PA257_0001	SM00382	ATPases associated with a variety of cellular activities
PA257_0001	SM00760	Bacterial dnaA protein helix-turn-helix domain
PA257_0002	SM00480	DNA polymerase III beta subunit
PA257_0004	SM00387	Histidine kinase-like ATPases
PA257_0004	SM00433	TopoisomeraseII
PA257_0005	SM00487	DEAD-like helicases superfamily
PA257_0005	SM00490	helicase superfamily c-terminal domain
PA257_0015	SM00563	Phosphate acyltransferases
PA257_0018	SM00836	DALR anticodon binding domain
PA257_0024	SM00028	Tetratricopeptide repeats
PA257_0029	SM00257	Lysin motif
PA257_0032	SM00829	Enoylreductase
PA257_0044	SM00421	helix_turn_helix, Lux Regulon
PA257_0044	SM00448	cheY-homologous receiver domain
PA257_0051	SM00912	haemagglutination activity domain
PA257_0053	SM01321	PA257_0053
PA257_0055	SM01321	PA257_0055
PA257_0056	SM01321	PA257_0056
PA257_0067	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_0076	SM00849	Metallo-beta-lactamase superfamily
PA257_0088	SM00729	Elongator protein 3, MiaB family, Radical SAM
PA257_0093	SM00382	ATPases associated with a variety of cellular activities
PA257_0094	SM00220	Serine/Threonine protein kinases, catalytic domain
PA257_0094	SM00327	von Willebrand factor (vWF) type A domain
PA257_0095	SM00331	Sigma factor PP2C-like phosphatases
PA257_0095	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
PA257_0101	SM00240	Forkhead associated domain
PA257_0111	SM00382	ATPases associated with a variety of cellular activities
PA257_0111	SM01086	C-terminal, D2-small domain, of ClpB protein
PA257_0124	SM00947	Carbonic anhydrase
PA257_0143	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_0143	SM00895	PA257_0143
PA257_0144	SM00895	PA257_0144
PA257_0150	SM00769	Water Stress and Hypersensitive response
PA257_0159	SM00382	ATPases associated with a variety of cellular activities
PA257_0177	SM00965	Secretin and TonB N terminus short domain
PA257_0182	SM00346	helix_turn_helix isocitrate lyase regulation
PA257_0190	SM00342	helix_turn_helix, arabinose operon control protein
PA257_0196	SM00267	diguanylate cyclase
PA257_0199	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_0199	SM00331	Sigma factor PP2C-like phosphatases
PA257_0200	SM00448	cheY-homologous receiver domain
PA257_0202	SM00138	Methyltransferase, chemotaxis proteins 
PA257_0203	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_0204	SM00260	Two component signalling adaptor domain
PA257_0205	SM00073	Histidine Phosphotransfer domain
PA257_0205	SM00260	Two component signalling adaptor domain
PA257_0205	SM00387	Histidine kinase-like ATPases
PA257_0205	SM01231	PA257_0205
PA257_0206	SM00448	cheY-homologous receiver domain
PA257_0207	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_0209	SM00822	PA257_0209
PA257_0211	SM00382	ATPases associated with a variety of cellular activities
PA257_0215	SM00014	Acid phosphatase homologues
PA257_0223	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
PA257_0223	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
PA257_0240	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
PA257_0250	SM01130	PA257_0250
PA257_0251	SM01007	Class II Aldolase and Adducin N-terminal domain
PA257_0252	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_0253	SM00882	Coenzyme A transferase
PA257_0254	SM00882	Coenzyme A transferase
PA257_0257	SM00998	Adenylosuccinate lyase C-terminus
PA257_0263	SM00346	helix_turn_helix isocitrate lyase regulation
PA257_0276	SM00342	helix_turn_helix, arabinose operon control protein
PA257_0278	SM00116	Domain in cystathionine beta-synthase and other proteins.
PA257_0281	SM00347	helix_turn_helix multiple antibiotic resistance protein
PA257_0310	SM00857	Resolvase, N terminal domain
PA257_0311	SM00422	helix_turn_helix, mercury resistance
PA257_0315	SM00422	helix_turn_helix, mercury resistance
PA257_0317	SM00052	Putative diguanylate phosphodiesterase
PA257_0318	SM00857	Resolvase, N terminal domain
PA257_0322	SM00857	Resolvase, N terminal domain
PA257_0331	SM00448	cheY-homologous receiver domain
PA257_0332	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_0339	SM00100	Cyclic nucleotide-monophosphate binding domain
PA257_0339	SM00419	helix_turn_helix, cAMP Regulatory protein
PA257_0343	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PA257_0344	SM00382	ATPases associated with a variety of cellular activities
PA257_0350	SM00052	Putative diguanylate phosphodiesterase
PA257_0351	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PA257_0351	SM00091	PAS domain
PA257_0351	SM00267	diguanylate cyclase
PA257_0356	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PA257_0356	SM00091	PAS domain
PA257_0356	SM00267	diguanylate cyclase
PA257_0362	SM01230	PA257_0362
PA257_0364	SM01230	PA257_0364
PA257_0368	SM00382	ATPases associated with a variety of cellular activities
PA257_0373	SM00342	helix_turn_helix, arabinose operon control protein
PA257_0378	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
PA257_0382	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_0395	SM00382	ATPases associated with a variety of cellular activities
PA257_0398	SM00869	Autotransporter beta-domain
PA257_0409	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PA257_0410	SM00091	PAS domain
PA257_0410	SM00267	diguanylate cyclase
PA257_0431	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
PA257_0431	SM01232	PA257_0431
PA257_0432	SM00563	Phosphate acyltransferases
PA257_0434	SM00671	Sel1-like repeats.
PA257_0438	SM00764	Citrate lyase ligase C-terminal domain
PA257_0449	SM00382	ATPases associated with a variety of cellular activities
PA257_0449	SM00962	SRP54-type protein, GTPase domain
PA257_0449	SM00963	SRP54-type protein, helical bundle domain
PA257_0450	SM00382	ATPases associated with a variety of cellular activities
PA257_0462	SM00729	Elongator protein 3, MiaB family, Radical SAM
PA257_0468	SM01152	PA257_0468
PA257_0472	SM00382	ATPases associated with a variety of cellular activities
PA257_0476	SM00116	Domain in cystathionine beta-synthase and other proteins.
PA257_0539	SM00732	Likely ribonuclease with RNase H fold.
PA257_0543	SM00448	cheY-homologous receiver domain
PA257_0544	SM00448	cheY-homologous receiver domain
PA257_0545	SM00260	Two component signalling adaptor domain
PA257_0546	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_0547	SM00138	Methyltransferase, chemotaxis proteins 
PA257_0548	SM00073	Histidine Phosphotransfer domain
PA257_0548	SM00260	Two component signalling adaptor domain
PA257_0548	SM00387	Histidine kinase-like ATPases
PA257_0548	SM00448	cheY-homologous receiver domain
PA257_0548	SM01231	PA257_0548
PA257_0550	SM00260	Two component signalling adaptor domain
PA257_0551	SM00342	helix_turn_helix, arabinose operon control protein
PA257_0559	SM00867	YceI-like domain 
PA257_0560	SM00347	helix_turn_helix multiple antibiotic resistance protein
PA257_0564	SM00487	DEAD-like helicases superfamily
PA257_0564	SM00490	helicase superfamily c-terminal domain
PA257_0568	SM00996	S-adenosyl-L-homocysteine hydrolase
PA257_0568	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
PA257_0590	SM00244	prohibitin homologues
PA257_0591	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_0593	SM00487	DEAD-like helicases superfamily
PA257_0593	SM00490	helicase superfamily c-terminal domain
PA257_0594	SM00357	Cold shock protein domain
PA257_0598	SM00382	ATPases associated with a variety of cellular activities
PA257_0598	SM01086	C-terminal, D2-small domain, of ClpB protein
PA257_0600	SM00563	Phosphate acyltransferases
PA257_0602	SM00448	cheY-homologous receiver domain
PA257_0602	SM00862	Transcriptional regulatory protein, C terminal
PA257_0603	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_0603	SM00387	Histidine kinase-like ATPases
PA257_0603	SM00388	His Kinase A (phosphoacceptor) domain
PA257_0611	SM00965	Secretin and TonB N terminus short domain
PA257_0634	SM00878	Biotin carboxylase C-terminal domain
PA257_0635	SM00796	Allophanate hydrolase subunit 1
PA257_0636	SM00797	Allophanate hydrolase subunit 2
PA257_0639	SM00729	Elongator protein 3, MiaB family, Radical SAM
PA257_0639	SM00876	Biotin and Thiamin Synthesis associated domain
PA257_0652	SM00729	Elongator protein 3, MiaB family, Radical SAM
PA257_0656	SM00344	helix_turn_helix ASNC type
PA257_0666	SM00327	von Willebrand factor (vWF) type A domain
PA257_0668	SM00100	Cyclic nucleotide-monophosphate binding domain
PA257_0668	SM00419	helix_turn_helix, cAMP Regulatory protein
PA257_0675	SM00091	PAS domain
PA257_0675	SM00421	helix_turn_helix, Lux Regulon
PA257_0678	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_0690	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PA257_0691	SM00861	Transketolase, pyrimidine binding domain
PA257_0694	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PA257_0706	SM00342	helix_turn_helix, arabinose operon control protein
PA257_0715	SM01276	PA257_0715
PA257_0722	SM00052	Putative diguanylate phosphodiesterase
PA257_0722	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_0722	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PA257_0722	SM00091	PAS domain
PA257_0722	SM00267	diguanylate cyclase
PA257_0725	SM00400	zinc finger
PA257_0725	SM00493	PA257_0725
PA257_0725	SM00766	DNA primase DnaG DnaB-binding
PA257_0729	SM01207	PA257_0729
PA257_0730	SM00905	Dihydroneopterin aldolase
PA257_0736	SM00763	PrkA AAA domain
PA257_0738	SM00450	Rhodanese Homology Domain
PA257_0741	SM00650	Ribosomal RNA adenine dimethylases
PA257_0747	SM00271	DnaJ molecular chaperone homology domain
PA257_0749	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_0749	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PA257_0749	SM00091	PAS domain
PA257_0749	SM00387	Histidine kinase-like ATPases
PA257_0750	SM00421	helix_turn_helix, Lux Regulon
PA257_0750	SM00448	cheY-homologous receiver domain
PA257_0752	SM00382	ATPases associated with a variety of cellular activities
PA257_0760	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_0787	SM00100	Cyclic nucleotide-monophosphate binding domain
PA257_0787	SM00419	helix_turn_helix, cAMP Regulatory protein
PA257_0792	SM00382	ATPases associated with a variety of cellular activities
PA257_0793	SM00822	PA257_0793
PA257_0797	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PA257_0820	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
PA257_0820	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
PA257_0821	SM00649	Ribosomal protein L11/L12
PA257_0826	SM00663	RNA polymerase I subunit A N-terminus
PA257_0829	SM00838	Elongation factor G C-terminus
PA257_0829	SM00889	Elongation factor G, domain IV
PA257_0831	SM01403	PA257_0831
PA257_0835	SM01382	PA257_0835
PA257_0835	SM01383	PA257_0835
PA257_0838	SM00322	K homology RNA-binding domain
PA257_0842	SM01374	PA257_0842
PA257_0843	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
PA257_0856	SM00363	S4 RNA-binding domain
PA257_0856	SM01390	PA257_0856
PA257_0857	SM00662	RNA polymerases D
PA257_0859	SM01060	PA257_0859
PA257_0865	SM00830	Chorismate mutase type II
PA257_0866	SM00824	Thioesterase
PA257_0868	SM00342	helix_turn_helix, arabinose operon control protein
PA257_0869	SM00823	Phosphopantetheine attachment site
PA257_0872	SM00382	ATPases associated with a variety of cellular activities
PA257_0873	SM00382	ATPases associated with a variety of cellular activities
PA257_0896	SM00849	Metallo-beta-lactamase superfamily
PA257_0899	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PA257_0899	SM00091	PAS domain
PA257_0899	SM00387	Histidine kinase-like ATPases
PA257_0899	SM00388	His Kinase A (phosphoacceptor) domain
PA257_0900	SM00421	helix_turn_helix, Lux Regulon
PA257_0900	SM00448	cheY-homologous receiver domain
PA257_0903	SM01130	PA257_0903
PA257_0907	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_0907	SM00895	PA257_0907
PA257_0908	SM00342	helix_turn_helix, arabinose operon control protein
PA257_0911	SM00873	B3/4 domain
PA257_0925	SM00965	Secretin and TonB N terminus short domain
PA257_0928	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_0935	SM00382	ATPases associated with a variety of cellular activities
PA257_0936	SM00346	helix_turn_helix isocitrate lyase regulation
PA257_0940	SM00287	Bacterial SH3 domain homologues
PA257_0941	SM00829	Enoylreductase
PA257_0943	SM00861	Transketolase, pyrimidine binding domain
PA257_0946	SM00822	PA257_0946
PA257_0948	SM00382	ATPases associated with a variety of cellular activities
PA257_0952	SM00382	ATPases associated with a variety of cellular activities
PA257_0963	SM00347	helix_turn_helix multiple antibiotic resistance protein
PA257_0966	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_0979	SM00342	helix_turn_helix, arabinose operon control protein
PA257_1034	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PA257_1034	SM00387	Histidine kinase-like ATPases
PA257_1034	SM00388	His Kinase A (phosphoacceptor) domain
PA257_1040	SM00073	Histidine Phosphotransfer domain
PA257_1040	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PA257_1040	SM00091	PAS domain
PA257_1040	SM00387	Histidine kinase-like ATPases
PA257_1040	SM00388	His Kinase A (phosphoacceptor) domain
PA257_1040	SM00448	cheY-homologous receiver domain
PA257_1040	SM01079	PA257_1040
PA257_1044	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PA257_1050	SM00829	Enoylreductase
PA257_1053	SM00342	helix_turn_helix, arabinose operon control protein
PA257_1055	SM00903	Flavin reductase like domain
PA257_1058	SM00822	PA257_1058
PA257_1066	SM00912	haemagglutination activity domain
PA257_1068	SM00421	helix_turn_helix, Lux Regulon
PA257_1068	SM00448	cheY-homologous receiver domain
PA257_1070	SM00823	Phosphopantetheine attachment site
PA257_1071	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_1074	SM00421	helix_turn_helix, Lux Regulon
PA257_1079	SM00342	helix_turn_helix, arabinose operon control protein
PA257_1086	SM00382	ATPases associated with a variety of cellular activities
PA257_1106	SM00861	Transketolase, pyrimidine binding domain
PA257_1109	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
PA257_1113	SM00382	ATPases associated with a variety of cellular activities
PA257_1115	SM00091	PAS domain
PA257_1115	SM00387	Histidine kinase-like ATPases
PA257_1115	SM01080	PA257_1115
PA257_1119	SM00448	cheY-homologous receiver domain
PA257_1119	SM00862	Transcriptional regulatory protein, C terminal
PA257_1131	SM00382	ATPases associated with a variety of cellular activities
PA257_1136	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
PA257_1141	SM00464	Found in ATP-dependent protease La (LON)
PA257_1142	SM00014	Acid phosphatase homologues
PA257_1154	SM00936	Penicillin-binding protein 5, C-terminal domain 
PA257_1157	SM00729	Elongator protein 3, MiaB family, Radical SAM
PA257_1169	SM00116	Domain in cystathionine beta-synthase and other proteins.
PA257_1169	SM01091	Transporter associated domain
PA257_1172	SM00729	Elongator protein 3, MiaB family, Radical SAM
PA257_1174	SM00671	Sel1-like repeats.
PA257_1178	SM00387	Histidine kinase-like ATPases
PA257_1178	SM00388	His Kinase A (phosphoacceptor) domain
PA257_1178	SM00448	cheY-homologous receiver domain
PA257_1189	SM00344	helix_turn_helix ASNC type
PA257_1193	SM00487	DEAD-like helicases superfamily
PA257_1193	SM00490	helicase superfamily c-terminal domain
PA257_1193	SM00847	Helicase associated domain (HA2)  Add an annotation
PA257_1197	SM00822	PA257_1197
PA257_1204	SM00487	DEAD-like helicases superfamily
PA257_1204	SM00490	helicase superfamily c-terminal domain
PA257_1207	SM00421	helix_turn_helix, Lux Regulon
PA257_1207	SM00448	cheY-homologous receiver domain
PA257_1209	SM00052	Putative diguanylate phosphodiesterase
PA257_1209	SM00448	cheY-homologous receiver domain
PA257_1210	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_1210	SM00091	PAS domain
PA257_1210	SM00387	Histidine kinase-like ATPases
PA257_1210	SM00388	His Kinase A (phosphoacceptor) domain
PA257_1210	SM00448	cheY-homologous receiver domain
PA257_1216	SM00411	bacterial (prokaryotic) histone like domain
PA257_1218	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_1219	SM00382	ATPases associated with a variety of cellular activities
PA257_1224	SM00382	ATPases associated with a variety of cellular activities
PA257_1230	SM00342	helix_turn_helix, arabinose operon control protein
PA257_1238	SM00421	helix_turn_helix, Lux Regulon
PA257_1241	SM00670	Large family of predicted nucleotide-binding domains
PA257_1242	SM00880	PA257_1242
PA257_1244	SM00226	Low molecular weight phosphatase family
PA257_1248	SM00852	Probable molybdopterin binding domain
PA257_1249	SM00852	Probable molybdopterin binding domain
PA257_1262	SM00965	Secretin and TonB N terminus short domain
PA257_1265	SM00342	helix_turn_helix, arabinose operon control protein
PA257_1273	SM00116	Domain in cystathionine beta-synthase and other proteins.
PA257_1273	SM00382	ATPases associated with a variety of cellular activities
PA257_1286	SM00421	helix_turn_helix, Lux Regulon
PA257_1286	SM00448	cheY-homologous receiver domain
PA257_1287	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_1287	SM00387	Histidine kinase-like ATPases
PA257_1291	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PA257_1296	SM00729	Elongator protein 3, MiaB family, Radical SAM
PA257_1299	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_1303	SM00487	DEAD-like helicases superfamily
PA257_1303	SM00490	helicase superfamily c-terminal domain
PA257_1307	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_1322	SM00829	Enoylreductase
PA257_1323	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PA257_1328	SM00382	ATPases associated with a variety of cellular activities
PA257_1336	SM00342	helix_turn_helix, arabinose operon control protein
PA257_1341	SM00052	Putative diguanylate phosphodiesterase
PA257_1346	SM01323	PA257_1346
PA257_1357	SM00271	DnaJ molecular chaperone homology domain
PA257_1361	SM00562	PA257_1361
PA257_1363	SM00028	Tetratricopeptide repeats
PA257_1364	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_1368	SM00564	beta-propeller repeat
PA257_1376	SM00917	LeuA allosteric (dimerisation) domain
PA257_1388	SM00342	helix_turn_helix, arabinose operon control protein
PA257_1400	SM00421	helix_turn_helix, Lux Regulon
PA257_1401	SM00116	Domain in cystathionine beta-synthase and other proteins.
PA257_1401	SM01240	PA257_1401
PA257_1427	SM00382	ATPases associated with a variety of cellular activities
PA257_1430	SM00342	helix_turn_helix, arabinose operon control protein
PA257_1440	SM00382	ATPases associated with a variety of cellular activities
PA257_1453	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_1454	SM01211	PA257_1454
PA257_1461	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_1461	SM00866	PA257_1461
PA257_1470	SM00116	Domain in cystathionine beta-synthase and other proteins.
PA257_1470	SM01091	Transporter associated domain
PA257_1473	SM00382	ATPases associated with a variety of cellular activities
PA257_1473	SM00962	SRP54-type protein, GTPase domain
PA257_1473	SM00963	SRP54-type protein, helical bundle domain
PA257_1494	SM01322	PA257_1494
PA257_1507	SM00421	helix_turn_helix, Lux Regulon
PA257_1507	SM00448	cheY-homologous receiver domain
PA257_1513	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_1513	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_1514	SM00260	Two component signalling adaptor domain
PA257_1515	SM00138	Methyltransferase, chemotaxis proteins 
PA257_1516	SM00260	Two component signalling adaptor domain
PA257_1517	SM00073	Histidine Phosphotransfer domain
PA257_1517	SM00260	Two component signalling adaptor domain
PA257_1517	SM00387	Histidine kinase-like ATPases
PA257_1517	SM00448	cheY-homologous receiver domain
PA257_1518	SM00448	cheY-homologous receiver domain
PA257_1519	SM00267	diguanylate cyclase
PA257_1519	SM00448	cheY-homologous receiver domain
PA257_1520	SM00937	PA257_1520
PA257_1524	SM01154	PA257_1524
PA257_1528	SM00506	Appr-1"-p processing enzyme
PA257_1532	SM00422	helix_turn_helix, mercury resistance
PA257_1548	SM00563	Phosphate acyltransferases
PA257_1549	SM00382	ATPases associated with a variety of cellular activities
PA257_1563	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PA257_1572	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PA257_1574	SM00935	Outer membrane protein (OmpH-like)
PA257_1581	SM00481	DNA polymerase alpha chain like domain
PA257_1583	SM00977	TilS substrate C-terminal domain
PA257_1586	SM01192	PA257_1586
PA257_1586	SM01193	PA257_1586
PA257_1592	SM00829	Enoylreductase
PA257_1598	SM00257	Lysin motif
PA257_1601	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
PA257_1601	SM00534	ATPase domain of DNA mismatch repair MUTS family
PA257_1657	SM00382	ATPases associated with a variety of cellular activities
PA257_1660	SM00849	Metallo-beta-lactamase superfamily
PA257_1660	SM01027	Beta-Casp domain
PA257_1667	SM00382	ATPases associated with a variety of cellular activities
PA257_1668	SM01144	PA257_1668
PA257_1670	SM00421	helix_turn_helix, Lux Regulon
PA257_1670	SM00448	cheY-homologous receiver domain
PA257_1675	SM00421	helix_turn_helix, Lux Regulon
PA257_1678	SM00342	helix_turn_helix, arabinose operon control protein
PA257_1692	SM00420	helix_turn_helix, Deoxyribose operon repressor
PA257_1692	SM01134	PA257_1692
PA257_1710	SM00342	helix_turn_helix, arabinose operon control protein
PA257_1714	SM00829	Enoylreductase
PA257_1719	SM00354	helix_turn _helix lactose operon repressor
PA257_1723	SM00984	UDP binding domain
PA257_1738	SM00710	Parallel beta-helix repeats
PA257_1738	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
PA257_1740	SM00671	Sel1-like repeats.
PA257_1743	SM00984	UDP binding domain
PA257_1745	SM00382	ATPases associated with a variety of cellular activities
PA257_1748	SM00869	Autotransporter beta-domain
PA257_1749	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PA257_1755	SM00479	PA257_1755
PA257_1766	SM01236	PA257_1766
PA257_1767	SM01236	PA257_1767
PA257_1768	SM00998	Adenylosuccinate lyase C-terminus
PA257_1769	SM00998	Adenylosuccinate lyase C-terminus
PA257_1772	SM00478	endonuclease III
PA257_1772	SM00525	PA257_1772
PA257_1774	SM00900	PA257_1774
PA257_1780	SM00155	Phospholipase D. Active site motifs.
PA257_1791	SM00421	helix_turn_helix, Lux Regulon
PA257_1793	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_1798	SM00919	Malic enzyme, NAD binding domain
PA257_1798	SM01274	PA257_1798
PA257_1804	SM00487	DEAD-like helicases superfamily
PA257_1804	SM00490	helicase superfamily c-terminal domain
PA257_1808	SM00387	Histidine kinase-like ATPases
PA257_1808	SM00388	His Kinase A (phosphoacceptor) domain
PA257_1808	SM00448	cheY-homologous receiver domain
PA257_1812	SM00347	helix_turn_helix multiple antibiotic resistance protein
PA257_1822	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_1824	SM00382	ATPases associated with a variety of cellular activities
PA257_1826	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_1829	SM00382	ATPases associated with a variety of cellular activities
PA257_1833	SM00905	Dihydroneopterin aldolase
PA257_1841	SM01007	Class II Aldolase and Adducin N-terminal domain
PA257_1844	SM00822	PA257_1844
PA257_1848	SM00342	helix_turn_helix, arabinose operon control protein
PA257_1851	SM00421	helix_turn_helix, Lux Regulon
PA257_1853	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
PA257_1855	SM00861	Transketolase, pyrimidine binding domain
PA257_1864	SM00965	Secretin and TonB N terminus short domain
PA257_1866	SM00382	ATPases associated with a variety of cellular activities
PA257_1879	SM00382	ATPases associated with a variety of cellular activities
PA257_1880	SM00710	Parallel beta-helix repeats
PA257_1880	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
PA257_1882	SM00900	PA257_1882
PA257_1889	SM00382	ATPases associated with a variety of cellular activities
PA257_1892	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_1892	SM00866	PA257_1892
PA257_1897	SM00382	ATPases associated with a variety of cellular activities
PA257_1898	SM00382	ATPases associated with a variety of cellular activities
PA257_1900	SM00072	Guanylate kinase homologues.
PA257_1901	SM00849	Metallo-beta-lactamase superfamily
PA257_1909	SM00382	ATPases associated with a variety of cellular activities
PA257_1909	SM01086	C-terminal, D2-small domain, of ClpB protein
PA257_1911	SM01012	PA257_1911
PA257_1918	SM01230	PA257_1918
PA257_1925	SM00858	PA257_1925
PA257_1926	SM00260	Two component signalling adaptor domain
PA257_1926	SM00448	cheY-homologous receiver domain
PA257_1927	SM00138	Methyltransferase, chemotaxis proteins 
PA257_1929	SM00331	Sigma factor PP2C-like phosphatases
PA257_1929	SM00448	cheY-homologous receiver domain
PA257_1931	SM00341	Helicase and RNase D C-terminal
PA257_1931	SM00487	DEAD-like helicases superfamily
PA257_1931	SM00490	helicase superfamily c-terminal domain
PA257_1931	SM00956	PA257_1931
PA257_1932	SM00267	diguanylate cyclase
PA257_1934	SM00347	helix_turn_helix multiple antibiotic resistance protein
PA257_1949	SM00823	Phosphopantetheine attachment site
PA257_1954	SM00422	helix_turn_helix, mercury resistance
PA257_1962	SM00382	ATPases associated with a variety of cellular activities
PA257_1963	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_1965	SM00052	Putative diguanylate phosphodiesterase
PA257_1965	SM00267	diguanylate cyclase
PA257_1969	SM00487	DEAD-like helicases superfamily
PA257_1969	SM00490	helicase superfamily c-terminal domain
PA257_1984	SM00382	ATPases associated with a variety of cellular activities
PA257_1984	SM00487	DEAD-like helicases superfamily
PA257_1984	SM00490	helicase superfamily c-terminal domain
PA257_1984	SM00847	Helicase associated domain (HA2)  Add an annotation
PA257_1985	SM00098	Alkaline phosphatase homologues
PA257_1995	SM00248	ankyrin repeats
PA257_2008	SM00822	PA257_2008
PA257_2013	SM00487	DEAD-like helicases superfamily
PA257_2013	SM00490	helicase superfamily c-terminal domain
PA257_2014	SM00387	Histidine kinase-like ATPases
PA257_2014	SM00388	His Kinase A (phosphoacceptor) domain
PA257_2014	SM00448	cheY-homologous receiver domain
PA257_2016	SM00342	helix_turn_helix, arabinose operon control protein
PA257_2018	SM00563	Phosphate acyltransferases
PA257_2019	SM00357	Cold shock protein domain
PA257_2028	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_2030	SM00671	Sel1-like repeats.
PA257_2031	SM00052	Putative diguanylate phosphodiesterase
PA257_2031	SM00267	diguanylate cyclase
PA257_2032	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PA257_2032	SM00245	tail specific protease
PA257_2033	SM00829	Enoylreductase
PA257_2035	SM00382	ATPases associated with a variety of cellular activities
PA257_2040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_2040	SM00866	PA257_2040
PA257_2057	SM00100	Cyclic nucleotide-monophosphate binding domain
PA257_2057	SM00116	Domain in cystathionine beta-synthase and other proteins.
PA257_2058	SM00479	PA257_2058
PA257_2062	SM00382	ATPases associated with a variety of cellular activities
PA257_2076	SM00342	helix_turn_helix, arabinose operon control protein
PA257_2079	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
PA257_2081	SM00342	helix_turn_helix, arabinose operon control protein
PA257_2084	SM00382	ATPases associated with a variety of cellular activities
PA257_2090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_2090	SM00387	Histidine kinase-like ATPases
PA257_2090	SM00388	His Kinase A (phosphoacceptor) domain
PA257_2092	SM00448	cheY-homologous receiver domain
PA257_2092	SM00862	Transcriptional regulatory protein, C terminal
PA257_2096	SM00481	DNA polymerase alpha chain like domain
PA257_2102	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PA257_2106	SM00448	cheY-homologous receiver domain
PA257_2106	SM00862	Transcriptional regulatory protein, C terminal
PA257_2107	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_2107	SM00387	Histidine kinase-like ATPases
PA257_2107	SM00388	His Kinase A (phosphoacceptor) domain
PA257_2111	SM00382	ATPases associated with a variety of cellular activities
PA257_2121	SM00363	S4 RNA-binding domain
PA257_2123	SM00267	diguanylate cyclase
PA257_2127	SM00346	helix_turn_helix isocitrate lyase regulation
PA257_2133	SM00434	DNA Topoisomerase IV
PA257_2135	SM00830	Chorismate mutase type II
PA257_2139	SM00316	Ribosomal protein S1-like RNA-binding domain
PA257_2140	SM00411	bacterial (prokaryotic) histone like domain
PA257_2151	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PA257_2154	SM00487	DEAD-like helicases superfamily
PA257_2154	SM00490	helicase superfamily c-terminal domain
PA257_2178	SM01329	PA257_2178
PA257_2179	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PA257_2180	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PA257_2181	SM00257	Lysin motif
PA257_2206	SM00342	helix_turn_helix, arabinose operon control protein
PA257_2224	SM00387	Histidine kinase-like ATPases
PA257_2224	SM00388	His Kinase A (phosphoacceptor) domain
PA257_2225	SM00448	cheY-homologous receiver domain
PA257_2225	SM00862	Transcriptional regulatory protein, C terminal
PA257_2228	SM00028	Tetratricopeptide repeats
PA257_2229	SM00327	von Willebrand factor (vWF) type A domain
PA257_2243	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_2251	SM00981	PA257_2251
PA257_2254	SM00421	helix_turn_helix, Lux Regulon
PA257_2254	SM00448	cheY-homologous receiver domain
PA257_2255	SM00073	Histidine Phosphotransfer domain
PA257_2255	SM00387	Histidine kinase-like ATPases
PA257_2255	SM00388	His Kinase A (phosphoacceptor) domain
PA257_2255	SM00448	cheY-homologous receiver domain
PA257_2256	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PA257_2263	SM00849	Metallo-beta-lactamase superfamily
PA257_2272	SM00852	Probable molybdopterin binding domain
PA257_2273	SM00852	Probable molybdopterin binding domain
PA257_2275	SM00342	helix_turn_helix, arabinose operon control protein
PA257_2279	SM00046	Diacylglycerol kinase catalytic domain (presumed)
PA257_2284	SM00382	ATPases associated with a variety of cellular activities
PA257_2292	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
PA257_2292	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
PA257_2292	SM00493	PA257_2292
PA257_2301	SM00487	DEAD-like helicases superfamily
PA257_2301	SM00490	helicase superfamily c-terminal domain
PA257_2301	SM00982	PA257_2301
PA257_2301	SM01058	CarD-like/TRCF domain
PA257_2302	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PA257_2306	SM00900	PA257_2306
PA257_2317	SM00382	ATPases associated with a variety of cellular activities
PA257_2320	SM00849	Metallo-beta-lactamase superfamily
PA257_2326	SM00226	Low molecular weight phosphatase family
PA257_2328	SM00316	Ribosomal protein S1-like RNA-binding domain
PA257_2330	SM00363	S4 RNA-binding domain
PA257_2337	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
PA257_2338	SM00822	PA257_2338
PA257_2339	SM00823	Phosphopantetheine attachment site
PA257_2341	SM00825	Beta-ketoacyl synthase
PA257_2350	SM00729	Elongator protein 3, MiaB family, Radical SAM
PA257_2354	SM00893	Electron transfer flavoprotein domain
PA257_2355	SM00893	Electron transfer flavoprotein domain
PA257_2363	SM00833	Cobalamin synthesis protein cobW C-terminal domain
PA257_2367	SM00382	ATPases associated with a variety of cellular activities
PA257_2384	SM00382	ATPases associated with a variety of cellular activities
PA257_2387	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_2390	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_2390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_2392	SM00822	PA257_2392
PA257_2393	SM00342	helix_turn_helix, arabinose operon control protein
PA257_2395	SM00849	Metallo-beta-lactamase superfamily
PA257_2398	SM00382	ATPases associated with a variety of cellular activities
PA257_2408	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_2411	SM00421	helix_turn_helix, Lux Regulon
PA257_2411	SM00448	cheY-homologous receiver domain
PA257_2413	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_2419	SM00878	Biotin carboxylase C-terminal domain
PA257_2423	SM00822	PA257_2423
PA257_2428	SM00387	Histidine kinase-like ATPases
PA257_2429	SM00448	cheY-homologous receiver domain
PA257_2434	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
PA257_2437	SM00460	Transglutaminase/protease-like homologues
PA257_2438	SM00880	PA257_2438
PA257_2440	SM00267	diguanylate cyclase
PA257_2443	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_2443	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_2455	SM00382	ATPases associated with a variety of cellular activities
PA257_2462	SM00841	Elongation factor P, C-terminal
PA257_2462	SM01185	PA257_2462
PA257_2464	SM00347	helix_turn_helix multiple antibiotic resistance protein
PA257_2476	SM00487	DEAD-like helicases superfamily
PA257_2476	SM00490	helicase superfamily c-terminal domain
PA257_2492	SM00347	helix_turn_helix multiple antibiotic resistance protein
PA257_2493	SM00387	Histidine kinase-like ATPases
PA257_2493	SM00388	His Kinase A (phosphoacceptor) domain
PA257_2493	SM00448	cheY-homologous receiver domain
PA257_2505	SM00966	SpoVT / AbrB like domain 
PA257_2513	SM00411	bacterial (prokaryotic) histone like domain
PA257_2514	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_2542	SM00342	helix_turn_helix, arabinose operon control protein
PA257_2546	SM00829	Enoylreductase
PA257_2548	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_2549	SM00836	DALR anticodon binding domain
PA257_2549	SM01016	Arginyl tRNA synthetase N terminal dom
PA257_2553	SM00388	His Kinase A (phosphoacceptor) domain
PA257_2558	SM00382	ATPases associated with a variety of cellular activities
PA257_2564	SM00829	Enoylreductase
PA257_2582	SM00857	Resolvase, N terminal domain
PA257_2584	SM00422	helix_turn_helix, mercury resistance
PA257_2589	SM00422	helix_turn_helix, mercury resistance
PA257_2592	SM00342	helix_turn_helix, arabinose operon control protein
PA257_2598	SM00857	Resolvase, N terminal domain
PA257_2603	SM00836	DALR anticodon binding domain
PA257_2603	SM01016	Arginyl tRNA synthetase N terminal dom
PA257_2615	SM00487	DEAD-like helicases superfamily
PA257_2633	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
PA257_2633	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
PA257_2633	SM00493	PA257_2633
PA257_2656	SM00100	Cyclic nucleotide-monophosphate binding domain
PA257_2662	SM00382	ATPases associated with a variety of cellular activities
PA257_2664	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_2664	SM00387	Histidine kinase-like ATPases
PA257_2664	SM00388	His Kinase A (phosphoacceptor) domain
PA257_2665	SM00448	cheY-homologous receiver domain
PA257_2665	SM00862	Transcriptional regulatory protein, C terminal
PA257_2672	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_2672	SM00866	PA257_2672
PA257_2676	SM00331	Sigma factor PP2C-like phosphatases
PA257_2676	SM00448	cheY-homologous receiver domain
PA257_2717	SM00232	JAB/MPN domain
PA257_2722	SM01040	BRO family, N-terminal domain
PA257_2742	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_2745	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_2761	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PA257_2761	SM00267	diguanylate cyclase
PA257_2790	SM00318	Staphylococcal nuclease homologues
PA257_2800	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
PA257_2805	SM00873	B3/4 domain
PA257_2805	SM00874	tRNA synthetase B5 domain
PA257_2805	SM00896	Ferredoxin-fold anticodon binding domain
PA257_2806	SM00411	bacterial (prokaryotic) histone like domain
PA257_2807	SM00422	helix_turn_helix, mercury resistance
PA257_2809	SM00487	DEAD-like helicases superfamily
PA257_2809	SM00490	helicase superfamily c-terminal domain
PA257_2818	SM00220	Serine/Threonine protein kinases, catalytic domain
PA257_2820	SM00382	ATPases associated with a variety of cellular activities
PA257_2820	SM01086	C-terminal, D2-small domain, of ClpB protein
PA257_2829	SM00422	helix_turn_helix, mercury resistance
PA257_2833	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PA257_2841	SM00382	ATPases associated with a variety of cellular activities
PA257_2844	SM00342	helix_turn_helix, arabinose operon control protein
PA257_2854	SM00342	helix_turn_helix, arabinose operon control protein
PA257_2863	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_2863	SM00387	Histidine kinase-like ATPases
PA257_2863	SM00388	His Kinase A (phosphoacceptor) domain
PA257_2864	SM00448	cheY-homologous receiver domain
PA257_2864	SM00862	Transcriptional regulatory protein, C terminal
PA257_2872	SM00829	Enoylreductase
PA257_2875	SM00382	ATPases associated with a variety of cellular activities
PA257_2887	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PA257_2887	SM00382	ATPases associated with a variety of cellular activities
PA257_2896	SM00448	cheY-homologous receiver domain
PA257_2896	SM00862	Transcriptional regulatory protein, C terminal
PA257_2897	SM00387	Histidine kinase-like ATPases
PA257_2899	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_2899	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_2902	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_2902	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_2902	SM01049	PA257_2902
PA257_2912	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PA257_2912	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
PA257_2914	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
PA257_2925	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
PA257_2932	SM01329	PA257_2932
PA257_2933	SM00357	Cold shock protein domain
PA257_2935	SM00382	ATPases associated with a variety of cellular activities
PA257_2935	SM01086	C-terminal, D2-small domain, of ClpB protein
PA257_2936	SM00316	Ribosomal protein S1-like RNA-binding domain
PA257_2941	SM00843	PA257_2941
PA257_2943	SM00382	ATPases associated with a variety of cellular activities
PA257_2954	SM00450	Rhodanese Homology Domain
PA257_2958	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_2961	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_2962	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_2963	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_2967	SM00421	helix_turn_helix, Lux Regulon
PA257_2968	SM00965	Secretin and TonB N terminus short domain
PA257_2970	SM00342	helix_turn_helix, arabinose operon control protein
PA257_2973	SM00421	helix_turn_helix, Lux Regulon
PA257_2973	SM00448	cheY-homologous receiver domain
PA257_2974	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PA257_2974	SM00465	GIY-YIG type nucleases (URI domain)
PA257_2979	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_2979	SM00387	Histidine kinase-like ATPases
PA257_2979	SM00388	His Kinase A (phosphoacceptor) domain
PA257_2979	SM00448	cheY-homologous receiver domain
PA257_2980	SM00945	ProQ/FINO family
PA257_2986	SM00344	helix_turn_helix ASNC type
PA257_2990	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_2990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_2991	SM00448	cheY-homologous receiver domain
PA257_2992	SM00387	Histidine kinase-like ATPases
PA257_2998	SM00052	Putative diguanylate phosphodiesterase
PA257_2998	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PA257_2998	SM00267	diguanylate cyclase
PA257_3005	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_3005	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_3012	SM00342	helix_turn_helix, arabinose operon control protein
PA257_3014	SM00822	PA257_3014
PA257_3030	SM00195	Dual specificity phosphatase, catalytic domain
PA257_3032	SM00563	Phosphate acyltransferases
PA257_3047	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_3047	SM00387	Histidine kinase-like ATPases
PA257_3047	SM00388	His Kinase A (phosphoacceptor) domain
PA257_3048	SM00448	cheY-homologous receiver domain
PA257_3048	SM00862	Transcriptional regulatory protein, C terminal
PA257_3052	SM00342	helix_turn_helix, arabinose operon control protein
PA257_3061	SM00342	helix_turn_helix, arabinose operon control protein
PA257_3064	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
PA257_3071	SM00364	Leucine-rich repeats, bacterial type
PA257_3071	SM00369	Leucine-rich repeats, typical (most populated) subfamily
PA257_3075	SM00248	ankyrin repeats
PA257_3082	SM00829	Enoylreductase
PA257_3084	SM00342	helix_turn_helix, arabinose operon control protein
PA257_3085	SM00342	helix_turn_helix, arabinose operon control protein
PA257_3094	SM00387	Histidine kinase-like ATPases
PA257_3094	SM00388	His Kinase A (phosphoacceptor) domain
PA257_3095	SM00448	cheY-homologous receiver domain
PA257_3095	SM00862	Transcriptional regulatory protein, C terminal
PA257_3109	SM00965	Secretin and TonB N terminus short domain
PA257_3113	SM00912	haemagglutination activity domain
PA257_3180	SM00382	ATPases associated with a variety of cellular activities
PA257_3190	SM00244	prohibitin homologues
PA257_3191	SM00244	prohibitin homologues
PA257_3192	SM00244	prohibitin homologues
PA257_3204	SM01006	Siderophore biosynthesis protein domain
PA257_3207	SM00823	Phosphopantetheine attachment site
PA257_3209	SM01040	BRO family, N-terminal domain
PA257_3228	SM00923	MbtH-like protein
PA257_3232	SM00382	ATPases associated with a variety of cellular activities
PA257_3238	SM00823	Phosphopantetheine attachment site
PA257_3239	SM00823	Phosphopantetheine attachment site
PA257_3241	SM00965	Secretin and TonB N terminus short domain
PA257_3242	SM00382	ATPases associated with a variety of cellular activities
PA257_3250	SM00382	ATPases associated with a variety of cellular activities
PA257_3262	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
PA257_3265	SM00421	helix_turn_helix, Lux Regulon
PA257_3265	SM00448	cheY-homologous receiver domain
PA257_3271	SM00382	ATPases associated with a variety of cellular activities
PA257_3284	SM00382	ATPases associated with a variety of cellular activities
PA257_3290	SM00382	ATPases associated with a variety of cellular activities
PA257_3294	SM00382	ATPases associated with a variety of cellular activities
PA257_3294	SM00930	PA257_3294
PA257_3304	SM00382	ATPases associated with a variety of cellular activities
PA257_3308	SM00342	helix_turn_helix, arabinose operon control protein
PA257_3309	SM00342	helix_turn_helix, arabinose operon control protein
PA257_3312	SM00382	ATPases associated with a variety of cellular activities
PA257_3322	SM00354	helix_turn _helix lactose operon repressor
PA257_3331	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_3336	SM00382	ATPases associated with a variety of cellular activities
PA257_3342	SM00823	Phosphopantetheine attachment site
PA257_3342	SM00824	Thioesterase
PA257_3344	SM00060	Fibronectin type 3 domain
PA257_3344	SM00495	Chitin-binding domain type 3
PA257_3345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_3345	SM00866	PA257_3345
PA257_3349	SM00567	E-Z type HEAT repeats
PA257_3353	SM00564	beta-propeller repeat
PA257_3363	SM00342	helix_turn_helix, arabinose operon control protein
PA257_3365	SM00226	Low molecular weight phosphatase family
PA257_3367	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PA257_3368	SM00342	helix_turn_helix, arabinose operon control protein
PA257_3369	SM00829	Enoylreductase
PA257_3371	SM00422	helix_turn_helix, mercury resistance
PA257_3385	SM00354	helix_turn _helix lactose operon repressor
PA257_3393	SM00870	PA257_3393
PA257_3399	SM00861	Transketolase, pyrimidine binding domain
PA257_3401	SM00344	helix_turn_helix ASNC type
PA257_3421	SM00342	helix_turn_helix, arabinose operon control protein
PA257_3508	SM00091	PAS domain
PA257_3508	SM00382	ATPases associated with a variety of cellular activities
PA257_3514	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
PA257_3525	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_3525	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
PA257_3529	SM00052	Putative diguanylate phosphodiesterase
PA257_3532	SM00829	Enoylreductase
PA257_3538	SM00116	Domain in cystathionine beta-synthase and other proteins.
PA257_3544	SM01236	PA257_3544
PA257_3548	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PA257_3548	SM00091	PAS domain
PA257_3548	SM00387	Histidine kinase-like ATPases
PA257_3548	SM00388	His Kinase A (phosphoacceptor) domain
PA257_3548	SM00448	cheY-homologous receiver domain
PA257_3562	SM00642	Alpha-amylase domain
PA257_3564	SM00642	Alpha-amylase domain
PA257_3566	SM00642	Alpha-amylase domain
PA257_3568	SM00116	Domain in cystathionine beta-synthase and other proteins.
PA257_3569	SM00829	Enoylreductase
PA257_3572	SM00155	Phospholipase D. Active site motifs.
PA257_3574	SM00642	Alpha-amylase domain
PA257_3575	SM00642	Alpha-amylase domain
PA257_3576	SM00642	Alpha-amylase domain
PA257_3577	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
PA257_3581	SM01060	PA257_3581
PA257_3588	SM00822	PA257_3588
PA257_3598	SM00052	Putative diguanylate phosphodiesterase
PA257_3607	SM00470	ParB-like nuclease domain
PA257_3618	SM00342	helix_turn_helix, arabinose operon control protein
PA257_3627	SM00796	Allophanate hydrolase subunit 1
PA257_3628	SM00797	Allophanate hydrolase subunit 2
PA257_3632	SM00822	PA257_3632
PA257_3635	SM00342	helix_turn_helix, arabinose operon control protein
PA257_3642	SM00965	Secretin and TonB N terminus short domain
PA257_3649	SM00344	helix_turn_helix ASNC type
PA257_3660	SM00052	Putative diguanylate phosphodiesterase
PA257_3660	SM00091	PAS domain
PA257_3660	SM00267	diguanylate cyclase
PA257_3661	SM00838	Elongation factor G C-terminus
PA257_3661	SM00889	Elongation factor G, domain IV
PA257_3672	SM00382	ATPases associated with a variety of cellular activities
PA257_3676	SM00965	Secretin and TonB N terminus short domain
PA257_3680	SM00947	Carbonic anhydrase
PA257_3681	SM01116	PA257_3681
PA257_3687	SM00342	helix_turn_helix, arabinose operon control protein
PA257_3689	SM01234	PA257_3689
PA257_3696	SM01230	PA257_3696
PA257_3704	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_3709	SM00344	helix_turn_helix ASNC type
PA257_3715	SM00984	UDP binding domain
PA257_3722	SM00422	helix_turn_helix, mercury resistance
PA257_3727	SM00878	Biotin carboxylase C-terminal domain
PA257_3729	SM00346	helix_turn_helix isocitrate lyase regulation
PA257_3734	SM00091	PAS domain
PA257_3734	SM00382	ATPases associated with a variety of cellular activities
PA257_3739	SM00882	Coenzyme A transferase
PA257_3740	SM00882	Coenzyme A transferase
PA257_3747	SM00387	Histidine kinase-like ATPases
PA257_3747	SM00388	His Kinase A (phosphoacceptor) domain
PA257_3747	SM00448	cheY-homologous receiver domain
PA257_3750	SM00729	Elongator protein 3, MiaB family, Radical SAM
PA257_3758	SM00564	beta-propeller repeat
PA257_3760	SM00421	helix_turn_helix, Lux Regulon
PA257_3760	SM00448	cheY-homologous receiver domain
PA257_3761	SM00387	Histidine kinase-like ATPases
PA257_3763	SM00421	helix_turn_helix, Lux Regulon
PA257_3763	SM00448	cheY-homologous receiver domain
PA257_3765	SM00091	PAS domain
PA257_3765	SM00387	Histidine kinase-like ATPases
PA257_3765	SM00388	His Kinase A (phosphoacceptor) domain
PA257_3765	SM00448	cheY-homologous receiver domain
PA257_3766	SM00897	FIST N domain
PA257_3766	SM01204	PA257_3766
PA257_3778	SM00382	ATPases associated with a variety of cellular activities
PA257_3793	SM00354	helix_turn _helix lactose operon repressor
PA257_3795	SM00382	ATPases associated with a variety of cellular activities
PA257_3798	SM00382	ATPases associated with a variety of cellular activities
PA257_3808	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
PA257_3809	SM01092	CO dehydrogenase flavoprotein C-terminal domain
PA257_3811	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PA257_3811	SM00091	PAS domain
PA257_3811	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_3836	SM00965	Secretin and TonB N terminus short domain
PA257_3849	SM00421	helix_turn_helix, Lux Regulon
PA257_3863	SM00486	DNA polymerase type-B family
PA257_3865	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_3869	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
PA257_3870	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_3873	SM00382	ATPases associated with a variety of cellular activities
PA257_3881	SM00823	Phosphopantetheine attachment site
PA257_3885	SM00491	PA257_3885
PA257_3886	SM00990	PA257_3886
PA257_3891	SM00382	ATPases associated with a variety of cellular activities
PA257_3900	SM00116	Domain in cystathionine beta-synthase and other proteins.
PA257_3903	SM00267	diguanylate cyclase
PA257_3905	SM00342	helix_turn_helix, arabinose operon control protein
PA257_3912	SM01018	B12 binding domain
PA257_3925	SM00829	Enoylreductase
PA257_3927	SM00855	Phosphoglycerate mutase family
PA257_3931	SM00822	PA257_3931
PA257_3943	SM00479	PA257_3943
PA257_3946	SM00849	Metallo-beta-lactamase superfamily
PA257_3947	SM00257	Lysin motif
PA257_3952	SM00382	ATPases associated with a variety of cellular activities
PA257_3956	SM00411	bacterial (prokaryotic) histone like domain
PA257_3957	SM00382	ATPases associated with a variety of cellular activities
PA257_3957	SM00464	Found in ATP-dependent protease La (LON)
PA257_3958	SM00382	ATPases associated with a variety of cellular activities
PA257_3958	SM00994	ClpX C4-type zinc finger
PA257_3958	SM01086	C-terminal, D2-small domain, of ClpB protein
PA257_3962	SM00448	cheY-homologous receiver domain
PA257_3962	SM00862	Transcriptional regulatory protein, C terminal
PA257_3963	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_3963	SM00387	Histidine kinase-like ATPases
PA257_3963	SM00388	His Kinase A (phosphoacceptor) domain
PA257_3974	SM00840	PA257_3974
PA257_3985	SM00448	cheY-homologous receiver domain
PA257_3985	SM01012	PA257_3985
PA257_3989	SM00220	Serine/Threonine protein kinases, catalytic domain
PA257_3989	SM00331	Sigma factor PP2C-like phosphatases
PA257_3989	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
PA257_3992	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PA257_4013	SM00421	helix_turn_helix, Lux Regulon
PA257_4014	SM00421	helix_turn_helix, Lux Regulon
PA257_4028	SM00506	Appr-1"-p processing enzyme
PA257_4042	SM00460	Transglutaminase/protease-like homologues
PA257_4047	SM00052	Putative diguanylate phosphodiesterase
PA257_4047	SM00267	diguanylate cyclase
PA257_4048	SM01217	PA257_4048
PA257_4061	SM00342	helix_turn_helix, arabinose operon control protein
PA257_4077	SM00382	ATPases associated with a variety of cellular activities
PA257_4088	SM00478	endonuclease III
PA257_4088	SM01009	AlkA N-terminal domain
PA257_4092	SM01007	Class II Aldolase and Adducin N-terminal domain
PA257_4100	SM00463	Small MutS-related domain
PA257_4104	SM00220	Serine/Threonine protein kinases, catalytic domain
PA257_4105	SM00331	Sigma factor PP2C-like phosphatases
PA257_4105	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
PA257_4112	SM00382	ATPases associated with a variety of cellular activities
PA257_4113	SM00382	ATPases associated with a variety of cellular activities
PA257_4113	SM01086	C-terminal, D2-small domain, of ClpB protein
PA257_4127	SM00347	helix_turn_helix multiple antibiotic resistance protein
PA257_4132	SM00829	Enoylreductase
PA257_4135	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_4135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_4135	SM01358	PA257_4135
PA257_4137	SM00903	Flavin reductase like domain
PA257_4139	SM00450	Rhodanese Homology Domain
PA257_4145	SM00448	cheY-homologous receiver domain
PA257_4145	SM00862	Transcriptional regulatory protein, C terminal
PA257_4146	SM00387	Histidine kinase-like ATPases
PA257_4146	SM00388	His Kinase A (phosphoacceptor) domain
PA257_4152	SM00346	helix_turn_helix isocitrate lyase regulation
PA257_4155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_4155	SM00895	PA257_4155
PA257_4163	SM00342	helix_turn_helix, arabinose operon control protein
PA257_4166	SM00855	Phosphoglycerate mutase family
PA257_4171	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_4171	SM00387	Histidine kinase-like ATPases
PA257_4171	SM00388	His Kinase A (phosphoacceptor) domain
PA257_4171	SM00448	cheY-homologous receiver domain
PA257_4173	SM00825	Beta-ketoacyl synthase
PA257_4174	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_4174	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_4179	SM00347	helix_turn_helix multiple antibiotic resistance protein
PA257_4181	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
PA257_4183	SM00342	helix_turn_helix, arabinose operon control protein
PA257_4186	SM00387	Histidine kinase-like ATPases
PA257_4194	SM00881	CoA binding domain
PA257_4198	SM00861	Transketolase, pyrimidine binding domain
PA257_4209	SM00479	PA257_4209
PA257_4220	SM01230	PA257_4220
PA257_4225	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_4242	SM00729	Elongator protein 3, MiaB family, Radical SAM
PA257_4244	SM00100	Cyclic nucleotide-monophosphate binding domain
PA257_4244	SM00419	helix_turn_helix, cAMP Regulatory protein
PA257_4251	SM00822	PA257_4251
PA257_4254	SM00493	PA257_4254
PA257_4256	SM00382	ATPases associated with a variety of cellular activities
PA257_4259	SM00292	breast cancer carboxy-terminal domain
PA257_4259	SM00532	Ligase N family
PA257_4260	SM00771	ZipA, C-terminal domain (FtsZ-binding)
PA257_4261	SM00968	SMC proteins Flexible Hinge Domain
PA257_4262	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_4262	SM00895	PA257_4262
PA257_4265	SM01092	CO dehydrogenase flavoprotein C-terminal domain
PA257_4266	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
PA257_4269	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_4269	SM00895	PA257_4269
PA257_4288	SM00729	Elongator protein 3, MiaB family, Radical SAM
PA257_4303	SM00420	helix_turn_helix, Deoxyribose operon repressor
PA257_4303	SM01134	PA257_4303
PA257_4309	SM00421	helix_turn_helix, Lux Regulon
PA257_4311	SM00028	Tetratricopeptide repeats
PA257_4319	SM00382	ATPases associated with a variety of cellular activities
PA257_4323	SM00822	PA257_4323
PA257_4329	SM00260	Two component signalling adaptor domain
PA257_4330	SM00260	Two component signalling adaptor domain
PA257_4334	SM00448	cheY-homologous receiver domain
PA257_4335	SM00073	Histidine Phosphotransfer domain
PA257_4335	SM00260	Two component signalling adaptor domain
PA257_4335	SM00387	Histidine kinase-like ATPases
PA257_4335	SM01231	PA257_4335
PA257_4337	SM00448	cheY-homologous receiver domain
PA257_4340	SM00382	ATPases associated with a variety of cellular activities
PA257_4340	SM00962	SRP54-type protein, GTPase domain
PA257_4355	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_4355	SM00387	Histidine kinase-like ATPases
PA257_4355	SM00388	His Kinase A (phosphoacceptor) domain
PA257_4356	SM00448	cheY-homologous receiver domain
PA257_4356	SM00862	Transcriptional regulatory protein, C terminal
PA257_4360	SM00052	Putative diguanylate phosphodiesterase
PA257_4360	SM00267	diguanylate cyclase
PA257_4360	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_4363	SM00421	helix_turn_helix, Lux Regulon
PA257_4365	SM00831	Cation transporter/ATPase, N-terminus
PA257_4368	SM00382	ATPases associated with a variety of cellular activities
PA257_4370	SM01144	PA257_4370
PA257_4371	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PA257_4371	SM00091	PAS domain
PA257_4371	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_4379	SM00849	Metallo-beta-lactamase superfamily
PA257_4395	SM00878	Biotin carboxylase C-terminal domain
PA257_4398	SM00421	helix_turn_helix, Lux Regulon
PA257_4398	SM00448	cheY-homologous receiver domain
PA257_4399	SM00387	Histidine kinase-like ATPases
PA257_4399	SM00388	His Kinase A (phosphoacceptor) domain
PA257_4399	SM00448	cheY-homologous receiver domain
PA257_4416	SM00342	helix_turn_helix, arabinose operon control protein
PA257_4423	SM00825	Beta-ketoacyl synthase
PA257_4426	SM00965	Secretin and TonB N terminus short domain
PA257_4432	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_4446	SM00421	helix_turn_helix, Lux Regulon
PA257_4451	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_4454	SM00382	ATPases associated with a variety of cellular activities
PA257_4456	SM00870	PA257_4456
PA257_4457	SM00387	Histidine kinase-like ATPases
PA257_4457	SM00388	His Kinase A (phosphoacceptor) domain
PA257_4458	SM00382	ATPases associated with a variety of cellular activities
PA257_4458	SM00448	cheY-homologous receiver domain
PA257_4464	SM01091	Transporter associated domain
PA257_4465	SM00822	PA257_4465
PA257_4468	SM00477	DNA/RNA non-specific endonuclease
PA257_4468	SM00892	DNA/RNA non-specific endonuclease
PA257_4495	SM00965	Secretin and TonB N terminus short domain
PA257_4503	SM00341	Helicase and RNase D C-terminal
PA257_4503	SM00474	3'-5' exonuclease
PA257_4506	SM00450	Rhodanese Homology Domain
PA257_4513	SM00347	helix_turn_helix multiple antibiotic resistance protein
PA257_4518	SM00855	Phosphoglycerate mutase family
PA257_4529	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_4529	SM00895	PA257_4529
PA257_4536	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_4538	SM00342	helix_turn_helix, arabinose operon control protein
PA257_4539	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_4543	SM00382	ATPases associated with a variety of cellular activities
PA257_4545	SM01130	PA257_4545
PA257_4548	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_4548	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_4550	SM00235	Zinc-dependent metalloprotease
PA257_4554	SM00382	ATPases associated with a variety of cellular activities
PA257_4557	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PA257_4557	SM00091	PAS domain
PA257_4557	SM00387	Histidine kinase-like ATPases
PA257_4557	SM00388	His Kinase A (phosphoacceptor) domain
PA257_4557	SM00448	cheY-homologous receiver domain
PA257_4566	SM00342	helix_turn_helix, arabinose operon control protein
PA257_4572	SM00342	helix_turn_helix, arabinose operon control protein
PA257_4584	SM00925	MltA specific insert domain
PA257_4597	SM00450	Rhodanese Homology Domain
PA257_4610	SM00382	ATPases associated with a variety of cellular activities
PA257_4615	SM00271	DnaJ molecular chaperone homology domain
PA257_4617	SM00731	SprT homologues.
PA257_4625	SM00342	helix_turn_helix, arabinose operon control protein
PA257_4626	SM00052	Putative diguanylate phosphodiesterase
PA257_4626	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PA257_4626	SM00091	PAS domain
PA257_4626	SM00267	diguanylate cyclase
PA257_4627	SM00387	Histidine kinase-like ATPases
PA257_4627	SM00388	His Kinase A (phosphoacceptor) domain
PA257_4628	SM00448	cheY-homologous receiver domain
PA257_4628	SM00862	Transcriptional regulatory protein, C terminal
PA257_4633	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PA257_4648	SM00357	Cold shock protein domain
PA257_4649	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_4649	SM00387	Histidine kinase-like ATPases
PA257_4649	SM00388	His Kinase A (phosphoacceptor) domain
PA257_4650	SM00448	cheY-homologous receiver domain
PA257_4650	SM00862	Transcriptional regulatory protein, C terminal
PA257_4654	SM01321	PA257_4654
PA257_4655	SM01040	BRO family, N-terminal domain
PA257_4667	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_4667	SM00866	PA257_4667
PA257_4672	SM00829	Enoylreductase
PA257_4673	SM00421	helix_turn_helix, Lux Regulon
PA257_4685	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PA257_4691	SM00267	diguanylate cyclase
PA257_4691	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_4695	SM00316	Ribosomal protein S1-like RNA-binding domain
PA257_4698	SM00382	ATPases associated with a variety of cellular activities
PA257_4704	SM00363	S4 RNA-binding domain
PA257_4705	SM00342	helix_turn_helix, arabinose operon control protein
PA257_4707	SM00267	diguanylate cyclase
PA257_4710	SM00382	ATPases associated with a variety of cellular activities
PA257_4715	SM00382	ATPases associated with a variety of cellular activities
PA257_4715	SM00448	cheY-homologous receiver domain
PA257_4716	SM00091	PAS domain
PA257_4716	SM00387	Histidine kinase-like ATPases
PA257_4716	SM00388	His Kinase A (phosphoacceptor) domain
PA257_4717	SM00382	ATPases associated with a variety of cellular activities
PA257_4729	SM00822	PA257_4729
PA257_4735	SM00047	Lysozyme subfamily 2
PA257_4750	SM00382	ATPases associated with a variety of cellular activities
PA257_4751	SM00382	ATPases associated with a variety of cellular activities
PA257_4777	SM00491	PA257_4777
PA257_4787	SM00769	Water Stress and Hypersensitive response
PA257_4792	SM00953	PA257_4792
PA257_4800	SM00822	PA257_4800
PA257_4807	SM00881	CoA binding domain
PA257_4810	SM00346	helix_turn_helix isocitrate lyase regulation
PA257_4814	SM00849	Metallo-beta-lactamase superfamily
PA257_4816	SM01130	PA257_4816
PA257_4826	SM00849	Metallo-beta-lactamase superfamily
PA257_4850	SM00822	PA257_4850
PA257_4852	SM01007	Class II Aldolase and Adducin N-terminal domain
PA257_4855	SM00849	Metallo-beta-lactamase superfamily
PA257_4870	SM00382	ATPases associated with a variety of cellular activities
PA257_4871	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PA257_4876	SM00357	Cold shock protein domain
PA257_4897	SM00347	helix_turn_helix multiple antibiotic resistance protein
PA257_4906	SM00954	Region found in RelA / SpoT proteins
PA257_4910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_4910	SM00387	Histidine kinase-like ATPases
PA257_4910	SM00388	His Kinase A (phosphoacceptor) domain
PA257_4911	SM00448	cheY-homologous receiver domain
PA257_4911	SM00862	Transcriptional regulatory protein, C terminal
PA257_4912	SM00073	Histidine Phosphotransfer domain
PA257_4912	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_4912	SM00387	Histidine kinase-like ATPases
PA257_4912	SM00388	His Kinase A (phosphoacceptor) domain
PA257_4912	SM00448	cheY-homologous receiver domain
PA257_4926	SM00729	Elongator protein 3, MiaB family, Radical SAM
PA257_4929	SM00116	Domain in cystathionine beta-synthase and other proteins.
PA257_4929	SM00924	MgtE intracellular N domain
PA257_4936	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_4942	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
PA257_4952	SM00342	helix_turn_helix, arabinose operon control protein
PA257_4953	SM00382	ATPases associated with a variety of cellular activities
PA257_4957	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_4974	SM00091	PAS domain
PA257_4974	SM00382	ATPases associated with a variety of cellular activities
PA257_4984	SM00342	helix_turn_helix, arabinose operon control protein
PA257_4986	SM00829	Enoylreductase
PA257_4988	SM00052	Putative diguanylate phosphodiesterase
PA257_4988	SM00091	PAS domain
PA257_4988	SM00267	diguanylate cyclase
PA257_4989	SM00382	ATPases associated with a variety of cellular activities
PA257_4991	SM00450	Rhodanese Homology Domain
PA257_5002	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PA257_5002	SM00091	PAS domain
PA257_5002	SM00267	diguanylate cyclase
PA257_5002	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_5017	SM00563	Phosphate acyltransferases
PA257_5019	SM00849	Metallo-beta-lactamase superfamily
PA257_5020	SM00342	helix_turn_helix, arabinose operon control protein
PA257_5029	SM00232	JAB/MPN domain
PA257_5054	SM00382	ATPases associated with a variety of cellular activities
PA257_5055	SM00382	ATPases associated with a variety of cellular activities
PA257_5068	SM00421	helix_turn_helix, Lux Regulon
PA257_5083	SM00990	PA257_5083
PA257_5099	SM00644	PA257_5099
PA257_5107	SM00487	DEAD-like helicases superfamily
PA257_5107	SM00490	helicase superfamily c-terminal domain
PA257_5109	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_5109	SM00895	PA257_5109
PA257_5115	SM00342	helix_turn_helix, arabinose operon control protein
PA257_5129	SM00342	helix_turn_helix, arabinose operon control protein
PA257_5130	SM00382	ATPases associated with a variety of cellular activities
PA257_5130	SM00464	Found in ATP-dependent protease La (LON)
PA257_5139	SM00358	Double-stranded RNA binding motif
PA257_5139	SM00535	Ribonuclease III family
PA257_5143	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PA257_5153	SM00387	Histidine kinase-like ATPases
PA257_5153	SM00388	His Kinase A (phosphoacceptor) domain
PA257_5154	SM00448	cheY-homologous receiver domain
PA257_5154	SM00862	Transcriptional regulatory protein, C terminal
PA257_5160	SM00986	Uracil DNA glycosylase superfamily
PA257_5160	SM00987	UreE urease accessory protein, C-terminal domain 
PA257_5162	SM00342	helix_turn_helix, arabinose operon control protein
PA257_5170	SM00849	Metallo-beta-lactamase superfamily
PA257_5179	SM00363	S4 RNA-binding domain
PA257_5195	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
PA257_5195	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
PA257_5195	SM00493	PA257_5195
PA257_5208	SM00487	DEAD-like helicases superfamily
PA257_5236	SM00966	SpoVT / AbrB like domain 
PA257_5242	SM00857	Resolvase, N terminal domain
PA257_5245	SM00849	Metallo-beta-lactamase superfamily
PA257_5255	SM00052	Putative diguanylate phosphodiesterase
PA257_5257	SM00422	helix_turn_helix, mercury resistance
PA257_5261	SM00422	helix_turn_helix, mercury resistance
PA257_5268	SM00487	DEAD-like helicases superfamily
PA257_5268	SM00490	helicase superfamily c-terminal domain
PA257_5272	SM00382	ATPases associated with a variety of cellular activities
PA257_5300	SM00342	helix_turn_helix, arabinose operon control protein
PA257_5309	SM00560	LamG-like jellyroll fold domain
PA257_5314	SM00912	haemagglutination activity domain
PA257_5317	SM00382	ATPases associated with a variety of cellular activities
PA257_5329	SM00965	Secretin and TonB N terminus short domain
PA257_5334	SM00481	DNA polymerase alpha chain like domain
PA257_5349	SM00342	helix_turn_helix, arabinose operon control protein
PA257_5351	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_5354	SM00091	PAS domain
PA257_5354	SM00387	Histidine kinase-like ATPases
PA257_5354	SM00388	His Kinase A (phosphoacceptor) domain
PA257_5357	SM00421	helix_turn_helix, Lux Regulon
PA257_5357	SM00448	cheY-homologous receiver domain
PA257_5366	SM00858	PA257_5366
PA257_5368	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_5368	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_5369	SM00382	ATPases associated with a variety of cellular activities
PA257_5371	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_5371	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_5372	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_5372	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_5380	SM00479	PA257_5380
PA257_5386	SM00382	ATPases associated with a variety of cellular activities
PA257_5396	SM00267	diguanylate cyclase
PA257_5403	SM00155	Phospholipase D. Active site motifs.
PA257_5404	SM00867	YceI-like domain 
PA257_5405	SM00346	helix_turn_helix isocitrate lyase regulation
PA257_5409	SM00867	YceI-like domain 
PA257_5412	SM00849	Metallo-beta-lactamase superfamily
PA257_5415	SM00563	Phosphate acyltransferases
PA257_5418	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PA257_5423	SM00899	PA257_5423
PA257_5432	SM00052	Putative diguanylate phosphodiesterase
PA257_5432	SM00267	diguanylate cyclase
PA257_5445	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_5445	SM00387	Histidine kinase-like ATPases
PA257_5445	SM00388	His Kinase A (phosphoacceptor) domain
PA257_5446	SM00448	cheY-homologous receiver domain
PA257_5446	SM00862	Transcriptional regulatory protein, C terminal
PA257_5452	SM00883	Chaperonin 10 Kd subunit
PA257_5455	SM00822	PA257_5455
PA257_5462	SM00267	diguanylate cyclase
PA257_5462	SM00448	cheY-homologous receiver domain
PA257_5464	SM00091	PAS domain
PA257_5464	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_5464	SM00387	Histidine kinase-like ATPases
PA257_5464	SM00388	His Kinase A (phosphoacceptor) domain
PA257_5469	SM00957	SecA DEAD-like domain
PA257_5469	SM00958	SecA preprotein cross-linking domain
PA257_5474	SM00864	Tubulin/FtsZ family, GTPase domain
PA257_5474	SM00865	Tubulin/FtsZ family, C-terminal domain
PA257_5475	SM00842	Cell division protein FtsA
PA257_5493	SM00749	bacterial OsmY and nodulation domain
PA257_5503	SM00342	helix_turn_helix, arabinose operon control protein
PA257_5513	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PA257_5524	SM00382	ATPases associated with a variety of cellular activities
PA257_5525	SM00116	Domain in cystathionine beta-synthase and other proteins.
PA257_5529	SM00382	ATPases associated with a variety of cellular activities
PA257_5545	SM00316	Ribosomal protein S1-like RNA-binding domain
PA257_5553	SM00845	GatB domain
PA257_5558	SM01359	PA257_5558
PA257_5558	SM01360	PA257_5558
PA257_5562	SM00448	cheY-homologous receiver domain
PA257_5563	SM00387	Histidine kinase-like ATPases
PA257_5563	SM00388	His Kinase A (phosphoacceptor) domain
PA257_5568	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_5576	SM00382	ATPases associated with a variety of cellular activities
PA257_5577	SM00382	ATPases associated with a variety of cellular activities
PA257_5579	SM00344	helix_turn_helix ASNC type
PA257_5580	SM00797	Allophanate hydrolase subunit 2
PA257_5581	SM00796	Allophanate hydrolase subunit 1
PA257_5586	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
PA257_5587	SM00671	Sel1-like repeats.
PA257_5592	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_5592	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_5594	SM00644	PA257_5594
PA257_5615	SM00912	haemagglutination activity domain
PA257_5633	SM00470	ParB-like nuclease domain
PA257_5642	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
PA257_5642	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
PA257_5645	SM00487	DEAD-like helicases superfamily
PA257_5645	SM00490	helicase superfamily c-terminal domain
PA257_5670	SM00487	DEAD-like helicases superfamily
PA257_5717	SM00382	ATPases associated with a variety of cellular activities
PA257_5717	SM01086	C-terminal, D2-small domain, of ClpB protein
PA257_5722	SM00091	PAS domain
PA257_5722	SM00387	Histidine kinase-like ATPases
PA257_5722	SM00388	His Kinase A (phosphoacceptor) domain
PA257_5723	SM00382	ATPases associated with a variety of cellular activities
PA257_5723	SM00448	cheY-homologous receiver domain
PA257_5737	SM00904	Riboflavin kinase
PA257_5741	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
PA257_5757	SM00382	ATPases associated with a variety of cellular activities
PA257_5761	SM00244	prohibitin homologues
PA257_5767	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
PA257_5773	SM00382	ATPases associated with a variety of cellular activities
PA257_5774	SM00382	ATPases associated with a variety of cellular activities
PA257_5781	SM00052	Putative diguanylate phosphodiesterase
PA257_5781	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PA257_5781	SM00091	PAS domain
PA257_5781	SM00267	diguanylate cyclase
PA257_5784	SM00833	Cobalamin synthesis protein cobW C-terminal domain
PA257_5790	SM00382	ATPases associated with a variety of cellular activities
PA257_5793	SM00248	ankyrin repeats
PA257_5794	SM01060	PA257_5794
PA257_5809	SM00912	haemagglutination activity domain
PA257_5817	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_5817	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_5834	SM00972	Spore Coat Protein U domain
PA257_5835	SM00972	Spore Coat Protein U domain
PA257_5836	SM00972	Spore Coat Protein U domain
PA257_5839	SM00972	Spore Coat Protein U domain
PA257_5845	SM00422	helix_turn_helix, mercury resistance
PA257_5851	SM00937	PA257_5851
PA257_5853	SM00028	Tetratricopeptide repeats
PA257_5857	SM01400	PA257_5857
PA257_5879	SM00947	Carbonic anhydrase
PA257_5916	SM00100	Cyclic nucleotide-monophosphate binding domain
PA257_5918	SM00382	ATPases associated with a variety of cellular activities
PA257_5939	SM00091	PAS domain
PA257_5939	SM00387	Histidine kinase-like ATPases
PA257_5939	SM00388	His Kinase A (phosphoacceptor) domain
PA257_5940	SM00382	ATPases associated with a variety of cellular activities
PA257_5940	SM00448	cheY-homologous receiver domain
PA257_5953	SM00749	bacterial OsmY and nodulation domain
PA257_5954	SM00316	Ribosomal protein S1-like RNA-binding domain
PA257_5954	SM00322	K homology RNA-binding domain
PA257_5956	SM01387	PA257_5956
PA257_5960	SM00316	Ribosomal protein S1-like RNA-binding domain
PA257_5968	SM00382	ATPases associated with a variety of cellular activities
PA257_5970	SM01103	PA257_5970
PA257_5973	SM00851	MGS-like domain
PA257_5973	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PA257_5975	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
PA257_5977	SM00271	DnaJ molecular chaperone homology domain
PA257_5988	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_5988	SM00895	PA257_5988
PA257_5995	SM00448	cheY-homologous receiver domain
PA257_5995	SM00862	Transcriptional regulatory protein, C terminal
PA257_5996	SM00387	Histidine kinase-like ATPases
PA257_5996	SM00388	His Kinase A (phosphoacceptor) domain
PA257_5997	SM00422	helix_turn_helix, mercury resistance
PA257_6000	SM00090	RIO-like kinase
PA257_6001	SM00448	cheY-homologous receiver domain
PA257_6001	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PA257_6004	SM00344	helix_turn_helix ASNC type
PA257_6014	SM00382	ATPases associated with a variety of cellular activities
PA257_6058	SM00822	PA257_6058
PA257_6059	SM00342	helix_turn_helix, arabinose operon control protein
PA257_6078	SM00421	helix_turn_helix, Lux Regulon
PA257_6085	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
PA257_6099	SM00831	Cation transporter/ATPase, N-terminus
PA257_6106	SM00822	PA257_6106
PA257_6119	SM00267	diguanylate cyclase
PA257_6119	SM00448	cheY-homologous receiver domain
PA257_6120	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_6124	SM00878	Biotin carboxylase C-terminal domain
PA257_6124	SM01209	PA257_6124
PA257_6130	SM00798	AICARFT/IMPCHase bienzyme
PA257_6130	SM00851	MGS-like domain
PA257_6131	SM01209	PA257_6131
PA257_6131	SM01210	PA257_6131
PA257_6132	SM00387	Histidine kinase-like ATPases
PA257_6132	SM00388	His Kinase A (phosphoacceptor) domain
PA257_6132	SM00448	cheY-homologous receiver domain
PA257_6139	SM00382	ATPases associated with a variety of cellular activities
PA257_6156	SM00422	helix_turn_helix, mercury resistance
PA257_6156	SM00871	Bacterial transcription activator, effector binding domain
PA257_6163	SM00448	cheY-homologous receiver domain
PA257_6163	SM00862	Transcriptional regulatory protein, C terminal
PA257_6164	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_6164	SM00387	Histidine kinase-like ATPases
PA257_6164	SM00388	His Kinase A (phosphoacceptor) domain
PA257_6169	SM00988	UreE urease accessory protein, N-terminal domain
PA257_6171	SM00382	ATPases associated with a variety of cellular activities
PA257_6175	SM00965	Secretin and TonB N terminus short domain
PA257_6185	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_6185	SM00895	PA257_6185
PA257_6186	SM00822	PA257_6186
PA257_6188	SM00382	ATPases associated with a variety of cellular activities
PA257_6189	SM00382	ATPases associated with a variety of cellular activities
PA257_6194	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_6194	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_6203	SM00257	Lysin motif
PA257_6205	SM00460	Transglutaminase/protease-like homologues
PA257_6207	SM00729	Elongator protein 3, MiaB family, Radical SAM
PA257_6209	SM00267	diguanylate cyclase
PA257_6211	SM01005	Alanine racemase, C-terminal domain
PA257_6217	SM00967	RNA 2'-O ribose methyltransferase substrate binding
PA257_6218	SM00316	Ribosomal protein S1-like RNA-binding domain
PA257_6218	SM00357	Cold shock protein domain
PA257_6218	SM00955	PA257_6218
PA257_6221	SM00788	Adenylosuccinate synthetase
PA257_6224	SM00244	prohibitin homologues
PA257_6225	SM00244	prohibitin homologues
PA257_6229	SM00853	MutL C terminal dimerisation domain
PA257_6229	SM01340	PA257_6229
PA257_6230	SM00257	Lysin motif
PA257_6230	SM00646	PA257_6230
PA257_6234	SM00479	PA257_6234
PA257_6239	SM00450	Rhodanese Homology Domain
PA257_6242	SM00052	Putative diguanylate phosphodiesterase
PA257_6242	SM00267	diguanylate cyclase
PA257_6247	SM00434	DNA Topoisomerase IV
PA257_6250	SM00387	Histidine kinase-like ATPases
PA257_6250	SM00433	TopoisomeraseII
PA257_6263	SM00881	CoA binding domain
PA257_6268	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_6268	SM00387	Histidine kinase-like ATPases
PA257_6268	SM00388	His Kinase A (phosphoacceptor) domain
PA257_6268	SM00448	cheY-homologous receiver domain
PA257_6269	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_6270	SM00448	cheY-homologous receiver domain
PA257_6270	SM00862	Transcriptional regulatory protein, C terminal
PA257_6275	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_6285	SM00382	ATPases associated with a variety of cellular activities
PA257_6307	SM00052	Putative diguanylate phosphodiesterase
PA257_6307	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PA257_6307	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PA257_6307	SM00091	PAS domain
PA257_6307	SM00267	diguanylate cyclase
PA257_6312	SM01091	Transporter associated domain
PA257_6323	SM00342	helix_turn_helix, arabinose operon control protein
PA257_6331	SM00965	Secretin and TonB N terminus short domain
PA257_6335	SM00842	Cell division protein FtsA
PA257_6337	SM00919	Malic enzyme, NAD binding domain
PA257_6337	SM01274	PA257_6337
PA257_6339	SM00318	Staphylococcal nuclease homologues
PA257_6341	SM00487	DEAD-like helicases superfamily
PA257_6341	SM00490	helicase superfamily c-terminal domain
PA257_6342	SM00836	DALR anticodon binding domain
PA257_6342	SM01016	Arginyl tRNA synthetase N terminal dom
PA257_6345	SM00382	ATPases associated with a variety of cellular activities
PA257_6345	SM01086	C-terminal, D2-small domain, of ClpB protein
PA257_6364	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PA257_6364	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_6364	SM01358	PA257_6364
PA257_6366	SM00382	ATPases associated with a variety of cellular activities
PA257_6368	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_6368	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
PA257_6374	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_6378	SM00671	Sel1-like repeats.
PA257_6379	SM00671	Sel1-like repeats.
PA257_6380	SM00155	Phospholipase D. Active site motifs.
PA257_6385	SM00382	ATPases associated with a variety of cellular activities
PA257_6396	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_6396	SM00866	PA257_6396
PA257_6403	SM00869	Autotransporter beta-domain
PA257_6407	SM00422	helix_turn_helix, mercury resistance
PA257_6409	SM00981	PA257_6409
PA257_6411	SM01230	PA257_6411
PA257_6416	SM00091	PAS domain
PA257_6416	SM00387	Histidine kinase-like ATPases
PA257_6416	SM00388	His Kinase A (phosphoacceptor) domain
PA257_6417	SM00382	ATPases associated with a variety of cellular activities
PA257_6417	SM00448	cheY-homologous receiver domain
PA257_6423	SM00450	Rhodanese Homology Domain
PA257_6428	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PA257_6428	SM00245	tail specific protease
PA257_6431	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_6443	SM00478	endonuclease III
PA257_6449	SM00382	ATPases associated with a variety of cellular activities
PA257_6450	SM00062	Bacterial periplasmic substrate-binding proteins
PA257_6454	SM00347	helix_turn_helix multiple antibiotic resistance protein
PA257_6516	SM00387	Histidine kinase-like ATPases
PA257_6516	SM00388	His Kinase A (phosphoacceptor) domain
PA257_6517	SM00382	ATPases associated with a variety of cellular activities
PA257_6517	SM00448	cheY-homologous receiver domain
PA257_6525	SM00825	Beta-ketoacyl synthase
PA257_6529	SM00257	Lysin motif
PA257_6536	SM00830	Chorismate mutase type II
PA257_6547	SM00363	S4 RNA-binding domain
PA257_6551	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_6551	SM00387	Histidine kinase-like ATPases
PA257_6551	SM00388	His Kinase A (phosphoacceptor) domain
PA257_6552	SM00448	cheY-homologous receiver domain
PA257_6552	SM00862	Transcriptional regulatory protein, C terminal
PA257_6553	SM00316	Ribosomal protein S1-like RNA-binding domain
PA257_6553	SM00732	Likely ribonuclease with RNase H fold.
PA257_6561	SM01118	PA257_6561
PA257_6562	SM00382	ATPases associated with a variety of cellular activities
PA257_6576	SM01011	Aminopeptidase P, N-terminal domain
PA257_6584	SM00382	ATPases associated with a variety of cellular activities
PA257_6587	SM00829	Enoylreductase
PA257_6592	SM00357	Cold shock protein domain
PA257_6592	SM00382	ATPases associated with a variety of cellular activities
PA257_6592	SM00959	Rho termination factor, N-terminal domain
PA257_6597	SM01004	Delta-aminolevulinic acid dehydratase
PA257_6606	SM00382	ATPases associated with a variety of cellular activities
PA257_6616	SM00448	cheY-homologous receiver domain
PA257_6616	SM00850	LytTr DNA-binding domain
PA257_6631	SM01219	PA257_6631
PA257_6639	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_6645	SM00938	Nitrogen regulatory protein P-II
PA257_6647	SM00382	ATPases associated with a variety of cellular activities
PA257_6669	SM00382	ATPases associated with a variety of cellular activities
PA257_6678	SM00052	Putative diguanylate phosphodiesterase
PA257_6678	SM00267	diguanylate cyclase
PA257_6684	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_6685	SM01005	Alanine racemase, C-terminal domain
PA257_6691	SM00344	helix_turn_helix ASNC type
PA257_6693	SM00155	Phospholipase D. Active site motifs.
PA257_6709	SM00342	helix_turn_helix, arabinose operon control protein
PA257_6721	SM00072	Guanylate kinase homologues.
PA257_6722	SM01409	PA257_6722
PA257_6723	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PA257_6723	SM00954	Region found in RelA / SpoT proteins
PA257_6727	SM00342	helix_turn_helix, arabinose operon control protein
PA257_6731	SM00487	DEAD-like helicases superfamily
PA257_6731	SM00490	helicase superfamily c-terminal domain
PA257_6735	SM00411	bacterial (prokaryotic) histone like domain
PA257_6744	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_6744	SM00895	PA257_6744
PA257_6748	SM00448	cheY-homologous receiver domain
PA257_6748	SM00862	Transcriptional regulatory protein, C terminal
PA257_6749	SM00091	PAS domain
PA257_6749	SM00387	Histidine kinase-like ATPases
PA257_6749	SM00388	His Kinase A (phosphoacceptor) domain
PA257_6750	SM00116	Domain in cystathionine beta-synthase and other proteins.
PA257_6750	SM01091	Transporter associated domain
PA257_6752	SM00448	cheY-homologous receiver domain
PA257_6754	SM00382	ATPases associated with a variety of cellular activities
PA257_6771	SM00382	ATPases associated with a variety of cellular activities
PA257_6775	SM00342	helix_turn_helix, arabinose operon control protein
PA257_6789	SM00155	Phospholipase D. Active site motifs.
PA257_6792	SM00989	PA257_6792
PA257_6795	SM00893	Electron transfer flavoprotein domain
PA257_6796	SM00893	Electron transfer flavoprotein domain
PA257_6798	SM00530	Helix-turn-helix XRE-family like proteins 
PA257_6821	SM01001	AIR carboxylase
PA257_6823	SM00829	Enoylreductase
PA257_6828	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_6833	SM00878	Biotin carboxylase C-terminal domain
PA257_6841	SM00052	Putative diguanylate phosphodiesterase
PA257_6841	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PA257_6841	SM00091	PAS domain
PA257_6841	SM00267	diguanylate cyclase
PA257_6849	SM00382	ATPases associated with a variety of cellular activities
PA257_6884	SM00382	ATPases associated with a variety of cellular activities
PA257_6884	SM00448	cheY-homologous receiver domain
PA257_6885	SM00091	PAS domain
PA257_6885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PA257_6885	SM00387	Histidine kinase-like ATPases
PA257_6885	SM00388	His Kinase A (phosphoacceptor) domain
PA257_6886	SM00644	PA257_6886
PA257_6888	SM00267	diguanylate cyclase
PA257_6894	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
PA257_6894	SM00474	3'-5' exonuclease
PA257_6894	SM00475	5'-3' exonuclease
PA257_6894	SM00482	DNA polymerase A domain
PA257_6901	SM00382	ATPases associated with a variety of cellular activities
PA257_6904	SM00382	ATPases associated with a variety of cellular activities
PA257_6904	SM00930	PA257_6904
PA257_6909	SM01230	PA257_6909
PA257_6912	SM00382	ATPases associated with a variety of cellular activities
PA257_6912	SM00448	cheY-homologous receiver domain
PA257_6913	SM00387	Histidine kinase-like ATPases
PA257_6913	SM00388	His Kinase A (phosphoacceptor) domain
PA257_6923	SM00822	PA257_6923
PA257_6924	SM01230	PA257_6924
PA257_6927	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PA257_6927	SM00895	PA257_6927
PA257_6929	SM00860	SMI1 / KNR4 family
PA257_6930	SM00978	PA257_6930
PA257_6937	SM00833	Cobalamin synthesis protein cobW C-terminal domain
PA257_6940	SM00833	Cobalamin synthesis protein cobW C-terminal domain
PA257_6943	SM00646	PA257_6943
PA257_6955	SM00420	helix_turn_helix, Deoxyribose operon repressor
PA257_6955	SM01134	PA257_6955
PA257_6959	SM00382	ATPases associated with a variety of cellular activities
PA257_6967	SM00470	ParB-like nuclease domain
PA257_6970	SM01228	PA257_6970
