain PA257_1979 PF12146 Serine aminopeptidase, S33 PA257_1981 PF00501 AMP-binding enzyme PA257_1981 PF13193 AMP-binding enzyme C-terminal domain PA257_1982 PF00501 AMP-binding enzyme PA257_1982 PF13193 AMP-binding enzyme C-terminal domain PA257_1984 PF00270 DEAD/DEAH box helicase PA257_1984 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PA257_1984 PF11898 Domain of unknown function (DUF3418) PA257_1984 PF04408 Helicase associated domain (HA2) PA257_1984 PF00271 Helicase conserved C-terminal domain PA257_1985 PF00245 Alkaline phosphatase PA257_1986 PF01230 HIT domain PA257_1988 PF04717 Type VI secretion system, phage-baseplate injector PA257_1988 PF16671 Actin cross-linking domain PA257_1995 PF12796 Ankyrin repeats (3 copies) PA257_1995 PF00023 Ankyrin repeat PA257_1996 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PA257_1996 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PA257_1997 PF04542 Sigma-70 region 2 PA257_1997 PF08281 Sigma-70, region 4 PA257_2001 PF05114 Protein of unknown function (DUF692) PA257_2004 PF07396 Phosphate-selective porin O and P PA257_2006 PF07396 Phosphate-selective porin O and P PA257_2008 PF00561 alpha/beta hydrolase fold PA257_2008 PF00106 short chain dehydrogenase PA257_2010 PF02694 Uncharacterised BCR, YnfA/UPF0060 family PA257_2013 PF08494 DEAD/H associated PA257_2013 PF00270 DEAD/DEAH box helicase PA257_2013 PF00271 Helicase conserved C-terminal domain PA257_2014 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_2014 PF00512 His Kinase A (phospho-acceptor) domain PA257_2016 PF12833 Helix-turn-helix domain PA257_2016 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PA257_2017 PF07715 TonB-dependent Receptor Plug Domain PA257_2017 PF07660 Secretin and TonB N terminus short domain PA257_2017 PF00593 TonB dependent receptor PA257_2018 PF07690 Major Facilitator Superfamily PA257_2019 PF00313 'Cold-shock' DNA-binding domain PA257_2020 PF00893 Small Multidrug Resistance protein PA257_2021 PF01758 Sodium Bile acid symporter family PA257_2022 PF04381 Putative exonuclease, RdgC PA257_2025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PA257_2025 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PA257_2031 PF00563 EAL domain PA257_2031 PF17153 Periplasmic sensor domain, extracellular PA257_2032 PF00595 PDZ domain PA257_2032 PF17804 Tail specific protease N-terminal domain PA257_2032 PF11818 C-terminal domain of tail specific protease (DUF3340) PA257_2032 PF03572 Peptidase family S41 PA257_2033 PF14765 Polyketide synthase dehydratase PA257_2033 PF08659 KR domain PA257_2033 PF00550 Phosphopantetheine attachment site PA257_2033 PF00109 Beta-ketoacyl synthase, N-terminal domain PA257_2033 PF02801 Beta-ketoacyl synthase, C-terminal domain PA257_2033 PF08240 Alcohol dehydrogenase GroES-like domain PA257_2033 PF16197 Ketoacyl-synthetase C-terminal extension PA257_2033 PF00698 Acyl transferase domain PA257_2034 PF18429 Domain of unknown function (DUF5609) PA257_2035 PF00005 ABC transporter PA257_2035 PF08402 TOBE domain PA257_2037 PF00528 Binding-protein-dependent transport system inner membrane component PA257_2040 PF00392 Bacterial regulatory proteins, gntR family PA257_2040 PF07702 UTRA domain PA257_2041 PF13302 Acetyltransferase (GNAT) domain PA257_2042 PF02127 Aminopeptidase I zinc metalloprotease (M18) PA257_2043 PF00849 RNA pseudouridylate synthase PA257_2044 PF03776 Septum formation topological specificity factor MinE PA257_2045 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PA257_2046 PF03775 Septum formation inhibitor MinC, C-terminal domain PA257_2046 PF05209 Septum formation inhibitor MinC, N-terminal domain PA257_2047 PF03279 Bacterial lipid A biosynthesis acyltransferase PA257_2049 PF02678 Pirin PA257_2049 PF05726 Pirin C-terminal cupin domain PA257_2050 PF04333 MlaA lipoprotein PA257_2054 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PA257_2055 PF04341 Protein of unknown function, DUF485 PA257_2056 PF00474 Sodium:solute symporter family PA257_2062 PF00664 ABC transporter transmembrane region PA257_2062 PF00005 ABC transporter PA257_2063 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PA257_2064 PF00561 alpha/beta hydrolase fold PA257_2067 PF02525 Flavodoxin-like fold PA257_2069 PF01597 Glycine cleavage H-protein PA257_2070 PF01370 NAD dependent epimerase/dehydratase family PA257_2071 PF02798 Glutathione S-transferase, N-terminal domain PA257_2071 PF00043 Glutathione S-transferase, C-terminal domain PA257_2072 PF03358 NADPH-dependent FMN reductase PA257_2073 PF03466 LysR substrate binding domain PA257_2073 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2075 PF01588 Putative tRNA binding domain PA257_2076 PF12833 Helix-turn-helix domain PA257_2078 PF00534 Glycosyl transferases group 1 PA257_2078 PF13439 Glycosyltransferase Family 4 PA257_2079 PF00211 Adenylate and Guanylate cyclase catalytic domain PA257_2081 PF12833 Helix-turn-helix domain PA257_2081 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PA257_2084 PF00005 ABC transporter PA257_2085 PF02405 Permease MlaE PA257_2086 PF02386 Cation transport protein PA257_2087 PF03692 Putative zinc- or iron-chelating domain PA257_2088 PF00881 Nitroreductase family PA257_2090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_2090 PF00672 HAMP domain PA257_2090 PF00512 His Kinase A (phospho-acceptor) domain PA257_2090 PF16750 Sensor domain of 2-component histidine kinase PA257_2092 PF00072 Response regulator receiver domain PA257_2092 PF00486 Transcriptional regulatory protein, C terminal PA257_2094 PF03795 YCII-related domain PA257_2095 PF04279 Intracellular septation protein A PA257_2096 PF02811 PHP domain PA257_2097 PF01300 Telomere recombination PA257_2098 PF02616 Segregation and condensation protein ScpA PA257_2099 PF04079 Segregation and condensation complex subunit ScpB PA257_2102 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PA257_2102 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PA257_2104 PF00920 Dehydratase family PA257_2105 PF02685 Glucokinase PA257_2106 PF00072 Response regulator receiver domain PA257_2106 PF00486 Transcriptional regulatory protein, C terminal PA257_2107 PF00512 His Kinase A (phospho-acceptor) domain PA257_2107 PF00672 HAMP domain PA257_2107 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_2108 PF01547 Bacterial extracellular solute-binding protein PA257_2110 PF00528 Binding-protein-dependent transport system inner membrane component PA257_2111 PF00005 ABC transporter PA257_2111 PF17912 MalK OB fold domain PA257_2113 PF04966 Carbohydrate-selective porin, OprB family PA257_2115 PF01263 Aldose 1-epimerase PA257_2116 PF01380 SIS domain PA257_2116 PF01418 Helix-turn-helix domain, rpiR family PA257_2117 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PA257_2117 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PA257_2118 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PA257_2119 PF01081 KDPG and KHG aldolase PA257_2121 PF00849 RNA pseudouridylate synthase PA257_2121 PF01479 S4 domain PA257_2123 PF00990 Diguanylate cyclase, GGDEF domain PA257_2125 PF03616 Sodium/glutamate symporter PA257_2126 PF00491 Arginase family PA257_2128 PF00106 short chain dehydrogenase PA257_2129 PF13419 Haloacid dehalogenase-like hydrolase PA257_2131 PF01979 Amidohydrolase family PA257_2132 PF01008 Initiation factor 2 subunit family PA257_2133 PF00521 DNA gyrase/topoisomerase IV, subunit A PA257_2133 PF03989 DNA gyrase C-terminal domain, beta-propeller PA257_2134 PF00266 Aminotransferase class-V PA257_2135 PF01842 ACT domain PA257_2135 PF01817 Chorismate mutase type II PA257_2135 PF00800 Prephenate dehydratase PA257_2136 PF00155 Aminotransferase class I and II PA257_2137 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PA257_2138 PF02224 Cytidylate kinase PA257_2139 PF00575 S1 RNA binding domain PA257_2140 PF00216 Bacterial DNA-binding protein PA257_2143 PF00535 Glycosyl transferase family 2 PA257_2143 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 PA257_2145 PF08485 Polysaccharide biosynthesis protein C-terminal PA257_2145 PF02719 Polysaccharide biosynthesis protein PA257_2146 PF01370 NAD dependent epimerase/dehydratase family PA257_2147 PF02350 UDP-N-acetylglucosamine 2-epimerase PA257_2148 PF13579 Glycosyl transferase 4-like domain PA257_2149 PF01370 NAD dependent epimerase/dehydratase family PA257_2150 PF02719 Polysaccharide biosynthesis protein PA257_2153 PF00155 Aminotransferase class I and II PA257_2154 PF17757 UvrB interaction domain PA257_2154 PF12344 Ultra-violet resistance protein B PA257_2154 PF02151 UvrB/uvrC motif PA257_2154 PF04851 Type III restriction enzyme, res subunit PA257_2154 PF00271 Helicase conserved C-terminal domain PA257_2155 PF07690 Major Facilitator Superfamily PA257_2156 PF13533 Biotin-lipoyl like PA257_2157 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2157 PF03466 LysR substrate binding domain PA257_2158 PF00749 tRNA synthetases class I (E and Q), catalytic domain PA257_2164 PF00561 alpha/beta hydrolase fold PA257_2165 PF01081 KDPG and KHG aldolase PA257_2167 PF01207 Dihydrouridine synthase (Dus) PA257_2169 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PA257_2170 PF00011 Hsp20/alpha crystallin family PA257_2172 PF03466 LysR substrate binding domain PA257_2172 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2173 PF01042 Endoribonuclease L-PSP PA257_2174 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2175 PF00330 Aconitase family (aconitate hydratase) PA257_2176 PF00694 Aconitase C-terminal domain PA257_2177 PF08241 Methyltransferase domain PA257_2178 PF00180 Isocitrate/isopropylmalate dehydrogenase PA257_2179 PF02774 Semialdehyde dehydrogenase, dimerisation domain PA257_2179 PF01118 Semialdehyde dehydrogenase, NAD binding domain PA257_2180 PF02774 Semialdehyde dehydrogenase, dimerisation domain PA257_2180 PF01118 Semialdehyde dehydrogenase, NAD binding domain PA257_2182 PF01416 tRNA pseudouridine synthase PA257_2183 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PA257_2184 PF01039 Carboxyl transferase domain PA257_2184 PF17848 Acetyl-coA carboxylase zinc finger domain PA257_2185 PF02875 Mur ligase family, glutamate ligase domain PA257_2185 PF08245 Mur ligase middle domain PA257_2186 PF05036 Sporulation related domain PA257_2187 PF02674 Colicin V production protein PA257_2188 PF00156 Phosphoribosyl transferase domain PA257_2189 PF01053 Cys/Met metabolism PLP-dependent enzyme PA257_2191 PF00263 Bacterial type II and III secretion system protein PA257_2191 PF03958 Bacterial type II/III secretion system short domain PA257_2192 PF11356 Type II secretion system protein C PA257_2193 PF00437 Type II/IV secretion system protein PA257_2194 PF00482 Type II secretion system (T2SS), protein F PA257_2195 PF08334 Type II secretion system (T2SS), protein G PA257_2195 PF07963 Prokaryotic N-terminal methylation motif PA257_2196 PF12019 Type II transport protein GspH PA257_2196 PF07963 Prokaryotic N-terminal methylation motif PA257_2197 PF07963 Prokaryotic N-terminal methylation motif PA257_2197 PF02501 Type II secretion system (T2SS), protein I PA257_2198 PF07963 Prokaryotic N-terminal methylation motif PA257_2198 PF11612 Type II secretion system (T2SS), protein J PA257_2199 PF03934 Type II secretion system (T2SS), protein K PA257_2200 PF05134 Type II secretion system (T2SS), protein L PA257_2200 PF12693 GspL periplasmic domain PA257_2201 PF04612 Type II secretion system (T2SS), protein M PA257_2206 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PA257_2206 PF12833 Helix-turn-helix domain PA257_2209 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PA257_2209 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_2213 PF01513 ATP-NAD kinase PA257_2214 PF00149 Calcineurin-like phosphoesterase PA257_2215 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease PA257_2215 PF01694 Rhomboid family PA257_2216 PF07023 Protein of unknown function (DUF1315) PA257_2218 PF11940 Domain of unknown function (DUF3458) Ig-like fold PA257_2218 PF01433 Peptidase family M1 domain PA257_2218 PF17432 Domain of unknown function (DUF3458_C) ARM repeats PA257_2221 PF07044 Protein of unknown function (DUF1329) PA257_2224 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_2224 PF00512 His Kinase A (phospho-acceptor) domain PA257_2225 PF00072 Response regulator receiver domain PA257_2225 PF00486 Transcriptional regulatory protein, C terminal PA257_2231 PF01882 Protein of unknown function DUF58 PA257_2232 PF17863 AAA lid domain PA257_2232 PF07726 ATPase family associated with various cellular activities (AAA) PA257_2234 PF05088 Bacterial NAD-glutamate dehydrogenase PA257_2235 PF03537 Glycoside-hydrolase family GH114 PA257_2240 PF00534 Glycosyl transferases group 1 PA257_2240 PF13439 Glycosyltransferase Family 4 PA257_2246 PF00561 alpha/beta hydrolase fold PA257_2249 PF01180 Dihydroorotate dehydrogenase PA257_2251 PF02926 THUMP domain PA257_2251 PF10672 S-adenosylmethionine-dependent methyltransferase PA257_2251 PF01170 Putative RNA methylase family UPF0020 PA257_2252 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family PA257_2253 PF04320 Protein with unknown function (DUF469) PA257_2254 PF00196 Bacterial regulatory proteins, luxR family PA257_2254 PF00072 Response regulator receiver domain PA257_2255 PF00072 Response regulator receiver domain PA257_2255 PF01627 Hpt domain PA257_2255 PF00497 Bacterial extracellular solute-binding proteins, family 3 PA257_2255 PF00512 His Kinase A (phospho-acceptor) domain PA257_2255 PF00989 PAS fold PA257_2255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_2256 PF01966 HD domain PA257_2261 PF00909 Ammonium Transporter Family PA257_2262 PF03573 outer membrane porin, OprD family PA257_2263 PF00753 Metallo-beta-lactamase superfamily PA257_2263 PF16123 Hydroxyacylglutathione hydrolase C-terminus PA257_2265 PF02798 Glutathione S-transferase, N-terminal domain PA257_2266 PF00440 Bacterial regulatory proteins, tetR family PA257_2271 PF12804 MobA-like NTP transferase domain PA257_2272 PF00994 Probable molybdopterin binding domain PA257_2273 PF03453 MoeA N-terminal region (domain I and II) PA257_2273 PF03454 MoeA C-terminal region (domain IV) PA257_2273 PF00994 Probable molybdopterin binding domain PA257_2277 PF01266 FAD dependent oxidoreductase PA257_2277 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PA257_2278 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PA257_2278 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PA257_2279 PF00781 Diacylglycerol kinase catalytic domain PA257_2282 PF01464 Transglycosylase SLT domain PA257_2282 PF14718 Soluble lytic murein transglycosylase L domain PA257_2286 PF00582 Universal stress protein family PA257_2289 PF00378 Enoyl-CoA hydratase/isomerase PA257_2289 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PA257_2289 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PA257_2290 PF02803 Thiolase, C-terminal domain PA257_2290 PF00108 Thiolase, N-terminal domain PA257_2292 PF01396 Topoisomerase DNA binding C4 zinc finger PA257_2292 PF01751 Toprim domain PA257_2292 PF08272 Topoisomerase I zinc-ribbon-like PA257_2292 PF01131 DNA topoisomerase PA257_2295 PF03846 Cell division inhibitor SulA PA257_2296 PF00717 Peptidase S24-like PA257_2296 PF01726 LexA DNA binding domain PA257_2297 PF00440 Bacterial regulatory proteins, tetR family PA257_2298 PF00933 Glycosyl hydrolase family 3 N terminal domain PA257_2299 PF01048 Phosphorylase superfamily PA257_2301 PF03461 TRCF domain PA257_2301 PF17757 UvrB interaction domain PA257_2301 PF00270 DEAD/DEAH box helicase PA257_2301 PF02559 CarD-like/TRCF domain PA257_2301 PF00271 Helicase conserved C-terminal domain PA257_2302 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PA257_2302 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PA257_2303 PF00324 Amino acid permease PA257_2304 PF11973 NQRA C-terminal domain PA257_2304 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) PA257_2305 PF03116 NQR2, RnfD, RnfE family PA257_2306 PF04205 FMN-binding domain PA257_2307 PF02508 Rnf-Nqr subunit, membrane protein PA257_2308 PF02508 Rnf-Nqr subunit, membrane protein PA257_2309 PF00970 Oxidoreductase FAD-binding domain PA257_2309 PF00175 Oxidoreductase NAD-binding domain PA257_2309 PF00111 2Fe-2S iron-sulfur cluster binding domain PA257_2310 PF02424 ApbE family PA257_2312 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PA257_2312 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_2313 PF03009 Glycerophosphoryl diester phosphodiesterase family PA257_2316 PF12704 MacB-like periplasmic core domain PA257_2316 PF02687 FtsX-like permease family PA257_2317 PF00005 ABC transporter PA257_2318 PF12704 MacB-like periplasmic core domain PA257_2318 PF02687 FtsX-like permease family PA257_2320 PF03772 Competence protein PA257_2320 PF13567 Domain of unknown function (DUF4131) PA257_2320 PF00753 Metallo-beta-lactamase superfamily PA257_2321 PF01618 MotA/TolQ/ExbB proton channel family PA257_2322 PF02472 Biopolymer transport protein ExbD/TolR PA257_2323 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PA257_2324 PF03966 Trm112p-like protein PA257_2325 PF02348 Cytidylyltransferase PA257_2326 PF01451 Low molecular weight phosphotyrosine protein phosphatase PA257_2327 PF01565 FAD binding domain PA257_2327 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PA257_2328 PF10150 Ribonuclease E/G family PA257_2328 PF12111 Polyribonucleotide phosphorylase C terminal PA257_2328 PF00575 S1 RNA binding domain PA257_2330 PF00849 RNA pseudouridylate synthase PA257_2330 PF01479 S4 domain PA257_2331 PF13419 Haloacid dehalogenase-like hydrolase PA257_2332 PF06965 Na+/H+ antiporter 1 PA257_2332 PF01343 Peptidase family S49 PA257_2333 PF02545 Maf-like protein PA257_2334 PF02620 Large ribosomal RNA subunit accumulation protein YceD PA257_2335 PF01783 Ribosomal L32p protein family PA257_2336 PF02504 Fatty acid synthesis protein PA257_2337 PF00698 Acyl transferase domain PA257_2339 PF00550 Phosphopantetheine attachment site PA257_2341 PF00109 Beta-ketoacyl synthase, N-terminal domain PA257_2341 PF02801 Beta-ketoacyl synthase, C-terminal domain PA257_2342 PF01063 Amino-transferase class IV PA257_2343 PF02618 YceG-like family PA257_2344 PF02223 Thymidylate kinase PA257_2345 PF09115 DNA polymerase III, delta subunit, C terminal PA257_2347 PF01026 TatD related DNase PA257_2348 PF00266 Aminotransferase class-V PA257_2349 PF00440 Bacterial regulatory proteins, tetR family PA257_2354 PF01012 Electron transfer flavoprotein domain PA257_2355 PF01012 Electron transfer flavoprotein domain PA257_2355 PF00766 Electron transfer flavoprotein FAD-binding domain PA257_2356 PF12241 Trans-2-enoyl-CoA reductase catalytic region PA257_2356 PF07055 Enoyl reductase FAD binding domain PA257_2356 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase PA257_2357 PF00561 alpha/beta hydrolase fold PA257_2358 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PA257_2359 PF11761 Cobalamin biosynthesis central region PA257_2359 PF11760 Cobalamin synthesis G N-terminal PA257_2359 PF01890 Cobalamin synthesis G C-terminus PA257_2363 PF07683 Cobalamin synthesis protein cobW C-terminal domain PA257_2363 PF02492 CobW/HypB/UreG, nucleotide-binding domain PA257_2364 PF02514 CobN/Magnesium Chelatase PA257_2365 PF00793 DAHP synthetase I family PA257_2367 PF13519 von Willebrand factor type A domain PA257_2367 PF07728 AAA domain (dynein-related subfamily) PA257_2367 PF17863 AAA lid domain PA257_2369 PF00108 Thiolase, N-terminal domain PA257_2369 PF02803 Thiolase, C-terminal domain PA257_2370 PF02225 PA domain PA257_2370 PF04389 Peptidase family M28 PA257_2371 PF00860 Permease family PA257_2375 PF00561 alpha/beta hydrolase fold PA257_2376 PF07690 Major Facilitator Superfamily PA257_2377 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PA257_2378 PF00440 Bacterial regulatory proteins, tetR family PA257_2379 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2379 PF03466 LysR substrate binding domain PA257_2384 PF00005 ABC transporter PA257_2385 PF00528 Binding-protein-dependent transport system inner membrane component PA257_2386 PF00528 Binding-protein-dependent transport system inner membrane component PA257_2387 PF00497 Bacterial extracellular solute-binding proteins, family 3 PA257_2388 PF01546 Peptidase family M20/M25/M40 PA257_2388 PF07687 Peptidase dimerisation domain PA257_2389 PF03466 LysR substrate binding domain PA257_2389 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2390 PF00672 HAMP domain PA257_2390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_2395 PF00753 Metallo-beta-lactamase superfamily PA257_2396 PF01032 FecCD transport family PA257_2398 PF00005 ABC transporter PA257_2399 PF07715 TonB-dependent Receptor Plug Domain PA257_2399 PF00593 TonB dependent receptor PA257_2400 PF02659 Putative manganese efflux pump PA257_2401 PF02571 Precorrin-6x reductase CbiJ/CobK PA257_2402 PF01888 CbiD PA257_2403 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PA257_2404 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PA257_2404 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PA257_2405 PF02570 Precorrin-8X methylmutase PA257_2406 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PA257_2407 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PA257_2410 PF00691 OmpA family PA257_2410 PF05736 OprF membrane domain PA257_2411 PF00072 Response regulator receiver domain PA257_2411 PF00196 Bacterial regulatory proteins, luxR family PA257_2413 PF00155 Aminotransferase class I and II PA257_2413 PF00392 Bacterial regulatory proteins, gntR family PA257_2414 PF04542 Sigma-70 region 2 PA257_2414 PF08281 Sigma-70, region 4 PA257_2417 PF00668 Condensation domain PA257_2417 PF00501 AMP-binding enzyme PA257_2417 PF13193 AMP-binding enzyme C-terminal domain PA257_2417 PF00975 Thioesterase domain PA257_2417 PF00550 Phosphopantetheine attachment site PA257_2419 PF00364 Biotin-requiring enzyme PA257_2419 PF02785 Biotin carboxylase C-terminal domain PA257_2419 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PA257_2419 PF00289 Biotin carboxylase, N-terminal domain PA257_2420 PF00378 Enoyl-CoA hydratase/isomerase PA257_2421 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_2421 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_2421 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_2422 PF01039 Carboxyl transferase domain PA257_2425 PF17932 Tetracyclin repressor-like, C-terminal domain PA257_2425 PF00440 Bacterial regulatory proteins, tetR family PA257_2428 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_2428 PF00512 His Kinase A (phospho-acceptor) domain PA257_2428 PF00072 Response regulator receiver domain PA257_2428 PF13188 PAS domain PA257_2428 PF08448 PAS fold PA257_2429 PF02954 Bacterial regulatory protein, Fis family PA257_2429 PF00072 Response regulator receiver domain PA257_2429 PF00158 Sigma-54 interaction domain PA257_2431 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2431 PF03466 LysR substrate binding domain PA257_2433 PF03466 LysR substrate binding domain PA257_2433 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2434 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PA257_2435 PF07726 ATPase family associated with various cellular activities (AAA) PA257_2435 PF17863 AAA lid domain PA257_2437 PF13559 Domain of unknown function (DUF4129) PA257_2437 PF11992 Domain of unknown function (DUF3488) PA257_2437 PF01841 Transglutaminase-like superfamily PA257_2440 PF07694 5TMR of 5TMR-LYT PA257_2440 PF00990 Diguanylate cyclase, GGDEF domain PA257_2443 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_2443 PF00672 HAMP domain PA257_2443 PF12729 Four helix bundle sensory module for signal transduction PA257_2444 PF01026 TatD related DNase PA257_2446 PF01464 Transglycosylase SLT domain PA257_2446 PF00497 Bacterial extracellular solute-binding proteins, family 3 PA257_2447 PF07681 DoxX PA257_2448 PF03280 Proteobacterial lipase chaperone protein PA257_2449 PF00561 alpha/beta hydrolase fold PA257_2451 PF02834 LigT like Phosphoesterase PA257_2453 PF03449 Transcription elongation factor, N-terminal PA257_2453 PF01272 Transcription elongation factor, GreA/GreB, C-term PA257_2455 PF00005 ABC transporter PA257_2456 PF13472 GDSL-like Lipase/Acylhydrolase family PA257_2458 PF03734 L,D-transpeptidase catalytic domain PA257_2458 PF17969 L,D-transpeptidase C-terminal domain PA257_2459 PF11839 Alanine-zipper, major outer membrane lipoprotein PA257_2462 PF08207 Elongation factor P (EF-P) KOW-like domain PA257_2462 PF01132 Elongation factor P (EF-P) OB domain PA257_2462 PF09285 Elongation factor P, C-terminal PA257_2463 PF02566 OsmC-like protein PA257_2464 PF01047 MarR family PA257_2465 PF03466 LysR substrate binding domain PA257_2465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2467 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2467 PF03466 LysR substrate binding domain PA257_2469 PF06224 Winged helix DNA-binding domain PA257_2470 PF01474 Class-II DAHP synthetase family PA257_2473 PF00378 Enoyl-CoA hydratase/isomerase PA257_2476 PF00271 Helicase conserved C-terminal domain PA257_2476 PF00270 DEAD/DEAH box helicase PA257_2476 PF03880 DbpA RNA binding domain PA257_2478 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PA257_2479 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2479 PF03466 LysR substrate binding domain PA257_2480 PF02321 Outer membrane efflux protein PA257_2481 PF13533 Biotin-lipoyl like PA257_2482 PF07690 Major Facilitator Superfamily PA257_2483 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2483 PF03466 LysR substrate binding domain PA257_2484 PF00582 Universal stress protein family PA257_2485 PF05724 Thiopurine S-methyltransferase (TPMT) PA257_2486 PF18027 Cytosolic carboxypeptidase N-terminal domain PA257_2486 PF00246 Zinc carboxypeptidase PA257_2487 PF01435 Peptidase family M48 PA257_2489 PF00155 Aminotransferase class I and II PA257_2490 PF01641 SelR domain PA257_2491 PF00255 Glutathione peroxidase PA257_2492 PF01047 MarR family PA257_2493 PF00672 HAMP domain PA257_2493 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_2493 PF01627 Hpt domain PA257_2493 PF00072 Response regulator receiver domain PA257_2493 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PA257_2493 PF00512 His Kinase A (phospho-acceptor) domain PA257_2494 PF05496 Holliday junction DNA helicase RuvB P-loop domain PA257_2494 PF05491 RuvB C-terminal winged helix domain PA257_2494 PF17864 RuvB AAA lid domain PA257_2495 PF13185 GAF domain PA257_2496 PF02798 Glutathione S-transferase, N-terminal domain PA257_2496 PF00043 Glutathione S-transferase, C-terminal domain PA257_2500 PF13356 Arm DNA-binding domain PA257_2500 PF00589 Phage integrase family PA257_2501 PF03466 LysR substrate binding domain PA257_2501 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2502 PF01527 Transposase PA257_2503 PF00665 Integrase core domain PA257_2503 PF13276 HTH-like domain PA257_2503 PF13333 Integrase core domain PA257_2506 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system PA257_2513 PF00216 Bacterial DNA-binding protein PA257_2526 PF00174 Oxidoreductase molybdopterin binding domain PA257_2527 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PA257_2527 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_2528 PF01641 SelR domain PA257_2529 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PA257_2531 PF01625 Peptide methionine sulfoxide reductase PA257_2532 PF00174 Oxidoreductase molybdopterin binding domain PA257_2533 PF00175 Oxidoreductase NAD-binding domain PA257_2533 PF00042 Globin PA257_2533 PF00970 Oxidoreductase FAD-binding domain PA257_2534 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PA257_2534 PF00749 tRNA synthetases class I (E and Q), catalytic domain PA257_2537 PF00274 Fructose-bisphosphate aldolase class-I PA257_2539 PF00005 ABC transporter PA257_2542 PF12852 Cupin PA257_2542 PF12833 Helix-turn-helix domain PA257_2543 PF01641 SelR domain PA257_2544 PF01625 Peptide methionine sulfoxide reductase PA257_2546 PF00107 Zinc-binding dehydrogenase PA257_2546 PF08240 Alcohol dehydrogenase GroES-like domain PA257_2548 PF02203 Tar ligand binding domain homologue PA257_2548 PF00672 HAMP domain PA257_2548 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_2549 PF05746 DALR anticodon binding domain PA257_2549 PF00750 tRNA synthetases class I (R) PA257_2549 PF03485 Arginyl tRNA synthetase N terminal domain PA257_2551 PF13683 Integrase core domain PA257_2551 PF13276 HTH-like domain PA257_2552 PF01527 Transposase PA257_2553 PF00512 His Kinase A (phospho-acceptor) domain PA257_2553 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_2555 PF05598 Transposase domain (DUF772) PA257_2555 PF01609 Transposase DDE domain PA257_2557 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PA257_2557 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_2558 PF01695 IstB-like ATP binding protein PA257_2559 PF13700 Domain of unknown function (DUF4158) PA257_2559 PF01526 Tn3 transposase DDE domain PA257_2560 PF02803 Thiolase, C-terminal domain PA257_2560 PF00108 Thiolase, N-terminal domain PA257_2561 PF00111 2Fe-2S iron-sulfur cluster binding domain PA257_2561 PF00175 Oxidoreductase NAD-binding domain PA257_2561 PF00970 Oxidoreductase FAD-binding domain PA257_2562 PF00174 Oxidoreductase molybdopterin binding domain PA257_2564 PF00107 Zinc-binding dehydrogenase PA257_2564 PF08240 Alcohol dehydrogenase GroES-like domain PA257_2574 PF00043 Glutathione S-transferase, C-terminal domain PA257_2574 PF02798 Glutathione S-transferase, N-terminal domain PA257_2575 PF01625 Peptide methionine sulfoxide reductase PA257_2576 PF03466 LysR substrate binding domain PA257_2576 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2582 PF00239 Resolvase, N terminal domain PA257_2582 PF02796 Helix-turn-helix domain of resolvase PA257_2583 PF05052 MerE protein PA257_2584 PF13411 MerR HTH family regulatory protein PA257_2585 PF00403 Heavy-metal-associated domain PA257_2585 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_2585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PA257_2587 PF00403 Heavy-metal-associated domain PA257_2588 PF02411 MerT mercuric transport protein PA257_2589 PF00376 MerR family regulatory protein PA257_2589 PF09278 MerR, DNA binding PA257_2598 PF00239 Resolvase, N terminal domain PA257_2598 PF02796 Helix-turn-helix domain of resolvase PA257_2599 PF01527 Transposase PA257_2603 PF05746 DALR anticodon binding domain PA257_2603 PF00750 tRNA synthetases class I (R) PA257_2603 PF03485 Arginyl tRNA synthetase N terminal domain PA257_2604 PF01609 Transposase DDE domain PA257_2605 PF13340 Putative transposase of IS4/5 family (DUF4096) PA257_2606 PF02525 Flavodoxin-like fold PA257_2633 PF01751 Toprim domain PA257_2633 PF01131 DNA topoisomerase PA257_2635 PF00436 Single-strand binding protein family PA257_2642 PF13614 AAA domain PA257_2659 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_2659 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_2659 PF09317 Domain of unknown function (DUF1974) PA257_2659 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_2661 PF13417 Glutathione S-transferase, N-terminal domain PA257_2661 PF00043 Glutathione S-transferase, C-terminal domain PA257_2662 PF00005 ABC transporter PA257_2663 PF01061 ABC-2 type transporter PA257_2664 PF00512 His Kinase A (phospho-acceptor) domain PA257_2664 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_2664 PF00672 HAMP domain PA257_2665 PF00486 Transcriptional regulatory protein, C terminal PA257_2665 PF00072 Response regulator receiver domain PA257_2668 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term PA257_2668 PF14489 QueF-like protein PA257_2670 PF01966 HD domain PA257_2672 PF00392 Bacterial regulatory proteins, gntR family PA257_2672 PF07702 UTRA domain PA257_2674 PF04333 MlaA lipoprotein PA257_2676 PF00072 Response regulator receiver domain PA257_2678 PF00923 Transaldolase/Fructose-6-phosphate aldolase PA257_2679 PF01207 Dihydrouridine synthase (Dus) PA257_2680 PF00589 Phage integrase family PA257_2685 PF00665 Integrase core domain PA257_2686 PF01527 Transposase PA257_2692 PF00889 Elongation factor TS PA257_2699 PF03592 Terminase small subunit PA257_2699 PF10668 Phage terminase small subunit PA257_2722 PF10548 P22AR C-terminal domain PA257_2722 PF02498 BRO family, N-terminal domain PA257_2726 PF00182 Chitinase class I PA257_2733 PF01527 Transposase PA257_2734 PF00665 Integrase core domain PA257_2742 PF02743 Cache domain PA257_2742 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_2742 PF00672 HAMP domain PA257_2743 PF07687 Peptidase dimerisation domain PA257_2743 PF01546 Peptidase family M20/M25/M40 PA257_2745 PF13443 Cro/C1-type HTH DNA-binding domain PA257_2753 PF01226 Formate/nitrite transporter PA257_2754 PF01266 FAD dependent oxidoreductase PA257_2761 PF00563 EAL domain PA257_2761 PF00990 Diguanylate cyclase, GGDEF domain PA257_2761 PF03707 Bacterial signalling protein N terminal repeat PA257_2763 PF02567 Phenazine biosynthesis-like protein PA257_2764 PF00293 NUDIX domain PA257_2766 PF00378 Enoyl-CoA hydratase/isomerase PA257_2766 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PA257_2766 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PA257_2768 PF04261 Dyp-type peroxidase family PA257_2775 PF03573 outer membrane porin, OprD family PA257_2777 PF03466 LysR substrate binding domain PA257_2777 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2780 PF03974 Ecotin PA257_2785 PF09335 SNARE associated Golgi protein PA257_2787 PF03631 Virulence factor BrkB PA257_2791 PF04231 Endonuclease I PA257_2793 PF00557 Metallopeptidase family M24 PA257_2798 PF00561 alpha/beta hydrolase fold PA257_2800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PA257_2800 PF02824 TGS domain PA257_2800 PF03129 Anticodon binding domain PA257_2800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PA257_2801 PF00707 Translation initiation factor IF-3, C-terminal domain PA257_2801 PF05198 Translation initiation factor IF-3, N-terminal domain PA257_2802 PF01632 Ribosomal protein L35 PA257_2803 PF00453 Ribosomal protein L20 PA257_2804 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PA257_2804 PF01409 tRNA synthetases class II core domain (F) PA257_2805 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PA257_2805 PF03483 B3/4 domain PA257_2805 PF03484 tRNA synthetase B5 domain PA257_2805 PF03147 Ferredoxin-fold anticodon binding domain PA257_2805 PF01588 Putative tRNA binding domain PA257_2806 PF00216 Bacterial DNA-binding protein PA257_2809 PF00176 SNF2 family N-terminal domain PA257_2809 PF00271 Helicase conserved C-terminal domain PA257_2811 PF01555 DNA methylase PA257_2813 PF13683 Integrase core domain PA257_2813 PF13276 HTH-like domain PA257_2814 PF01527 Transposase PA257_2818 PF13087 AAA domain PA257_2818 PF13195 Protein of unknown function (DUF4011) PA257_2818 PF13086 AAA domain PA257_2818 PF13195 Protein of unknown function (DUF4011) PA257_2818 PF13086 AAA domain PA257_2818 PF13087 AAA domain PA257_2820 PF10431 C-terminal, D2-small domain, of ClpB protein PA257_2820 PF02861 Clp amino terminal domain, pathogenicity island component PA257_2820 PF17871 AAA lid domain PA257_2820 PF07724 AAA domain (Cdc48 subfamily) PA257_2820 PF00004 ATPase family associated with various cellular activities (AAA) PA257_2829 PF13411 MerR HTH family regulatory protein PA257_2830 PF00561 alpha/beta hydrolase fold PA257_2831 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PA257_2831 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_2832 PF11953 Domain of unknown function (DUF3470) PA257_2832 PF00037 4Fe-4S binding domain PA257_2833 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PA257_2833 PF01568 Molydopterin dinucleotide binding domain PA257_2833 PF00384 Molybdopterin oxidoreductase PA257_2834 PF01638 HxlR-like helix-turn-helix PA257_2837 PF13416 Bacterial extracellular solute-binding protein PA257_2838 PF01810 LysE type translocator PA257_2839 PF00291 Pyridoxal-phosphate dependent enzyme PA257_2841 PF10431 C-terminal, D2-small domain, of ClpB protein PA257_2841 PF00004 ATPase family associated with various cellular activities (AAA) PA257_2841 PF07724 AAA domain (Cdc48 subfamily) PA257_2841 PF02861 Clp amino terminal domain, pathogenicity island component PA257_2841 PF17871 AAA lid domain PA257_2844 PF12833 Helix-turn-helix domain PA257_2844 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PA257_2849 PF03573 outer membrane porin, OprD family PA257_2850 PF07969 Amidohydrolase family PA257_2854 PF12833 Helix-turn-helix domain PA257_2855 PF07759 Protein of unknown function (DUF1615) PA257_2857 PF03061 Thioesterase superfamily PA257_2858 PF02082 Transcriptional regulator PA257_2860 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_2861 PF00756 Putative esterase PA257_2862 PF00593 TonB dependent receptor PA257_2862 PF07715 TonB-dependent Receptor Plug Domain PA257_2863 PF16750 Sensor domain of 2-component histidine kinase PA257_2863 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_2863 PF00512 His Kinase A (phospho-acceptor) domain PA257_2863 PF00672 HAMP domain PA257_2864 PF00072 Response regulator receiver domain PA257_2864 PF00486 Transcriptional regulatory protein, C terminal PA257_2866 PF04717 Type VI secretion system, phage-baseplate injector PA257_2867 PF05593 RHS Repeat PA257_2867 PF14220 Domain of unknown function (DUF4329) PA257_2867 PF03527 RHS protein PA257_2869 PF00291 Pyridoxal-phosphate dependent enzyme PA257_2870 PF01738 Dienelactone hydrolase family PA257_2871 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2871 PF03466 LysR substrate binding domain PA257_2872 PF08240 Alcohol dehydrogenase GroES-like domain PA257_2872 PF00107 Zinc-binding dehydrogenase PA257_2874 PF01061 ABC-2 type transporter PA257_2875 PF00437 Type II/IV secretion system protein PA257_2875 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PA257_2876 PF00482 Type II secretion system (T2SS), protein F PA257_2877 PF07963 Prokaryotic N-terminal methylation motif PA257_2877 PF08334 Type II secretion system (T2SS), protein G PA257_2886 PF01242 6-pyruvoyl tetrahydropterin synthase PA257_2887 PF02954 Bacterial regulatory protein, Fis family PA257_2887 PF00158 Sigma-54 interaction domain PA257_2888 PF00970 Oxidoreductase FAD-binding domain PA257_2888 PF00042 Globin PA257_2888 PF00175 Oxidoreductase NAD-binding domain PA257_2891 PF17263 Family of unknown function (DUF5329) PA257_2896 PF00486 Transcriptional regulatory protein, C terminal PA257_2896 PF00072 Response regulator receiver domain PA257_2897 PF08918 PhoQ Sensor PA257_2897 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_2899 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_2899 PF00672 HAMP domain PA257_2901 PF13726 Na+-H+ antiporter family PA257_2901 PF03553 Na+/H+ antiporter family PA257_2902 PF00672 HAMP domain PA257_2902 PF17200 Single Cache domain 2 PA257_2902 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_2903 PF01594 AI-2E family transporter PA257_2904 PF08241 Methyltransferase domain PA257_2905 PF00361 Proton-conducting membrane transporter PA257_2906 PF00361 Proton-conducting membrane transporter PA257_2907 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PA257_2907 PF00361 Proton-conducting membrane transporter PA257_2908 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PA257_2909 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PA257_2910 PF12838 4Fe-4S dicluster domain PA257_2911 PF00146 NADH dehydrogenase PA257_2912 PF00384 Molybdopterin oxidoreductase PA257_2912 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PA257_2912 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PA257_2914 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PA257_2914 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PA257_2916 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PA257_2916 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PA257_2917 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PA257_2918 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PA257_2921 PF00463 Isocitrate lyase family PA257_2924 PF13673 Acetyltransferase (GNAT) domain PA257_2925 PF08007 Cupin superfamily protein PA257_2926 PF08328 Adenylosuccinate lyase C-terminal PA257_2926 PF00206 Lyase PA257_2928 PF04356 Protein of unknown function (DUF489) PA257_2930 PF00293 NUDIX domain PA257_2931 PF03971 Monomeric isocitrate dehydrogenase PA257_2932 PF00180 Isocitrate/isopropylmalate dehydrogenase PA257_2933 PF00313 'Cold-shock' DNA-binding domain PA257_2934 PF02617 ATP-dependent Clp protease adaptor protein ClpS PA257_2935 PF10431 C-terminal, D2-small domain, of ClpB protein PA257_2935 PF02861 Clp amino terminal domain, pathogenicity island component PA257_2935 PF07724 AAA domain (Cdc48 subfamily) PA257_2935 PF00004 ATPase family associated with various cellular activities (AAA) PA257_2935 PF17871 AAA lid domain PA257_2936 PF01176 Translation initiation factor 1A / IF-1 PA257_2937 PF04377 Arginine-tRNA-protein transferase, C terminus PA257_2937 PF04376 Arginine-tRNA-protein transferase, N terminus PA257_2938 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PA257_2939 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_2941 PF01580 FtsK/SpoIIIE family PA257_2941 PF09397 Ftsk gamma domain PA257_2941 PF17854 FtsK alpha domain PA257_2941 PF13491 4TM region of DNA translocase FtsK/SpoIIIE PA257_2942 PF03548 Outer membrane lipoprotein carrier protein LolA PA257_2943 PF12002 MgsA AAA+ ATPase C terminal PA257_2943 PF16193 AAA C-terminal domain PA257_2943 PF00004 ATPase family associated with various cellular activities (AAA) PA257_2944 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PA257_2944 PF02403 Seryl-tRNA synthetase N-terminal domain PA257_2945 PF10414 Sirohaem synthase dimerisation region PA257_2945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PA257_2945 PF14824 Sirohaem biosynthesis protein central PA257_2946 PF13409 Glutathione S-transferase, N-terminal domain PA257_2947 PF00591 Glycosyl transferase family, a/b domain PA257_2947 PF02885 Glycosyl transferase family, helical bundle domain PA257_2948 PF04358 DsrC like protein PA257_2949 PF04077 DsrH like protein PA257_2950 PF02635 DsrE/DsrF-like family PA257_2951 PF02635 DsrE/DsrF-like family PA257_2952 PF01027 Inhibitor of apoptosis-promoting Bax1 PA257_2955 PF05995 Cysteine dioxygenase type I PA257_2956 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_2956 PF03466 LysR substrate binding domain PA257_2957 PF00296 Luciferase-like monooxygenase PA257_2958 PF09084 NMT1/THI5 like PA257_2959 PF00296 Luciferase-like monooxygenase PA257_2960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_2960 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_2960 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PA257_2961 PF09084 NMT1/THI5 like PA257_2963 PF09084 NMT1/THI5 like PA257_2965 PF13416 Bacterial extracellular solute-binding protein PA257_2967 PF00196 Bacterial regulatory proteins, luxR family PA257_2967 PF00072 Response regulator receiver domain PA257_2968 PF07715 TonB-dependent Receptor Plug Domain PA257_2968 PF00593 TonB dependent receptor PA257_2970 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PA257_2970 PF12833 Helix-turn-helix domain PA257_2971 PF01494 FAD binding domain PA257_2973 PF00196 Bacterial regulatory proteins, luxR family PA257_2973 PF00072 Response regulator receiver domain PA257_2974 PF08459 UvrC Helix-hairpin-helix N-terminal PA257_2974 PF01541 GIY-YIG catalytic domain PA257_2974 PF02151 UvrB/uvrC motif PA257_2975 PF01066 CDP-alcohol phosphatidyltransferase PA257_2979 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_2979 PF00512 His Kinase A (phospho-acceptor) domain PA257_2979 PF01627 Hpt domain PA257_2979 PF00989 PAS fold PA257_2979 PF00072 Response regulator receiver domain PA257_2979 PF00497 Bacterial extracellular solute-binding proteins, family 3 PA257_2983 PF02525 Flavodoxin-like fold PA257_2984 PF03301 Tryptophan 2,3-dioxygenase PA257_2985 PF00583 Acetyltransferase (GNAT) family PA257_2986 PF01037 Lrp/AsnC ligand binding domain PA257_2989 PF00487 Fatty acid desaturase PA257_2990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_2990 PF00672 HAMP domain PA257_2990 PF12729 Four helix bundle sensory module for signal transduction PA257_2991 PF00072 Response regulator receiver domain PA257_2991 PF00158 Sigma-54 interaction domain PA257_2991 PF02954 Bacterial regulatory protein, Fis family PA257_2992 PF00512 His Kinase A (phospho-acceptor) domain PA257_2992 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_2995 PF07828 PA-IL-like protein PA257_2998 PF00563 EAL domain PA257_2998 PF00360 Phytochrome region PA257_2998 PF00990 Diguanylate cyclase, GGDEF domain PA257_2998 PF01590 GAF domain PA257_3002 PF13649 Methyltransferase domain PA257_3003 PF01740 STAS domain PA257_3003 PF00916 Sulfate permease family PA257_3005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_3005 PF00672 HAMP domain PA257_3010 PF02308 MgtC family PA257_3011 PF13193 AMP-binding enzyme C-terminal domain PA257_3011 PF00501 AMP-binding enzyme PA257_3012 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PA257_3012 PF12833 Helix-turn-helix domain PA257_3013 PF13193 AMP-binding enzyme C-terminal domain PA257_3013 PF00501 AMP-binding enzyme PA257_3014 PF00106 short chain dehydrogenase PA257_3015 PF00108 Thiolase, N-terminal domain PA257_3015 PF02803 Thiolase, C-terminal domain PA257_3016 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_3016 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_3016 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_3017 PF03466 LysR substrate binding domain PA257_3017 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3018 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_3018 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_3018 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_3020 PF03741 Integral membrane protein TerC family PA257_3022 PF03466 LysR substrate binding domain PA257_3022 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3023 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PA257_3024 PF03372 Endonuclease/Exonuclease/phosphatase family PA257_3026 PF01103 Surface antigen PA257_3026 PF07244 Surface antigen variable number repeat PA257_3026 PF17243 POTRA domain TamA domain 1 PA257_3027 PF04357 TamB, inner membrane protein subunit of TAM complex PA257_3028 PF01066 CDP-alcohol phosphatidyltransferase PA257_3029 PF12146 Serine aminopeptidase, S33 PA257_3029 PF12147 Putative methyltransferase PA257_3030 PF00782 Dual specificity phosphatase, catalytic domain PA257_3034 PF00248 Aldo/keto reductase family PA257_3035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3035 PF03466 LysR substrate binding domain PA257_3036 PF01235 Sodium:alanine symporter family PA257_3037 PF08534 Redoxin PA257_3038 PF00155 Aminotransferase class I and II PA257_3042 PF13533 Biotin-lipoyl like PA257_3043 PF00873 AcrB/AcrD/AcrF family PA257_3044 PF00873 AcrB/AcrD/AcrF family PA257_3045 PF02321 Outer membrane efflux protein PA257_3047 PF00672 HAMP domain PA257_3047 PF00512 His Kinase A (phospho-acceptor) domain PA257_3047 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_3048 PF00072 Response regulator receiver domain PA257_3048 PF00486 Transcriptional regulatory protein, C terminal PA257_3049 PF02321 Outer membrane efflux protein PA257_3050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PA257_3050 PF00529 HlyD membrane-fusion protein of T1SS PA257_3051 PF00873 AcrB/AcrD/AcrF family PA257_3052 PF12833 Helix-turn-helix domain PA257_3052 PF14525 AraC-binding-like domain PA257_3053 PF00355 Rieske [2Fe-2S] domain PA257_3053 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PA257_3054 PF00866 Ring hydroxylating beta subunit PA257_3055 PF00111 2Fe-2S iron-sulfur cluster binding domain PA257_3055 PF00175 Oxidoreductase NAD-binding domain PA257_3055 PF00970 Oxidoreductase FAD-binding domain PA257_3056 PF00106 short chain dehydrogenase PA257_3057 PF00970 Oxidoreductase FAD-binding domain PA257_3057 PF00111 2Fe-2S iron-sulfur cluster binding domain PA257_3057 PF00175 Oxidoreductase NAD-binding domain PA257_3058 PF00866 Ring hydroxylating beta subunit PA257_3059 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PA257_3059 PF00355 Rieske [2Fe-2S] domain PA257_3061 PF12833 Helix-turn-helix domain PA257_3061 PF14525 AraC-binding-like domain PA257_3062 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3062 PF03466 LysR substrate binding domain PA257_3064 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PA257_3064 PF13378 Enolase C-terminal domain-like PA257_3065 PF02426 Muconolactone delta-isomerase PA257_3066 PF04444 Catechol dioxygenase N terminus PA257_3066 PF00775 Dioxygenase PA257_3068 PF03573 outer membrane porin, OprD family PA257_3073 PF07690 Major Facilitator Superfamily PA257_3074 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PA257_3076 PF03466 LysR substrate binding domain PA257_3076 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3077 PF05163 DinB family PA257_3078 PF02321 Outer membrane efflux protein PA257_3079 PF00873 AcrB/AcrD/AcrF family PA257_3080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PA257_3081 PF03466 LysR substrate binding domain PA257_3081 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3082 PF00698 Acyl transferase domain PA257_3082 PF08240 Alcohol dehydrogenase GroES-like domain PA257_3082 PF00107 Zinc-binding dehydrogenase PA257_3082 PF14765 Polyketide synthase dehydratase PA257_3082 PF00109 Beta-ketoacyl synthase, N-terminal domain PA257_3082 PF02801 Beta-ketoacyl synthase, C-terminal domain PA257_3082 PF08659 KR domain PA257_3082 PF00550 Phosphopantetheine attachment site PA257_3082 PF16197 Ketoacyl-synthetase C-terminal extension PA257_3084 PF12833 Helix-turn-helix domain PA257_3090 PF00296 Luciferase-like monooxygenase PA257_3091 PF00034 Cytochrome c PA257_3092 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PA257_3094 PF00512 His Kinase A (phospho-acceptor) domain PA257_3094 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_3094 PF08521 Two-component sensor kinase N-terminal PA257_3095 PF00072 Response regulator receiver domain PA257_3095 PF00486 Transcriptional regulatory protein, C terminal PA257_3096 PF02683 Cytochrome C biogenesis protein transmembrane region PA257_3096 PF11412 Disulphide bond corrector protein DsbC PA257_3097 PF00578 AhpC/TSA family PA257_3098 PF13098 Thioredoxin-like domain PA257_3099 PF00067 Cytochrome P450 PA257_3101 PF14497 Glutathione S-transferase, C-terminal domain PA257_3101 PF02798 Glutathione S-transferase, N-terminal domain PA257_3102 PF07690 Major Facilitator Superfamily PA257_3103 PF01557 Fumarylacetoacetate (FAA) hydrolase family PA257_3104 PF07883 Cupin domain PA257_3105 PF03466 LysR substrate binding domain PA257_3105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3106 PF04542 Sigma-70 region 2 PA257_3106 PF08281 Sigma-70, region 4 PA257_3107 PF04773 FecR protein PA257_3107 PF16220 Domain of unknown function (DUF4880) PA257_3109 PF00593 TonB dependent receptor PA257_3109 PF07715 TonB-dependent Receptor Plug Domain PA257_3112 PF17287 POTRA domain PA257_3112 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB PA257_3112 PF08479 POTRA domain, ShlB-type PA257_3113 PF05860 haemagglutination activity domain PA257_3113 PF05594 Haemagluttinin repeat PA257_3113 PF05594 Haemagluttinin repeat PA257_3113 PF13332 Hemagglutinin repeat PA257_3113 PF04829 Pre-toxin domain with VENN motif PA257_3113 PF04829 Pre-toxin domain with VENN motif PA257_3113 PF05860 haemagglutination activity domain PA257_3113 PF13332 Hemagglutinin repeat PA257_3114 PF00665 Integrase core domain PA257_3115 PF01527 Transposase PA257_3122 PF00756 Putative esterase PA257_3122 PF11806 Domain of unknown function (DUF3327) PA257_3141 PF10124 Mu-like prophage major head subunit gpT PA257_3148 PF05069 Phage virion morphogenesis family PA257_3149 PF04233 Phage Mu protein F like protein PA257_3150 PF06074 Protein of unknown function (DUF935) PA257_3168 PF07352 Bacteriophage Mu Gam like protein PA257_3180 PF18024 Helix-turn-helix domain PA257_3180 PF00158 Sigma-54 interaction domain PA257_3181 PF07969 Amidohydrolase family PA257_3182 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3182 PF03466 LysR substrate binding domain PA257_3183 PF01597 Glycine cleavage H-protein PA257_3184 PF02347 Glycine cleavage system P-protein PA257_3185 PF00464 Serine hydroxymethyltransferase PA257_3186 PF03315 Serine dehydratase beta chain PA257_3186 PF03313 Serine dehydratase alpha chain PA257_3187 PF08669 Glycine cleavage T-protein C-terminal barrel domain PA257_3187 PF01571 Aminomethyltransferase folate-binding domain PA257_3194 PF00403 Heavy-metal-associated domain PA257_3197 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3197 PF03466 LysR substrate binding domain PA257_3199 PF04632 Fusaric acid resistance protein family PA257_3201 PF13533 Biotin-lipoyl like PA257_3203 PF03976 Polyphosphate kinase 2 (PPK2) PA257_3206 PF00975 Thioesterase domain PA257_3207 PF00550 Phosphopantetheine attachment site PA257_3207 PF00501 AMP-binding enzyme PA257_3207 PF13193 AMP-binding enzyme C-terminal domain PA257_3207 PF00668 Condensation domain PA257_3211 PF09618 CRISPR-associated protein (Cas_Csy4) PA257_3212 PF09615 CRISPR-associated protein (Cas_Csy3) PA257_3213 PF09614 CRISPR-associated protein (Cas_Csy2) PA257_3214 PF09611 CRISPR-associated protein (Cas_Csy1) PA257_3215 PF18019 HD domain PA257_3216 PF01867 CRISPR associated protein Cas1 PA257_3220 PF03573 outer membrane porin, OprD family PA257_3221 PF00857 Isochorismatase family PA257_3222 PF05726 Pirin C-terminal cupin domain PA257_3222 PF02678 Pirin PA257_3223 PF03466 LysR substrate binding domain PA257_3223 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3224 PF01204 Trehalase PA257_3226 PF07995 Glucose / Sorbosone dehydrogenase PA257_3227 PF00202 Aminotransferase class-III PA257_3228 PF03621 MbtH-like protein PA257_3229 PF00975 Thioesterase domain PA257_3231 PF00950 ABC 3 transport family PA257_3232 PF00005 ABC transporter PA257_3238 PF00501 AMP-binding enzyme PA257_3238 PF13193 AMP-binding enzyme C-terminal domain PA257_3238 PF00668 Condensation domain PA257_3238 PF00550 Phosphopantetheine attachment site PA257_3239 PF00501 AMP-binding enzyme PA257_3239 PF00668 Condensation domain PA257_3239 PF13193 AMP-binding enzyme C-terminal domain PA257_3239 PF00501 AMP-binding enzyme PA257_3239 PF00550 Phosphopantetheine attachment site PA257_3239 PF13193 AMP-binding enzyme C-terminal domain PA257_3239 PF00550 Phosphopantetheine attachment site PA257_3239 PF00668 Condensation domain PA257_3240 PF07859 alpha/beta hydrolase fold PA257_3241 PF00593 TonB dependent receptor PA257_3241 PF07715 TonB-dependent Receptor Plug Domain PA257_3242 PF00664 ABC transporter transmembrane region PA257_3242 PF00005 ABC transporter PA257_3244 PF00551 Formyl transferase PA257_3249 PF02321 Outer membrane efflux protein PA257_3250 PF12704 MacB-like periplasmic core domain PA257_3250 PF02687 FtsX-like permease family PA257_3250 PF00005 ABC transporter PA257_3251 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PA257_3254 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) PA257_3255 PF01804 Penicillin amidase PA257_3256 PF01475 Ferric uptake regulator family PA257_3257 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3257 PF03466 LysR substrate binding domain PA257_3258 PF01070 FMN-dependent dehydrogenase PA257_3261 PF00111 2Fe-2S iron-sulfur cluster binding domain PA257_3261 PF01799 [2Fe-2S] binding domain PA257_3262 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PA257_3265 PF00072 Response regulator receiver domain PA257_3265 PF00196 Bacterial regulatory proteins, luxR family PA257_3268 PF04717 Type VI secretion system, phage-baseplate injector PA257_3271 PF00004 ATPase family associated with various cellular activities (AAA) PA257_3271 PF07724 AAA domain (Cdc48 subfamily) PA257_3271 PF17871 AAA lid domain PA257_3271 PF10431 C-terminal, D2-small domain, of ClpB protein PA257_3284 PF00158 Sigma-54 interaction domain PA257_3287 PF03358 NADPH-dependent FMN reductase PA257_3288 PF00296 Luciferase-like monooxygenase PA257_3289 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_3289 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PA257_3290 PF00158 Sigma-54 interaction domain PA257_3291 PF03969 AFG1-like ATPase PA257_3292 PF03009 Glycerophosphoryl diester phosphodiesterase family PA257_3293 PF00528 Binding-protein-dependent transport system inner membrane component PA257_3294 PF00005 ABC transporter PA257_3294 PF09383 NIL domain PA257_3295 PF03180 NLPA lipoprotein PA257_3296 PF00296 Luciferase-like monooxygenase PA257_3297 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PA257_3297 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_3298 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PA257_3298 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_3298 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_3301 PF00294 pfkB family carbohydrate kinase PA257_3302 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PA257_3302 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PA257_3303 PF01232 Mannitol dehydrogenase Rossmann domain PA257_3303 PF08125 Mannitol dehydrogenase C-terminal domain PA257_3304 PF00005 ABC transporter PA257_3304 PF08402 TOBE domain PA257_3305 PF00528 Binding-protein-dependent transport system inner membrane component PA257_3306 PF00528 Binding-protein-dependent transport system inner membrane component PA257_3309 PF02311 AraC-like ligand binding domain PA257_3309 PF12833 Helix-turn-helix domain PA257_3312 PF00005 ABC transporter PA257_3314 PF00528 Binding-protein-dependent transport system inner membrane component PA257_3315 PF00296 Luciferase-like monooxygenase PA257_3316 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_3316 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PA257_3318 PF00171 Aldehyde dehydrogenase family PA257_3320 PF02447 GntP family permease PA257_3322 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PA257_3322 PF00356 Bacterial regulatory proteins, lacI family PA257_3324 PF01266 FAD dependent oxidoreductase PA257_3325 PF03466 LysR substrate binding domain PA257_3325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3327 PF00144 Beta-lactamase PA257_3331 PF07883 Cupin domain PA257_3331 PF01381 Helix-turn-helix PA257_3334 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PA257_3336 PF00005 ABC transporter PA257_3337 PF00528 Binding-protein-dependent transport system inner membrane component PA257_3338 PF01810 LysE type translocator PA257_3339 PF13193 AMP-binding enzyme C-terminal domain PA257_3339 PF00501 AMP-binding enzyme PA257_3339 PF00668 Condensation domain PA257_3339 PF00550 Phosphopantetheine attachment site PA257_3342 PF13193 AMP-binding enzyme C-terminal domain PA257_3342 PF00550 Phosphopantetheine attachment site PA257_3342 PF00668 Condensation domain PA257_3342 PF13193 AMP-binding enzyme C-terminal domain PA257_3342 PF00501 AMP-binding enzyme PA257_3342 PF00501 AMP-binding enzyme PA257_3342 PF00550 Phosphopantetheine attachment site PA257_3342 PF00668 Condensation domain PA257_3344 PF00704 Glycosyl hydrolases family 18 PA257_3346 PF02910 Fumarate reductase flavoprotein C-term PA257_3346 PF00890 FAD binding domain PA257_3352 PF04966 Carbohydrate-selective porin, OprB family PA257_3353 PF01011 PQQ enzyme repeat PA257_3355 PF07715 TonB-dependent Receptor Plug Domain PA257_3355 PF00593 TonB dependent receptor PA257_3358 PF01435 Peptidase family M48 PA257_3364 PF03358 NADPH-dependent FMN reductase PA257_3365 PF01451 Low molecular weight phosphotyrosine protein phosphatase PA257_3366 PF02040 Arsenical pump membrane protein PA257_3367 PF01022 Bacterial regulatory protein, arsR family PA257_3368 PF12833 Helix-turn-helix domain PA257_3368 PF06719 AraC-type transcriptional regulator N-terminus PA257_3369 PF08240 Alcohol dehydrogenase GroES-like domain PA257_3369 PF00107 Zinc-binding dehydrogenase PA257_3371 PF00376 MerR family regulatory protein PA257_3371 PF09278 MerR, DNA binding PA257_3372 PF03717 Penicillin-binding Protein dimerisation domain PA257_3372 PF00905 Penicillin binding protein transpeptidase domain PA257_3373 PF00583 Acetyltransferase (GNAT) family PA257_3374 PF00440 Bacterial regulatory proteins, tetR family PA257_3376 PF00117 Glutamine amidotransferase class-I PA257_3376 PF06418 CTP synthase N-terminus PA257_3378 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PA257_3378 PF00034 Cytochrome c PA257_3379 PF05199 GMC oxidoreductase PA257_3379 PF00732 GMC oxidoreductase PA257_3380 PF13618 Gluconate 2-dehydrogenase subunit 3 PA257_3381 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PA257_3381 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PA257_3383 PF00294 pfkB family carbohydrate kinase PA257_3385 PF00356 Bacterial regulatory proteins, lacI family PA257_3387 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3387 PF03466 LysR substrate binding domain PA257_3389 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal PA257_3389 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal PA257_3393 PF00710 Asparaginase, N-terminal PA257_3393 PF17763 Glutaminase/Asparaginase C-terminal domain PA257_3394 PF01235 Sodium:alanine symporter family PA257_3397 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PA257_3397 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_3398 PF00364 Biotin-requiring enzyme PA257_3398 PF02817 e3 binding domain PA257_3398 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PA257_3399 PF02779 Transketolase, pyrimidine binding domain PA257_3399 PF02780 Transketolase, C-terminal domain PA257_3400 PF00676 Dehydrogenase E1 component PA257_3400 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal PA257_3401 PF01037 Lrp/AsnC ligand binding domain PA257_3406 PF03023 Lipid II flippase MurJ PA257_3413 PF18412 Outer-membrane lipoprotein Wza C-terminal domain PA257_3413 PF10531 SLBB domain PA257_3413 PF02563 Polysaccharide biosynthesis/export protein PA257_3414 PF00535 Glycosyl transferase family 2 PA257_3415 PF00483 Nucleotidyl transferase PA257_3415 PF01050 Mannose-6-phosphate isomerase PA257_3416 PF02397 Bacterial sugar transferase PA257_3419 PF03475 3-alpha domain PA257_3419 PF03473 MOSC domain PA257_3421 PF12833 Helix-turn-helix domain PA257_3421 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PA257_3471 PF16653 Saccharopine dehydrogenase C-terminal domain PA257_3471 PF03435 Saccharopine dehydrogenase NADP binding domain PA257_3474 PF13700 Domain of unknown function (DUF4158) PA257_3474 PF01526 Tn3 transposase DDE domain PA257_3475 PF00665 Integrase core domain PA257_3476 PF01527 Transposase PA257_3480 PF13683 Integrase core domain PA257_3480 PF13276 HTH-like domain PA257_3481 PF01527 Transposase PA257_3483 PF17853 GGDEF-like domain PA257_3483 PF07905 Purine catabolism regulatory protein-like family PA257_3483 PF13556 PucR C-terminal helix-turn-helix domain PA257_3484 PF05721 Phytanoyl-CoA dioxygenase (PhyH) PA257_3485 PF14870 Photosynthesis system II assembly factor YCF48 PA257_3486 PF03176 MMPL family PA257_3490 PF01266 FAD dependent oxidoreductase PA257_3491 PF05721 Phytanoyl-CoA dioxygenase (PhyH) PA257_3493 PF00743 Flavin-binding monooxygenase-like PA257_3495 PF00465 Iron-containing alcohol dehydrogenase PA257_3496 PF00324 Amino acid permease PA257_3497 PF00171 Aldehyde dehydrogenase family PA257_3498 PF00202 Aminotransferase class-III PA257_3501 PF00474 Sodium:solute symporter family PA257_3502 PF04341 Protein of unknown function, DUF485 PA257_3503 PF00501 AMP-binding enzyme PA257_3503 PF13193 AMP-binding enzyme C-terminal domain PA257_3505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_3505 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_3505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_3508 PF00158 Sigma-54 interaction domain PA257_3508 PF02954 Bacterial regulatory protein, Fis family PA257_3508 PF06506 Propionate catabolism activator PA257_3510 PF02470 MlaD protein PA257_3511 PF04403 Paraquat-inducible protein A PA257_3512 PF00171 Aldehyde dehydrogenase family PA257_3514 PF13378 Enolase C-terminal domain-like PA257_3514 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PA257_3515 PF07690 Major Facilitator Superfamily PA257_3516 PF03573 outer membrane porin, OprD family PA257_3517 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PA257_3518 PF04909 Amidohydrolase PA257_3519 PF07690 Major Facilitator Superfamily PA257_3522 PF01970 Tripartite tricarboxylate transporter TctA family PA257_3523 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3523 PF03466 LysR substrate binding domain PA257_3526 PF00528 Binding-protein-dependent transport system inner membrane component PA257_3527 PF00528 Binding-protein-dependent transport system inner membrane component PA257_3529 PF00563 EAL domain PA257_3529 PF03707 Bacterial signalling protein N terminal repeat PA257_3529 PF00990 Diguanylate cyclase, GGDEF domain PA257_3530 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PA257_3530 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PA257_3532 PF16884 N-terminal domain of oxidoreductase PA257_3532 PF00107 Zinc-binding dehydrogenase PA257_3533 PF16925 Tetracyclin repressor-like, C-terminal domain PA257_3533 PF00440 Bacterial regulatory proteins, tetR family PA257_3534 PF01266 FAD dependent oxidoreductase PA257_3535 PF04324 BFD-like [2Fe-2S] binding domain PA257_3535 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_3538 PF00571 CBS domain PA257_3539 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain PA257_3539 PF03497 Anthrax toxin LF subunit PA257_3542 PF04107 Glutamate-cysteine ligase family 2(GCS2) PA257_3545 PF05175 Methyltransferase small domain PA257_3545 PF17827 PrmC N-terminal domain PA257_3548 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_3548 PF00072 Response regulator receiver domain PA257_3548 PF13426 PAS domain PA257_3554 PF05343 M42 glutamyl aminopeptidase PA257_3561 PF08323 Starch synthase catalytic domain PA257_3561 PF00534 Glycosyl transferases group 1 PA257_3562 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PA257_3562 PF00128 Alpha amylase, catalytic domain PA257_3562 PF11941 Domain of unknown function (DUF3459) PA257_3563 PF02446 4-alpha-glucanotransferase PA257_3564 PF00128 Alpha amylase, catalytic domain PA257_3566 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PA257_3566 PF00128 Alpha amylase, catalytic domain PA257_3569 PF00107 Zinc-binding dehydrogenase PA257_3569 PF08240 Alcohol dehydrogenase GroES-like domain PA257_3569 PF13823 Alcohol dehydrogenase GroES-associated PA257_3571 PF03372 Endonuclease/Exonuclease/phosphatase family PA257_3572 PF13091 PLD-like domain PA257_3573 PF03706 Lysylphosphatidylglycerol synthase TM region PA257_3574 PF00128 Alpha amylase, catalytic domain PA257_3574 PF02806 Alpha amylase, C-terminal all-beta domain PA257_3574 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PA257_3575 PF16657 Maltogenic Amylase, C-terminal domain PA257_3575 PF00128 Alpha amylase, catalytic domain PA257_3576 PF11896 Domain of unknown function (DUF3416) PA257_3576 PF00128 Alpha amylase, catalytic domain PA257_3577 PF02735 Ku70/Ku80 beta-barrel domain PA257_3579 PF02308 MgtC family PA257_3581 PF06628 Catalase-related immune-responsive PA257_3581 PF18011 C-terminal domain found in long catalases PA257_3581 PF00199 Catalase PA257_3585 PF00343 Carbohydrate phosphorylase PA257_3589 PF02464 Competence-damaged protein PA257_3592 PF13298 DNA polymerase Ligase (LigD) PA257_3592 PF01068 ATP dependent DNA ligase domain PA257_3592 PF04679 ATP dependent DNA ligase C terminal region PA257_3595 PF04239 Protein of unknown function (DUF421) PA257_3599 PF02753 Pili assembly chaperone PapD, C-terminal domain PA257_3599 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain PA257_3601 PF13953 PapC C-terminal domain PA257_3601 PF00577 Outer membrane usher protein PA257_3601 PF13954 PapC N-terminal domain PA257_3602 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain PA257_3602 PF02753 Pili assembly chaperone PapD, C-terminal domain PA257_3605 PF11922 Domain of unknown function (DUF3440) PA257_3605 PF01507 Phosphoadenosine phosphosulfate reductase family PA257_3607 PF02195 ParB-like nuclease domain PA257_3609 PF05199 GMC oxidoreductase PA257_3609 PF00732 GMC oxidoreductase PA257_3610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3610 PF03466 LysR substrate binding domain PA257_3613 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3613 PF03466 LysR substrate binding domain PA257_3618 PF12833 Helix-turn-helix domain PA257_3618 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PA257_3618 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PA257_3618 PF02805 Metal binding domain of Ada PA257_3621 PF07286 Protein of unknown function (DUF1445) PA257_3622 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3622 PF03466 LysR substrate binding domain PA257_3625 PF03573 outer membrane porin, OprD family PA257_3626 PF03746 LamB/YcsF family PA257_3628 PF02626 Carboxyltransferase domain, subdomain A and B PA257_3630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PA257_3630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PA257_3630 PF00205 Thiamine pyrophosphate enzyme, central domain PA257_3632 PF00106 short chain dehydrogenase PA257_3633 PF07859 alpha/beta hydrolase fold PA257_3634 PF00743 Flavin-binding monooxygenase-like PA257_3635 PF12833 Helix-turn-helix domain PA257_3635 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PA257_3638 PF04545 Sigma-70, region 4 PA257_3638 PF04542 Sigma-70 region 2 PA257_3639 PF07690 Major Facilitator Superfamily PA257_3641 PF00296 Luciferase-like monooxygenase PA257_3642 PF07715 TonB-dependent Receptor Plug Domain PA257_3642 PF00593 TonB dependent receptor PA257_3645 PF00561 alpha/beta hydrolase fold PA257_3646 PF00866 Ring hydroxylating beta subunit PA257_3647 PF13537 Glutamine amidotransferase domain PA257_3647 PF00733 Asparagine synthase PA257_3648 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PA257_3648 PF00355 Rieske [2Fe-2S] domain PA257_3649 PF01037 Lrp/AsnC ligand binding domain PA257_3650 PF04199 Putative cyclase PA257_3651 PF00266 Aminotransferase class-V PA257_3653 PF00324 Amino acid permease PA257_3660 PF08448 PAS fold PA257_3660 PF00990 Diguanylate cyclase, GGDEF domain PA257_3660 PF00563 EAL domain PA257_3660 PF08447 PAS fold PA257_3661 PF00679 Elongation factor G C-terminus PA257_3661 PF03764 Elongation factor G, domain IV PA257_3661 PF03144 Elongation factor Tu domain 2 PA257_3661 PF00009 Elongation factor Tu GTP binding domain PA257_3661 PF14492 Elongation Factor G, domain II PA257_3662 PF07715 TonB-dependent Receptor Plug Domain PA257_3662 PF00593 TonB dependent receptor PA257_3664 PF16861 Carbamoyltransferase C-terminus PA257_3664 PF02543 Carbamoyltransferase N-terminus PA257_3665 PF12832 MFS_1 like family PA257_3668 PF00394 Multicopper oxidase PA257_3668 PF07732 Multicopper oxidase PA257_3668 PF07731 Multicopper oxidase PA257_3669 PF05275 Copper resistance protein B precursor (CopB) PA257_3671 PF00266 Aminotransferase class-V PA257_3672 PF00005 ABC transporter PA257_3672 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PA257_3673 PF12911 N-terminal TM domain of oligopeptide transport permease C PA257_3673 PF00528 Binding-protein-dependent transport system inner membrane component PA257_3674 PF00528 Binding-protein-dependent transport system inner membrane component PA257_3675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PA257_3676 PF00593 TonB dependent receptor PA257_3676 PF07715 TonB-dependent Receptor Plug Domain PA257_3677 PF03466 LysR substrate binding domain PA257_3677 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3678 PF07690 Major Facilitator Superfamily PA257_3679 PF03466 LysR substrate binding domain PA257_3679 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3680 PF00484 Carbonic anhydrase PA257_3681 PF02560 Cyanate lyase C-terminal domain PA257_3683 PF04542 Sigma-70 region 2 PA257_3683 PF08281 Sigma-70, region 4 PA257_3687 PF06719 AraC-type transcriptional regulator N-terminus PA257_3687 PF12833 Helix-turn-helix domain PA257_3689 PF01809 Putative membrane protein insertion efficiency factor PA257_3692 PF00849 RNA pseudouridylate synthase PA257_3693 PF00375 Sodium:dicarboxylate symporter family PA257_3695 PF00324 Amino acid permease PA257_3696 PF00120 Glutamine synthetase, catalytic domain PA257_3701 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PA257_3701 PF00205 Thiamine pyrophosphate enzyme, central domain PA257_3701 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PA257_3703 PF08021 Siderophore-interacting FAD-binding domain PA257_3703 PF04954 Siderophore-interacting protein PA257_3704 PF00392 Bacterial regulatory proteins, gntR family PA257_3704 PF00155 Aminotransferase class I and II PA257_3709 PF01037 Lrp/AsnC ligand binding domain PA257_3709 PF13404 AsnC-type helix-turn-helix domain PA257_3711 PF13593 SBF-like CPA transporter family (DUF4137) PA257_3712 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_3712 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PA257_3713 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PA257_3714 PF00483 Nucleotidyl transferase PA257_3715 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PA257_3715 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PA257_3715 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PA257_3717 PF08361 MAATS-type transcriptional repressor, C-terminal region PA257_3717 PF00440 Bacterial regulatory proteins, tetR family PA257_3718 PF00529 HlyD membrane-fusion protein of T1SS PA257_3718 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PA257_3719 PF00873 AcrB/AcrD/AcrF family PA257_3721 PF06977 SdiA-regulated PA257_3722 PF13411 MerR HTH family regulatory protein PA257_3723 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_3723 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_3723 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_3725 PF01039 Carboxyl transferase domain PA257_3727 PF02785 Biotin carboxylase C-terminal domain PA257_3727 PF00289 Biotin carboxylase, N-terminal domain PA257_3727 PF00364 Biotin-requiring enzyme PA257_3727 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PA257_3728 PF00682 HMGL-like PA257_3730 PF04209 homogentisate 1,2-dioxygenase PA257_3731 PF01557 Fumarylacetoacetate (FAA) hydrolase family PA257_3732 PF13417 Glutathione S-transferase, N-terminal domain PA257_3733 PF07690 Major Facilitator Superfamily PA257_3734 PF02954 Bacterial regulatory protein, Fis family PA257_3734 PF00989 PAS fold PA257_3734 PF00158 Sigma-54 interaction domain PA257_3736 PF00106 short chain dehydrogenase PA257_3737 PF02667 Short chain fatty acid transporter PA257_3738 PF00108 Thiolase, N-terminal domain PA257_3738 PF02803 Thiolase, C-terminal domain PA257_3739 PF01144 Coenzyme A transferase PA257_3740 PF01144 Coenzyme A transferase PA257_3741 PF03466 LysR substrate binding domain PA257_3741 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3742 PF13193 AMP-binding enzyme C-terminal domain PA257_3742 PF00501 AMP-binding enzyme PA257_3746 PF07690 Major Facilitator Superfamily PA257_3747 PF00512 His Kinase A (phospho-acceptor) domain PA257_3747 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_3748 PF00465 Iron-containing alcohol dehydrogenase PA257_3750 PF04055 Radical SAM superfamily PA257_3750 PF13186 Iron-sulfur cluster-binding domain PA257_3751 PF05402 Coenzyme PQQ synthesis protein D (PqqD) PA257_3752 PF03070 TENA/THI-4/PQQC family PA257_3753 PF12706 Beta-lactamase superfamily domain PA257_3754 PF08042 PqqA family PA257_3756 PF00171 Aldehyde dehydrogenase family PA257_3760 PF00072 Response regulator receiver domain PA257_3760 PF00196 Bacterial regulatory proteins, luxR family PA257_3761 PF07730 Histidine kinase PA257_3761 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_3761 PF05231 MASE1 PA257_3763 PF00196 Bacterial regulatory proteins, luxR family PA257_3763 PF00072 Response regulator receiver domain PA257_3764 PF00892 EamA-like transporter family PA257_3765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_3765 PF00512 His Kinase A (phospho-acceptor) domain PA257_3765 PF09456 RcsC Alpha-Beta-Loop (ABL) PA257_3765 PF00072 Response regulator receiver domain PA257_3768 PF05193 Peptidase M16 inactive domain PA257_3768 PF00675 Insulinase (Peptidase family M16) PA257_3769 PF08019 Phosphoethanolamine transferase EptA/EptB PA257_3769 PF00884 Sulfatase PA257_3771 PF05525 Branched-chain amino acid transport protein PA257_3778 PF12848 ABC transporter PA257_3778 PF00005 ABC transporter PA257_3780 PF02525 Flavodoxin-like fold PA257_3781 PF03466 LysR substrate binding domain PA257_3781 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3782 PF00313 'Cold-shock' DNA-binding domain PA257_3783 PF02673 Bacitracin resistance protein BacA PA257_3792 PF00294 pfkB family carbohydrate kinase PA257_3793 PF00356 Bacterial regulatory proteins, lacI family PA257_3794 PF02653 Branched-chain amino acid transport system / permease component PA257_3795 PF00005 ABC transporter PA257_3796 PF13407 Periplasmic binding protein domain PA257_3798 PF02954 Bacterial regulatory protein, Fis family PA257_3798 PF00158 Sigma-54 interaction domain PA257_3798 PF00072 Response regulator receiver domain PA257_3803 PF00199 Catalase PA257_3808 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PA257_3808 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PA257_3809 PF00941 FAD binding domain in molybdopterin dehydrogenase PA257_3809 PF03450 CO dehydrogenase flavoprotein C-terminal domain PA257_3810 PF10518 TAT (twin-arginine translocation) pathway signal sequence PA257_3810 PF01799 [2Fe-2S] binding domain PA257_3810 PF00111 2Fe-2S iron-sulfur cluster binding domain PA257_3811 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_3811 PF08447 PAS fold PA257_3811 PF13426 PAS domain PA257_3813 PF13302 Acetyltransferase (GNAT) domain PA257_3814 PF01717 Cobalamin-independent synthase, Catalytic domain PA257_3814 PF08267 Cobalamin-independent synthase, N-terminal domain PA257_3815 PF18381 YcaO cyclodehydratase C-terminal domain PA257_3815 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding PA257_3818 PF02514 CobN/Magnesium Chelatase PA257_3820 PF07715 TonB-dependent Receptor Plug Domain PA257_3820 PF00593 TonB dependent receptor PA257_3821 PF01795 MraW methylase family PA257_3823 PF00317 Ribonucleotide reductase, all-alpha domain PA257_3823 PF02867 Ribonucleotide reductase, barrel domain PA257_3823 PF03477 ATP cone domain PA257_3826 PF01266 FAD dependent oxidoreductase PA257_3830 PF13556 PucR C-terminal helix-turn-helix domain PA257_3830 PF07905 Purine catabolism regulatory protein-like family PA257_3834 PF04542 Sigma-70 region 2 PA257_3834 PF08281 Sigma-70, region 4 PA257_3835 PF04773 FecR protein PA257_3835 PF16220 Domain of unknown function (DUF4880) PA257_3836 PF00593 TonB dependent receptor PA257_3836 PF07715 TonB-dependent Receptor Plug Domain PA257_3837 PF03929 PepSY-associated TM region PA257_3839 PF07690 Major Facilitator Superfamily PA257_3842 PF01243 Pyridoxamine 5'-phosphate oxidase PA257_3842 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PA257_3843 PF02567 Phenazine biosynthesis-like protein PA257_3844 PF00117 Glutamine amidotransferase class-I PA257_3844 PF00425 chorismate binding enzyme PA257_3845 PF00857 Isochorismatase family PA257_3846 PF01474 Class-II DAHP synthetase family PA257_3847 PF03284 Phenazine biosynthesis protein A/B PA257_3848 PF03284 Phenazine biosynthesis protein A/B PA257_3849 PF03472 Autoinducer binding domain PA257_3849 PF00196 Bacterial regulatory proteins, luxR family PA257_3855 PF01804 Penicillin amidase PA257_3858 PF13417 Glutathione S-transferase, N-terminal domain PA257_3858 PF00043 Glutathione S-transferase, C-terminal domain PA257_3863 PF03104 DNA polymerase family B, exonuclease domain PA257_3863 PF00136 DNA polymerase family B PA257_3866 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PA257_3867 PF00893 Small Multidrug Resistance protein PA257_3868 PF01799 [2Fe-2S] binding domain PA257_3868 PF00111 2Fe-2S iron-sulfur cluster binding domain PA257_3869 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PA257_3872 PF00529 HlyD membrane-fusion protein of T1SS PA257_3872 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PA257_3873 PF03412 Peptidase C39 family PA257_3873 PF00005 ABC transporter PA257_3873 PF00664 ABC transporter transmembrane region PA257_3879 PF01551 Peptidase family M23 PA257_3881 PF00550 Phosphopantetheine attachment site PA257_3882 PF03958 Bacterial type II/III secretion system short domain PA257_3882 PF00263 Bacterial type II and III secretion system protein PA257_3886 PF18081 Fanconi anemia-associated nuclease SAP domain PA257_3886 PF08774 VRR-NUC domain PA257_3888 PF00440 Bacterial regulatory proteins, tetR family PA257_3888 PF08361 MAATS-type transcriptional repressor, C-terminal region PA257_3890 PF00528 Binding-protein-dependent transport system inner membrane component PA257_3891 PF00005 ABC transporter PA257_3891 PF03459 TOBE domain PA257_3892 PF04072 Leucine carboxyl methyltransferase PA257_3893 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3893 PF03466 LysR substrate binding domain PA257_3894 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase PA257_3895 PF02386 Cation transport protein PA257_3896 PF05661 Protein of unknown function (DUF808) PA257_3898 PF00115 Cytochrome C and Quinol oxidase polypeptide I PA257_3900 PF00571 CBS domain PA257_3900 PF01769 Divalent cation transporter PA257_3900 PF03448 MgtE intracellular N domain PA257_3901 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3901 PF03466 LysR substrate binding domain PA257_3903 PF00990 Diguanylate cyclase, GGDEF domain PA257_3903 PF00563 EAL domain PA257_3903 PF01590 GAF domain PA257_3903 PF00360 Phytochrome region PA257_3905 PF12833 Helix-turn-helix domain PA257_3905 PF01965 DJ-1/PfpI family PA257_3906 PF06906 Protein of unknown function (DUF1272) PA257_3908 PF01106 NifU-like domain PA257_3908 PF01521 Iron-sulphur cluster biosynthesis PA257_3912 PF02574 Homocysteine S-methyltransferase PA257_3912 PF00809 Pterin binding enzyme PA257_3912 PF02965 Vitamin B12 dependent methionine synthase, activation domain PA257_3912 PF02607 B12 binding domain PA257_3912 PF02310 B12 binding domain PA257_3916 PF04055 Radical SAM superfamily PA257_3920 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PA257_3920 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PA257_3925 PF08240 Alcohol dehydrogenase GroES-like domain PA257_3925 PF00107 Zinc-binding dehydrogenase PA257_3926 PF01343 Peptidase family S49 PA257_3926 PF08496 Peptidase family S49 N-terminal PA257_3932 PF03466 LysR substrate binding domain PA257_3932 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_3933 PF00565 Staphylococcal nuclease homologue PA257_3934 PF01925 Sulfite exporter TauE/SafE PA257_3935 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain PA257_3935 PF00293 NUDIX domain PA257_3935 PF09297 NADH pyrophosphatase zinc ribbon domain PA257_3937 PF00378 Enoyl-CoA hydratase/isomerase PA257_3939 PF06450 Bacterial Na+/H+ antiporter B (NhaB) PA257_3940 PF13520 Amino acid permease PA257_3941 PF01276 Orn/Lys/Arg decarboxylase, major domain PA257_3941 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain PA257_3941 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain PA257_3943 PF00929 Exonuclease PA257_3944 PF00075 RNase H PA257_3946 PF16123 Hydroxyacylglutathione hydrolase C-terminus PA257_3946 PF00753 Metallo-beta-lactamase superfamily PA257_3947 PF01464 Transglycosylase SLT domain PA257_3947 PF01476 LysM domain PA257_3948 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PA257_3949 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PA257_3950 PF00528 Binding-protein-dependent transport system inner membrane component PA257_3951 PF12911 N-terminal TM domain of oligopeptide transport permease C PA257_3951 PF00528 Binding-protein-dependent transport system inner membrane component PA257_3952 PF00005 ABC transporter PA257_3952 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PA257_3954 PF05698 Bacterial trigger factor protein (TF) C-terminus PA257_3956 PF00216 Bacterial DNA-binding protein PA257_3957 PF02190 ATP-dependent protease La (LON) substrate-binding domain PA257_3957 PF00004 ATPase family associated with various cellular activities (AAA) PA257_3957 PF05362 Lon protease (S16) C-terminal proteolytic domain PA257_3958 PF10431 C-terminal, D2-small domain, of ClpB protein PA257_3958 PF06689 ClpX C4-type zinc finger PA257_3958 PF07724 AAA domain (Cdc48 subfamily) PA257_3959 PF00574 Clp protease PA257_3960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PA257_3960 PF05697 Bacterial trigger factor protein (TF) PA257_3960 PF05698 Bacterial trigger factor protein (TF) C-terminus PA257_3962 PF00486 Transcriptional regulatory protein, C terminal PA257_3962 PF00072 Response regulator receiver domain PA257_3963 PF00512 His Kinase A (phospho-acceptor) domain PA257_3963 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_3963 PF00672 HAMP domain PA257_3964 PF00144 Beta-lactamase PA257_3973 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PA257_3973 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PA257_3974 PF01406 tRNA synthetases class I (C) catalytic domain PA257_3974 PF09190 DALR domain PA257_3975 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PA257_3975 PF00749 tRNA synthetases class I (E and Q), catalytic domain PA257_3976 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PA257_3977 PF00149 Calcineurin-like phosphoesterase PA257_3979 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) PA257_3980 PF00582 Universal stress protein family PA257_3983 PF00330 Aconitase family (aconitate hydratase) PA257_3983 PF06434 Aconitate hydratase 2 N-terminus PA257_3983 PF11791 Aconitate B N-terminal domain PA257_3985 PF01339 CheB methylesterase PA257_3985 PF00072 Response regulator receiver domain PA257_3988 PF07690 Major Facilitator Superfamily PA257_3989 PF00069 Protein kinase domain PA257_3989 PF03793 PASTA domain PA257_3990 PF18267 Rubredoxin NAD+ reductase C-terminal domain PA257_3990 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_3990 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PA257_3990 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PA257_3990 PF04324 BFD-like [2Fe-2S] binding domain PA257_3991 PF00355 Rieske [2Fe-2S] domain PA257_3992 PF04324 BFD-like [2Fe-2S] binding domain PA257_3992 PF01568 Molydopterin dinucleotide binding domain PA257_3992 PF00384 Molybdopterin oxidoreductase PA257_3992 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PA257_3993 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PA257_3994 PF00691 OmpA family PA257_3994 PF05736 OprF membrane domain PA257_3996 PF05552 Conserved TM helix PA257_3998 PF01544 CorA-like Mg2+ transporter protein PA257_3999 PF03737 Aldolase/RraA PA257_4001 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PA257_4001 PF00391 PEP-utilising enzyme, mobile domain PA257_4001 PF02896 PEP-utilising enzyme, TIM barrel domain PA257_4003 PF03618 Kinase/pyrophosphorylase PA257_4004 PF18030 RimK PreATP-grasp domain PA257_4004 PF08443 RimK-like ATP-grasp domain PA257_4013 PF17874 MalT-like TPR region PA257_4013 PF00196 Bacterial regulatory proteins, luxR family PA257_4014 PF00196 Bacterial regulatory proteins, luxR family PA257_4014 PF17874 MalT-like TPR region PA257_4015 PF00425 chorismate binding enzyme PA257_4015 PF04715 Anthranilate synthase component I, N terminal region PA257_4017 PF01507 Phosphoadenosine phosphosulfate reductase family PA257_4019 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4019 PF03466 LysR substrate binding domain PA257_4022 PF02558 Ketopantoate reductase PanE/ApbA PA257_4022 PF08546 Ketopantoate reductase PanE/ApbA C terminal PA257_4024 PF00793 DAHP synthetase I family PA257_4032 PF02540 NAD synthase PA257_4032 PF00958 GMP synthase C terminal domain PA257_4032 PF00117 Glutamine amidotransferase class-I PA257_4035 PF00248 Aldo/keto reductase family PA257_4036 PF03466 LysR substrate binding domain PA257_4036 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4037 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PA257_4037 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PA257_4037 PF00378 Enoyl-CoA hydratase/isomerase PA257_4038 PF02803 Thiolase, C-terminal domain PA257_4038 PF00108 Thiolase, N-terminal domain PA257_4042 PF08379 Bacterial transglutaminase-like N-terminal region PA257_4042 PF01841 Transglutaminase-like superfamily PA257_4043 PF14403 Circularly permuted ATP-grasp type 2 PA257_4043 PF04168 A predicted alpha-helical domain with a conserved ER motif. PA257_4044 PF14403 Circularly permuted ATP-grasp type 2 PA257_4047 PF00563 EAL domain PA257_4047 PF03707 Bacterial signalling protein N terminal repeat PA257_4047 PF00990 Diguanylate cyclase, GGDEF domain PA257_4048 PF01915 Glycosyl hydrolase family 3 C-terminal domain PA257_4048 PF00933 Glycosyl hydrolase family 3 N terminal domain PA257_4048 PF14310 Fibronectin type III-like domain PA257_4049 PF02108 Flagellar assembly protein FliH PA257_4050 PF06578 YOP proteins translocation protein K (YscK) PA257_4051 PF01514 Secretory protein of YscJ/FliF family PA257_4052 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI PA257_4054 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) PA257_4055 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF PA257_4056 PF16697 Inner membrane component of T3SS, cytoplasmic domain PA257_4056 PF16693 Inner membrane component of T3SS, periplasmic domain PA257_4058 PF05932 Tir chaperone protein (CesT) family PA257_4061 PF12833 Helix-turn-helix domain PA257_4062 PF09619 Type III secretion system lipoprotein chaperone (YscW) PA257_4064 PF05932 Tir chaperone protein (CesT) family PA257_4066 PF04888 Secretion system effector C (SseC) like family PA257_4067 PF07720 Tetratricopeptide repeat PA257_4068 PF04792 V antigen (LcrV) protein PA257_4070 PF09621 Type III secretion system regulator (LcrR) PA257_4071 PF00771 FHIPEP family PA257_4075 PF09059 TyeA PA257_4076 PF07201 HrpJ-like domain PA257_4077 PF02874 ATP synthase alpha/beta family, beta-barrel domain PA257_4077 PF18269 T3SS EscN ATPase C-terminal domain PA257_4077 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PA257_4080 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PA257_4081 PF00813 FliP family PA257_4082 PF01313 Bacterial export proteins, family 3 PA257_4083 PF01311 Bacterial export proteins, family 1 PA257_4084 PF01312 FlhB HrpN YscU SpaS Family PA257_4087 PF17284 Spermidine synthase tetramerisation domain PA257_4088 PF02805 Metal binding domain of Ada PA257_4088 PF06029 AlkA N-terminal domain PA257_4088 PF12833 Helix-turn-helix domain PA257_4088 PF00730 HhH-GPD superfamily base excision DNA repair protein PA257_4091 PF03079 ARD/ARD' family PA257_4092 PF00596 Class II Aldolase and Adducin N-terminal domain PA257_4094 PF01264 Chorismate synthase PA257_4097 PF05175 Methyltransferase small domain PA257_4100 PF01713 Smr domain PA257_4101 PF01227 GTP cyclohydrolase I PA257_4102 PF01814 Hemerythrin HHE cation binding domain PA257_4104 PF00069 Protein kinase domain PA257_4104 PF03793 PASTA domain PA257_4112 PF02954 Bacterial regulatory protein, Fis family PA257_4112 PF00072 Response regulator receiver domain PA257_4112 PF00158 Sigma-54 interaction domain PA257_4113 PF07724 AAA domain (Cdc48 subfamily) PA257_4113 PF17871 AAA lid domain PA257_4113 PF00004 ATPase family associated with various cellular activities (AAA) PA257_4113 PF10431 C-terminal, D2-small domain, of ClpB protein PA257_4120 PF05638 Type VI secretion system effector, Hcp PA257_4121 PF16671 Actin cross-linking domain PA257_4121 PF04717 Type VI secretion system, phage-baseplate injector PA257_4123 PF05593 RHS Repeat PA257_4123 PF03527 RHS protein PA257_4125 PF02798 Glutathione S-transferase, N-terminal domain PA257_4126 PF00155 Aminotransferase class I and II PA257_4129 PF03594 Benzoate membrane transport protein PA257_4132 PF16884 N-terminal domain of oxidoreductase PA257_4132 PF00107 Zinc-binding dehydrogenase PA257_4134 PF00916 Sulfate permease family PA257_4134 PF01740 STAS domain PA257_4135 PF16591 Helical bimodular sensor domain PA257_4135 PF00672 HAMP domain PA257_4135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_4137 PF01613 Flavin reductase like domain PA257_4140 PF02769 AIR synthase related protein, C-terminal domain PA257_4140 PF00586 AIR synthase related protein, N-terminal domain PA257_4142 PF01734 Patatin-like phospholipase PA257_4144 PF04960 Glutaminase PA257_4145 PF00072 Response regulator receiver domain PA257_4145 PF00486 Transcriptional regulatory protein, C terminal PA257_4146 PF13493 Domain of unknown function (DUF4118) PA257_4146 PF13492 GAF domain PA257_4146 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_4146 PF02702 Osmosensitive K+ channel His kinase sensor domain PA257_4146 PF00512 His Kinase A (phospho-acceptor) domain PA257_4147 PF02669 K+-transporting ATPase, c chain PA257_4149 PF03814 Potassium-transporting ATPase A subunit PA257_4151 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_4151 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_4151 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_4152 PF09339 IclR helix-turn-helix domain PA257_4153 PF00378 Enoyl-CoA hydratase/isomerase PA257_4154 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PA257_4154 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PA257_4154 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain PA257_4155 PF00392 Bacterial regulatory proteins, gntR family PA257_4155 PF07729 FCD domain PA257_4156 PF07690 Major Facilitator Superfamily PA257_4157 PF01594 AI-2E family transporter PA257_4159 PF02798 Glutathione S-transferase, N-terminal domain PA257_4159 PF00043 Glutathione S-transferase, C-terminal domain PA257_4164 PF03061 Thioesterase superfamily PA257_4165 PF00501 AMP-binding enzyme PA257_4168 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PA257_4168 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PA257_4169 PF00593 TonB dependent receptor PA257_4169 PF07715 TonB-dependent Receptor Plug Domain PA257_4171 PF00072 Response regulator receiver domain PA257_4171 PF01627 Hpt domain PA257_4171 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PA257_4171 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_4171 PF00672 HAMP domain PA257_4171 PF00512 His Kinase A (phospho-acceptor) domain PA257_4172 PF07977 FabA-like domain PA257_4173 PF02801 Beta-ketoacyl synthase, C-terminal domain PA257_4173 PF00109 Beta-ketoacyl synthase, N-terminal domain PA257_4174 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_4174 PF00672 HAMP domain PA257_4174 PF12729 Four helix bundle sensory module for signal transduction PA257_4175 PF01638 HxlR-like helix-turn-helix PA257_4179 PF12802 MarR family PA257_4180 PF01799 [2Fe-2S] binding domain PA257_4180 PF00111 2Fe-2S iron-sulfur cluster binding domain PA257_4181 PF00034 Cytochrome c PA257_4181 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PA257_4181 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PA257_4182 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PA257_4182 PF00034 Cytochrome c PA257_4182 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PA257_4183 PF02311 AraC-like ligand binding domain PA257_4183 PF12833 Helix-turn-helix domain PA257_4184 PF02548 Ketopantoate hydroxymethyltransferase PA257_4186 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_4186 PF00183 Hsp90 protein PA257_4193 PF05525 Branched-chain amino acid transport protein PA257_4194 PF02629 CoA binding domain PA257_4194 PF00549 CoA-ligase PA257_4195 PF00549 CoA-ligase PA257_4195 PF08442 ATP-grasp domain PA257_4196 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PA257_4196 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_4197 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PA257_4197 PF02817 e3 binding domain PA257_4197 PF00364 Biotin-requiring enzyme PA257_4198 PF16870 2-oxoglutarate dehydrogenase C-terminal PA257_4198 PF00676 Dehydrogenase E1 component PA257_4198 PF16078 2-oxoglutarate dehydrogenase N-terminus PA257_4198 PF02779 Transketolase, pyrimidine binding domain PA257_4199 PF13085 2Fe-2S iron-sulfur cluster binding domain PA257_4200 PF00890 FAD binding domain PA257_4200 PF02910 Fumarate reductase flavoprotein C-term PA257_4201 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PA257_4202 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PA257_4203 PF00285 Citrate synthase, C-terminal domain PA257_4204 PF01852 START domain PA257_4205 PF03692 Putative zinc- or iron-chelating domain PA257_4208 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PA257_4208 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PA257_4210 PF06865 Pyrimidine/purine nucleoside phosphorylase PA257_4211 PF06940 Domain of unknown function (DUF1287) PA257_4214 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4214 PF03466 LysR substrate binding domain PA257_4218 PF01042 Endoribonuclease L-PSP PA257_4219 PF01266 FAD dependent oxidoreductase PA257_4220 PF00120 Glutamine synthetase, catalytic domain PA257_4221 PF01266 FAD dependent oxidoreductase PA257_4222 PF01206 Sulfurtransferase TusA PA257_4223 PF18125 RlmM ferredoxin-like domain PA257_4223 PF01728 FtsJ-like methyltransferase PA257_4224 PF00694 Aconitase C-terminal domain PA257_4224 PF00330 Aconitase family (aconitate hydratase) PA257_4225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_4225 PF08447 PAS fold PA257_4228 PF00115 Cytochrome C and Quinol oxidase polypeptide I PA257_4231 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PA257_4231 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP PA257_4232 PF00115 Cytochrome C and Quinol oxidase polypeptide I PA257_4235 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PA257_4235 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP PA257_4237 PF12801 4Fe-4S binding domain PA257_4237 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase PA257_4237 PF13746 4Fe-4S dicluster domain PA257_4239 PF00403 Heavy-metal-associated domain PA257_4242 PF06969 HemN C-terminal domain PA257_4242 PF04055 Radical SAM superfamily PA257_4244 PF00325 Bacterial regulatory proteins, crp family PA257_4244 PF00027 Cyclic nucleotide-binding domain PA257_4245 PF00156 Phosphoribosyl transferase domain PA257_4247 PF00893 Small Multidrug Resistance protein PA257_4248 PF00440 Bacterial regulatory proteins, tetR family PA257_4250 PF00743 Flavin-binding monooxygenase-like PA257_4251 PF00106 short chain dehydrogenase PA257_4252 PF03691 Uncharacterised protein family (UPF0167) PA257_4253 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_4253 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_4253 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_4254 PF13662 Toprim domain PA257_4254 PF02132 RecR protein PA257_4255 PF02575 YbaB/EbfC DNA-binding family PA257_4256 PF12169 DNA polymerase III subunits gamma and tau domain III PA257_4256 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding PA257_4256 PF12170 DNA polymerase III tau subunit V interacting with alpha PA257_4259 PF03120 NAD-dependent DNA ligase OB-fold domain PA257_4259 PF01653 NAD-dependent DNA ligase adenylation domain PA257_4259 PF12826 Helix-hairpin-helix motif PA257_4259 PF00533 BRCA1 C Terminus (BRCT) domain PA257_4259 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PA257_4260 PF04354 ZipA, C-terminal FtsZ-binding domain PA257_4261 PF06470 SMC proteins Flexible Hinge Domain PA257_4261 PF02463 RecF/RecN/SMC N terminal domain PA257_4263 PF00487 Fatty acid desaturase PA257_4265 PF00111 2Fe-2S iron-sulfur cluster binding domain PA257_4265 PF01799 [2Fe-2S] binding domain PA257_4266 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PA257_4266 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PA257_4268 PF01979 Amidohydrolase family PA257_4271 PF00860 Permease family PA257_4272 PF00576 HIUase/Transthyretin family PA257_4273 PF01522 Polysaccharide deacetylase PA257_4275 PF03561 Allantoicase repeat PA257_4276 PF04115 Ureidoglycolate lyase PA257_4278 PF05638 Type VI secretion system effector, Hcp PA257_4280 PF04717 Type VI secretion system, phage-baseplate injector PA257_4286 PF00860 Permease family PA257_4288 PF06463 Molybdenum Cofactor Synthesis C PA257_4288 PF04055 Radical SAM superfamily PA257_4289 PF00440 Bacterial regulatory proteins, tetR family PA257_4289 PF08362 YcdC-like protein, C-terminal region PA257_4291 PF00205 Thiamine pyrophosphate enzyme, central domain PA257_4291 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PA257_4291 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PA257_4292 PF01261 Xylose isomerase-like TIM barrel PA257_4293 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PA257_4293 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PA257_4294 PF05161 MOFRL family PA257_4294 PF13660 Domain of unknown function (DUF4147) PA257_4295 PF00224 Pyruvate kinase, barrel domain PA257_4295 PF02887 Pyruvate kinase, alpha/beta domain PA257_4296 PF03253 Urea transporter PA257_4297 PF00027 Cyclic nucleotide-binding domain PA257_4297 PF00520 Ion transport protein PA257_4302 PF04346 Ethanolamine utilisation protein, EutH PA257_4303 PF08220 DeoR-like helix-turn-helix domain PA257_4303 PF00455 DeoR C terminal sensor domain PA257_4304 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_4304 PF04324 BFD-like [2Fe-2S] binding domain PA257_4305 PF04324 BFD-like [2Fe-2S] binding domain PA257_4305 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_4306 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PA257_4306 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PA257_4307 PF03576 Peptidase family S58 PA257_4309 PF00072 Response regulator receiver domain PA257_4309 PF00196 Bacterial regulatory proteins, luxR family PA257_4312 PF03918 Cytochrome C biogenesis protein PA257_4313 PF08534 Redoxin PA257_4314 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal PA257_4314 PF01578 Cytochrome C assembly protein PA257_4315 PF03100 CcmE PA257_4316 PF04995 Heme exporter protein D (CcmD) PA257_4317 PF01578 Cytochrome C assembly protein PA257_4318 PF03379 CcmB protein PA257_4319 PF00005 ABC transporter PA257_4321 PF01312 FlhB HrpN YscU SpaS Family PA257_4329 PF01584 CheW-like domain PA257_4331 PF13614 AAA domain PA257_4332 PF00691 OmpA family PA257_4332 PF13677 Membrane MotB of proton-channel complex MotA/MotB PA257_4333 PF01618 MotA/TolQ/ExbB proton channel family PA257_4334 PF01339 CheB methylesterase PA257_4334 PF00072 Response regulator receiver domain PA257_4335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_4335 PF01584 CheW-like domain PA257_4335 PF07194 P2 response regulator binding domain PA257_4335 PF02895 Signal transducing histidine kinase, homodimeric domain PA257_4335 PF01627 Hpt domain PA257_4336 PF04344 Chemotaxis phosphatase, CheZ PA257_4337 PF00072 Response regulator receiver domain PA257_4338 PF04545 Sigma-70, region 4 PA257_4338 PF04542 Sigma-70 region 2 PA257_4338 PF04539 Sigma-70 region 3 PA257_4339 PF10609 NUBPL iron-transfer P-loop NTPase PA257_4340 PF00448 SRP54-type protein, GTPase domain PA257_4341 PF00771 FHIPEP family PA257_4342 PF04536 TPM domain PA257_4344 PF01312 FlhB HrpN YscU SpaS Family PA257_4345 PF01311 Bacterial export proteins, family 1 PA257_4346 PF01313 Bacterial export proteins, family 3 PA257_4347 PF00813 FliP family PA257_4348 PF04347 Flagellar biosynthesis protein, FliO PA257_4349 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PA257_4350 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PA257_4350 PF02154 Flagellar motor switch protein FliM PA257_4354 PF04304 Protein of unknown function (DUF454) PA257_4355 PF00512 His Kinase A (phospho-acceptor) domain PA257_4355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_4355 PF00672 HAMP domain PA257_4356 PF00072 Response regulator receiver domain PA257_4356 PF00486 Transcriptional regulatory protein, C terminal PA257_4357 PF00873 AcrB/AcrD/AcrF family PA257_4358 PF13533 Biotin-lipoyl like PA257_4360 PF00563 EAL domain PA257_4360 PF13188 PAS domain PA257_4360 PF03707 Bacterial signalling protein N terminal repeat PA257_4360 PF00990 Diguanylate cyclase, GGDEF domain PA257_4361 PF00765 Autoinducer synthase PA257_4363 PF03472 Autoinducer binding domain PA257_4363 PF00196 Bacterial regulatory proteins, luxR family PA257_4365 PF00689 Cation transporting ATPase, C-terminus PA257_4365 PF00690 Cation transporter/ATPase, N-terminus PA257_4366 PF13673 Acetyltransferase (GNAT) domain PA257_4371 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_4371 PF08447 PAS fold PA257_4371 PF13426 PAS domain PA257_4372 PF03466 LysR substrate binding domain PA257_4372 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4373 PF00491 Arginase family PA257_4376 PF00474 Sodium:solute symporter family PA257_4377 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PA257_4377 PF00205 Thiamine pyrophosphate enzyme, central domain PA257_4377 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PA257_4378 PF01565 FAD binding domain PA257_4378 PF02913 FAD linked oxidases, C-terminal domain PA257_4381 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4381 PF03466 LysR substrate binding domain PA257_4383 PF00892 EamA-like transporter family PA257_4384 PF13416 Bacterial extracellular solute-binding protein PA257_4385 PF00850 Histone deacetylase domain PA257_4387 PF12794 Mechanosensitive ion channel inner membrane domain 1 PA257_4387 PF12795 Mechanosensitive ion channel porin domain PA257_4387 PF00924 Mechanosensitive ion channel PA257_4388 PF10672 S-adenosylmethionine-dependent methyltransferase PA257_4388 PF01170 Putative RNA methylase family UPF0020 PA257_4388 PF02926 THUMP domain PA257_4390 PF13361 UvrD-like helicase C-terminal domain PA257_4390 PF12462 DNA helicase IV / RNA helicase N terminal PA257_4390 PF00580 UvrD/REP helicase N-terminal domain PA257_4392 PF00440 Bacterial regulatory proteins, tetR family PA257_4395 PF00364 Biotin-requiring enzyme PA257_4395 PF00682 HMGL-like PA257_4395 PF00289 Biotin carboxylase, N-terminal domain PA257_4395 PF02436 Conserved carboxylase domain PA257_4395 PF02785 Biotin carboxylase C-terminal domain PA257_4395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PA257_4396 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4396 PF03466 LysR substrate binding domain PA257_4398 PF00072 Response regulator receiver domain PA257_4398 PF00196 Bacterial regulatory proteins, luxR family PA257_4399 PF00512 His Kinase A (phospho-acceptor) domain PA257_4399 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_4399 PF01627 Hpt domain PA257_4399 PF00072 Response regulator receiver domain PA257_4405 PF00534 Glycosyl transferases group 1 PA257_4405 PF13439 Glycosyltransferase Family 4 PA257_4406 PF00535 Glycosyl transferase family 2 PA257_4407 PF00534 Glycosyl transferases group 1 PA257_4410 PF00005 ABC transporter PA257_4414 PF00263 Bacterial type II and III secretion system protein PA257_4414 PF03958 Bacterial type II/III secretion system short domain PA257_4416 PF06719 AraC-type transcriptional regulator N-terminus PA257_4416 PF12833 Helix-turn-helix domain PA257_4417 PF00106 short chain dehydrogenase PA257_4419 PF00583 Acetyltransferase (GNAT) family PA257_4420 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) PA257_4421 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PA257_4421 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PA257_4421 PF11890 Domain of unknown function (DUF3410) PA257_4422 PF01638 HxlR-like helix-turn-helix PA257_4423 PF02801 Beta-ketoacyl synthase, C-terminal domain PA257_4423 PF00109 Beta-ketoacyl synthase, N-terminal domain PA257_4425 PF02567 Phenazine biosynthesis-like protein PA257_4426 PF07715 TonB-dependent Receptor Plug Domain PA257_4426 PF00593 TonB dependent receptor PA257_4430 PF01554 MatE PA257_4431 PF00892 EamA-like transporter family PA257_4434 PF04073 Aminoacyl-tRNA editing domain PA257_4437 PF03795 YCII-related domain PA257_4440 PF07690 Major Facilitator Superfamily PA257_4441 PF08281 Sigma-70, region 4 PA257_4441 PF04542 Sigma-70 region 2 PA257_4444 PF03795 YCII-related domain PA257_4446 PF00196 Bacterial regulatory proteins, luxR family PA257_4446 PF00072 Response regulator receiver domain PA257_4447 PF01276 Orn/Lys/Arg decarboxylase, major domain PA257_4447 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain PA257_4447 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain PA257_4448 PF02951 Prokaryotic glutathione synthetase, N-terminal domain PA257_4448 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain PA257_4449 PF00106 short chain dehydrogenase PA257_4451 PF00497 Bacterial extracellular solute-binding proteins, family 3 PA257_4452 PF00528 Binding-protein-dependent transport system inner membrane component PA257_4453 PF00528 Binding-protein-dependent transport system inner membrane component PA257_4454 PF00005 ABC transporter PA257_4456 PF17763 Glutaminase/Asparaginase C-terminal domain PA257_4456 PF00710 Asparaginase, N-terminal PA257_4457 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_4457 PF00512 His Kinase A (phospho-acceptor) domain PA257_4457 PF02743 Cache domain PA257_4458 PF00072 Response regulator receiver domain PA257_4458 PF02954 Bacterial regulatory protein, Fis family PA257_4458 PF00158 Sigma-54 interaction domain PA257_4460 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PA257_4464 PF03741 Integral membrane protein TerC family PA257_4464 PF03471 Transporter associated domain PA257_4464 PF00571 CBS domain PA257_4465 PF00106 short chain dehydrogenase PA257_4467 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4467 PF03466 LysR substrate binding domain PA257_4468 PF01223 DNA/RNA non-specific endonuclease PA257_4469 PF00585 C-terminal regulatory domain of Threonine dehydratase PA257_4469 PF00291 Pyridoxal-phosphate dependent enzyme PA257_4470 PF13474 SnoaL-like domain PA257_4473 PF07715 TonB-dependent Receptor Plug Domain PA257_4473 PF00593 TonB dependent receptor PA257_4474 PF01040 UbiA prenyltransferase family PA257_4475 PF03626 Prokaryotic Cytochrome C oxidase subunit IV PA257_4476 PF00510 Cytochrome c oxidase subunit III PA257_4477 PF00115 Cytochrome C and Quinol oxidase polypeptide I PA257_4478 PF06481 COX Aromatic Rich Motif PA257_4478 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PA257_4480 PF07690 Major Facilitator Superfamily PA257_4481 PF08361 MAATS-type transcriptional repressor, C-terminal region PA257_4481 PF00440 Bacterial regulatory proteins, tetR family PA257_4484 PF07690 Major Facilitator Superfamily PA257_4485 PF03466 LysR substrate binding domain PA257_4485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4487 PF00266 Aminotransferase class-V PA257_4488 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4488 PF03466 LysR substrate binding domain PA257_4490 PF13230 Glutamine amidotransferases class-II PA257_4493 PF00326 Prolyl oligopeptidase family PA257_4493 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain PA257_4494 PF10502 Signal peptidase, peptidase S26 PA257_4495 PF07715 TonB-dependent Receptor Plug Domain PA257_4495 PF00593 TonB dependent receptor PA257_4496 PF04773 FecR protein PA257_4496 PF16220 Domain of unknown function (DUF4880) PA257_4497 PF08281 Sigma-70, region 4 PA257_4497 PF04542 Sigma-70 region 2 PA257_4498 PF03692 Putative zinc- or iron-chelating domain PA257_4499 PF02583 Metal-sensitive transcriptional repressor PA257_4500 PF01545 Cation efflux family PA257_4501 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PA257_4502 PF05166 YcgL domain PA257_4503 PF01612 3'-5' exonuclease PA257_4503 PF00570 HRDC domain PA257_4506 PF00581 Rhodanese-like domain PA257_4508 PF00440 Bacterial regulatory proteins, tetR family PA257_4510 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) PA257_4511 PF00255 Glutathione peroxidase PA257_4514 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_4514 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_4514 PF12806 Acetyl-CoA dehydrogenase C-terminal like PA257_4514 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_4516 PF07690 Major Facilitator Superfamily PA257_4517 PF02654 Cobalamin-5-phosphate synthase PA257_4518 PF00300 Histidine phosphatase superfamily (branch 1) PA257_4519 PF02277 Phosphoribosyltransferase PA257_4520 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase PA257_4521 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PA257_4521 PF07685 CobB/CobQ-like glutamine amidotransferase domain PA257_4522 PF00155 Aminotransferase class I and II PA257_4523 PF03186 CobD/Cbib protein PA257_4523 PF17113 Regulatory signalling modulator protein AmpE PA257_4524 PF00881 Nitroreductase family PA257_4525 PF07685 CobB/CobQ-like glutamine amidotransferase domain PA257_4525 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PA257_4526 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP PA257_4526 PF12557 Cob(I)alamin adenosyltransferase N terminal PA257_4527 PF00593 TonB dependent receptor PA257_4527 PF07715 TonB-dependent Receptor Plug Domain PA257_4529 PF00392 Bacterial regulatory proteins, gntR family PA257_4529 PF07729 FCD domain PA257_4530 PF05544 Proline racemase PA257_4531 PF01266 FAD dependent oxidoreductase PA257_4533 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_4533 PF04324 BFD-like [2Fe-2S] binding domain PA257_4535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4535 PF03466 LysR substrate binding domain PA257_4537 PF07690 Major Facilitator Superfamily PA257_4539 PF00497 Bacterial extracellular solute-binding proteins, family 3 PA257_4541 PF00528 Binding-protein-dependent transport system inner membrane component PA257_4543 PF00005 ABC transporter PA257_4544 PF05544 Proline racemase PA257_4545 PF00701 Dihydrodipicolinate synthetase family PA257_4546 PF00171 Aldehyde dehydrogenase family PA257_4547 PF02615 Malate/L-lactate dehydrogenase PA257_4548 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_4548 PF00672 HAMP domain PA257_4548 PF12729 Four helix bundle sensory module for signal transduction PA257_4549 PF02974 Protease inhibitor Inh PA257_4550 PF08548 Peptidase M10 serralysin C terminal PA257_4550 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) PA257_4552 PF02321 Outer membrane efflux protein PA257_4553 PF00529 HlyD membrane-fusion protein of T1SS PA257_4554 PF00664 ABC transporter transmembrane region PA257_4554 PF00005 ABC transporter PA257_4557 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_4557 PF13426 PAS domain PA257_4557 PF00072 Response regulator receiver domain PA257_4560 PF00378 Enoyl-CoA hydratase/isomerase PA257_4563 PF02321 Outer membrane efflux protein PA257_4564 PF13533 Biotin-lipoyl like PA257_4565 PF07690 Major Facilitator Superfamily PA257_4566 PF12833 Helix-turn-helix domain PA257_4566 PF02311 AraC-like ligand binding domain PA257_4569 PF04632 Fusaric acid resistance protein family PA257_4570 PF13533 Biotin-lipoyl like PA257_4572 PF12833 Helix-turn-helix domain PA257_4572 PF02311 AraC-like ligand binding domain PA257_4576 PF02525 Flavodoxin-like fold PA257_4577 PF04371 Porphyromonas-type peptidyl-arginine deiminase PA257_4578 PF13416 Bacterial extracellular solute-binding protein PA257_4579 PF00795 Carbon-nitrogen hydrolase PA257_4580 PF04371 Porphyromonas-type peptidyl-arginine deiminase PA257_4582 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4582 PF03466 LysR substrate binding domain PA257_4584 PF06725 3D domain PA257_4584 PF03562 MltA specific insert domain PA257_4585 PF00550 Phosphopantetheine attachment site PA257_4585 PF00668 Condensation domain PA257_4585 PF00501 AMP-binding enzyme PA257_4585 PF13193 AMP-binding enzyme C-terminal domain PA257_4589 PF00682 HMGL-like PA257_4591 PF00501 AMP-binding enzyme PA257_4591 PF13193 AMP-binding enzyme C-terminal domain PA257_4592 PF00733 Asparagine synthase PA257_4592 PF13537 Glutamine amidotransferase domain PA257_4594 PF07690 Major Facilitator Superfamily PA257_4596 PF17954 Quercetinase C-terminal cupin domain PA257_4596 PF02678 Pirin PA257_4598 PF00743 Flavin-binding monooxygenase-like PA257_4599 PF00999 Sodium/hydrogen exchanger family PA257_4599 PF02254 TrkA-N domain PA257_4601 PF02678 Pirin PA257_4601 PF05726 Pirin C-terminal cupin domain PA257_4602 PF03358 NADPH-dependent FMN reductase PA257_4604 PF00857 Isochorismatase family PA257_4605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4605 PF03466 LysR substrate binding domain PA257_4606 PF01596 O-methyltransferase PA257_4607 PF00877 NlpC/P60 family PA257_4608 PF00877 NlpC/P60 family PA257_4609 PF02146 Sir2 family PA257_4610 PF00158 Sigma-54 interaction domain PA257_4610 PF13426 PAS domain PA257_4610 PF02954 Bacterial regulatory protein, Fis family PA257_4612 PF13520 Amino acid permease PA257_4613 PF03352 Methyladenine glycosylase PA257_4614 PF01171 PP-loop family PA257_4616 PF04893 Yip1 domain PA257_4617 PF17283 SprT-like zinc ribbon domain PA257_4617 PF10263 SprT-like family PA257_4618 PF02515 CoA-transferase family III PA257_4619 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_4619 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_4619 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_4620 PF00296 Luciferase-like monooxygenase PA257_4621 PF00043 Glutathione S-transferase, C-terminal domain PA257_4621 PF02798 Glutathione S-transferase, N-terminal domain PA257_4622 PF03466 LysR substrate binding domain PA257_4622 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4623 PF00375 Sodium:dicarboxylate symporter family PA257_4626 PF00563 EAL domain PA257_4626 PF13426 PAS domain PA257_4626 PF05231 MASE1 PA257_4626 PF00990 Diguanylate cyclase, GGDEF domain PA257_4626 PF08447 PAS fold PA257_4626 PF08448 PAS fold PA257_4627 PF08918 PhoQ Sensor PA257_4627 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_4628 PF00072 Response regulator receiver domain PA257_4628 PF00486 Transcriptional regulatory protein, C terminal PA257_4630 PF06796 Periplasmic nitrate reductase protein NapE PA257_4631 PF00037 4Fe-4S binding domain PA257_4631 PF13187 4Fe-4S dicluster domain PA257_4631 PF12800 4Fe-4S binding domain PA257_4632 PF03927 NapD protein PA257_4633 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PA257_4633 PF01568 Molydopterin dinucleotide binding domain PA257_4633 PF00384 Molybdopterin oxidoreductase PA257_4634 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) PA257_4635 PF03264 NapC/NirT cytochrome c family, N-terminal region PA257_4636 PF13406 Transglycosylase SLT domain PA257_4637 PF03741 Integral membrane protein TerC family PA257_4638 PF00305 Lipoxygenase PA257_4641 PF01738 Dienelactone hydrolase family PA257_4642 PF17837 4'-phosphopantetheinyl transferase N-terminal domain PA257_4642 PF01648 4'-phosphopantetheinyl transferase superfamily PA257_4643 PF00899 ThiF family PA257_4645 PF07687 Peptidase dimerisation domain PA257_4645 PF01546 Peptidase family M20/M25/M40 PA257_4646 PF13847 Methyltransferase domain PA257_4648 PF00313 'Cold-shock' DNA-binding domain PA257_4649 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_4649 PF00512 His Kinase A (phospho-acceptor) domain PA257_4649 PF00672 HAMP domain PA257_4650 PF00486 Transcriptional regulatory protein, C terminal PA257_4650 PF00072 Response regulator receiver domain PA257_4652 PF02867 Ribonucleotide reductase, barrel domain PA257_4652 PF00317 Ribonucleotide reductase, all-alpha domain PA257_4652 PF03477 ATP cone domain PA257_4653 PF00268 Ribonucleotide reductase, small chain PA257_4657 PF06958 S-type Pyocin PA257_4657 PF06958 S-type Pyocin PA257_4660 PF09101 Exotoxin A binding PA257_4660 PF09009 Exotoxin A catalytic PA257_4660 PF09102 Exotoxin A, targeting PA257_4661 PF13520 Amino acid permease PA257_4662 PF00465 Iron-containing alcohol dehydrogenase PA257_4663 PF03466 LysR substrate binding domain PA257_4663 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4667 PF07702 UTRA domain PA257_4667 PF00392 Bacterial regulatory proteins, gntR family PA257_4668 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4668 PF03466 LysR substrate binding domain PA257_4669 PF05899 Protein of unknown function (DUF861) PA257_4669 PF07883 Cupin domain PA257_4672 PF00698 Acyl transferase domain PA257_4672 PF00109 Beta-ketoacyl synthase, N-terminal domain PA257_4672 PF02801 Beta-ketoacyl synthase, C-terminal domain PA257_4672 PF14765 Polyketide synthase dehydratase PA257_4672 PF08659 KR domain PA257_4672 PF00550 Phosphopantetheine attachment site PA257_4672 PF08240 Alcohol dehydrogenase GroES-like domain PA257_4672 PF16197 Ketoacyl-synthetase C-terminal extension PA257_4673 PF03472 Autoinducer binding domain PA257_4673 PF00196 Bacterial regulatory proteins, luxR family PA257_4674 PF01965 DJ-1/PfpI family PA257_4678 PF07690 Major Facilitator Superfamily PA257_4680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PA257_4681 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4681 PF03466 LysR substrate binding domain PA257_4682 PF00248 Aldo/keto reductase family PA257_4684 PF02146 Sir2 family PA257_4685 PF01966 HD domain PA257_4685 PF13286 Phosphohydrolase-associated domain PA257_4689 PF01327 Polypeptide deformylase PA257_4690 PF13689 YfiR/HmsC-like PA257_4691 PF00990 Diguanylate cyclase, GGDEF domain PA257_4691 PF17152 Periplasmic sensor domain PA257_4692 PF00691 OmpA family PA257_4695 PF17783 CvfB-like winged helix domain PA257_4695 PF13509 S1 domain PA257_4698 PF00664 ABC transporter transmembrane region PA257_4698 PF00005 ABC transporter PA257_4701 PF09905 DNA-binding protein VF530 PA257_4702 PF07995 Glucose / Sorbosone dehydrogenase PA257_4705 PF12833 Helix-turn-helix domain PA257_4705 PF02311 AraC-like ligand binding domain PA257_4706 PF07690 Major Facilitator Superfamily PA257_4707 PF00990 Diguanylate cyclase, GGDEF domain PA257_4707 PF17151 Periplasmic sensor domain PA257_4709 PF02050 Flagellar FliJ protein PA257_4710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PA257_4710 PF18269 T3SS EscN ATPase C-terminal domain PA257_4712 PF14842 FliG N-terminal domain PA257_4712 PF14841 FliG middle domain PA257_4712 PF01706 FliG C-terminal domain PA257_4713 PF08345 Flagellar M-ring protein C-terminal PA257_4713 PF01514 Secretory protein of YscJ/FliF family PA257_4714 PF02049 Flagellar hook-basal body complex protein FliE PA257_4715 PF00072 Response regulator receiver domain PA257_4715 PF00158 Sigma-54 interaction domain PA257_4715 PF02954 Bacterial regulatory protein, Fis family PA257_4716 PF00989 PAS fold PA257_4716 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_4716 PF00512 His Kinase A (phospho-acceptor) domain PA257_4717 PF00158 Sigma-54 interaction domain PA257_4717 PF00072 Response regulator receiver domain PA257_4717 PF02954 Bacterial regulatory protein, Fis family PA257_4719 PF02561 Flagellar protein FliS PA257_4720 PF02561 Flagellar protein FliS PA257_4721 PF02465 Flagellar hook-associated protein 2 N-terminus PA257_4721 PF07195 Flagellar hook-associated protein 2 C-terminus PA257_4721 PF07196 Flagellin hook IN motif PA257_4723 PF00700 Bacterial flagellin C-terminal helical region PA257_4723 PF00669 Bacterial flagellin N-terminal helical region PA257_4724 PF00535 Glycosyl transferase family 2 PA257_4730 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PA257_4730 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PA257_4732 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PA257_4733 PF00669 Bacterial flagellin N-terminal helical region PA257_4734 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PA257_4734 PF00460 Flagella basal body rod protein PA257_4735 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase PA257_4735 PF10135 Rod binding protein PA257_4736 PF02119 Flagellar P-ring protein PA257_4737 PF02107 Flagellar L-ring protein PA257_4738 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PA257_4738 PF00460 Flagella basal body rod protein PA257_4739 PF00460 Flagella basal body rod protein PA257_4739 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PA257_4740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PA257_4740 PF00460 Flagella basal body rod protein PA257_4740 PF07559 Flagellar basal body protein FlaE PA257_4741 PF13860 FlgD Ig-like domain PA257_4741 PF13861 FlgD Tudor-like domain PA257_4741 PF03963 Flagellar hook capping protein - N-terminal region PA257_4742 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PA257_4742 PF00460 Flagella basal body rod protein PA257_4743 PF00460 Flagella basal body rod protein PA257_4747 PF13458 Periplasmic binding protein PA257_4748 PF02653 Branched-chain amino acid transport system / permease component PA257_4749 PF11862 Domain of unknown function (DUF3382) PA257_4749 PF02653 Branched-chain amino acid transport system / permease component PA257_4750 PF00005 ABC transporter PA257_4750 PF12399 Branched-chain amino acid ATP-binding cassette transporter PA257_4751 PF00005 ABC transporter PA257_4753 PF00183 Hsp90 protein PA257_4753 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_4754 PF03466 LysR substrate binding domain PA257_4754 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4756 PF04343 Protein of unknown function, DUF488 PA257_4760 PF00291 Pyridoxal-phosphate dependent enzyme PA257_4763 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) PA257_4765 PF00361 Proton-conducting membrane transporter PA257_4766 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PA257_4767 PF13244 Domain of unknown function (DUF4040) PA257_4767 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PA257_4767 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter PA257_4767 PF00361 Proton-conducting membrane transporter PA257_4768 PF05433 Glycine zipper 2TM domain PA257_4770 PF02595 Glycerate kinase family PA257_4771 PF02447 GntP family permease PA257_4772 PF05651 Putative sugar diacid recognition PA257_4772 PF17853 GGDEF-like domain PA257_4772 PF13556 PucR C-terminal helix-turn-helix domain PA257_4773 PF01243 Pyridoxamine 5'-phosphate oxidase PA257_4773 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PA257_4774 PF00691 OmpA family PA257_4774 PF00223 Photosystem I psaA/psaB protein PA257_4775 PF00144 Beta-lactamase PA257_4776 PF17992 Agarase CBM like domain PA257_4776 PF02449 Beta-galactosidase PA257_4777 PF06733 DEAD_2 PA257_4777 PF13307 Helicase C-terminal domain PA257_4781 PF05736 OprF membrane domain PA257_4781 PF00691 OmpA family PA257_4783 PF02810 SEC-C motif PA257_4785 PF03458 UPF0126 domain PA257_4788 PF02810 SEC-C motif PA257_4788 PF07517 SecA DEAD-like domain PA257_4788 PF07516 SecA Wing and Scaffold domain PA257_4788 PF01043 SecA preprotein cross-linking domain PA257_4789 PF00043 Glutathione S-transferase, C-terminal domain PA257_4789 PF02798 Glutathione S-transferase, N-terminal domain PA257_4790 PF01804 Penicillin amidase PA257_4791 PF02646 RmuC family PA257_4794 PF01266 FAD dependent oxidoreductase PA257_4795 PF00171 Aldehyde dehydrogenase family PA257_4798 PF03573 outer membrane porin, OprD family PA257_4799 PF03060 Nitronate monooxygenase PA257_4800 PF00106 short chain dehydrogenase PA257_4801 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_4801 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_4801 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_4802 PF00378 Enoyl-CoA hydratase/isomerase PA257_4803 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_4803 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_4803 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_4805 PF07690 Major Facilitator Superfamily PA257_4806 PF13452 N-terminal half of MaoC dehydratase PA257_4808 PF00108 Thiolase, N-terminal domain PA257_4808 PF02803 Thiolase, C-terminal domain PA257_4811 PF00535 Glycosyl transferase family 2 PA257_4813 PF01259 SAICAR synthetase PA257_4814 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PA257_4814 PF00753 Metallo-beta-lactamase superfamily PA257_4814 PF10996 Beta-Casp domain PA257_4815 PF06804 NlpB/DapX lipoprotein PA257_4816 PF00701 Dihydrodipicolinate synthetase family PA257_4818 PF00578 AhpC/TSA family PA257_4819 PF01594 AI-2E family transporter PA257_4820 PF01206 Sulfurtransferase TusA PA257_4821 PF01435 Peptidase family M48 PA257_4822 PF02445 Quinolinate synthetase A protein PA257_4823 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4823 PF03466 LysR substrate binding domain PA257_4824 PF00117 Glutamine amidotransferase class-I PA257_4825 PF04715 Anthranilate synthase component I, N terminal region PA257_4825 PF00425 chorismate binding enzyme PA257_4826 PF00753 Metallo-beta-lactamase superfamily PA257_4827 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PA257_4827 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PA257_4828 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PA257_4828 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PA257_4830 PF13193 AMP-binding enzyme C-terminal domain PA257_4830 PF00501 AMP-binding enzyme PA257_4831 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PA257_4831 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PA257_4832 PF13954 PapC N-terminal domain PA257_4832 PF00577 Outer membrane usher protein PA257_4832 PF13953 PapC C-terminal domain PA257_4833 PF02753 Pili assembly chaperone PapD, C-terminal domain PA257_4833 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain PA257_4834 PF00419 Fimbrial protein PA257_4836 PF00293 NUDIX domain PA257_4836 PF09297 NADH pyrophosphatase zinc ribbon domain PA257_4836 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain PA257_4840 PF13683 Integrase core domain PA257_4840 PF13276 HTH-like domain PA257_4841 PF03050 Transposase IS66 family PA257_4841 PF13817 IS66 C-terminal element PA257_4841 PF13007 Transposase C of IS166 homeodomain PA257_4841 PF13005 zinc-finger binding domain of transposase IS66 PA257_4844 PF00665 Integrase core domain PA257_4845 PF01527 Transposase PA257_4847 PF02254 TrkA-N domain PA257_4847 PF00999 Sodium/hydrogen exchanger family PA257_4851 PF00171 Aldehyde dehydrogenase family PA257_4852 PF00596 Class II Aldolase and Adducin N-terminal domain PA257_4853 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4853 PF03466 LysR substrate binding domain PA257_4854 PF05199 GMC oxidoreductase PA257_4854 PF00732 GMC oxidoreductase PA257_4855 PF00753 Metallo-beta-lactamase superfamily PA257_4856 PF07883 Cupin domain PA257_4857 PF01494 FAD binding domain PA257_4859 PF00589 Phage integrase family PA257_4861 PF06508 Queuosine biosynthesis protein QueC PA257_4862 PF04055 Radical SAM superfamily PA257_4863 PF16331 TolA binding protein trimerisation PA257_4863 PF13525 Outer membrane lipoprotein PA257_4864 PF00691 OmpA family PA257_4865 PF04052 TolB amino-terminal domain PA257_4865 PF07676 WD40-like Beta Propeller Repeat PA257_4867 PF02472 Biopolymer transport protein ExbD/TolR PA257_4868 PF01618 MotA/TolQ/ExbB proton channel family PA257_4869 PF03061 Thioesterase superfamily PA257_4870 PF17864 RuvB AAA lid domain PA257_4870 PF05491 RuvB C-terminal winged helix domain PA257_4870 PF05496 Holliday junction DNA helicase RuvB P-loop domain PA257_4871 PF01330 RuvA N terminal domain PA257_4871 PF07499 RuvA, C-terminal domain PA257_4872 PF02075 Crossover junction endodeoxyribonuclease RuvC PA257_4873 PF01709 Transcriptional regulator PA257_4874 PF01336 OB-fold nucleic acid binding domain PA257_4874 PF00152 tRNA synthetases class II (D, K and N) PA257_4874 PF02938 GAD domain PA257_4875 PF00210 Ferritin-like domain PA257_4876 PF00313 'Cold-shock' DNA-binding domain PA257_4877 PF04102 SlyX PA257_4879 PF03573 outer membrane porin, OprD family PA257_4880 PF03573 outer membrane porin, OprD family PA257_4882 PF04073 Aminoacyl-tRNA editing domain PA257_4882 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PA257_4882 PF03129 Anticodon binding domain PA257_4884 PF00708 Acylphosphatase PA257_4885 PF00085 Thioredoxin PA257_4888 PF03631 Virulence factor BrkB PA257_4889 PF03960 ArsC family PA257_4890 PF03358 NADPH-dependent FMN reductase PA257_4892 PF00308 Bacterial dnaA protein PA257_4894 PF00586 AIR synthase related protein, N-terminal domain PA257_4894 PF02769 AIR synthase related protein, C-terminal domain PA257_4895 PF00551 Formyl transferase PA257_4903 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) PA257_4905 PF03819 MazG nucleotide pyrophosphohydrolase domain PA257_4906 PF13291 ACT domain PA257_4906 PF04607 Region found in RelA / SpoT proteins PA257_4906 PF02824 TGS domain PA257_4907 PF05958 tRNA (Uracil-5-)-methyltransferase PA257_4908 PF00291 Pyridoxal-phosphate dependent enzyme PA257_4909 PF00593 TonB dependent receptor PA257_4909 PF07715 TonB-dependent Receptor Plug Domain PA257_4910 PF00512 His Kinase A (phospho-acceptor) domain PA257_4910 PF00672 HAMP domain PA257_4910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_4910 PF16750 Sensor domain of 2-component histidine kinase PA257_4911 PF00486 Transcriptional regulatory protein, C terminal PA257_4911 PF00072 Response regulator receiver domain PA257_4912 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PA257_4912 PF00672 HAMP domain PA257_4912 PF00072 Response regulator receiver domain PA257_4912 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_4912 PF00512 His Kinase A (phospho-acceptor) domain PA257_4912 PF01627 Hpt domain PA257_4913 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PA257_4913 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PA257_4916 PF11893 Domain of unknown function (DUF3413) PA257_4916 PF00884 Sulfatase PA257_4917 PF11798 IMS family HHH motif PA257_4917 PF00817 impB/mucB/samB family PA257_4917 PF11799 impB/mucB/samB family C-terminal domain PA257_4921 PF03706 Lysylphosphatidylglycerol synthase TM region PA257_4921 PF09924 Uncharacterised conserved protein (DUF2156) PA257_4923 PF01292 Prokaryotic cytochrome b561 PA257_4924 PF02705 K+ potassium transporter PA257_4926 PF00919 Uncharacterized protein family UPF0004 PA257_4926 PF18693 TRAM domain PA257_4926 PF04055 Radical SAM superfamily PA257_4927 PF07308 Protein of unknown function (DUF1456) PA257_4929 PF01769 Divalent cation transporter PA257_4929 PF03448 MgtE intracellular N domain PA257_4929 PF00571 CBS domain PA257_4936 PF01381 Helix-turn-helix PA257_4936 PF00717 Peptidase S24-like PA257_4940 PF02599 Global regulator protein family PA257_4941 PF01842 ACT domain PA257_4941 PF00696 Amino acid kinase family PA257_4941 PF13840 ACT domain PA257_4942 PF02272 DHHA1 domain PA257_4942 PF01411 tRNA synthetases class II (A) PA257_4942 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PA257_4943 PF01212 Beta-eliminating lyase PA257_4944 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family PA257_4946 PF04996 Succinylarginine dihydrolase PA257_4947 PF00171 Aldehyde dehydrogenase family PA257_4948 PF04958 Arginine N-succinyltransferase beta subunit PA257_4949 PF04958 Arginine N-succinyltransferase beta subunit PA257_4950 PF00202 Aminotransferase class-III PA257_4952 PF12833 Helix-turn-helix domain PA257_4953 PF00005 ABC transporter PA257_4955 PF00528 Binding-protein-dependent transport system inner membrane component PA257_4956 PF00528 Binding-protein-dependent transport system inner membrane component PA257_4957 PF00497 Bacterial extracellular solute-binding proteins, family 3 PA257_4958 PF13193 AMP-binding enzyme C-terminal domain PA257_4958 PF00501 AMP-binding enzyme PA257_4958 PF16177 Acetyl-coenzyme A synthetase N-terminus PA257_4959 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PA257_4960 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PA257_4961 PF03480 Bacterial extracellular solute-binding protein, family 7 PA257_4962 PF03328 HpcH/HpaI aldolase/citrate lyase family PA257_4963 PF02515 CoA-transferase family III PA257_4964 PF03972 MmgE/PrpD family PA257_4965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PA257_4966 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_4966 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_4966 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_4968 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4968 PF03466 LysR substrate binding domain PA257_4969 PF03466 LysR substrate binding domain PA257_4969 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_4970 PF04632 Fusaric acid resistance protein family PA257_4974 PF00158 Sigma-54 interaction domain PA257_4974 PF18024 Helix-turn-helix domain PA257_4975 PF00351 Biopterin-dependent aromatic amino acid hydroxylase PA257_4976 PF01329 Pterin 4 alpha carbinolamine dehydratase PA257_4977 PF00155 Aminotransferase class I and II PA257_4978 PF00768 D-alanyl-D-alanine carboxypeptidase PA257_4979 PF00472 RF-1 domain PA257_4980 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme PA257_4981 PF00324 Amino acid permease PA257_4982 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PA257_4986 PF00698 Acyl transferase domain PA257_4986 PF16197 Ketoacyl-synthetase C-terminal extension PA257_4986 PF08240 Alcohol dehydrogenase GroES-like domain PA257_4986 PF00107 Zinc-binding dehydrogenase PA257_4986 PF00109 Beta-ketoacyl synthase, N-terminal domain PA257_4986 PF02801 Beta-ketoacyl synthase, C-terminal domain PA257_4986 PF08659 KR domain PA257_4986 PF14765 Polyketide synthase dehydratase PA257_4986 PF00550 Phosphopantetheine attachment site PA257_4988 PF00563 EAL domain PA257_4988 PF08448 PAS fold PA257_4988 PF00990 Diguanylate cyclase, GGDEF domain PA257_4989 PF00664 ABC transporter transmembrane region PA257_4989 PF00005 ABC transporter PA257_4992 PF01722 BolA-like protein PA257_4995 PF10415 Fumarase C C-terminus PA257_4995 PF00206 Lyase PA257_4997 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading PA257_4997 PF18416 N-acetylglucosamine binding protein domain 2 PA257_4998 PF00291 Pyridoxal-phosphate dependent enzyme PA257_5000 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_5001 PF10417 C-terminal domain of 1-Cys peroxiredoxin PA257_5001 PF00578 AhpC/TSA family PA257_5002 PF00563 EAL domain PA257_5002 PF00990 Diguanylate cyclase, GGDEF domain PA257_5002 PF03707 Bacterial signalling protein N terminal repeat PA257_5004 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal PA257_5004 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal PA257_5006 PF04185 Phosphoesterase family PA257_5006 PF05506 Domain of unknown function (DUF756) PA257_5008 PF13439 Glycosyltransferase Family 4 PA257_5008 PF00534 Glycosyl transferases group 1 PA257_5009 PF02645 Uncharacterised protein, DegV family COG1307 PA257_5010 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_5010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PA257_5011 PF00440 Bacterial regulatory proteins, tetR family PA257_5011 PF16925 Tetracyclin repressor-like, C-terminal domain PA257_5012 PF00255 Glutathione peroxidase PA257_5013 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PA257_5015 PF00871 Acetokinase family PA257_5016 PF07085 DRTGG domain PA257_5016 PF01515 Phosphate acetyl/butaryl transferase PA257_5017 PF01553 Acyltransferase PA257_5018 PF13488 Glycine zipper PA257_5018 PF00691 OmpA family PA257_5019 PF00753 Metallo-beta-lactamase superfamily PA257_5020 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PA257_5020 PF12833 Helix-turn-helix domain PA257_5022 PF00561 alpha/beta hydrolase fold PA257_5023 PF00440 Bacterial regulatory proteins, tetR family PA257_5023 PF08361 MAATS-type transcriptional repressor, C-terminal region PA257_5041 PF04860 Phage portal protein PA257_5049 PF00182 Chitinase class I PA257_5051 PF09669 Phage regulatory protein Rha (Phage_pRha) PA257_5051 PF10549 ORF11CD3 domain PA257_5054 PF00772 DnaB-like helicase N terminal domain PA257_5054 PF03796 DnaB-like helicase C terminal domain PA257_5065 PF01381 Helix-turn-helix PA257_5065 PF00717 Peptidase S24-like PA257_5067 PF12441 CopG antitoxin of type II toxin-antitoxin system PA257_5068 PF00072 Response regulator receiver domain PA257_5068 PF00196 Bacterial regulatory proteins, luxR family PA257_5078 PF00589 Phage integrase family PA257_5078 PF12167 Arm DNA-binding domain PA257_5086 PF00665 Integrase core domain PA257_5087 PF01527 Transposase PA257_5090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_5090 PF03466 LysR substrate binding domain PA257_5091 PF03466 LysR substrate binding domain PA257_5091 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_5093 PF00266 Aminotransferase class-V PA257_5096 PF13419 Haloacid dehalogenase-like hydrolase PA257_5097 PF01566 Natural resistance-associated macrophage protein PA257_5099 PF01510 N-acetylmuramoyl-L-alanine amidase PA257_5102 PF00248 Aldo/keto reductase family PA257_5107 PF00271 Helicase conserved C-terminal domain PA257_5107 PF00176 SNF2 family N-terminal domain PA257_5107 PF12419 SNF2 Helicase protein PA257_5108 PF08241 Methyltransferase domain PA257_5109 PF07729 FCD domain PA257_5109 PF00392 Bacterial regulatory proteins, gntR family PA257_5111 PF00285 Citrate synthase, C-terminal domain PA257_5112 PF00694 Aconitase C-terminal domain PA257_5112 PF00330 Aconitase family (aconitate hydratase) PA257_5113 PF04303 PrpF protein PA257_5114 PF03972 MmgE/PrpD family PA257_5117 PF00324 Amino acid permease PA257_5122 PF00893 Small Multidrug Resistance protein PA257_5123 PF02525 Flavodoxin-like fold PA257_5124 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_5124 PF03466 LysR substrate binding domain PA257_5125 PF00474 Sodium:solute symporter family PA257_5126 PF00171 Aldehyde dehydrogenase family PA257_5126 PF18327 Proline utilization A proline dehydrogenase N-terminal domain PA257_5126 PF14850 DNA-binding domain of Proline dehydrogenase PA257_5126 PF01619 Proline dehydrogenase PA257_5127 PF00593 TonB dependent receptor PA257_5127 PF07715 TonB-dependent Receptor Plug Domain PA257_5129 PF12833 Helix-turn-helix domain PA257_5130 PF05362 Lon protease (S16) C-terminal proteolytic domain PA257_5130 PF02190 ATP-dependent protease La (LON) substrate-binding domain PA257_5130 PF00004 ATPase family associated with various cellular activities (AAA) PA257_5134 PF13649 Methyltransferase domain PA257_5135 PF08003 Protein of unknown function (DUF1698) PA257_5136 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PA257_5137 PF11967 Recombination protein O N terminal PA257_5137 PF02565 Recombination protein O C terminal PA257_5138 PF01926 50S ribosome-binding GTPase PA257_5138 PF07650 KH domain PA257_5139 PF00035 Double-stranded RNA binding motif PA257_5139 PF14622 Ribonuclease-III-like PA257_5141 PF10502 Signal peptidase, peptidase S26 PA257_5142 PF00009 Elongation factor Tu GTP binding domain PA257_5142 PF03144 Elongation factor Tu domain 2 PA257_5142 PF06421 GTP-binding protein LepA C-terminus PA257_5142 PF00679 Elongation factor G C-terminus PA257_5143 PF13180 PDZ domain PA257_5145 PF03888 MucB/RseB N-terminal domain PA257_5145 PF17188 MucB/RseB C-terminal domain PA257_5146 PF03873 Anti sigma-E protein RseA, C-terminal domain PA257_5146 PF03872 Anti sigma-E protein RseA, N-terminal domain PA257_5147 PF08281 Sigma-70, region 4 PA257_5147 PF04542 Sigma-70 region 2 PA257_5148 PF02910 Fumarate reductase flavoprotein C-term PA257_5148 PF00890 FAD binding domain PA257_5150 PF03937 Flavinator of succinate dehydrogenase PA257_5151 PF01571 Aminomethyltransferase folate-binding domain PA257_5153 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_5153 PF00512 His Kinase A (phospho-acceptor) domain PA257_5154 PF00072 Response regulator receiver domain PA257_5154 PF00486 Transcriptional regulatory protein, C terminal PA257_5155 PF03573 outer membrane porin, OprD family PA257_5158 PF01970 Tripartite tricarboxylate transporter TctA family PA257_5159 PF05145 Transition state regulatory protein AbrB PA257_5160 PF03167 Uracil DNA glycosylase superfamily PA257_5161 PF04294 VanW like protein PA257_5162 PF12833 Helix-turn-helix domain PA257_5162 PF02311 AraC-like ligand binding domain PA257_5163 PF00171 Aldehyde dehydrogenase family PA257_5164 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_5164 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_5164 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_5165 PF00378 Enoyl-CoA hydratase/isomerase PA257_5167 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PA257_5167 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PA257_5169 PF13460 NAD(P)H-binding PA257_5170 PF14863 Alkyl sulfatase dimerisation PA257_5170 PF00753 Metallo-beta-lactamase superfamily PA257_5170 PF14864 Alkyl sulfatase C-terminal PA257_5171 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_5171 PF03466 LysR substrate binding domain PA257_5179 PF01479 S4 domain PA257_5179 PF00849 RNA pseudouridylate synthase PA257_5182 PF00561 alpha/beta hydrolase fold PA257_5184 PF00589 Phage integrase family PA257_5184 PF14659 Phage integrase, N-terminal SAM-like domain PA257_5184 PF13356 Arm DNA-binding domain PA257_5187 PF13614 AAA domain PA257_5194 PF00436 Single-strand binding protein family PA257_5195 PF01131 DNA topoisomerase PA257_5195 PF01751 Toprim domain PA257_5228 PF04002 RadC-like JAB domain PA257_5235 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system PA257_5239 PF13700 Domain of unknown function (DUF4158) PA257_5239 PF01526 Tn3 transposase DDE domain PA257_5240 PF01526 Tn3 transposase DDE domain PA257_5240 PF13700 Domain of unknown function (DUF4158) PA257_5241 PF13700 Domain of unknown function (DUF4158) PA257_5241 PF01526 Tn3 transposase DDE domain PA257_5242 PF02796 Helix-turn-helix domain of resolvase PA257_5242 PF00239 Resolvase, N terminal domain PA257_5243 PF00563 EAL domain PA257_5243 PF11809 Domain of unknown function (DUF3330) PA257_5244 PF13495 Phage integrase, N-terminal SAM-like domain PA257_5244 PF00589 Phage integrase family PA257_5246 PF00809 Pterin binding enzyme PA257_5247 PF07690 Major Facilitator Superfamily PA257_5248 PF00440 Bacterial regulatory proteins, tetR family PA257_5248 PF02909 Tetracyclin repressor-like, C-terminal domain PA257_5250 PF07690 Major Facilitator Superfamily PA257_5252 PF13495 Phage integrase, N-terminal SAM-like domain PA257_5252 PF00589 Phage integrase family PA257_5253 PF00809 Pterin binding enzyme PA257_5254 PF13610 DDE domain PA257_5255 PF03707 Bacterial signalling protein N terminal repeat PA257_5255 PF00563 EAL domain PA257_5255 PF00990 Diguanylate cyclase, GGDEF domain PA257_5256 PF05052 MerE protein PA257_5257 PF13411 MerR HTH family regulatory protein PA257_5258 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PA257_5258 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_5258 PF00403 Heavy-metal-associated domain PA257_5259 PF00403 Heavy-metal-associated domain PA257_5260 PF02411 MerT mercuric transport protein PA257_5261 PF09278 MerR, DNA binding PA257_5261 PF00376 MerR family regulatory protein PA257_5263 PF00005 ABC transporter PA257_5264 PF04851 Type III restriction enzyme, res subunit PA257_5264 PF08774 VRR-NUC domain PA257_5265 PF18273 Type III R-M EcoP15I C-terminal domain PA257_5265 PF01555 DNA methylase PA257_5268 PF00176 SNF2 family N-terminal domain PA257_5268 PF00271 Helicase conserved C-terminal domain PA257_5270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_5270 PF03466 LysR substrate binding domain PA257_5272 PF00004 ATPase family associated with various cellular activities (AAA) PA257_5276 PF00589 Phage integrase family PA257_5276 PF02899 Phage integrase, N-terminal SAM-like domain PA257_5278 PF05707 Zonular occludens toxin (Zot) PA257_5287 PF09857 Putative toxin of bacterial toxin-antitoxin pair PA257_5289 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PA257_5291 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_5291 PF03466 LysR substrate binding domain PA257_5292 PF00563 EAL domain PA257_5293 PF00132 Bacterial transferase hexapeptide (six repeats) PA257_5295 PF00535 Glycosyl transferase family 2 PA257_5296 PF00132 Bacterial transferase hexapeptide (six repeats) PA257_5297 PF01425 Amidase PA257_5298 PF07690 Major Facilitator Superfamily PA257_5301 PF03466 LysR substrate binding domain PA257_5301 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_5303 PF00639 PPIC-type PPIASE domain PA257_5308 PF02472 Biopolymer transport protein ExbD/TolR PA257_5309 PF01618 MotA/TolQ/ExbB proton channel family PA257_5310 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB PA257_5310 PF08479 POTRA domain, ShlB-type PA257_5310 PF17287 POTRA domain PA257_5315 PF12849 PBP superfamily domain PA257_5316 PF00482 Type II secretion system (T2SS), protein F PA257_5317 PF00437 Type II/IV secretion system protein PA257_5318 PF03958 Bacterial type II/III secretion system short domain PA257_5318 PF00263 Bacterial type II and III secretion system protein PA257_5321 PF03934 Type II secretion system (T2SS), protein K PA257_5322 PF07963 Prokaryotic N-terminal methylation motif PA257_5322 PF08334 Type II secretion system (T2SS), protein G PA257_5323 PF02501 Type II secretion system (T2SS), protein I PA257_5323 PF07963 Prokaryotic N-terminal methylation motif PA257_5325 PF12019 Type II transport protein GspH PA257_5325 PF07963 Prokaryotic N-terminal methylation motif PA257_5326 PF07963 Prokaryotic N-terminal methylation motif PA257_5326 PF11612 Type II secretion system (T2SS), protein J PA257_5331 PF01126 Heme oxygenase PA257_5334 PF14579 Helix-hairpin-helix motif PA257_5334 PF07733 Bacterial DNA polymerase III alpha NTPase domain PA257_5334 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PA257_5334 PF02811 PHP domain PA257_5342 PF00149 Calcineurin-like phosphoesterase PA257_5342 PF12320 Type 5 capsule protein repressor C-terminal domain PA257_5344 PF13538 UvrD-like helicase C-terminal domain PA257_5345 PF12705 PD-(D/E)XK nuclease superfamily PA257_5345 PF13361 UvrD-like helicase C-terminal domain PA257_5345 PF00580 UvrD/REP helicase N-terminal domain PA257_5346 PF17946 RecC C-terminal domain PA257_5348 PF00892 EamA-like transporter family PA257_5351 PF02743 Cache domain PA257_5351 PF00672 HAMP domain PA257_5351 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_5353 PF01384 Phosphate transporter family PA257_5354 PF00512 His Kinase A (phospho-acceptor) domain PA257_5354 PF08448 PAS fold PA257_5354 PF13188 PAS domain PA257_5354 PF00072 Response regulator receiver domain PA257_5354 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_5357 PF00072 Response regulator receiver domain PA257_5357 PF00196 Bacterial regulatory proteins, luxR family PA257_5363 PF00437 Type II/IV secretion system protein PA257_5365 PF00263 Bacterial type II and III secretion system protein PA257_5365 PF04972 BON domain PA257_5365 PF13629 Pilus formation protein N terminal region PA257_5368 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_5368 PF00672 HAMP domain PA257_5368 PF02743 Cache domain PA257_5369 PF05872 Bacterial protein of unknown function (DUF853) PA257_5371 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_5371 PF00672 HAMP domain PA257_5371 PF02743 Cache domain PA257_5372 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_5372 PF00672 HAMP domain PA257_5372 PF02743 Cache domain PA257_5374 PF13439 Glycosyltransferase Family 4 PA257_5374 PF00534 Glycosyl transferases group 1 PA257_5378 PF01842 ACT domain PA257_5378 PF00551 Formyl transferase PA257_5380 PF08411 Exonuclease C-terminal PA257_5380 PF00929 Exonuclease PA257_5386 PF07726 ATPase family associated with various cellular activities (AAA) PA257_5386 PF17863 AAA lid domain PA257_5392 PF00582 Universal stress protein family PA257_5393 PF00224 Pyruvate kinase, barrel domain PA257_5393 PF02887 Pyruvate kinase, alpha/beta domain PA257_5394 PF00378 Enoyl-CoA hydratase/isomerase PA257_5395 PF00970 Oxidoreductase FAD-binding domain PA257_5395 PF00175 Oxidoreductase NAD-binding domain PA257_5396 PF00990 Diguanylate cyclase, GGDEF domain PA257_5396 PF08448 PAS fold PA257_5397 PF05683 Fumarase C-terminus PA257_5397 PF05681 Fumarate hydratase (Fumerase) PA257_5398 PF01566 Natural resistance-associated macrophage protein PA257_5400 PF01965 DJ-1/PfpI family PA257_5403 PF13091 PLD-like domain PA257_5403 PF13396 Phospholipase_D-nuclease N-terminal PA257_5406 PF01425 Amidase PA257_5407 PF07690 Major Facilitator Superfamily PA257_5408 PF01546 Peptidase family M20/M25/M40 PA257_5408 PF07687 Peptidase dimerisation domain PA257_5411 PF11954 Domain of unknown function (DUF3471) PA257_5411 PF00144 Beta-lactamase PA257_5412 PF00258 Flavodoxin PA257_5412 PF01613 Flavin reductase like domain PA257_5416 PF00582 Universal stress protein family PA257_5419 PF07690 Major Facilitator Superfamily PA257_5420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PA257_5421 PF09012 FeoC like transcriptional regulator PA257_5422 PF02421 Ferrous iron transport protein B PA257_5422 PF07664 Ferrous iron transport protein B C terminus PA257_5422 PF07670 Nucleoside recognition PA257_5422 PF17910 FeoB cytosolic helical domain PA257_5423 PF04023 FeoA domain PA257_5426 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family PA257_5428 PF03466 LysR substrate binding domain PA257_5428 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_5430 PF01810 LysE type translocator PA257_5431 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PA257_5431 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PA257_5432 PF00563 EAL domain PA257_5432 PF03707 Bacterial signalling protein N terminal repeat PA257_5432 PF00990 Diguanylate cyclase, GGDEF domain PA257_5434 PF04011 LemA family PA257_5439 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PA257_5440 PF00873 AcrB/AcrD/AcrF family PA257_5441 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PA257_5441 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PA257_5445 PF00672 HAMP domain PA257_5445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_5445 PF00512 His Kinase A (phospho-acceptor) domain PA257_5446 PF00072 Response regulator receiver domain PA257_5446 PF00486 Transcriptional regulatory protein, C terminal PA257_5449 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PA257_5451 PF00118 TCP-1/cpn60 chaperonin family PA257_5452 PF00166 Chaperonin 10 Kd subunit PA257_5453 PF04186 FxsA cytoplasmic membrane protein PA257_5459 PF07690 Major Facilitator Superfamily PA257_5460 PF05552 Conserved TM helix PA257_5460 PF00924 Mechanosensitive ion channel PA257_5461 PF04461 Protein of unknown function (DUF520) PA257_5463 PF02558 Ketopantoate reductase PanE/ApbA PA257_5463 PF08546 Ketopantoate reductase PanE/ApbA C terminal PA257_5464 PF13188 PAS domain PA257_5464 PF00512 His Kinase A (phospho-acceptor) domain PA257_5464 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_5464 PF08448 PAS fold PA257_5464 PF00072 Response regulator receiver domain PA257_5465 PF01923 Cobalamin adenosyltransferase PA257_5466 PF00293 NUDIX domain PA257_5467 PF00043 Glutathione S-transferase, C-terminal domain PA257_5467 PF13417 Glutathione S-transferase, N-terminal domain PA257_5468 PF01960 ArgJ family PA257_5469 PF02810 SEC-C motif PA257_5469 PF07517 SecA DEAD-like domain PA257_5469 PF07516 SecA Wing and Scaffold domain PA257_5469 PF01043 SecA preprotein cross-linking domain PA257_5471 PF01464 Transglycosylase SLT domain PA257_5471 PF10145 Phage-related minor tail protein PA257_5471 PF01551 Peptidase family M23 PA257_5473 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PA257_5474 PF12327 FtsZ family, C-terminal domain PA257_5474 PF00091 Tubulin/FtsZ family, GTPase domain PA257_5475 PF02491 SHS2 domain inserted in FTSA PA257_5476 PF03799 Cell division protein FtsQ PA257_5476 PF08478 POTRA domain, FtsQ-type PA257_5477 PF01820 D-ala D-ala ligase N-terminus PA257_5477 PF07478 D-ala D-ala ligase C-terminus PA257_5478 PF02875 Mur ligase family, glutamate ligase domain PA257_5478 PF08245 Mur ligase middle domain PA257_5478 PF01225 Mur ligase family, catalytic domain PA257_5479 PF03033 Glycosyltransferase family 28 N-terminal domain PA257_5479 PF04101 Glycosyltransferase family 28 C-terminal domain PA257_5480 PF01098 Cell cycle protein PA257_5481 PF02875 Mur ligase family, glutamate ligase domain PA257_5481 PF08245 Mur ligase middle domain PA257_5482 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 PA257_5482 PF00953 Glycosyl transferase family 4 PA257_5483 PF08245 Mur ligase middle domain PA257_5483 PF02875 Mur ligase family, glutamate ligase domain PA257_5483 PF01225 Mur ligase family, catalytic domain PA257_5484 PF01225 Mur ligase family, catalytic domain PA257_5484 PF02875 Mur ligase family, glutamate ligase domain PA257_5484 PF08245 Mur ligase middle domain PA257_5485 PF03717 Penicillin-binding Protein dimerisation domain PA257_5485 PF00905 Penicillin binding protein transpeptidase domain PA257_5486 PF04999 Cell division protein FtsL PA257_5487 PF01795 MraW methylase family PA257_5488 PF02381 MraZ protein, putative antitoxin-like PA257_5489 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PA257_5490 PF04348 LppC putative lipoprotein PA257_5491 PF02021 Uncharacterised protein family UPF0102 PA257_5492 PF13580 SIS domain PA257_5493 PF04972 BON domain PA257_5494 PF04386 Stringent starvation protein B PA257_5495 PF02798 Glutathione S-transferase, N-terminal domain PA257_5495 PF00043 Glutathione S-transferase, C-terminal domain PA257_5496 PF02167 Cytochrome C1 family PA257_5497 PF00032 Cytochrome b(C-terminal)/b6/petD PA257_5497 PF00033 Cytochrome b/b6/petB PA257_5498 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal PA257_5498 PF00355 Rieske [2Fe-2S] domain PA257_5499 PF00380 Ribosomal protein S9/S16 PA257_5500 PF00572 Ribosomal protein L13 PA257_5501 PF00248 Aldo/keto reductase family PA257_5502 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_5502 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_5502 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_5505 PF03969 AFG1-like ATPase PA257_5506 PF00579 tRNA synthetases class I (W and Y) PA257_5507 PF02129 X-Pro dipeptidyl-peptidase (S15 family) PA257_5509 PF00009 Elongation factor Tu GTP binding domain PA257_5510 PF01507 Phosphoadenosine phosphosulfate reductase family PA257_5511 PF13406 Transglycosylase SLT domain PA257_5512 PF01784 NIF3 (NGG1p interacting factor 3) PA257_5513 PF13180 PDZ domain PA257_5514 PF00155 Aminotransferase class I and II PA257_5515 PF00815 Histidinol dehydrogenase PA257_5517 PF01634 ATP phosphoribosyltransferase PA257_5518 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PA257_5521 PF05494 MlaC protein PA257_5522 PF02470 MlaD protein PA257_5523 PF02405 Permease MlaE PA257_5524 PF00005 ABC transporter PA257_5525 PF00571 CBS domain PA257_5525 PF01380 SIS domain PA257_5529 PF12399 Branched-chain amino acid ATP-binding cassette transporter PA257_5529 PF00005 ABC transporter PA257_5530 PF04552 Sigma-54, DNA binding domain PA257_5530 PF04963 Sigma-54 factor, core binding domain PA257_5530 PF00309 Sigma-54 factor, Activator interacting domain (AID) PA257_5531 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PA257_5532 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PA257_5533 PF03668 P-loop ATPase protein family PA257_5534 PF00381 PTS HPr component phosphorylation site PA257_5535 PF02535 ZIP Zinc transporter PA257_5536 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PA257_5536 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PA257_5538 PF10415 Fumarase C C-terminus PA257_5538 PF00206 Lyase PA257_5540 PF01523 Putative modulator of DNA gyrase PA257_5541 PF04751 Protein of unknown function (DUF615) PA257_5542 PF01523 Putative modulator of DNA gyrase PA257_5543 PF00795 Carbon-nitrogen hydrolase PA257_5545 PF10150 Ribonuclease E/G family PA257_5545 PF00575 S1 RNA binding domain PA257_5546 PF02545 Maf-like protein PA257_5548 PF04085 rod shape-determining protein MreC PA257_5551 PF02686 Glu-tRNAGln amidotransferase C subunit PA257_5552 PF01425 Amidase PA257_5553 PF02637 GatB domain PA257_5553 PF02934 GatB/GatE catalytic domain PA257_5554 PF03330 Lytic transglycolase PA257_5555 PF02627 Carboxymuconolactone decarboxylase family PA257_5556 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) PA257_5557 PF10062 Predicted secreted protein (DUF2300) PA257_5557 PF08486 Stage II sporulation protein PA257_5558 PF01835 MG2 domain PA257_5558 PF07703 Alpha-2-macroglobulin bait region domain PA257_5558 PF00207 Alpha-2-macroglobulin family PA257_5559 PF06672 Protein of unknown function (DUF1175) PA257_5560 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) PA257_5561 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) PA257_5562 PF00072 Response regulator receiver domain PA257_5563 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_5563 PF00512 His Kinase A (phospho-acceptor) domain PA257_5565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PA257_5566 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PA257_5567 PF01321 Creatinase/Prolidase N-terminal domain PA257_5567 PF00557 Metallopeptidase family M24 PA257_5570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PA257_5573 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PA257_5574 PF00528 Binding-protein-dependent transport system inner membrane component PA257_5575 PF12911 N-terminal TM domain of oligopeptide transport permease C PA257_5575 PF00528 Binding-protein-dependent transport system inner membrane component PA257_5576 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PA257_5576 PF00005 ABC transporter PA257_5577 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PA257_5577 PF00005 ABC transporter PA257_5578 PF01810 LysE type translocator PA257_5579 PF01037 Lrp/AsnC ligand binding domain PA257_5580 PF02626 Carboxyltransferase domain, subdomain A and B PA257_5582 PF03746 LamB/YcsF family PA257_5584 PF00175 Oxidoreductase NAD-binding domain PA257_5584 PF00258 Flavodoxin PA257_5584 PF00667 FAD binding domain PA257_5585 PF07715 TonB-dependent Receptor Plug Domain PA257_5585 PF00593 TonB dependent receptor PA257_5586 PF13640 2OG-Fe(II) oxygenase superfamily PA257_5586 PF18331 PKHD-type hydroxylase C-terminal domain PA257_5588 PF00884 Sulfatase PA257_5590 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PA257_5590 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PA257_5592 PF00672 HAMP domain PA257_5592 PF02743 Cache domain PA257_5592 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_5594 PF01510 N-acetylmuramoyl-L-alanine amidase PA257_5596 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PA257_5596 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PA257_5600 PF00437 Type II/IV secretion system protein PA257_5600 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PA257_5601 PF00482 Type II secretion system (T2SS), protein F PA257_5602 PF01478 Type IV leader peptidase family PA257_5602 PF06750 Bacterial Peptidase A24 N-terminal domain PA257_5603 PF01121 Dephospho-CoA kinase PA257_5604 PF03884 DNA gyrase inhibitor YacG PA257_5612 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_5613 PF03969 AFG1-like ATPase PA257_5614 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB PA257_5614 PF08479 POTRA domain, ShlB-type PA257_5615 PF05860 haemagglutination activity domain PA257_5617 PF13614 AAA domain PA257_5625 PF03796 DnaB-like helicase C terminal domain PA257_5625 PF00772 DnaB-like helicase N terminal domain PA257_5631 PF04245 37-kD nucleoid-associated bacterial protein PA257_5642 PF01131 DNA topoisomerase PA257_5642 PF01396 Topoisomerase DNA binding C4 zinc finger PA257_5642 PF01751 Toprim domain PA257_5645 PF00271 Helicase conserved C-terminal domain PA257_5645 PF00176 SNF2 family N-terminal domain PA257_5650 PF00437 Type II/IV secretion system protein PA257_5653 PF00437 Type II/IV secretion system protein PA257_5672 PF00817 impB/mucB/samB family PA257_5672 PF13438 Domain of unknown function (DUF4113) PA257_5672 PF11799 impB/mucB/samB family C-terminal domain PA257_5673 PF00717 Peptidase S24-like PA257_5688 PF12705 PD-(D/E)XK nuclease superfamily PA257_5688 PF13361 UvrD-like helicase C-terminal domain PA257_5688 PF00580 UvrD/REP helicase N-terminal domain PA257_5710 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH PA257_5711 PF05016 ParE toxin of type II toxin-antitoxin system, parDE PA257_5713 PF00589 Phage integrase family PA257_5717 PF17871 AAA lid domain PA257_5717 PF07724 AAA domain (Cdc48 subfamily) PA257_5717 PF00004 ATPase family associated with various cellular activities (AAA) PA257_5717 PF02861 Clp amino terminal domain, pathogenicity island component PA257_5717 PF10431 C-terminal, D2-small domain, of ClpB protein PA257_5719 PF00849 RNA pseudouridylate synthase PA257_5719 PF01479 S4 domain PA257_5720 PF13525 Outer membrane lipoprotein PA257_5722 PF00512 His Kinase A (phospho-acceptor) domain PA257_5722 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_5723 PF02954 Bacterial regulatory protein, Fis family PA257_5723 PF00072 Response regulator receiver domain PA257_5723 PF00158 Sigma-54 interaction domain PA257_5724 PF01266 FAD dependent oxidoreductase PA257_5730 PF05567 Neisseria PilC beta-propeller domain PA257_5732 PF07963 Prokaryotic N-terminal methylation motif PA257_5732 PF14245 Type IV pilin PilA PA257_5733 PF02401 LytB protein PA257_5734 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PA257_5735 PF01252 Signal peptidase (SPase) II PA257_5736 PF08264 Anticodon-binding domain of tRNA PA257_5736 PF00133 tRNA synthetases class I (I, L, M and V) PA257_5736 PF06827 Zinc finger found in FPG and IleRS PA257_5737 PF06574 FAD synthetase PA257_5737 PF01687 Riboflavin kinase PA257_5738 PF03023 Lipid II flippase MurJ PA257_5739 PF01649 Ribosomal protein S20 PA257_5740 PF05981 CreA protein PA257_5741 PF00696 Amino acid kinase family PA257_5741 PF01472 PUA domain PA257_5742 PF01018 GTP1/OBG PA257_5742 PF01926 50S ribosome-binding GTPase PA257_5743 PF01016 Ribosomal L27 protein PA257_5744 PF00829 Ribosomal prokaryotic L21 protein PA257_5745 PF00348 Polyprenyl synthetase PA257_5747 PF00034 Cytochrome c PA257_5747 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PA257_5748 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PA257_5748 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PA257_5750 PF03350 Uncharacterized protein family, UPF0114 PA257_5752 PF05362 Lon protease (S16) C-terminal proteolytic domain PA257_5752 PF13654 AAA domain PA257_5757 PF00158 Sigma-54 interaction domain PA257_5757 PF06956 Regulator of RNA terminal phosphate cyclase PA257_5762 PF01139 tRNA-splicing ligase RtcB PA257_5763 PF10127 RNA repair pathway DNA polymerase beta family PA257_5764 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain PA257_5764 PF01137 RNA 3'-terminal phosphate cyclase PA257_5766 PF00034 Cytochrome c PA257_5766 PF03150 Di-haem cytochrome c peroxidase PA257_5767 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PA257_5767 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PA257_5772 PF02687 FtsX-like permease family PA257_5772 PF12704 MacB-like periplasmic core domain PA257_5772 PF00005 ABC transporter PA257_5773 PF12704 MacB-like periplasmic core domain PA257_5773 PF02687 FtsX-like permease family PA257_5773 PF00005 ABC transporter PA257_5774 PF00005 ABC transporter PA257_5774 PF12848 ABC transporter PA257_5777 PF02321 Outer membrane efflux protein PA257_5778 PF00873 AcrB/AcrD/AcrF family PA257_5779 PF00529 HlyD membrane-fusion protein of T1SS PA257_5779 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PA257_5781 PF00990 Diguanylate cyclase, GGDEF domain PA257_5781 PF00563 EAL domain PA257_5781 PF03707 Bacterial signalling protein N terminal repeat PA257_5782 PF00464 Serine hydroxymethyltransferase PA257_5784 PF07683 Cobalamin synthesis protein cobW C-terminal domain PA257_5784 PF02492 CobW/HypB/UreG, nucleotide-binding domain PA257_5786 PF04328 Selenoprotein, putative PA257_5787 PF02554 Carbon starvation protein CstA PA257_5787 PF13722 5TM C-terminal transporter carbon starvation CstA PA257_5789 PF07238 PilZ domain PA257_5790 PF18073 Rubredoxin metal binding domain PA257_5794 PF00199 Catalase PA257_5794 PF06628 Catalase-related immune-responsive PA257_5796 PF01741 Large-conductance mechanosensitive channel, MscL PA257_5797 PF00970 Oxidoreductase FAD-binding domain PA257_5797 PF00175 Oxidoreductase NAD-binding domain PA257_5798 PF03480 Bacterial extracellular solute-binding protein, family 7 PA257_5799 PF05175 Methyltransferase small domain PA257_5801 PF02625 XdhC and CoxI family PA257_5801 PF13478 XdhC Rossmann domain PA257_5802 PF00034 Cytochrome c PA257_5802 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PA257_5803 PF01799 [2Fe-2S] binding domain PA257_5803 PF00111 2Fe-2S iron-sulfur cluster binding domain PA257_5804 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PA257_5808 PF08479 POTRA domain, ShlB-type PA257_5808 PF17287 POTRA domain PA257_5808 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB PA257_5810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PA257_5810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PA257_5811 PF05175 Methyltransferase small domain PA257_5811 PF08468 Methyltransferase small domain N-terminal PA257_5812 PF00324 Amino acid permease PA257_5813 PF01169 Uncharacterized protein family UPF0016 PA257_5816 PF01435 Peptidase family M48 PA257_5817 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_5817 PF00672 HAMP domain PA257_5818 PF02586 SOS response associated peptidase (SRAP) PA257_5819 PF02308 MgtC family PA257_5826 PF06039 Malate:quinone oxidoreductase (Mqo) PA257_5833 PF00860 Permease family PA257_5841 PF00762 Ferrochelatase PA257_5842 PF01370 NAD dependent epimerase/dehydratase family PA257_5842 PF08338 Domain of unknown function (DUF1731) PA257_5843 PF01593 Flavin containing amine oxidoreductase PA257_5845 PF13411 MerR HTH family regulatory protein PA257_5846 PF03441 FAD binding domain of DNA photolyase PA257_5846 PF00875 DNA photolyase PA257_5847 PF09411 Lipid A 3-O-deacylase (PagL) PA257_5848 PF01177 Asp/Glu/Hydantoin racemase PA257_5849 PF00899 ThiF family PA257_5850 PF05175 Methyltransferase small domain PA257_5850 PF17827 PrmC N-terminal domain PA257_5851 PF00472 RF-1 domain PA257_5851 PF03462 PCRF domain PA257_5852 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PA257_5852 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PA257_5852 PF01488 Shikimate / quinate 5-dehydrogenase PA257_5854 PF03550 Outer membrane lipoprotein LolB PA257_5855 PF00288 GHMP kinases N terminal domain PA257_5855 PF08544 GHMP kinases C terminal PA257_5857 PF14572 Phosphoribosyl synthetase-associated domain PA257_5857 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PA257_5858 PF01386 Ribosomal L25p family PA257_5858 PF14693 Ribosomal protein TL5, C-terminal domain PA257_5859 PF01195 Peptidyl-tRNA hydrolase PA257_5860 PF06071 Protein of unknown function (DUF933) PA257_5860 PF01926 50S ribosome-binding GTPase PA257_5862 PF02899 Phage integrase, N-terminal SAM-like domain PA257_5862 PF00589 Phage integrase family PA257_5864 PF05707 Zonular occludens toxin (Zot) PA257_5878 PF00593 TonB dependent receptor PA257_5878 PF07715 TonB-dependent Receptor Plug Domain PA257_5879 PF00484 Carbonic anhydrase PA257_5881 PF00583 Acetyltransferase (GNAT) family PA257_5890 PF01547 Bacterial extracellular solute-binding protein PA257_5891 PF00528 Binding-protein-dependent transport system inner membrane component PA257_5892 PF02470 MlaD protein PA257_5893 PF04403 Paraquat-inducible protein A PA257_5894 PF04403 Paraquat-inducible protein A PA257_5901 PF01794 Ferric reductase like transmembrane component PA257_5902 PF00174 Oxidoreductase molybdopterin binding domain PA257_5903 PF01066 CDP-alcohol phosphatidyltransferase PA257_5904 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PA257_5904 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PA257_5905 PF10369 Small subunit of acetolactate synthase PA257_5906 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PA257_5906 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PA257_5906 PF00205 Thiamine pyrophosphate enzyme, central domain PA257_5909 PF04287 tRNA pseudouridine synthase C PA257_5911 PF00912 Transglycosylase PA257_5911 PF00905 Penicillin binding protein transpeptidase domain PA257_5911 PF14814 Bifunctional transglycosylase second domain PA257_5916 PF00027 Cyclic nucleotide-binding domain PA257_5918 PF00005 ABC transporter PA257_5919 PF01032 FecCD transport family PA257_5920 PF01497 Periplasmic binding protein PA257_5921 PF05171 Haemin-degrading HemS.ChuX domain PA257_5923 PF07715 TonB-dependent Receptor Plug Domain PA257_5923 PF00593 TonB dependent receptor PA257_5928 PF00155 Aminotransferase class I and II PA257_5929 PF02567 Phenazine biosynthesis-like protein PA257_5930 PF04228 Putative neutral zinc metallopeptidase PA257_5932 PF00860 Permease family PA257_5933 PF05958 tRNA (Uracil-5-)-methyltransferase PA257_5934 PF03749 Sugar fermentation stimulation protein RE domain PA257_5934 PF17746 SfsA N-terminal OB domain PA257_5935 PF00155 Aminotransferase class I and II PA257_5936 PF01258 Prokaryotic dksA/traR C4-type zinc finger PA257_5937 PF00749 tRNA synthetases class I (E and Q), catalytic domain PA257_5939 PF08447 PAS fold PA257_5939 PF00512 His Kinase A (phospho-acceptor) domain PA257_5939 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_5939 PF00989 PAS fold PA257_5940 PF00158 Sigma-54 interaction domain PA257_5940 PF00072 Response regulator receiver domain PA257_5940 PF02954 Bacterial regulatory protein, Fis family PA257_5941 PF01743 Poly A polymerase head domain PA257_5941 PF12627 Probable RNA and SrmB- binding site of polymerase A PA257_5941 PF12626 Polymerase A arginine-rich C-terminus PA257_5942 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PA257_5943 PF02548 Ketopantoate hydroxymethyltransferase PA257_5944 PF02569 Pantoate-beta-alanine ligase PA257_5945 PF02261 Aspartate decarboxylase PA257_5946 PF00342 Phosphoglucose isomerase PA257_5947 PF16177 Acetyl-coenzyme A synthetase N-terminus PA257_5947 PF13193 AMP-binding enzyme C-terminal domain PA257_5947 PF00501 AMP-binding enzyme PA257_5952 PF05532 CsbD-like PA257_5953 PF04972 BON domain PA257_5954 PF03725 3' exoribonuclease family, domain 2 PA257_5954 PF01138 3' exoribonuclease family, domain 1 PA257_5954 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PA257_5954 PF00575 S1 RNA binding domain PA257_5954 PF00013 KH domain PA257_5956 PF00312 Ribosomal protein S15 PA257_5957 PF01509 TruB family pseudouridylate synthase (N terminal domain) PA257_5957 PF09157 Pseudouridine synthase II TruB, C-terminal PA257_5957 PF16198 tRNA pseudouridylate synthase B C-terminal domain PA257_5958 PF02033 Ribosome-binding factor A PA257_5959 PF11987 Translation-initiation factor 2 PA257_5959 PF04760 Translation initiation factor IF-2, N-terminal region PA257_5959 PF00009 Elongation factor Tu GTP binding domain PA257_5959 PF08364 Bacterial translation initiation factor IF-2 associated region PA257_5960 PF13184 NusA-like KH domain PA257_5960 PF08529 NusA N-terminal domain PA257_5960 PF00575 S1 RNA binding domain PA257_5961 PF17384 RimP C-terminal SH3 domain PA257_5961 PF02576 RimP N-terminal domain PA257_5964 PF03840 Preprotein translocase SecG subunit PA257_5965 PF00121 Triosephosphate isomerase PA257_5966 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PA257_5966 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PA257_5966 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PA257_5966 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PA257_5967 PF00809 Pterin binding enzyme PA257_5968 PF00004 ATPase family associated with various cellular activities (AAA) PA257_5968 PF17862 AAA+ lid domain PA257_5968 PF06480 FtsH Extracellular PA257_5968 PF01434 Peptidase family M41 PA257_5969 PF01728 FtsJ-like methyltransferase PA257_5970 PF01985 CRS1 / YhbY (CRM) domain PA257_5972 PF03449 Transcription elongation factor, N-terminal PA257_5972 PF01272 Transcription elongation factor, GreA/GreB, C-term PA257_5973 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PA257_5973 PF02142 MGS-like domain PA257_5973 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PA257_5974 PF01810 LysE type translocator PA257_5975 PF00117 Glutamine amidotransferase class-I PA257_5975 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PA257_5976 PF05173 Dihydrodipicolinate reductase, C-terminus PA257_5976 PF01113 Dihydrodipicolinate reductase, N-terminus PA257_5977 PF00226 DnaJ domain PA257_5977 PF01556 DnaJ C terminal domain PA257_5977 PF00684 DnaJ central domain PA257_5978 PF00012 Hsp70 protein PA257_5979 PF01025 GrpE PA257_5981 PF02463 RecF/RecN/SMC N terminal domain PA257_5982 PF01475 Ferric uptake regulator family PA257_5984 PF04355 SmpA / OmlA family PA257_5985 PF03658 RnfH family Ubiquitin PA257_5986 PF03364 Polyketide cyclase / dehydrase and lipid transport PA257_5987 PF01668 SmpB protein PA257_5988 PF07729 FCD domain PA257_5988 PF00392 Bacterial regulatory proteins, gntR family PA257_5989 PF02652 L-lactate permease PA257_5990 PF01070 FMN-dependent dehydrogenase PA257_5992 PF02675 S-adenosylmethionine decarboxylase PA257_5993 PF17284 Spermidine synthase tetramerisation domain PA257_5995 PF00486 Transcriptional regulatory protein, C terminal PA257_5995 PF00072 Response regulator receiver domain PA257_5996 PF08521 Two-component sensor kinase N-terminal PA257_5996 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_5996 PF00512 His Kinase A (phospho-acceptor) domain PA257_5997 PF00376 MerR family regulatory protein PA257_5997 PF09278 MerR, DNA binding PA257_5999 PF00892 EamA-like transporter family PA257_6001 PF00072 Response regulator receiver domain PA257_6003 PF00892 EamA-like transporter family PA257_6004 PF01037 Lrp/AsnC ligand binding domain PA257_6027 PF01464 Transglycosylase SLT domain PA257_6027 PF14718 Soluble lytic murein transglycosylase L domain PA257_6032 PF03237 Terminase-like family PA257_6057 PF02803 Thiolase, C-terminal domain PA257_6057 PF00108 Thiolase, N-terminal domain PA257_6059 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PA257_6059 PF12833 Helix-turn-helix domain PA257_6064 PF03009 Glycerophosphoryl diester phosphodiesterase family PA257_6068 PF01597 Glycine cleavage H-protein PA257_6069 PF04229 GrpB protein PA257_6076 PF13520 Amino acid permease PA257_6077 PF00202 Aminotransferase class-III PA257_6079 PF09106 Elongation factor SelB, winged helix PA257_6079 PF03144 Elongation factor Tu domain 2 PA257_6079 PF09107 Elongation factor SelB, winged helix PA257_6079 PF00009 Elongation factor Tu GTP binding domain PA257_6080 PF03841 L-seryl-tRNA selenium transferase PA257_6080 PF12390 Selenocysteine synthase N terminal PA257_6081 PF04216 Protein involved in formate dehydrogenase formation PA257_6082 PF01292 Prokaryotic cytochrome b561 PA257_6083 PF09163 Formate dehydrogenase N, transmembrane PA257_6083 PF13247 4Fe-4S dicluster domain PA257_6084 PF00384 Molybdopterin oxidoreductase PA257_6084 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PA257_6084 PF01568 Molydopterin dinucleotide binding domain PA257_6085 PF01568 Molydopterin dinucleotide binding domain PA257_6085 PF00384 Molybdopterin oxidoreductase PA257_6085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PA257_6086 PF00561 alpha/beta hydrolase fold PA257_6087 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_6087 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PA257_6092 PF00535 Glycosyl transferase family 2 PA257_6094 PF01554 MatE PA257_6096 PF02690 Na+/Pi-cotransporter PA257_6099 PF00689 Cation transporting ATPase, C-terminus PA257_6099 PF00690 Cation transporter/ATPase, N-terminus PA257_6101 PF00797 N-acetyltransferase PA257_6103 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PA257_6103 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_6106 PF00106 short chain dehydrogenase PA257_6107 PF03006 Haemolysin-III related PA257_6108 PF00892 EamA-like transporter family PA257_6109 PF10100 Staphylopine dehydrogenase PA257_6110 PF03059 Nicotianamine synthase protein PA257_6111 PF00593 TonB dependent receptor PA257_6111 PF07715 TonB-dependent Receptor Plug Domain PA257_6114 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PA257_6114 PF17944 Arginine decarboxylase C-terminal helical extension PA257_6114 PF17810 Arginine decarboxylase helical bundle domain PA257_6115 PF01253 Translation initiation factor SUI1 PA257_6116 PF00293 NUDIX domain PA257_6119 PF00990 Diguanylate cyclase, GGDEF domain PA257_6119 PF00072 Response regulator receiver domain PA257_6119 PF00563 EAL domain PA257_6120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_6121 PF02683 Cytochrome C biogenesis protein transmembrane region PA257_6121 PF11412 Disulphide bond corrector protein DsbC PA257_6122 PF01220 Dehydroquinase class II PA257_6123 PF00364 Biotin-requiring enzyme PA257_6124 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PA257_6124 PF00289 Biotin carboxylase, N-terminal domain PA257_6124 PF02785 Biotin carboxylase C-terminal domain PA257_6128 PF01207 Dihydrouridine synthase (Dus) PA257_6129 PF02954 Bacterial regulatory protein, Fis family PA257_6130 PF01808 AICARFT/IMPCHase bienzyme PA257_6130 PF02142 MGS-like domain PA257_6131 PF02844 Phosphoribosylglycinamide synthetase, N domain PA257_6131 PF02843 Phosphoribosylglycinamide synthetase, C domain PA257_6131 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PA257_6132 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PA257_6132 PF00672 HAMP domain PA257_6132 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_6132 PF00512 His Kinase A (phospho-acceptor) domain PA257_6132 PF01627 Hpt domain PA257_6132 PF00072 Response regulator receiver domain PA257_6133 PF01914 MarC family integral membrane protein PA257_6135 PF13458 Periplasmic binding protein PA257_6136 PF02653 Branched-chain amino acid transport system / permease component PA257_6137 PF02653 Branched-chain amino acid transport system / permease component PA257_6138 PF12399 Branched-chain amino acid ATP-binding cassette transporter PA257_6138 PF00005 ABC transporter PA257_6139 PF00005 ABC transporter PA257_6141 PF01774 UreD urease accessory protein PA257_6142 PF00547 Urease, gamma subunit PA257_6144 PF00699 Urease beta subunit PA257_6145 PF00449 Urease alpha-subunit, N-terminal domain PA257_6145 PF01979 Amidohydrolase family PA257_6147 PF01258 Prokaryotic dksA/traR C4-type zinc finger PA257_6151 PF00012 Hsp70 protein PA257_6156 PF13411 MerR HTH family regulatory protein PA257_6157 PF05170 AsmA family PA257_6158 PF00210 Ferritin-like domain PA257_6160 PF00174 Oxidoreductase molybdopterin binding domain PA257_6161 PF01292 Prokaryotic cytochrome b561 PA257_6163 PF00072 Response regulator receiver domain PA257_6163 PF00486 Transcriptional regulatory protein, C terminal PA257_6164 PF00672 HAMP domain PA257_6164 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_6164 PF00512 His Kinase A (phospho-acceptor) domain PA257_6166 PF00487 Fatty acid desaturase PA257_6167 PF00111 2Fe-2S iron-sulfur cluster binding domain PA257_6167 PF00970 Oxidoreductase FAD-binding domain PA257_6167 PF00175 Oxidoreductase NAD-binding domain PA257_6168 PF00440 Bacterial regulatory proteins, tetR family PA257_6169 PF02814 UreE urease accessory protein, N-terminal domain PA257_6169 PF05194 UreE urease accessory protein, C-terminal domain PA257_6170 PF01730 UreF PA257_6171 PF02492 CobW/HypB/UreG, nucleotide-binding domain PA257_6172 PF04955 HupE / UreJ protein PA257_6173 PF04773 FecR protein PA257_6173 PF16220 Domain of unknown function (DUF4880) PA257_6174 PF04542 Sigma-70 region 2 PA257_6174 PF08281 Sigma-70, region 4 PA257_6176 PF03573 outer membrane porin, OprD family PA257_6177 PF00171 Aldehyde dehydrogenase family PA257_6178 PF07690 Major Facilitator Superfamily PA257_6179 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PA257_6179 PF00205 Thiamine pyrophosphate enzyme, central domain PA257_6179 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PA257_6180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_6180 PF03466 LysR substrate binding domain PA257_6181 PF07690 Major Facilitator Superfamily PA257_6183 PF00355 Rieske [2Fe-2S] domain PA257_6184 PF00175 Oxidoreductase NAD-binding domain PA257_6184 PF00111 2Fe-2S iron-sulfur cluster binding domain PA257_6186 PF00106 short chain dehydrogenase PA257_6187 PF02423 Ornithine cyclodeaminase/mu-crystallin family PA257_6188 PF00005 ABC transporter PA257_6189 PF12399 Branched-chain amino acid ATP-binding cassette transporter PA257_6189 PF00005 ABC transporter PA257_6190 PF11862 Domain of unknown function (DUF3382) PA257_6190 PF02653 Branched-chain amino acid transport system / permease component PA257_6191 PF02653 Branched-chain amino acid transport system / permease component PA257_6192 PF13458 Periplasmic binding protein PA257_6193 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_6193 PF03466 LysR substrate binding domain PA257_6194 PF00672 HAMP domain PA257_6194 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_6194 PF12729 Four helix bundle sensory module for signal transduction PA257_6196 PF01467 Cytidylyltransferase-like PA257_6198 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PA257_6198 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PA257_6199 PF02540 NAD synthase PA257_6201 PF00127 Copper binding proteins, plastocyanin/azurin family PA257_6202 PF03641 Possible lysine decarboxylase PA257_6203 PF01551 Peptidase family M23 PA257_6203 PF01476 LysM domain PA257_6204 PF00924 Mechanosensitive ion channel PA257_6204 PF05552 Conserved TM helix PA257_6205 PF01841 Transglutaminase-like superfamily PA257_6205 PF08379 Bacterial transglutaminase-like N-terminal region PA257_6206 PF04168 A predicted alpha-helical domain with a conserved ER motif. PA257_6206 PF14403 Circularly permuted ATP-grasp type 2 PA257_6207 PF08497 Radical SAM N-terminal PA257_6207 PF04055 Radical SAM superfamily PA257_6207 PF11842 Domain of unknown function (DUF3362) PA257_6209 PF00990 Diguanylate cyclase, GGDEF domain PA257_6209 PF00563 EAL domain PA257_6209 PF03707 Bacterial signalling protein N terminal repeat PA257_6209 PF13188 PAS domain PA257_6210 PF00232 Glycosyl hydrolase family 1 PA257_6211 PF00842 Alanine racemase, C-terminal domain PA257_6211 PF01168 Alanine racemase, N-terminal domain PA257_6212 PF00772 DnaB-like helicase N terminal domain PA257_6212 PF03796 DnaB-like helicase C terminal domain PA257_6213 PF03948 Ribosomal protein L9, C-terminal domain PA257_6213 PF01281 Ribosomal protein L9, N-terminal domain PA257_6215 PF01084 Ribosomal protein S18 PA257_6216 PF01250 Ribosomal protein S6 PA257_6217 PF08032 RNA 2'-O ribose methyltransferase substrate binding PA257_6217 PF00588 SpoU rRNA Methylase family PA257_6218 PF08206 Ribonuclease B OB domain PA257_6218 PF00773 RNB domain PA257_6218 PF17876 Cold shock domain PA257_6218 PF00575 S1 RNA binding domain PA257_6218 PF08461 Ribonuclease R winged-helix domain PA257_6221 PF00709 Adenylosuccinate synthetase PA257_6222 PF13393 Histidyl-tRNA synthetase PA257_6224 PF01145 SPFH domain / Band 7 family PA257_6225 PF01145 SPFH domain / Band 7 family PA257_6226 PF13167 GTP-binding GTPase N-terminal PA257_6226 PF16360 GTP-binding GTPase Middle Region PA257_6226 PF01926 50S ribosome-binding GTPase PA257_6227 PF17209 Hfq protein PA257_6229 PF08676 MutL C terminal dimerisation domain PA257_6229 PF01119 DNA mismatch repair protein, C-terminal domain PA257_6230 PF11741 AMIN domain PA257_6230 PF01520 N-acetylmuramoyl-L-alanine amidase PA257_6231 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PA257_6232 PF01256 Carbohydrate kinase PA257_6232 PF03853 YjeF-related protein N-terminus PA257_6233 PF08331 Domain of unknown function (DUF1730) PA257_6234 PF00929 Exonuclease PA257_6235 PF03193 RsgA GTPase PA257_6236 PF13677 Membrane MotB of proton-channel complex MotA/MotB PA257_6236 PF00691 OmpA family PA257_6237 PF01618 MotA/TolQ/ExbB proton channel family PA257_6239 PF00581 Rhodanese-like domain PA257_6240 PF02666 Phosphatidylserine decarboxylase PA257_6242 PF00990 Diguanylate cyclase, GGDEF domain PA257_6242 PF03707 Bacterial signalling protein N terminal repeat PA257_6242 PF00563 EAL domain PA257_6245 PF04307 LexA-binding, inner membrane-associated putative hydrolase PA257_6247 PF03989 DNA gyrase C-terminal domain, beta-propeller PA257_6247 PF00521 DNA gyrase/topoisomerase IV, subunit A PA257_6250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_6250 PF01751 Toprim domain PA257_6250 PF00986 DNA gyrase B subunit, carboxyl terminus PA257_6250 PF00204 DNA gyrase B PA257_6251 PF05728 Uncharacterised protein family (UPF0227) PA257_6252 PF00149 Calcineurin-like phosphoesterase PA257_6254 PF00293 NUDIX domain PA257_6256 PF01964 Radical SAM ThiC family PA257_6256 PF13667 ThiC-associated domain PA257_6259 PF02321 Outer membrane efflux protein PA257_6260 PF02525 Flavodoxin-like fold PA257_6261 PF00155 Aminotransferase class I and II PA257_6262 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PA257_6262 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PA257_6262 PF00205 Thiamine pyrophosphate enzyme, central domain PA257_6263 PF00549 CoA-ligase PA257_6263 PF08442 ATP-grasp domain PA257_6264 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_6264 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_6264 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_6265 PF00378 Enoyl-CoA hydratase/isomerase PA257_6267 PF00324 Amino acid permease PA257_6268 PF00512 His Kinase A (phospho-acceptor) domain PA257_6268 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_6268 PF00672 HAMP domain PA257_6268 PF17149 Periplasmic sensor domain found in signal transduction proteins PA257_6268 PF01627 Hpt domain PA257_6268 PF00072 Response regulator receiver domain PA257_6270 PF00072 Response regulator receiver domain PA257_6270 PF00486 Transcriptional regulatory protein, C terminal PA257_6274 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_6274 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PA257_6276 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PA257_6277 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_6277 PF03466 LysR substrate binding domain PA257_6278 PF00893 Small Multidrug Resistance protein PA257_6279 PF01266 FAD dependent oxidoreductase PA257_6280 PF00248 Aldo/keto reductase family PA257_6282 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_6282 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_6282 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_6283 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_6283 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_6283 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_6284 PF01467 Cytidylyltransferase-like PA257_6284 PF00294 pfkB family carbohydrate kinase PA257_6285 PF00005 ABC transporter PA257_6285 PF00664 ABC transporter transmembrane region PA257_6287 PF04932 O-Antigen ligase PA257_6288 PF00535 Glycosyl transferase family 2 PA257_6292 PF00534 Glycosyl transferases group 1 PA257_6293 PF16861 Carbamoyltransferase C-terminus PA257_6293 PF02543 Carbamoyltransferase N-terminus PA257_6298 PF00534 Glycosyl transferases group 1 PA257_6298 PF13439 Glycosyltransferase Family 4 PA257_6299 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PA257_6300 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PA257_6301 PF01063 Amino-transferase class IV PA257_6302 PF08335 GlnD PII-uridylyltransferase PA257_6302 PF03710 Glutamate-ammonia ligase adenylyltransferase PA257_6303 PF00456 Transketolase, thiamine diphosphate binding domain PA257_6303 PF17831 Pyruvate dehydrogenase E1 component middle domain PA257_6305 PF02817 e3 binding domain PA257_6305 PF00364 Biotin-requiring enzyme PA257_6305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PA257_6307 PF00990 Diguanylate cyclase, GGDEF domain PA257_6307 PF00563 EAL domain PA257_6307 PF03707 Bacterial signalling protein N terminal repeat PA257_6308 PF01625 Peptide methionine sulfoxide reductase PA257_6309 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ PA257_6310 PF12806 Acetyl-CoA dehydrogenase C-terminal like PA257_6310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_6310 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_6310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_6312 PF02080 TrkA-C domain PA257_6312 PF03471 Transporter associated domain PA257_6312 PF00999 Sodium/hydrogen exchanger family PA257_6313 PF12794 Mechanosensitive ion channel inner membrane domain 1 PA257_6313 PF12795 Mechanosensitive ion channel porin domain PA257_6313 PF00924 Mechanosensitive ion channel PA257_6314 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PA257_6315 PF01925 Sulfite exporter TauE/SafE PA257_6316 PF01053 Cys/Met metabolism PLP-dependent enzyme PA257_6319 PF13614 AAA domain PA257_6320 PF03466 LysR substrate binding domain PA257_6320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_6321 PF07690 Major Facilitator Superfamily PA257_6322 PF00106 short chain dehydrogenase PA257_6325 PF01208 Uroporphyrinogen decarboxylase (URO-D) PA257_6326 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_6326 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PA257_6327 PF00310 Glutamine amidotransferases class-II PA257_6327 PF01645 Conserved region in glutamate synthase PA257_6327 PF04898 Glutamate synthase central domain PA257_6327 PF01493 GXGXG motif PA257_6329 PF01761 3-dehydroquinate synthase PA257_6330 PF01202 Shikimate kinase PA257_6331 PF00263 Bacterial type II and III secretion system protein PA257_6331 PF03958 Bacterial type II/III secretion system short domain PA257_6331 PF07660 Secretin and TonB N terminus short domain PA257_6331 PF11741 AMIN domain PA257_6336 PF00912 Transglycosylase PA257_6336 PF00905 Penicillin binding protein transpeptidase domain PA257_6336 PF17092 Penicillin-binding protein OB-like domain PA257_6337 PF00390 Malic enzyme, N-terminal domain PA257_6337 PF03949 Malic enzyme, NAD binding domain PA257_6340 PF01197 Ribosomal protein L31 PA257_6341 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PA257_6341 PF00270 DEAD/DEAH box helicase PA257_6341 PF17764 3′ DNA-binding domain (3′BD) PA257_6341 PF00271 Helicase conserved C-terminal domain PA257_6341 PF18074 Primosomal protein N C-terminal domain PA257_6342 PF00750 tRNA synthetases class I (R) PA257_6342 PF05746 DALR anticodon binding domain PA257_6342 PF03485 Arginyl tRNA synthetase N terminal domain PA257_6344 PF00227 Proteasome subunit PA257_6345 PF07724 AAA domain (Cdc48 subfamily) PA257_6345 PF00004 ATPase family associated with various cellular activities (AAA) PA257_6348 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus PA257_6349 PF00561 alpha/beta hydrolase fold PA257_6350 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus PA257_6355 PF01209 ubiE/COQ5 methyltransferase family PA257_6357 PF03109 ABC1 family PA257_6358 PF01502 Phosphoribosyl-AMP cyclohydrolase PA257_6359 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PA257_6360 PF02416 mttA/Hcf106 family PA257_6361 PF02416 mttA/Hcf106 family PA257_6362 PF00902 Sec-independent protein translocase protein (TatC) PA257_6364 PF00672 HAMP domain PA257_6364 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PA257_6364 PF16591 Helical bimodular sensor domain PA257_6365 PF03682 Uncharacterised protein family (UPF0158) PA257_6366 PF00005 ABC transporter PA257_6367 PF00528 Binding-protein-dependent transport system inner membrane component PA257_6368 PF00497 Bacterial extracellular solute-binding proteins, family 3 PA257_6369 PF00535 Glycosyl transferase family 2 PA257_6370 PF04349 Periplasmic glucan biosynthesis protein, MdoG PA257_6371 PF02580 D-Tyr-tRNA(Tyr) deacylase PA257_6372 PF00561 alpha/beta hydrolase fold PA257_6373 PF00293 NUDIX domain PA257_6374 PF00497 Bacterial extracellular solute-binding proteins, family 3 PA257_6375 PF01042 Endoribonuclease L-PSP PA257_6376 PF01266 FAD dependent oxidoreductase PA257_6377 PF03466 LysR substrate binding domain PA257_6377 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_6380 PF13396 Phospholipase_D-nuclease N-terminal PA257_6380 PF13091 PLD-like domain PA257_6381 PF04717 Type VI secretion system, phage-baseplate injector PA257_6383 PF01979 Amidohydrolase family PA257_6384 PF00221 Aromatic amino acid lyase PA257_6385 PF00571 CBS domain PA257_6385 PF00005 ABC transporter PA257_6386 PF00528 Binding-protein-dependent transport system inner membrane component PA257_6388 PF00324 Amino acid permease PA257_6389 PF00221 Aromatic amino acid lyase PA257_6390 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PA257_6391 PF17391 Urocanase N-terminal domain PA257_6391 PF01175 Urocanase Rossmann-like domain PA257_6391 PF17392 Urocanase C-terminal domain PA257_6395 PF05962 HutD PA257_6396 PF07702 UTRA domain PA257_6396 PF00392 Bacterial regulatory proteins, gntR family PA257_6397 PF01979 Amidohydrolase family PA257_6398 PF08212 Lipocalin-like domain PA257_6401 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain PA257_6402 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PA257_6403 PF03797 Autotransporter beta-domain PA257_6403 PF00657 GDSL-like Lipase/Acylhydrolase PA257_6407 PF00376 MerR family regulatory protein PA257_6407 PF09278 MerR, DNA binding PA257_6409 PF02568 Thiamine biosynthesis protein (ThiI) PA257_6409 PF02926 THUMP domain PA257_6411 PF03951 Glutamine synthetase, beta-Grasp domain PA257_6411 PF00120 Glutamine synthetase, catalytic domain PA257_6413 PF00924 Mechanosensitive ion channel PA257_6416 PF00512 His Kinase A (phospho-acceptor) domain PA257_6416 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_6416 PF00989 PAS fold PA257_6417 PF00158 Sigma-54 interaction domain PA257_6417 PF00072 Response regulator receiver domain PA257_6417 PF02954 Bacterial regulatory protein, Fis family PA257_6420 PF00588 SpoU rRNA Methylase family PA257_6421 PF02556 Preprotein translocase subunit SecB PA257_6422 PF00462 Glutaredoxin PA257_6424 PF01676 Metalloenzyme superfamily PA257_6424 PF06415 BPG-independent PGAM N-terminus (iPGM_N) PA257_6427 PF01551 Peptidase family M23 PA257_6428 PF13180 PDZ domain PA257_6428 PF03572 Peptidase family S41 PA257_6429 PF04748 Divergent polysaccharide deacetylase PA257_6434 PF00977 Histidine biosynthesis protein PA257_6435 PF00977 Histidine biosynthesis protein PA257_6437 PF00117 Glutamine amidotransferase class-I PA257_6438 PF00475 Imidazoleglycerol-phosphate dehydratase PA257_6441 PF01266 FAD dependent oxidoreductase PA257_6443 PF00633 Helix-hairpin-helix motif PA257_6443 PF00730 HhH-GPD superfamily base excision DNA repair protein PA257_6443 PF14815 NUDIX domain PA257_6443 PF10576 Iron-sulfur binding domain of endonuclease III PA257_6444 PF04362 Bacterial Fe(2+) trafficking PA257_6445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PA257_6445 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PA257_6449 PF00005 ABC transporter PA257_6450 PF00497 Bacterial extracellular solute-binding proteins, family 3 PA257_6451 PF00528 Binding-protein-dependent transport system inner membrane component PA257_6452 PF00528 Binding-protein-dependent transport system inner membrane component PA257_6454 PF01047 MarR family PA257_6455 PF02321 Outer membrane efflux protein PA257_6456 PF00529 HlyD membrane-fusion protein of T1SS PA257_6456 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PA257_6457 PF07690 Major Facilitator Superfamily PA257_6509 PF13356 Arm DNA-binding domain PA257_6509 PF00589 Phage integrase family PA257_6512 PF16363 GDP-mannose 4,6 dehydratase PA257_6513 PF04321 RmlD substrate binding domain PA257_6514 PF00483 Nucleotidyl transferase PA257_6515 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PA257_6516 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_6516 PF02743 Cache domain PA257_6516 PF00512 His Kinase A (phospho-acceptor) domain PA257_6517 PF00158 Sigma-54 interaction domain PA257_6517 PF02954 Bacterial regulatory protein, Fis family PA257_6517 PF00072 Response regulator receiver domain PA257_6518 PF03480 Bacterial extracellular solute-binding protein, family 7 PA257_6519 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PA257_6520 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PA257_6521 PF13520 Amino acid permease PA257_6523 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PA257_6523 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PA257_6524 PF00696 Amino acid kinase family PA257_6525 PF02801 Beta-ketoacyl synthase, C-terminal domain PA257_6525 PF00109 Beta-ketoacyl synthase, N-terminal domain PA257_6526 PF00459 Inositol monophosphatase family PA257_6527 PF00293 NUDIX domain PA257_6528 PF13419 Haloacid dehalogenase-like hydrolase PA257_6529 PF04972 BON domain PA257_6529 PF01476 LysM domain PA257_6530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_6530 PF03466 LysR substrate binding domain PA257_6531 PF02634 FdhD/NarQ family PA257_6532 PF00384 Molybdopterin oxidoreductase PA257_6532 PF01568 Molydopterin dinucleotide binding domain PA257_6535 PF02599 Global regulator protein family PA257_6536 PF01817 Chorismate mutase type II PA257_6537 PF03061 Thioesterase superfamily PA257_6538 PF00465 Iron-containing alcohol dehydrogenase PA257_6539 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PA257_6539 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PA257_6539 PF12806 Acetyl-CoA dehydrogenase C-terminal like PA257_6539 PF02770 Acyl-CoA dehydrogenase, middle domain PA257_6540 PF00378 Enoyl-CoA hydratase/isomerase PA257_6540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PA257_6540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PA257_6541 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_6541 PF03466 LysR substrate binding domain PA257_6542 PF00881 Nitroreductase family PA257_6544 PF01293 Phosphoenolpyruvate carboxykinase PA257_6545 PF01430 Hsp33 protein PA257_6547 PF01479 S4 domain PA257_6548 PF18030 RimK PreATP-grasp domain PA257_6548 PF08443 RimK-like ATP-grasp domain PA257_6549 PF08443 RimK-like ATP-grasp domain PA257_6549 PF18030 RimK PreATP-grasp domain PA257_6550 PF17676 LD-carboxypeptidase C-terminal domain PA257_6550 PF02016 LD-carboxypeptidase N-terminal domain PA257_6551 PF00512 His Kinase A (phospho-acceptor) domain PA257_6551 PF00672 HAMP domain PA257_6551 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_6552 PF00072 Response regulator receiver domain PA257_6552 PF00486 Transcriptional regulatory protein, C terminal PA257_6553 PF00575 S1 RNA binding domain PA257_6553 PF16921 Tex protein YqgF-like domain PA257_6553 PF17674 HHH domain PA257_6553 PF09371 Tex-like protein N-terminal domain PA257_6555 PF04262 Glutamate-cysteine ligase PA257_6556 PF00583 Acetyltransferase (GNAT) family PA257_6556 PF00696 Amino acid kinase family PA257_6557 PF01914 MarC family integral membrane protein PA257_6558 PF01546 Peptidase family M20/M25/M40 PA257_6558 PF07687 Peptidase dimerisation domain PA257_6559 PF01384 Phosphate transporter family PA257_6560 PF01865 Protein of unknown function DUF47 PA257_6561 PF01928 CYTH domain PA257_6562 PF00437 Type II/IV secretion system protein PA257_6565 PF02347 Glycine cleavage system P-protein PA257_6565 PF01212 Beta-eliminating lyase PA257_6566 PF01597 Glycine cleavage H-protein PA257_6567 PF08669 Glycine cleavage T-protein C-terminal barrel domain PA257_6567 PF01571 Aminomethyltransferase folate-binding domain PA257_6568 PF00528 Binding-protein-dependent transport system inner membrane component PA257_6570 PF03466 LysR substrate binding domain PA257_6570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_6573 PF01494 FAD binding domain PA257_6575 PF01494 FAD binding domain PA257_6576 PF05195 Aminopeptidase P, N-terminal domain PA257_6576 PF00557 Metallopeptidase family M24 PA257_6577 PF03695 Uncharacterised protein family (UPF0149) PA257_6579 PF05164 Cell division protein ZapA PA257_6580 PF01812 5-formyltetrahydrofolate cyclo-ligase family PA257_6584 PF00005 ABC transporter PA257_6585 PF13533 Biotin-lipoyl like PA257_6587 PF02801 Beta-ketoacyl synthase, C-terminal domain PA257_6587 PF00698 Acyl transferase domain PA257_6587 PF00109 Beta-ketoacyl synthase, N-terminal domain PA257_6587 PF08240 Alcohol dehydrogenase GroES-like domain PA257_6587 PF08990 Erythronolide synthase docking PA257_6587 PF00550 Phosphopantetheine attachment site PA257_6587 PF14765 Polyketide synthase dehydratase PA257_6587 PF16197 Ketoacyl-synthetase C-terminal extension PA257_6587 PF08659 KR domain PA257_6588 PF07690 Major Facilitator Superfamily PA257_6589 PF00175 Oxidoreductase NAD-binding domain PA257_6590 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase PA257_6591 PF01757 Acyltransferase family PA257_6592 PF07497 Rho termination factor, RNA-binding domain PA257_6592 PF07498 Rho termination factor, N-terminal domain PA257_6592 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PA257_6594 PF00085 Thioredoxin PA257_6595 PF02541 Ppx/GppA phosphatase family PA257_6596 PF13089 Polyphosphate kinase N-terminal domain PA257_6596 PF13090 Polyphosphate kinase C-terminal domain 2 PA257_6596 PF02503 Polyphosphate kinase middle domain PA257_6596 PF17941 Polyphosphate kinase C-terminal domain 1 PA257_6597 PF00490 Delta-aminolevulinic acid dehydratase PA257_6598 PF09335 SNARE associated Golgi protein PA257_6600 PF03061 Thioesterase superfamily PA257_6601 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 PA257_6602 PF03239 Iron permease FTR1 family PA257_6603 PF01810 LysE type translocator PA257_6604 PF03741 Integral membrane protein TerC family PA257_6606 PF00005 ABC transporter PA257_6606 PF12848 ABC transporter PA257_6609 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PA257_6609 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PA257_6610 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ PA257_6611 PF02600 Disulfide bond formation protein DsbB PA257_6614 PF02602 Uroporphyrinogen-III synthase HemD PA257_6615 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PA257_6615 PF03900 Porphobilinogen deaminase, C-terminal domain PA257_6616 PF04397 LytTr DNA-binding domain PA257_6616 PF00072 Response regulator receiver domain PA257_6617 PF06580 Histidine kinase PA257_6617 PF07694 5TMR of 5TMR-LYT PA257_6617 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_6618 PF14698 Argininosuccinate lyase C-terminal PA257_6618 PF00206 Lyase PA257_6621 PF04717 Type VI secretion system, phage-baseplate injector PA257_6621 PF16671 Actin cross-linking domain PA257_6622 PF05638 Type VI secretion system effector, Hcp PA257_6623 PF01544 CorA-like Mg2+ transporter protein PA257_6627 PF01295 Adenylate cyclase, class-I PA257_6627 PF12633 Adenylate cyclase NT domain PA257_6629 PF01272 Transcription elongation factor, GreA/GreB, C-term PA257_6629 PF14760 Rnk N-terminus PA257_6631 PF01491 Frataxin-like domain PA257_6632 PF13627 Prokaryotic lipoprotein-attachment site PA257_6633 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PA257_6633 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PA257_6634 PF01678 Diaminopimelate epimerase PA257_6636 PF02899 Phage integrase, N-terminal SAM-like domain PA257_6636 PF00589 Phage integrase family PA257_6639 PF00392 Bacterial regulatory proteins, gntR family PA257_6639 PF00155 Aminotransferase class I and II PA257_6643 PF01894 Uncharacterised protein family UPF0047 PA257_6644 PF00909 Ammonium Transporter Family PA257_6645 PF00543 Nitrogen regulatory protein P-II PA257_6646 PF04380 Membrane fusogenic activity PA257_6647 PF01078 Magnesium chelatase, subunit ChlI PA257_6647 PF13335 Magnesium chelatase, subunit ChlI C-terminal PA257_6656 PF01527 Transposase PA257_6657 PF00665 Integrase core domain PA257_6668 PF13361 UvrD-like helicase C-terminal domain PA257_6668 PF00580 UvrD/REP helicase N-terminal domain PA257_6670 PF00580 UvrD/REP helicase N-terminal domain PA257_6670 PF13361 UvrD-like helicase C-terminal domain PA257_6670 PF12705 PD-(D/E)XK nuclease superfamily PA257_6674 PF13335 Magnesium chelatase, subunit ChlI C-terminal PA257_6674 PF01078 Magnesium chelatase, subunit ChlI PA257_6675 PF02028 BCCT, betaine/carnitine/choline family transporter PA257_6677 PF03466 LysR substrate binding domain PA257_6677 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_6678 PF00990 Diguanylate cyclase, GGDEF domain PA257_6678 PF03707 Bacterial signalling protein N terminal repeat PA257_6678 PF00563 EAL domain PA257_6679 PF13361 UvrD-like helicase C-terminal domain PA257_6679 PF00580 UvrD/REP helicase N-terminal domain PA257_6680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PA257_6680 PF00205 Thiamine pyrophosphate enzyme, central domain PA257_6680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PA257_6681 PF00156 Phosphoribosyl transferase domain PA257_6682 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PA257_6682 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PA257_6683 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PA257_6684 PF01381 Helix-turn-helix PA257_6684 PF07883 Cupin domain PA257_6685 PF01168 Alanine racemase, N-terminal domain PA257_6685 PF00842 Alanine racemase, C-terminal domain PA257_6686 PF01042 Endoribonuclease L-PSP PA257_6687 PF01266 FAD dependent oxidoreductase PA257_6689 PF13617 YnbE-like lipoprotein PA257_6691 PF01037 Lrp/AsnC ligand binding domain PA257_6692 PF01266 FAD dependent oxidoreductase PA257_6693 PF13091 PLD-like domain PA257_6694 PF07690 Major Facilitator Superfamily PA257_6695 PF00171 Aldehyde dehydrogenase family PA257_6697 PF00202 Aminotransferase class-III PA257_6700 PF00471 Ribosomal protein L33 PA257_6701 PF00830 Ribosomal L28 family PA257_6702 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PA257_6704 PF04002 RadC-like JAB domain PA257_6705 PF04127 DNA / pantothenate metabolism flavoprotein PA257_6705 PF02441 Flavoprotein PA257_6706 PF00692 dUTPase PA257_6707 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PA257_6707 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PA257_6707 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PA257_6707 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PA257_6708 PF00696 Amino acid kinase family PA257_6709 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PA257_6709 PF12833 Helix-turn-helix domain PA257_6712 PF01565 FAD binding domain PA257_6712 PF04030 D-arabinono-1,4-lactone oxidase PA257_6713 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PA257_6716 PF00156 Phosphoribosyl transferase domain PA257_6717 PF03372 Endonuclease/Exonuclease/phosphatase family PA257_6719 PF03725 3' exoribonuclease family, domain 2 PA257_6719 PF01138 3' exoribonuclease family, domain 1 PA257_6720 PF08340 Domain of unknown function (DUF1732) PA257_6720 PF03755 YicC-like family, N-terminal region PA257_6721 PF00625 Guanylate kinase PA257_6722 PF01192 RNA polymerase Rpb6 PA257_6723 PF13291 ACT domain PA257_6723 PF04607 Region found in RelA / SpoT proteins PA257_6723 PF02824 TGS domain PA257_6724 PF01042 Endoribonuclease L-PSP PA257_6730 PF03466 LysR substrate binding domain PA257_6730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_6731 PF17191 RecG wedge domain PA257_6731 PF00271 Helicase conserved C-terminal domain PA257_6731 PF00270 DEAD/DEAH box helicase PA257_6735 PF00216 Bacterial DNA-binding protein PA257_6737 PF18113 Rubredoxin binding C-terminal domain PA257_6737 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_6738 PF00301 Rubredoxin PA257_6739 PF00301 Rubredoxin PA257_6740 PF03928 Haem-degrading PA257_6741 PF02754 Cysteine-rich domain PA257_6741 PF13183 4Fe-4S dicluster domain PA257_6742 PF01565 FAD binding domain PA257_6743 PF02913 FAD linked oxidases, C-terminal domain PA257_6743 PF01565 FAD binding domain PA257_6744 PF00392 Bacterial regulatory proteins, gntR family PA257_6744 PF07729 FCD domain PA257_6745 PF04345 Chorismate lyase PA257_6746 PF01040 UbiA prenyltransferase family PA257_6748 PF00486 Transcriptional regulatory protein, C terminal PA257_6748 PF00072 Response regulator receiver domain PA257_6749 PF00512 His Kinase A (phospho-acceptor) domain PA257_6749 PF11808 Phosphate regulon sensor protein PhoR PA257_6749 PF00989 PAS fold PA257_6749 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_6750 PF01595 Cyclin M transmembrane N-terminal domain PA257_6750 PF03471 Transporter associated domain PA257_6750 PF00571 CBS domain PA257_6751 PF01476 LysM domain PA257_6751 PF08525 Opacity-associated protein A N-terminal motif PA257_6751 PF01551 Peptidase family M23 PA257_6752 PF00072 Response regulator receiver domain PA257_6753 PF01895 PhoU domain PA257_6754 PF00005 ABC transporter PA257_6755 PF00528 Binding-protein-dependent transport system inner membrane component PA257_6756 PF00528 Binding-protein-dependent transport system inner membrane component PA257_6757 PF12849 PBP superfamily domain PA257_6764 PF07690 Major Facilitator Superfamily PA257_6765 PF03061 Thioesterase superfamily PA257_6766 PF05199 GMC oxidoreductase PA257_6766 PF00732 GMC oxidoreductase PA257_6767 PF00171 Aldehyde dehydrogenase family PA257_6768 PF00440 Bacterial regulatory proteins, tetR family PA257_6768 PF13977 BetI-type transcriptional repressor, C-terminal PA257_6770 PF02028 BCCT, betaine/carnitine/choline family transporter PA257_6771 PF00571 CBS domain PA257_6771 PF00005 ABC transporter PA257_6772 PF00528 Binding-protein-dependent transport system inner membrane component PA257_6773 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PA257_6774 PF03315 Serine dehydratase beta chain PA257_6774 PF03313 Serine dehydratase alpha chain PA257_6775 PF01965 DJ-1/PfpI family PA257_6775 PF12833 Helix-turn-helix domain PA257_6777 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_6777 PF03466 LysR substrate binding domain PA257_6778 PF03601 Conserved hypothetical protein 698 PA257_6779 PF07859 alpha/beta hydrolase fold PA257_6781 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PA257_6781 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PA257_6782 PF05853 beta-keto acid cleavage enzyme PA257_6783 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PA257_6785 PF07687 Peptidase dimerisation domain PA257_6785 PF01546 Peptidase family M20/M25/M40 PA257_6787 PF01042 Endoribonuclease L-PSP PA257_6789 PF13091 PLD-like domain PA257_6791 PF01244 Membrane dipeptidase (Peptidase family M19) PA257_6793 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PA257_6794 PF02754 Cysteine-rich domain PA257_6794 PF13183 4Fe-4S dicluster domain PA257_6795 PF01012 Electron transfer flavoprotein domain PA257_6795 PF00766 Electron transfer flavoprotein FAD-binding domain PA257_6798 PF13443 Cro/C1-type HTH DNA-binding domain PA257_6805 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PA257_6805 PF00355 Rieske [2Fe-2S] domain PA257_6806 PF00042 Globin PA257_6806 PF00970 Oxidoreductase FAD-binding domain PA257_6806 PF00175 Oxidoreductase NAD-binding domain PA257_6808 PF01212 Beta-eliminating lyase PA257_6810 PF00464 Serine hydroxymethyltransferase PA257_6811 PF01266 FAD dependent oxidoreductase PA257_6813 PF01571 Aminomethyltransferase folate-binding domain PA257_6813 PF08669 Glycine cleavage T-protein C-terminal barrel domain PA257_6813 PF17806 Sarcosine oxidase A3 domain PA257_6813 PF07992 Pyridine nucleotide-disulphide oxidoreductase PA257_6815 PF00551 Formyl transferase PA257_6816 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PA257_6816 PF08240 Alcohol dehydrogenase GroES-like domain PA257_6817 PF01263 Aldose 1-epimerase PA257_6820 PF02222 ATP-grasp domain PA257_6820 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PA257_6821 PF00731 AIR carboxylase PA257_6823 PF00107 Zinc-binding dehydrogenase PA257_6823 PF08240 Alcohol dehydrogenase GroES-like domain PA257_6824 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_6824 PF03466 LysR substrate binding domain PA257_6825 PF00206 Lyase PA257_6825 PF10415 Fumarase C C-terminus PA257_6827 PF04143 Sulphur transport PA257_6828 PF00392 Bacterial regulatory proteins, gntR family PA257_6828 PF00155 Aminotransferase class I and II PA257_6831 PF03222 Tryptophan/tyrosine permease family PA257_6832 PF00682 HMGL-like PA257_6832 PF00364 Biotin-requiring enzyme PA257_6832 PF02436 Conserved carboxylase domain PA257_6833 PF00289 Biotin carboxylase, N-terminal domain PA257_6833 PF02785 Biotin carboxylase C-terminal domain PA257_6833 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PA257_6834 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PA257_6834 PF03466 LysR substrate binding domain PA257_6836 PF01418 Helix-turn-helix domain, rpiR family PA257_6836 PF01380 SIS domain PA257_6837 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PA257_6837 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PA257_6841 PF00990 Diguanylate cyclase, GGDEF domain PA257_6841 PF00563 EAL domain PA257_6841 PF03707 Bacterial signalling protein N terminal repeat PA257_6842 PF00580 UvrD/REP helicase N-terminal domain PA257_6842 PF13361 UvrD-like helicase C-terminal domain PA257_6843 PF00892 EamA-like transporter family PA257_6844 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PA257_6844 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PA257_6846 PF00534 Glycosyl transferases group 1 PA257_6846 PF13439 Glycosyltransferase Family 4 PA257_6847 PF00534 Glycosyl transferases group 1 PA257_6847 PF13579 Glycosyl transferase 4-like domain PA257_6849 PF00005 ABC transporter PA257_6851 PF00483 Nucleotidyl transferase PA257_6851 PF01050 Mannose-6-phosphate isomerase PA257_6852 PF16363 GDP-mannose 4,6 dehydratase PA257_6853 PF16363 GDP-mannose 4,6 dehydratase PA257_6858 PF01757 Acyltransferase family PA257_6866 PF03547 Membrane transport protein PA257_6868 PF03600 Citrate transporter PA257_6869 PF03741 Integral membrane protein TerC family PA257_6870 PF00472 RF-1 domain PA257_6874 PF02690 Na+/Pi-cotransporter PA257_6877 PF07690 Major Facilitator Superfamily PA257_6880 PF07670 Nucleoside recognition PA257_6881 PF00375 Sodium:dicarboxylate symporter family PA257_6884 PF00158 Sigma-54 interaction domain PA257_6884 PF02954 Bacterial regulatory protein, Fis family PA257_6884 PF00072 Response regulator receiver domain PA257_6885 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB PA257_6885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_6885 PF00672 HAMP domain PA257_6885 PF08448 PAS fold PA257_6885 PF00512 His Kinase A (phospho-acceptor) domain PA257_6886 PF01510 N-acetylmuramoyl-L-alanine amidase PA257_6887 PF01914 MarC family integral membrane protein PA257_6888 PF00072 Response regulator receiver domain PA257_6888 PF00990 Diguanylate cyclase, GGDEF domain PA257_6890 PF01323 DSBA-like thioredoxin domain PA257_6891 PF00034 Cytochrome c PA257_6892 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PA257_6893 PF01926 50S ribosome-binding GTPase PA257_6894 PF01367 5'-3' exonuclease, C-terminal SAM fold PA257_6894 PF00476 DNA polymerase family A PA257_6894 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PA257_6894 PF01612 3'-5' exonuclease PA257_6896 PF01636 Phosphotransferase enzyme family PA257_6899 PF01297 Zinc-uptake complex component A periplasmic PA257_6900 PF01475 Ferric uptake regulator family PA257_6901 PF00005 ABC transporter PA257_6902 PF00950 ABC 3 transport family PA257_6904 PF00005 ABC transporter PA257_6904 PF09383 NIL domain PA257_6905 PF00528 Binding-protein-dependent transport system inner membrane component PA257_6906 PF03180 NLPA lipoprotein PA257_6911 PF00324 Amino acid permease PA257_6912 PF00072 Response regulator receiver domain PA257_6912 PF00158 Sigma-54 interaction domain PA257_6912 PF02954 Bacterial regulatory protein, Fis family PA257_6913 PF02743 Cache domain PA257_6913 PF00512 His Kinase A (phospho-acceptor) domain PA257_6913 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PA257_6916 PF00905 Penicillin binding protein transpeptidase domain PA257_6918 PF08543 Phosphomethylpyrimidine kinase PA257_6920 PF02254 TrkA-N domain PA257_6920 PF00999 Sodium/hydrogen exchanger family PA257_6921 PF03061 Thioesterase superfamily PA257_6924 PF00120 Glutamine synthetase, catalytic domain PA257_6925 PF00202 Aminotransferase class-III PA257_6933 PF00999 Sodium/hydrogen exchanger family PA257_6933 PF02254 TrkA-N domain PA257_6934 PF00083 Sugar (and other) transporter PA257_6936 PF03544 Gram-negative bacterial TonB protein C-terminal PA257_6937 PF02492 CobW/HypB/UreG, nucleotide-binding domain PA257_6937 PF07683 Cobalamin synthesis protein cobW C-terminal domain PA257_6940 PF02492 CobW/HypB/UreG, nucleotide-binding domain PA257_6940 PF07683 Cobalamin synthesis protein cobW C-terminal domain PA257_6941 PF01258 Prokaryotic dksA/traR C4-type zinc finger PA257_6943 PF01520 N-acetylmuramoyl-L-alanine amidase PA257_6944 PF02649 Type I GTP cyclohydrolase folE2 PA257_6946 PF01979 Amidohydrolase family PA257_6950 PF16868 NMT1-like family PA257_6953 PF07690 Major Facilitator Superfamily PA257_6954 PF01380 SIS domain PA257_6955 PF00455 DeoR C terminal sensor domain PA257_6955 PF08220 DeoR-like helix-turn-helix domain PA257_6957 PF12804 MobA-like NTP transferase domain PA257_6957 PF00132 Bacterial transferase hexapeptide (six repeats) PA257_6958 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PA257_6958 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain PA257_6959 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PA257_6959 PF02874 ATP synthase alpha/beta family, beta-barrel domain PA257_6960 PF00231 ATP synthase PA257_6961 PF02874 ATP synthase alpha/beta family, beta-barrel domain PA257_6961 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PA257_6961 PF00306 ATP synthase alpha/beta chain, C terminal domain PA257_6962 PF00213 ATP synthase delta (OSCP) subunit PA257_6963 PF00430 ATP synthase B/B' CF(0) PA257_6964 PF00137 ATP synthase subunit C PA257_6965 PF00119 ATP synthase A chain PA257_6966 PF03899 ATP synthase I chain PA257_6967 PF17762 HTH domain found in ParB protein PA257_6967 PF02195 ParB-like nuclease domain PA257_6968 PF13614 AAA domain PA257_6969 PF02527 rRNA small subunit methyltransferase G PA257_6970 PF01134 Glucose inhibited division protein A PA257_6970 PF13932 GidA associated domain PA257_6973 PF10396 GTP-binding protein TrmE N-terminus PA257_6973 PF12631 MnmE helical domain PA257_6973 PF01926 50S ribosome-binding GTPase PA257_6974 PF02096 60Kd inner membrane protein PA257_6974 PF14849 YidC periplasmic domain PA257_6975 PF00825 Ribonuclease P